Query 015948
Match_columns 397
No_of_seqs 322 out of 2830
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 02:24:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015948.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015948hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0659 Cdk activating kinase 100.0 1.4E-75 3E-80 501.7 25.1 300 12-311 2-301 (318)
2 KOG0663 Protein kinase PITSLRE 100.0 3.1E-66 6.8E-71 456.9 24.9 304 10-313 74-383 (419)
3 KOG0593 Predicted protein kina 100.0 2.1E-67 4.6E-72 458.7 15.2 285 12-296 2-289 (396)
4 KOG0600 Cdc2-related protein k 100.0 3.7E-65 8E-70 472.1 25.9 302 6-308 111-417 (560)
5 KOG0661 MAPK related serine/th 100.0 4.5E-65 9.7E-70 468.4 21.4 289 8-298 6-298 (538)
6 KOG0615 Serine/threonine prote 100.0 1.2E-63 2.7E-68 451.6 17.1 270 6-301 166-447 (475)
7 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-61 2.5E-66 435.1 26.0 289 11-299 10-310 (323)
8 KOG0598 Ribosomal protein S6 k 100.0 3.2E-62 6.9E-67 439.1 20.8 271 11-311 24-301 (357)
9 KOG0575 Polo-like serine/threo 100.0 7.6E-61 1.7E-65 453.7 28.8 260 12-301 18-279 (592)
10 KOG0660 Mitogen-activated prot 100.0 2E-61 4.3E-66 432.3 18.2 292 9-301 19-320 (359)
11 KOG0592 3-phosphoinositide-dep 100.0 2.9E-59 6.2E-64 436.3 21.9 264 8-301 69-348 (604)
12 KOG0662 Cyclin-dependent kinas 100.0 1.2E-58 2.5E-63 376.2 18.6 286 12-297 2-289 (292)
13 KOG0581 Mitogen-activated prot 100.0 1.7E-58 3.6E-63 415.2 19.0 257 11-298 78-342 (364)
14 KOG0605 NDR and related serine 100.0 1.8E-57 4E-62 424.4 25.2 265 11-302 140-456 (550)
15 KOG0616 cAMP-dependent protein 100.0 3.3E-58 7.2E-63 400.2 18.3 260 10-302 42-308 (355)
16 KOG0658 Glycogen synthase kina 100.0 1.2E-57 2.6E-62 408.8 17.9 285 9-300 21-315 (364)
17 KOG0595 Serine/threonine-prote 100.0 5.6E-57 1.2E-61 408.7 21.1 262 9-298 7-275 (429)
18 KOG0694 Serine/threonine prote 100.0 1.1E-56 2.5E-61 430.0 21.4 310 10-349 366-688 (694)
19 KOG0033 Ca2+/calmodulin-depend 100.0 2.8E-58 6.1E-63 390.6 9.0 264 6-296 5-272 (355)
20 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.7E-55 1E-59 406.3 29.1 283 11-294 4-288 (288)
21 KOG0667 Dual-specificity tyros 100.0 6.4E-55 1.4E-59 417.6 28.0 288 7-301 181-512 (586)
22 KOG0666 Cyclin C-dependent kin 100.0 1.3E-56 2.8E-61 392.4 14.7 290 11-300 23-346 (438)
23 KOG0583 Serine/threonine prote 100.0 5.6E-55 1.2E-59 413.8 25.9 259 9-296 14-280 (370)
24 KOG0597 Serine-threonine prote 100.0 4.8E-56 1E-60 415.5 18.0 256 12-297 2-257 (808)
25 KOG0588 Serine/threonine prote 100.0 5.4E-55 1.2E-59 415.7 21.3 267 7-303 7-275 (786)
26 KOG0591 NIMA (never in mitosis 100.0 1.3E-56 2.8E-61 387.6 8.3 252 7-285 14-275 (375)
27 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-53 3.5E-58 398.8 28.7 287 11-298 4-295 (303)
28 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.9E-52 4.1E-57 392.7 27.8 287 11-298 5-293 (309)
29 cd07862 STKc_CDK6 Catalytic do 100.0 3E-52 6.5E-57 387.6 28.0 280 12-294 1-290 (290)
30 cd07848 STKc_CDKL5 Catalytic d 100.0 2E-52 4.4E-57 388.2 25.6 282 12-294 1-287 (287)
31 KOG0599 Phosphorylase kinase g 100.0 2.5E-54 5.4E-59 371.9 11.3 267 5-297 10-289 (411)
32 KOG0610 Putative serine/threon 100.0 6E-53 1.3E-57 382.7 20.8 264 11-301 76-402 (459)
33 KOG0198 MEKK and related serin 100.0 3.8E-53 8.2E-58 386.5 19.5 260 11-297 16-282 (313)
34 KOG0585 Ca2+/calmodulin-depend 100.0 2.1E-53 4.5E-58 391.0 17.8 264 7-297 92-378 (576)
35 KOG0578 p21-activated serine/t 100.0 2.3E-53 5E-58 399.7 18.4 258 11-298 272-530 (550)
36 KOG0032 Ca2+/calmodulin-depend 100.0 9.4E-52 2E-56 391.6 27.0 263 7-297 30-299 (382)
37 KOG0580 Serine/threonine prote 100.0 2E-53 4.4E-58 360.1 13.5 256 10-296 20-278 (281)
38 PTZ00036 glycogen synthase kin 100.0 1.2E-51 2.6E-56 404.4 25.5 280 10-298 64-358 (440)
39 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2E-51 4.4E-56 390.3 25.8 286 13-299 1-298 (338)
40 cd07841 STKc_CDK7 Catalytic do 100.0 6.2E-51 1.4E-55 380.2 28.3 292 13-304 1-295 (298)
41 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.3E-51 1.4E-55 380.9 28.3 287 11-298 5-293 (301)
42 cd07839 STKc_CDK5 Catalytic do 100.0 2.4E-51 5.1E-56 380.3 25.2 282 13-294 1-284 (284)
43 cd07863 STKc_CDK4 Catalytic do 100.0 8.5E-51 1.8E-55 377.4 28.4 279 13-294 1-288 (288)
44 KOG0582 Ste20-like serine/thre 100.0 2E-51 4.3E-56 375.7 23.1 269 11-298 25-300 (516)
45 PTZ00263 protein kinase A cata 100.0 5.2E-51 1.1E-55 386.2 25.6 260 8-300 14-280 (329)
46 cd07845 STKc_CDK10 Catalytic d 100.0 3.4E-50 7.3E-55 377.4 29.7 294 11-304 6-303 (309)
47 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-50 3.6E-55 374.7 27.3 282 13-294 1-285 (285)
48 KOG0669 Cyclin T-dependent kin 100.0 2.6E-53 5.7E-58 361.8 6.7 291 10-300 15-324 (376)
49 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-50 2.4E-55 383.0 25.3 253 18-300 1-260 (323)
50 KOG1290 Serine/threonine prote 100.0 2.7E-51 5.8E-56 378.0 20.4 278 5-300 70-559 (590)
51 cd07876 STKc_JNK2 Catalytic do 100.0 4.9E-50 1.1E-54 384.1 29.1 283 9-296 18-320 (359)
52 KOG0589 Serine/threonine prote 100.0 1.1E-51 2.4E-56 386.1 17.1 257 11-295 3-262 (426)
53 cd05631 STKc_GRK4 Catalytic do 100.0 2E-50 4.3E-55 374.6 24.9 263 13-301 1-271 (285)
54 cd05612 STKc_PRKX_like Catalyt 100.0 8.9E-51 1.9E-55 378.1 22.3 256 12-300 1-263 (291)
55 cd07853 STKc_NLK Catalytic dom 100.0 8.5E-51 1.8E-55 391.2 22.5 286 13-299 1-296 (372)
56 PHA03212 serine/threonine kina 100.0 3.2E-50 6.9E-55 388.5 25.8 279 11-299 91-384 (391)
57 cd05628 STKc_NDR1 Catalytic do 100.0 5.9E-50 1.3E-54 384.1 27.5 263 12-301 1-303 (363)
58 cd05601 STKc_CRIK Catalytic do 100.0 1.9E-50 4.1E-55 382.6 23.8 264 12-300 1-272 (330)
59 KOG0611 Predicted serine/threo 100.0 1.1E-51 2.4E-56 372.8 14.2 257 8-295 49-307 (668)
60 cd07875 STKc_JNK1 Catalytic do 100.0 9.5E-50 2.1E-54 382.9 28.5 284 9-297 21-324 (364)
61 cd05599 STKc_NDR_like Catalyti 100.0 6.6E-50 1.4E-54 384.0 27.4 261 12-299 1-304 (364)
62 KOG4717 Serine/threonine prote 100.0 4.2E-51 9.2E-56 378.5 17.9 263 8-299 14-278 (864)
63 cd05626 STKc_LATS2 Catalytic d 100.0 6.4E-50 1.4E-54 386.2 26.2 262 13-300 2-314 (381)
64 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.1E-50 6.6E-55 383.2 22.6 284 9-297 12-304 (343)
65 cd07874 STKc_JNK3 Catalytic do 100.0 1.7E-49 3.7E-54 379.9 27.1 284 9-297 14-317 (355)
66 cd05589 STKc_PKN Catalytic dom 100.0 2E-49 4.4E-54 374.6 27.1 255 14-299 1-265 (324)
67 cd07837 STKc_CdkB_plant Cataly 100.0 2.4E-49 5.2E-54 368.9 27.2 284 12-295 1-295 (295)
68 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.3E-50 1.6E-54 381.6 23.8 262 12-300 1-294 (350)
69 cd07832 STKc_CCRK Catalytic do 100.0 2.7E-49 5.9E-54 366.7 26.8 283 13-295 1-286 (286)
70 PTZ00426 cAMP-dependent protei 100.0 6.1E-50 1.3E-54 380.1 22.9 258 10-300 28-293 (340)
71 cd05625 STKc_LATS1 Catalytic d 100.0 5.8E-50 1.3E-54 386.8 23.2 261 13-300 2-314 (382)
72 cd05590 STKc_nPKC_eta Catalyti 100.0 2.6E-49 5.7E-54 373.1 26.7 252 18-299 1-261 (320)
73 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-49 3.1E-54 383.4 25.3 261 12-299 1-313 (377)
74 cd07868 STKc_CDK8 Catalytic do 100.0 1.9E-49 4.2E-54 373.6 25.3 274 17-294 6-317 (317)
75 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.1E-49 2.4E-54 377.8 23.6 263 12-299 1-265 (333)
76 cd05570 STKc_PKC Catalytic dom 100.0 3.4E-49 7.5E-54 372.0 26.3 253 18-300 1-261 (318)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 8.5E-50 1.8E-54 377.7 22.2 252 18-299 1-259 (328)
78 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-48 2.9E-53 362.0 29.6 283 12-294 1-286 (286)
79 cd05621 STKc_ROCK2 Catalytic d 100.0 2.8E-49 6.1E-54 379.7 25.9 264 10-299 41-312 (370)
80 cd05587 STKc_cPKC Catalytic do 100.0 5.8E-49 1.3E-53 371.5 27.6 257 13-299 1-265 (324)
81 cd05596 STKc_ROCK Catalytic do 100.0 3.5E-49 7.5E-54 379.3 26.4 264 10-299 41-312 (370)
82 cd05616 STKc_cPKC_beta Catalyt 100.0 3.3E-49 7.2E-54 373.0 25.9 258 13-300 1-266 (323)
83 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-49 2.3E-54 376.2 22.4 252 18-299 1-259 (323)
84 cd05598 STKc_LATS Catalytic do 100.0 1.3E-49 2.8E-54 383.6 23.3 261 12-299 1-309 (376)
85 PTZ00024 cyclin-dependent prot 100.0 7.9E-49 1.7E-53 372.3 28.3 295 7-302 3-324 (335)
86 cd07844 STKc_PCTAIRE_like Cata 100.0 9.7E-49 2.1E-53 364.2 28.1 283 11-294 4-291 (291)
87 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-49 2.6E-54 374.2 22.0 249 20-298 1-254 (312)
88 cd05591 STKc_nPKC_epsilon Cata 100.0 5.1E-49 1.1E-53 371.4 26.4 252 18-299 1-262 (321)
89 cd07860 STKc_CDK2_3 Catalytic 100.0 3.9E-49 8.4E-54 365.5 25.0 282 13-294 1-284 (284)
90 cd05627 STKc_NDR2 Catalytic do 100.0 2.4E-49 5.1E-54 379.5 24.1 263 12-301 1-303 (360)
91 cd05592 STKc_nPKC_theta_delta 100.0 1E-48 2.2E-53 368.4 27.3 252 18-299 1-256 (316)
92 KOG0690 Serine/threonine prote 100.0 3.9E-51 8.4E-56 359.9 9.7 264 9-302 165-435 (516)
93 PLN00009 cyclin-dependent kina 100.0 1.7E-48 3.6E-53 363.2 27.6 286 12-297 2-290 (294)
94 cd07843 STKc_CDC2L1 Catalytic 100.0 7.3E-49 1.6E-53 365.5 25.1 284 11-294 4-293 (293)
95 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-48 2.7E-53 369.9 27.1 253 18-299 1-270 (329)
96 cd05620 STKc_nPKC_delta Cataly 100.0 1.3E-48 2.8E-53 367.7 26.9 252 18-299 1-256 (316)
97 cd05594 STKc_PKB_alpha Catalyt 100.0 3E-49 6.5E-54 373.6 22.4 252 18-299 1-260 (325)
98 KOG0201 Serine/threonine prote 100.0 2.4E-51 5.3E-56 374.8 7.4 258 11-298 12-270 (467)
99 KOG0986 G protein-coupled rece 100.0 2.4E-50 5.1E-55 368.7 13.6 269 10-304 183-459 (591)
100 cd05614 STKc_MSK2_N N-terminal 100.0 6.3E-49 1.4E-53 372.5 23.7 262 13-299 1-275 (332)
101 cd05597 STKc_DMPK_like Catalyt 100.0 2E-48 4.3E-53 368.9 27.1 265 12-299 1-274 (331)
102 cd05608 STKc_GRK1 Catalytic do 100.0 1.4E-48 3.1E-53 361.3 25.0 256 20-300 1-266 (280)
103 PTZ00284 protein kinase; Provi 100.0 8.2E-49 1.8E-53 388.1 24.8 276 11-297 128-444 (467)
104 KOG0612 Rho-associated, coiled 100.0 5.9E-50 1.3E-54 400.2 15.7 266 11-302 74-349 (1317)
105 cd07866 STKc_BUR1 Catalytic do 100.0 3.5E-48 7.6E-53 363.5 26.7 285 10-294 6-311 (311)
106 cd05584 STKc_p70S6K Catalytic 100.0 1.4E-48 3E-53 368.7 23.7 253 17-299 1-264 (323)
107 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-47 2.4E-52 357.2 29.4 283 11-294 4-291 (291)
108 cd05582 STKc_RSK_N N-terminal 100.0 6.7E-49 1.5E-53 370.1 21.4 253 17-299 1-262 (318)
109 cd05622 STKc_ROCK1 Catalytic d 100.0 2.5E-48 5.4E-53 373.4 25.7 264 10-299 41-312 (371)
110 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-48 2.3E-53 369.6 22.5 252 18-299 1-259 (323)
111 cd05605 STKc_GRK4_like Catalyt 100.0 3.4E-48 7.4E-53 359.7 25.4 263 13-301 1-271 (285)
112 PLN00034 mitogen-activated pro 100.0 2.2E-48 4.8E-53 371.8 24.2 257 11-297 73-334 (353)
113 cd07836 STKc_Pho85 Catalytic d 100.0 5.3E-48 1.2E-52 357.8 25.7 281 13-294 1-284 (284)
114 cd05618 STKc_aPKC_iota Catalyt 100.0 4.4E-48 9.6E-53 366.1 25.7 253 18-299 1-270 (329)
115 cd05615 STKc_cPKC_alpha Cataly 100.0 6.2E-48 1.3E-52 364.2 26.2 257 13-299 1-265 (323)
116 cd07835 STKc_CDK1_like Catalyt 100.0 5.6E-48 1.2E-52 357.5 25.4 281 14-294 1-283 (283)
117 cd05619 STKc_nPKC_theta Cataly 100.0 1E-47 2.3E-52 361.5 27.5 253 18-300 1-257 (316)
118 cd05623 STKc_MRCK_alpha Cataly 100.0 7E-48 1.5E-52 365.3 26.1 266 12-300 1-275 (332)
119 cd07867 STKc_CDC2L6 Catalytic 100.0 1.1E-47 2.3E-52 361.6 27.1 274 17-294 6-317 (317)
120 cd07865 STKc_CDK9 Catalytic do 100.0 1.4E-47 3.1E-52 359.2 27.9 285 10-294 10-310 (310)
121 cd06649 PKc_MEK2 Catalytic dom 100.0 9E-48 1.9E-52 364.4 26.7 282 11-298 4-308 (331)
122 cd05624 STKc_MRCK_beta Catalyt 100.0 4.9E-48 1.1E-52 366.2 24.9 266 12-300 1-275 (331)
123 KOG0192 Tyrosine kinase specif 100.0 5.3E-48 1.2E-52 363.0 24.7 252 11-290 40-298 (362)
124 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.3E-48 2E-52 363.6 26.5 254 18-300 1-269 (327)
125 cd05603 STKc_SGK2 Catalytic do 100.0 4.2E-48 9.1E-53 365.2 23.9 252 18-299 1-259 (321)
126 cd05602 STKc_SGK1 Catalytic do 100.0 2.8E-48 6.2E-53 366.9 22.2 252 18-299 1-259 (325)
127 PHA03209 serine/threonine kina 100.0 6.1E-48 1.3E-52 369.1 24.3 275 11-296 65-356 (357)
128 cd07864 STKc_CDK12 Catalytic d 100.0 2.4E-47 5.3E-52 356.6 27.8 287 8-294 3-302 (302)
129 cd07846 STKc_CDKL2_3 Catalytic 100.0 8.4E-48 1.8E-52 356.8 24.5 283 12-294 1-286 (286)
130 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.5E-48 1.9E-52 365.5 24.8 288 10-298 3-298 (337)
131 cd05604 STKc_SGK3 Catalytic do 100.0 5.5E-48 1.2E-52 365.0 22.7 252 18-299 1-259 (325)
132 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-48 3.3E-53 369.6 18.5 252 20-299 1-261 (330)
133 cd07833 STKc_CDKL Catalytic do 100.0 3.9E-47 8.5E-52 352.6 26.7 283 12-294 1-288 (288)
134 PHA03207 serine/threonine kina 100.0 1.7E-47 3.6E-52 370.6 25.1 283 7-299 87-383 (392)
135 PHA03211 serine/threonine kina 100.0 2.8E-47 6E-52 372.9 26.6 275 11-296 168-460 (461)
136 KOG0579 Ste20-like serine/thre 100.0 1.9E-49 4.1E-54 375.0 10.8 261 11-298 31-296 (1187)
137 cd05118 STKc_CMGC Catalytic do 100.0 2.8E-47 6.1E-52 352.5 24.1 281 14-294 1-283 (283)
138 cd07842 STKc_CDK8_like Catalyt 100.0 3.7E-47 8.1E-52 357.5 25.0 282 13-294 1-316 (316)
139 cd07855 STKc_ERK5 Catalytic do 100.0 2.9E-47 6.2E-52 361.4 24.3 290 10-300 3-303 (334)
140 cd07849 STKc_ERK1_2_like Catal 100.0 3.8E-47 8.2E-52 360.9 25.0 287 10-299 3-300 (336)
141 KOG4236 Serine/threonine prote 100.0 6.2E-49 1.3E-53 364.9 12.2 260 10-297 560-825 (888)
142 KOG0574 STE20-like serine/thre 100.0 2E-50 4.3E-55 352.2 2.1 263 8-300 29-292 (502)
143 PTZ00266 NIMA-related protein 100.0 1.9E-46 4.2E-51 384.7 31.6 267 5-299 6-303 (1021)
144 PF00069 Pkinase: Protein kina 100.0 8.5E-48 1.8E-52 351.4 18.9 259 14-294 1-260 (260)
145 PTZ00283 serine/threonine prot 100.0 4.7E-47 1E-51 376.4 25.6 261 8-296 28-302 (496)
146 cd07834 STKc_MAPK Catalytic do 100.0 4.2E-47 9.1E-52 359.6 23.8 287 13-300 1-298 (330)
147 cd07829 STKc_CDK_like Catalyti 100.0 6.5E-47 1.4E-51 349.9 23.8 281 14-294 1-282 (282)
148 KOG0607 MAP kinase-interacting 100.0 2.4E-48 5.2E-53 341.6 13.2 265 7-298 72-368 (463)
149 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-46 2.3E-51 360.3 25.5 284 9-297 13-317 (353)
150 cd05607 STKc_GRK7 Catalytic do 100.0 1.1E-46 2.4E-51 348.0 24.7 257 20-301 1-264 (277)
151 KOG0671 LAMMER dual specificit 100.0 2.2E-48 4.8E-53 349.7 12.6 283 6-297 83-412 (415)
152 cd06650 PKc_MEK1 Catalytic dom 100.0 1E-46 2.2E-51 357.3 24.7 281 11-298 4-306 (333)
153 cd07840 STKc_CDK9_like Catalyt 100.0 1.8E-46 4E-51 347.6 25.7 281 14-294 1-287 (287)
154 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-46 2.8E-51 349.1 24.3 261 13-299 1-269 (285)
155 cd07831 STKc_MOK Catalytic dom 100.0 1.7E-46 3.8E-51 347.1 24.9 277 14-294 1-282 (282)
156 cd08223 STKc_Nek4 Catalytic do 100.0 5.3E-46 1.2E-50 339.2 27.6 254 13-294 1-257 (257)
157 KOG0604 MAP kinase-activated p 100.0 3.2E-48 7E-53 338.1 12.1 257 9-298 58-329 (400)
158 KOG0696 Serine/threonine prote 100.0 4.6E-48 9.9E-53 350.0 13.4 311 11-351 348-672 (683)
159 PTZ00267 NIMA-related protein 100.0 2.3E-46 5E-51 371.0 26.0 256 11-296 66-328 (478)
160 cd06644 STKc_STK10_LOK Catalyt 100.0 3.8E-46 8.3E-51 347.0 25.9 263 10-299 10-277 (292)
161 cd05632 STKc_GRK5 Catalytic do 100.0 3.9E-46 8.5E-51 345.8 25.8 262 13-300 1-270 (285)
162 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.5E-46 7.5E-51 355.1 25.6 285 10-298 3-307 (342)
163 cd08529 STKc_FA2-like Catalyti 100.0 9.7E-46 2.1E-50 337.1 26.7 254 13-294 1-256 (256)
164 cd06625 STKc_MEKK3_like Cataly 100.0 7.3E-46 1.6E-50 339.5 25.9 255 12-294 2-263 (263)
165 cd07852 STKc_MAPK15 Catalytic 100.0 1.9E-46 4.1E-51 356.3 22.6 291 7-299 2-303 (337)
166 cd06611 STKc_SLK_like Catalyti 100.0 3.1E-46 6.7E-51 345.4 23.2 260 11-297 4-268 (280)
167 cd08227 PK_STRAD_alpha Pseudok 100.0 6.3E-46 1.4E-50 351.3 24.1 281 16-296 2-312 (327)
168 cd07851 STKc_p38 Catalytic dom 100.0 3.2E-46 6.9E-51 355.5 22.2 287 9-300 12-307 (343)
169 cd07879 STKc_p38delta_MAPK13 C 100.0 6.3E-46 1.4E-50 353.3 24.2 283 10-298 13-304 (342)
170 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.4E-46 1.2E-50 353.3 23.5 252 11-290 6-329 (338)
171 cd08218 STKc_Nek1 Catalytic do 100.0 1.6E-45 3.6E-50 335.9 25.4 254 13-294 1-256 (256)
172 cd06643 STKc_SLK Catalytic dom 100.0 1.1E-45 2.5E-50 342.1 24.6 259 12-297 5-268 (282)
173 KOG0577 Serine/threonine prote 100.0 6.6E-47 1.4E-51 355.6 15.7 258 12-299 26-286 (948)
174 cd06645 STKc_MAP4K3 Catalytic 100.0 1.3E-45 2.7E-50 338.9 24.0 257 11-293 8-267 (267)
175 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-45 2.8E-50 351.3 24.8 285 10-299 13-306 (343)
176 cd07838 STKc_CDK4_6_like Catal 100.0 3.3E-45 7.1E-50 339.3 26.9 278 14-294 1-287 (287)
177 cd06654 STKc_PAK1 Catalytic do 100.0 2.8E-45 6.1E-50 342.0 26.4 257 10-296 18-275 (296)
178 KOG0197 Tyrosine kinases [Sign 100.0 3.1E-46 6.7E-51 350.7 19.7 247 12-290 206-456 (468)
179 cd06619 PKc_MKK5 Catalytic dom 100.0 2E-45 4.3E-50 340.0 24.8 256 12-297 1-259 (279)
180 cd08221 STKc_Nek9 Catalytic do 100.0 5.8E-45 1.3E-49 332.3 27.5 254 13-294 1-256 (256)
181 cd05574 STKc_phototropin_like 100.0 3E-45 6.6E-50 344.8 26.4 265 12-303 1-301 (316)
182 cd06656 STKc_PAK3 Catalytic do 100.0 2.1E-45 4.6E-50 342.9 24.9 260 9-298 16-276 (297)
183 cd07877 STKc_p38alpha_MAPK14 C 100.0 2E-45 4.4E-50 350.2 25.3 285 10-299 15-308 (345)
184 cd06637 STKc_TNIK Catalytic do 100.0 3.2E-45 7E-50 337.0 25.7 256 10-294 4-272 (272)
185 cd07857 STKc_MPK1 Catalytic do 100.0 3.1E-45 6.8E-50 347.2 26.3 286 13-299 1-300 (332)
186 cd05580 STKc_PKA Catalytic dom 100.0 2.4E-45 5.3E-50 341.3 24.9 255 12-299 1-262 (290)
187 cd06609 STKc_MST3_like Catalyt 100.0 2.6E-45 5.6E-50 338.2 24.6 256 12-297 1-257 (274)
188 cd06646 STKc_MAP4K5 Catalytic 100.0 2.6E-45 5.6E-50 336.8 24.5 261 7-293 4-267 (267)
189 KOG4279 Serine/threonine prote 100.0 4.4E-46 9.5E-51 355.4 19.8 265 7-298 565-839 (1226)
190 KOG0596 Dual specificity; seri 100.0 3E-46 6.6E-51 349.3 18.4 261 11-299 360-635 (677)
191 cd06655 STKc_PAK2 Catalytic do 100.0 6.5E-45 1.4E-49 339.5 27.5 258 11-298 18-276 (296)
192 cd07830 STKc_MAK_like Catalyti 100.0 2.8E-45 6E-50 339.4 24.2 279 14-294 1-283 (283)
193 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 8.1E-45 1.8E-49 343.6 27.6 286 10-300 8-297 (328)
194 cd06613 STKc_MAP4K3_like Catal 100.0 5.5E-45 1.2E-49 333.3 25.6 258 11-293 2-262 (262)
195 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.9E-45 1.1E-49 334.9 25.2 253 13-294 1-267 (267)
196 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.2E-45 9.1E-50 338.2 24.9 258 12-297 1-267 (283)
197 cd06615 PKc_MEK Catalytic doma 100.0 3.4E-45 7.3E-50 343.4 24.3 277 12-297 1-293 (308)
198 cd06612 STKc_MST1_2 Catalytic 100.0 3.6E-45 7.9E-50 333.4 23.8 253 12-294 3-256 (256)
199 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.7E-45 1.7E-49 333.2 25.6 260 12-294 1-267 (267)
200 KOG0586 Serine/threonine prote 100.0 3.3E-46 7.2E-51 354.4 16.8 258 10-297 54-312 (596)
201 KOG0668 Casein kinase II, alph 100.0 1.3E-46 2.8E-51 316.7 12.0 276 11-296 37-327 (338)
202 PHA03210 serine/threonine kina 100.0 1.2E-45 2.7E-50 367.2 21.1 290 7-298 143-461 (501)
203 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-45 5.3E-50 341.7 21.3 263 9-301 19-282 (292)
204 cd08217 STKc_Nek2 Catalytic do 100.0 9.7E-45 2.1E-49 331.8 24.9 254 13-294 1-265 (265)
205 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-44 2.9E-49 329.8 25.0 250 13-291 1-252 (255)
206 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.8E-45 1.5E-49 337.5 22.9 259 12-297 1-268 (286)
207 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.6E-44 3.4E-49 334.3 24.9 256 10-294 14-282 (282)
208 cd08220 STKc_Nek8 Catalytic do 100.0 3.2E-44 6.9E-49 327.2 26.2 253 13-294 1-256 (256)
209 cd06608 STKc_myosinIII_like Ca 100.0 2E-44 4.4E-49 331.7 24.8 257 10-294 4-275 (275)
210 cd06638 STKc_myosinIIIA Cataly 100.0 3.3E-44 7.2E-49 332.8 25.8 259 8-294 14-286 (286)
211 cd06631 STKc_YSK4 Catalytic do 100.0 4.3E-44 9.2E-49 328.3 26.2 254 13-294 1-265 (265)
212 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-44 3.9E-49 331.2 23.6 258 13-295 1-268 (268)
213 cd05609 STKc_MAST Catalytic do 100.0 3.6E-44 7.9E-49 335.9 26.1 261 12-299 1-281 (305)
214 cd06639 STKc_myosinIIIB Cataly 100.0 6.2E-44 1.4E-48 331.9 27.4 258 10-295 20-291 (291)
215 cd05064 PTKc_EphR_A10 Catalyti 100.0 2E-44 4.4E-49 330.9 23.8 251 11-290 4-260 (266)
216 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-44 2.6E-49 337.8 22.6 261 12-302 21-282 (297)
217 cd06607 STKc_TAO Catalytic dom 100.0 3.6E-44 7.7E-49 336.2 25.5 260 8-297 11-273 (307)
218 cd05096 PTKc_DDR1 Catalytic do 100.0 3.9E-44 8.4E-49 335.5 25.5 258 11-290 4-300 (304)
219 cd05106 PTKc_CSF-1R Catalytic 100.0 1.9E-44 4E-49 346.9 23.8 252 11-290 37-367 (374)
220 cd05633 STKc_GRK3 Catalytic do 100.0 4.6E-44 1E-48 330.9 25.5 251 19-299 1-263 (279)
221 cd08225 STKc_Nek5 Catalytic do 100.0 3E-44 6.5E-49 327.5 23.9 254 13-294 1-257 (257)
222 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-44 2.9E-49 330.3 21.3 252 13-294 1-258 (258)
223 cd06632 STKc_MEKK1_plant Catal 100.0 7.4E-44 1.6E-48 325.0 26.0 254 13-294 1-258 (258)
224 cd06651 STKc_MEKK3 Catalytic d 100.0 6E-44 1.3E-48 327.7 25.4 255 12-295 2-265 (266)
225 KOG1989 ARK protein kinase fam 100.0 2.8E-45 6.1E-50 361.8 17.4 249 11-291 36-307 (738)
226 cd06640 STKc_MST4 Catalytic do 100.0 3.1E-44 6.7E-49 331.7 23.1 257 11-298 3-260 (277)
227 KOG0608 Warts/lats-like serine 100.0 2.4E-45 5.2E-50 347.4 15.4 264 11-301 628-938 (1034)
228 cd05104 PTKc_Kit Catalytic dom 100.0 4.5E-44 9.8E-49 344.5 24.7 253 11-291 34-370 (375)
229 cd05577 STKc_GRK Catalytic dom 100.0 5.1E-44 1.1E-48 330.2 23.9 256 20-301 1-264 (277)
230 cd06917 STKc_NAK1_like Catalyt 100.0 6.3E-44 1.4E-48 329.4 24.4 257 13-298 2-262 (277)
231 cd06605 PKc_MAPKK Catalytic do 100.0 1.7E-44 3.7E-49 330.7 20.3 257 12-296 1-262 (265)
232 cd06626 STKc_MEKK4 Catalytic d 100.0 1.5E-43 3.3E-48 324.2 26.4 257 13-294 1-264 (264)
233 cd06652 STKc_MEKK2 Catalytic d 100.0 1.6E-43 3.4E-48 324.7 26.3 255 12-295 2-265 (265)
234 cd06616 PKc_MKK4 Catalytic dom 100.0 4.4E-44 9.5E-49 332.4 22.9 261 12-296 4-272 (288)
235 KOG0614 cGMP-dependent protein 100.0 2.1E-46 4.6E-51 346.8 7.1 266 11-305 419-691 (732)
236 cd05606 STKc_beta_ARK Catalyti 100.0 9.2E-44 2E-48 328.8 24.9 253 19-299 1-263 (278)
237 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-44 2.5E-49 334.4 18.7 256 10-296 2-258 (277)
238 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.3E-43 2.8E-48 326.4 25.5 259 13-294 2-272 (272)
239 cd06648 STKc_PAK_II Catalytic 100.0 2.1E-43 4.6E-48 327.5 27.0 259 11-299 18-277 (285)
240 cd08215 STKc_Nek Catalytic dom 100.0 1.6E-43 3.5E-48 322.3 25.7 254 13-294 1-258 (258)
241 cd06633 STKc_TAO3 Catalytic do 100.0 2.8E-43 6E-48 331.1 27.5 261 8-298 17-280 (313)
242 cd06647 STKc_PAK_I Catalytic d 100.0 7E-44 1.5E-48 332.1 22.8 258 11-298 18-276 (293)
243 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-43 3.2E-48 324.2 24.2 251 20-299 1-260 (262)
244 KOG0983 Mitogen-activated prot 100.0 6.9E-45 1.5E-49 313.7 14.3 258 12-296 92-354 (391)
245 KOG0695 Serine/threonine prote 100.0 1.1E-44 2.5E-49 320.4 15.9 311 11-350 249-581 (593)
246 cd06623 PKc_MAPKK_plant_like C 100.0 2E-43 4.3E-48 323.3 24.8 256 12-297 1-262 (264)
247 cd05048 PTKc_Ror Catalytic Dom 100.0 1E-43 2.2E-48 329.0 23.0 252 11-291 4-279 (283)
248 PHA03390 pk1 serine/threonine- 100.0 3.3E-43 7.1E-48 323.1 26.2 249 10-296 12-267 (267)
249 KOG0603 Ribosomal protein S6 k 100.0 1.9E-44 4E-49 344.2 18.4 245 9-294 319-566 (612)
250 cd06624 STKc_ASK Catalytic dom 100.0 3.5E-43 7.7E-48 322.9 26.2 254 14-294 10-268 (268)
251 cd08228 STKc_Nek6 Catalytic do 100.0 2.7E-43 5.9E-48 323.2 25.4 253 12-290 2-260 (267)
252 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-43 3.5E-48 328.0 24.1 260 11-297 4-272 (284)
253 cd06635 STKc_TAO1 Catalytic do 100.0 3.6E-43 7.9E-48 330.9 26.7 258 9-296 22-282 (317)
254 cd05061 PTKc_InsR Catalytic do 100.0 3.5E-43 7.6E-48 326.5 25.7 260 10-298 4-287 (288)
255 PHA02988 hypothetical protein; 100.0 2.6E-43 5.6E-48 326.6 24.7 247 12-290 18-274 (283)
256 cd06641 STKc_MST3 Catalytic do 100.0 2.7E-43 5.8E-48 325.4 24.8 256 11-297 3-259 (277)
257 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.8E-43 8.3E-48 320.4 25.3 247 12-290 4-253 (256)
258 cd06627 STKc_Cdc7_like Catalyt 100.0 5.5E-43 1.2E-47 318.3 26.1 253 13-294 1-254 (254)
259 cd05611 STKc_Rim15_like Cataly 100.0 2.5E-43 5.5E-48 322.3 23.2 252 18-299 2-259 (260)
260 cd05084 PTKc_Fes Catalytic dom 100.0 3E-43 6.5E-48 320.3 23.4 244 18-290 1-248 (252)
261 cd05033 PTKc_EphR Catalytic do 100.0 4.8E-43 1E-47 321.7 24.8 252 11-291 3-261 (266)
262 cd06634 STKc_TAO2 Catalytic do 100.0 4.5E-43 9.8E-48 329.0 25.1 261 7-297 10-273 (308)
263 cd06614 STKc_PAK Catalytic dom 100.0 4.3E-43 9.3E-48 325.5 24.5 262 8-298 15-277 (286)
264 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.6E-43 2.1E-47 323.4 26.8 261 12-297 1-272 (287)
265 KOG0664 Nemo-like MAPK-related 100.0 2.2E-46 4.7E-51 323.0 1.6 286 12-298 53-350 (449)
266 KOG2345 Serine/threonine prote 100.0 3.4E-44 7.4E-49 305.5 14.9 255 11-291 20-296 (302)
267 KOG0665 Jun-N-terminal kinase 100.0 2.8E-44 6E-49 316.4 14.7 281 9-295 14-314 (369)
268 cd05108 PTKc_EGFR Catalytic do 100.0 3.6E-43 7.8E-48 330.8 23.5 251 11-291 6-264 (316)
269 cd05052 PTKc_Abl Catalytic dom 100.0 7.6E-43 1.6E-47 319.8 24.8 249 11-290 5-257 (263)
270 cd05049 PTKc_Trk Catalytic dom 100.0 3.5E-43 7.6E-48 324.8 22.7 251 11-290 4-276 (280)
271 cd05062 PTKc_IGF-1R Catalytic 100.0 6.3E-43 1.4E-47 322.8 23.9 253 10-291 4-274 (277)
272 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1E-42 2.2E-47 317.8 25.0 249 11-291 3-254 (256)
273 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.9E-42 4.1E-47 317.4 26.6 252 12-290 2-260 (267)
274 cd05093 PTKc_TrkB Catalytic do 100.0 7.8E-43 1.7E-47 324.2 24.3 250 11-290 4-274 (288)
275 cd06657 STKc_PAK4 Catalytic do 100.0 6.2E-43 1.4E-47 325.5 23.6 258 12-299 20-278 (292)
276 cd08226 PK_STRAD_beta Pseudoki 100.0 2.8E-43 6.1E-48 333.2 21.6 278 17-298 3-315 (328)
277 cd05059 PTKc_Tec_like Catalyti 100.0 9.1E-43 2E-47 318.1 24.2 248 12-291 4-254 (256)
278 PRK13184 pknD serine/threonine 100.0 7.2E-43 1.6E-47 357.0 26.0 253 12-290 2-284 (932)
279 cd05581 STKc_PDK1 Catalytic do 100.0 3.5E-43 7.6E-48 324.4 21.4 253 12-294 1-280 (280)
280 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.5E-42 5.4E-47 316.6 26.7 254 12-294 2-264 (264)
281 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.7E-43 1.2E-47 320.0 22.2 249 11-290 5-256 (261)
282 KOG0670 U4/U6-associated splic 100.0 1.2E-44 2.6E-49 336.0 11.1 287 4-296 424-751 (752)
283 cd05054 PTKc_VEGFR Catalytic d 100.0 4.2E-43 9.2E-48 333.0 22.1 253 11-291 6-329 (337)
284 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-42 2.4E-47 316.9 23.9 252 13-294 1-256 (256)
285 cd05122 PKc_STE Catalytic doma 100.0 3.2E-42 6.9E-47 312.4 26.7 252 13-293 1-253 (253)
286 cd08216 PK_STRAD Pseudokinase 100.0 7.4E-43 1.6E-47 328.3 23.2 275 24-298 12-302 (314)
287 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-42 2.5E-47 320.0 23.7 250 14-291 1-268 (273)
288 cd05613 STKc_MSK1_N N-terminal 100.0 1.3E-42 2.8E-47 322.9 24.0 264 13-301 1-278 (290)
289 cd06606 STKc_MAPKKK Catalytic 100.0 4.3E-42 9.3E-47 312.8 26.9 255 13-294 1-260 (260)
290 cd05072 PTKc_Lyn Catalytic dom 100.0 1.9E-42 4.1E-47 316.7 24.6 248 11-290 5-256 (261)
291 cd08229 STKc_Nek7 Catalytic do 100.0 1E-42 2.2E-47 319.4 22.7 254 12-290 2-260 (267)
292 cd00192 PTKc Catalytic domain 100.0 1.9E-42 4.1E-47 315.9 24.3 245 18-291 1-260 (262)
293 cd05579 STKc_MAST_like Catalyt 100.0 6.3E-43 1.4E-47 319.8 21.1 251 20-298 1-264 (265)
294 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-42 2.6E-47 324.4 23.3 250 12-291 2-271 (297)
295 cd08222 STKc_Nek11 Catalytic d 100.0 9.4E-43 2E-47 318.5 22.2 253 13-294 1-260 (260)
296 KOG0584 Serine/threonine prote 100.0 3.3E-44 7.1E-49 341.2 12.8 255 11-297 38-302 (632)
297 KOG1151 Tousled-like protein k 100.0 2.3E-44 5E-49 328.6 11.2 265 7-296 458-746 (775)
298 cd05088 PTKc_Tie2 Catalytic do 100.0 1.1E-42 2.5E-47 325.5 22.9 251 11-291 6-276 (303)
299 cd05105 PTKc_PDGFR_alpha Catal 100.0 2E-42 4.4E-47 334.5 25.3 252 11-290 36-392 (400)
300 cd05071 PTKc_Src Catalytic dom 100.0 3.2E-42 7E-47 315.6 25.4 247 11-290 5-255 (262)
301 cd05090 PTKc_Ror1 Catalytic do 100.0 1.9E-42 4E-47 320.7 24.0 251 12-291 5-279 (283)
302 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-42 3.5E-47 355.2 25.8 148 11-159 3-152 (669)
303 KOG1035 eIF-2alpha kinase GCN2 100.0 9.5E-44 2.1E-48 358.3 16.3 258 10-295 477-875 (1351)
304 KOG0193 Serine/threonine prote 100.0 5E-44 1.1E-48 338.1 13.4 254 10-290 390-648 (678)
305 cd05109 PTKc_HER2 Catalytic do 100.0 2.2E-42 4.8E-47 319.6 24.1 251 10-290 5-263 (279)
306 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.3E-42 5E-47 324.0 24.3 252 11-291 17-295 (307)
307 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-42 4.1E-47 319.7 23.4 253 10-291 4-274 (277)
308 cd06618 PKc_MKK7 Catalytic dom 100.0 2.4E-42 5.2E-47 322.2 24.3 259 11-296 14-278 (296)
309 cd05116 PTKc_Syk Catalytic dom 100.0 1.8E-42 3.8E-47 316.4 22.8 242 19-290 2-250 (257)
310 cd05032 PTKc_InsR_like Catalyt 100.0 2.8E-42 6.2E-47 318.2 24.4 251 11-290 5-273 (277)
311 cd05053 PTKc_FGFR Catalytic do 100.0 1.7E-42 3.7E-47 322.5 23.1 252 11-291 11-287 (293)
312 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-42 2.4E-47 322.1 21.7 251 12-291 5-279 (283)
313 cd05068 PTKc_Frk_like Catalyti 100.0 5.4E-42 1.2E-46 313.8 25.8 248 11-290 5-256 (261)
314 cd05075 PTKc_Axl Catalytic dom 100.0 2.2E-42 4.8E-47 318.1 23.3 250 14-291 1-267 (272)
315 cd05066 PTKc_EphR_A Catalytic 100.0 2.8E-42 6E-47 316.8 23.5 251 11-290 3-261 (267)
316 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.6E-42 1.2E-46 313.5 25.3 248 10-290 4-255 (260)
317 cd05051 PTKc_DDR Catalytic dom 100.0 4.9E-42 1.1E-46 319.8 25.0 258 11-290 4-292 (296)
318 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.9E-42 1.5E-46 312.9 25.3 248 10-290 4-255 (260)
319 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.2E-42 1.6E-46 314.1 25.2 251 11-290 4-262 (268)
320 cd05055 PTKc_PDGFR Catalytic d 100.0 7.2E-42 1.6E-46 319.9 25.6 254 9-290 32-296 (302)
321 cd05111 PTK_HER3 Pseudokinase 100.0 7.2E-42 1.6E-46 316.3 24.7 250 11-290 6-263 (279)
322 cd05092 PTKc_TrkA Catalytic do 100.0 5.2E-42 1.1E-46 317.3 23.3 250 11-290 4-276 (280)
323 cd05034 PTKc_Src_like Catalyti 100.0 1.3E-41 2.9E-46 311.0 25.6 249 10-290 4-256 (261)
324 cd05060 PTKc_Syk_like Catalyti 100.0 9.2E-42 2E-46 311.5 24.5 242 18-290 1-250 (257)
325 cd05094 PTKc_TrkC Catalytic do 100.0 7.2E-42 1.6E-46 318.1 23.9 250 11-290 4-277 (291)
326 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-41 2.3E-46 320.5 25.0 251 11-290 11-288 (314)
327 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-41 2.7E-46 318.6 25.1 255 8-291 11-292 (304)
328 PHA02882 putative serine/threo 100.0 1.5E-41 3.2E-46 316.6 25.4 267 1-290 1-291 (294)
329 cd05069 PTKc_Yes Catalytic dom 100.0 2E-41 4.3E-46 309.9 25.7 247 11-290 5-255 (260)
330 cd05112 PTKc_Itk Catalytic dom 100.0 1.8E-41 3.8E-46 309.3 25.3 248 12-291 4-254 (256)
331 cd05065 PTKc_EphR_B Catalytic 100.0 1E-41 2.2E-46 313.4 23.7 250 12-290 4-263 (269)
332 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-41 2.8E-46 310.8 24.1 242 19-290 2-250 (257)
333 cd05045 PTKc_RET Catalytic dom 100.0 8.5E-42 1.9E-46 317.4 23.2 249 13-290 1-281 (290)
334 cd05097 PTKc_DDR_like Catalyti 100.0 1E-41 2.2E-46 317.8 23.7 258 11-290 4-291 (295)
335 cd05041 PTKc_Fes_like Catalyti 100.0 1.2E-41 2.6E-46 309.4 23.6 243 18-290 1-247 (251)
336 cd05039 PTKc_Csk_like Catalyti 100.0 1.8E-41 4E-46 309.3 24.9 244 11-290 5-251 (256)
337 KOG4645 MAPKKK (MAP kinase kin 100.0 3.2E-44 6.9E-49 363.4 7.1 260 10-296 1233-1499(1509)
338 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.3E-42 1.8E-46 325.1 22.9 253 11-291 6-335 (343)
339 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-41 2.7E-46 309.0 22.7 245 20-294 1-250 (250)
340 cd05082 PTKc_Csk Catalytic dom 100.0 3.1E-41 6.8E-46 307.8 25.4 243 11-290 5-251 (256)
341 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.4E-41 5.3E-46 313.2 24.9 264 11-290 2-276 (283)
342 cd05095 PTKc_DDR2 Catalytic do 100.0 2E-41 4.4E-46 315.9 24.2 258 11-290 4-292 (296)
343 PF07714 Pkinase_Tyr: Protein 100.0 4.6E-42 1E-46 314.1 19.6 247 15-290 2-257 (259)
344 cd05583 STKc_MSK_N N-terminal 100.0 1.3E-41 2.8E-46 315.9 22.6 264 13-301 1-276 (288)
345 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.8E-41 6E-46 326.5 25.7 253 11-291 36-395 (401)
346 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.2E-42 7E-47 314.8 17.9 239 18-291 1-256 (258)
347 cd05057 PTKc_EGFR_like Catalyt 100.0 3E-41 6.6E-46 311.9 24.3 250 11-290 6-263 (279)
348 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.8E-41 6.1E-46 320.4 24.6 252 11-291 11-289 (334)
349 cd05050 PTKc_Musk Catalytic do 100.0 2.1E-41 4.6E-46 314.4 23.1 251 11-290 4-284 (288)
350 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-41 4E-46 310.7 22.1 239 18-291 1-260 (262)
351 cd05085 PTKc_Fer Catalytic dom 100.0 4.5E-41 9.8E-46 305.5 24.3 243 18-290 1-246 (250)
352 smart00219 TyrKc Tyrosine kina 100.0 4.4E-41 9.5E-46 306.5 24.2 248 14-290 1-256 (258)
353 cd05040 PTKc_Ack_like Catalyti 100.0 4.6E-41 1E-45 306.7 24.3 244 18-290 1-253 (257)
354 cd05073 PTKc_Hck Catalytic dom 100.0 9.1E-41 2E-45 305.6 25.3 248 10-290 4-255 (260)
355 cd05056 PTKc_FAK Catalytic dom 100.0 5.8E-41 1.3E-45 308.5 24.1 251 11-291 5-261 (270)
356 KOG4721 Serine/threonine prote 100.0 1.2E-42 2.6E-47 325.7 12.9 238 14-291 126-364 (904)
357 cd05047 PTKc_Tie Catalytic dom 100.0 4.8E-41 1E-45 309.2 22.9 243 18-290 1-263 (270)
358 cd05042 PTKc_Aatyk Catalytic d 100.0 6.8E-41 1.5E-45 307.9 23.7 249 18-290 1-265 (269)
359 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.9E-41 8.4E-46 310.6 21.7 238 19-291 2-272 (274)
360 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.2E-40 2.6E-45 308.6 25.1 265 12-290 4-278 (284)
361 cd05043 PTK_Ryk Pseudokinase d 100.0 7.9E-41 1.7E-45 309.2 23.5 251 11-290 5-271 (280)
362 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.7E-41 1.2E-45 311.0 22.4 266 12-291 4-279 (284)
363 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-40 3.4E-45 305.5 24.7 249 18-290 1-265 (269)
364 cd05110 PTKc_HER4 Catalytic do 100.0 7.7E-41 1.7E-45 313.1 23.0 251 11-291 6-264 (303)
365 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-40 2.3E-45 305.2 23.1 244 18-290 1-254 (262)
366 cd05576 STKc_RPK118_like Catal 100.0 4.2E-41 9.2E-46 303.6 19.7 228 23-294 4-237 (237)
367 cd05083 PTKc_Chk Catalytic dom 100.0 1.9E-40 4.1E-45 302.3 23.9 242 11-290 5-249 (254)
368 cd08528 STKc_Nek10 Catalytic d 100.0 1.9E-40 4.2E-45 304.8 24.1 251 13-291 1-266 (269)
369 KOG1187 Serine/threonine prote 100.0 9.7E-41 2.1E-45 315.9 22.1 261 11-290 74-347 (361)
370 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.8E-40 3.8E-45 303.0 22.0 236 18-290 1-256 (259)
371 cd05046 PTK_CCK4 Pseudokinase 100.0 3.2E-40 7E-45 304.3 24.0 252 12-291 5-272 (275)
372 cd05044 PTKc_c-ros Catalytic d 100.0 1.9E-40 4.2E-45 304.7 22.0 244 18-290 1-265 (269)
373 KOG4250 TANK binding protein k 100.0 9.1E-42 2E-46 328.4 12.9 269 12-283 13-296 (732)
374 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.6E-40 5.7E-45 304.5 21.7 250 14-291 1-268 (273)
375 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5E-40 1.1E-44 304.1 22.9 255 11-290 3-278 (284)
376 KOG0194 Protein tyrosine kinas 100.0 7.2E-41 1.6E-45 319.1 17.5 250 12-290 157-415 (474)
377 PLN03225 Serine/threonine-prot 100.0 2.7E-40 6E-45 331.1 22.6 270 10-299 130-458 (566)
378 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-39 2.5E-44 299.6 24.6 249 18-290 1-264 (268)
379 KOG1095 Protein tyrosine kinas 100.0 5.8E-40 1.2E-44 333.7 21.5 251 11-290 691-956 (1025)
380 KOG0587 Traf2- and Nck-interac 100.0 4.3E-40 9.3E-45 322.7 19.6 265 5-298 12-289 (953)
381 KOG1026 Nerve growth factor re 100.0 1.1E-40 2.4E-45 327.9 15.5 250 11-289 485-756 (774)
382 KOG1006 Mitogen-activated prot 100.0 4.1E-42 8.8E-47 295.4 4.6 266 8-297 60-333 (361)
383 PLN03224 probable serine/threo 100.0 6.8E-38 1.5E-42 306.7 24.0 271 11-296 144-505 (507)
384 KOG1167 Serine/threonine prote 100.0 5.8E-39 1.3E-43 292.7 12.3 281 8-296 32-386 (418)
385 smart00220 S_TKc Serine/Threon 100.0 3E-37 6.5E-42 277.8 23.5 243 24-294 1-244 (244)
386 KOG4257 Focal adhesion tyrosin 100.0 3.2E-38 6.9E-43 298.7 15.0 247 13-289 390-643 (974)
387 KOG1094 Discoidin domain recep 100.0 7.2E-38 1.6E-42 294.5 16.4 257 11-290 537-799 (807)
388 KOG0199 ACK and related non-re 100.0 8.2E-38 1.8E-42 299.3 15.8 249 11-289 109-366 (1039)
389 KOG0196 Tyrosine kinase, EPH ( 100.0 3.1E-38 6.6E-43 305.8 12.4 250 13-291 630-887 (996)
390 KOG4278 Protein tyrosine kinas 100.0 2.2E-37 4.8E-42 292.9 16.1 245 12-289 267-517 (1157)
391 KOG0576 Mitogen-activated prot 100.0 2.8E-38 6.1E-43 301.4 6.6 261 11-296 14-276 (829)
392 PLN00113 leucine-rich repeat r 100.0 6.7E-36 1.5E-40 320.9 22.1 253 11-291 689-947 (968)
393 KOG1152 Signal transduction se 100.0 3.9E-37 8.4E-42 289.4 10.9 200 11-213 560-770 (772)
394 KOG1345 Serine/threonine kinas 100.0 1E-37 2.3E-42 269.0 6.4 259 9-295 21-291 (378)
395 KOG1027 Serine/threonine prote 100.0 4.4E-37 9.6E-42 300.2 10.9 247 16-297 513-773 (903)
396 KOG0984 Mitogen-activated prot 100.0 1.4E-36 3.1E-41 252.4 12.0 214 12-227 46-268 (282)
397 KOG0200 Fibroblast/platelet-de 100.0 1.5E-34 3.3E-39 292.3 22.4 250 12-290 296-574 (609)
398 KOG3653 Transforming growth fa 100.0 3.7E-34 7.9E-39 264.2 14.9 193 11-212 209-424 (534)
399 KOG1025 Epidermal growth facto 100.0 2.8E-34 6.1E-39 279.4 14.8 247 14-290 698-952 (1177)
400 cd00180 PKc Catalytic domain o 100.0 1.1E-32 2.5E-37 242.0 22.8 213 20-292 1-215 (215)
401 KOG2052 Activin A type IB rece 100.0 6.4E-33 1.4E-37 254.2 18.9 252 8-290 207-498 (513)
402 PLN00181 protein SPA1-RELATED; 100.0 1E-33 2.2E-38 296.9 10.9 202 65-296 26-270 (793)
403 smart00221 STYKc Protein kinas 100.0 9.3E-32 2E-36 239.6 20.9 204 14-218 1-207 (225)
404 KOG0590 Checkpoint kinase and 100.0 1.8E-31 3.8E-36 266.9 5.5 269 11-299 316-593 (601)
405 smart00750 KIND kinase non-cat 100.0 4.9E-30 1.1E-34 220.5 13.5 166 95-295 1-169 (176)
406 KOG1024 Receptor-like protein 100.0 1.7E-29 3.7E-34 228.2 14.0 251 11-290 283-550 (563)
407 PRK09188 serine/threonine prot 100.0 7.2E-29 1.6E-33 233.6 14.8 168 7-185 13-194 (365)
408 COG0515 SPS1 Serine/threonine 100.0 2.9E-27 6.3E-32 221.5 25.7 262 14-297 2-281 (384)
409 KOG0603 Ribosomal protein S6 k 100.0 6.5E-30 1.4E-34 244.8 7.5 244 19-302 1-254 (612)
410 KOG1164 Casein kinase (serine/ 100.0 4E-27 8.6E-32 221.8 24.6 252 13-290 19-292 (322)
411 KOG1163 Casein kinase (serine/ 100.0 2.1E-27 4.5E-32 202.2 16.1 248 9-284 12-273 (341)
412 KOG1165 Casein kinase (serine/ 99.9 3.1E-27 6.8E-32 209.7 15.9 213 7-224 23-251 (449)
413 KOG0606 Microtubule-associated 99.9 7.8E-27 1.7E-31 234.1 9.9 226 10-300 81-324 (1205)
414 cd05147 RIO1_euk RIO kinase fa 99.9 3.1E-26 6.7E-31 198.6 12.2 143 16-163 1-169 (190)
415 PRK10359 lipopolysaccharide co 99.9 1.1E-25 2.3E-30 197.7 10.6 175 7-206 26-216 (232)
416 PF14531 Kinase-like: Kinase-l 99.9 5.6E-25 1.2E-29 198.8 13.9 235 13-282 13-288 (288)
417 cd05145 RIO1_like RIO kinase f 99.9 8.8E-25 1.9E-29 190.1 14.0 143 16-163 1-169 (190)
418 PRK12274 serine/threonine prot 99.9 2.6E-24 5.6E-29 185.0 14.1 188 15-215 5-210 (218)
419 KOG1240 Protein kinase contain 99.9 6.7E-25 1.5E-29 220.5 7.4 248 13-291 24-291 (1431)
420 KOG4158 BRPK/PTEN-induced prot 99.9 1.4E-23 3E-28 190.7 13.4 194 69-290 274-512 (598)
421 PRK10345 hypothetical protein; 99.9 1.6E-22 3.4E-27 177.1 14.4 135 16-159 6-157 (210)
422 KOG1166 Mitotic checkpoint ser 99.9 1.1E-22 2.5E-27 207.9 13.2 192 11-210 697-901 (974)
423 smart00090 RIO RIO-like kinase 99.9 1.2E-22 2.6E-27 182.1 11.5 146 13-163 29-200 (237)
424 KOG0195 Integrin-linked kinase 99.9 1.8E-22 3.8E-27 175.1 8.0 241 14-289 192-440 (448)
425 KOG0590 Checkpoint kinase and 99.8 1.1E-22 2.5E-27 203.7 -0.2 263 11-296 19-291 (601)
426 KOG1033 eIF-2alpha kinase PEK/ 99.8 9.4E-22 2E-26 185.5 4.3 177 84-294 329-515 (516)
427 cd05144 RIO2_C RIO kinase fami 99.8 3.7E-20 7.9E-25 162.2 12.2 139 14-163 17-177 (198)
428 PRK14879 serine/threonine prot 99.8 8.5E-20 1.8E-24 161.6 12.8 135 18-160 2-143 (211)
429 TIGR03724 arch_bud32 Kae1-asso 99.8 2.5E-19 5.5E-24 157.0 12.0 132 19-161 1-139 (199)
430 cd05119 RIO RIO kinase family, 99.8 3.3E-19 7.2E-24 154.7 12.5 139 16-163 1-166 (187)
431 PRK09605 bifunctional UGMP fam 99.8 7.1E-19 1.5E-23 176.7 14.0 139 11-161 332-477 (535)
432 KOG1023 Natriuretic peptide re 99.8 4.3E-19 9.3E-24 170.5 11.4 205 65-290 1-219 (484)
433 KOG0601 Cyclin-dependent kinas 99.8 4.3E-19 9.3E-24 170.7 8.4 261 7-296 109-384 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.8 8.6E-18 1.9E-22 151.0 14.4 136 17-160 36-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.7 2.3E-17 5.1E-22 137.2 11.3 132 16-160 2-138 (155)
436 KOG0606 Microtubule-associated 99.7 4E-18 8.6E-23 172.1 4.8 267 10-303 802-1104(1205)
437 KOG1243 Protein kinase [Genera 99.6 4.7E-15 1E-19 144.3 15.1 183 14-208 15-199 (690)
438 cd05146 RIO3_euk RIO kinase fa 99.6 9.5E-15 2.1E-19 125.8 13.0 142 17-164 2-177 (197)
439 PRK04750 ubiB putative ubiquin 99.6 8E-16 1.7E-20 151.7 6.2 146 10-163 118-316 (537)
440 TIGR01982 UbiB 2-polyprenylphe 99.6 1.7E-14 3.7E-19 140.6 12.6 142 17-162 122-308 (437)
441 KOG0601 Cyclin-dependent kinas 99.6 2.6E-15 5.7E-20 144.7 5.8 253 10-296 263-519 (524)
442 cd05151 ChoK Choline Kinase (C 99.5 4.6E-14 1E-18 120.2 10.0 128 17-160 3-136 (170)
443 KOG1266 Protein kinase [Signal 99.5 1.1E-14 2.5E-19 130.1 0.5 203 62-296 118-336 (458)
444 KOG3741 Poly(A) ribonuclease s 99.4 7.6E-12 1.7E-16 118.7 17.7 213 24-291 288-521 (655)
445 KOG3087 Serine/threonine prote 99.4 8.7E-12 1.9E-16 103.5 12.6 143 16-160 11-165 (229)
446 cd05154 ACAD10_11_like Acyl-Co 99.3 1.2E-11 2.6E-16 110.0 11.7 140 17-160 3-206 (223)
447 COG3642 Mn2+-dependent serine/ 99.3 1.7E-11 3.6E-16 102.3 11.6 132 18-160 2-140 (204)
448 PF01163 RIO1: RIO1 family; I 99.2 4.2E-11 9.2E-16 102.8 9.9 129 27-163 1-158 (188)
449 KOG2137 Protein kinase [Signal 99.2 7.1E-12 1.5E-16 122.9 4.3 157 120-301 108-275 (700)
450 PRK15123 lipopolysaccharide co 99.2 4.2E-10 9.1E-15 102.4 13.1 133 26-160 36-194 (268)
451 COG0478 RIO-like serine/threon 99.1 3.1E-10 6.8E-15 100.3 9.1 140 14-163 93-254 (304)
452 PF06293 Kdo: Lipopolysacchari 99.1 2.5E-09 5.5E-14 94.0 13.5 105 56-161 56-171 (206)
453 PRK09902 hypothetical protein; 98.9 2.6E-08 5.6E-13 86.2 12.8 137 21-160 27-179 (216)
454 PF06176 WaaY: Lipopolysacchar 98.9 1.1E-08 2.4E-13 88.7 9.1 142 7-160 26-183 (229)
455 COG4248 Uncharacterized protei 98.9 4E-08 8.6E-13 91.7 13.2 251 15-286 14-291 (637)
456 COG1718 RIO1 Serine/threonine 98.8 2.7E-08 5.8E-13 87.3 10.7 149 10-164 43-219 (268)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 1.4E-07 3.1E-12 84.0 12.2 134 18-160 7-182 (226)
458 COG0661 AarF Predicted unusual 98.7 1E-07 2.2E-12 94.0 11.1 141 18-163 131-317 (517)
459 KOG0576 Mitogen-activated prot 98.7 1.7E-09 3.6E-14 105.5 -1.5 247 13-299 243-492 (829)
460 KOG1235 Predicted unusual prot 98.5 1.4E-06 3E-11 85.9 12.1 152 6-164 153-358 (538)
461 PF01636 APH: Phosphotransfera 98.5 1.2E-06 2.7E-11 78.1 11.0 138 17-160 2-197 (239)
462 cd05150 APH Aminoglycoside 3'- 98.5 2.2E-06 4.8E-11 77.4 12.7 71 19-96 5-77 (244)
463 KOG1035 eIF-2alpha kinase GCN2 98.5 1.2E-06 2.7E-11 91.2 11.2 196 60-296 231-439 (1351)
464 COG2112 Predicted Ser/Thr prot 98.4 2.2E-06 4.7E-11 71.5 10.1 129 15-161 25-156 (201)
465 PLN02876 acyl-CoA dehydrogenas 98.4 3E-06 6.5E-11 89.8 13.0 80 16-96 42-129 (822)
466 PF10707 YrbL-PhoP_reg: PhoP r 98.3 1.9E-05 4.1E-10 68.5 13.6 129 17-154 6-165 (199)
467 PF13095 FTA2: Kinetochore Sim 98.2 1.7E-05 3.8E-10 68.2 11.2 128 11-158 36-206 (207)
468 KOG1826 Ras GTPase activating 98.2 1.1E-07 2.4E-12 100.9 -3.3 218 52-297 1270-1498(2724)
469 cd05157 ETNK_euk Ethanolamine 98.1 5E-05 1.1E-09 68.1 12.6 72 17-95 3-76 (235)
470 cd05155 APH_ChoK_like_1 Unchar 98.1 1.3E-05 2.7E-10 72.1 8.4 70 17-95 2-78 (235)
471 TIGR00938 thrB_alt homoserine 98.0 3.6E-05 7.9E-10 72.1 9.9 137 17-159 27-216 (307)
472 cd05153 HomoserineK_II Homoser 98.0 3.4E-05 7.4E-10 71.8 9.3 137 17-160 19-205 (296)
473 PRK09550 mtnK methylthioribose 97.9 0.00024 5.1E-09 68.3 14.5 77 17-95 31-115 (401)
474 TIGR02721 ycfN_thiK thiamine k 97.9 7.9E-05 1.7E-09 67.8 9.7 133 19-160 3-175 (256)
475 KOG2270 Serine/threonine prote 97.9 7E-05 1.5E-09 69.6 9.0 145 16-164 148-317 (520)
476 PF12260 PIP49_C: Protein-kina 97.8 5.9E-05 1.3E-09 65.1 7.3 98 60-161 8-112 (188)
477 PRK05231 homoserine kinase; Pr 97.8 0.00025 5.5E-09 66.7 12.2 31 130-160 187-217 (319)
478 PRK10593 hypothetical protein; 97.8 0.00037 8E-09 64.8 12.5 77 13-95 15-97 (297)
479 cd05156 ChoK_euk Choline Kinas 97.7 0.00033 7.1E-09 65.4 10.8 72 17-95 3-81 (302)
480 KOG2268 Serine/threonine prote 97.6 3E-05 6.5E-10 70.9 2.7 140 14-165 94-256 (465)
481 TIGR01767 MTRK 5-methylthiorib 97.6 0.00099 2.2E-08 62.8 12.5 82 19-102 2-93 (370)
482 KOG1093 Predicted protein kina 97.5 0.00017 3.8E-09 69.7 6.6 172 57-297 28-200 (725)
483 PRK12396 5-methylribose kinase 97.5 0.00086 1.9E-08 64.0 10.3 84 17-102 34-126 (409)
484 PLN02236 choline kinase 97.4 0.0026 5.7E-08 60.5 12.1 140 14-160 38-231 (344)
485 PLN02421 phosphotransferase, a 97.3 0.0025 5.5E-08 60.3 11.4 139 15-160 17-213 (330)
486 TIGR02906 spore_CotS spore coa 97.3 0.003 6.5E-08 59.1 11.7 29 130-159 187-215 (313)
487 cd05152 MPH2' Macrolide 2'-Pho 97.2 0.0022 4.9E-08 58.9 9.0 30 131-160 186-216 (276)
488 COG3173 Predicted aminoglycosi 97.2 0.0043 9.3E-08 57.8 10.7 144 15-161 28-229 (321)
489 TIGR02904 spore_ysxE spore coa 97.1 0.0079 1.7E-07 56.3 12.1 30 131-160 197-226 (309)
490 PLN02756 S-methyl-5-thioribose 97.0 0.014 3.1E-07 56.1 13.3 76 16-95 36-119 (418)
491 COG5072 ALK1 Serine/threonine 96.8 0.0045 9.7E-08 57.9 7.4 74 82-161 297-371 (488)
492 PF03881 Fructosamin_kin: Fruc 96.7 0.027 5.8E-07 52.0 12.0 73 15-94 20-95 (288)
493 PTZ00384 choline kinase; Provi 96.7 0.02 4.4E-07 55.1 11.3 78 15-96 53-134 (383)
494 PF01633 Choline_kinase: Choli 96.5 0.0057 1.2E-07 53.8 6.1 30 131-160 144-174 (211)
495 PRK06148 hypothetical protein; 96.4 0.032 6.9E-07 60.7 12.1 31 130-160 203-236 (1013)
496 PTZ00296 choline kinase; Provi 96.2 0.064 1.4E-06 52.7 12.0 74 16-96 109-191 (442)
497 PF07387 Seadorna_VP7: Seadorn 96.1 0.024 5.1E-07 49.5 7.3 84 58-158 105-190 (308)
498 PRK11768 serine/threonine prot 96.0 0.12 2.6E-06 48.7 12.3 69 24-96 37-112 (325)
499 PF05445 Pox_ser-thr_kin: Poxv 95.2 0.017 3.7E-07 53.7 3.3 74 87-162 247-348 (434)
500 COG3001 Uncharacterized protei 95.1 0.13 2.9E-06 45.2 8.4 70 18-94 22-94 (286)
No 1
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.4e-75 Score=501.75 Aligned_cols=300 Identities=73% Similarity=1.202 Sum_probs=293.2
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|...++||+|.||+||+|++..+|+.||||+++.....+..+..++|||+.|+.++|+||+.++|+|.+.+.+.+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 68999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
|++.||...++.....++..+++.|+.+++.||+|||+++|+||||||+|+||+++|.+||+|||+|+.++++....++.
T Consensus 82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~ 161 (318)
T KOG0659|consen 82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ 161 (318)
T ss_pred eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
+.|+||+|||.++|++.|+..+||||.|||+.||+.|.|+|.|.++.+++..|+..+|++.+..||++..++++.++++.
T Consensus 162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~ 241 (318)
T KOG0659|consen 162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF 241 (318)
T ss_pred eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCccc
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPAT 311 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~ 311 (397)
..++...+++..+.++.||+.+||.+||.+|+|+.|+|+|+||++.+.++.+...+.|..
T Consensus 242 P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~ 301 (318)
T KOG0659|consen 242 PKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST 301 (318)
T ss_pred CCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence 999999999999999999999999999999999999999999999999999888887765
No 2
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.1e-66 Score=456.90 Aligned_cols=304 Identities=43% Similarity=0.807 Sum_probs=277.2
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCeEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLH 87 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~~ 87 (397)
-.+.|++++.|++|+||.||+|+++++++.||+|.++....++..-...+|||.+|.+++|||||.+-++.. +-+.+|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 367899999999999999999999999999999999988888888888899999999999999999988763 345799
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
||||||+.||..++.....+|...+++.++.|++.||+|||.++|+||||||+|+|++..|.+||+|||+|+.++++-..
T Consensus 154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~ 233 (419)
T KOG0663|consen 154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP 233 (419)
T ss_pred eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCccc
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
++..+-|.||+|||.|+|.+.|++++|+||+|||+.||++++|.|.|.++.+++.+|+..+|.+....||+...++..-.
T Consensus 234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~ 313 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKK 313 (419)
T ss_pred CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887643
Q ss_pred ccc--ccCCCccccCCCCC--HHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCccccc
Q 015948 248 YQY--VAAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPRPATKR 313 (397)
Q Consensus 248 ~~~--~~~~~~~~~~~~~s--~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~ 313 (397)
..+ ..-..++..|+.++ +...+|+..+|.+||.+|.||+|+|+|.||...+.+..+...|.-+.+.
T Consensus 314 ~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~k~ 383 (419)
T KOG0663|consen 314 MTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPAKS 383 (419)
T ss_pred cccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCcccc
Confidence 333 33345667777654 9999999999999999999999999999999988887776665444433
No 3
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.1e-67 Score=458.70 Aligned_cols=285 Identities=41% Similarity=0.703 Sum_probs=256.9
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|+.+.++|+|+||+||+|+++.||+.||||++..+........-++|||++|++|+|+|+|.++++|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 67999999999999999999999999999999998777666777788999999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
||+.++++.+......++++.++.|++|++.|++|||++++||||||||||||+.+|.+||||||+|+.+..+...++..
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY 161 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY 161 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence 99999999988877679999999999999999999999999999999999999999999999999999998888899999
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc---
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY--- 248 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--- 248 (397)
+.|+||+|||.+.|..+|+..+||||+||++.||++|.|+|+|.++.+++..|...+|...|+...-...-+-+...
T Consensus 162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP 241 (396)
T KOG0593|consen 162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP 241 (396)
T ss_pred hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence 99999999999999899999999999999999999999999999999999999999998777543211111111111
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
......+++..+|.++.-+.||+.+||..||.+|++.+|+|.|+||.+
T Consensus 242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 112344677888999999999999999999999999999999999954
No 4
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-65 Score=472.12 Aligned_cols=302 Identities=45% Similarity=0.822 Sum_probs=271.4
Q ss_pred cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--
Q 015948 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-- 83 (397)
Q Consensus 6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-- 83 (397)
+...-.+.|+.+++||+|.||.||+|++..+|+.||+|+++.....+..-..+.|||.||++|.||||++|.+...+.
T Consensus 111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~ 190 (560)
T KOG0600|consen 111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS 190 (560)
T ss_pred ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC
Confidence 344457889999999999999999999999999999999999887777777888999999999999999999987665
Q ss_pred CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
+.+|||||||+.||..++......|++.+++.|+.||+.||+|||++||+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 191 ~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 191 GSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred ceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 78999999999999999999888899999999999999999999999999999999999999999999999999998755
Q ss_pred CC-CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 164 PD-RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 164 ~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. ..++..+-|.||+|||+|+|...|+.++|+||.||||.||++|+|+|+|.++.+++..|++..|.+....|+ ...+
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kL 349 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKL 349 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccC
Confidence 44 348889999999999999999999999999999999999999999999999999999999999999999999 5555
Q ss_pred ccccccccc--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCC
Q 015948 243 PDYVEYQYV--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPNKLPR 308 (397)
Q Consensus 243 ~~~~~~~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~ 308 (397)
+....+.-. ....++..+..++..+.+|+..||..||.+|.||.++|+|+||+..+.+..+..++.
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~ 417 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPK 417 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCCC
Confidence 544433322 223456667888999999999999999999999999999999987777776665554
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-65 Score=468.37 Aligned_cols=289 Identities=40% Similarity=0.700 Sum_probs=261.8
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC-e
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG-N 85 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~-~ 85 (397)
..+.++|.+.++||.|.||.||+|+.+.+|..||||.+++.... .....-+||++.|++|+ |||||++.+.+.+.+ .
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 34689999999999999999999999999999999998765433 22223468999999999 999999999998877 9
Q ss_pred EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
+|+|||||+.+|+++++.++..|++..++.|++||++||+|+|.+|+.|||||||||||.....+||+|||+|+.+.+ .
T Consensus 85 L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S-k 163 (538)
T KOG0661|consen 85 LYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS-K 163 (538)
T ss_pred EeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc-C
Confidence 999999999999999999999999999999999999999999999999999999999999888899999999998754 3
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
..++..+.|+||+|||+|+....|+.++||||+|||++|+.+-+|+|.|.++.+++.+|...+|++....|+....+...
T Consensus 164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 46788999999999999999889999999999999999999999999999999999999999999999999886666665
Q ss_pred cccccccC--CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 246 VEYQYVAA--PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 246 ~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
..+++... .++..+.+.++.++.+||.+||.+||.+||||+|+|+||||+...
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 66655444 457788899999999999999999999999999999999998643
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-63 Score=451.58 Aligned_cols=270 Identities=30% Similarity=0.472 Sum_probs=230.6
Q ss_pred cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-----ccchHHHHHHHHHhcCCCCeeEEEeee
Q 015948 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-----VNFTALREIKLLKELKSPHIIELIDAF 80 (397)
Q Consensus 6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~l~~~~ 80 (397)
..+.+.+.|.+.+.||+|+||.|-+|.++++|+.||||++.+.+.... ......+|+++|++|+|||||+++++|
T Consensus 166 ~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f 245 (475)
T KOG0615|consen 166 PPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF 245 (475)
T ss_pred ccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence 455689999999999999999999999999999999999988764331 222346899999999999999999999
Q ss_pred ecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeec
Q 015948 81 PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFG 156 (397)
Q Consensus 81 ~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG 156 (397)
+..+..||||||++ |+|++.+... +.+.+...+.+++||+.|+.|||++||+||||||+|||+..+ -.+||+|||
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999 5888888764 458999999999999999999999999999999999999876 679999999
Q ss_pred cceeeCCCCCcccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCC
Q 015948 157 LARIFGSPDRRFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID-QLGKIFAAFGTATP 233 (397)
Q Consensus 157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 233 (397)
+|+..+ ....+.+.|||+.|.|||++.+. ..|..++|||||||+||-+++|.+||.+..... ..++|.++--...|
T Consensus 325 lAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p 403 (475)
T KOG0615|consen 325 LAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP 403 (475)
T ss_pred hhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC
Confidence 999887 45677889999999999999652 335568999999999999999999999876554 66666554222222
Q ss_pred CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 301 (397)
. .+..+|+++++||.+||..||++|||++|+|+||||...+...
T Consensus 404 ~------------------------~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~s 447 (475)
T KOG0615|consen 404 L------------------------QWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCLS 447 (475)
T ss_pred h------------------------hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccccc
Confidence 2 2346799999999999999999999999999999999765433
No 7
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-61 Score=435.15 Aligned_cols=289 Identities=50% Similarity=0.838 Sum_probs=265.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCC-----
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKG----- 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~----- 84 (397)
...|..+++||+|+||+||+|+++.+|+.||+|+++.....+..-....+|+.+|+.|+|+| ||.+++.+....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 56688899999999999999999999999999999988776777778899999999999999 999999997766
Q ss_pred -eEEEEEEccccCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 85 -NLHLVFEFMETDLETVIRNTN---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 85 -~~~lv~e~~~g~L~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
.+++||||+.-+|..++.... ..++...++.+++||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 899999999999999998876 3588899999999999999999999999999999999999999999999999998
Q ss_pred eCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948 161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 161 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
+.-+...+++.++|.||+|||++.+...|+..+||||+|||++||+++++.|.+.++.+++..|+..+|++....||...
T Consensus 170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence 88788889999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred CCccccc-ccccc-CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 241 YLPDYVE-YQYVA-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 241 ~~~~~~~-~~~~~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
.++++-. +.... ...+....+..++++.+++.+||+++|.+|.|++.+|+||||.....
T Consensus 250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 8888763 22222 44566777788899999999999999999999999999999987543
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-62 Score=439.05 Aligned_cols=271 Identities=28% Similarity=0.446 Sum_probs=238.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
.++|+++++||+|+||+||.++.+.+++.||+|++++....+. .......|..||.+++||+||+++..|++.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 7899999999999999999999999999999999988765443 344577899999999999999999999999999999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
+||+.| +|...+.+ .+.+++..++.|+.+|+.||.|||++|||||||||+||||+.+|+++|+|||+++.........
T Consensus 104 ld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t 182 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDAT 182 (357)
T ss_pred EeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCcc
Confidence 999996 66666665 4459999999999999999999999999999999999999999999999999999766666666
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
.+.|||+.|||||++.+ ..|+..+|+||||+++|||++|.+||.+.+....+.+|.+.-.
T Consensus 183 ~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~------------------- 242 (357)
T KOG0598|consen 183 RTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL------------------- 242 (357)
T ss_pred ccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-------------------
Confidence 77899999999999988 5799999999999999999999999999999998888876521
Q ss_pred ccccCCCccccCCC-CCHHHHHHHHHhcCcCCCCCC----CHHHHhcCCCCCCCCCCCCCCCCCCccc
Q 015948 249 QYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARI----TAQQALEHRYFSSAPLPTEPNKLPRPAT 311 (397)
Q Consensus 249 ~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~R~----t~~e~l~hp~~~~~~~~~~~~~~~~~~~ 311 (397)
...+. +|.++++||.++|+.||++|. .++++.+||||.+..|.........|+.
T Consensus 243 ---------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF 301 (357)
T KOG0598|consen 243 ---------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPF 301 (357)
T ss_pred ---------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCe
Confidence 11222 589999999999999999996 6889999999999988765444443433
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-61 Score=453.68 Aligned_cols=260 Identities=28% Similarity=0.462 Sum_probs=234.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+|...++||+|||++||.+++..+|+.||+|++.+.. .+........+||+|.++|+|||||+++++|++..++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999998754 45556677889999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|+|. |+|..+++ +.+.++|.+|+.|++||+.||.|||+++|+|||||..|+||+++.+|||+|||+|+.+..+..+-.
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 9999 56666665 667799999999999999999999999999999999999999999999999999999988777788
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
+.||||.|.|||++.+ ...+..+||||+|||||.||.|+|||...+-.+.+.+|...-
T Consensus 177 TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~--------------------- 234 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE--------------------- 234 (592)
T ss_pred eecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC---------------------
Confidence 8999999999999986 779999999999999999999999999998899998886641
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 301 (397)
...+..+|.++++||.+||+.||.+|||++++|.|+||+..-.|.
T Consensus 235 -------Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~ 279 (592)
T KOG0575|consen 235 -------YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPA 279 (592)
T ss_pred -------cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCC
Confidence 112235699999999999999999999999999999996654443
No 10
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-61 Score=432.31 Aligned_cols=292 Identities=39% Similarity=0.676 Sum_probs=253.5
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-----C
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-----K 83 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----~ 83 (397)
.+..+|...+.||.|+||.|+.|.++.+|+.||||++.......-...+..||+++|+.++|+||+.+.+.+.. -
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 35677888899999999999999999999999999998655555556678899999999999999999999855 3
Q ss_pred CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
..+|+|+|+|+.||.+.++... .+++..++.+++||+.||+|+|+.||+||||||.|+|++.+..+||||||+|+....
T Consensus 99 ~DvYiV~elMetDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 99 NDVYLVFELMETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred ceeEEehhHHhhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence 4799999999999999988754 399999999999999999999999999999999999999999999999999998753
Q ss_pred --CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC-
Q 015948 164 --PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA- 240 (397)
Q Consensus 164 --~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 240 (397)
.....+..+.|+||+|||++.....|+.++||||+||||.||++|++.|.|.+..+++..|+..+|++.+..+....
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 34456888999999999999988999999999999999999999999999999999999999999988665443222
Q ss_pred --CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948 241 --YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 241 --~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 301 (397)
..+...........++..+++++++.+.||+.+||.+||.+|+|++|+|+|||+...-.+.
T Consensus 258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~ 320 (359)
T KOG0660|consen 258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE 320 (359)
T ss_pred HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence 1111112233455678889999999999999999999999999999999999998654443
No 11
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-59 Score=436.30 Aligned_cols=264 Identities=30% Similarity=0.472 Sum_probs=234.2
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCe
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGN 85 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~ 85 (397)
++-..+|.+.+.||.|+|++|++|+++.+++.||||++.+... ++....-+.+|-.+|.+| .||.|++|+..|+++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 4557789999999999999999999999999999999977643 233333456799999999 89999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
+|+|+||++ |+|+.+|.+.+ .|++..++.|+.||+.||+|||++||||||||||||||+.+|++||+|||.|+.+...
T Consensus 149 LYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 999999998 89999999864 5999999999999999999999999999999999999999999999999999887432
Q ss_pred C-------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 165 D-------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 165 ~-------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
. ......+||..|.+||+|.. ...+.++|||+||||||+|+.|.|||.+.++...+.+|++.--
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y-- 304 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY-- 304 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc--
Confidence 1 11256899999999999976 6789999999999999999999999999999999999988621
Q ss_pred CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 301 (397)
.+.+..++.++|||.++|..||.+|+|++||.+||||.++.|..
T Consensus 305 --------------------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 305 --------------------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN 348 (604)
T ss_pred --------------------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence 23345689999999999999999999999999999999988764
No 12
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-58 Score=376.22 Aligned_cols=286 Identities=48% Similarity=0.833 Sum_probs=271.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.+|...++||+|.||+||+|++..+++.||+|.++.....+..-..+++|+-+|+.++|.|||++++....+..+-+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 45788899999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
||..+|..++...++.++.+.++.++.|++.||.|||++++.||||||.|+||+.+|++||+|||+|+.++-+-+.+...
T Consensus 82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae 161 (292)
T KOG0662|consen 82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161 (292)
T ss_pred HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888889
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
+.|.||++|.+++|.+-|+.+.|+||.|||+.|+.. |+|.|.+++..+++.+|+..+|.+....||.+..++++..+-.
T Consensus 162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ 241 (292)
T KOG0662|consen 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI 241 (292)
T ss_pred eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence 999999999999999999999999999999999985 9999999999999999999999999999999999999887765
Q ss_pred ccC-CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 251 VAA-PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 251 ~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
..+ ..+..+.|.++...+||++++|..+|.+|++++++++||||++.
T Consensus 242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 544 45677888899999999999999999999999999999999864
No 13
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-58 Score=415.19 Aligned_cols=257 Identities=28% Similarity=0.462 Sum_probs=219.2
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe-EEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-LHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~-~~lv 89 (397)
..+.+.++.||+|+.|+||+|+|+.|++.||+|++... ..+....++.+|+++++.++|||||.+|++|.+++. ++|+
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence 45788899999999999999999999999999999443 445566678899999999999999999999999994 9999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
||||+| +|...+.. -+.++|.....++.++++||.|||+ ++||||||||+||||+..|+|||||||.+..+.+. .
T Consensus 157 mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~ 233 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKR-VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--I 233 (364)
T ss_pred hhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--h
Confidence 999995 55555554 4569999999999999999999995 89999999999999999999999999999887554 5
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC-----CcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-----SDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
..+.+||..|||||.+.+ ..|+.++||||||++++||++|+.||... +..+.+..|... .+...|..
T Consensus 234 a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~----ppP~lP~~--- 305 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE----PPPRLPEG--- 305 (364)
T ss_pred cccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC----CCCCCCcc---
Confidence 678899999999999988 67999999999999999999999998875 334444444332 11111110
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
..|+++++||..||++||.+|+++.|+++|||+....
T Consensus 306 -------------------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 306 -------------------EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred -------------------cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 2599999999999999999999999999999997643
No 14
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.8e-57 Score=424.39 Aligned_cols=265 Identities=30% Similarity=0.485 Sum_probs=228.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
.++|++++.||+|+||.||+|+.+.||..||+|++++... ...+....+.|-++|....+|+||+|+.+|++..++|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 6789999999999999999999999999999999998763 334445677899999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC-----
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS----- 163 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~----- 163 (397)
|||++ ||+..++.+.+ .|+++.+++|+.+++.|++.||+.|+|||||||+|+|||..|++||+|||++.-+..
T Consensus 220 MEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred EEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 99999 58888887765 499999999999999999999999999999999999999999999999999853211
Q ss_pred --------------------C-----C-----------------CcccccccCceeeChhcccCccCCCCcchHHHHHHH
Q 015948 164 --------------------P-----D-----------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCI 201 (397)
Q Consensus 164 --------------------~-----~-----------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~i 201 (397)
+ . ......+|||.|+|||++.+ +.|+..+|+||||||
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~I 377 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCI 377 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHH
Confidence 0 0 01235789999999999998 679999999999999
Q ss_pred HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC
Q 015948 202 FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA 281 (397)
Q Consensus 202 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 281 (397)
+||||.|.|||.+++..+...+|+..-.... +| . -..+|++++|||.+||. ||.+
T Consensus 378 myEmLvGyPPF~s~tp~~T~rkI~nwr~~l~---fP------~---------------~~~~s~eA~DLI~rll~-d~~~ 432 (550)
T KOG0605|consen 378 MYEMLVGYPPFCSETPQETYRKIVNWRETLK---FP------E---------------EVDLSDEAKDLITRLLC-DPEN 432 (550)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc---CC------C---------------cCcccHHHHHHHHHHhc-CHHH
Confidence 9999999999999999999999876421111 00 0 11347999999999999 9999
Q ss_pred CCC---HHHHhcCCCCCCCCCCCC
Q 015948 282 RIT---AQQALEHRYFSSAPLPTE 302 (397)
Q Consensus 282 R~t---~~e~l~hp~~~~~~~~~~ 302 (397)
|.. ++||.+||||.++.|...
T Consensus 433 RLG~~G~~EIK~HPfF~~v~W~~l 456 (550)
T KOG0605|consen 433 RLGSKGAEEIKKHPFFKGVDWDHL 456 (550)
T ss_pred hcCcccHHHHhcCCccccCCcchh
Confidence 985 899999999999998754
No 15
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-58 Score=400.21 Aligned_cols=260 Identities=26% Similarity=0.407 Sum_probs=230.7
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
-.++|++++.||.|+||.|.+++++.+|.+||+|++.+... +-.+.+...+|..+|+.+.||+++++++.|.+.+++||
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 46789999999999999999999999999999999987652 22233456689999999999999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
||||++| .|..++++.+ +|++..++.|+.||+.||+|||+++|++|||||||||||.+|.+||+|||+|+.... .
T Consensus 122 vmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---r 197 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---R 197 (355)
T ss_pred EEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC---c
Confidence 9999995 6777777654 599999999999999999999999999999999999999999999999999998743 3
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
..+.||||.|+|||++.. +.|+.++|+|||||++|||+.|.+||.+.+....+++|+++--
T Consensus 198 T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v------------------ 258 (355)
T KOG0616|consen 198 TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV------------------ 258 (355)
T ss_pred EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc------------------
Confidence 678899999999999976 7899999999999999999999999999999999999987622
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPTE 302 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~~ 302 (397)
.+++.+|.++++||.++|+.|-.+|. ...+|..||||.+..|...
T Consensus 259 ----------~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i 308 (355)
T KOG0616|consen 259 ----------KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAI 308 (355)
T ss_pred ----------cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHH
Confidence 12234589999999999999999994 5789999999999887654
No 16
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-57 Score=408.76 Aligned_cols=285 Identities=37% Similarity=0.660 Sum_probs=242.5
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 83 (397)
...=.|.-.+++|.|+||+||.|....+++.||||++-....-. -+|+.+|+.+.|||||+|..+|...
T Consensus 21 ~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 21 KVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK------NRELQIMRKLDHPNIVRLLYFFSSSTESDE 94 (364)
T ss_pred ceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCCch
Confidence 34556889999999999999999999999999999986443211 2799999999999999999888432
Q ss_pred CeEEEEEEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccce
Q 015948 84 GNLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLAR 159 (397)
Q Consensus 84 ~~~~lv~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~ 159 (397)
-++.+||||++-+|...++. .+..++.-.++-|.+||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+
T Consensus 95 ~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 95 VYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred hHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 25678999999999999885 35568999999999999999999999999999999999999976 999999999999
Q ss_pred eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948 160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (397)
Q Consensus 160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 239 (397)
.+...... .+.+.|++|+|||.++|++.|+.++||||.||++.||+-|+|.|.|.+..+++..|++.+|.++.+....+
T Consensus 175 ~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 175 VLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 88655443 66778999999999999999999999999999999999999999999999999999999999887765544
Q ss_pred CCCccccccccccCCCccc-cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 240 AYLPDYVEYQYVAAPPLRS-LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
...-....+......++.. +....++++.+|+.++|.++|.+|.++.|++.||||.....+
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 3322223333344444444 667889999999999999999999999999999999865544
No 17
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-57 Score=408.75 Aligned_cols=262 Identities=32% Similarity=0.520 Sum_probs=227.4
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
...++|.+.+.||+|+||+||+|+++.++..||||.+.+.+......+.+..|+++|+.++|||||.++|+++.++++|+
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 45788999999999999999999999999999999998876555555667899999999999999999999999999999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC------CcEEEeeeccceee
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH------GQLKLADFGLARIF 161 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~------~~~kl~DFG~a~~~ 161 (397)
|||||. |||..++++.+ .+++..++.++.||+.||++||+++||||||||+||||+.. -.+||+|||+|+.+
T Consensus 87 VMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999 68888888765 49999999999999999999999999999999999999875 35899999999988
Q ss_pred CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
. +.....+.||++.|||||++.. .+|+.|+|+||+|+|+|+|++|++||...+..+.+..+.+.-...
T Consensus 166 ~-~~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~---------- 233 (429)
T KOG0595|consen 166 Q-PGSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV---------- 233 (429)
T ss_pred C-chhHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc----------
Confidence 6 4556678899999999999965 679999999999999999999999999999888877554331100
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
..+...++....+|+..+|+.++..|.+..+-+.|++....+
T Consensus 234 ---------------~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 234 ---------------PVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred ---------------CchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 011123467778999999999999999999999999987654
No 18
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-56 Score=429.96 Aligned_cols=310 Identities=23% Similarity=0.358 Sum_probs=253.5
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~ 87 (397)
-.++|++.++||+|+||+|++|..+.+++.||||++++... .....+..+.|..|+...+ ||+++.++.+|++.+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 36889999999999999999999999999999999998763 3334456678888888875 999999999999999999
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
+||||+.|+.+..+. +...|++..++.|+..|+.||+|||++||||||||.+|||+|.+|++||+|||+++..-.....
T Consensus 446 fvmey~~Ggdm~~~~-~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~ 524 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI-HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR 524 (694)
T ss_pred EEEEecCCCcEEEEE-ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCc
Confidence 999999965533333 3345999999999999999999999999999999999999999999999999999987666678
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
.++.|||+.|||||++.+ ..|+.++|||||||+|||||.|.+||.|.++.+....|+.. ..
T Consensus 525 TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-----------~~------- 585 (694)
T KOG0694|consen 525 TSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-----------EV------- 585 (694)
T ss_pred cccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-----------CC-------
Confidence 889999999999999987 67999999999999999999999999999999999888652 11
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCCCCCCCCCCCccc----cccCCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLPRPAT----KRASKAS 318 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~~~~~~~~~~~~----~~~~~~~ 318 (397)
.++..+|.++.+++.++|++||++|+.+ ++|..||||....|....+....|+. +...+.+
T Consensus 586 ----------~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~s 655 (694)
T KOG0694|consen 586 ----------RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVS 655 (694)
T ss_pred ----------CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhc
Confidence 1122459999999999999999999864 78999999999988654443333322 2222344
Q ss_pred CCCC--CCCCcccCCcccccCCCCCCCCCCCCC
Q 015948 319 DFNP--QEGPTVLSPPRKTRRVMPDREGFEGNA 349 (397)
Q Consensus 319 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (397)
++.. ..+.+++.|+........+++.|.+.+
T Consensus 656 nFd~eFt~e~p~Lt~~~~~~l~~~~q~~F~~Fs 688 (694)
T KOG0694|consen 656 NFDEEFTSEKPALTPSDPRPLTEEEQEAFRDFS 688 (694)
T ss_pred ccchhhhcCCCccCCCCccccchhhHHHhcCcc
Confidence 4432 345556666555555555666666554
No 19
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-58 Score=390.64 Aligned_cols=264 Identities=32% Similarity=0.471 Sum_probs=237.4
Q ss_pred cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
....+.+.|.+.+.||+|.|+.||++.+..+|+.||+|++...+......+.+.+|+.|-+.|+|||||+|.+.+.+.++
T Consensus 5 ~~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~ 84 (355)
T KOG0033|consen 5 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF 84 (355)
T ss_pred cccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccce
Confidence 56678999999999999999999999999999999999998777666667778899999999999999999999999999
Q ss_pred EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceee
Q 015948 86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIF 161 (397)
Q Consensus 86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~ 161 (397)
.|+|+|++.| +|...|..+ ..++|..+..+++||++||+|||.+||||||+||+|+|+.+. ..+||+|||+|..+
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred eEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999995 788777765 448999999999999999999999999999999999999654 35999999999998
Q ss_pred CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
+ ........+|||.|||||++.. ..|+..+|||+-|||||-|+.|++||.+.+....+++|++.--...+.+
T Consensus 164 ~-~g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~------ 235 (355)
T KOG0033|consen 164 N-DGEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPE------ 235 (355)
T ss_pred C-CccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcc------
Confidence 7 4556677899999999999976 6799999999999999999999999999999999999988644333333
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
++.+++++++||++||..||++|+|+.|+|+|||+.+
T Consensus 236 ------------------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 236 ------------------WDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred ------------------cCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 4567999999999999999999999999999999975
No 20
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.7e-55 Score=406.27 Aligned_cols=283 Identities=41% Similarity=0.778 Sum_probs=243.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||+||+|++..++..||+|++..... ......+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 3679999999999999999999999999999999875432 223345778999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||++|+|.+.+......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...........
T Consensus 83 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~ 162 (288)
T cd07871 83 EYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN 162 (288)
T ss_pred eCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccC
Confidence 99999999998877667899999999999999999999999999999999999999999999999999876554444556
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....|+.......+..+.+
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (288)
T cd07871 163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLF 242 (288)
T ss_pred ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcccc
Confidence 67889999999987766789999999999999999999999999999999999999999888888876554333322221
Q ss_pred c--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 V--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
. ...+.....+.++.++++||.+||++||.+|||++|+++||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 243 PQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1 1122233446789999999999999999999999999999998
No 21
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.4e-55 Score=417.60 Aligned_cols=288 Identities=33% Similarity=0.579 Sum_probs=235.2
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-C-----CCeeEEEeee
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-S-----PHIIELIDAF 80 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-h-----p~iv~l~~~~ 80 (397)
.+.+..+|.|.++||+|+||.|-+|++.+|++.||||+++... ........|+.+|..|+ | -|+|+++|+|
T Consensus 181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 3446679999999999999999999999999999999997543 33445668999999997 3 4899999999
Q ss_pred ecCCeEEEEEEccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC--cEEEeeecc
Q 015948 81 PHKGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGL 157 (397)
Q Consensus 81 ~~~~~~~lv~e~~~g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~--~~kl~DFG~ 157 (397)
...+|+|||+|.++-+|.++++..+. .|+...++.++.||+.||.+||+.||||+|||||||||...+ .|||+|||.
T Consensus 258 ~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 258 YFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred ccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccc
Confidence 99999999999999999999988643 489999999999999999999999999999999999998654 699999999
Q ss_pred ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
|+.... .....+.+++|+|||+++| ..|+.+.||||||||++||++|.|+|.|.++.+++..|++.+|.+++.-+.
T Consensus 338 Sc~~~q---~vytYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~ 413 (586)
T KOG0667|consen 338 SCFESQ---RVYTYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLD 413 (586)
T ss_pred ccccCC---cceeeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 997643 2337889999999999999 679999999999999999999999999999999999999999976543111
Q ss_pred ---C------C-CCCcccc-c----------------------cccc-cCCCccccCC-CCCHHHHHHHHHhcCcCCCCC
Q 015948 238 ---D------L-AYLPDYV-E----------------------YQYV-AAPPLRSLFP-SASDDALDLLSKMFTYDPKAR 282 (397)
Q Consensus 238 ---~------~-~~~~~~~-~----------------------~~~~-~~~~~~~~~~-~~s~~~~~li~~~L~~dP~~R 282 (397)
. . ...+... + .... ....+....+ .....+.|||.+||.+||.+|
T Consensus 414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R 493 (586)
T KOG0667|consen 414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER 493 (586)
T ss_pred hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence 0 0 0010000 0 0000 1112222222 234567999999999999999
Q ss_pred CCHHHHhcCCCCCCCCCCC
Q 015948 283 ITAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 283 ~t~~e~l~hp~~~~~~~~~ 301 (397)
+|+.|+|+||||+......
T Consensus 494 ~tp~qal~Hpfl~~~~~~~ 512 (586)
T KOG0667|consen 494 ITPAQALNHPFLTGTSLER 512 (586)
T ss_pred CCHHHHhcCcccccccccc
Confidence 9999999999999765543
No 22
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.3e-56 Score=392.41 Aligned_cols=290 Identities=44% Similarity=0.781 Sum_probs=249.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~ 85 (397)
...|++.+.||+|.||.||+|..++++. .||||++...+........+.||+.+++.++||||+.|...|-. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 4679999999999999999997666543 68999998887777888899999999999999999999999866 889
Q ss_pred EEEEEEccccCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC----CcEEEeeecc
Q 015948 86 LHLVFEFMETDLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGL 157 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~----~~~kl~DFG~ 157 (397)
+++++||++.||+..|+-. ...++...++.++.||+.|+.|||+++|+||||||.||||..+ |.|||+|||+
T Consensus 103 v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 103 VWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence 9999999999999998653 2458999999999999999999999999999999999999887 8999999999
Q ss_pred ceeeCCCCCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---------cHHHHHHHH
Q 015948 158 ARIFGSPDRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---------DIDQLGKIF 225 (397)
Q Consensus 158 a~~~~~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---------~~~~~~~i~ 225 (397)
++.+.++-.. ....+-|.||+|||.++|.+.|+.++|||++|||+.||++-.|.|.+.. ..+++.+|+
T Consensus 183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf 262 (438)
T KOG0666|consen 183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF 262 (438)
T ss_pred HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence 9998766443 3456679999999999999999999999999999999999999998743 468899999
Q ss_pred HHhCCCCCCCCCCCCCCccccc-cc-----cccC---CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 226 AAFGTATPSQWPDLAYLPDYVE-YQ-----YVAA---PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
+.+|.+....||++..+|++.. .. +... ..+-.....-++.+.+|+.+||++||.+|+|++|+|+|+||..
T Consensus 263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~ 342 (438)
T KOG0666|consen 263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE 342 (438)
T ss_pred HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence 9999999999999999988721 11 1111 1111222334677999999999999999999999999999998
Q ss_pred CCCC
Q 015948 297 APLP 300 (397)
Q Consensus 297 ~~~~ 300 (397)
.+.|
T Consensus 343 d~lp 346 (438)
T KOG0666|consen 343 DPLP 346 (438)
T ss_pred CCCC
Confidence 7665
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-55 Score=413.84 Aligned_cols=259 Identities=33% Similarity=0.493 Sum_probs=228.6
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~ 84 (397)
...++|.+.+.||+|+||+|++|++..+|..||+|++.+.... ......+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 5678999999999999999999999999999999977664222 133445668999999999 999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceeeC
Q 015948 85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFG 162 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~~ 162 (397)
.+|+|||||. |+|++.+.+ .+++.|..++.+++||+.|++|||++||+||||||+|||++.+ +++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 9999999998 599999998 6679999999999999999999999999999999999999999 999999999999875
Q ss_pred CCCCcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
.......+.+||+.|+|||++.+.. +.+.++||||+||+||.|++|+.||...+....+..|...-
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~------------- 239 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE------------- 239 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC-------------
Confidence 4566788899999999999998855 44699999999999999999999999987777777755431
Q ss_pred CccccccccccCCCccccCCCC-CHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
-.+...+ |.++++||.+||..||.+|+|+.++++||||+.
T Consensus 240 ---------------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 240 ---------------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ---------------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 0122234 899999999999999999999999999999987
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.8e-56 Score=415.49 Aligned_cols=256 Identities=32% Similarity=0.517 Sum_probs=232.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+....+.....+.+|++|++.|+|||||.++++|+...++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 68999999999999999999999999999999999888777667778899999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
||.|+|..++.. ++.++|+.++.++.+++.||.|||+++|+|||+||.|||+..+|.+|+||||+|+..+......+..
T Consensus 82 ~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi 160 (808)
T KOG0597|consen 82 YAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI 160 (808)
T ss_pred hhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence 999988888775 4569999999999999999999999999999999999999999999999999999998877777888
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
-|||.|||||++.+ ..|+..+|+||||||+|||+.|+|||...+-.+....|... +..||
T Consensus 161 kGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d-----~v~~p-------------- 220 (808)
T KOG0597|consen 161 KGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD-----PVKPP-------------- 220 (808)
T ss_pred cCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC-----CCCCc--------------
Confidence 89999999999986 77999999999999999999999999988776666666542 22222
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
+.+|.++++|+..+|.+||.+|+|..+++.|||++..
T Consensus 221 ---------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 221 ---------STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred ---------ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 2568999999999999999999999999999998754
No 25
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-55 Score=415.70 Aligned_cols=267 Identities=28% Similarity=0.450 Sum_probs=237.3
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecC-CccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.....+-|.+.+.||.|+.|.|-+|+|..||+..|||++.+. .........+.+||-||+.+.||||+++||.|+++.+
T Consensus 7 ~~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ 86 (786)
T KOG0588|consen 7 HKNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH 86 (786)
T ss_pred ccccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce
Confidence 345577899999999999999999999999999999999887 4455566678899999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
+|+|+||++ |.|++++..++ ++++.++..+++||+.|+.|||..+|+||||||+|+||+..+++||+|||+|... .+
T Consensus 87 lylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~~ 164 (786)
T KOG0588|consen 87 LYLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE-VP 164 (786)
T ss_pred EEEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc-cC
Confidence 999999998 67888888755 5999999999999999999999999999999999999999999999999999764 45
Q ss_pred CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
+....+.||++.|.|||++.|.++.+.++||||.|||||.||+|+.||++.+-...+.++..+.
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~---------------- 228 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV---------------- 228 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc----------------
Confidence 6778889999999999999998888999999999999999999999999877777777776541
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEP 303 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~ 303 (397)
-..+..+|.++++||.+||..||++|+|.+||++|||+....-....
T Consensus 229 ------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 229 ------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred ------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence 12234679999999999999999999999999999999876544433
No 26
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-56 Score=387.58 Aligned_cols=252 Identities=28% Similarity=0.494 Sum_probs=218.1
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEe-eeecCC-
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-AFPHKG- 84 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~-~~~~~~- 84 (397)
.......|+|.++||+|+||+||++++..+|..+|.|.+...............|+.+|++|+|||||++++ .|.++.
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e 93 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE 93 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence 355567899999999999999999999999999999999877666666777889999999999999999988 554444
Q ss_pred eEEEEEEccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHh--CC--ccccCCCCCcEEEccCCcEEEeeec
Q 015948 85 NLHLVFEFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHK--KW--VLHRDMKPNNLLIGSHGQLKLADFG 156 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~--~~--ivHrDlkp~NILl~~~~~~kl~DFG 156 (397)
-++||||||+ |||.+.++. ....++|..+|.++.|++.||.+||+ .. |+||||||.||+|+.+|.+||+|||
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence 4999999999 788887754 45679999999999999999999999 44 9999999999999999999999999
Q ss_pred cceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 157 LARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
+++.+.+......+.+|||+||+||.+.+ ..|+.++|||||||++|||+.-++||.|.+-...-.+|.++-- ...
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~----~~~ 248 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY----PPL 248 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC----CCC
Confidence 99999888777888999999999999987 6799999999999999999999999999966666666654310 001
Q ss_pred CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH
Q 015948 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285 (397)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~ 285 (397)
|+ ...|.++..+|..|+..||+.||+.
T Consensus 249 p~----------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 249 PD----------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred cH----------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 10 1238999999999999999999985
No 27
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-53 Score=398.79 Aligned_cols=287 Identities=42% Similarity=0.746 Sum_probs=235.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||+||+|++..+++.||||++...... .....+.+|+.+++.++||||+++++++.++...|+||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 47899999999999999999999999999999998754322 22345678999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||+.++|.+.+.+....+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++............
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 162 (303)
T cd07869 83 EYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSN 162 (303)
T ss_pred ECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCC
Confidence 99999999999887677999999999999999999999999999999999999999999999999999876544444556
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..+++.|+|||++.+...++.++|||||||++|+|++|.+||.+..+ .+.+..+...++......|+.....+......
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T cd07869 163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER 242 (303)
T ss_pred CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence 67889999999987766789999999999999999999999988655 45667777777766666665543322211111
Q ss_pred c--ccCCCccccCC--CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 250 Y--VAAPPLRSLFP--SASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 250 ~--~~~~~~~~~~~--~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
+ .....+...+. ..++++++||.+||+.||++|||++|+++||||.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 0 11111111111 2467899999999999999999999999999998753
No 28
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.9e-52 Score=392.66 Aligned_cols=287 Identities=40% Similarity=0.777 Sum_probs=244.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||+||+|++..+++.||+|.+..... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 4789999999999999999999999999999999876543 223345678999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||++++|...+...+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............
T Consensus 84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 163 (309)
T cd07872 84 EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN 163 (309)
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccc
Confidence 99999999998877777899999999999999999999999999999999999999999999999999876554444455
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....|+.......+..+.+
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
T cd07872 164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNF 243 (309)
T ss_pred ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhc
Confidence 67788999999987766789999999999999999999999999998899999999988887777776544332222211
Q ss_pred c--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 251 V--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 251 ~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
. .........+.++.++++||.+||..||.+|||++|+++||||....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 244 PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred CccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 1 11122234466899999999999999999999999999999998643
No 29
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3e-52 Score=387.60 Aligned_cols=280 Identities=41% Similarity=0.751 Sum_probs=234.2
Q ss_pred cceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeee-----c
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFP-----H 82 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~-----~ 82 (397)
++|++.+.||+|+||+||+|++.. ++..||+|.+............+.+|+.+++.+ .||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999865 468899999876655444444566788887776 6999999999874 3
Q ss_pred CCeEEEEEEccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 83 KGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 83 ~~~~~lv~e~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
...+++||||++++|..++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 4579999999999999988764 345899999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
... .......+++.|+|||++.+ ..++.++|||||||++|||++|.+||.+.++.+.+..++...+...+..|+....
T Consensus 161 ~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 161 SFQ-MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred cCC-cccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence 433 33445668899999999976 5689999999999999999999999999999999999999888877777765443
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
++... +......++..+.+.++..+++||.+||+.||++|||+.|+|+||||
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 239 LPRQA-FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ccchh-ccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 33221 12223334455667789999999999999999999999999999998
No 30
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2e-52 Score=388.17 Aligned_cols=282 Identities=37% Similarity=0.658 Sum_probs=227.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||+|+||+||+|+++.+++.||+|++............+.+|+.+++.++||||++++++|..++.+|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47999999999999999999999999999999998765544555567889999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Ccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTH 170 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~~~ 170 (397)
|++++++..+......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE 160 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence 99998888877666679999999999999999999999999999999999999999999999999998764332 22334
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..+++.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+.+..+....+......+......+.......
T Consensus 161 ~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07848 161 YVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF 239 (287)
T ss_pred cccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence 568889999999976 4589999999999999999999999999888777777666554433221110000000000000
Q ss_pred c----cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 V----AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~----~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
. ...........+|.++.+||.+||+.||++|||++|+|+||||
T Consensus 240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0 0000112234578999999999999999999999999999998
No 31
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-54 Score=371.93 Aligned_cols=267 Identities=29% Similarity=0.490 Sum_probs=235.2
Q ss_pred ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc------cchHHHHHHHHHhc-CCCCeeEEE
Q 015948 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV------NFTALREIKLLKEL-KSPHIIELI 77 (397)
Q Consensus 5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~------~~~~~~E~~~l~~l-~hp~iv~l~ 77 (397)
+..+.+.+.|.-.+.||.|..++|-++.++.+|+.+|+|++......... .+.-.+|+.||+++ .||+|+++.
T Consensus 10 ~aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~ 89 (411)
T KOG0599|consen 10 DAAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQ 89 (411)
T ss_pred hhHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEee
Confidence 45677889999999999999999999999999999999999765432211 12234799999998 699999999
Q ss_pred eeeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948 78 DAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG 156 (397)
Q Consensus 78 ~~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG 156 (397)
|.|+.+.++++|+|.|+ |.|.+++.+.- .+++...+.+++||++|+.|||.++||||||||+|||++++.++||+|||
T Consensus 90 D~yes~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 90 DVYESDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred eeccCcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999 88999887654 49999999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCCcccccccCceeeChhccc-----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 157 LARIFGSPDRRFTHQVFARWYRAPELLF-----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~-----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
+|+.+.. .......||||.|+|||.+. +...|+..+|+|++|||+|.|+.|.|||......-.+..|+++--..
T Consensus 169 Fa~~l~~-GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF 247 (411)
T KOG0599|consen 169 FACQLEP-GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQF 247 (411)
T ss_pred eeeccCC-chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccccc
Confidence 9998854 55778899999999999984 34579999999999999999999999999888888888888876666
Q ss_pred CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
....|.| +|.+++|||.+||+.||.+|+|++|+|.||||...
T Consensus 248 ~speWad------------------------is~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 248 RSPEWAD------------------------ISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred CCcchhh------------------------ccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence 6666654 48999999999999999999999999999999543
No 32
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6e-53 Score=382.66 Aligned_cols=264 Identities=25% Similarity=0.345 Sum_probs=227.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
.++|++++.||.|.-|+||+|+...++..+|+|++.+.... .....++..|-+||+.+.||+++.||..|+.+.+.|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 57899999999999999999999999999999999876543 33344566799999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC----
Q 015948 90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS---- 163 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~---- 163 (397)
||||. |+|..+.+++ +..|++..++.|+.+++.||+|||-.|||+||||||||||.++|+|-|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 99999 5777777766 45699999999999999999999999999999999999999999999999998742100
Q ss_pred -------------------------------C---------------------CCcccccccCceeeChhcccCccCCCC
Q 015948 164 -------------------------------P---------------------DRRFTHQVFARWYRAPELLFGAKQYGA 191 (397)
Q Consensus 164 -------------------------------~---------------------~~~~~~~~~t~~y~aPE~l~~~~~~~~ 191 (397)
. .......+||..|+|||++.| ...+.
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgs 314 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGS 314 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-CCCCc
Confidence 0 012235678889999999988 56899
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHH
Q 015948 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLL 271 (397)
Q Consensus 192 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 271 (397)
++|||+||+++|||+.|..||.|.++.+.+..|+..-. .. ...+.+|..++|||
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l-----~F---------------------p~~~~vs~~akDLI 368 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL-----KF---------------------PEEPEVSSAAKDLI 368 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC-----cC---------------------CCCCcchhHHHHHH
Confidence 99999999999999999999999999999888865311 11 11125689999999
Q ss_pred HHhcCcCCCCCCC----HHHHhcCCCCCCCCCCC
Q 015948 272 SKMFTYDPKARIT----AQQALEHRYFSSAPLPT 301 (397)
Q Consensus 272 ~~~L~~dP~~R~t----~~e~l~hp~~~~~~~~~ 301 (397)
+++|.+||.+|+. |+||.+||||.++.|.-
T Consensus 369 r~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaL 402 (459)
T KOG0610|consen 369 RKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWAL 402 (459)
T ss_pred HHHhccChhhhhccccchHHhhcCccccCCChhh
Confidence 9999999999998 99999999999999874
No 33
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-53 Score=386.50 Aligned_cols=260 Identities=29% Similarity=0.497 Sum_probs=213.2
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC--eEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--NLHL 88 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~l 88 (397)
.-+|...+.||+|+||+||++.+.++|..+|||.+....... ...+.+|+.+|++|+|||||++++...... .+++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 456889999999999999999999999999999987662211 345778999999999999999999754444 6999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCC---
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGS--- 163 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~--- 163 (397)
+|||+. |+|.+++.+.++.+++..++.|.+||++||.|||++||+||||||+||||+. +|.+||+|||++.....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 999998 6888888876657999999999999999999999999999999999999999 79999999999987753
Q ss_pred CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
.........||+.|||||++......+.++|||||||++.||+||.+||... .+....++......
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~------------ 239 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED------------ 239 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC------------
Confidence 1233446789999999999985233345999999999999999999999874 22222222211111
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
....++..+|.++++||.+||..||++||||+++|+|||..+.
T Consensus 240 -----------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 240 -----------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred -----------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 1113445679999999999999999999999999999998764
No 34
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-53 Score=391.03 Aligned_cols=264 Identities=28% Similarity=0.429 Sum_probs=222.1
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------------ccchHHHHHHHHHhcCCCCee
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------------VNFTALREIKLLKELKSPHII 74 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------------~~~~~~~E~~~l~~l~hp~iv 74 (397)
..+..++|++.+.||+|.||.|.+|++..+++.||||++.+...... ..+...+||.||++|.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 45678999999999999999999999999999999999976542211 124567899999999999999
Q ss_pred EEEeeeec--CCeEEEEEEccccCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948 75 ELIDAFPH--KGNLHLVFEFMETDLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (397)
Q Consensus 75 ~l~~~~~~--~~~~~lv~e~~~g~L~~~~~~~~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k 151 (397)
+|+++..+ .+.+|||+|||..+-..+.-. +.. +++.+++.|++.++.||+|||.+|||||||||+|+||+++|++|
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 99999855 568999999998443333322 333 89999999999999999999999999999999999999999999
Q ss_pred EeeeccceeeC-----CCCCcccccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015948 152 LADFGLARIFG-----SPDRRFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK 223 (397)
Q Consensus 152 l~DFG~a~~~~-----~~~~~~~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 223 (397)
|+|||.+..+. ..+......+|||.|+|||.+.+. ...+.+.|||||||+||.|+.|+.||.++...+...+
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K 330 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK 330 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH
Confidence 99999998762 223345568999999999999772 3457889999999999999999999999999999998
Q ss_pred HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
|.+.--. -...+.+.++++|||.+||.+||.+|++..+|..|||....
T Consensus 331 Ivn~pL~--------------------------fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 331 IVNDPLE--------------------------FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HhcCccc--------------------------CCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 8764111 11223457899999999999999999999999999998754
No 35
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-53 Score=399.75 Aligned_cols=258 Identities=29% Similarity=0.499 Sum_probs=228.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
...|...++||+|+.|.||.|+...+++.||||.+.+..+.. .+.+++|+.+|+..+|+|||++++.|-.++.+|+||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 567999999999999999999999999999999998776543 346789999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++| +|.+.+... .++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+........
T Consensus 350 Eym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred eecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 99996 555554433 399999999999999999999999999999999999999999999999999999887777888
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
+.+||++|||||++.. +.|+.++||||||+++.||+-|.|||-..+....+..|... |.+..
T Consensus 428 TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~l---------------- 489 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKL---------------- 489 (550)
T ss_pred cccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCc----------------
Confidence 9999999999999976 78999999999999999999999999988888877777553 22211
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
.....+|+.+++||.+||+.|+.+|+++.|+|+||||....
T Consensus 490 --------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 490 --------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred --------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 22346799999999999999999999999999999996543
No 36
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-52 Score=391.59 Aligned_cols=263 Identities=34% Similarity=0.543 Sum_probs=234.2
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~ 84 (397)
...+.+.|.+.+.||+|.||.||+|+++.+|+.||+|++.+...... ....+.+|+.+|++++ |||||.++++|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 45678899999999999999999999999999999999988765432 3456789999999998 999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC----CcEEEeeeccce
Q 015948 85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLAR 159 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~----~~~kl~DFG~a~ 159 (397)
.+|+|||+|. |.|.+.+.+. .+++..+..+++||+.|++|||+.||+||||||+|+|+... +.+|++|||++.
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 9999999999 5888888877 39999999999999999999999999999999999999754 479999999999
Q ss_pred eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948 160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (397)
Q Consensus 160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 239 (397)
.... .......+||+.|+|||++.. ..|+..+||||+||++|.|++|.+||.+.+.......|..+--...
T Consensus 188 ~~~~-~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~------- 258 (382)
T KOG0032|consen 188 FIKP-GERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFT------- 258 (382)
T ss_pred EccC-CceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCC-------
Confidence 8876 667888999999999999975 6799999999999999999999999999998888877766532222
Q ss_pred CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
...|+.+|..+++||.+||..||.+|+|+.++|+|||+.+.
T Consensus 259 -----------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 259 -----------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred -----------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 23445679999999999999999999999999999999875
No 37
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-53 Score=360.11 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=229.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
..++|.+.+.||+|.||.||+|+.++++..||+|++.+... .......+.+|++|...|+||||+++|++|.++..+|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 47889999999999999999999999999999999988763 34455567899999999999999999999999999999
Q ss_pred EEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 89 VFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
++||.. |.++..+..+ ...+++..+..|++|++.||.|||.++++||||||+|+|++..|.+||+|||.+.... ..
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--~~ 177 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SN 177 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC--CC
Confidence 999998 7888888854 4559999999999999999999999999999999999999999999999999997653 55
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
...+.|||..|.+||+..+ ..++..+|+|++|++.||++.|.+||...+..+.+.+|.+.--
T Consensus 178 kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~----------------- 239 (281)
T KOG0580|consen 178 KRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL----------------- 239 (281)
T ss_pred CceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc-----------------
Confidence 6778999999999999977 6789999999999999999999999999998888888876411
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.+...+|.+++|||.+||.++|.+|.+..|++.|||...
T Consensus 240 -----------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 240 -----------KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred -----------cCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 122467999999999999999999999999999999753
No 38
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-51 Score=404.41 Aligned_cols=280 Identities=34% Similarity=0.609 Sum_probs=225.1
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------- 82 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 82 (397)
..++|.+.+.||+|+||+||+|.+..+++.||||++.... ....+|+.+|+.++||||++++++|..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 3568999999999999999999999999999999885432 123479999999999999999887633
Q ss_pred -CCeEEEEEEccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeecc
Q 015948 83 -KGNLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGL 157 (397)
Q Consensus 83 -~~~~~lv~e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~ 157 (397)
..++++||||+++++...+.. .+..+++..++.++.||+.||+|||++||+||||||+||||+.++ .+||+|||+
T Consensus 138 ~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred CceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 235789999999988777653 345699999999999999999999999999999999999998665 699999999
Q ss_pred ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
|+.+.... .....++|+.|+|||++.+...|+.++|||||||++|||++|.+||.+.+..+.+.++...++.+....+.
T Consensus 218 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~ 296 (440)
T PTZ00036 218 AKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK 296 (440)
T ss_pred chhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 98764332 23346789999999998876679999999999999999999999999999999999998887765443322
Q ss_pred CCCCCccccc--cccccCCCccccC-CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 238 DLAYLPDYVE--YQYVAAPPLRSLF-PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 238 ~~~~~~~~~~--~~~~~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
... +.+.. +.......+...+ ...++++++||.+||++||.+|+|+.|+|+||||....
T Consensus 297 ~~~--~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 297 EMN--PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred Hhc--hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 111 01111 1111112222222 35789999999999999999999999999999997653
No 39
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2e-51 Score=390.35 Aligned_cols=286 Identities=38% Similarity=0.640 Sum_probs=227.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----CeEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----GNLH 87 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~~~~ 87 (397)
+|++.+.||+|+||.||+|++..+|..||||++............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 69999999999999999999999999999999875433333334577899999999999999999987432 3589
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-- 165 (397)
+|||||+++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 999999999998887644 58999999999999999999999999999999999999999999999999998643221
Q ss_pred -CcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 166 -RRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 166 -~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
......++++.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+...++.+.+..+.......
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 122456789999999998642 468899999999999999999999999988887777777766654433221111000
Q ss_pred --cc-cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 244 --DY-VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 244 --~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
.. .........++...++.+++++.+||.+||+.||++|||++|+++||||.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 00 000111122233445677899999999999999999999999999999986443
No 40
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.2e-51 Score=380.21 Aligned_cols=292 Identities=67% Similarity=1.151 Sum_probs=254.0
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
+|.+.+.||+|+||.||+|.+..+|+.||||.+...... ......+.+|+.+++.++|+||+++++++.++...|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 589999999999999999999999999999999866543 23344567899999999999999999999999999999
Q ss_pred EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|||+.|+|..++......+++..+..++.||+.||.|||++||+|+||||+||+++.+|.++|+|||+++..........
T Consensus 81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (298)
T cd07841 81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT 160 (298)
T ss_pred EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc
Confidence 99998889988876654699999999999999999999999999999999999999999999999999988766554455
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||.+.+...++.++|+|||||++|+|++|.++|.+.++.+.+.++...++......|+.......+....
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T cd07841 161 HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFK 240 (298)
T ss_pred ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccc
Confidence 55678889999998765678899999999999999999999999999988899998888877777777766666665555
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~ 304 (397)
.....+....+...+..+.+||.+||..||++|||+.|++.|+||.+...++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~~~ 295 (298)
T cd07841 241 PFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTPPS 295 (298)
T ss_pred ccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCCCC
Confidence 5555556667778899999999999999999999999999999999887766443
No 41
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6.3e-51 Score=380.92 Aligned_cols=287 Identities=39% Similarity=0.749 Sum_probs=241.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||.|+||.||+|++..++..||+|.+...... .....+.+|+.+++.++|+||+++++++..++.+|+||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 57899999999999999999999999999999998755432 22335678999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||++++|...+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++............
T Consensus 84 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (301)
T cd07873 84 EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSN 163 (301)
T ss_pred eccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccc
Confidence 99999999998877667999999999999999999999999999999999999999999999999999876544444445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++......|+.......+..+..
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
T cd07873 164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY 243 (301)
T ss_pred cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccccc
Confidence 56788899999987766688999999999999999999999999888888888888888777777765432221111111
Q ss_pred --ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 251 --VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 251 --~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
..........+.+++++++||.+||+.||.+|||++|+++||||....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 111112234456789999999999999999999999999999997643
No 42
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.4e-51 Score=380.33 Aligned_cols=282 Identities=47% Similarity=0.825 Sum_probs=237.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||+|+||.||+|++..+|+.||+|.+............+.+|+.+++.++|+||+++++++.+.+.+|+|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 58999999999999999999999999999999976554444455677899999999999999999999999999999999
Q ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948 93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (397)
Q Consensus 93 ~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 172 (397)
++++|...+......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..............
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (284)
T cd07839 81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEV 160 (284)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCc
Confidence 99999998887667799999999999999999999999999999999999999999999999999987655544455566
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC-CCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
++..|+|||++.+...++.++|||||||++|+|++|.. +|.+.+..+.+..++..++......|+.....++...+...
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07839 161 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMY 240 (284)
T ss_pred cccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCC
Confidence 78889999998776668999999999999999998765 46777777888888888777666656544443333222111
Q ss_pred c-CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 252 A-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 252 ~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
. ...+....+.+++++++||.+||..||.+|||++++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 1 111234456789999999999999999999999999999998
No 43
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.5e-51 Score=377.38 Aligned_cols=279 Identities=40% Similarity=0.758 Sum_probs=231.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeeec-----CC
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFPH-----KG 84 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~~-----~~ 84 (397)
+|++.+.||+|+||+||+|+++.+|+.||+|.+..............+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 59999999999999999999999999999999876544444444566788877766 69999999998754 34
Q ss_pred eEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 85 NLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 85 ~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
.+++||||+.++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 689999999999988887643 3489999999999999999999999999999999999999999999999999987643
Q ss_pred CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
. .......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+.++...++......|+.....+
T Consensus 161 ~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 161 Q-MALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred c-ccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 2 22334567888999999976 568999999999999999999999999999889999998888877766666433222
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.. .+............+.++.++.+||.+||+.||++|||+.|++.||||
T Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 239 RG-AFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cc-ccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 11 111122233445566789999999999999999999999999999998
No 44
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-51 Score=375.65 Aligned_cols=269 Identities=28% Similarity=0.383 Sum_probs=224.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+.|++.++||.|..++||+|+.+.++..||||++...+.... ...+.+|+..|+.++||||++++..|..+..+|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 6789999999999999999999999999999999998876655 456789999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (397)
Q Consensus 91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~- 167 (397)
.||. |++++.++.. ...++|..+..+++++++||.|||++|.||||||+.||||+.+|.|||+|||.+..+.+...+
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~ 183 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ 183 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence 9998 6888887764 334999999999999999999999999999999999999999999999999987665433322
Q ss_pred ---ccccccCceeeChhcc-cCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 168 ---FTHQVFARWYRAPELL-FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 168 ---~~~~~~t~~y~aPE~l-~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
+.+.+||++|||||++ .....|+.++||||||++..||.+|+.||........+-.-++ ..+|... ...++
T Consensus 184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq---n~pp~~~--t~~~~ 258 (516)
T KOG0582|consen 184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ---NDPPTLL--TSGLD 258 (516)
T ss_pred eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc---CCCCCcc--cccCC
Confidence 2566899999999994 4456799999999999999999999999998877665544332 2222111 11111
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
.......+..++.+|..||++||++|||++++|+|+||+...
T Consensus 259 -------------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 259 -------------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred -------------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 011123467899999999999999999999999999998764
No 45
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.2e-51 Score=386.17 Aligned_cols=260 Identities=25% Similarity=0.357 Sum_probs=220.1
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
....++|.+.+.||+|+||+||+|++..+++.||+|++..... .......+.+|+.+++.++||||++++++|.+++.+
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 93 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV 93 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence 3346889999999999999999999999999999999976432 222334577899999999999999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+||||+. |+|...+.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+++......
T Consensus 94 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 99999998 5777777654 458999999999999999999999999999999999999999999999999998764322
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
...+|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.....
T Consensus 173 ---~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------------- 232 (329)
T PTZ00263 173 ---FTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL---------------- 232 (329)
T ss_pred ---ceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc----------------
Confidence 34578999999999976 5689999999999999999999999988777666655543200
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP 300 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~ 300 (397)
.+...++..+++||.+||+.||.+|++ ++++++||||.+..+.
T Consensus 233 ------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 233 ------------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred ------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 011234789999999999999999997 7999999999875543
No 46
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.4e-50 Score=377.41 Aligned_cols=294 Identities=43% Similarity=0.793 Sum_probs=247.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHL 88 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~l 88 (397)
.++|.+.+.||.|+||.||+|.+..+|+.||+|.+..............+|+.++++++|+||+++++++... +.+|+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 5789999999999999999999999999999999976554444444567899999999999999999998654 57899
Q ss_pred EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||||++++|..++......+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++..........
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 165 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM 165 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC
Confidence 99999999998888766679999999999999999999999999999999999999999999999999998876544444
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++......|++....+....+
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
T cd07845 166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF 245 (309)
T ss_pred CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccc
Confidence 44556788999999977667899999999999999999999999999999999999998888777777766555443322
Q ss_pred ccc--cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 015948 249 QYV--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTEPN 304 (397)
Q Consensus 249 ~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~ 304 (397)
... ....+...++..++++.+||.+||..||++|||+++++.||||...+++..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~ 303 (309)
T cd07845 246 TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPE 303 (309)
T ss_pred cccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCC
Confidence 221 11122233445689999999999999999999999999999999877765443
No 47
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.7e-50 Score=374.70 Aligned_cols=282 Identities=50% Similarity=0.870 Sum_probs=238.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|.+.+.||+|++|.||+|.+..++..||+|++............+.+|+.+++.++||||+++++++.+++.+|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 58999999999999999999999999999999876544444445677899999999999999999999999999999999
Q ss_pred cccCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 93 METDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 93 ~~g~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
++++|...+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++............
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (285)
T cd07861 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH 160 (285)
T ss_pred CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence 9999988886543 56899999999999999999999999999999999999999999999999999876555444455
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc-c
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-Q 249 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~ 249 (397)
..++..|+|||++.+...++.++|+|||||++|+|++|++||.+.+..+.+..+...++......|+....+.++... .
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (285)
T cd07861 161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFP 240 (285)
T ss_pred CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhcc
Confidence 677888999999877566889999999999999999999999999888888888888877766667655444332211 1
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.............+++++++||.+||..||.+|||+.++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 241 KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 111112233345679999999999999999999999999999997
No 48
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-53 Score=361.79 Aligned_cols=291 Identities=42% Similarity=0.752 Sum_probs=252.7
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------- 82 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 82 (397)
....|+.+.+||+|.||.||+|+.+++|+.||+|++.....++..-..+++|+++|..|+|+|++.+++.+..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 4677999999999999999999999999999999988777778888889999999999999999999987743
Q ss_pred -CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 83 -KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 83 -~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
...+|+||.+|+.||..++-.....++..+++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||+|+.+
T Consensus 95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 3359999999999999999888888999999999999999999999999999999999999999999999999999876
Q ss_pred CCCC----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 162 GSPD----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 162 ~~~~----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
.... ..++..+.|.||++||.++|.+.|+.+.|||..|||+.||++|.|.|.++++..++..|....|..++..||
T Consensus 175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence 5432 346677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccccCC--CccccC-----CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 238 DLAYLPDYVEYQYVAAP--PLRSLF-----PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 238 ~~~~~~~~~~~~~~~~~--~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
+...++-+........+ ..+.+. -.-++++.||+.+||..||.+|+++.+++.|.||...+.|
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 98776554433211100 011110 0125789999999999999999999999999999865543
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-50 Score=382.96 Aligned_cols=253 Identities=26% Similarity=0.390 Sum_probs=213.2
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g- 95 (397)
+.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++.++||||++++++|..++.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 479999999999999999999999999976432 222234567899999999999999999999999999999999985
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCc
Q 015948 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175 (397)
Q Consensus 96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~ 175 (397)
+|...+.. +..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus 81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 159 (323)
T cd05571 81 ELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCc
Confidence 67666655 44689999999999999999999999999999999999999999999999999986544444445567899
Q ss_pred eeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (397)
Q Consensus 176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (397)
.|+|||++.+ ..++.++|||||||++|||++|..||.+.+.......+...-
T Consensus 160 ~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~--------------------------- 211 (323)
T cd05571 160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--------------------------- 211 (323)
T ss_pred cccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------------------------
Confidence 9999999976 568999999999999999999999998776655554443210
Q ss_pred ccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948 256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP 300 (397)
Q Consensus 256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~ 300 (397)
..+...+++++.+||.+||..||++|| ++.++++||||.+..+.
T Consensus 212 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~ 260 (323)
T cd05571 212 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQ 260 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 011234589999999999999999999 89999999999886543
No 50
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-51 Score=378.02 Aligned_cols=278 Identities=30% Similarity=0.538 Sum_probs=228.7
Q ss_pred ccChhhh-cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-----C---CCeeE
Q 015948 5 DLSKKVA-DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-----S---PHIIE 75 (397)
Q Consensus 5 ~~~~~~~-~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-----h---p~iv~ 75 (397)
-+++.+. .||.++++||+|.|+|||+|+|+.+.++||+|+++- ...+.+.++.||++|++++ | .+||+
T Consensus 70 ~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~ 146 (590)
T KOG1290|consen 70 RIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ 146 (590)
T ss_pred eccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence 4566676 999999999999999999999999999999999863 3344557889999999983 2 57999
Q ss_pred EEeeeec----CCeEEEEEEccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEE-----
Q 015948 76 LIDAFPH----KGNLHLVFEFMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLI----- 144 (397)
Q Consensus 76 l~~~~~~----~~~~~lv~e~~~g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl----- 144 (397)
|+|.|.. +.++|||+|+++.+|+.+|++.+. .++...+++|++|||.||+|||.+ ||||.||||+|||+
T Consensus 147 LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~ 226 (590)
T KOG1290|consen 147 LLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEI 226 (590)
T ss_pred eeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecccc
Confidence 9999965 459999999999999999988643 499999999999999999999965 89999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 015948 145 -------------------------------------------------------------------------------- 144 (397)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (397)
T Consensus 227 ~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~ 306 (590)
T KOG1290|consen 227 DPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNE 306 (590)
T ss_pred chhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccc
Confidence
Q ss_pred -------------------------------c------------------------------------------------
Q 015948 145 -------------------------------G------------------------------------------------ 145 (397)
Q Consensus 145 -------------------------------~------------------------------------------------ 145 (397)
.
T Consensus 307 ~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~ 386 (590)
T KOG1290|consen 307 PRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPL 386 (590)
T ss_pred cCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCC
Confidence 0
Q ss_pred --cCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC------Cc
Q 015948 146 --SHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS------SD 217 (397)
Q Consensus 146 --~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~------~~ 217 (397)
.+-+|||+|||.|+++ ...++..+.|+.|+|||++.| ..|++.+||||++|++|||+||..+|... .+
T Consensus 387 ~~~di~vKIaDlGNACW~---~khFT~DIQTRQYRapEVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rD 462 (590)
T KOG1290|consen 387 PECDIRVKIADLGNACWV---HKHFTEDIQTRQYRAPEVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRD 462 (590)
T ss_pred CccceeEEEeeccchhhh---hhhhchhhhhhhccCcceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCcc
Confidence 0013899999999985 556788999999999999999 56999999999999999999999999754 37
Q ss_pred HHHHHHHHHHhCCCCCC-------------------------CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHH
Q 015948 218 IDQLGKIFAAFGTATPS-------------------------QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLS 272 (397)
Q Consensus 218 ~~~~~~i~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 272 (397)
.++++.|++.+|..+.. .|+....+.+.+.+.. .-..++.+||.
T Consensus 463 EDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~-----------e~A~~fsdFL~ 531 (590)
T KOG1290|consen 463 EDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSE-----------EDAQQFSDFLS 531 (590)
T ss_pred HHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCH-----------HHHHHHHHHHH
Confidence 89999999999875432 2221111111111111 11356789999
Q ss_pred HhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 273 KMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 273 ~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
-||+++|++|+||.++|+|||+.....+
T Consensus 532 PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 532 PMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred HHHhcCccccccHHHHhcCccccCCCCC
Confidence 9999999999999999999999876554
No 51
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.9e-50 Score=384.13 Aligned_cols=283 Identities=34% Similarity=0.548 Sum_probs=224.0
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---- 84 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---- 84 (397)
.+.++|++.+.||+|+||.||+|++..+|..||+|++............+.+|+.+++.++||||++++++|...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 5689999999999999999999999999999999999765444444556778999999999999999999986543
Q ss_pred --eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 85 --NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 85 --~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
.+|+||||++++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 5799999999998887753 38899999999999999999999999999999999999999999999999997653
Q ss_pred CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC-
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY- 241 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~- 241 (397)
. ........+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+....+.....
T Consensus 175 ~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (359)
T cd07876 175 T-NFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT 252 (359)
T ss_pred c-CccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3 223345678889999999976 5689999999999999999999999999888877777776665433211100000
Q ss_pred -------Cccccc------cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 242 -------LPDYVE------YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 242 -------~~~~~~------~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.+.... +.....+.........+.++++||.+||..||++|||+.|+|+||||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 000000 0000000111112234788999999999999999999999999999975
No 52
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-51 Score=386.11 Aligned_cols=257 Identities=28% Similarity=0.478 Sum_probs=237.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe-EEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-LHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~-~~lv 89 (397)
.++|.+++++|+|+||.+++++++..++.|++|.+......+.....+.+|+.+++++.|||||.+.+.|..++. +|||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 468999999999999999999999999999999999988887777788999999999999999999999999888 9999
Q ss_pred EEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 90 FEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|+||+ |++.+.+.+++ ..++++.+..|+.||+.|+.|||+++|+|||||+.||+++.++.|||+|||+|+.++.....
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 99999 58888887776 67999999999999999999999999999999999999999999999999999999887778
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
..+.+||+.||+||++.+ .+|+.++|||||||++|||++-++.|.+.+-.....+|+.....+.+.
T Consensus 163 a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~------------- 228 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPS------------- 228 (426)
T ss_pred hheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCc-------------
Confidence 888999999999999987 789999999999999999999999999999999999998876444333
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
..|.+++.+|..||..+|..||++.++|.+|...
T Consensus 229 --------------~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 229 --------------MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred --------------cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 3489999999999999999999999999998764
No 53
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-50 Score=374.62 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=216.9
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.|.+.+.||+|+||+||+|.+..+|+.||+|.+....... .....+.+|+.+++.++|+||++++++|.+++.+|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3889999999999999999999999999999987654322 223356789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|+. |+|...+... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ....
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 159 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-ETVR 159 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-Ceec
Confidence 998 5777666543 345899999999999999999999999999999999999999999999999999875332 2334
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..+|+..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+........
T Consensus 160 ~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------- 221 (285)
T cd05631 160 GRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ----------------- 221 (285)
T ss_pred CCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc-----------------
Confidence 5678999999999976 5689999999999999999999999987765443333333221110
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPT 301 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~ 301 (397)
..+...++.++.+||.+||+.||.+|++ ++++++||||.+..+..
T Consensus 222 -------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~ 271 (285)
T cd05631 222 -------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKR 271 (285)
T ss_pred -------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHH
Confidence 1122345899999999999999999997 89999999998866543
No 54
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.9e-51 Score=378.12 Aligned_cols=256 Identities=26% Similarity=0.343 Sum_probs=217.9
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.++..+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 4799999999999999999999999999999998754321 223345678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||+. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++...... ..
T Consensus 81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~ 156 (291)
T cd05612 81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TW 156 (291)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---cc
Confidence 9998 5788877654 45899999999999999999999999999999999999999999999999999876432 23
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..+|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+...-.
T Consensus 157 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-------------------- 215 (291)
T cd05612 157 TLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL-------------------- 215 (291)
T ss_pred cccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--------------------
Confidence 4568899999999876 5689999999999999999999999998877666666543210
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP 300 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~ 300 (397)
.+...++..+++||.+||+.||.+|++ ++++++||||....+.
T Consensus 216 --------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 216 --------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred --------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 112234789999999999999999995 9999999999876553
No 55
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.5e-51 Score=391.24 Aligned_cols=286 Identities=34% Similarity=0.575 Sum_probs=230.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----eEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NLH 87 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----~~~ 87 (397)
+|.+.+.||+|+||+||+|.+..+|+.||||++............+.+|+.+|+.++|+||+++++++.... .+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478999999999999999999999999999998654333233346778999999999999999999998776 899
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-C
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-R 166 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~ 166 (397)
+||||+.++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 lv~e~~~~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQSDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeeccccCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 99999999998888654 459999999999999999999999999999999999999999999999999998754332 2
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC-ccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL-PDY 245 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ 245 (397)
......+++.|+|||++.+...++.++|||||||++|||++|++||.+.+..+++..+...++.+....+...... ...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 2344567889999999987667899999999999999999999999999999999998888776554322111000 000
Q ss_pred cccccccCCC---ccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 246 VEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 246 ~~~~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
........+. ...+....++++.+||.+||+.||++|||+.|+|+||||.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 296 (372)
T cd07853 240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRL 296 (372)
T ss_pred HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcc
Confidence 0000000111 11223456899999999999999999999999999999987543
No 56
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-50 Score=388.49 Aligned_cols=279 Identities=25% Similarity=0.326 Sum_probs=218.2
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||.||+|++..+++.||+|.... ..+.+|+.+|++++||||++++++|..+...|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 3679999999999999999999999999999997431 24568999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC-CCccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP-DRRFT 169 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~-~~~~~ 169 (397)
|++.++|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..... .....
T Consensus 163 e~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 163 PRYKTDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred ecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 999999988887653 5899999999999999999999999999999999999999999999999999754322 22334
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC-------CcHHHHHHHHHHhCCCCCCCCCCCC-C
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-------SDIDQLGKIFAAFGTATPSQWPDLA-Y 241 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~-~ 241 (397)
..+||+.|+|||++.+ ..++.++|||||||++|||++|..||... ....++..++...+..+.....+.. .
T Consensus 242 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 242 GWAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred cccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 5678999999999976 56899999999999999999998665432 2345666677766654322111100 0
Q ss_pred Ccccc-c--cccccCCCcc---ccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 242 LPDYV-E--YQYVAAPPLR---SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 242 ~~~~~-~--~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
+.... . ......+..+ .....++.++.+||.+||++||.+|||++|+|+||||...+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~ 384 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence 00000 0 0000000000 111235678999999999999999999999999999987543
No 57
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.9e-50 Score=384.09 Aligned_cols=263 Identities=25% Similarity=0.369 Sum_probs=215.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|++.+.||+|+||+||+|++..+++.||||++.+.... ......+.+|+.++..++|+||+++++.|.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 5799999999999999999999999999999999764322 223345678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC---
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--- 166 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--- 166 (397)
|||+ |+|...+.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 9998 4777777654 4599999999999999999999999999999999999999999999999999875432110
Q ss_pred --------------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 015948 167 --------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG 214 (397)
Q Consensus 167 --------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 214 (397)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0124578999999999976 5689999999999999999999999998
Q ss_pred CCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCC---CCCCHHHHhcC
Q 015948 215 SSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPK---ARITAQQALEH 291 (397)
Q Consensus 215 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~---~R~t~~e~l~h 291 (397)
.+..+...++........ . ++ ...+++++++||.+|+. +|. .||+++|+++|
T Consensus 239 ~~~~~~~~~i~~~~~~~~---~-----------------p~----~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVMNWKETLI---F-----------------PP----EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHHcCcCccc---C-----------------CC----cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 887776666654211000 0 00 01358999999999775 555 45899999999
Q ss_pred CCCCCCCCCC
Q 015948 292 RYFSSAPLPT 301 (397)
Q Consensus 292 p~~~~~~~~~ 301 (397)
|||.+..+..
T Consensus 294 p~f~~~~~~~ 303 (363)
T cd05628 294 PFFEGVDWEH 303 (363)
T ss_pred CCCCCCCHHH
Confidence 9999876543
No 58
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.9e-50 Score=382.61 Aligned_cols=264 Identities=26% Similarity=0.358 Sum_probs=221.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||+||+|++..+|+.||+|++..... .......+.+|+.+++.++|+||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 479999999999999999999999999999999986543 2223345668999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~ 168 (397)
||++ |+|.+++.+....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..+..... ..
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 160 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS 160 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence 9997 688888877656799999999999999999999999999999999999999999999999999987654332 22
Q ss_pred cccccCceeeChhcccC-----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 169 THQVFARWYRAPELLFG-----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
....||+.|+|||++.. ...++.++|||||||++|+|++|..||...+....+..+...... ..++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~------ 231 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF---LKFP------ 231 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc---cCCC------
Confidence 34568899999999863 345789999999999999999999999988777766666542110 0000
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
..+.++.++.+||.+||. ||++|||++++++||||....+.
T Consensus 232 ---------------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~ 272 (330)
T cd05601 232 ---------------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWN 272 (330)
T ss_pred ---------------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHH
Confidence 113468999999999998 99999999999999999876543
No 59
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-51 Score=372.77 Aligned_cols=257 Identities=29% Similarity=0.516 Sum_probs=228.4
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
..+.-+|++.+.||+|.||.|-+|++...|+.||||.|++.+.+. .....+.+||+||..|+||||+.+|+.|++.+.+
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI 128 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence 456789999999999999999999999999999999999887544 3445678999999999999999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
.|||||.. |+|++++.+++ .|++.+++.+++||..|+.|||+++++|||||.+|||+|.++++||+|||++..+.. .
T Consensus 129 vivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~-~ 206 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD-K 206 (668)
T ss_pred EEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc-c
Confidence 99999998 68999888765 599999999999999999999999999999999999999999999999999987744 5
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
....+.||++.|.+||++.|..+-+..+|.|||||+||.|+.|..||+|.+......+|-.+--..
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE-------------- 272 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE-------------- 272 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC--------------
Confidence 677889999999999999997777999999999999999999999999998877777775441111
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
|.-+.++.-||+.||..||++|.|+++|-.|=|..
T Consensus 273 ---------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 273 ---------------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ---------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 12256789999999999999999999999996653
No 60
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.5e-50 Score=382.88 Aligned_cols=284 Identities=33% Similarity=0.547 Sum_probs=227.9
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 83 (397)
.+.++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 467899999999999999999999999999999999876544444445677899999999999999999987543
Q ss_pred -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
..+|+||||++++|...+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 36899999999999888754 37899999999999999999999999999999999999999999999999998754
Q ss_pred CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. .......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..++..++.+.+..+......
T Consensus 178 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 178 TS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred CC-CcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 32 23345678899999999976 56899999999999999999999999999998888888887776554322221100
Q ss_pred --------cccccc------ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 243 --------PDYVEY------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 243 --------~~~~~~------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
+.+..+ .....+.........+..+++||.+||+.||.+|||+.|+|+||||...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 000000 0000011111122346789999999999999999999999999999753
No 61
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.6e-50 Score=384.02 Aligned_cols=261 Identities=26% Similarity=0.417 Sum_probs=215.7
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|++.+.||+|+||+||+|++..+|+.||||++...... ......+.+|+.+|+.++||||++++++|.+++++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4799999999999999999999999999999999764322 223345678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC---
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--- 166 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--- 166 (397)
|||. |+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+.....
T Consensus 81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 9998 5677777654 4599999999999999999999999999999999999999999999999999876432110
Q ss_pred -----------------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCC
Q 015948 167 -----------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF 211 (397)
Q Consensus 167 -----------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~p 211 (397)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|.+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCC
Confidence 1113468999999999876 5689999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHH
Q 015948 212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQA 288 (397)
Q Consensus 212 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~ 288 (397)
|.+.+..+....+....... ..+ ....+++++++||.+||. +|.+|++ ++|+
T Consensus 239 f~~~~~~~~~~~i~~~~~~~---~~~---------------------~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l 293 (364)
T cd05599 239 FCSDNPQETYRKIINWKETL---QFP---------------------DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI 293 (364)
T ss_pred CCCCCHHHHHHHHHcCCCcc---CCC---------------------CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence 99887766665554321000 000 001358999999999997 9999998 9999
Q ss_pred hcCCCCCCCCC
Q 015948 289 LEHRYFSSAPL 299 (397)
Q Consensus 289 l~hp~~~~~~~ 299 (397)
++||||....+
T Consensus 294 l~h~~~~~~~~ 304 (364)
T cd05599 294 KSHPFFKGVDW 304 (364)
T ss_pred hcCCCcCCCCH
Confidence 99999987654
No 62
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-51 Score=378.48 Aligned_cols=263 Identities=28% Similarity=0.455 Sum_probs=239.5
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.++.+-|.+.+.||+|.|++|.+|+|--+|..||||++.+.+........+++|+..|+.++|||||+||+....+..+|
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKly 93 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLY 93 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEE
Confidence 45788899999999999999999999999999999999998887777778899999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEc-cCCcEEEeeeccceeeCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG-SHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~-~~~~~kl~DFG~a~~~~~~~ 165 (397)
+|+|+-. |+|.++|.+....+.|..++.|++||+.|+.|||+..+|||||||+||.+- .-|-+||+|||++..+. +.
T Consensus 94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-PG 172 (864)
T KOG4717|consen 94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-PG 172 (864)
T ss_pred EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-Cc
Confidence 9999988 699999999988899999999999999999999999999999999998765 56899999999998874 45
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
....+.||+..|.|||+|+|..+..+++||||||||||-|++|++||+..++.+.+-.|+.+-
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK----------------- 235 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK----------------- 235 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc-----------------
Confidence 677889999999999999997777789999999999999999999999999999988887641
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
...+..+|.++++||..||..||++|.+.+||..|+|++....
T Consensus 236 -----------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 236 -----------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred -----------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 1223456999999999999999999999999999999987643
No 63
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6.4e-50 Score=386.23 Aligned_cols=262 Identities=26% Similarity=0.360 Sum_probs=212.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.|++++.||+|+||+||+|++..+++.||||++..... .......+.+|+.+++.++|+||++++++|.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 58999999999999999999999999999999976432 22333457789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-----
Q 015948 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----- 165 (397)
Q Consensus 92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----- 165 (397)
||+ |+|..++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|++||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 82 YIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 998 5777777654 458999999999999999999999999999999999999999999999999976431100
Q ss_pred ------------------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHH
Q 015948 166 ------------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFA 203 (397)
Q Consensus 166 ------------------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ 203 (397)
......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILF 239 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHHH
Confidence 00123578999999999976 56899999999999999
Q ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCc--CCCC
Q 015948 204 ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTY--DPKA 281 (397)
Q Consensus 204 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~--dP~~ 281 (397)
||++|.+||...+..+....+....... .+ .....+++++++||.+||.. ++..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~---------------------~~~~~~s~~~~dli~~ll~~~~~~~~ 295 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTL---HI---------------------PPQVKLSPEAVDLITKLCCSAEERLG 295 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHcccccc---CC---------------------CCCCCCCHHHHHHHHHHccCcccccC
Confidence 9999999998877665555543211100 00 01124589999999996644 5555
Q ss_pred CCCHHHHhcCCCCCCCCCC
Q 015948 282 RITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 282 R~t~~e~l~hp~~~~~~~~ 300 (397)
|++++++++||||....+.
T Consensus 296 R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 296 RNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred CCCHHHHhcCcccCCCChh
Confidence 9999999999999876553
No 64
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.1e-50 Score=383.23 Aligned_cols=284 Identities=35% Similarity=0.611 Sum_probs=228.6
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 83 (397)
.+.++|.+.+.||+|+||+||+|.+..+++.||||++............+.+|+.+|+.++|+||++++++|...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 467899999999999999999999999999999999875443333334567899999999999999999988543
Q ss_pred -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
..+|+++|+++++|...+... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred cCcEEEEeecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 357999999988988777543 49999999999999999999999999999999999999999999999999998754
Q ss_pred CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
. .....++++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+...+..+.....-
T Consensus 170 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 170 D---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred C---CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence 3 2345578999999999987667899999999999999999999999998888888888777665443222111000
Q ss_pred cc--cc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 243 PD--YV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 243 ~~--~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
.. +. .........+...+...++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred hHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 00 00 000111122333445668889999999999999999999999999999764
No 65
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.7e-49 Score=379.86 Aligned_cols=284 Identities=33% Similarity=0.542 Sum_probs=226.5
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 83 (397)
.+.++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 468999999999999999999999999999999999876544444445677899999999999999999988543
Q ss_pred -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
..+|+||||+++++...+.. .+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 35799999999998887754 38899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. .......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....++..++...+..+......
T Consensus 171 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 171 TS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred Cc-cccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 32 23345678899999999976 56899999999999999999999999998888888887777665544322211100
Q ss_pred --------cccccc------ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 243 --------PDYVEY------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 243 --------~~~~~~------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
+.+... .....+.........+.++++||.+||..||++|||+.|+|+||||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 000000 0000011111223346789999999999999999999999999999743
No 66
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-49 Score=374.58 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=212.7
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHH---HhcCCCCeeEEEeeeecCCeEEEE
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLL---KELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l---~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
|.+.+.||+|+||.||+|.+..+|+.||||++.+.... ......+.+|+.++ +.++||||++++++|.+++++|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999764321 22233455666554 566899999999999999999999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|||++| +|...+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT 158 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc
Confidence 999995 66666543 358999999999999999999999999999999999999999999999999987644333444
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
...+|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 159 ~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~------------------- 218 (324)
T cd05589 159 STFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV------------------- 218 (324)
T ss_pred cccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------
Confidence 55678999999999976 5689999999999999999999999998877766666543210
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
.....++.++.+||.+||+.||.+|| ++.++++||||.+..+
T Consensus 219 ---------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~ 265 (324)
T cd05589 219 ---------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW 265 (324)
T ss_pred ---------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence 11134589999999999999999999 7999999999987654
No 67
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.4e-49 Score=368.92 Aligned_cols=284 Identities=46% Similarity=0.803 Sum_probs=239.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCe-----
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGN----- 85 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~----- 85 (397)
++|.+.+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++.+. |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 5799999999999999999999999999999998766544444556788999999995 5999999999876665
Q ss_pred EEEEEEccccCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeecccee
Q 015948 86 LHLVFEFMETDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARI 160 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~ 160 (397)
.|+||||++++|..++.... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++..
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 89999999999988886542 35899999999999999999999999999999999999998 88999999999987
Q ss_pred eCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948 161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 161 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
+...........+++.|+|||++.+...++.++|+|||||++|+|++|.+||.+.++...+..++..++......|+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 65544445556678889999998766678999999999999999999999999999988888888887776666666554
Q ss_pred CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
.......+............+.++..+.+||.+||..||.+||++.|++.||||.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 4444333332223333444567899999999999999999999999999999984
No 68
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.3e-50 Score=381.62 Aligned_cols=262 Identities=29% Similarity=0.456 Sum_probs=221.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||+||+|++..+|+.||||++....... .....+.+|+.++..++|+||++++++|.+++++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 57999999999999999999999999999999997653222 33445678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---- 165 (397)
||+. |+|..++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 9997 5788887765 569999999999999999999999999999999999999999999999999998765433
Q ss_pred -------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015948 166 -------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ 220 (397)
Q Consensus 166 -------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 220 (397)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 23345678999999999977 5789999999999999999999999998887666
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-HHHHhcCCCCCCCCC
Q 015948 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-AQQALEHRYFSSAPL 299 (397)
Q Consensus 221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-~~e~l~hp~~~~~~~ 299 (397)
..++......... .....+++++.+||.+||. ||.+|++ ++++++||||....+
T Consensus 239 ~~~i~~~~~~~~~------------------------p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~ 293 (350)
T cd05573 239 YNKIINWKESLRF------------------------PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDW 293 (350)
T ss_pred HHHHhccCCcccC------------------------CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCH
Confidence 6665442111000 0011258999999999997 9999999 999999999987655
Q ss_pred C
Q 015948 300 P 300 (397)
Q Consensus 300 ~ 300 (397)
.
T Consensus 294 ~ 294 (350)
T cd05573 294 E 294 (350)
T ss_pred H
Confidence 3
No 69
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.7e-49 Score=366.68 Aligned_cols=283 Identities=49% Similarity=0.910 Sum_probs=244.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|.+.+.||.|+||.||+|.+..+|..||+|++............+.+|+.++++++|+||+++++++..+..+|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 58999999999999999999999999999999987654444455688999999999999999999999999999999999
Q ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cccccc
Q 015948 93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQ 171 (397)
Q Consensus 93 ~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~~~~ 171 (397)
++++|...+......+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (286)
T cd07832 81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ 160 (286)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccc
Confidence 9779999888766779999999999999999999999999999999999999999999999999998765433 234456
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
.++.+|+|||++.+...++.++|||||||++|+|++|.++|.+.++...+..+...++...+..|+....+.++....+.
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07832 161 VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFP 240 (286)
T ss_pred cCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCC
Confidence 78889999999877666799999999999999999999999999999999999998888877777766555444332222
Q ss_pred cC--CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 252 AA--PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 252 ~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
.. ..+...++..+.++.+||.+||..||.+|||++++++||||.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 241 ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 22 223455667789999999999999999999999999999984
No 70
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.1e-50 Score=380.10 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=218.2
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCC-cEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
-.++|.+.+.||+|+||.||+|.+..++ ..||+|++..... .......+.+|+.+++.++||||++++++|.+.+.+|
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 3678999999999999999999876655 6899999875432 2223345678999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+||||+. |+|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 108 lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-- 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-- 184 (340)
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--
Confidence 9999997 5777777654 45899999999999999999999999999999999999999999999999999876432
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
....+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.......+.....
T Consensus 185 -~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~----------------- 245 (340)
T PTZ00426 185 -TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII----------------- 245 (340)
T ss_pred -cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-----------------
Confidence 234678999999999976 5689999999999999999999999998877666666543210
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP 300 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~ 300 (397)
.+.+.+++.+.+||.+||+.||++|+ +++++++||||.+..+.
T Consensus 246 -----------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~ 293 (340)
T PTZ00426 246 -----------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV 293 (340)
T ss_pred -----------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 11234588999999999999999995 89999999999876543
No 71
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.8e-50 Score=386.76 Aligned_cols=261 Identities=25% Similarity=0.365 Sum_probs=213.9
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
+|++.+.||+|+||+||+|++..+++.||+|++.+... .......+.+|+.+++.++|+||+++++.|.+++.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 69999999999999999999999999999999875432 22233456789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-----
Q 015948 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----- 165 (397)
Q Consensus 92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----- 165 (397)
||+ |+|...+.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 998 5788777654 458999999999999999999999999999999999999999999999999975321000
Q ss_pred ------------------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHH
Q 015948 166 ------------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFA 203 (397)
Q Consensus 166 ------------------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ 203 (397)
......+||+.|+|||++.+ ..|+.++|||||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILY 239 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHH
Confidence 00123468999999999976 56899999999999999
Q ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC
Q 015948 204 ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283 (397)
Q Consensus 204 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ 283 (397)
||++|++||.+.+..+....+....... .. .....+++++.+||.+|+ .+|.+|+
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~---------------------p~~~~~s~~~~~li~~l~-~~p~~R~ 294 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSL---HI---------------------PPQAKLSPEASDLIIKLC-RGPEDRL 294 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCc---CC---------------------CCcccCCHHHHHHHHHHc-cCHhHcC
Confidence 9999999999887766655554321100 00 011345899999999987 5999999
Q ss_pred C---HHHHhcCCCCCCCCCC
Q 015948 284 T---AQQALEHRYFSSAPLP 300 (397)
Q Consensus 284 t---~~e~l~hp~~~~~~~~ 300 (397)
+ ++++++||||....+.
T Consensus 295 ~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 295 GKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred CCCCHHHHhcCCCcCCcChH
Confidence 7 9999999999876543
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.6e-49 Score=373.10 Aligned_cols=252 Identities=27% Similarity=0.390 Sum_probs=212.1
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||+||+|+++.+++.||||++.+... .......+.+|+.++..+ +||||++++++|...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999999999999999999976432 223334566788888876 699999999999999999999999985
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.............||
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGT 159 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccC
Confidence 777666554 459999999999999999999999999999999999999999999999999988654333444556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~------------------------- 213 (320)
T cd05590 160 PDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV------------------------- 213 (320)
T ss_pred ccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC-------------------------
Confidence 99999999976 5689999999999999999999999998887776666543210
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCH------HHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA------QQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~------~e~l~hp~~~~~~~ 299 (397)
.....++.++++||.+||+.||++|+++ +++++||||....+
T Consensus 214 ---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 214 ---VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred ---CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 1112358899999999999999999998 99999999987654
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-49 Score=383.39 Aligned_cols=261 Identities=28% Similarity=0.401 Sum_probs=213.2
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||+||+|.+..+++.||||++.+... .......+.+|+.+++.++||||++++++|.+..++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 579999999999999999999999999999999875432 2222345678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC---
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--- 166 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--- 166 (397)
|||+ |+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 9998 5787777654 4589999999999999999999999999999999999999999999999999964311000
Q ss_pred --------------------------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHH
Q 015948 167 --------------------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIF 202 (397)
Q Consensus 167 --------------------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il 202 (397)
.....+||+.|+|||++.+ ..++.++|||||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil 238 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIM 238 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhh
Confidence 0012468999999999976 5689999999999999
Q ss_pred HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCC
Q 015948 203 AELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282 (397)
Q Consensus 203 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 282 (397)
|||++|.+||.+.+..+.+..+...... -.+++ ...++.++++||.+||. +|.+|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~---------------------~~~~s~~~~dli~~lL~-~~~~r 293 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRET---LYFPD---------------------DIHLSVEAEDLIRRLIT-NAENR 293 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCc---cCCCC---------------------CCCCCHHHHHHHHHHhc-CHhhc
Confidence 9999999999988776666655432100 00110 11358899999999998 77765
Q ss_pred ---CCHHHHhcCCCCCCCCC
Q 015948 283 ---ITAQQALEHRYFSSAPL 299 (397)
Q Consensus 283 ---~t~~e~l~hp~~~~~~~ 299 (397)
+++.|++.||||.+..+
T Consensus 294 ~~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 294 LGRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred CCCCCHHHHhcCCCcCCCCH
Confidence 59999999999987554
No 74
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.9e-49 Score=373.57 Aligned_cols=274 Identities=38% Similarity=0.699 Sum_probs=215.4
Q ss_pred eeeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeEEEEEEc
Q 015948 17 REVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHLVFEF 92 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~lv~e~ 92 (397)
.++||+|+||+||+|+++ .+++.||+|.+.... ....+.+|+.+|+.++||||++++++|.. +..+|+||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999865 467899999986432 23356789999999999999999999844 5678999999
Q ss_pred cccCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE----ccCCcEEEeeecccee
Q 015948 93 METDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARI 160 (397)
Q Consensus 93 ~~g~L~~~~~~~--------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl----~~~~~~kl~DFG~a~~ 160 (397)
++++|...+... ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 999998887542 2248999999999999999999999999999999999999 4567899999999987
Q ss_pred eCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---------HHHHHHHHHHh
Q 015948 161 FGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------IDQLGKIFAAF 228 (397)
Q Consensus 161 ~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~ 228 (397)
...... .....++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+... .+.+..++..+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 654322 234567899999999998766789999999999999999999999976543 46677788887
Q ss_pred CCCCCCCCCCCCCCccccccc------cccCC----CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 229 GTATPSQWPDLAYLPDYVEYQ------YVAAP----PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~------~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
+.+....|.+....+...... ..... .+.......+.++.+||.+||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 777666665543332211100 00000 0111112346789999999999999999999999999998
No 75
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.1e-49 Score=377.81 Aligned_cols=263 Identities=28% Similarity=0.407 Sum_probs=219.6
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||.||+|++..+++.||||++.+.... ......+.+|+.+++.++||||+++++++.+.+++|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 4799999999999999999999999999999999765322 223345678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++ |+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... ...
T Consensus 81 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~ 156 (333)
T cd05600 81 EYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YAN 156 (333)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccC
Confidence 9998 5777777654 4589999999999999999999999999999999999999999999999999986543 334
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..+|++.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+..+....+.........
T Consensus 157 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------- 219 (333)
T cd05600 157 SVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR---------------- 219 (333)
T ss_pred CcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC----------------
Confidence 5678999999999977 47899999999999999999999999988777666655432111000
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
+........+++++.+||.+||..+|.+|++++++++||||....+
T Consensus 220 ----~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 220 ----PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred ----CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence 0000001346899999999999999999999999999999987544
No 76
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.4e-49 Score=372.03 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=211.4
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
+.||+|+||+||+|++..+++.||||++.+... .......+.+|+.++..+ +||||++++++|.+.+.+|+||||+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999999999999999999986532 222233456788999888 69999999999999999999999998
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
|+|...+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+|+
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~ 159 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGT 159 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecC
Confidence 4677666654 459999999999999999999999999999999999999999999999999997643333344456789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~-------------------------- 212 (318)
T cd05570 160 PDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE-------------------------- 212 (318)
T ss_pred ccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence 99999999976 568999999999999999999999998877666555543210
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLP 300 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~ 300 (397)
..+...++.++.+||.+||..||.+||++ .++++||||....+.
T Consensus 213 --~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 213 --VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred --CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 01112458899999999999999999999 999999999886553
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8.5e-50 Score=377.66 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=211.3
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g- 95 (397)
+.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999999999999999999976432 222334567899999999999999999999999999999999985
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCc
Q 015948 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175 (397)
Q Consensus 96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~ 175 (397)
+|...+.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus 81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 159 (328)
T cd05593 81 ELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTP 159 (328)
T ss_pred CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCc
Confidence 67666654 44699999999999999999999999999999999999999999999999999986443333444567899
Q ss_pred eeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (397)
Q Consensus 176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (397)
.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+...-
T Consensus 160 ~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~--------------------------- 211 (328)
T cd05593 160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED--------------------------- 211 (328)
T ss_pred CccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC---------------------------
Confidence 9999999976 568999999999999999999999998776655544432110
Q ss_pred ccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
..+...++.++.+||.+||..||++|+ ++.|+++||||.+..+
T Consensus 212 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 259 (328)
T cd05593 212 -IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW 259 (328)
T ss_pred -ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 011234589999999999999999997 8999999999987654
No 78
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.3e-48 Score=362.03 Aligned_cols=283 Identities=42% Similarity=0.726 Sum_probs=229.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++.....+|+|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 57999999999999999999999999999999987654433344456789999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
|++++++..+......+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY 160 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence 99988777776666669999999999999999999999999999999999999999999999999998875544344445
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC---CCCCCCcccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW---PDLAYLPDYVEY 248 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~ 248 (397)
.++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++...+... ............
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07847 161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP 240 (286)
T ss_pred ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence 67788999999877566889999999999999999999999998888877777666554332110 000000000000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
......+.....+.++..+.+||.+||+.||++||++.|++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0001112233456678999999999999999999999999999998
No 79
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.8e-49 Score=379.66 Aligned_cols=264 Identities=25% Similarity=0.359 Sum_probs=217.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
..++|++.+.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.+++.++||||++++++|.+++.+|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 35789999999999999999999999999999999975332 22223346689999999999999999999999999999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~- 166 (397)
|||||+ |+|..++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|........
T Consensus 121 v~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 999998 5788877654 489999999999999999999999999999999999999999999999999987643322
Q ss_pred cccccccCceeeChhcccCcc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 167 RFTHQVFARWYRAPELLFGAK---QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
.....+||+.|+|||++.+.. .++.++|||||||++|+|++|.+||.+.+....+..+....... .++.
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~p~----- 270 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL---NFPE----- 270 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc---CCCC-----
Confidence 234567899999999986532 37899999999999999999999999888777776665431110 1110
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL 299 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~ 299 (397)
...++..+++||.+||..++.+ |++++|+++||||....+
T Consensus 271 ----------------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~ 312 (370)
T cd05621 271 ----------------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 312 (370)
T ss_pred ----------------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCc
Confidence 1135889999999999865544 889999999999987543
No 80
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.8e-49 Score=371.48 Aligned_cols=257 Identities=25% Similarity=0.356 Sum_probs=216.0
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~ 90 (397)
+|.+.+.||+|+||.||+|++..+++.||||++.+... .......+..|+.++..+.| ++|++++++|.+.+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 58999999999999999999999999999999976432 22233456789999999977 46888999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++ |+|...+... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++...........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 9998 5777777654 4589999999999999999999999999999999999999999999999999876443344445
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.....
T Consensus 160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-------------------- 218 (324)
T cd05587 160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-------------------- 218 (324)
T ss_pred eecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------------------
Confidence 5678999999999976 5689999999999999999999999998877766666543210
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPL 299 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~ 299 (397)
.+...++.++++||.+||..||.+|++. +++++||||....+
T Consensus 219 --------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 219 --------SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred --------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 1122458899999999999999999976 89999999987654
No 81
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.5e-49 Score=379.31 Aligned_cols=264 Identities=25% Similarity=0.323 Sum_probs=219.3
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
-.++|++.+.||+|+||+||+|++..+++.||+|++.+.... ......+.+|+.+++.++||||++++++|.++..+|+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 367899999999999999999999999999999999754322 2223346689999999999999999999999999999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~- 166 (397)
|||||+ |+|..++... .+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 121 v~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~ 198 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence 999998 5777776543 489999999999999999999999999999999999999999999999999987643322
Q ss_pred cccccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 167 RFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
.....+||+.|+|||++.+. ..++.++|||||||++|||++|.+||.+.+....+..+...... ..++
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~------ 269 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS---LTFP------ 269 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc---CCCC------
Confidence 23456789999999998653 24789999999999999999999999988877666666542110 0011
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL 299 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~ 299 (397)
....+|.++++||.+||..+|.+ |++++++++||||.+..+
T Consensus 270 ---------------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~ 312 (370)
T cd05596 270 ---------------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW 312 (370)
T ss_pred ---------------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence 11235899999999999999988 999999999999987544
No 82
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.3e-49 Score=372.97 Aligned_cols=258 Identities=25% Similarity=0.340 Sum_probs=216.9
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
+|.+.+.||+|+||.||+|++..+++.||+|++.+.... .........|..++..+ .|++|+++++++.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999865322 22223456788888877 5799999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++ |+|...+... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 9998 5787777654 4589999999999999999999999999999999999999999999999999986544344445
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+.+..+.....
T Consensus 160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~-------------------- 218 (323)
T cd05616 160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-------------------- 218 (323)
T ss_pred cCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------------
Confidence 5678999999999976 5689999999999999999999999998887776666554210
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP 300 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~ 300 (397)
.+...++.++.+||.+||+.||.+|++ ..++++||||....+.
T Consensus 219 --------~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~ 266 (323)
T cd05616 219 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE 266 (323)
T ss_pred --------CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 111245899999999999999999997 4899999999876654
No 83
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-49 Score=376.23 Aligned_cols=252 Identities=26% Similarity=0.393 Sum_probs=211.6
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g- 95 (397)
+.||+|+||.||+|++..+|..||+|++...... ......+.+|+.+++.++||||++++++|...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4799999999999999999999999999764321 22233456899999999999999999999999999999999985
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCc
Q 015948 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175 (397)
Q Consensus 96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~ 175 (397)
+|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............|++
T Consensus 81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 159 (323)
T cd05595 81 ELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCc
Confidence 66666654 44689999999999999999999999999999999999999999999999999886544334444567899
Q ss_pred eeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (397)
Q Consensus 176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (397)
.|+|||++.+ ..++.++|||||||++|||++|..||.+.+.......+....
T Consensus 160 ~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~--------------------------- 211 (323)
T cd05595 160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--------------------------- 211 (323)
T ss_pred CcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------------------------
Confidence 9999999976 568999999999999999999999998877666555543210
Q ss_pred ccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
..+...+++++.+||.+||..||++|+ ++.++++|+||....+
T Consensus 212 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~ 259 (323)
T cd05595 212 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 259 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 011234589999999999999999998 8999999999987554
No 84
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.3e-49 Score=383.61 Aligned_cols=261 Identities=24% Similarity=0.354 Sum_probs=213.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+|++.+.||+|+||+||+|++..+++.||||++.+... .......+.+|+.+|+.++|+||+++++.|.+++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 369999999999999999999999999999999865432 2223345678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---- 165 (397)
|||+ |+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 9998 5787777664 458999999999999999999999999999999999999999999999999985331000
Q ss_pred ---------------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948 166 ---------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206 (397)
Q Consensus 166 ---------------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell 206 (397)
......+||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehh
Confidence 00123578999999999976 56899999999999999999
Q ss_pred hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---
Q 015948 207 NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI--- 283 (397)
Q Consensus 207 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~--- 283 (397)
+|++||.+.+..+....+....... .. .....++.++.+||.+|+ .+|.+|+
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~---~~---------------------~~~~~~s~~~~~li~~l~-~~p~~R~~~~ 293 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTL---HI---------------------PSQAKLSREASDLILRLC-CGAEDRLGKN 293 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccc---cC---------------------CCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence 9999999887766555443210000 00 011245899999999977 5999999
Q ss_pred CHHHHhcCCCCCCCCC
Q 015948 284 TAQQALEHRYFSSAPL 299 (397)
Q Consensus 284 t~~e~l~hp~~~~~~~ 299 (397)
++.++++||||....+
T Consensus 294 t~~ell~h~~~~~~~~ 309 (376)
T cd05598 294 GADEIKAHPFFKGIDF 309 (376)
T ss_pred CHHHHhCCCCcCCCCH
Confidence 9999999999987543
No 85
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=7.9e-49 Score=372.29 Aligned_cols=295 Identities=44% Similarity=0.814 Sum_probs=250.5
Q ss_pred Chhhhcceee-eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------------ccchHHHHHHHHHhcCCCCe
Q 015948 7 SKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------------VNFTALREIKLLKELKSPHI 73 (397)
Q Consensus 7 ~~~~~~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------------~~~~~~~E~~~l~~l~hp~i 73 (397)
...+.++|.. .+.||.|+||+||+|.+..+++.||||++........ ....+.+|+.+++.++|+||
T Consensus 3 ~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 82 (335)
T PTZ00024 3 SFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI 82 (335)
T ss_pred ccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence 3457889975 5779999999999999999999999999875432221 11246789999999999999
Q ss_pred eEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEe
Q 015948 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA 153 (397)
Q Consensus 74 v~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~ 153 (397)
++++++|..++..|+||||+.|+|...+... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+
T Consensus 83 v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 83 MGLVDVYVEGDFINLVMDIMASDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred eeeeEEEecCCcEEEEEeccccCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEEC
Confidence 9999999999999999999999999888654 458999999999999999999999999999999999999999999999
Q ss_pred eeccceeeCC--------------CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 015948 154 DFGLARIFGS--------------PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID 219 (397)
Q Consensus 154 DFG~a~~~~~--------------~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 219 (397)
|||++..... .........++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.++.+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999987651 11222334567789999999776668999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
.+..++..++.+....|+.....+....+............+..+.++.+||.+||+.+|++||+++|++.||||.....
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL 321 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence 99999999888888888877766666555555555566667778999999999999999999999999999999987665
Q ss_pred CCC
Q 015948 300 PTE 302 (397)
Q Consensus 300 ~~~ 302 (397)
+-.
T Consensus 322 ~~~ 324 (335)
T PTZ00024 322 PCD 324 (335)
T ss_pred CCC
Confidence 543
No 86
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.7e-49 Score=364.18 Aligned_cols=283 Identities=42% Similarity=0.795 Sum_probs=234.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|++|+||+|.++.+++.||||.+...... .....+.+|+.+++.++|+||+++++++.++...|+||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 47899999999999999999999999999999998764322 22334678999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||+.++|.+.+......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...........
T Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (291)
T cd07844 83 EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN 162 (291)
T ss_pred ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccc
Confidence 99999999988876667899999999999999999999999999999999999999999999999998765433333334
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..++..|+|||++.+...++.++|||||||++|+|++|.+||.+.. ..+.+..+....+...+..|+............
T Consensus 163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07844 163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS 242 (291)
T ss_pred cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence 4567789999998765668899999999999999999999998766 456677777777777666666554443333222
Q ss_pred c--ccCCCccccCCCCC--HHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 250 Y--VAAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 250 ~--~~~~~~~~~~~~~s--~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
. .....+....+.++ .++.++|.+||+.||++|||+.++++||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 2 11222333444555 899999999999999999999999999998
No 87
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.2e-49 Score=374.22 Aligned_cols=249 Identities=28% Similarity=0.413 Sum_probs=210.3
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL 97 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L 97 (397)
||+|+||+||+|++..+++.||+|++..... .......+.+|+.+|+.++||||++++++|.+.+.+|+||||++ |+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 7999999999999999999999999875432 22233456789999999999999999999999999999999998 577
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (397)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y 177 (397)
...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+.|
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 159 (312)
T cd05585 81 FHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEY 159 (312)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCccc
Confidence 7777654 458999999999999999999999999999999999999999999999999998654433444556789999
Q ss_pred eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc
Q 015948 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257 (397)
Q Consensus 178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (397)
+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+.... .
T Consensus 160 ~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~----------------------------~ 210 (312)
T cd05585 160 LAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP----------------------------L 210 (312)
T ss_pred CCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC----------------------------C
Confidence 99999976 568999999999999999999999998877666555543210 0
Q ss_pred ccCCCCCHHHHHHHHHhcCcCCCCCC---CHHHHhcCCCCCCCC
Q 015948 258 SLFPSASDDALDLLSKMFTYDPKARI---TAQQALEHRYFSSAP 298 (397)
Q Consensus 258 ~~~~~~s~~~~~li~~~L~~dP~~R~---t~~e~l~hp~~~~~~ 298 (397)
.+...+++++++||.+||..||.+|+ ++.|++.||||....
T Consensus 211 ~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 211 RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 11234589999999999999999997 589999999998753
No 88
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.1e-49 Score=371.38 Aligned_cols=252 Identities=26% Similarity=0.369 Sum_probs=212.8
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||.||+|++..+++.||||++.+... .......+..|..++..+ +||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 469999999999999999999999999976432 222334466788888866 799999999999999999999999984
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..............|+
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05591 81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGT 159 (321)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccC
Confidence 777776654 458999999999999999999999999999999999999999999999999998754444445556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~------------------------- 213 (321)
T cd05591 160 PDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV------------------------- 213 (321)
T ss_pred ccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence 99999999876 5689999999999999999999999998887777766654210
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCC-------CHHHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARI-------TAQQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~-------t~~e~l~hp~~~~~~~ 299 (397)
.....++.++.+||.+||+.||++|+ +++++++||||....+
T Consensus 214 ---~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~ 262 (321)
T cd05591 214 ---LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW 262 (321)
T ss_pred ---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence 01123478999999999999999999 8999999999987544
No 89
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.9e-49 Score=365.47 Aligned_cols=282 Identities=50% Similarity=0.879 Sum_probs=236.6
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||.|+||.||+|++..+|..||||.+............+.+|++++++++||||+++++++.+++..|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 48999999999999999999999999999999876554444455678899999999999999999999999999999999
Q ss_pred cccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 93 METDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 93 ~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
+.++|...+... +..+++..++.++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++.............
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (284)
T cd07860 81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 160 (284)
T ss_pred cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence 998988887654 3458999999999999999999999999999999999999999999999999998765544445556
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-ccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQY 250 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~ 250 (397)
.++..|+|||++.+...++.++|||||||++|+|++|+.||.+.++.+.+.++...++......|+.....+.... +..
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07860 161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK 240 (284)
T ss_pred cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccc
Confidence 6788899999987766678899999999999999999999999988888888888877766555554333222111 111
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.....+....+.++.+++++|.+||+.||++|||++++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 241 WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 11222334455678999999999999999999999999999998
No 90
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.4e-49 Score=379.54 Aligned_cols=263 Identities=27% Similarity=0.408 Sum_probs=216.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|++.+.||+|+||+||+|++..+++.||+|++..... .......+.+|+.++..++|+||+++++.|.+++++|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 479999999999999999999999999999999975432 2233445678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---- 165 (397)
|||+ |+|..++.+. ..+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||++..+....
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 9998 4777777654 458999999999999999999999999999999999999999999999999987542211
Q ss_pred -------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 015948 166 -------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG 214 (397)
Q Consensus 166 -------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 214 (397)
......+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCC
Confidence 01124578999999999976 6689999999999999999999999998
Q ss_pred CCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---CHHHHhcC
Q 015948 215 SSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---TAQQALEH 291 (397)
Q Consensus 215 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---t~~e~l~h 291 (397)
.+.......+....... .++ + ...++.++++||.+|+. ||.+|+ +++++++|
T Consensus 239 ~~~~~~~~~i~~~~~~~---~~p-----------------~----~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRKVMNWKETL---VFP-----------------P----EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHHHHcCCCce---ecC-----------------C----CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 87776666654311000 000 0 01258999999999875 999998 58999999
Q ss_pred CCCCCCCCCC
Q 015948 292 RYFSSAPLPT 301 (397)
Q Consensus 292 p~~~~~~~~~ 301 (397)
|||.+..+..
T Consensus 294 p~f~~~~~~~ 303 (360)
T cd05627 294 PFFEGVDWGH 303 (360)
T ss_pred CCCCCCCHHH
Confidence 9999876643
No 91
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1e-48 Score=368.43 Aligned_cols=252 Identities=27% Similarity=0.418 Sum_probs=208.7
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHh-cCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
+.||+|+||+||+|++..+++.||||+++..... .........|..++.. ++||||+++++++..++.+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999999864322 2223344567777765 489999999999999999999999998
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
|+|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus 81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt 159 (316)
T cd05592 81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGT 159 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCC
Confidence 5676666654 459999999999999999999999999999999999999999999999999998754444445566789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+.+..+....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-------------------------- 212 (316)
T cd05592 160 PDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR-------------------------- 212 (316)
T ss_pred ccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence 99999999976 568999999999999999999999999887766665543210
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCH-HHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-~e~l~hp~~~~~~~ 299 (397)
..+...++.++.+||.+||..||.+|+++ .++++||||....+
T Consensus 213 --~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05592 213 --PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW 256 (316)
T ss_pred --CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence 01112358899999999999999999986 58889999987654
No 92
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-51 Score=359.95 Aligned_cols=264 Identities=25% Similarity=0.367 Sum_probs=229.5
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
...++|..+++||+|.||+|-+|+.+.+++.||||++++...-. .....-+.|-.+|+..+||++..|-..|+..+++|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 35788999999999999999999999999999999998765321 12223456889999999999999999999999999
Q ss_pred EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+||||+.| .|...+.. ...+++..++.|...|+.||.|||+++||+||||.+|+|++.+|++||+|||+++.--....
T Consensus 245 FVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~ 323 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD 323 (516)
T ss_pred EEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccc
Confidence 99999995 56555544 34499999999999999999999999999999999999999999999999999997666667
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
...+.||||.|+|||++.. ..|+.++|+|.+||++|||++|+.||...+.....+.|+..-.
T Consensus 324 t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~----------------- 385 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL----------------- 385 (516)
T ss_pred eeccccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc-----------------
Confidence 7888999999999999976 6799999999999999999999999998888777777655311
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTE 302 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~ 302 (397)
.++..+|++++.|+..+|.+||.+|.. +.|+.+|+||.+..|...
T Consensus 386 -----------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~ 435 (516)
T KOG0690|consen 386 -----------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEAT 435 (516)
T ss_pred -----------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHH
Confidence 233467999999999999999999984 789999999999988654
No 93
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.7e-48 Score=363.22 Aligned_cols=286 Identities=49% Similarity=0.850 Sum_probs=240.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||+|++|+||+|.+..+|+.||+|.+............+.+|+++++.++|+||+++++++..+.+.|+|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 67999999999999999999999999999999987654444444567789999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCCCCCccc
Q 015948 92 FMETDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|++++|...+..... .+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.+||+|||++...........
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (294)
T PLN00009 82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161 (294)
T ss_pred cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence 999999888865433 3688999999999999999999999999999999999985 56799999999987654444445
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||++.+...++.++|||||||++|+|++|.+||...+..+.+.+++..++.+....|.+...++++....
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T PLN00009 162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF 241 (294)
T ss_pred cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence 56678889999998775678899999999999999999999999988888888888888877777776655555542111
Q ss_pred c-ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 250 Y-VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 250 ~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
. ..........+.+++++.++|.+||+.||++||++.++++||||.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 1 11122233456779999999999999999999999999999999864
No 94
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7.3e-49 Score=365.45 Aligned_cols=284 Identities=45% Similarity=0.841 Sum_probs=239.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHL 88 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~l 88 (397)
.++|++.+.||.|+||.||+|.+..+++.+|+|.++...........+.+|+.++++++||||+++++++... ..+|+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 4679999999999999999999999999999999986654444444567899999999999999999998777 89999
Q ss_pred EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||||++++|...+......+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 163 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY 163 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc
Confidence 99999999998887766679999999999999999999999999999999999999999999999999998876654444
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+.+++..++.+....|+....++.....
T Consensus 164 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (293)
T cd07843 164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK 243 (293)
T ss_pred ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccc
Confidence 55667888999999877566789999999999999999999999999999999999888887777666654443332211
Q ss_pred cc--ccCCCccccCCC--CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QY--VAAPPLRSLFPS--ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~--~~~~~~~~~~~~--~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.. .....+...++. +++.+.+||.+||+.||++|||+.|++.|+||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 244 TFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 11 111122333444 48999999999999999999999999999998
No 95
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.3e-48 Score=369.89 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=206.1
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||.||+|++..+++.||+|++.+..... .....+.+|+.+++.+ +||||++++++|.+.+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47999999999999999999999999998654322 2233466899999998 699999999999999999999999984
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus 81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (329)
T cd05588 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGT 159 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCC
Confidence 777666544 469999999999999999999999999999999999999999999999999997543333344556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--------HHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--------IDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
+.|+|||++.+ ..++.++|+|||||++|+|++|+.||..... .+.+.+.... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~--------------- 220 (329)
T cd05588 160 PNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE---K--------------- 220 (329)
T ss_pred ccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---C---------------
Confidence 99999999976 5689999999999999999999999963211 1111111110 0
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPL 299 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~ 299 (397)
...+...++.++.+||.+||..||.+|++ ++++++||||....+
T Consensus 221 ---------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 221 ---------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 00122346899999999999999999987 789999999987654
No 96
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.3e-48 Score=367.72 Aligned_cols=252 Identities=26% Similarity=0.399 Sum_probs=208.8
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHh-cCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
+.||+|+||.||+|+++.+|+.||+|++...... .........|..++.. ++||||++++++|.+++++|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4799999999999999999999999999764321 2223345678888875 489999999999999999999999998
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
|+|...+... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+|+
T Consensus 81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05620 81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGT 159 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCC
Confidence 5777777654 458999999999999999999999999999999999999999999999999987543333344556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+....+.... +
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~----~--------------------- 213 (316)
T cd05620 160 PDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT----P--------------------- 213 (316)
T ss_pred cCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----C---------------------
Confidence 99999999976 568999999999999999999999998877665555443210 0
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCH-HHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-~e~l~hp~~~~~~~ 299 (397)
.+...++.++++||.+||..||++|+++ +++++||||....+
T Consensus 214 ---~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~ 256 (316)
T cd05620 214 ---HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINW 256 (316)
T ss_pred ---CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCH
Confidence 1112358899999999999999999997 58889999987543
No 97
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3e-49 Score=373.59 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=210.3
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g- 95 (397)
+.||+|+||+||+|++..+|+.||+|++...... ......+.+|+.+++.++||||++++++|...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999999999999999999764322 22234566899999999999999999999999999999999985
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||+++............+|+
T Consensus 81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (325)
T cd05594 81 ELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 159 (325)
T ss_pred cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCC
Confidence 66655554 4468999999999999999999997 799999999999999999999999999998654333344456789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+...-
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~-------------------------- 212 (325)
T cd05594 160 PEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-------------------------- 212 (325)
T ss_pred cccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC--------------------------
Confidence 99999999976 568999999999999999999999998877655554443210
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
..+...+++++.+||.+||+.||++|+ ++.++++||||.+..+
T Consensus 213 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 260 (325)
T cd05594 213 --IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW 260 (325)
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence 011234589999999999999999997 8999999999987544
No 98
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-51 Score=374.77 Aligned_cols=258 Identities=29% Similarity=0.457 Sum_probs=219.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
...|..++.||+|+||.||+|.+..+++.||+|++....... ....+.+|+.+|.+++++||.++|+.|-.+..++++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 456888899999999999999999999999999998765443 3446778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|||.| ++++++.. +..+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.+..+........
T Consensus 91 ey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~ 169 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK 169 (467)
T ss_pred HHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence 99995 55555554 44469999999999999999999999999999999999999999999999999998877777778
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
+.+||++|||||++.+ ..|+.++||||||++.|||++|.||+........+..| ..
T Consensus 170 tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI----pk------------------- 225 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI----PK------------------- 225 (467)
T ss_pred cccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec----cC-------------------
Confidence 8999999999999985 78999999999999999999999998765542111111 00
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
..|| .+-...|+.+++||..||.+||+.||+|.++|+|+|++...
T Consensus 226 --~~PP--~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 226 --SAPP--RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred --CCCC--ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 0111 11125589999999999999999999999999999997643
No 99
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-50 Score=368.74 Aligned_cols=269 Identities=26% Similarity=0.378 Sum_probs=225.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
..+.|..-++||+|+||.||-++.+.||+.||+|++.+...+ ..-...+++|..||.+++.++||.+-.+|++.+.+|+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 356788999999999999999999999999999998765432 3334467899999999999999999999999999999
Q ss_pred EEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 89 VFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
|+..|+ |||...|.+.+ ..|++..++.|+.+|+.||++||+.+||+|||||+|||+|+.|+++|+|+|+|..+....
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~- 341 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK- 341 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCC-
Confidence 999998 57877776654 459999999999999999999999999999999999999999999999999999885543
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
.....+||..|||||++.+.. |+.+.|+|||||++|||+.|+.||........-+.+-....+..
T Consensus 342 ~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~-------------- 406 (591)
T KOG0986|consen 342 PIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP-------------- 406 (591)
T ss_pred ccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch--------------
Confidence 344459999999999998754 99999999999999999999999988765544433322211111
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTEPN 304 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~~~ 304 (397)
..+....|+++++|...+|++||.+|.. ++++.+||||++.+|.....
T Consensus 407 ----------~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rlea 459 (591)
T KOG0986|consen 407 ----------EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEA 459 (591)
T ss_pred ----------hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhc
Confidence 1222355999999999999999999984 67999999999998876433
No 100
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.3e-49 Score=372.53 Aligned_cols=262 Identities=26% Similarity=0.405 Sum_probs=211.0
Q ss_pred ceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCc--cCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQ--KEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNL 86 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~ 86 (397)
+|++.+.||+|+||+||+|++. .+++.||+|++.+... .......+.+|+.+++.++ |+||++++++|..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999864 4789999999975432 1222345668999999994 89999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+||||+. |+|...+.... .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 99999998 57877776543 58999999999999999999999999999999999999999999999999998654332
Q ss_pred -CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 166 -~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
......+||+.|+|||++.+...++.++|||||||++|||++|..||...........+........
T Consensus 160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~------------ 227 (332)
T cd05614 160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD------------ 227 (332)
T ss_pred CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC------------
Confidence 2233467899999999998755688999999999999999999999975432221122211111000
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
..+...+++.+.+||.+||..||++|+ +++++++||||....+
T Consensus 228 ------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 228 ------------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred ------------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 012234589999999999999999999 8899999999987544
No 101
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2e-48 Score=368.86 Aligned_cols=265 Identities=25% Similarity=0.333 Sum_probs=217.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|++.+.||+|+||+||++++..+++.||+|++.+... .......+.+|+.+++.++|+||++++++|.+++++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999975322 2223344678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~ 168 (397)
||+. |+|..++.+....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+..... ..
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS 160 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence 9997 588888876666799999999999999999999999999999999999999999999999999977644332 22
Q ss_pred cccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
...+||+.|+|||++.+ ...++.++|||||||++|+|++|+.||.+.+..+....+.......
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~------------- 227 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF------------- 227 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc-------------
Confidence 33568999999999863 2457889999999999999999999998877766666654321100
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL 299 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~ 299 (397)
.+....+.+++++++||.+||..++.+ |++++++++||||.+..+
T Consensus 228 ----------~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~ 274 (331)
T cd05597 228 ----------QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDW 274 (331)
T ss_pred ----------cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence 011112346899999999998764443 789999999999987654
No 102
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.4e-48 Score=361.29 Aligned_cols=256 Identities=25% Similarity=0.345 Sum_probs=209.3
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL 97 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L 97 (397)
||+|+||+||+|.+..+++.||+|++....... .....+..|+.+++.++|+||++++++|..+..+|+||||++ |+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999999999999999987643322 122356689999999999999999999999999999999998 567
Q ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 98 ETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 98 ~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
...+.. .+..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++..............|+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~ 160 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT 160 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence 666543 34468999999999999999999999999999999999999999999999999998765544444456788
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|+|||||++|+|++|+.||...........+........
T Consensus 161 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------------- 217 (280)
T cd05608 161 PGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS---------------------- 217 (280)
T ss_pred cCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC----------------------
Confidence 89999999976 5688999999999999999999999987654322222222111000
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLP 300 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~ 300 (397)
..+.+.++.++.+|+.+||+.||++|+ +++++++||||++..+.
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~ 266 (280)
T cd05608 218 --VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR 266 (280)
T ss_pred --CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence 012234689999999999999999999 88999999999886554
No 103
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.2e-49 Score=388.10 Aligned_cols=276 Identities=24% Similarity=0.386 Sum_probs=215.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC------CCeeEEEeeeecC-
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS------PHIIELIDAFPHK- 83 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~l~~~~~~~- 83 (397)
.++|.+.+.||+|+||+||+|++..+++.||||+++... ........|+.+++.+.| .++++++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 578999999999999999999999999999999986432 122234568888887755 4589999988764
Q ss_pred CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCC--------------
Q 015948 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHG-------------- 148 (397)
Q Consensus 84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~-------------- 148 (397)
+++|+|||+++++|++++.+. ..+++..++.++.||+.||+|||+ .||+||||||+|||++.++
T Consensus 205 ~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 205 GHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred ceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence 589999999999999988765 359999999999999999999998 5999999999999998765
Q ss_pred --cEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 015948 149 --QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA 226 (397)
Q Consensus 149 --~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~ 226 (397)
.+||+|||.+.... ......+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.++.+.+..+..
T Consensus 284 ~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~ 359 (467)
T PTZ00284 284 PCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK 359 (467)
T ss_pred CceEEECCCCccccCc---cccccccCCccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 49999999886432 23345678999999999987 5699999999999999999999999999998888888887
Q ss_pred HhCCCCCCCCCCCCCCcc---cccc--------------ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948 227 AFGTATPSQWPDLAYLPD---YVEY--------------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~---~~~~--------------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 289 (397)
.++..+. .|........ .... .......+... ..++.+.|||.+||.+||.+|||++|+|
T Consensus 360 ~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 360 TLGRLPS-EWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV--IRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HcCCCCH-HHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh--hchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 7765432 2211100000 0000 00000000000 1256788999999999999999999999
Q ss_pred cCCCCCCC
Q 015948 290 EHRYFSSA 297 (397)
Q Consensus 290 ~hp~~~~~ 297 (397)
+||||...
T Consensus 437 ~Hp~~~~~ 444 (467)
T PTZ00284 437 THPYVLKY 444 (467)
T ss_pred cCcccccc
Confidence 99999763
No 104
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-50 Score=400.17 Aligned_cols=266 Identities=25% Similarity=0.360 Sum_probs=231.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
.++|.|+++||+|+||.|.+++++.+++.||+|++.+-... .....-|..|-++|..-+.+=|++++.+|+++.++|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 68899999999999999999999999999999999873322 22233466789999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC-CCCCc
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG-SPDRR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~-~~~~~ 167 (397)
|||++ |||+.++-+.. .+++..+++|+..|+.||+-||+.|+|||||||+||||+..|++||+|||.+-.+. ++...
T Consensus 154 MdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~ 232 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR 232 (1317)
T ss_pred EecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE
Confidence 99998 68999998877 79999999999999999999999999999999999999999999999999998876 44556
Q ss_pred ccccccCceeeChhcccC---c-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 168 FTHQVFARWYRAPELLFG---A-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~---~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
....+|||.|.|||+|.. . ..|+..+|||||||++|||+.|..||...+-.+.+.+|+..-.... +|
T Consensus 233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~---FP------ 303 (1317)
T KOG0612|consen 233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS---FP------ 303 (1317)
T ss_pred eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC---CC------
Confidence 678899999999999842 2 4699999999999999999999999999999999999987511100 01
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPLPTE 302 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~~~~ 302 (397)
+ -..+|.++++||++++. +|+.|.+ ++++..||||.+..|...
T Consensus 304 ~---------------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~i 349 (1317)
T KOG0612|consen 304 D---------------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNI 349 (1317)
T ss_pred c---------------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhh
Confidence 0 01369999999999886 8999998 999999999999999543
No 105
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.5e-48 Score=363.54 Aligned_cols=285 Identities=45% Similarity=0.788 Sum_probs=239.5
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------- 82 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 82 (397)
..++|.+.+.||+|+||.||+|.+..+++.||+|++............+.+|+++++.++|+||+++++.+..
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 3689999999999999999999999999999999997665444444567789999999999999999988743
Q ss_pred -CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 83 -KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 83 -~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
...+|+|+||+.+++...+......+++..++.++.||++||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 3457999999999999888876667999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCC-----------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 015948 162 GSPDR-----------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT 230 (397)
Q Consensus 162 ~~~~~-----------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 230 (397)
..... ..+...+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+.......+....+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT 245 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 43221 1233456788999999877666899999999999999999999999999999999999988888
Q ss_pred CCCCCCCCCCCCcccccc--ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 231 ATPSQWPDLAYLPDYVEY--QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
..+..|++...++..... .....+.+...+..++.++.+||.+||..||++|||+.|++.||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 877777776655543321 1112222334455677899999999999999999999999999998
No 106
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.4e-48 Score=368.70 Aligned_cols=253 Identities=26% Similarity=0.441 Sum_probs=211.3
Q ss_pred eeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 17 REVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++.||+|+||.||+|++. .+++.||+|++...... ......+.+|+.+|+.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 368999999999999864 47889999999764321 1223345689999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|+.| +|...+.. ...+.+..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...........
T Consensus 81 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (323)
T cd05584 81 YLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT 159 (323)
T ss_pred CCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccc
Confidence 9985 67666655 445889999999999999999999999999999999999999999999999999865444444445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..|++.|+|||++.+ ..++.++|||||||++|||++|++||.+.+....+..+....
T Consensus 160 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~---------------------- 216 (323)
T cd05584 160 FCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK---------------------- 216 (323)
T ss_pred cCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC----------------------
Confidence 678999999999976 568899999999999999999999999887766666554321
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
..+.+.+++++.+||.+||..||++|+ +++++++||||....+
T Consensus 217 ------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 217 ------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred ------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 012234588999999999999999999 8999999999987543
No 107
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-47 Score=357.18 Aligned_cols=283 Identities=44% Similarity=0.763 Sum_probs=228.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||.||+|.+..+|..||+|.+..... ......+.+|+.+++.++|+||+++++++..++..|+||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4689999999999999999999999999999999865432 233345678999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||+.++++..+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++...........
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 162 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS 162 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence 99999999888776666889999999999999999999999999999999999999999999999999865444433445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..++..|+|||++.+...++.++|||||||++|+|++|.+||.+.++ .+.+..+...++.+....++.....+.+....
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07870 163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242 (291)
T ss_pred ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence 56788899999987655688899999999999999999999987654 46666666666665555554443333322211
Q ss_pred cc--cCCCccccCCC--CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 250 YV--AAPPLRSLFPS--ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 250 ~~--~~~~~~~~~~~--~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.. ........+.. .+.++.+++.+||..||++|||+.|++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 11 11111121211 26789999999999999999999999999998
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.7e-49 Score=370.11 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=213.6
Q ss_pred eeeeeecCcEEEEEEEE---CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 17 REVLGEGTYGVVYKAID---TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
++.||+|+||.||++++ ..+|+.||+|++............+.+|+.+|++++||||++++++|.+++.+|+||||+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 36799999999999986 357899999999865443333445678999999999999999999999999999999999
Q ss_pred c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948 94 E-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (397)
Q Consensus 94 ~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 172 (397)
+ |+|...+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............
T Consensus 81 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 159 (318)
T cd05582 81 RGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 159 (318)
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence 8 5777777553 4589999999999999999999999999999999999999999999999999987655444445567
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (397)
|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 160 g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~----------------------- 215 (318)
T cd05582 160 GTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL----------------------- 215 (318)
T ss_pred CChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 8999999999976 5688999999999999999999999998877666665543210
Q ss_pred CCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948 253 APPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL 299 (397)
Q Consensus 253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~ 299 (397)
.+...+++++.+||.+||+.||++||+ .++++.||||....+
T Consensus 216 -----~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 216 -----GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 112345899999999999999999999 778999999987644
No 109
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.5e-48 Score=373.38 Aligned_cols=264 Identities=25% Similarity=0.343 Sum_probs=216.7
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
-.++|++.+.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+++++|+
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 35899999999999999999999999999999999875332 22223346689999999999999999999999999999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~- 166 (397)
|||||+ |+|..++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 121 v~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~ 198 (371)
T cd05622 121 VMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 198 (371)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence 999998 5777777654 389999999999999999999999999999999999999999999999999987643322
Q ss_pred cccccccCceeeChhcccCcc---CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 167 RFTHQVFARWYRAPELLFGAK---QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
.....+||+.|+|||++.+.. .++.++|||||||++|||++|.+||.+.+.......+....... .++
T Consensus 199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~~------ 269 (371)
T cd05622 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL---TFP------ 269 (371)
T ss_pred cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc---cCC------
Confidence 234567899999999986532 37899999999999999999999999887776666665421110 011
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPL 299 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~ 299 (397)
....++..+++||.+||..++.+ |++++++++|+||.+..+
T Consensus 270 ---------------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~ 312 (371)
T cd05622 270 ---------------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 312 (371)
T ss_pred ---------------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence 11346899999999999844433 789999999999987544
No 110
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-48 Score=369.56 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=209.2
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHH-HHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~-~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||+||+|++..+|+.||||++.+.... ......+..|.. +++.++||||+++++.|...+.+|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4799999999999999999999999999764322 122233445554 56789999999999999999999999999985
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.. +..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.............+|+
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (323)
T cd05575 81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGT 159 (323)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCC
Confidence 67666655 4468999999999999999999999999999999999999999999999999997654444444556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-------------------------- 212 (323)
T cd05575 160 PEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP-------------------------- 212 (323)
T ss_pred hhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence 99999999976 568999999999999999999999999877666655554320
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~ 299 (397)
..+.+.++..+.+||.+||+.||.+|+++ .++++||||....+
T Consensus 213 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 213 --LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 01223458999999999999999999987 69999999987654
No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.4e-48 Score=359.67 Aligned_cols=263 Identities=25% Similarity=0.380 Sum_probs=217.0
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.|++.+.||+|+||+||++.+..+++.||+|++....... .....+.+|+.+++.++|+||+++++.+..+.++|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4899999999999999999999999999999987643322 223346789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|+. |+|...+... ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 159 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TIR 159 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-ccc
Confidence 998 5777776553 3458999999999999999999999999999999999999999999999999998754322 223
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
..+|+..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+...+....
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------- 221 (285)
T cd05605 160 GRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ----------------- 221 (285)
T ss_pred cccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc-----------------
Confidence 4578889999999976 5688999999999999999999999988765544444433221111
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~ 301 (397)
......++..+.+||.+||..||++|| +++++++||||....+..
T Consensus 222 -------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~ 271 (285)
T cd05605 222 -------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKR 271 (285)
T ss_pred -------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHH
Confidence 011234588999999999999999999 899999999998765543
No 112
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.2e-48 Score=371.85 Aligned_cols=257 Identities=27% Similarity=0.419 Sum_probs=207.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||+||+|++..+++.||||++..... ......+.+|+.+++.++|+||++++++|..++.+|+||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 5779999999999999999999999999999999865432 223346778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||+.| +|.. .....+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+........
T Consensus 152 e~~~~~~L~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 226 (353)
T PLN00034 152 EFMDGGSLEG-----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN 226 (353)
T ss_pred ecCCCCcccc-----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence 99996 4432 22367888899999999999999999999999999999999999999999999987654443445
Q ss_pred ccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
..+|+..|+|||++.. ...++.++|||||||++|||++|+.||......+....+........
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------- 293 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP------------- 293 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-------------
Confidence 5678999999999743 23356789999999999999999999975433222221111100000
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
......++.++++||.+||..||++|||+.|+++||||...
T Consensus 294 -----------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 294 -----------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred -----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 11123458899999999999999999999999999999864
No 113
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.3e-48 Score=357.75 Aligned_cols=281 Identities=45% Similarity=0.842 Sum_probs=234.6
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||.|++|+||+|++..+|..||||++...... .....+.+|+.+++.++|+||+++++++.+.+..|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 589999999999999999999999999999999765432 2334567899999999999999999999999999999999
Q ss_pred cccCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 93 METDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 93 ~~g~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
++|+|..++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++............
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 9999998887644 45899999999999999999999999999999999999999999999999999876544444445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-cc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQ 249 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~ 249 (397)
..++..|++||++.+...++.++|+|||||++|+|++|.+||.+.+..+....++.....+....|......+.... +.
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 66788899999987766688999999999999999999999999988888888888777666655554443322211 01
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.........+.+.++..++++|.+||+.||.+||++.++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111112233445678999999999999999999999999999998
No 114
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.4e-48 Score=366.08 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=205.2
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||+||+|++..+++.||+|++.+..... .....+.+|+.++.++ +||||++++++|...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999998654322 2233466788888876 799999999999999999999999994
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (329)
T cd05618 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT 159 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCC
Confidence 67666654 3459999999999999999999999999999999999999999999999999997644334344556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--------cHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--------DIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
..|+|||++.+ ..++.++|||||||++|+|++|..||.... ....+.+.... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~---~--------------- 220 (329)
T cd05618 160 PNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---K--------------- 220 (329)
T ss_pred ccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc---C---------------
Confidence 99999999976 568999999999999999999999995311 11111111110 0
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPL 299 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~ 299 (397)
...++..++..+.+||.+||+.||++|++ ++++++||||.+..+
T Consensus 221 ---------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~ 270 (329)
T cd05618 221 ---------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 270 (329)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 01122356899999999999999999998 589999999987655
No 115
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=6.2e-48 Score=364.24 Aligned_cols=257 Identities=25% Similarity=0.365 Sum_probs=214.6
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~ 90 (397)
+|.+.+.||+|+||+||+|+++.+|+.||+|++.+... .......+..|+.++..+.| ++|++++++|.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 47889999999999999999999999999999976432 22223346678899988865 77888999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++ |+|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus 81 Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 81 EYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 9998 5777776554 4599999999999999999999999999999999999999999999999999986543333344
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.....
T Consensus 160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-------------------- 218 (323)
T cd05615 160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-------------------- 218 (323)
T ss_pred CccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------------
Confidence 5668999999999976 5689999999999999999999999998877666666554210
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL 299 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~ 299 (397)
.+...++.++.+|+.+||+.||.+|++ .+++++||||....+
T Consensus 219 --------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 219 --------SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred --------CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence 111245889999999999999999997 578999999997654
No 116
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.6e-48 Score=357.51 Aligned_cols=281 Identities=53% Similarity=0.934 Sum_probs=236.6
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
|++.+.||.|++|.||+|.+..+|..||+|++............+.+|+.+++.++|+||+++++++.+++..|++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 67899999999999999999999999999999866544444456778999999999999999999999999999999999
Q ss_pred ccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948 94 ETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (397)
Q Consensus 94 ~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 172 (397)
+++|..++.... ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++..............
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 160 (283)
T cd07835 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEV 160 (283)
T ss_pred CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccc
Confidence 989988887654 3589999999999999999999999999999999999999999999999999987654444444556
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc-cccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYV 251 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 251 (397)
++..|+|||++.+...++.++|+|||||++|+|++|.+||.+.++...+..++..++.+....|+.....++... +...
T Consensus 161 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd07835 161 VTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKW 240 (283)
T ss_pred cccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccc
Confidence 678899999987755678999999999999999999999999988888888888877766665554444333221 1111
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.........+.++..+.++|.+||+.||++|||++|+++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 2223344566788999999999999999999999999999998
No 117
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1e-47 Score=361.51 Aligned_cols=253 Identities=26% Similarity=0.421 Sum_probs=209.7
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHh-cCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
+.||+|+||+||+|++..+++.||||++..... ..........|..+++. ++||||+++++++.+.+.+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 479999999999999999999999999976532 12223345668888876 489999999999999999999999998
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
|+|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............||
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGT 159 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCC
Confidence 5787777654 458999999999999999999999999999999999999999999999999998654333344556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+.... +
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~----~--------------------- 213 (316)
T cd05619 160 PDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN----P--------------------- 213 (316)
T ss_pred ccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----C---------------------
Confidence 99999999976 568999999999999999999999998877665555443210 0
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCHH-HHhcCCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQ-QALEHRYFSSAPLP 300 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~-e~l~hp~~~~~~~~ 300 (397)
.+...++.++++||.+||+.||++|+++. ++++||||....+.
T Consensus 214 ---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05619 214 ---CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWS 257 (316)
T ss_pred ---CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHH
Confidence 01123478999999999999999999996 89999999886553
No 118
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7e-48 Score=365.31 Aligned_cols=266 Identities=23% Similarity=0.329 Sum_probs=218.6
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||+||+++++.+++.||+|++.+... .......+.+|+.++..++|+||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 579999999999999999999999999999999865322 2222334667999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~ 168 (397)
||+. |+|.+++.+....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence 9998 688888887666799999999999999999999999999999999999999999999999999976543222 22
Q ss_pred cccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
...+||+.|+|||++.+ ...++.++|||||||++|||++|+.||.+.+..+.+..+....... .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---~--------- 228 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF---Q--------- 228 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc---c---------
Confidence 34578999999999863 3458899999999999999999999999888777776664321100 0
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~~ 300 (397)
+......++.++++||.+||..++.+ |++++++++||||.+..+.
T Consensus 229 -----------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~ 275 (332)
T cd05623 229 -----------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWD 275 (332)
T ss_pred -----------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHH
Confidence 01112346899999999999765554 6899999999999886653
No 119
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.1e-47 Score=361.58 Aligned_cols=274 Identities=39% Similarity=0.714 Sum_probs=214.4
Q ss_pred eeeeeecCcEEEEEEEECC--CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCeEEEEEEc
Q 015948 17 REVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLHLVFEF 92 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~~lv~e~ 92 (397)
..+||+|+||+||+|++.. ++..||+|.+.... ....+.+|+.+|+.++||||+++++++. .+..+|+||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 3689999999999998653 66889999886432 2335678999999999999999999884 45688999999
Q ss_pred cccCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE----ccCCcEEEeeecccee
Q 015948 93 METDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARI 160 (397)
Q Consensus 93 ~~g~L~~~~~~~--------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl----~~~~~~kl~DFG~a~~ 160 (397)
++++|...+... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 999998887532 2248899999999999999999999999999999999999 4567899999999987
Q ss_pred eCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---------HHHHHHHHHHh
Q 015948 161 FGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------IDQLGKIFAAF 228 (397)
Q Consensus 161 ~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~ 228 (397)
...... ......+|..|+|||++.+...++.++|||||||++|||++|.+||....+ ...+..++..+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 654322 233456788999999997766789999999999999999999999976442 35567777777
Q ss_pred CCCCCCCCCCCCCCcccccccc------ccCC----CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 229 GTATPSQWPDLAYLPDYVEYQY------VAAP----PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
+......|.+....+.+..... .... .........+..+.+||.+||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 7776666665443332211110 0000 0111122346789999999999999999999999999998
No 120
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.4e-47 Score=359.24 Aligned_cols=285 Identities=42% Similarity=0.731 Sum_probs=228.7
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----- 84 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 84 (397)
..++|.+.+.||+|+||.||+|.+..+++.||||.+............+.+|+.++++++||||+++++++...+
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 356799999999999999999999999999999998765444444445678999999999999999999875543
Q ss_pred ---eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 85 ---NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 85 ---~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
..|+||||++++|...+...+..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++...
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 56999999999999998877667999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCC----cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 162 GSPDR----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 162 ~~~~~----~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
..... ......++..|+|||++.+...++.++|+|||||++|+|++|.+||.+.+....+..+....+...+..++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence 43321 22344567789999998775667899999999999999999999999888877777777776666665555
Q ss_pred CCCCCccccccccccCCC--c-ccc-CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 238 DLAYLPDYVEYQYVAAPP--L-RSL-FPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~--~-~~~-~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
+................. . ..+ ....+..+.+||.+||..||.+|||++|+++||||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 543222111111100000 0 000 11236788999999999999999999999999998
No 121
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9e-48 Score=364.41 Aligned_cols=282 Identities=26% Similarity=0.422 Sum_probs=215.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||.||+|++..++..||+|.+..... ......+.+|+++|+.++||||+++++++..++.+|+||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 5789999999999999999999999999999999875422 223446789999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||++| +|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++...... ..
T Consensus 83 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 159 (331)
T cd06649 83 EHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 159 (331)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--cc
Confidence 99985 777777654 3589999999999999999999986 6999999999999999999999999999865332 23
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC-CCCCCc----
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP-DLAYLP---- 243 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~---- 243 (397)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...+..+.. .++...........+ ......
T Consensus 160 ~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 160 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE-AIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred ccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHhcccccccccCCccccCccccccc
Confidence 34568889999999976 56899999999999999999999999766544332 222110000000000 000000
Q ss_pred ------------cc--cc-ccc-ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 244 ------------DY--VE-YQY-VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 244 ------------~~--~~-~~~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
.. .. ..+ .............++++++||.+||.+||++|||+.++++||||....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 00 00 000 000000111124688999999999999999999999999999998644
No 122
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.9e-48 Score=366.17 Aligned_cols=266 Identities=23% Similarity=0.322 Sum_probs=217.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||+||++++..+++.||+|++.+... .......+.+|+.++..++|+||++++++|.+.+.+|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 579999999999999999999999999999999875322 1222334667999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~ 168 (397)
||+. |+|..++.+....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 160 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS 160 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence 9998 588888877666799999999999999999999999999999999999999999999999999987654332 22
Q ss_pred cccccCceeeChhcccCc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 169 THQVFARWYRAPELLFGA----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
...+|++.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~------------- 227 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF------------- 227 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc-------------
Confidence 335689999999998642 357889999999999999999999999887766666654321100
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCC--CCCHHHHhcCCCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~~~~~ 300 (397)
++......++.++++||.+||..++++ |++++++++|+||....+.
T Consensus 228 ----------~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~ 275 (331)
T cd05624 228 ----------QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWE 275 (331)
T ss_pred ----------cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence 011122345899999999999876654 4689999999999876543
No 123
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-48 Score=363.01 Aligned_cols=252 Identities=25% Similarity=0.357 Sum_probs=212.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcE-EEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-eEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NLHL 88 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~-~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-~~~l 88 (397)
.+...+.+.||+|+||+||+|... |.. ||+|++............+.+|+.+|.+++|||||++++++.+.. .+++
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i 117 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI 117 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence 445566777999999999999765 555 999999876544444667889999999999999999999998877 7999
Q ss_pred EEEccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhHhCC-ccccCCCCCcEEEccCC-cEEEeeeccceeeCCC
Q 015948 89 VFEFME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP 164 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~-ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~ 164 (397)
||||++ |+|..++.. .+..++...+..++.+|+.|+.|||+++ ||||||||+||||+.++ ++||||||+++.....
T Consensus 118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 999999 678888877 3677999999999999999999999999 99999999999999998 9999999999987654
Q ss_pred CCcccccccCceeeChhcccC-ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 165 DRRFTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 165 ~~~~~~~~~t~~y~aPE~l~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
....+...||..|||||++.+ ...|+.++||||||+++|||+||..||.+.........+......+
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp------------ 265 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRP------------ 265 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC------------
Confidence 344555789999999999985 3679999999999999999999999999998866665554332111
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.+....++.+..|+.+||..||.+||+..+++.
T Consensus 266 --------------~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 266 --------------PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred --------------CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 111125789999999999999999999999875
No 124
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.3e-48 Score=363.64 Aligned_cols=254 Identities=25% Similarity=0.366 Sum_probs=207.1
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||+||+|++..+++.||+|++.+.... ......+.+|+.++.++ .||||++++++|...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999999865432 22233466899999888 689999999999999999999999984
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (327)
T cd05617 81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGT 159 (327)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCC
Confidence 676666544 459999999999999999999999999999999999999999999999999998644334444567789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS------DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
+.|+|||++.+ ..++.++|||||||++|+|++|..||.... ..+.+.+.... . +
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---~-~--------------- 219 (327)
T cd05617 160 PNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE---K-P--------------- 219 (327)
T ss_pred cccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh---C-C---------------
Confidence 99999999976 568999999999999999999999996432 11222222111 0 0
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPLP 300 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~~ 300 (397)
..+...++..+.++|.+||..||++|++ .+++++||||....+.
T Consensus 220 --------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~ 269 (327)
T cd05617 220 --------IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD 269 (327)
T ss_pred --------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence 0122345889999999999999999998 5799999999987654
No 125
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.2e-48 Score=365.17 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=206.9
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHH-HHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREI-KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~-~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||+||+|++..+++.||+|++.+... .......+.+|+ .+++.++||||++++++|.+.+.+|+|||||+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999999999999999999975432 112223344555 467889999999999999999999999999985
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.. ...+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||+++............+|+
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05603 81 GELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGT 159 (321)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCC
Confidence 67666654 4458999999999999999999999999999999999999999999999999988644444444556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.......+... +
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-----~--------------------- 212 (321)
T cd05603 160 PEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK-----P--------------------- 212 (321)
T ss_pred cccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC-----C---------------------
Confidence 99999999876 56899999999999999999999999887765555554321 0
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~ 299 (397)
..+.+..+.++.++|.+||+.||.+|+++ .++++|+||....+
T Consensus 213 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~ 259 (321)
T cd05603 213 --LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW 259 (321)
T ss_pred --CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence 01123457899999999999999999875 59999999987554
No 126
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.8e-48 Score=366.92 Aligned_cols=252 Identities=24% Similarity=0.375 Sum_probs=208.5
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHH-HHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREI-KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~-~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||+||+|++..+++.||+|++...... ......+..|. .+++.++||||++++++|...+.+|+||||+.|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4799999999999999999999999999754321 11222344444 457889999999999999999999999999995
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||
T Consensus 81 ~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 159 (325)
T cd05602 81 GELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGT 159 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCC
Confidence 67666655 4458899999999999999999999999999999999999999999999999998654444444566789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-------------------------- 212 (325)
T cd05602 160 PEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP-------------------------- 212 (325)
T ss_pred ccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--------------------------
Confidence 99999999976 568999999999999999999999999887766666554320
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCHH----HHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQ----QALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~----e~l~hp~~~~~~~ 299 (397)
....+.++..+.+||.+||+.||.+|+++. ++++|+||....+
T Consensus 213 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~ 259 (325)
T cd05602 213 --LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW 259 (325)
T ss_pred --cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence 012245689999999999999999999875 8999999987654
No 127
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-48 Score=369.13 Aligned_cols=275 Identities=24% Similarity=0.350 Sum_probs=213.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
..+|.+.+.||+|+||.||+|++..++..||+|+.... ....|+.+++.++|+||+++++++......|+||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 45799999999999999999999999999999974321 2346999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||+.|+|..++......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... ......
T Consensus 137 e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~-~~~~~~ 215 (357)
T PHA03209 137 PHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV-APAFLG 215 (357)
T ss_pred EccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc-Cccccc
Confidence 9999999999988777899999999999999999999999999999999999999999999999999975432 222334
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCc---------HHHHHHHHHHhCCCCCCCCCCC-
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSD---------IDQLGKIFAAFGTATPSQWPDL- 239 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~---------~~~~~~i~~~~~~~~~~~~~~~- 239 (397)
..||..|+|||++.+ ..++.++|||||||++|||+++ .++|..... ...+..++..++.... .++..
T Consensus 216 ~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ 293 (357)
T PHA03209 216 LAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE-EFPRDP 293 (357)
T ss_pred ccccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh-hcCCCC
Confidence 568899999999976 5689999999999999999974 556554321 2333444444443322 22211
Q ss_pred --CCCccccccccccCCCccc----cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 240 --AYLPDYVEYQYVAAPPLRS----LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 240 --~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.....+..+......+... ....++.++.+||.+||+.||++|||+.|+|+||||++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0000111111001011100 11245788999999999999999999999999999975
No 128
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.4e-47 Score=356.58 Aligned_cols=287 Identities=43% Similarity=0.774 Sum_probs=239.6
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC---
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--- 84 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--- 84 (397)
....++|++.+.||+|+||+||+|.++.+|+.||+|.+............+.+|+.+++.++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 45678999999999999999999999999999999999765544444456678999999999999999999886654
Q ss_pred -------eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948 85 -------NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (397)
Q Consensus 85 -------~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~ 157 (397)
.+|+|+||+++++...+......+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||+
T Consensus 83 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 8999999999999888887666799999999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCC-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 158 ARIFGSPDR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 158 a~~~~~~~~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
+........ ......++..|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+....+...+..|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 987644332 2233445677999999876556789999999999999999999999999889999999888888888777
Q ss_pred CCCCCCcccccccc--ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 237 PDLAYLPDYVEYQY--VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 237 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
++....+....... .........+..++..+.+||.+||..||.+||++.+++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 76654443221111 11112333445678999999999999999999999999999997
No 129
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=8.4e-48 Score=356.77 Aligned_cols=283 Identities=37% Similarity=0.683 Sum_probs=228.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||+|+||.||+|.+..+++.||+|.+............+.+|+++++.++||||+++++++..++..|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 57999999999999999999999999999999987654443344567789999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
|++++++..+......+++..++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY 160 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence 99987666665555568999999999999999999999999999999999999999999999999998765544444556
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc---cccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD---YVEY 248 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~ 248 (397)
.++..|+|||++.+...++.++|||||||++|+|++|.++|.+.+..+....+...++.............+. ....
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07846 161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP 240 (286)
T ss_pred cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence 7888999999987656678899999999999999999999998888777777776655432211000000000 0000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
............+.++..+.+|+.+||..||++||++.++++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0001112233456789999999999999999999999999999998
No 130
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.5e-48 Score=365.49 Aligned_cols=288 Identities=38% Similarity=0.671 Sum_probs=234.0
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----C
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G 84 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~ 84 (397)
+.++|.+.+.||+|+||+||+|++..++..||||.+............+.+|+.+++.++|+||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 56789999999999999999999999999999999876433333344567899999999999999999987544 3
Q ss_pred eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
.+|+|+||++++|...+... ..+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred cEEEEEeCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 58999999999998888754 45999999999999999999999999999999999999999999999999999876544
Q ss_pred CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC--
Q 015948 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL-- 242 (397)
Q Consensus 165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-- 242 (397)
........++..|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+...++...+..+......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 333445567888999999876556899999999999999999999999988877777777777776655444211110
Q ss_pred cccc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 243 PDYV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
..+. .......+......+.+++++.+||.+||+.||++|||++++++||||....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 0000 0011112233445567899999999999999999999999999999997653
No 131
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.5e-48 Score=364.96 Aligned_cols=252 Identities=25% Similarity=0.374 Sum_probs=208.2
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHH-HHHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~-~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||+||+|++..+|+.||+|++.+.... ......+..|.. +++.++||||++++++|..++.+|+||||+.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999999999999999999754321 222234455554 57789999999999999999999999999985
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|...+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++............+|+
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (325)
T cd05604 81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGT 159 (325)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCC
Confidence 66666654 4569999999999999999999999999999999999999999999999999997654334444556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~-------------------------- 212 (325)
T cd05604 160 PEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP-------------------------- 212 (325)
T ss_pred hhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence 99999999976 568899999999999999999999999877666655554310
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~ 299 (397)
....+.++..+.++|.+||..||.+||++ .++++||||....+
T Consensus 213 --~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 213 --LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW 259 (325)
T ss_pred --ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence 01123468899999999999999999976 58999999987544
No 132
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.5e-48 Score=369.59 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=206.9
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhc---CCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL---KSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
||+|+||+||+|++..+|+.||||++.+.... .........|..++..+ .||||+++++.|.+...+|+||||+.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999998754321 12222345677777765 69999999999999999999999998
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
|+|...+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............+||
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt 159 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT 159 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence 477766665 4459999999999999999999999999999999999999999999999999997654444444556789
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
..|+|||++.+...++.++|||||||++|+|++|..||.+.+..+.+..+..... .++
T Consensus 160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----~~~----------------- 217 (330)
T cd05586 160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV-----RFP----------------- 217 (330)
T ss_pred ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC-----CCC-----------------
Confidence 9999999997756689999999999999999999999988776655555432100 000
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCC----CHHHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARI----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~----t~~e~l~hp~~~~~~~ 299 (397)
...+++++.+||.+||..||.+|| +++++++||||....+
T Consensus 218 -----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~ 261 (330)
T cd05586 218 -----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDW 261 (330)
T ss_pred -----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCH
Confidence 013488999999999999999998 7999999999987543
No 133
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.9e-47 Score=352.56 Aligned_cols=283 Identities=42% Similarity=0.736 Sum_probs=231.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+++++.++|+||+++++.+..++..|+|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 47999999999999999999999999999999987655545555678899999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTH 170 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~~ 170 (397)
|++++++..+......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........ ....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD 160 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence 999888877766666699999999999999999999999999999999999999999999999999987654433 3445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++.+|+|||++.+...++.++|+|||||++|+|++|.+||.+.+..+.+..+...++...+..+..............
T Consensus 161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07833 161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF 240 (288)
T ss_pred cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence 66788899999998754789999999999999999999999998888887777777666555433322221111111000
Q ss_pred cc---CCCccccCC-CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 VA---APPLRSLFP-SASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~~---~~~~~~~~~-~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.. .......++ .++.++++||.+||..+|++||+++++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00 000111222 348999999999999999999999999999998
No 134
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-47 Score=370.60 Aligned_cols=283 Identities=26% Similarity=0.359 Sum_probs=220.5
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 84 (397)
...+..+|.+.+.||+|+||.||+|... .++..||+|.+.... ...+|+.+|+.++||||++++++|....
T Consensus 87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKS 159 (392)
T ss_pred chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCC
Confidence 3445678999999999999999999754 356789999875431 3457999999999999999999999999
Q ss_pred eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
.+|+|||++.++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 160 ~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 160 TVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9999999999999998843 456999999999999999999999999999999999999999999999999999876433
Q ss_pred CC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHHHhCCCCCCCCCCC
Q 015948 165 DR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKIFAAFGTATPSQWPDL 239 (397)
Q Consensus 165 ~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~ 239 (397)
.. ......||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.. ....+..+...++..... ++..
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~-~~~~ 316 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE-FPQN 316 (392)
T ss_pred cccccccccccccCccCHhHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc-cCCc
Confidence 22 2234578999999999976 568999999999999999999998887653 356666677666543322 1111
Q ss_pred CCC---ccccccccccCCCc--ccc--CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 240 AYL---PDYVEYQYVAAPPL--RSL--FPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 240 ~~~---~~~~~~~~~~~~~~--~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
... .....+.....++. ... ....+.++.+||.+||..||++|||+.|+|.||||...++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 000 00001111111110 011 1235778999999999999999999999999999986543
No 135
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-47 Score=372.85 Aligned_cols=275 Identities=23% Similarity=0.303 Sum_probs=213.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
..+|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|++++|+|||++++++..++..|+||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 558999999999999999999999999999999632 123568999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RF 168 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~ 168 (397)
|++.++|..++......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++....... ..
T Consensus 240 e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 319 (461)
T PHA03211 240 PKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319 (461)
T ss_pred EccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence 9999999999887666799999999999999999999999999999999999999999999999999987643221 12
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC-CCCCCC------cHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGSS------DIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~-pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
....||..|+|||++.+ ..++.++|||||||+||||++|.. +|.... ....+.+++...+.... .++....
T Consensus 320 ~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~ 397 (461)
T PHA03211 320 YGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD-EFPQHAG 397 (461)
T ss_pred cccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc-cCCCCcc
Confidence 23568999999999977 568999999999999999998764 454332 13445555544332211 1111000
Q ss_pred ---Cccccc------cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 242 ---LPDYVE------YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 242 ---~~~~~~------~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
...+.. ......+.+ ..+..++.++.+||.+||+.||.+|||+.|+|+||||++
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAW-TRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcch-hhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000000 000000111 112246789999999999999999999999999999974
No 136
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-49 Score=375.02 Aligned_cols=261 Identities=26% Similarity=0.430 Sum_probs=222.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+.|.|+..||.|+||.||+|.++.++-..|.|+|.. ..+.....++-||.||..+.||+||+|+++|..++.++|+.
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 5678899999999999999999998888888998853 23334456778999999999999999999999999999999
Q ss_pred EccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|||+|+ ....+..-+..|.+.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+......-....
T Consensus 109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRD 188 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRD 188 (1187)
T ss_pred eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhc
Confidence 999965 5556666677799999999999999999999999999999999999999999999999999877655555667
Q ss_pred ccccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 170 HQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
..+|||+|||||++. ...+|++++||||||++|.||.-+.||...-+.-.++-+|.+. .
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---e-------------- 251 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---E-------------- 251 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---C--------------
Confidence 899999999999973 3467999999999999999999999998877776666665442 1
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
|+.---+...|..+.||+.+||.+||..||+++++|+||||++.+
T Consensus 252 --------PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 252 --------PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred --------CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 111111233478999999999999999999999999999998654
No 137
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.8e-47 Score=352.46 Aligned_cols=281 Identities=59% Similarity=0.980 Sum_probs=239.0
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
|.+.+.||.|++|.||+|.+..+|+.+++|.+............+.+|+.+++.++|+||+++++++.++..+|+|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 67889999999999999999999999999998765544444556778999999999999999999999999999999999
Q ss_pred ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948 94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (397)
Q Consensus 94 ~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 173 (397)
++++.+.+......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+..............+
T Consensus 81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 160 (283)
T cd05118 81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV 160 (283)
T ss_pred CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccC
Confidence 99999998887677999999999999999999999999999999999999999999999999999887655434445667
Q ss_pred CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc--c
Q 015948 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY--V 251 (397)
Q Consensus 174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 251 (397)
+..|+|||.+.+...++.++|+|||||++|+|++|+++|.+.+..+.+..+...++...+..|+............+ .
T Consensus 161 ~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd05118 161 TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK 240 (283)
T ss_pred cccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccc
Confidence 88899999997755789999999999999999999999999999998888888877776666655443222222111 1
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.........+.++.++.+||.+||..||.+||++.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 1222334455678999999999999999999999999999997
No 138
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.7e-47 Score=357.51 Aligned_cols=282 Identities=41% Similarity=0.770 Sum_probs=225.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECC--CCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLH 87 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~ 87 (397)
+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ........+.+|+.+++.++||||+++++++.+. ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58999999999999999999988 88999999998644 2233344567899999999999999999999888 8899
Q ss_pred EEEEccccCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc----CCcEEEeeeccce
Q 015948 88 LVFEFMETDLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLAR 159 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~----~~~~kl~DFG~a~ 159 (397)
+||||+++++...+... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 99999999888877543 236899999999999999999999999999999999999999 8999999999998
Q ss_pred eeCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH---------HHHHHHHHH
Q 015948 160 IFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI---------DQLGKIFAA 227 (397)
Q Consensus 160 ~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------~~~~~i~~~ 227 (397)
....... ......++..|+|||++.+...++.++|||||||++|+|++|.+||.+.... ..+..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 7644332 2233466888999999877667899999999999999999999999876542 356667777
Q ss_pred hCCCCCCCCCCCCCCcccccccccc----C--CCccc---cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 228 FGTATPSQWPDLAYLPDYVEYQYVA----A--PPLRS---LFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~---~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
++...+..|.+...++++....... . ..... .....+.++.++|.+||+.||++|||+.|+++||||
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 7766666555444443332210000 0 00000 011567899999999999999999999999999998
No 139
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.9e-47 Score=361.44 Aligned_cols=290 Identities=38% Similarity=0.670 Sum_probs=233.5
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee----cCCe
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP----HKGN 85 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~----~~~~ 85 (397)
+.++|.+.+.||.|+||.||+|.+..+|..||+|++............+.+|+.+|+.++||||++++++|. ....
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 568999999999999999999999999999999998765433334456678999999999999999999875 3457
Q ss_pred EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
+|+||||++|+|...+... ..+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++.......
T Consensus 83 ~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 83 VYVVMDLMESDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEEEEehhhhhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 8999999999988887654 449999999999999999999999999999999999999999999999999998764332
Q ss_pred C----cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 166 R----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 166 ~----~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
. .....+++.+|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+...++.+.+..+.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 1 123456788899999987656689999999999999999999999999888888888777777655443322110
Q ss_pred C--cccc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 242 L--PDYV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 242 ~--~~~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
- .... .+......++....+..+.++.+||.+||+.||.+||++++++.||||.....+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 0 0000 011111222334456779999999999999999999999999999999865443
No 140
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.8e-47 Score=360.91 Aligned_cols=287 Identities=39% Similarity=0.680 Sum_probs=226.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----C
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G 84 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~ 84 (397)
+.++|.+.+.||+|+||.||+|++..+|+.||+|++..... ......+.+|+.+++.++|+||+++++++... .
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 56899999999999999999999999999999999864322 22334567899999999999999999876543 4
Q ss_pred eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 85 ~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
.+|+|+||+++++...+... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred eEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 68999999999998887653 4899999999999999999999999999999999999999999999999999876433
Q ss_pred CC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 165 DR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 165 ~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
.. .....+++..|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+...++...+..+.....
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 22 123356788899999987656789999999999999999999999998877777777777666544433221110
Q ss_pred Ccc--cc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 242 LPD--YV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 242 ~~~--~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
... +. ........++....+.++.++.+||.+||+.||++|||+.|+++||||.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 000 00 00001111222334567899999999999999999999999999999986543
No 141
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-49 Score=364.94 Aligned_cols=260 Identities=29% Similarity=0.425 Sum_probs=226.6
Q ss_pred hhcceee--eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 10 VADRYLK--REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 10 ~~~~y~i--~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
+..-|+| .++||+|.||+||-|+++++|+.||||+|.+..........+++|+.||..+.||.||.+-..|+..+.++
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervF 639 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVF 639 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEE
Confidence 3445555 68999999999999999999999999999998877777778889999999999999999999999999999
Q ss_pred EEEEccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceeeCC
Q 015948 88 LVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGS 163 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~~~ 163 (397)
+|||.+.||.+..|... .+.+++...+.++.||+.||+|||.+||+|+||||+|||+.+. -++||||||+|++++.
T Consensus 640 VVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE 719 (888)
T KOG4236|consen 640 VVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE 719 (888)
T ss_pred EEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence 99999999999998765 5679999999999999999999999999999999999999765 3699999999999865
Q ss_pred CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
. ......+||+.|+|||++.. +.|+.+-|+||+|||+|.-+.|..||.... +.-.+|.+.--..++..|
T Consensus 720 k-sFRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW------- 788 (888)
T KOG4236|consen 720 K-SFRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPW------- 788 (888)
T ss_pred h-hhhhhhcCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCch-------
Confidence 3 34567889999999999987 789999999999999999999998886544 344455444333334444
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
..+|+++.|||..+|+..-++|.+.++.|.|||+++-
T Consensus 789 -----------------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 789 -----------------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred -----------------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 3569999999999999999999999999999999864
No 142
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2e-50 Score=352.15 Aligned_cols=263 Identities=27% Similarity=0.422 Sum_probs=226.6
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
+.-.+-|.++++||+|+||.||+|.|+.+|..+|||.+... ...+.+.+|+.|+.++..|++|++|+.|-....++
T Consensus 29 K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLW 104 (502)
T KOG0574|consen 29 KPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLW 104 (502)
T ss_pred CChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceE
Confidence 33467789999999999999999999999999999998643 33456889999999999999999999988888999
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
||||||+ |+..+.++.++.+++++++..+++..+.||+|||...-+|||||..|||++.+|..||+|||.|-.+.+.-.
T Consensus 105 IVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred eehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence 9999999 899999999999999999999999999999999999999999999999999999999999999988877667
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
...+.+||+.|||||++.. ..|+..+||||||++..||..|+||+.+-.. +..|+....
T Consensus 185 KRNTVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---MRAIFMIPT----------------- 243 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHP---MRAIFMIPT----------------- 243 (502)
T ss_pred hhCccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCcccccc---cceeEeccC-----------------
Confidence 7778999999999999975 7799999999999999999999999875432 122221111
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
..|+.-..+...|.++.|||++||.++|++|.|+.++++|||.++.+..
T Consensus 244 -----~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 244 -----KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred -----CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 1112222223458999999999999999999999999999999887543
No 143
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-46 Score=384.67 Aligned_cols=267 Identities=26% Similarity=0.400 Sum_probs=218.7
Q ss_pred ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--
Q 015948 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-- 82 (397)
Q Consensus 5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-- 82 (397)
+....+.++|++++.||+|+||+||+|++..++..||+|++............+.+|+.+|+.|+|||||+++++|.+
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 446667889999999999999999999999999999999998665444445567889999999999999999998844
Q ss_pred CCeEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhC-------CccccCCCCCcEEEccC----
Q 015948 83 KGNLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKK-------WVLHRDMKPNNLLIGSH---- 147 (397)
Q Consensus 83 ~~~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~-------~ivHrDlkp~NILl~~~---- 147 (397)
...+|||||||. |+|..++... ...+++..++.|+.||+.||.|||+. +|+||||||+||||+.+
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 467999999998 5888887653 34699999999999999999999984 49999999999999642
Q ss_pred -------------CcEEEeeeccceeeCCCCCcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCC
Q 015948 148 -------------GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQ 213 (397)
Q Consensus 148 -------------~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~ 213 (397)
+.+||+|||++..+... ......+||+.|+|||++.+. ..++.++||||||||||+|++|..||.
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~-s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIE-SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccccCCCCceEEccCCcccccccc-ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 34899999999876432 233456789999999998642 458899999999999999999999998
Q ss_pred CCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948 214 GSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293 (397)
Q Consensus 214 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 293 (397)
..+....+...+... .. ......+.++.+||..||..+|.+||++.|+|.|+|
T Consensus 245 ~~~~~~qli~~lk~~---p~------------------------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 245 KANNFSQLISELKRG---PD------------------------LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred cCCcHHHHHHHHhcC---CC------------------------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 776655444333211 00 001234789999999999999999999999999999
Q ss_pred CCCCCC
Q 015948 294 FSSAPL 299 (397)
Q Consensus 294 ~~~~~~ 299 (397)
+.....
T Consensus 298 ik~i~~ 303 (1021)
T PTZ00266 298 IKNVGP 303 (1021)
T ss_pred HhhcCC
Confidence 986544
No 144
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.5e-48 Score=351.40 Aligned_cols=259 Identities=34% Similarity=0.539 Sum_probs=215.1
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
|++.+.||+|+||+||+|++..+++.||+|++..............+|+.++++++|+||+++++++.+....|+||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999877654444444456999999999999999999999999999999999
Q ss_pred cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948 94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (397)
Q Consensus 94 ~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 172 (397)
.+ +|..++.. ...+++..+..++.||+.||.+||++||+|+||||+||+++.++.++|+|||.+..............
T Consensus 81 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 159 (260)
T PF00069_consen 81 PGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV 159 (260)
T ss_dssp TTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred ccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 96 88888873 34589999999999999999999999999999999999999999999999999987544445566677
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (397)
++..|+|||++.....++.++|+||||+++|+|++|..||......+....+...........+.
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 224 (260)
T PF00069_consen 160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ--------------- 224 (260)
T ss_dssp SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT---------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc---------------
Confidence 88899999998734678999999999999999999999999874444443333221110000000
Q ss_pred CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.....+..+.++|.+||+.||++||++.++++||||
T Consensus 225 ------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 225 ------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp ------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 000113789999999999999999999999999997
No 145
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.7e-47 Score=376.39 Aligned_cols=261 Identities=25% Similarity=0.373 Sum_probs=218.4
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC---
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--- 84 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--- 84 (397)
....++|.+.+.||+|+||+||+|++..+|+.||||++............+.+|+.++..++|+||+++++.|....
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34578999999999999999999999999999999999776544444456778999999999999999988774332
Q ss_pred -----eEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeee
Q 015948 85 -----NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF 155 (397)
Q Consensus 85 -----~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DF 155 (397)
.+++||||+. |+|.+.+... ...+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 4789999998 6888887643 346899999999999999999999999999999999999999999999999
Q ss_pred ccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948 156 GLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233 (397)
Q Consensus 156 G~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 233 (397)
|+++.+.... ......+||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+.+..+.....
T Consensus 188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~---- 262 (496)
T PTZ00283 188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY---- 262 (496)
T ss_pred ccCeeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC----
Confidence 9998764321 22345678999999999976 5689999999999999999999999988776665555433210
Q ss_pred CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
..+.+.+++++.+||.+||..||.+||++.++++|||+..
T Consensus 263 -----------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 263 -----------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred -----------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 1123456899999999999999999999999999999764
No 146
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.2e-47 Score=359.64 Aligned_cols=287 Identities=42% Similarity=0.694 Sum_probs=238.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----eEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NLH 87 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----~~~ 87 (397)
+|.+.+.||.|+||.||+|++..+++.||||++............+.+|+.+++.++|+||+++++++.... .+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 699999999999999999999999999999998765433444456788999999999999999999987765 799
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-- 165 (397)
+||||++++|...+.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 81 lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 999999998888887644 69999999999999999999999999999999999999999999999999998875543
Q ss_pred -CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC--CCCC
Q 015948 166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD--LAYL 242 (397)
Q Consensus 166 -~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~ 242 (397)
.......++.+|+|||++.+...++.++|+|||||++|+|++|.+||.+.+..+.+..++..++...+..+.. ....
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 2344556788999999998754789999999999999999999999999999999999988887766554431 1111
Q ss_pred ccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 243 PDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
..+.. ........+....+.++.++.+||.+||+.||.+|||+++++.||||.+...+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 11111 11112223444566789999999999999999999999999999999875543
No 147
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=6.5e-47 Score=349.87 Aligned_cols=281 Identities=52% Similarity=0.904 Sum_probs=240.2
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
|++.+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++|+||+++++++.+.+.+|+||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 67889999999999999999999999999999876544445556778999999999999999999999999999999999
Q ss_pred ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948 94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (397)
Q Consensus 94 ~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 173 (397)
+++|.+++.+....+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||.+..............+
T Consensus 81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 160 (282)
T cd07829 81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV 160 (282)
T ss_pred CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcccc
Confidence 99999999877556999999999999999999999999999999999999999999999999999877655444555666
Q ss_pred CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc-cccccccc
Q 015948 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD-YVEYQYVA 252 (397)
Q Consensus 174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 252 (397)
+..|+|||.+.+...++.++|+|||||++|||++|.+||.+.+..+.+.++...++......|+....... ...+....
T Consensus 161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (282)
T cd07829 161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP 240 (282)
T ss_pred CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccC
Confidence 77899999987755789999999999999999999999999998888999988888777776665544431 11111122
Q ss_pred CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.......++.++..+.++|.+||..||++||++++++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 241 PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 223344556678999999999999999999999999999998
No 148
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-48 Score=341.57 Aligned_cols=265 Identities=27% Similarity=0.390 Sum_probs=217.0
Q ss_pred Chhhhcceee-eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948 7 SKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (397)
Q Consensus 7 ~~~~~~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~ 84 (397)
+..+.+-|.+ .+.||+|+|+.|-.|...++|..||||++.+. ......+.++|++++.+++ |+||++|+++|+++.
T Consensus 72 ~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 72 SGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred cchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 4456777877 56789999999999999999999999999865 3334557889999999994 999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEEEeeecccee
Q 015948 85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARI 160 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~kl~DFG~a~~ 160 (397)
.+|+|||.|. |.|+..|.++.. |++.++..++..|+.||+|||.+||.||||||+|||..... -+|||||.+..-
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred eEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 9999999998 589999987654 99999999999999999999999999999999999997654 489999988754
Q ss_pred eCC-------CCCcccccccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-----------
Q 015948 161 FGS-------PDRRFTHQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI----------- 218 (397)
Q Consensus 161 ~~~-------~~~~~~~~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----------- 218 (397)
... ......+.+|+..|||||+.. ....|+.+.|.||||||||-||.|.+||.|.-..
T Consensus 229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr 308 (463)
T KOG0607|consen 229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR 308 (463)
T ss_pred cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence 311 112355677888899999962 3456999999999999999999999999876321
Q ss_pred ----HHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 219 ----DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 219 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
...+.|.++--..+. .-|..+|.+++|||+.+|..|+.+|.++.++++|||+
T Consensus 309 ~CQ~~LFesIQEGkYeFPd------------------------kdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~ 364 (463)
T KOG0607|consen 309 VCQNKLFESIQEGKYEFPD------------------------KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV 364 (463)
T ss_pred HHHHHHHHHHhccCCcCCh------------------------hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence 222333332222222 2234579999999999999999999999999999999
Q ss_pred CCCC
Q 015948 295 SSAP 298 (397)
Q Consensus 295 ~~~~ 298 (397)
....
T Consensus 365 ~~~~ 368 (463)
T KOG0607|consen 365 QRCA 368 (463)
T ss_pred cccc
Confidence 8654
No 149
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-46 Score=360.27 Aligned_cols=284 Identities=36% Similarity=0.572 Sum_probs=224.2
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 83 (397)
.+.++|.+.+.||+|+||.||+|.+..+|+.||||.+............+.+|+.+++.++|+||++++++|...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 468999999999999999999999999999999999865443333344567899999999999999999988543
Q ss_pred -CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 84 -~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
..+|+||||+.++|...+... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 357999999999998887643 8899999999999999999999999999999999999999999999999998764
Q ss_pred CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...++.+....+......
T Consensus 170 ~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
T cd07850 170 TSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT 247 (353)
T ss_pred CCC-CCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence 432 2334567888999999976 56899999999999999999999999988888888888777665433211110000
Q ss_pred cc-cc-------c--ccc----ccCCC-ccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 243 PD-YV-------E--YQY----VAAPP-LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 243 ~~-~~-------~--~~~----~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
.. +. . +.. ...+. ........+..+++||.+||+.||++|||+.|+|.||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 00 00 0 000 00000 000012346779999999999999999999999999998743
No 150
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.1e-46 Score=348.04 Aligned_cols=257 Identities=26% Similarity=0.387 Sum_probs=205.3
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL 97 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L 97 (397)
||+|+||+||++++..+|+.||+|.+....... .....+..|+++++.++||||+++++.|.++.++|+||||+. |+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999999999999999987543222 122345579999999999999999999999999999999998 577
Q ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCce
Q 015948 98 ETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176 (397)
Q Consensus 98 ~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~ 176 (397)
...+... ...+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....... ......++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCCCC
Confidence 7776543 3358899999999999999999999999999999999999999999999999998764422 2334567888
Q ss_pred eeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCc
Q 015948 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256 (397)
Q Consensus 177 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (397)
|+|||++.+ ..++.++|+|||||++|+|++|..||.+.........+........ .
T Consensus 160 y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~ 215 (277)
T cd05607 160 YMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE-----------------------V 215 (277)
T ss_pred ccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc-----------------------c
Confidence 999999976 4589999999999999999999999976543222222222110000 0
Q ss_pred cccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCCCCCCCCC
Q 015948 257 RSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYFSSAPLPT 301 (397)
Q Consensus 257 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~~~~~~~~ 301 (397)
......++.++++||.+||+.||++||++ ++++.|+||....++.
T Consensus 216 ~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~ 264 (277)
T cd05607 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPR 264 (277)
T ss_pred ccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHH
Confidence 00112458899999999999999999999 6788999998766543
No 151
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-48 Score=349.74 Aligned_cols=283 Identities=30% Similarity=0.552 Sum_probs=228.6
Q ss_pred cChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CC----eeEEEee
Q 015948 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PH----IIELIDA 79 (397)
Q Consensus 6 ~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~----iv~l~~~ 79 (397)
.++.+.++|.++..||+|.||.|-.+++..++..||||+++.. ....+.++-|+++|.++.+ |+ +|++.++
T Consensus 83 ~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w 159 (415)
T KOG0671|consen 83 VGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDW 159 (415)
T ss_pred eccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence 3566799999999999999999999999999999999998643 3344566779999999943 32 7888999
Q ss_pred eecCCeEEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc------------
Q 015948 80 FPHKGNLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS------------ 146 (397)
Q Consensus 80 ~~~~~~~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~------------ 146 (397)
|...++.|||+|.++-++.+++.+.+ .+++...++.+++||+++++|||+.+++|.||||||||+.+
T Consensus 160 FdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 160 FDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred hhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence 99999999999999999999998854 46999999999999999999999999999999999999842
Q ss_pred --------CCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH
Q 015948 147 --------HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI 218 (397)
Q Consensus 147 --------~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 218 (397)
+..|+|+|||.|+...... ...+.|+.|+|||++++ -+++..+||||+||||+||.+|..+|+++++.
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 2248999999998753322 56788999999999998 67999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCC-----------------CCCCCCCccccccccccCCCccccCCCCCH---HHHHHHHHhcCcC
Q 015948 219 DQLGKIFAAFGTATPSQ-----------------WPDLAYLPDYVEYQYVAAPPLRSLFPSASD---DALDLLSKMFTYD 278 (397)
Q Consensus 219 ~~~~~i~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~li~~~L~~d 278 (397)
++++-|-..+| +.|.. |++...-.+ ..+......++..+...-+. .+.|||.+||.+|
T Consensus 316 EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~-~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 316 EHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGK-SKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred HHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCcccccccc-chhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 99976666666 33322 222221111 11222223334444433333 4779999999999
Q ss_pred CCCCCCHHHHhcCCCCCCC
Q 015948 279 PKARITAQQALEHRYFSSA 297 (397)
Q Consensus 279 P~~R~t~~e~l~hp~~~~~ 297 (397)
|.+|+|+.|+|.||||...
T Consensus 394 P~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 394 PARRITLREALSHPFFARL 412 (415)
T ss_pred ccccccHHHHhcCHHhhcC
Confidence 9999999999999999864
No 152
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1e-46 Score=357.34 Aligned_cols=281 Identities=26% Similarity=0.425 Sum_probs=213.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||.||+|.+..++..+|+|.+..... ......+.+|+++++.++|+||++++++|.+++.+|+||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 5789999999999999999999999999999999875432 223345779999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||+. |+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.+|.+||+|||++...... ..
T Consensus 83 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~ 159 (333)
T cd06650 83 EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 159 (333)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--cc
Confidence 9998 5787777654 4589999999999999999999985 7999999999999999999999999999765332 22
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC-------
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY------- 241 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------- 241 (397)
....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||......+.. .++.......+........
T Consensus 160 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T cd06650 160 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAESETSPRPRPPGRP 237 (333)
T ss_pred ccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCccccccCcccCCccch
Confidence 33467888999999976 56899999999999999999999999866543322 2211100000000000000
Q ss_pred ----Ccc---------ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 242 ----LPD---------YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 242 ----~~~---------~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
.++ ...+. .............+.++++||.+||++||++|||++|++.|+||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 238 LSSYGPDSRPPMAIFELLDYI-VNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred hhhhcccccccccHHHHHHHH-hcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 000 00000 000000001123578999999999999999999999999999997643
No 153
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.8e-46 Score=347.58 Aligned_cols=281 Identities=46% Similarity=0.834 Sum_probs=234.5
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEEEEE
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHLVFE 91 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~lv~e 91 (397)
|.+.+.||.|+||.||+|.+..+++.+|+|.+............+.+|+.+++.++|+|++++++++... +..|+|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 7889999999999999999999999999999987653444445677899999999999999999999888 89999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTH 170 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~~ 170 (397)
|++++|...+......+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++........ ....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN 160 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence 999999999887756799999999999999999999999999999999999999999999999999987654432 2334
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||.+.+...++.++|||||||++|+|++|.+||...+....+..+....+......|+....+........
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07840 161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240 (287)
T ss_pred cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence 45677899999887656688999999999999999999999999888888888888877777777766544321111111
Q ss_pred --ccCCCccccCCCC-CHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 --VAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 --~~~~~~~~~~~~~-s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.....+...+... +..+.++|.+||..||.+||++.++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 0111122233333 8999999999999999999999999999997
No 154
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.3e-46 Score=349.08 Aligned_cols=261 Identities=26% Similarity=0.382 Sum_probs=211.0
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.|++.+.||+|+||+||+|.+..+++.||+|.+........ ....+.+|+.+++.++|++|+++++.+.+++.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 47889999999999999999999999999999876543222 22346689999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|+. |+|...+... ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 159 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIK 159 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-ccc
Confidence 998 5777776543 3358999999999999999999999999999999999999999999999999997653322 223
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...|+..|+|||++.+ ..++.++|||||||++|+|++|.+||....................
T Consensus 160 ~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~----------------- 221 (285)
T cd05630 160 GRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ----------------- 221 (285)
T ss_pred CCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh-----------------
Confidence 4578889999999976 5689999999999999999999999987543221111111100000
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL 299 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~ 299 (397)
......+++++.+||.+||+.||++|+| ++|+++||||....+
T Consensus 222 -------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05630 222 -------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINF 269 (285)
T ss_pred -------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence 0112345789999999999999999999 999999999976433
No 155
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.7e-46 Score=347.12 Aligned_cols=277 Identities=40% Similarity=0.669 Sum_probs=220.9
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecC--CeEEEEE
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK--GNLHLVF 90 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~--~~~~lv~ 90 (397)
|.+.+.||+|+||.||+|.+..++..||+|.+....... ......+|+.+++++. |+||+++++++.++ +.+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 788999999999999999999999999999987543222 2234457999999985 99999999999887 8999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
||++|++++.+......+++..++.++.||+.||.|||++|++||||||+||+++. +.+||+|||+++...... ....
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-~~~~ 157 (282)
T cd07831 80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-PYTE 157 (282)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC-CcCC
Confidence 99999999998876667999999999999999999999999999999999999999 999999999998764332 2234
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc--
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-- 248 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-- 248 (397)
..++..|+|||++.+...++.++|||||||++|||++|.+||.+.+..+.+..+....+........... ......+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 236 (282)
T cd07831 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR-KSRHMNYNF 236 (282)
T ss_pred CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc-ccccccccC
Confidence 5678889999987665667899999999999999999999999988877777776655543321100000 0000000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.......+....+.++.++.+||.+||..||++||+++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0001111233345678999999999999999999999999999997
No 156
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.3e-46 Score=339.20 Aligned_cols=254 Identities=25% Similarity=0.418 Sum_probs=213.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv~e 91 (397)
+|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+.+++.++|+|++++++.+.. +..+|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5999999999999999999999999999999997654444444567789999999999999999998864 457899999
Q ss_pred ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|++ ++|.+.+... ...+++..++.++.+++.||.+||++|++||||||+||+++.++.++|+|||++...........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 998 5788777763 34589999999999999999999999999999999999999999999999999987755444445
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...+++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+.....
T Consensus 161 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-------------------- 219 (257)
T cd08223 161 TLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL-------------------- 219 (257)
T ss_pred cccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--------------------
Confidence 5667888999999876 5688899999999999999999999987665554444433210
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
......+++.+.+||.+||+.||.+|||+.++++||||
T Consensus 220 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 -------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred -------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 01112357899999999999999999999999999997
No 157
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-48 Score=338.08 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=213.5
Q ss_pred hhhcceee-eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec----
Q 015948 9 KVADRYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH---- 82 (397)
Q Consensus 9 ~~~~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~---- 82 (397)
.+.++|.+ .++||-|--|.|-.|.++.|++.||+|++.... .+++|+++.-.. .|||||.++|.|++
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-------KARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-------HHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 37888988 467899999999999999999999999986432 456899886655 69999999999854
Q ss_pred CCeEEEEEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeecc
Q 015948 83 KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGL 157 (397)
Q Consensus 83 ~~~~~lv~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~ 157 (397)
...+.+|||+++ |+|++.+..++ ..|+|.++..|++||..|+.|||+.+|.||||||+|+|.... ..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 457889999999 57888888764 459999999999999999999999999999999999999754 4699999999
Q ss_pred ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCCC
Q 015948 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI----DQLGKIFAAFGTATP 233 (397)
Q Consensus 158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~~~ 233 (397)
|+.... .....+.+.|++|.|||++.. ..|+.+.|+||+||++|-|++|.|||..+... ....+|..+--.++
T Consensus 211 AK~t~~-~~~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP- 287 (400)
T KOG0604|consen 211 AKETQE-PGDLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP- 287 (400)
T ss_pred ccccCC-CccccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC-
Confidence 997654 345667889999999999955 56999999999999999999999999876543 22333333211111
Q ss_pred CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
...|..+|.+++|+|+.+|..+|.+|+|+++++.|||..+..
T Consensus 288 -----------------------~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 288 -----------------------EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred -----------------------ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 234456799999999999999999999999999999998754
No 158
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-48 Score=350.04 Aligned_cols=311 Identities=26% Similarity=0.350 Sum_probs=256.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~l 88 (397)
..+|-.+.+||+|+||.|-+|..+.+.+.||||++++...- ....+--+.|-.+|.... -|++++++.+|+.-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 45688999999999999999999999999999999876522 222222346777777764 4899999999999999999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
||||+. |+|...+++-+ .+-|..+..|+.+|+-||-+||++||++||||.+|||++.+|++||+|||+++.--.....
T Consensus 428 VMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred EEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence 999998 57888877654 5899999999999999999999999999999999999999999999999999876666677
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
..+.+||+.|+|||++.- .+|+.++|+||+||+||||+.|++||++.++.+....|+..-.
T Consensus 507 TkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv------------------ 567 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV------------------ 567 (683)
T ss_pred eeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC------------------
Confidence 788999999999999975 7899999999999999999999999999999999988876421
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCCCCCCCCCCCCCCCCcccccc----CCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRYFSSAPLPTEPNKLPRPATKRA----SKAS 318 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~~~~~~~~~~~~~~~----~~~~ 318 (397)
.++.++|.++.++...+|.+.|.+|..+ .+|-+||||....|.........|+.++. ...+
T Consensus 568 ----------syPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~e 637 (683)
T KOG0696|consen 568 ----------SYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAE 637 (683)
T ss_pred ----------cCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccccCCchh
Confidence 2334679999999999999999999864 67999999999888654443333333332 2333
Q ss_pred CCC--CCCCCcccCCcccccCCCCCCCCCCCCCCc
Q 015948 319 DFN--PQEGPTVLSPPRKTRRVMPDREGFEGNANR 351 (397)
Q Consensus 319 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
++. -...++.+.|+.+--...-+++.|.|.+.-
T Consensus 638 NFD~~Ft~~~~~lTPpD~~v~~nldq~eF~gFsfv 672 (683)
T KOG0696|consen 638 NFDKFFTREPTDLTPPDKLVMMNLDQSEFEGFSFV 672 (683)
T ss_pred hhhHHHhcCCCCCCCchHHHHhcCchhhcCceeee
Confidence 333 246778888888877777788888887654
No 159
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.3e-46 Score=371.01 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=214.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC-CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+|+.++|||||+++++|..++++|+|
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 44599999999999999999998887 7889999764332 22233566799999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 90 FEFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|||+. |+|...+.. ....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+....
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 99998 588776643 24468999999999999999999999999999999999999999999999999998764432
Q ss_pred C--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 166 R--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 166 ~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~------------- 289 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD------------- 289 (478)
T ss_pred ccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------
Confidence 1 2345568999999999876 56899999999999999999999999887776666655432110
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.....++.++.+||.+||..||++||++++++.|+|+..
T Consensus 290 --------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 290 --------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred --------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 111245889999999999999999999999999999853
No 160
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.8e-46 Score=347.04 Aligned_cols=263 Identities=27% Similarity=0.395 Sum_probs=215.2
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
..+.|++.+.||.|+||.||+|++..+++.|++|.+.... ......+.+|+.+++.++|+||+++++.+..++.+|+|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 3678999999999999999999999999999999986432 22234567899999999999999999999999999999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|||++| +|...+.+....+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 167 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR 167 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc
Confidence 999995 5666666555669999999999999999999999999999999999999999999999999987654433333
Q ss_pred cccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
....++..|+|||++.+ ...++.++|+|||||++|+|++|.+||...+......++... ..+ .
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~-~--------- 234 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPP-T--------- 234 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CCc-c---------
Confidence 44567788999999853 234788999999999999999999999876654444333211 000 0
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
......++.++.+||.+||..||++||+++++++||||.....
T Consensus 235 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 235 ------------LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred ------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 0112245789999999999999999999999999999976543
No 161
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.9e-46 Score=345.83 Aligned_cols=262 Identities=26% Similarity=0.390 Sum_probs=216.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.|++.+.||+|+||+||+|.+..+++.||+|.+........ ....+.+|+.+|+.++|+||+.++++|..++..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 47889999999999999999999999999999876543222 22346689999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|+.| +|...+... ...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~ 159 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-ESIR 159 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-Cccc
Confidence 9984 677666543 345999999999999999999999999999999999999999999999999999765432 2234
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...|+..|+|||++.+ ..++.++|+|||||++|+|++|..||.+..+......+.........
T Consensus 160 ~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~---------------- 222 (285)
T cd05632 160 GRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE---------------- 222 (285)
T ss_pred CCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc----------------
Confidence 4578899999999976 56899999999999999999999999887665544444332211110
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLP 300 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~ 300 (397)
.+.+.++.++.+|+.+||+.||++||+ +.+++.|+||....+.
T Consensus 223 --------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 223 --------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred --------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence 112345789999999999999999999 8899999999886543
No 162
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.5e-46 Score=355.15 Aligned_cols=285 Identities=35% Similarity=0.656 Sum_probs=222.3
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------ 83 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~------ 83 (397)
+..+|.+.+.||.|+||.||+|.+..+|..||+|++..... .....+.+|+.+++.++||||+++++.+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 46899999999999999999999999999999999865433 2334577899999999999999999876543
Q ss_pred --------CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEee
Q 015948 84 --------GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLAD 154 (397)
Q Consensus 84 --------~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~D 154 (397)
..+|+||||++++|...+... .+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence 368999999999888877643 4899999999999999999999999999999999999974 56789999
Q ss_pred eccceeeCCCCC---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 155 FGLARIFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 155 FG~a~~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
||+++....... ......++..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+....+.......
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999987543221 11234567889999998765678899999999999999999999999888777766666543322
Q ss_pred CCCCCCCCCC-Cccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 232 TPSQWPDLAY-LPDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 232 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
.+..+..... ++.... .......+.....+.++.++++||.+||+.||.+|||+.+++.||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~ 307 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS 307 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence 2211111100 000000 011122233444567899999999999999999999999999999998643
No 163
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.7e-46 Score=337.15 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=216.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|.+.+.||+|++|.||+|.+..+++.|++|.+............+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 48899999999999999999999999999999876544444455677899999999999999999999999999999999
Q ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
+. ++|.+++... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++............
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 97 5888887764 456899999999999999999999999999999999999999999999999999877655444445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+.....
T Consensus 161 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------- 218 (256)
T cd08529 161 IVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF--------------------- 218 (256)
T ss_pred cccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---------------------
Confidence 567888999999976 5588999999999999999999999987775554444432110
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
..+...++.++.++|.+||+.+|++||++.++++|||+
T Consensus 219 ------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 219 ------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 01111347899999999999999999999999999995
No 164
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.3e-46 Score=339.46 Aligned_cols=255 Identities=25% Similarity=0.452 Sum_probs=211.3
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC---ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
+.|.+.+.||+|++|.||+|.+..+++.||+|.+........ ....+.+|+.++++++||||+++++++..+..+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 579999999999999999999999999999999876533221 22356789999999999999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|+||++| +|.+.+... ..+++..++.++.||+.||.|||++||+||||+|+||+++.++.++|+|||+++........
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 9999985 677777654 35899999999999999999999999999999999999999999999999999865432211
Q ss_pred c---cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 168 F---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 168 ~---~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
. ....++..|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--------------- 224 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT--------------- 224 (263)
T ss_pred cccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC---------------
Confidence 1 23456788999999987 4589999999999999999999999987665544433322100
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
...+...++..+.+||.+||..+|.+|||+.++++|+||
T Consensus 225 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 225 -----------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -----------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 011223458899999999999999999999999999997
No 165
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.9e-46 Score=356.26 Aligned_cols=291 Identities=40% Similarity=0.689 Sum_probs=231.5
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec--C
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH--K 83 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~--~ 83 (397)
+..+.++|.+.+.||+|+||.||+|.+..+|..+|+|++............+.+|+.+++++ +|+||++++++|.. .
T Consensus 2 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~ 81 (337)
T cd07852 2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81 (337)
T ss_pred CchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence 45678999999999999999999999999999999999865433333334567899999999 99999999999864 3
Q ss_pred CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
..+|+||||++++|...+... .+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++.....
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 82 KDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred ceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 468999999999998888765 588999999999999999999999999999999999999999999999999987643
Q ss_pred CC-----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948 164 PD-----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (397)
Q Consensus 164 ~~-----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 238 (397)
.. .......++.+|+|||++.+...++.++|+|||||++|+|++|++||.+....+...++....+......+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES 239 (337)
T ss_pred ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 32 1233456788999999987666788999999999999999999999999888888888777665433221111
Q ss_pred CCCC--cccc-ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 239 LAYL--PDYV-EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 239 ~~~~--~~~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
+... .... ..............+.++.++.+||.+||+.||++|||+.++++||||.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 0000 0000 00111112233445567899999999999999999999999999999987533
No 166
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.1e-46 Score=345.40 Aligned_cols=260 Identities=28% Similarity=0.414 Sum_probs=216.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||.|+||+||+|.+..++..+|+|.+.... ......+.+|+.+++.++|+||+++++.+..+..+|+||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 468999999999999999999998899999999986432 222345678999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++| +|..++.+....+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 99985 77777776666799999999999999999999999999999999999999999999999999876654444444
Q ss_pred ccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
...++..|+|||++.. ...++.++|+|||||++|+|++|.+||.+.+....+..+.... . +.
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~----~~------- 227 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE---P----PT------- 227 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC---C----CC-------
Confidence 5667888999999852 2346789999999999999999999998776655544442210 0 00
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
......++.++.+||.+||+.||.+||+++++++|+||.+.
T Consensus 228 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 228 -----------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred -----------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 01112357899999999999999999999999999999764
No 167
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.3e-46 Score=351.25 Aligned_cols=281 Identities=20% Similarity=0.214 Sum_probs=208.4
Q ss_pred eeeeeeec--CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 16 KREVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 16 i~~~LG~G--~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
++++||+| +|++||++.++.+|+.||+|.+............+.+|+.+++.++||||++++++|..++..|+||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 57889999 7899999999999999999998765444444445678999999999999999999999999999999999
Q ss_pred c-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-----
Q 015948 94 E-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----- 166 (397)
Q Consensus 94 ~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~----- 166 (397)
+ |+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||.+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 161 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV 161 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence 8 5777777653 33489999999999999999999999999999999999999999999999987544321111
Q ss_pred --cccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC-------CCCC
Q 015948 167 --RFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT-------PSQW 236 (397)
Q Consensus 167 --~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------~~~~ 236 (397)
......++..|+|||++.+. ..++.++|||||||++|||++|..||.................... +...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (327)
T cd08227 162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEEL 241 (327)
T ss_pred ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhc
Confidence 11223456679999998753 4589999999999999999999999987655443333222100000 0000
Q ss_pred -------CCCCCCcccccc----ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 237 -------PDLAYLPDYVEY----QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 237 -------~~~~~~~~~~~~----~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
............ ..............+++++.+||.+||+.||++|||++|+++||||..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 242 TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 000000000000 000001111223346789999999999999999999999999999975
No 168
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.2e-46 Score=355.54 Aligned_cols=287 Identities=37% Similarity=0.622 Sum_probs=230.5
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe---
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN--- 85 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~--- 85 (397)
.+.++|.+.+.||+|+||.||+|++..++..||+|++............+.+|+.+++.+.|+||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 46889999999999999999999999999999999986543333333456789999999999999999998866554
Q ss_pred ---EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 86 ---LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 86 ---~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
+|+|+||++++|.+++... .+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred cccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 9999999999998888753 48999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. .....++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+....+..+....+...+..+.....-
T Consensus 170 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07851 170 DE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSE 246 (343)
T ss_pred cc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccch
Confidence 32 334567888999999876556889999999999999999999999998888888888776654433222111100
Q ss_pred --ccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 243 --PDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 243 --~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
..+.. ......+.+...+..++.++.+||.+||..||++|||+.++++||||.....+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 00000 01111122334455679999999999999999999999999999999865443
No 169
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=6.3e-46 Score=353.34 Aligned_cols=283 Identities=37% Similarity=0.619 Sum_probs=226.1
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------ 83 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~------ 83 (397)
+.++|.+.+.||+|+||.||+|++..+|+.||+|++............+.+|+.+++.++|+||++++++|...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 46899999999999999999999999999999999876544344445677899999999999999999998654
Q ss_pred CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
..+|+|+||+.+++..... ..+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||+++....
T Consensus 93 ~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 93 QDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred ceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 3569999999987766542 3489999999999999999999999999999999999999999999999999876432
Q ss_pred CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
......++..|+|||++.+...++.++|||||||++|||++|+.||.+.+....+..+...++...+..+.......
T Consensus 170 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 170 ---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred ---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence 22345677889999998765568899999999999999999999999988778888887766644433221111000
Q ss_pred ccc---ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 244 DYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 244 ~~~---~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
... .........+...++.++.++.+||.+||+.||.+||++++++.||||....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 000 0001111223334567789999999999999999999999999999998753
No 170
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.4e-46 Score=353.28 Aligned_cols=252 Identities=25% Similarity=0.388 Sum_probs=198.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC-
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK- 83 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~- 83 (397)
.++|++.+.||+|+||.||+|.+. .++..||+|++..... ......+.+|+.+|+.+ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 478999999999999999999752 3457899999864322 22234578899999999 899999999988654
Q ss_pred CeEEEEEEccc-cCHHHHHHhcC---------------------------------------------------------
Q 015948 84 GNLHLVFEFME-TDLETVIRNTN--------------------------------------------------------- 105 (397)
Q Consensus 84 ~~~~lv~e~~~-g~L~~~~~~~~--------------------------------------------------------- 105 (397)
+.+|+||||++ |+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 46899999998 68888776431
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccCceeeC
Q 015948 106 ----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRA 179 (397)
Q Consensus 106 ----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~a 179 (397)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ......++..|+|
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 2377888999999999999999999999999999999999999999999999986532221 1223344567999
Q ss_pred hhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccc
Q 015948 180 PELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRS 258 (397)
Q Consensus 180 PE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (397)
||++.+ ..++.++|||||||++|||++ |.+||.+....+.+...+..... ..
T Consensus 245 PE~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--------------------------~~ 297 (338)
T cd05102 245 PESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR--------------------------MR 297 (338)
T ss_pred cHHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC--------------------------CC
Confidence 999976 568999999999999999997 99999876544333332221000 01
Q ss_pred cCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 259 LFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 259 ~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
....+++++.+||.+||..||.+|||+.++++
T Consensus 298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 298 APENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11245789999999999999999999999975
No 171
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.6e-45 Score=335.89 Aligned_cols=254 Identities=25% Similarity=0.482 Sum_probs=215.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||+|+||.||++++..+|+.||+|.+............+.+|+.+++.++|+||+++++++...++.|+||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 69999999999999999999999999999999876543333344678899999999999999999999999999999999
Q ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
+. ++|.+.+... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++............
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 98 5888887664 335889999999999999999999999999999999999999999999999999876554433344
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+.....
T Consensus 161 ~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~--------------------- 218 (256)
T cd08218 161 CIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY--------------------- 218 (256)
T ss_pred ccCCccccCHHHhCC-CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC---------------------
Confidence 567788999999876 5578899999999999999999999987766665555433210
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.......+.++.++|.+||+.+|.+||++.++++||||
T Consensus 219 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 219 ------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 01112347899999999999999999999999999997
No 172
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.1e-45 Score=342.06 Aligned_cols=259 Identities=27% Similarity=0.396 Sum_probs=213.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
+.|++.+.||.|+||.||+|.+..++..+++|.+..... .....+.+|+.+++.++|+||++++++|..++..|+|+|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 457899999999999999999999999999999854321 223456789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|++| +|...+.+....+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||++............
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 162 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence 9985 566666655567999999999999999999999999999999999999999999999999999766443333445
Q ss_pred cccCceeeChhccc----CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 171 QVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 171 ~~~t~~y~aPE~l~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
..++..|+|||++. ....++.++|+|||||++|+|++|.+||...+..+....+.......
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 227 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT--------------- 227 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC---------------
Confidence 56788899999984 22457789999999999999999999998776655555543321100
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
......++.++.+||.+||..||.+||+++++++||||...
T Consensus 228 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 228 ----------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 00112347899999999999999999999999999999753
No 173
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-47 Score=355.57 Aligned_cols=258 Identities=28% Similarity=0.433 Sum_probs=221.7
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
+.|.=++.||.|+||.||.|++..+...||||++..+. +....+..+++|+..|+++.|||+|.+-++|-.+...|+||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 45666889999999999999999999999999998765 44556677899999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|||-|+-.+++.-...++.+.++..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|...... ..
T Consensus 106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA----ns 181 (948)
T KOG0577|consen 106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA----NS 181 (948)
T ss_pred HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch----hc
Confidence 99999777777666667999999999999999999999999999999999999999999999999999876443 46
Q ss_pred cccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 171 QVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
++|||+|||||+++. ..+|+-++||||||+++.||.-.+||+...+.-..+..|...-.....
T Consensus 182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq--------------- 246 (948)
T KOG0577|consen 182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ--------------- 246 (948)
T ss_pred ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC---------------
Confidence 799999999999853 457999999999999999999999998777766666666543111100
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
-+..|+.++.||..||++-|.+|||.+++|.|+|......
T Consensus 247 -----------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 247 -----------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred -----------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence 1223889999999999999999999999999999865443
No 174
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.3e-45 Score=338.87 Aligned_cols=257 Identities=27% Similarity=0.391 Sum_probs=209.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 5689999999999999999999999999999999875432 12234668999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||+++ +|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 86 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 86 EFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred eccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 99985 777776554 4699999999999999999999999999999999999999999999999999987654443444
Q ss_pred ccccCceeeChhccc--CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 170 HQVFARWYRAPELLF--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~--~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
...++..|+|||++. ....++.++|+|||||++|+|++|.+||........+..+... ...+..+
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~----------- 231 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS--NFQPPKL----------- 231 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc--CCCCCcc-----------
Confidence 567888999999974 2245788999999999999999999988765543333222111 0000000
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 293 (397)
.....++..+.+||.+||..||++||+++++++|||
T Consensus 232 ----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 232 ----------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ----------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 001134788999999999999999999999999998
No 175
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-45 Score=351.31 Aligned_cols=285 Identities=39% Similarity=0.632 Sum_probs=224.6
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG----- 84 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 84 (397)
+.++|.+.+.||+|+||+||+|.+..++..||||++............+.+|+.+|+.++|+||++++++|....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 678999999999999999999999999999999998654333333445778999999999999999999987654
Q ss_pred -eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 85 -NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 85 -~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
.+|+||||++++|...+... .+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred ceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 46899999988888777643 489999999999999999999999999999999999999999999999999986533
Q ss_pred CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC-
Q 015948 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL- 242 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~- 242 (397)
. .....+++.|+|||++.+...++.++|+|||||++|+|++|.+||.+.+....+..++...+......+......
T Consensus 171 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 171 E---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred C---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 2 233456788999999876556889999999999999999999999988877777776664433221110000000
Q ss_pred -ccccc-cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 243 -PDYVE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 243 -~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
..+.. ........+....+.+++.+.++|.+||..||++|||+.+++.||||.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00000 0001111223344667899999999999999999999999999999987543
No 176
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.3e-45 Score=339.33 Aligned_cols=278 Identities=44% Similarity=0.803 Sum_probs=226.1
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEeeeecCCe-----
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFPHKGN----- 85 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~~~~~----- 85 (397)
|.+.+.||+|+||.||+|+++.+++.||+|.+............+.+|+.+++++ +|+||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7889999999999999999998899999999976544444444566788887766 59999999999987776
Q ss_pred EEEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 86 LHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
+|++|||+.++|.+++.... ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 99999999999988877643 35899999999999999999999999999999999999999999999999999876443
Q ss_pred CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
. ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+..+.+.++....+......|+.......
T Consensus 161 ~-~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 161 M-ALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred c-ccccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 2 2233456778999999976 5588999999999999999999999999999999998888766555444443322111
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
. .+............+.+++.+.+||.+||+.||.+||++.+++.||||
T Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 239 S-SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred h-hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0 011111122234445668899999999999999999999999999997
No 177
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.8e-45 Score=341.98 Aligned_cols=257 Identities=29% Similarity=0.514 Sum_probs=213.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
...+|++.+.||+|+||.||+|++..++..||+|.+...... ....+.+|+.+++.+.|+||+++++.|..+.+.|+|
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 467999999999999999999999999999999998754432 234577899999999999999999999999999999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|||+.| +|..++... .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 96 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 173 (296)
T cd06654 96 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (296)
T ss_pred ecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence 999984 777776543 48899999999999999999999999999999999999999999999999988664443334
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+....+..+... +. + .
T Consensus 174 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~--~-~------------- 235 (296)
T cd06654 174 STMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GT--P-E------------- 235 (296)
T ss_pred CcccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CC--C-C-------------
Confidence 45678888999999876 55789999999999999999999999877654433322110 00 0 0
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
......++..+.+||.+||..||++|||+.++++|+||..
T Consensus 236 --------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 236 --------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred --------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 0112345788999999999999999999999999999975
No 178
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-46 Score=350.66 Aligned_cols=247 Identities=25% Similarity=0.413 Sum_probs=211.0
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
+.+.+.+.||+|.||.||+|....+ ..||+|.++..... ...+.+|+++|++|+|++||++++++..++.+|||||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE 281 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE 281 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence 4466788999999999999977532 48999998765333 2357799999999999999999999999889999999
Q ss_pred ccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||. |+|+++++. .+..+...+...++.||++|++||+++++|||||-..||||++++.+||+|||+|+...+......
T Consensus 282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 999 899999997 456699999999999999999999999999999999999999999999999999996554433222
Q ss_pred ccc-cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 170 HQV-FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 170 ~~~-~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
... ...-|.|||.+.. ..++.++|||||||+||||+| |+.|+.+.++.+.+..+-++...+.|..
T Consensus 362 ~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~------------ 428 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEG------------ 428 (468)
T ss_pred CCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCC------------
Confidence 111 1234999999976 459999999999999999997 9999999999999999988766655543
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
+++++-+++..|+..+|++|||.+.+..
T Consensus 429 ---------------CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 429 ---------------CPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred ---------------CCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 4789999999999999999999987653
No 179
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2e-45 Score=340.01 Aligned_cols=256 Identities=27% Similarity=0.389 Sum_probs=206.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|++.+.||+|+||.||+|++..+++.||+|++..... ......+.+|++++++++||||++++++|...+..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 478999999999999999999999999999999875432 2223457789999999999999999999999999999999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
|++|+.+.... .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...... .....
T Consensus 80 ~~~~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~ 153 (279)
T cd06619 80 FMDGGSLDVYR----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTY 153 (279)
T ss_pred cCCCCChHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCC
Confidence 99975544332 3789999999999999999999999999999999999999999999999999876433 23345
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID---QLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
+++..|+|||++.+ ..++.++|+|||||++|+|++|..||....... .............+..
T Consensus 154 ~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 219 (279)
T cd06619 154 VGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV------------- 219 (279)
T ss_pred CCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC-------------
Confidence 78888999999976 568999999999999999999999986532111 0111111111110000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
......++++++||.+||+.||++||+++++++||||...
T Consensus 220 ---------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 220 ---------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred ---------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 0112357899999999999999999999999999999764
No 180
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.8e-45 Score=332.28 Aligned_cols=254 Identities=27% Similarity=0.462 Sum_probs=218.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||.|+||.||.+++..++..+++|.+............+.+|+.++++++|+||+++++++.+.+.++++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 69999999999999999999999999999999876654444455678999999999999999999999999999999999
Q ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
++ |+|.+.+.+. ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++............
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 98 5888888765 456899999999999999999999999999999999999999999999999999877554434445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+... ...
T Consensus 161 ~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~------------------ 219 (256)
T cd08221 161 VVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT------------------ 219 (256)
T ss_pred cCCCccccCHhhcCC-CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC------------------
Confidence 668889999999876 45788999999999999999999999887766666555431 100
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.....++.++.++|.+||..+|.+||++.++++|+|+
T Consensus 220 -------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 -------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 1113457899999999999999999999999999985
No 181
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3e-45 Score=344.83 Aligned_cols=265 Identities=26% Similarity=0.395 Sum_probs=219.3
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||+||+|.+..+++.||+|.+....... .....+.+|+++++.++|+||+++++.+.+....|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999999999999997654332 23345778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--
Q 015948 91 EFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-- 166 (397)
Q Consensus 91 e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-- 166 (397)
||+.| +|.+++... +..+++..++.++.||+.||.|||+.|++|+||||+||+|+.++.++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99985 788877654 35689999999999999999999999999999999999999999999999999875432211
Q ss_pred ---------------------------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 015948 167 ---------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID 219 (397)
Q Consensus 167 ---------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 219 (397)
.....+|+..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 1123467888999999976 557899999999999999999999998887766
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC----HHHHhcCCCCC
Q 015948 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT----AQQALEHRYFS 295 (397)
Q Consensus 220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~ 295 (397)
.+..+...- ..++ ....++.++.++|.+||..||++||| ++|++.||||+
T Consensus 240 ~~~~~~~~~-----~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~ 293 (316)
T cd05574 240 TFSNILKKE-----VTFP---------------------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293 (316)
T ss_pred HHHHHhcCC-----ccCC---------------------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence 655543210 0010 01125899999999999999999999 99999999999
Q ss_pred CCCCCCCC
Q 015948 296 SAPLPTEP 303 (397)
Q Consensus 296 ~~~~~~~~ 303 (397)
+..++...
T Consensus 294 ~~~~~~~~ 301 (316)
T cd05574 294 GVNWALIR 301 (316)
T ss_pred cCChhhcc
Confidence 87765543
No 182
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-45 Score=342.94 Aligned_cols=260 Identities=30% Similarity=0.492 Sum_probs=214.8
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
...++|.+.+.||+|+||.||+|.+..+++.||+|.+...... ....+.+|+.+++.++|+||++++++|..++.+|+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 3468999999999999999999999999999999998754332 23456789999999999999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
||||++| +|..++.+. .+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++.........
T Consensus 94 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 94 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred eecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 9999985 777776543 3889999999999999999999999999999999999999999999999999876544444
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
.....+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+....+..+... +..
T Consensus 172 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-~~~---------------- 233 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTP---------------- 233 (297)
T ss_pred cCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-CCC----------------
Confidence 445667888999999976 56889999999999999999999999776543322211100 000
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
.......++..+++||.+||..||++||+++++++||||....
T Consensus 234 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 234 --------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred --------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 0011234578899999999999999999999999999998644
No 183
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2e-45 Score=350.22 Aligned_cols=285 Identities=36% Similarity=0.575 Sum_probs=225.8
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------ 83 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~------ 83 (397)
+.++|.+.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++++++|+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 56899999999999999999999999999999999876443333344577899999999999999999988543
Q ss_pred CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 84 ~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
...|+++++++++|...+... .+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~ 172 (345)
T cd07877 95 NDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 172 (345)
T ss_pred ccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence 457899999988888777643 489999999999999999999999999999999999999999999999999986532
Q ss_pred CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
......++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..+....+...+..+.......
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T cd07877 173 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 249 (345)
T ss_pred ---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHh
Confidence 22345678889999998765668899999999999999999999999888777777777766554433322221110
Q ss_pred ccc---ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 244 DYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 244 ~~~---~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
... .........+.......++++++||.+||+.||.+|+++.++++||||.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 250 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 000 00011111122223346889999999999999999999999999999987544
No 184
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.2e-45 Score=336.99 Aligned_cols=256 Identities=27% Similarity=0.369 Sum_probs=208.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH------ 82 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~------ 82 (397)
..+.|.+.+.||+|+||.||+|.+..+++.||+|.+..... ....+.+|+.+++.+ +|+||++++++|..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 46789999999999999999999999999999999875432 233567899999998 69999999999864
Q ss_pred CCeEEEEEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 83 KGNLHLVFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 83 ~~~~~lv~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
...+|+||||++ |+|..++... ...+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 346899999998 5787777663 34589999999999999999999999999999999999999999999999999987
Q ss_pred eCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 161 ~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
............|+..|+|||++.+ ...++.++|||||||++|||++|..||...........+... .
T Consensus 161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~----~---- 232 (272)
T cd06637 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----P---- 232 (272)
T ss_pred cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC----C----
Confidence 6544444455678888999999863 235788999999999999999999999765543333222110 0
Q ss_pred CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
........++.++.+||.+||..||.+|||+.+++.||||
T Consensus 233 ------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 233 ------------------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ------------------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0001112357899999999999999999999999999997
No 185
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.1e-45 Score=347.20 Aligned_cols=286 Identities=39% Similarity=0.619 Sum_probs=227.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCC--CcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec----CCe
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKT--GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH----KGN 85 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~----~~~ 85 (397)
+|.+.+.||+|+||.||+|++..+ +..||+|.+............+.+|+.+++++ +|+||+++++.+.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 589999999999999999999888 89999999875433333344577899999999 59999999986432 356
Q ss_pred EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
+|+++||++++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+....
T Consensus 81 ~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 8999999999998888654 458999999999999999999999999999999999999999999999999998764322
Q ss_pred C----cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 166 R----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 166 ~----~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
. .....+++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..++..++.+....+.....
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 1 123356788899999987656789999999999999999999999999888888888888877644322211111
Q ss_pred Cccc---cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 242 LPDY---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
.... ..........+....+.++..+.+||.+||+.||++|||+.+++.|||+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~ 300 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHD 300 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcC
Confidence 0000 001111222334455667899999999999999999999999999999976543
No 186
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.4e-45 Score=341.34 Aligned_cols=255 Identities=26% Similarity=0.408 Sum_probs=216.3
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|++.+.||+|+||.||+|.+..+++.||+|++...... ......+.+|++++++++||||+++++.+.++..+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 4799999999999999999999999999999998754322 223445778999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||+. |+|.+.+... ..+++..+..++.||+.||.|||++|++|+||+|.||||+.++.+||+|||++...... ..
T Consensus 81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~ 156 (290)
T cd05580 81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TY 156 (290)
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CC
Confidence 9996 6888887665 45899999999999999999999999999999999999999999999999999876443 33
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+....
T Consensus 157 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------------------- 214 (290)
T cd05580 157 TLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK--------------------- 214 (290)
T ss_pred CCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------------------
Confidence 4567888999999876 467899999999999999999999998777554444443210
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
..+...++..++++|.+||..||.+|+ +++++++||||....+
T Consensus 215 -------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 262 (290)
T cd05580 215 -------VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDW 262 (290)
T ss_pred -------ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCH
Confidence 011223478999999999999999999 8999999999987654
No 187
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.6e-45 Score=338.19 Aligned_cols=256 Identities=29% Similarity=0.430 Sum_probs=215.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++.++..+|+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 579999999999999999999999999999999875432 2223456789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|+.| +|.+.+... .+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||+++...........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 80 YCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred eeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 9985 777777654 5899999999999999999999999999999999999999999999999999887655444455
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||.+.+ ..++.++|||||||++|+|++|.+||...+.......+.... +...+
T Consensus 158 ~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~~~------------- 219 (274)
T cd06609 158 FVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN----PPSLE------------- 219 (274)
T ss_pred ccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC----CCCCc-------------
Confidence 677888999999977 448999999999999999999999998766544433332210 00000
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
...++.++.++|.+||..||++|||++++++||||...
T Consensus 220 ---------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 220 ---------GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred ---------ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 01147899999999999999999999999999999764
No 188
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.6e-45 Score=336.82 Aligned_cols=261 Identities=28% Similarity=0.371 Sum_probs=209.4
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
.....++|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|+.+++.++||||+++++++..++.+
T Consensus 4 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 4 RRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKL 81 (267)
T ss_pred ccCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Confidence 34456789999999999999999999999999999999864422 1223466899999999999999999999999999
Q ss_pred EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+||||+++ +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999995 677766543 458999999999999999999999999999999999999999999999999998765443
Q ss_pred CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 166 RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
.......++..|+|||.+.+ ...++.++|+|||||++|||++|.+||......+....+... ..
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~--~~------------ 226 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--NF------------ 226 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC--CC------------
Confidence 33344567888999999843 244778999999999999999999988655433222111100 00
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 293 (397)
..+.. .....++..+.+||.+||..||++|||++++++|+|
T Consensus 227 --------~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 227 --------QPPKL-KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --------CCCCC-ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 00000 111245789999999999999999999999999987
No 189
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-46 Score=355.44 Aligned_cols=265 Identities=26% Similarity=0.443 Sum_probs=220.3
Q ss_pred Chhhhcceeeee-----eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee
Q 015948 7 SKKVADRYLKRE-----VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP 81 (397)
Q Consensus 7 ~~~~~~~y~i~~-----~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~ 81 (397)
.+++.-.|+..+ +||+|.||+||-|+|..+....|||.+.... ....+-+..||.+.++|+|.|||++++.+.
T Consensus 565 ne~iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~s 642 (1226)
T KOG4279|consen 565 NEKIEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVS 642 (1226)
T ss_pred ccceEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccC
Confidence 344544555433 6999999999999999999999999986432 233445678999999999999999999999
Q ss_pred cCCeEEEEEEccc-cCHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeecc
Q 015948 82 HKGNLHLVFEFME-TDLETVIRNTNIFL--SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGL 157 (397)
Q Consensus 82 ~~~~~~lv~e~~~-g~L~~~~~~~~~~l--~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~ 157 (397)
.++++-|.||-++ |+|..+++..-+++ .|..+-.|.+||++||.|||++.|||||||-+||||+. .|.+||+|||-
T Consensus 643 enGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGT 722 (1226)
T KOG4279|consen 643 ENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGT 722 (1226)
T ss_pred CCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEeccccc
Confidence 9999999999998 57888888887888 88999999999999999999999999999999999985 58999999999
Q ss_pred ceeeCCCCCcccccccCceeeChhccc-CccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 158 ARIFGSPDRRFTHQVFARWYRAPELLF-GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 158 a~~~~~~~~~~~~~~~t~~y~aPE~l~-~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
++.+..-.....+..||..|||||++. |...|+.++|||||||++.||.||+|||........ .|++. |
T Consensus 723 sKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--AMFkV-G------- 792 (1226)
T KOG4279|consen 723 SKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--AMFKV-G------- 792 (1226)
T ss_pred chhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--hhhhh-c-------
Confidence 998876666667788999999999994 456799999999999999999999999976543321 22221 1
Q ss_pred CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
....-..++..+|.+++.||.+|+..||.+||++.++|..||++..+
T Consensus 793 ---------------myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~ 839 (1226)
T KOG4279|consen 793 ---------------MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN 839 (1226)
T ss_pred ---------------ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence 00111233446689999999999999999999999999999998763
No 190
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-46 Score=349.30 Aligned_cols=261 Identities=27% Similarity=0.415 Sum_probs=209.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv 89 (397)
...|+++++||+||.+.||++.... ...||+|.+............+.+|+.+|.+|+ |.+||+|+||-..++++|||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 5679999999999999999997653 466777776655555555667889999999995 79999999999999999999
Q ss_pred EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--Cc
Q 015948 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RR 167 (397)
Q Consensus 90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--~~ 167 (397)
|||=+.||...+.+....++.-.++.|..|++.|+.++|+.||||.||||.|+|+ -.|.+||+|||+|..+.... -.
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCcccccee
Confidence 9999999999999887766666999999999999999999999999999999999 46889999999998875433 23
Q ss_pred ccccccCceeeChhcccCcc----------CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 168 FTHQVFARWYRAPELLFGAK----------QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~----------~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
...++||..||+||.+.... ..++++||||||||||+|+.|++||..-.+ .+.++....
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI~--------- 586 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAIT--------- 586 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhhc---------
Confidence 45789999999999984311 246899999999999999999999974322 222222211
Q ss_pred CCCCCccccccccccCCCccccCCCCC--HHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 238 DLAYLPDYVEYQYVAAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
.|.....||.++ .++.++++.||.+||++||++.++|+|||++..+.
T Consensus 587 ---------------~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i 635 (677)
T KOG0596|consen 587 ---------------DPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPI 635 (677)
T ss_pred ---------------CCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccc
Confidence 111111222222 34999999999999999999999999999875443
No 191
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.5e-45 Score=339.48 Aligned_cols=258 Identities=32% Similarity=0.519 Sum_probs=215.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
..+|++.+.||.|+||+||+|.+..+|+.||+|.+..... .....+.+|+.+++.++|+||+++++.+.....+|+|+
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 4679999999999999999999999999999999875432 23446778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||+.| +|...+... .+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++...........
T Consensus 96 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (296)
T cd06655 96 EYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS 173 (296)
T ss_pred EecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCC
Confidence 99985 666655543 489999999999999999999999999999999999999999999999999887654443344
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+.......+... ....
T Consensus 174 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~----------------- 234 (296)
T cd06655 174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE----------------- 234 (296)
T ss_pred CcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc-----------------
Confidence 5567888999999876 55889999999999999999999999887765554443221 0000
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
......+++.+.+||.+||..||.+||++.+++.||||....
T Consensus 235 -------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 235 -------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred -------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 011124578999999999999999999999999999997643
No 192
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.8e-45 Score=339.36 Aligned_cols=279 Identities=43% Similarity=0.719 Sum_probs=231.5
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEEEc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
|.+.+.||+|+||+||+|....+++.|+||.+...... .......+|+..+++++ |+||+++++++..++..|+||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 78899999999999999999989999999998654332 12223457999999999 99999999999999999999999
Q ss_pred cccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 93 METDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 93 ~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
++|+|...+.... ..+++..+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~ 158 (283)
T cd07830 80 MEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-PYTDY 158 (283)
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-CcCCC
Confidence 9999999887764 468999999999999999999999999999999999999999999999999998764322 23345
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
.++..|+|||++.+...++.++|+|||||++|+|++|+++|...+..+.+..+...++......|++...+.........
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 67888999999876566899999999999999999999999999998888888888887776666544333222222111
Q ss_pred --cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 252 --AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 252 --~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.........+..+.++++||.+||+.||++|||+.|++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 1112233445557899999999999999999999999999997
No 193
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=8.1e-45 Score=343.63 Aligned_cols=286 Identities=36% Similarity=0.606 Sum_probs=226.1
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~l 88 (397)
+.++|.+.+.||.|+||.||+|.+..+++.||+|++.+..........+.+|+.+++.++||||++++++|.. ...+|+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 5789999999999999999999999999999999987654434444567789999999999999999999865 568999
Q ss_pred EEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 89 v~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|+||++++|...+... .+++..+..++.||+.||.|||++||+||||+|.||+++.++.++|+|||++..... ..
T Consensus 88 v~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---~~ 162 (328)
T cd07856 88 VTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---QM 162 (328)
T ss_pred EeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---Cc
Confidence 9999998888777643 478899999999999999999999999999999999999999999999999976432 22
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC---CCCccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL---AYLPDY 245 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~ 245 (397)
....++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.........+.+.++......+... ....-.
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd07856 163 TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFV 242 (328)
T ss_pred CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHH
Confidence 34466778999999876567899999999999999999999999888776666666665554432211100 000000
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP 300 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~ 300 (397)
.........+.....+.++.++.++|.+||+.+|++|||+++++.|+||.....+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 0000011112233445678999999999999999999999999999999765443
No 194
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.5e-45 Score=333.33 Aligned_cols=258 Identities=31% Similarity=0.420 Sum_probs=213.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||.||+|.+..+++.+++|++...... ....+.+|+.+++.++||||+++++++.+.+.+|++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 46899999999999999999999999999999999754332 3456778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++| +|..++......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 99995 67766666546799999999999999999999999999999999999999999999999999987654433344
Q ss_pred ccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 170 HQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
...++..|+|||.+.+. ..++.++|+|||||++|+|++|.+||.+.+.......+...- ..+..
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~--~~~~~------------ 225 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSN--FPPPK------------ 225 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CCCcc------------
Confidence 56678889999998653 257889999999999999999999998776555444332210 00000
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 293 (397)
.......+.++.+||.+||..||.+|||+.+++.|+|
T Consensus 226 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 226 ---------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ---------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 0011234678999999999999999999999999998
No 195
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.9e-45 Score=334.87 Aligned_cols=253 Identities=25% Similarity=0.501 Sum_probs=208.6
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-------ccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-------VNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
+|.+.+.||+|+||.||+|.+..+++.||+|.+........ ....+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 58899999999999999999998999999999875433221 12346689999999999999999999999999
Q ss_pred EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
.++||||++| +|..++... ..+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||+++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 9999999985 777777654 45899999999999999999999999999999999999999999999999999876422
Q ss_pred CC------cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948 165 DR------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (397)
Q Consensus 165 ~~------~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 238 (397)
.. ......++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------- 229 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS--------- 229 (267)
T ss_pred cccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---------
Confidence 11 1122346778999999876 4578899999999999999999999987665544433322100
Q ss_pred CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
......++..+.++|.+||+.||.+||++.++++||||
T Consensus 230 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 230 ------------------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ------------------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 01122457899999999999999999999999999997
No 196
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.2e-45 Score=338.17 Aligned_cols=258 Identities=27% Similarity=0.405 Sum_probs=207.7
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHH-HHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~-l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+........ ...+..|+.+ ++.+.||||+++++++..++.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 479999999999999999999999999999999876533222 2345556665 66778999999999999999999999
Q ss_pred EccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 91 EFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 91 e~~~g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
||++|+|..++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.......
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 158 (283)
T cd06617 80 EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV- 158 (283)
T ss_pred hhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence 9999988777654 334689999999999999999999997 99999999999999999999999999998754322
Q ss_pred cccccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 167 RFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
......++..|+|||++.+. ..++.++|+|||||++|+|++|+.||... ...+.+..+...... ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~------ 228 (283)
T cd06617 159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP----QL------ 228 (283)
T ss_pred ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC----CC------
Confidence 22334577889999998542 34788999999999999999999998653 233333333221100 00
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
....+|.++.+||.+||..+|.+||++.++++||||...
T Consensus 229 ----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 229 ----------------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred ----------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 011357899999999999999999999999999999864
No 197
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.4e-45 Score=343.35 Aligned_cols=277 Identities=26% Similarity=0.418 Sum_probs=211.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|++.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|++++++++||||++++++|..++.+|+|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 479999999999999999999999999999999864322 2233457789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|++| +|..++.+. ..+++..+..++.||+.||.|||+ ++++||||||+|||++.++.+||+|||++...... ...
T Consensus 80 y~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~~ 156 (308)
T cd06615 80 HMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MAN 156 (308)
T ss_pred ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--ccc
Confidence 9985 777777654 558999999999999999999997 59999999999999999999999999998765332 223
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC------CC-
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA------YL- 242 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~- 242 (397)
..+++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+... ...++........ +++.. ..
T Consensus 157 ~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 232 (308)
T cd06615 157 SFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGE--AKESHRPVSGHPPD 232 (308)
T ss_pred cCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCcccccc--ccCCcccccCCCCC
Confidence 4567888999999866 568899999999999999999999997665332 2222221111000 00000 00
Q ss_pred -------ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 243 -------PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 243 -------~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
.+...+.....++ ..-...++.++++||.+||..||++|||+.++++||||...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 233 SPRPMAIFELLDYIVNEPPP-KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred ccchhhHHHHHHHHhcCCCc-cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0000000000000 00011357899999999999999999999999999999764
No 198
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.6e-45 Score=333.37 Aligned_cols=253 Identities=30% Similarity=0.469 Sum_probs=212.9
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||+|+||.||+|++..++..|++|.+..... ...+.+|+.+++.++|+||+++++.+..+..+|+++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 689999999999999999999998899999999865432 4567889999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|++| +|.+.+......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++............
T Consensus 79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence 9995 787777766667999999999999999999999999999999999999999999999999999876554433444
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+.. .....
T Consensus 159 ~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~--------------- 218 (256)
T cd06612 159 VIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN----KPPPT--------------- 218 (256)
T ss_pred ccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc----CCCCC---------------
Confidence 557778999999876 5688999999999999999999999987655433222111 00000
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
......++.++.++|.+||+.||.+|||+.|+++||||
T Consensus 219 ------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 219 ------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 01112357899999999999999999999999999997
No 199
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7.7e-45 Score=333.16 Aligned_cols=260 Identities=27% Similarity=0.409 Sum_probs=214.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||.|+||+||+|....++..+|+|++....... ....+.+|+.+++.++|+||+++++.+..+...|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 57999999999999999999998899999999987544333 44567889999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948 92 FMET-DLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~- 167 (397)
|+.| +|...+.... ..+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++..+......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 159 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT 159 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence 9985 7777776542 45899999999999999999999999999999999999999999999999998776543322
Q ss_pred ---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 168 ---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 168 ---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
.....++..|+|||++.....++.++|+|||||++|+|++|+.||...+....+...... . +..+..
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~-~~~~~~------ 229 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---D-PPSLET------ 229 (267)
T ss_pred ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---C-CCCcCC------
Confidence 233457888999999876557899999999999999999999999877665544443322 0 000000
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
...+..++..+.+|+.+||..||++||+++++++||||
T Consensus 230 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 230 ------------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ------------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00123568899999999999999999999999999998
No 200
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-46 Score=354.40 Aligned_cols=258 Identities=24% Similarity=0.400 Sum_probs=226.0
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
-...|.+.+.||+|.|++|.+|++..++..||||.+.+..........+.+|+++|+.|+|||||+++.+.+....+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 35779999999999999999999999999999999988776665556688999999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|||+. |.+.+++.+.+ .+.+..++.++.|+..|++|||+++|+|||||++||||+.+.++||+|||++..+. .....
T Consensus 134 ~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-~~~~l 211 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD-YGLML 211 (596)
T ss_pred EEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec-ccccc
Confidence 99998 57888877654 47779999999999999999999999999999999999999999999999999886 45667
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
.+.+|++.|.|||++.+.++.+..+|+||||++||.|+.|..||++.+-.+.-.+.+..
T Consensus 212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g--------------------- 270 (596)
T KOG0586|consen 212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG--------------------- 270 (596)
T ss_pred cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee---------------------
Confidence 78999999999999999888899999999999999999999999988654433332211
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
...+.--+|-++.++|+++|..+|.+|++++++++|.|....
T Consensus 271 -------k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 271 -------KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred -------eecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 001122348899999999999999999999999999998654
No 201
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.3e-46 Score=316.70 Aligned_cols=276 Identities=32% Similarity=0.628 Sum_probs=221.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecC--CeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK--GNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~--~~~~ 87 (397)
.++|++.+++|+|.++.||.|++..+++.++||+++..+. ..+.+|++||..|. ||||++++|...+. ....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk-----kKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK-----KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH-----HHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 7899999999999999999999999999999999875433 35789999999997 99999999998664 4678
Q ss_pred EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceeeCCCC
Q 015948 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPD 165 (397)
Q Consensus 88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~~~~~ 165 (397)
+|+||++. +...+... ++...++.|+++|+.||+|||++||+|||+||.|++|+.. ..++|+|+|+|..+ .+.
T Consensus 112 LiFE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY-Hp~ 186 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPG 186 (338)
T ss_pred hHhhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhc-CCC
Confidence 99999995 55555443 8889999999999999999999999999999999999965 56999999999876 455
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCC-CCCCCCCcHHHHHHHHHHhCCCCCCCCCCC--CCC
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDL--AYL 242 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~ 242 (397)
......+.+++|-.||.+...+.|+.+-|+|||||+|..|++.+ |+|.|.++.+++.+|.+.+|+.....+-+- ..+
T Consensus 187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 66777888999999999998889999999999999999999865 889999999999999998886322111000 000
Q ss_pred cccccc--ccccCCCccccC-----CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 243 PDYVEY--QYVAAPPLRSLF-----PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 243 ~~~~~~--~~~~~~~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
+...+- ......++..+. .-.++++.|||.++|.+|-.+|+|+.|++.||||..
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 000000 000001111111 124799999999999999999999999999999964
No 202
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-45 Score=367.17 Aligned_cols=290 Identities=21% Similarity=0.293 Sum_probs=209.6
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCC-cEEEEEEee--------------cC-CccCCccchHHHHHHHHHhcCC
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIR--------------LG-KQKEGVNFTALREIKLLKELKS 70 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~aiK~i~--------------~~-~~~~~~~~~~~~E~~~l~~l~h 70 (397)
...+.++|++.+.||+|+||+||+|..+... ...++|.+. +. .........+.+|+.+|++++|
T Consensus 143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H 222 (501)
T PHA03210 143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH 222 (501)
T ss_pred chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC
Confidence 3456789999999999999999998765432 222222111 00 0111123346689999999999
Q ss_pred CCeeEEEeeeecCCeEEEEEEccccCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948 71 PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (397)
Q Consensus 71 p~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~ 146 (397)
+||+++++++.+.+..|+|+|++.++|+.++.... .......++.++.||+.||+|||++||+||||||+||||+.
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC 302 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 99999999999999999999999999988876532 12346678899999999999999999999999999999999
Q ss_pred CCcEEEeeeccceeeCCCCC-cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC-CCCCC--CcHHHHH
Q 015948 147 HGQLKLADFGLARIFGSPDR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGS--SDIDQLG 222 (397)
Q Consensus 147 ~~~~kl~DFG~a~~~~~~~~-~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~-pf~~~--~~~~~~~ 222 (397)
+|.+||+|||+++.+..... .....+|+..|+|||++.+ ..++.++|||||||++|||++|.. ||.+. .....+.
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 99999999999987754332 2234678999999999977 568999999999999999999874 44332 3345556
Q ss_pred HHHHHhCCCCCCCCCCCCC-Cccccccccc--cCCCccccC--CCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 223 KIFAAFGTATPSQWPDLAY-LPDYVEYQYV--AAPPLRSLF--PSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 223 ~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~--~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
+++..++.. ...+++... +.++...... ....+..+. ..++.++.++|.+||++||.+|||+.|+|.||||...
T Consensus 382 ~~~~~~~~~-~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 382 KIIDSLSVC-DEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HHHHhcccC-hhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 665554432 222322100 0000000000 000011111 1357789999999999999999999999999999865
Q ss_pred C
Q 015948 298 P 298 (397)
Q Consensus 298 ~ 298 (397)
.
T Consensus 461 ~ 461 (501)
T PHA03210 461 E 461 (501)
T ss_pred C
Confidence 3
No 203
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.4e-45 Score=341.70 Aligned_cols=263 Identities=24% Similarity=0.432 Sum_probs=215.8
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
...+.|.....||+|+||.||++.+..++..||||.+..... .....+.+|+.+++.++|+||+++++.|..++..|+
T Consensus 19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~l 96 (292)
T cd06658 19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWV 96 (292)
T ss_pred chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEE
Confidence 345677778889999999999999999999999999865332 223457789999999999999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
||||++| +|..++.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 97 v~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 97 VMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred EEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 9999986 55555533 34899999999999999999999999999999999999999999999999999765443333
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
.....++..|+|||.+.+ ..++.++|+|||||++|||++|..||...+....+..+...+... .
T Consensus 175 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~----------- 238 (292)
T cd06658 175 RKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR----V----------- 238 (292)
T ss_pred CceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCc----c-----------
Confidence 344567888999999866 568899999999999999999999998777665554443321110 0
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 301 (397)
.....++..+.+||.+||..||.+|||++++++||||.....+.
T Consensus 239 ----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 239 ----------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred ----------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 01123478999999999999999999999999999998765544
No 204
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=9.7e-45 Score=331.79 Aligned_cols=254 Identities=28% Similarity=0.478 Sum_probs=212.9
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCeEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLHLVF 90 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~~lv~ 90 (397)
+|.+.+.||+|+||.||+|.+..++..||+|.+............+.+|+++++.++|+||+++++++. .+..+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 589999999999999999999999999999998765444444456778999999999999999999775 355789999
Q ss_pred Eccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhH-----hCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 91 EFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCH-----KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 91 e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH-----~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
||++ ++|...+... ...+++..++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9998 5787777653 456899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
...........++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------- 226 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK------------- 226 (265)
T ss_pred cCCcccccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC-------------
Confidence 654433445678888999999876 458899999999999999999999998876444433332210
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
...+....+.++.+++.+||..+|++||++.++++|||+
T Consensus 227 --------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 --------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred --------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 011223457899999999999999999999999999995
No 205
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-44 Score=329.77 Aligned_cols=250 Identities=29% Similarity=0.468 Sum_probs=210.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||+|+||.||++.+..++..||+|.++..... .....+.+|+.+++.++|+||+++++.|.+++.+|+||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 589999999999999999999999999999998754332 2334567899999999999999999999999999999999
Q ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 93 ME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 93 ~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
++ |+|...+... +..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++............
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 98 5888877653 445899999999999999999999999999999999999999999999999999877554444445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+.....
T Consensus 160 ~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------- 217 (255)
T cd08219 160 YVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY--------------------- 217 (255)
T ss_pred ccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC---------------------
Confidence 667888999999866 5688999999999999999999999987765555444432110
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
......++..+.+||.+||+.||++||++.++++-
T Consensus 218 ------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 ------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 01122347889999999999999999999999864
No 206
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.8e-45 Score=337.49 Aligned_cols=259 Identities=28% Similarity=0.427 Sum_probs=210.3
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|++++.||+|+||.||+|++..++..||+|.+.... .......+.+|+.++++++|+||+++++.+...+.+|+|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 47999999999999999999999999999999986532 22223467789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 92 FMET-DLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 92 ~~~g-~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|++| +|..++... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++..+... .
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~ 157 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--L 157 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--c
Confidence 9995 676666553 2358999999999999999999997 59999999999999999999999999999765332 2
Q ss_pred ccccccCceeeChhcccCcc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 168 FTHQVFARWYRAPELLFGAK-----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.....++..|+|||++.+.. .++.++|+|||||++|+|++|..||...........+........
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------- 227 (286)
T cd06622 158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP---------- 227 (286)
T ss_pred cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC----------
Confidence 23345677899999985422 357899999999999999999999976554443333222111111
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
..+.+.++.++.+||.+||..+|++||++++++.||||...
T Consensus 228 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 228 --------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred --------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 11223458999999999999999999999999999999754
No 207
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.6e-44 Score=334.35 Aligned_cols=256 Identities=28% Similarity=0.390 Sum_probs=207.6
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee------c
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP------H 82 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~------~ 82 (397)
-.+.|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+..|+.+++++ +|+||++++++|. .
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 3578999999999999999999999999999999986532 1223566799999998 6999999999984 3
Q ss_pred CCeEEEEEEcccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 83 KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 83 ~~~~~lv~e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
...+|++|||+++ +|..++... +..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 5689999999985 777777653 34588999999999999999999999999999999999999999999999999886
Q ss_pred eCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 161 ~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
............++..|+|||++.. ...++.++|+|||||++|+|++|.+||...........+... .+
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~----~~--- 243 (282)
T cd06636 171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----PP--- 243 (282)
T ss_pred hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC----CC---
Confidence 5443333445668888999999853 245788999999999999999999999766544333222110 00
Q ss_pred CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.......++.++.+||.+||+.||.+|||+.|+++||||
T Consensus 244 -------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 244 -------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 001112357899999999999999999999999999997
No 208
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.2e-44 Score=327.17 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=213.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||+|+||.||+|.+..+++.+|+|.+............+.+|+.+|+.++||||+++++.+..++.+++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 59999999999999999999999999999999986654444455678899999999999999999999999999999999
Q ss_pred ccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCCCCccc
Q 015948 93 MET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 93 ~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~~~~~~ 169 (397)
++| +|.+++... +..+++..+..++.+++.||.|||++|++|+||||+||+++.++ .+||+|||++....... ...
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-KAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-ccc
Confidence 984 788888764 34589999999999999999999999999999999999998654 58999999998765432 223
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+.......+......
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 219 (256)
T cd08220 160 TVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA------------------- 219 (256)
T ss_pred ccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC-------------------
Confidence 3567778999999976 55788999999999999999999999887665555444332110
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.+...++.++.++|.+||..||.+|||+.|+++||||
T Consensus 220 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 220 --------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred --------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 1112357899999999999999999999999999996
No 209
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2e-44 Score=331.68 Aligned_cols=257 Identities=30% Similarity=0.417 Sum_probs=210.0
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC-----
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK----- 83 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~----- 83 (397)
-.++|++.+.||.|+||+||+|.+..+++.|++|++..... ....+.+|+.+++++ .|+||++++++|...
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 36899999999999999999999999999999999875432 234577899999999 699999999998653
Q ss_pred -CeEEEEEEcccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948 84 -GNLHLVFEFMET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 84 -~~~~lv~e~~~g-~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a 158 (397)
..+|+||||+++ +|.+.+... +..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 458999999995 666665442 456899999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948 159 RIFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (397)
Q Consensus 159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 234 (397)
..............++..|+|||++.. ...++.++|||||||++|+|++|.+||........+..+.... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~ 236 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP----PP 236 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC----CC
Confidence 876554444455668888999999753 2346789999999999999999999998765555444432210 00
Q ss_pred CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.+ ......+.++++||.+||..||.+|||+.++++|||+
T Consensus 237 ~~---------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 TL---------------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred CC---------------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 00 0011247899999999999999999999999999996
No 210
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.3e-44 Score=332.78 Aligned_cols=259 Identities=27% Similarity=0.406 Sum_probs=207.7
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeee-----e
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAF-----P 81 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~-----~ 81 (397)
....++|.+.+.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++ .
T Consensus 14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 346789999999999999999999999999999999875422 1223566899999999 699999999987 3
Q ss_pred cCCeEEEEEEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948 82 HKGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (397)
Q Consensus 82 ~~~~~~lv~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~ 157 (397)
.++.+|+||||++| +|.+.+.. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~ 170 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV 170 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCc
Confidence 45679999999984 67766542 334689999999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948 158 ARIFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233 (397)
Q Consensus 158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 233 (397)
++.............++..|+|||++.. ...++.++|||||||++|+|++|..||...+....+..+... ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~----~~ 246 (286)
T cd06638 171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN----PP 246 (286)
T ss_pred eeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc----CC
Confidence 9876544333445568888999999853 234788999999999999999999999776544333221110 00
Q ss_pred CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
... ......+..+.+||.+||+.||++|||+.|+++|+||
T Consensus 247 ~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 247 PTL---------------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred Ccc---------------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 000 0111246789999999999999999999999999997
No 211
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.3e-44 Score=328.35 Aligned_cols=254 Identities=29% Similarity=0.477 Sum_probs=206.6
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc----CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK----EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
+|++.+.||+|+||+||+|.+ .+++.+|+|.+...... ......+.+|+.+++.++|+||+++++++.+.+.+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999986 47889999998754321 1122346789999999999999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC---
Q 015948 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP--- 164 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~--- 164 (397)
|+||+.| +|..++.+. ..+++..+..++.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 80 FMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 9999985 777777654 45899999999999999999999999999999999999999999999999998764321
Q ss_pred ---CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 165 ---DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 165 ---~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
........++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------- 226 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL----------- 226 (265)
T ss_pred ccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-----------
Confidence 112234557888999999876 56889999999999999999999999876554433332221000
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.......++.++.+||.+||..+|.+||++.++++||||
T Consensus 227 --------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 227 --------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred --------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011223458899999999999999999999999999997
No 212
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-44 Score=331.17 Aligned_cols=258 Identities=29% Similarity=0.506 Sum_probs=208.6
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC----CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE----GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
+|+..+.||+|+||.||+|.+..+++.||+|++....... .....+.+|+++++.++|+||+++++++.+.+++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4888999999999999999999999999999987543211 123457789999999999999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCCCC
Q 015948 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDR 166 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~~~ 166 (397)
||||+.| +|.+++.+ ...+++..+..++.||+.||.|||++|++|+||||+||+++.++ .++|+|||++........
T Consensus 81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 81 FVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred EEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 9999995 67666654 34689999999999999999999999999999999999998776 599999999987644321
Q ss_pred c----ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 167 R----FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 167 ~----~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
. .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...........+........
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 228 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT---------- 228 (268)
T ss_pred cCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC----------
Confidence 1 123456778999999876 5688999999999999999999999976554333333322111000
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
.......++.++.+++.+||..||.+||++.++++||||.
T Consensus 229 -------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 229 -------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred -------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 0112234578999999999999999999999999999984
No 213
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.6e-44 Score=335.89 Aligned_cols=261 Identities=29% Similarity=0.441 Sum_probs=212.3
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++||||+++++.+..++++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 4799999999999999999999999999999998765322 122345668999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---- 165 (397)
||++| +|..++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 99985 777777654 458999999999999999999999999999999999999999999999999986421100
Q ss_pred -----------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948 166 -----------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (397)
Q Consensus 166 -----------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 234 (397)
.......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+..+.+..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~---- 234 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---- 234 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC----
Confidence 01112346778999999876 56899999999999999999999999887766655554432110
Q ss_pred CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCC
Q 015948 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPL 299 (397)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~ 299 (397)
++ .....++.++.+||.+||+.||++||+ +.++++||||....+
T Consensus 235 -~~--------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~ 281 (305)
T cd05609 235 -WP--------------------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDW 281 (305)
T ss_pred -CC--------------------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCH
Confidence 00 001135789999999999999999998 799999999976544
No 214
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.2e-44 Score=331.92 Aligned_cols=258 Identities=28% Similarity=0.405 Sum_probs=208.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC-----
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK----- 83 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~----- 83 (397)
..++|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++ +||||++++++|...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 4788999999999999999999999999999999986432 2233566899999999 899999999998643
Q ss_pred CeEEEEEEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 84 GNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 84 ~~~~lv~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
+.+|+||||++| +|.+++.. ....+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 468999999985 77666643 34568999999999999999999999999999999999999999999999999998
Q ss_pred eeCCCCCcccccccCceeeChhcccCcc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948 160 IFGSPDRRFTHQVFARWYRAPELLFGAK----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (397)
Q Consensus 160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 235 (397)
.............++..|+|||++.... .++.++|||||||++|+|++|++||........+..+.... +..
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~----~~~ 252 (291)
T cd06639 177 QLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP----PPT 252 (291)
T ss_pred hcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC----CCC
Confidence 7654333334456788899999985432 36789999999999999999999998776655554432210 000
Q ss_pred CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
. ......+..+.+||.+||+.||++||++.++++||||.
T Consensus 253 ~---------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 253 L---------------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred C---------------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 0 00123467899999999999999999999999999984
No 215
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2e-44 Score=330.93 Aligned_cols=251 Identities=17% Similarity=0.224 Sum_probs=203.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.++|.+.+.||+|+||.||+|.+. ..+..||+|.+..... ......+.+|+.+++.++||||+++++++..++.+|
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 467999999999999999999765 4567899999875432 222345778999999999999999999999999999
Q ss_pred EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+||||++| +|.+++......+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+........
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 99999995 67767766556789999999999999999999999999999999999999999999999998765422211
Q ss_pred -cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 167 -RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 167 -~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 227 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL-------------- 227 (266)
T ss_pred hcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC--------------
Confidence 1112234567999999876 568999999999999999774 99999888776665554322110
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++..+.+++.+||+.+|.+||+++++++
T Consensus 228 -------------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 228 -------------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 112335788999999999999999999999875
No 216
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-44 Score=337.84 Aligned_cols=261 Identities=25% Similarity=0.454 Sum_probs=214.3
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
..|.....||+|+||.||+|.+..+++.||+|++...... ....+.+|+.+++.+.||||+++++.|..++..|+|||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence 4455677899999999999999999999999998654322 23457789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|++| +|...+.. ..+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++............
T Consensus 99 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 99 FLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred cCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 9995 66665543 34899999999999999999999999999999999999999999999999999765444333445
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+..+.+..+... ...
T Consensus 177 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~---------------- 235 (297)
T cd06659 177 LVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS----PPP---------------- 235 (297)
T ss_pred eecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc----CCC----------------
Confidence 678889999999976 45889999999999999999999999877666555443211 000
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLPTE 302 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~ 302 (397)
.......++..+.++|.+||+.+|.+||+++++++||||.....+..
T Consensus 236 -----~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~ 282 (297)
T cd06659 236 -----KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPEC 282 (297)
T ss_pred -----CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCccc
Confidence 01112345789999999999999999999999999999987655443
No 217
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.6e-44 Score=336.25 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=215.5
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
....++|.+.+.||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||++++++|.+++..
T Consensus 11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~ 90 (307)
T cd06607 11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTA 90 (307)
T ss_pred CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeE
Confidence 34567899999999999999999999999999999998654322 22234577899999999999999999999999999
Q ss_pred EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
|+||||+.|++.+.+......+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 91 ~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 91 WLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred EEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 999999999998888766667999999999999999999999999999999999999999999999999998765332
Q ss_pred cccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
....++..|+|||++.+ ...++.++|||||||++|+|++|.+||.+.+.......+... ..+ .
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~---~~~-~--------- 233 (307)
T cd06607 169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN---DSP-T--------- 233 (307)
T ss_pred --CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC---CCC-C---------
Confidence 23456778999999852 345888999999999999999999999877655544333211 000 0
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
......+..+.+||.+||..||++||++.+++.||||...
T Consensus 234 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 234 -------------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred -------------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 0011247889999999999999999999999999999764
No 218
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.9e-44 Score=335.50 Aligned_cols=258 Identities=23% Similarity=0.316 Sum_probs=201.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC----------------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK----------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv 74 (397)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+..... ......+.+|+.+|++++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCee
Confidence 5789999999999999999997532 334799999875432 22234577899999999999999
Q ss_pred EEEeeeecCCeEEEEEEccc-cCHHHHHHhcC------------------CCCCHHHHHHHHHHHHHHHHHhHhCCcccc
Q 015948 75 ELIDAFPHKGNLHLVFEFME-TDLETVIRNTN------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135 (397)
Q Consensus 75 ~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHr 135 (397)
++++++.+.+..|+||||+. |+|.+++.... ..++...+..++.||+.||.|||++||+||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 99999999999999999998 58888775432 236778899999999999999999999999
Q ss_pred CCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCC
Q 015948 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPF 211 (397)
Q Consensus 136 Dlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~p 211 (397)
||||+|||++.++.+||+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|||++ +..|
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999986543321 1223344667999999876 568999999999999999986 5678
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 212 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
|.+.+..+.+..+...+....... .....+.++..+.+||.+||+.||++|||+.++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 242 YGELTDEQVIENAGEFFRDQGRQV--------------------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCcCCHHHHHHHHHHHhhhccccc--------------------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 877766665555433221110000 00112345789999999999999999999999954
No 219
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.9e-44 Score=346.91 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=201.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~ 84 (397)
.++|++.+.||+|+||.||+|++...| ..||+|++...... .....+.+|+.+++.+ +|+||++++++|...+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 567999999999999999999865443 57999998754332 2234577899999999 8999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948 85 NLHLVFEFME-TDLETVIRNTN---------------------------------------------------------- 105 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~---------------------------------------------------------- 105 (397)
.+|+|||||. |+|.+++.+..
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999998 68888775421
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc--ccccc
Q 015948 106 -----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR--FTHQV 172 (397)
Q Consensus 106 -----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~--~~~~~ 172 (397)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........ .....
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence 24788899999999999999999999999999999999999999999999999875433211 11223
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
++..|+|||++.+ ..++.++|||||||++|+|++ |.+||........+..+.......
T Consensus 276 ~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~-------------------- 334 (374)
T cd05106 276 LPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM-------------------- 334 (374)
T ss_pred CccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc--------------------
Confidence 4556999999976 568999999999999999997 999998765544433333221000
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....+++++.++|.+||+.||.+|||+.++++
T Consensus 335 ------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 335 ------SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ------cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001124789999999999999999999999875
No 220
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.6e-44 Score=330.93 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=199.2
Q ss_pred eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cchHHHHHHHHH---hcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREIKLLK---ELKSPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~~~~E~~~l~---~l~hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
.||+|+||.||++.+..+++.||+|.+......... .....+|..+++ ...|+||+.++++|..++..|+||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998765433222 222344544443 3478999999999999999999999998
Q ss_pred c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (397)
Q Consensus 95 g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 173 (397)
| +|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....... .....+
T Consensus 81 ~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVG 157 (279)
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccCcCC
Confidence 5 676666544 459999999999999999999999999999999999999999999999999997654332 234568
Q ss_pred CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI--DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
+..|+|||++.+...++.++|+|||||++|+|++|..||...... ..+...... .
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---~-------------------- 214 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---V-------------------- 214 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc---C--------------------
Confidence 889999999865466889999999999999999999999764322 222111100 0
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
...+.+.++.++.++|.+||..||++|+ +++++++||||.+..+
T Consensus 215 ----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~ 263 (279)
T cd05633 215 ----NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDW 263 (279)
T ss_pred ----CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCH
Confidence 0112234589999999999999999999 6999999999988554
No 221
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3e-44 Score=327.52 Aligned_cols=254 Identities=28% Similarity=0.506 Sum_probs=213.0
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|.+.+.||+|+||.||+|.++.+|..+|+|.+............+.+|+.+++.++|+||+++++.+.+.+..|+|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 58999999999999999999999999999999876543333445677899999999999999999999999999999999
Q ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc-EEEeeeccceeeCCCCCccc
Q 015948 93 ME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-LKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 93 ~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~-~kl~DFG~a~~~~~~~~~~~ 169 (397)
+. ++|.+.+.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++. +||+|||.+...........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 98 58888776543 35899999999999999999999999999999999999998864 69999999987755443344
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+....
T Consensus 161 ~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------------------- 218 (257)
T cd08225 161 TCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY--------------------- 218 (257)
T ss_pred ccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc---------------------
Confidence 4567888999999866 458899999999999999999999998766554444332210
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.....+.++.++.++|.+||..+|++|||+.+++.||||
T Consensus 219 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 ------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 011223557899999999999999999999999999997
No 222
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-44 Score=330.32 Aligned_cols=252 Identities=27% Similarity=0.431 Sum_probs=210.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
+|++.+.||.|+||.||+|.+..+++.||+|++....... .....+.+|++++++++||||+++++.+..+..+|+|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5899999999999999999999999999999997654322 334567789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|+.| +|...+.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~ 158 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTS 158 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cccc
Confidence 9985 777776654 569999999999999999999999999999999999999999999999999998764432 2334
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--IDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
..++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+. .+.+..... ..
T Consensus 159 ~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~----------------- 217 (258)
T cd05578 159 TSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE---TA----------------- 217 (258)
T ss_pred cCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc---cc-----------------
Confidence 556778999999876 5589999999999999999999999987664 222222111 00
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH--HHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA--QQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~--~e~l~hp~~ 294 (397)
.....+.++.++.++|.+||..||.+|+++ +|+++||||
T Consensus 218 -------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 218 -------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred -------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 011223457899999999999999999999 999999998
No 223
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7.4e-44 Score=324.97 Aligned_cols=254 Identities=28% Similarity=0.473 Sum_probs=210.8
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
+|+..+.||+|+||+||+|.+..++..|++|.+...... ......+.+|+.+++.++|+||+++++++..+..+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 588899999999999999999989999999998764422 12334577899999999999999999999999999999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
+||++| +|.+++.+. ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++....... ..
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~ 158 (258)
T cd06632 81 LELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FA 158 (258)
T ss_pred EEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-cc
Confidence 999985 777777654 458999999999999999999999999999999999999999999999999998764433 23
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....++..|+|||.+.....++.++|+|||||++|+|++|.+||...........+....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-------------------- 218 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-------------------- 218 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc--------------------
Confidence 445678889999998663348899999999999999999999998766444443332110
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
....+.+.++.++.+|+.+||+.+|.+||++.+++.|||+
T Consensus 219 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 219 ------ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ------cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 0011223458999999999999999999999999999996
No 224
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6e-44 Score=327.72 Aligned_cols=255 Identities=25% Similarity=0.462 Sum_probs=205.2
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC---ccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---VNFTALREIKLLKELKSPHIIELIDAFPH--KGNL 86 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~ 86 (397)
.+|.+.+.||+|+||.||+|.+..++..||+|++........ ....+.+|+.+++.++||||+++++.+.+ ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 368999999999999999999999999999999875543221 22346789999999999999999998865 4678
Q ss_pred EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
++++||++| +|...+.... .+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 999999985 7777776544 48999999999999999999999999999999999999999999999999997653221
Q ss_pred ---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|++||...........+... ...
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~---~~~--------- 227 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQ---PTN--------- 227 (266)
T ss_pred ccCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcC---CCC---------
Confidence 11223457778999999976 56889999999999999999999999876554443332111 100
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
..+...+++.+++|| +||..+|++||+++|+++||||+
T Consensus 228 --------------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 228 --------------PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred --------------CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 011123478899999 57778999999999999999985
No 225
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-45 Score=361.79 Aligned_cols=249 Identities=28% Similarity=0.443 Sum_probs=200.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeee-ec---C--
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAF-PH---K-- 83 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~-~~---~-- 83 (397)
.-+++|.+.|.+|||+.||+|++...|..||+|.+... .+.....+.+||++|+.|+ |+|||.++|.. .. +
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 34678999999999999999999988899999998754 3444456779999999997 99999999932 11 1
Q ss_pred -CeEEEEEEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEeeeccc
Q 015948 84 -GNLHLVFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 84 -~~~~lv~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~DFG~a 158 (397)
-.++|+||||. |+|.+++.++ ...|++.++..|++++++|+.+||... |||||||-|||||+.+|+.||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 24789999999 6999998754 234999999999999999999999998 999999999999999999999999999
Q ss_pred eeeCCCCC---------cccccccCceeeChhcc--cCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 015948 159 RIFGSPDR---------RFTHQVFARWYRAPELL--FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227 (397)
Q Consensus 159 ~~~~~~~~---------~~~~~~~t~~y~aPE~l--~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~ 227 (397)
+-...... .......|+.|+|||++ ..+...+.|+|||+|||+||-|+....||.......++.-
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng---- 269 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNG---- 269 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEec----
Confidence 75322211 11234458889999997 3446689999999999999999999999987744322211
Q ss_pred hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.| ..|+ ++..|..+++||..||+.||.+||++.|++.+
T Consensus 270 -------------------~Y---~~P~----~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 270 -------------------NY---SFPP----FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred -------------------cc---cCCC----CccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 11 1111 24568999999999999999999999998863
No 226
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.1e-44 Score=331.66 Aligned_cols=257 Identities=26% Similarity=0.421 Sum_probs=212.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+.|...+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+.|+||+++++.+.++..+|+||
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 4678899999999999999999999999999999875432 222345778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++| +|.+.+... .+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 82 e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 82 EYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred ecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 99985 777776543 489999999999999999999999999999999999999999999999999987654443334
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+.......+... ..
T Consensus 160 ~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~---~~----------------- 218 (277)
T cd06640 160 TFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN---NP----------------- 218 (277)
T ss_pred cccCcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC---CC-----------------
Confidence 4567788999999876 45789999999999999999999999876654433322110 00
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
......++..+.++|.+||..+|++||++.+++.|+||....
T Consensus 219 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 219 -------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred -------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 111223478899999999999999999999999999997643
No 227
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-45 Score=347.37 Aligned_cols=264 Identities=26% Similarity=0.413 Sum_probs=217.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
...|+.++.||-|+||.|.+++...|...||+|.+++.. ...........|.+||..-.++-||+||..|++++.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 456899999999999999999998999999999998654 2233344566799999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC----
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP---- 164 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~---- 164 (397)
|||++ ||+..++.+.+. |+|..+++|+.+|.+|+++.|.+|+|||||||+|||||.+|++||+|||+++-+...
T Consensus 708 MdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred EeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 99998 689999887665 999999999999999999999999999999999999999999999999998633100
Q ss_pred -----C---------------------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948 165 -----D---------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206 (397)
Q Consensus 165 -----~---------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell 206 (397)
+ -.....+||+.|+|||++.. ..|+..+|+||.|||||||+
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHh
Confidence 0 01124678999999999986 67999999999999999999
Q ss_pred hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---
Q 015948 207 NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI--- 283 (397)
Q Consensus 207 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~--- 283 (397)
.|++||...+..+.-.+++ +|.....++ .-..+|.++.++|.+++. +++.|+
T Consensus 866 ~g~~pf~~~tp~~tq~kv~---------nw~~~l~~~---------------~~~~ls~e~~~li~kLc~-sad~RLGkn 920 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVI---------NWRNFLHIP---------------YQGNLSKEALDLIQKLCC-SADSRLGKN 920 (1034)
T ss_pred hCCCCccCCCCCcceeeee---------ehhhccccc---------------cccccCHHHHHHHHHHhc-Chhhhhccc
Confidence 9999999887655443332 232222211 113569999999999764 788887
Q ss_pred CHHHHhcCCCCCCCCCCC
Q 015948 284 TAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 284 t~~e~l~hp~~~~~~~~~ 301 (397)
.++|+..||||+...+..
T Consensus 921 g~d~vKaHpfFkgIDfss 938 (1034)
T KOG0608|consen 921 GADQVKAHPFFKGIDFSS 938 (1034)
T ss_pred chhhhhcCccccccchHh
Confidence 477899999999877644
No 228
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.5e-44 Score=344.46 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=201.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~ 84 (397)
.++|++.+.||+|+||+||+|.+ ..++..||||+++.... ......+.+|+.+|+.+ +||||++++++|...+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 45899999999999999999974 34567899999864432 22234577899999999 8999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948 85 NLHLVFEFME-TDLETVIRNTN---------------------------------------------------------- 105 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~---------------------------------------------------------- 105 (397)
..|+|||||. |+|.+++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999998 68888876432
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc--
Q 015948 106 ----------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-- 167 (397)
Q Consensus 106 ----------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-- 167 (397)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 272 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV 272 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence 14678889999999999999999999999999999999999999999999999876443221
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
.....++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+......+.+++..-...
T Consensus 273 ~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 336 (375)
T cd05104 273 KGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM--------------- 336 (375)
T ss_pred cCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC---------------
Confidence 112234556999999976 568999999999999999997 889998765544444333210000
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
......+.++.+||.+||+.||++||++.|+++.
T Consensus 337 -----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 337 -----------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred -----------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0011236899999999999999999999999863
No 229
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.1e-44 Score=330.21 Aligned_cols=256 Identities=28% Similarity=0.403 Sum_probs=206.9
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL 97 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L 97 (397)
||+|+||+||+|.+..+|+.||+|++....... .....+.+|+.+|+.++||||+++++.|...+.+|+||||++ ++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999999999999999987643222 223345689999999999999999999999999999999998 578
Q ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCce
Q 015948 98 ETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176 (397)
Q Consensus 98 ~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~ 176 (397)
.+.+.+.. ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++..... ........++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCccccccCCCC
Confidence 87776644 3589999999999999999999999999999999999999999999999999876543 223334556778
Q ss_pred eeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCc
Q 015948 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256 (397)
Q Consensus 177 y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (397)
|+|||++.+ ..++.++|+|||||++|+|++|+.||...........+....... .
T Consensus 160 y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------~ 214 (277)
T cd05577 160 YMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM------------------------A 214 (277)
T ss_pred cCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc------------------------c
Confidence 999999876 448899999999999999999999998765422222221110000 0
Q ss_pred cccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCC
Q 015948 257 RSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 257 ~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~ 301 (397)
....+.+++.+.++|.+||+.||.+|| ++.++++||||....+..
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~ 264 (277)
T cd05577 215 VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR 264 (277)
T ss_pred ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence 112234589999999999999999999 899999999998766543
No 230
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.3e-44 Score=329.39 Aligned_cols=257 Identities=25% Similarity=0.456 Sum_probs=211.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv 89 (397)
.|.+.+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+. |||++++++++..+...|+|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 58899999999999999999999999999999875432 222345678999999996 99999999999999999999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|||+.| +|..++... .+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++..........
T Consensus 81 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 81 MEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred EecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 999985 676666543 58999999999999999999999999999999999999999999999999998876555444
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.........+. ...+..++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~----~~~~~~~~----------- 223 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP----KSKPPRLE----------- 223 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc----cCCCCCCC-----------
Confidence 556788889999998765667899999999999999999999998765433222110 00000000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
....+.++.+++.+||..||++||++.+++.|+||....
T Consensus 224 -----------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 224 -----------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred -----------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 012478999999999999999999999999999997643
No 231
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.7e-44 Score=330.75 Aligned_cols=257 Identities=29% Similarity=0.481 Sum_probs=210.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|++.+.||.|+||.||+|.+..+++.+|+|.+...... .....+.+|+++++.++||||+++++.+..++.+|+|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 4689999999999999999999999999999998765432 334467789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|++ ++|.+++......+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.++|+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~-- 157 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK-- 157 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh--
Confidence 999 58888877665679999999999999999999999 99999999999999999999999999998765332211
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHH-hCCCCCCCCCCCCCCccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAA-FGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~ 247 (397)
...++..|+|||.+.+ ..++.++|+|||||++|+|++|..||..... .+.....++. .....+
T Consensus 158 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------- 222 (265)
T cd06605 158 TFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP-------------- 222 (265)
T ss_pred cccCChhccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC--------------
Confidence 2567778999999876 5789999999999999999999999865421 1111111111 111100
Q ss_pred cccccCCCccccCCC-CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 248 YQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
..... ++.++++||.+||..||++|||+.+++.||||+.
T Consensus 223 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 223 ----------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred ----------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 00111 5789999999999999999999999999999964
No 232
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.5e-43 Score=324.16 Aligned_cols=257 Identities=28% Similarity=0.469 Sum_probs=209.9
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|.+.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++|+||+++++.+...+.+++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 69999999999999999999999999999999976654433455678999999999999999999999999999999999
Q ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc--
Q 015948 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT-- 169 (397)
Q Consensus 93 ~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~-- 169 (397)
+.+ +|.+.+.+. ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++...........
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 984 677766654 4589999999999999999999999999999999999999999999999999987654333221
Q ss_pred --ccccCceeeChhcccCcc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 170 --HQVFARWYRAPELLFGAK--QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 170 --~~~~t~~y~aPE~l~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
...++..|+|||++.+.. .++.++|||||||++|+|++|..||............... ......+
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~-------- 228 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIP-------- 228 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCC--------
Confidence 245677899999987632 2788999999999999999999999766433322221111 1111111
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
....++..+.+||.+||+.+|.+|||+.+++.|||+
T Consensus 229 -------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 229 -------------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred -------------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 112347889999999999999999999999999996
No 233
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.6e-43 Score=324.71 Aligned_cols=255 Identities=26% Similarity=0.479 Sum_probs=205.7
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC---CccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE---GVNFTALREIKLLKELKSPHIIELIDAFPHK--GNL 86 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~ 86 (397)
++|.+.+.||+|+||.||+|++..+|..||||.+....... .....+.+|+.+++.+.|+||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47999999999999999999999999999999986533221 1223567899999999999999999998763 578
Q ss_pred EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+||||++| +|.+.+.+. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 899999984 777777654 348899999999999999999999999999999999999999999999999998653221
Q ss_pred ---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|++||...........+.. ....
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~--------- 227 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTN--------- 227 (265)
T ss_pred ccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCC---------
Confidence 12233457788999999876 5688999999999999999999999987654444333211 1100
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
....+.++..+.++|.+|+. +|++||+++++++|||+.
T Consensus 228 --------------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 228 --------------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred --------------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 01123457889999999995 999999999999999973
No 234
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.4e-44 Score=332.39 Aligned_cols=261 Identities=21% Similarity=0.342 Sum_probs=207.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|...+.||+|+||.||++.+..+++.||+|.+...... .....+.+|+.++.++. |+||+++++++..++..+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 5677889999999999999999999999999998754332 22345678999999996 999999999999999999999
Q ss_pred EccccCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 91 EFMETDLETVIR----NTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 91 e~~~g~L~~~~~----~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
||+++++..+.. .....+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++.......
T Consensus 83 e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 83 ELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 999976654432 2235699999999999999999999975 99999999999999999999999999997654322
Q ss_pred CcccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 166 RRFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
......++..|+|||++.+. ..++.++|||||||++|+|++|++||..... ....+.+......+.. +
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~-~------ 232 (288)
T cd06616 163 -AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL-S------ 232 (288)
T ss_pred -ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC-C------
Confidence 22334577889999999764 3689999999999999999999999976542 2222222111111000 0
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
......++.++.+||.+||+.||++|||++++++||||..
T Consensus 233 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 233 -------------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred -------------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 0111245889999999999999999999999999999975
No 235
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-46 Score=346.81 Aligned_cols=266 Identities=24% Similarity=0.383 Sum_probs=233.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
..++.++..||-|+||.|=++........+|+|++++... ...+.+.+..|-+||..+..|+||++|-.|.++.++|++
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 4567788899999999999998776666799999987653 344555678899999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||-|- |.++..+++++ .|++..++.|+..+++|++|||++|||+|||||+|.+++.+|-+||.|||+|+.+++. ..+
T Consensus 499 mEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g-~KT 576 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG-RKT 576 (732)
T ss_pred HHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC-Cce
Confidence 99986 68888888765 4999999999999999999999999999999999999999999999999999998764 456
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
.+.|||+.|.|||++++ +..+.++|.||||+++|||++|.|||.+.+....+..|++++...
T Consensus 577 wTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i----------------- 638 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI----------------- 638 (732)
T ss_pred eeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-----------------
Confidence 67899999999999987 678999999999999999999999999999999999998875321
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTEPNK 305 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~~~~ 305 (397)
.++..++..+.+||.++...+|.+|.. ..+|..|.||.+..|..-...
T Consensus 639 ---------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~ 691 (732)
T KOG0614|consen 639 ---------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR 691 (732)
T ss_pred ---------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence 222456889999999999999999986 789999999999888654433
No 236
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=9.2e-44 Score=328.76 Aligned_cols=253 Identities=27% Similarity=0.413 Sum_probs=199.3
Q ss_pred eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cchHHHHH---HHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREI---KLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~~~~E~---~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
.||+|+||.||+|++..+++.||+|.+......... ......|. .+++...||+|++++++|...+.+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765432221 11233343 44555689999999999999999999999998
Q ss_pred c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (397)
Q Consensus 95 g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 173 (397)
| +|...+.. ...+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++..+... ......|
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVG 157 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCcCC
Confidence 5 66665554 456999999999999999999999999999999999999999999999999999765432 2234568
Q ss_pred CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (397)
Q Consensus 174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
+..|+|||++.+...++.++||||+||++|+|++|..||.+......... ....... .
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~-~-------------------- 215 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTM-A-------------------- 215 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HHHhhcc-C--------------------
Confidence 88899999997655689999999999999999999999987632211111 0000000 0
Q ss_pred CCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCC
Q 015948 254 PPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPL 299 (397)
Q Consensus 254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~ 299 (397)
.......|.++.++|.+||..||.+|+ ++.++++||||....+
T Consensus 216 ---~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~ 263 (278)
T cd05606 216 ---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW 263 (278)
T ss_pred ---CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence 011223489999999999999999999 9999999999987654
No 237
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-44 Score=334.40 Aligned_cols=256 Identities=27% Similarity=0.423 Sum_probs=210.5
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
+.+.|.+.+.||+|+||.||+|.+..++..||+|.+...... .....+.+|+.+++.++|+||+++++.|..+..+|+|
T Consensus 2 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 2 PEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred hHHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence 356788999999999999999999999999999998654322 2334577899999999999999999999999999999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|||++| +|...+.. ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..........
T Consensus 81 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06642 81 MEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred EEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhh
Confidence 999995 67666653 348999999999999999999999999999999999999999999999999998765443333
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....++..|+|||++.+ ..++.++|+|||||++|||++|.+||...........+... .+
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~----~~--------------- 218 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN----SP--------------- 218 (277)
T ss_pred hcccCcccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC----CC---------------
Confidence 34567788999999876 56889999999999999999999998765443332221110 00
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
......++.++.++|.+||..+|.+||++.++++||||..
T Consensus 219 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 219 --------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred --------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 0111234788999999999999999999999999999864
No 238
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.3e-43 Score=326.40 Aligned_cols=259 Identities=27% Similarity=0.473 Sum_probs=208.2
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC--------ccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--------VNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~--------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 84 (397)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+........ ....+.+|+.+++.++|+||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 58999999999999999999998999999998865322111 1234567999999999999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
..++||||+. |+|.+.+.+. ..+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 9999999998 5777777665 4689999999999999999999999999999999999999999999999999976533
Q ss_pred CC--CcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948 164 PD--RRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 164 ~~--~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
.. .......++..|+|||++.+.. .++.++|+|||||++|+|++|..||...+....+..+.. .......
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~---- 233 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN---KRSAPPI---- 233 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhc---cccCCcC----
Confidence 21 1123345677899999986533 478999999999999999999999976554433322211 1000000
Q ss_pred CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.....+.++.++.+||.+||..+|.+||+++++++||||
T Consensus 234 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 234 ---------------PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ---------------CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 012234568999999999999999999999999999996
No 239
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.1e-43 Score=327.50 Aligned_cols=259 Identities=27% Similarity=0.478 Sum_probs=213.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
..+|.-.+.||+|++|.||++.+..+++.+++|++..... .....+.+|+.+++.++|+||+++++++...+..|+|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 18 RSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hHhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence 3467777899999999999999999999999998864322 22335778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||+.| +|.+.+.. ..+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||++...........
T Consensus 96 e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 96 EFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred eccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 99984 77777765 4589999999999999999999999999999999999999999999999998876544333334
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+.... +...
T Consensus 174 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~----~~~~------------- 235 (285)
T cd06648 174 SLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL----PPKL------------- 235 (285)
T ss_pred cccCCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC----CCCC-------------
Confidence 4567888999999876 458899999999999999999999998776655555443320 0000
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
.....++..+.+||.+||+.+|++||++.++++|+||.....
T Consensus 236 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 236 --------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred --------cccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 011235789999999999999999999999999999987543
No 240
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.6e-43 Score=322.28 Aligned_cols=254 Identities=28% Similarity=0.504 Sum_probs=216.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|.+.+.||.|+||.||++.+..++..||+|++............+.+|+++++.++|+|++++++.+..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 58999999999999999999999999999999976555444555678899999999999999999999999999999999
Q ss_pred ccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 93 MET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 93 ~~g-~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
++| +|...+... +..+++..+..++.+|+.||.|||++|++|+||+|+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 985 788887765 3679999999999999999999999999999999999999999999999999998876554334
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.... .
T Consensus 161 ~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~----~--------------- 220 (258)
T cd08215 161 KTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ----Y--------------- 220 (258)
T ss_pred cceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC----C---------------
Confidence 44567888999999876 558899999999999999999999998776544444332210 0
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
..+....+.++.+++.+||..+|++|||+.++|+||||
T Consensus 221 --------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 --------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 11122457899999999999999999999999999997
No 241
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.8e-43 Score=331.11 Aligned_cols=261 Identities=26% Similarity=0.416 Sum_probs=217.1
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
....+.|...+.||+|+||+||+|++..+|..|++|++....... .....+.+|+.+++.++|+|++++++++.+....
T Consensus 17 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 96 (313)
T cd06633 17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTA 96 (313)
T ss_pred CCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence 345667888899999999999999999999999999987654322 2224567899999999999999999999999999
Q ss_pred EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
|+||||+.|++...+......+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++.....
T Consensus 97 ~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 97 WLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 99999999999998887777799999999999999999999999999999999999999999999999999865322
Q ss_pred cccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
.....++..|+|||++.. ...++.++|+|||||++|+|++|.+||...+.......+..... +
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~----------- 238 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS---P----------- 238 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC---C-----------
Confidence 234567888999999842 24578899999999999999999999887766555554432100 0
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
......++..+++||.+||+.+|.+||++.+++.||||....
T Consensus 239 ------------~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 239 ------------TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred ------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 001123467899999999999999999999999999998643
No 242
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7e-44 Score=332.08 Aligned_cols=258 Identities=29% Similarity=0.489 Sum_probs=213.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||+||++.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++.|...+..|+|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 6899999999999999999999988999999999864322 22346778999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++ ++|..++.+. .+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 96 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 96 EYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred ecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 9998 5777777654 378999999999999999999999999999999999999999999999999887655444444
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+....+..+... ....
T Consensus 174 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~----~~~~-------------- 234 (293)
T cd06647 174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----GTPE-------------- 234 (293)
T ss_pred cccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC----CCCC--------------
Confidence 5568888999999876 55789999999999999999999999876654433222110 0000
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
......++..+++||.+||..+|++||++.+++.|+||....
T Consensus 235 -------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 235 -------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred -------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 011123478899999999999999999999999999998654
No 243
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-43 Score=324.22 Aligned_cols=251 Identities=25% Similarity=0.437 Sum_probs=207.7
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL 97 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L 97 (397)
||.|+||.||+|++..+++.||+|++.+.... ......+.+|+.+++.++||||+++++.+.++..+|+|+||++ ++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999999999999999765432 2334467789999999999999999999999999999999998 578
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (397)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y 177 (397)
.+.+.+. ..+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++....... ......++..|
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~ 158 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEY 158 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCc
Confidence 7777654 348999999999999999999999999999999999999999999999999998765432 23344678889
Q ss_pred eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCC
Q 015948 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (397)
Q Consensus 178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (397)
++||.+.+ ..++.++|+|||||++|+|++|..||.... ..+....+......
T Consensus 159 ~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------- 212 (262)
T cd05572 159 VAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGK------------------------- 212 (262)
T ss_pred cChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCC-------------------------
Confidence 99999865 558899999999999999999999998776 33344333321000
Q ss_pred ccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCC
Q 015948 256 LRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPL 299 (397)
Q Consensus 256 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~ 299 (397)
.......++++.++|.+||..||++|++ ++|+++||||.+..+
T Consensus 213 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 213 -LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred -CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 0111233789999999999999999999 999999999987543
No 244
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-45 Score=313.66 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=211.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++..++..||+|+.|+||+++.+.+|...|||.++.....++ ..+++..+.++... .+|+||+.+++|..+..+++.|
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee-~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHH-HHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 345667889999999999999999999999999987655543 33566666665544 5899999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|.|..=+..+++.-..+++|..+-.+...++.||.||..+ ||+|||+||+|||+|+.|++||||||++-.+-+. ..-+
T Consensus 171 elMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-kAht 249 (391)
T KOG0983|consen 171 ELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-KAHT 249 (391)
T ss_pred HHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc-cccc
Confidence 9998655555665566799999999999999999999854 8999999999999999999999999999876443 2334
Q ss_pred ccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 170 HQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
...|.+.|||||.+.- ...|+.++||||||++|+||.||+.||.+. .+.+.+-++.+... |
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP---P------------- 313 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP---P------------- 313 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC---C-------------
Confidence 5567778999999843 346999999999999999999999999985 56788877765311 1
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.-..-...|+++.+|+..||++|+.+||...++|+|||+..
T Consensus 314 ---------~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 314 ---------LLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred ---------CCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 11111235999999999999999999999999999999864
No 245
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=320.42 Aligned_cols=311 Identities=23% Similarity=0.332 Sum_probs=242.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l 88 (397)
.++|.++++||+|+|++|.++++++|.+.||+|++++....+. .......|..+..+- +||++|-++.+|+.+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 5789999999999999999999999999999999987654332 233445677777765 68999999999999999999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|.||++ |+|...+.++.. ++++.++.|..+|+-||.|||++||++||||.+|+||+..|++||+|+|+++..-.+...
T Consensus 329 vieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~ 407 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT 407 (593)
T ss_pred EEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence 999998 588887776654 999999999999999999999999999999999999999999999999999987777778
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC-------CCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG-------SSDIDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
..+.+||+.|.|||++.+ ..|+.++|+|+|||++|||+.|+.||+- .+..+.+-+++-.-.
T Consensus 408 tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq----------- 475 (593)
T KOG0695|consen 408 TSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ----------- 475 (593)
T ss_pred cccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc-----------
Confidence 889999999999999988 6799999999999999999999999962 122223322221100
Q ss_pred CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC------HHHHhcCCCCCCCCCCCCCCCCCCcccccc
Q 015948 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRYFSSAPLPTEPNKLPRPATKRA 314 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t------~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~ 314 (397)
-.++..+|-.+..+++..|.+||.+|.. ..++..|+||....|..-..+...|+..+.
T Consensus 476 ----------------iriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~ 539 (593)
T KOG0695|consen 476 ----------------IRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQ 539 (593)
T ss_pred ----------------ccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCc
Confidence 1233455778889999999999999974 688999999998887654333333333222
Q ss_pred ----CCCCCCCC--CCCCcccCCcccccCCCCCCCCCCCCCC
Q 015948 315 ----SKASDFNP--QEGPTVLSPPRKTRRVMPDREGFEGNAN 350 (397)
Q Consensus 315 ----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
-....+.. ..++..++|...-.....+++.|+|...
T Consensus 540 i~~d~~l~~fd~qft~e~~qltpdd~d~i~ridqsefegfey 581 (593)
T KOG0695|consen 540 ITDDYGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEFEGFEY 581 (593)
T ss_pred cccccCccccccccccCCcccCCCCHHHHHhcchhhcCccee
Confidence 22223333 2444555555444444456777777654
No 246
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2e-43 Score=323.27 Aligned_cols=256 Identities=29% Similarity=0.499 Sum_probs=214.0
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|.+.+.||+|++|.||+|.+..+++.|++|++...... .....+.+|+.++..++|+||+++++++...+.+|+|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 4689999999999999999999999999999998765432 334567789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
|++ ++|.+.+... ..+++..+..++.||+.||.|||+ +|++|+||+|+||+++.++.++|+|||++...........
T Consensus 80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 999 5777777654 569999999999999999999999 9999999999999999999999999999987755444433
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--cH-HHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--DI-DQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
...++..|+|||.+.+ ..++.++|+||||+++|+|++|.+||.... .. +....+.. ...
T Consensus 159 ~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----~~~------------- 220 (264)
T cd06623 159 TFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD----GPP------------- 220 (264)
T ss_pred ceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc----CCC-------------
Confidence 5567788999999876 568899999999999999999999998775 22 22222211 000
Q ss_pred ccccccCCCccccCCC-CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
...... ++..+.++|.+||..+|++||++.++++|||++..
T Consensus 221 ----------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 221 ----------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred ----------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 011122 57899999999999999999999999999999753
No 247
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1e-43 Score=329.01 Aligned_cols=252 Identities=22% Similarity=0.328 Sum_probs=206.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.++|++.+.||+|+||.||+|.+...+ ..||+|.+..... ......+.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 467999999999999999999876555 6799998864322 2223457789999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc
Q 015948 86 LHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ 149 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~ 149 (397)
.|++|||++ |+|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence 999999998 58888876532 34788999999999999999999999999999999999999999
Q ss_pred EEEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 015948 150 LKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA 226 (397)
Q Consensus 150 ~kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~ 226 (397)
++|+|||++....... .......+++.|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+....+..
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS 241 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9999999998654332 12334456778999999876 458999999999999999997 9999988776665555433
Q ss_pred HhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
... ......++.++.+|+.+||+.||.+||++.+++++
T Consensus 242 ~~~---------------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 242 RQL---------------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCc---------------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 210 01123458999999999999999999999999874
No 248
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.3e-43 Score=323.15 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=200.3
Q ss_pred hhcceeeeeee--eecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948 10 VADRYLKREVL--GEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 10 ~~~~y~i~~~L--G~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 86 (397)
..++|.+.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.....+ +|+||+++++.|...+.+
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 35678887777 99999999999999999999999986543221 133333222 799999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP 164 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~ 164 (397)
|+||||++ |+|..++.... .+++..++.++.||+.||.|||++|++||||||+||+++.++ .++|+|||++......
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 99999998 58888887654 699999999999999999999999999999999999999998 9999999999876433
Q ss_pred CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCCCCCCCCCCCc
Q 015948 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-LGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 165 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
. ...++..|+|||++.+ ..++.++|+|||||++|+|++|..||........ ...+.... ..
T Consensus 164 ~----~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~------------ 225 (267)
T PHA03390 164 S----CYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK------------ 225 (267)
T ss_pred c----cCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc------------
Confidence 2 2356778999999976 5688999999999999999999999986543321 12221111 00
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC-HHHHhcCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-AQQALEHRYFSS 296 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-~~e~l~hp~~~~ 296 (397)
.....+.+++.+.+||.+||+.||.+|++ .+++|+||||.+
T Consensus 226 ------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 ------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred ------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 00122356899999999999999999996 599999999964
No 249
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=344.23 Aligned_cols=245 Identities=27% Similarity=0.441 Sum_probs=205.2
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHH-hcCCCCeeEEEeeeecCCeEE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK-ELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~-~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.+.+.|.+...+|.|+|+.|-.+.+..+++.+++|++.+..... .+|+.++. .-+||||+++.+.+.++.+.|
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~------~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN------QDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccccccc------ccccchhhhhcCCCcceeecceecCCceee
Confidence 36788999999999999999999999999999999997662221 25775554 458999999999999999999
Q ss_pred EEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE-ccCCcEEEeeeccceeeCCCC
Q 015948 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 88 lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl-~~~~~~kl~DFG~a~~~~~~~ 165 (397)
+|||++.| .+++.+..... +. .++..|+++|+.|+.|||++|++||||||+|||+ +..|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred eeehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 99999996 56666665442 33 7888899999999999999999999999999999 68999999999999876443
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
..+.+.|..|.|||++.. ..|+.++||||||++||+||+|+.||........+ ...++.....
T Consensus 470 --~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei---~~~i~~~~~s----------- 532 (612)
T KOG0603|consen 470 --CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEI---HTRIQMPKFS----------- 532 (612)
T ss_pred --hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHH---HHhhcCCccc-----------
Confidence 455677888999999974 78999999999999999999999999887665222 2222221111
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
..+|+.+++||.+||+.||.+|+++.+++.||||
T Consensus 533 ---------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 533 ---------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ---------------cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 3569999999999999999999999999999999
No 250
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.5e-43 Score=322.87 Aligned_cols=254 Identities=27% Similarity=0.414 Sum_probs=203.1
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
......||+|+||.||+|.+..++..||+|.+..... .....+.+|+.+++.++|+||+++++++..++..|+|+||+
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence 3345689999999999999999999999998764432 22335778999999999999999999999999999999999
Q ss_pred c-cCHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCCCCCccc
Q 015948 94 E-TDLETVIRNTNIFL--SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 94 ~-g~L~~~~~~~~~~l--~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
. ++|...+......+ ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++...........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~ 167 (268)
T cd06624 88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE 167 (268)
T ss_pred CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccc
Confidence 8 58888887654445 88899999999999999999999999999999999976 67999999999987644333333
Q ss_pred ccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 170 HQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
...++..|+|||++.+. ..++.++|+|||||++|+|++|.+||.................
T Consensus 168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------- 228 (268)
T cd06624 168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK------------------- 228 (268)
T ss_pred cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc-------------------
Confidence 44577889999998553 3478999999999999999999999875443221111000000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
....+...+++++.+|+.+||+.+|.+|||+.|++.||||
T Consensus 229 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 ------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0011223457899999999999999999999999999997
No 251
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.7e-43 Score=323.25 Aligned_cols=253 Identities=25% Similarity=0.439 Sum_probs=204.7
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|++.+.||+|+||.||+|++..+++.||||.+..... .......+.+|+.+++.++||||+++++++...+..|+|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 579999999999999999999999999999998865332 2233345678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 91 EFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 91 e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
||++ |+|..++.. ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 9999 477766642 334589999999999999999999999999999999999999999999999999987754443
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||..... ...+...+...+.+ +
T Consensus 162 ~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~------------ 227 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP-P------------ 227 (267)
T ss_pred HHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCC-C------------
Confidence 3344567888999999876 5588999999999999999999988865432 22222221111100 0
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.++|.+||..+|++||++.++++
T Consensus 228 ------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 228 ------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred ------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 001134688999999999999999999999986
No 252
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-43 Score=328.03 Aligned_cols=260 Identities=27% Similarity=0.393 Sum_probs=208.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||+||+|.+..+|+.||+|++..... ......+.+|+++++.++||||+++++++.....+|+||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 3689999999999999999999999999999999875432 333456788999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||++| +|...+.+ .+.+++..+..++.+++.||.|||+ +|++||||||+||+++.++.++|+|||++....... .
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--~ 159 (284)
T cd06620 83 EFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--A 159 (284)
T ss_pred ecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--c
Confidence 99995 66666655 4458999999999999999999997 699999999999999999999999999987653222 2
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHH----HHH---HHHHHhCCCCCCCCCCCCC
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID----QLG---KIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~~~---~i~~~~~~~~~~~~~~~~~ 241 (397)
....++..|+|||++.+ ..++.++|+|||||++|+|++|..||....... ... ..........+...+
T Consensus 160 ~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 234 (284)
T cd06620 160 DTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP---- 234 (284)
T ss_pred CccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC----
Confidence 23467888999999876 468899999999999999999999998655421 000 111111000000000
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
...++.++.+||.+||..||.+|||+.|+++|+||...
T Consensus 235 ------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 235 ------------------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred ------------------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 01246789999999999999999999999999999654
No 253
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.6e-43 Score=330.92 Aligned_cols=258 Identities=28% Similarity=0.424 Sum_probs=215.3
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
...+.|...+.||+|+||.||+|++..++..||+|++...... ......+.+|+.+++.++|+|++++++++.++...|
T Consensus 22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAW 101 (317)
T ss_pred CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEE
Confidence 3456689999999999999999999999999999998754322 223345778999999999999999999999999999
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
+||||+.|++.+.+......+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 102 lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 102 LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred EEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 99999999998888766667999999999999999999999999999999999999999999999999998754332
Q ss_pred ccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 168 FTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
....++..|+|||++.. ...++.++|+|||||++|+|++|.+||...+....+..+.......
T Consensus 179 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 243 (317)
T cd06635 179 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT-------------- 243 (317)
T ss_pred -ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--------------
Confidence 23457778999999742 2457889999999999999999999988776555555544321100
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
......+..+++||.+||+.+|.+||++.++++|+|+..
T Consensus 244 ------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 244 ------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 001234788999999999999999999999999999854
No 254
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.5e-43 Score=326.50 Aligned_cols=260 Identities=20% Similarity=0.328 Sum_probs=206.5
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 84 (397)
..++|.+.+.||+|+||.||+|.++. .+..||+|.+..... ......+.+|+.+++.++|+||+++++++....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35789999999999999999997642 345899998764322 122335678999999999999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEee
Q 015948 85 NLHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLAD 154 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~D 154 (397)
..|+||||+. |+|.+++.+.. ..++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence 9999999998 68888886532 2346678899999999999999999999999999999999999999999
Q ss_pred eccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 155 FGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 155 FG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
||+++....... ......++..|+|||.+.+ ..++.++|+|||||++|||++ |.+||.+.+..+....+.....
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-- 239 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-- 239 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--
Confidence 999986533221 1122234566999999876 568899999999999999998 7889988766655544332100
Q ss_pred CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc------CCCCCCCC
Q 015948 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE------HRYFSSAP 298 (397)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~------hp~~~~~~ 298 (397)
.......++.+.+++.+||+.||++|||+.++++ ||||.+..
T Consensus 240 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 240 -------------------------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 0011234689999999999999999999999986 99998754
No 255
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-43 Score=326.56 Aligned_cols=247 Identities=18% Similarity=0.177 Sum_probs=199.8
Q ss_pred cceeee--eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeec----CC
Q 015948 12 DRYLKR--EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPH----KG 84 (397)
Q Consensus 12 ~~y~i~--~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~ 84 (397)
+++... ..||+|++|.||+|.. +|+.||||++........ ....+.+|+.+|++++||||+++++++.+ ..
T Consensus 18 ~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~ 95 (283)
T PHA02988 18 DDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLP 95 (283)
T ss_pred HHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCC
Confidence 334444 6789999999999976 688999999876533221 12456689999999999999999999866 45
Q ss_pred eEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 85 ~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
.+++||||+.| +|.+.+.+. ..+++.....++.+++.||.|||+. +++||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 96 RLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred ceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 78999999995 677777654 4589999999999999999999984 99999999999999999999999999998654
Q ss_pred CCCCcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
... ...+++..|+|||++.+. ..++.++|||||||++|||++|..||.+.+..+....+.......
T Consensus 175 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~---------- 241 (283)
T PHA02988 175 SPP---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSL---------- 241 (283)
T ss_pred ccc---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC----------
Confidence 322 245677889999998652 468999999999999999999999999887666655554321110
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......++++++||.+||+.||++|||++++++
T Consensus 242 ----------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 242 ----------------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ----------------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 011234789999999999999999999999985
No 256
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.7e-43 Score=325.37 Aligned_cols=256 Identities=26% Similarity=0.409 Sum_probs=211.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+-|.+.+.||+|+||.||+|.+..++..||+|.+...... .....+.+|+.+++.++||||++++++|..+..+|+||
T Consensus 3 ~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 35588899999999999999999999999999987644322 22345778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 91 e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||++| +|...+.. ..+++..+..++.|++.|+.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 82 e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 82 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 99985 67766654 3489999999999999999999999999999999999999999999999999987654433334
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||.+.+ ...+.++|+|||||++|+|++|.+||...........+... . .
T Consensus 160 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~---~------------- 218 (277)
T cd06641 160 TFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN----N---P------------- 218 (277)
T ss_pred cccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC----C---C-------------
Confidence 4567888999999865 45788999999999999999999999876554443332111 0 0
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
..+...++.++.++|.+||..+|.+||++.++++||||...
T Consensus 219 -------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 219 -------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred -------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 01122457899999999999999999999999999999764
No 257
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.8e-43 Score=320.44 Aligned_cols=247 Identities=24% Similarity=0.338 Sum_probs=203.0
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
++|++.+.||+|+||.||++..+ .+..+|+|.+..... ....+.+|+.+|+.++||||+++++++...+.+|+|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM---SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc---cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 56999999999999999999875 456899998764322 23457789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc-c
Q 015948 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF-T 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~-~ 169 (397)
|++ |+|.+.+......+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||.++......... .
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 998 68888887655568999999999999999999999999999999999999999999999999998654322211 1
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
...++..|+|||++.+ ..++.++|+|||||++|+|++ |++||...+..+.+..+........
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~---------------- 222 (256)
T cd05114 160 GAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR---------------- 222 (256)
T ss_pred CCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC----------------
Confidence 2233456999999875 568899999999999999999 8999988777666665543211000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
....+..+.+|+.+||..||++||+++++++
T Consensus 223 -----------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 223 -----------PKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -----------CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0123678999999999999999999999985
No 258
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.5e-43 Score=318.32 Aligned_cols=253 Identities=32% Similarity=0.526 Sum_probs=214.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|.+.+.||+|++|.||++.+..+++.|++|.+............+.+|++++++++|+|++++++++.+++..|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 58999999999999999999999999999999976654334455678999999999999999999999999999999999
Q ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 93 ~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
++| +|.+.+... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV 159 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence 985 676666654 569999999999999999999999999999999999999999999999999999876555434455
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
.++..|+|||.+.+ ..++.++|+||||+++|+|++|.+||...+.......+... .
T Consensus 160 ~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---~-------------------- 215 (254)
T cd06627 160 VGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD---D-------------------- 215 (254)
T ss_pred ccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc---C--------------------
Confidence 67888999999876 44889999999999999999999999876654444333211 0
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
.......++..+.++|.+||..+|++|||+.+++.||||
T Consensus 216 ----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 216 ----HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ----CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 011223457899999999999999999999999999997
No 259
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.5e-43 Score=322.31 Aligned_cols=252 Identities=29% Similarity=0.432 Sum_probs=201.7
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHH-HHhcCCCCeeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKL-LKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~-l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
+.||+|+||.||+|.+..+|+.||+|++.+..... .....+..|..+ ...++|+||+++++++..++.+|+|+||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999999999999999987543211 112233445444 4456899999999999999999999999985
Q ss_pred -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 96 -~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
+|..++... ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++..... .....++
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~ 156 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGT 156 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCC
Confidence 777776654 4589999999999999999999999999999999999999999999999999876533 2234567
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
..|+|||.+.+ ..++.++||||||+++|+|++|.+||...+.......+...... ++
T Consensus 157 ~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~----------------- 213 (260)
T cd05611 157 PDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN-----WP----------------- 213 (260)
T ss_pred cCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC-----CC-----------------
Confidence 77999999877 44899999999999999999999999887766555544332100 10
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCC
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPL 299 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~ 299 (397)
......++.++.++|.+||+.||++||+ ++|++.||||.+..|
T Consensus 214 --~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 214 --EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred --CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 0112245899999999999999999995 579999999987544
No 260
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3e-43 Score=320.32 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=197.0
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cC
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TD 96 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~ 96 (397)
+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+++++.++||||+++++++.....+|+||||+. ++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 46999999999999999999999999876432 22233467889999999999999999999999999999999998 57
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc--ccccC
Q 015948 97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT--HQVFA 174 (397)
Q Consensus 97 L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~--~~~~t 174 (397)
|.+++......+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||++........... ....+
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 8888876666689999999999999999999999999999999999999999999999999876533211111 11123
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...+.......+......
T Consensus 160 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~----------------------- 215 (252)
T cd05084 160 VKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL----------------------- 215 (252)
T ss_pred eeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC-----------------------
Confidence 45999999866 458899999999999999997 88988766654443333221100
Q ss_pred CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.+|+.+||..||++|||+.++++
T Consensus 216 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 216 ----PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred ----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011234789999999999999999999999875
No 261
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.8e-43 Score=321.65 Aligned_cols=252 Identities=20% Similarity=0.336 Sum_probs=206.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.++|.+.+.||+|+||+||+|.+..+ ...||+|.+..... ......+.+|+.+++.++|+||+++++.+..++..|
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 36799999999999999999988654 45799998865432 223345778999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+||||+. |+|.+++......+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 9999998 588888877666799999999999999999999999999999999999999999999999999988753222
Q ss_pred ccc--ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 167 RFT--HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 167 ~~~--~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
... ...++..|+|||.+.+ ..++.++|||||||++|+|++ |..||......+....+.......
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 228 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP------------ 228 (266)
T ss_pred ceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC------------
Confidence 222 2233467999999876 568899999999999999997 999997776665554443221100
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.....+..+.+|+.+||+.+|++||++.+++++
T Consensus 229 ---------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 229 ---------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 012347899999999999999999999999864
No 262
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.5e-43 Score=328.95 Aligned_cols=261 Identities=26% Similarity=0.422 Sum_probs=215.3
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
+..-.+.|...+.||+|+||.||+|++..++..+|+|.+...... ......+.+|+.+++.++|+|++++++++.....
T Consensus 10 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 89 (308)
T cd06634 10 KDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89 (308)
T ss_pred cCCcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCe
Confidence 344567799999999999999999999999999999998754322 2223356789999999999999999999999999
Q ss_pred EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
.|+||||+.|++...+......+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 90 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 90 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred eEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9999999999998888766667899999999999999999999999999999999999999999999999998875432
Q ss_pred CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 166 RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
....++..|+|||++.+ ...++.++|||||||++|+|++|..||...+..+....+..... +
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~---------- 232 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---P---------- 232 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC---C----------
Confidence 23456778999999853 24578899999999999999999999877655444433322100 0
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
.......+..+.+||.+||..+|.+||+++++++|+|+...
T Consensus 233 -------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 233 -------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred -------------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 00012347889999999999999999999999999999763
No 263
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.3e-43 Score=325.47 Aligned_cols=262 Identities=31% Similarity=0.480 Sum_probs=219.1
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
....+.|.+.+.||+|+||.||+|.+..++..|++|++..... ....+.+|+.+++.++|+||+++++.+......|
T Consensus 15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence 4467889999999999999999999998999999999875443 3445778999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+|+||++ ++|.+++......++...+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 9999999 588888877654699999999999999999999999999999999999999999999999999876654433
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+..... ..
T Consensus 172 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~----------- 235 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI----PP----------- 235 (286)
T ss_pred hhccccCCcccCCHhHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC----CC-----------
Confidence 3344556778999999876 5689999999999999999999999987766554444322100 00
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
......++.++++||.+||+.+|.+||++.++++|+||....
T Consensus 236 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 236 ----------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred ----------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 001122478999999999999999999999999999998743
No 264
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.6e-43 Score=323.38 Aligned_cols=261 Identities=27% Similarity=0.413 Sum_probs=205.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHLV 89 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~lv 89 (397)
++|+..+.||.|++|.||+|.+..+++.||+|.+...... .....+.+|+++++.++||||++++++|.. .+.+|+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 5799999999999999999999999999999998754332 334567889999999999999999998854 4479999
Q ss_pred EEcccc-CHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 90 FEFMET-DLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 90 ~e~~~g-~L~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|||++| +|.+++. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999984 7766543 234558999999999999999999999999999999999999999999999999987653322
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHHHHhCCCCCCCCCCCC
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-----IDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||..... .+....+.. ......++.
T Consensus 160 --~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~- 231 (287)
T cd06621 160 --AGTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPELKDE- 231 (287)
T ss_pred --cccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhhccC-
Confidence 123456777999999866 5688999999999999999999999986622 222211111 000000000
Q ss_pred CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
...-...++.+.+||.+||..||.+|||+.|+++||||...
T Consensus 232 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 232 ----------------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred ----------------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 00001236789999999999999999999999999999653
No 265
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-46 Score=322.99 Aligned_cols=286 Identities=35% Similarity=0.632 Sum_probs=231.7
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-----eE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NL 86 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----~~ 86 (397)
.+.+-.+.||.|+||+||.+.|..+|+.||+|++....+.-....++++|+++|..++|.|++..+|..+-.. .+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 3455678999999999999999999999999998765554444557889999999999999999988765433 46
Q ss_pred EEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC-C
Q 015948 87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP-D 165 (397)
Q Consensus 87 ~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~-~ 165 (397)
|++.|.+..||...|.... .++.+.++-+++||+.||+|||+.||.||||||.|+|++++..+||||||+|+..... .
T Consensus 133 YV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~ 211 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR 211 (449)
T ss_pred HHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh
Confidence 8899999999988887654 4999999999999999999999999999999999999999999999999999976433 3
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc-
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD- 244 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~- 244 (397)
..++..+-|.+|+|||++.|...|+.++||||+|||+.||+.++-+|...+..+++..|...+|++..+....-..-..
T Consensus 212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~ 291 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN 291 (449)
T ss_pred hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence 5677788899999999999999999999999999999999999999999999999999999999876542210000000
Q ss_pred ccccccccCCCccccCC-----CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFP-----SASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-----~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
-.-..-...|.+..++. ....+..+++..+|..||++|++.++++.|++.....
T Consensus 292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 00000111222222222 1235688999999999999999999999999986554
No 266
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-44 Score=305.45 Aligned_cols=255 Identities=27% Similarity=0.367 Sum_probs=199.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC-----Ce
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----GN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~~ 85 (397)
.+||+|++.||+|||+-||++++..+++.||+|++.-... +....+++|++..++++||||++++++.-.+ ..
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~--~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ--EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccch--HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 6899999999999999999999999999999999976552 3345688999999999999999999886433 35
Q ss_pred EEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 86 LHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
.|++++|.. |+|++.+... +..+++.++..|+.+|++||++||+.. ++||||||.|||+++.+.++|.|||.++
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 999999987 8899888654 346999999999999999999999999 9999999999999999999999999987
Q ss_pred eeCCC-----C----CcccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015948 160 IFGSP-----D----RRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228 (397)
Q Consensus 160 ~~~~~-----~----~~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~ 228 (397)
...-. . ........|..|+|||.+.- ....+.++|||||||+||+|+.|..||... .+.-
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~G 248 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQG 248 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhcC
Confidence 53211 1 01223334667999999743 234688999999999999999999998632 1100
Q ss_pred CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
+.. .+. +.......|. -+.+|..+.+||..||+.||.+||++.+++.+
T Consensus 249 gSl---------aLA--v~n~q~s~P~----~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 249 GSL---------ALA--VQNAQISIPN----SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CeE---------EEe--eeccccccCC----CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 000 000 0000000011 12368999999999999999999999999864
No 267
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-44 Score=316.40 Aligned_cols=281 Identities=35% Similarity=0.559 Sum_probs=232.2
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC----
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---- 84 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---- 84 (397)
.+..||.-+..+|.|+- .|..|.|..+++.||+|++........-..++.+|..++..++|+||++++.+|.-..
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence 35678999999999998 8889999999999999998766544444556789999999999999999999995443
Q ss_pred --eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 85 --NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 85 --~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
.+|+|||||..+|.+.+... ++-..++.+++|+++|++|||+.||+||||||+||++..++.+||.|||+|+..+
T Consensus 93 ~~e~y~v~e~m~~nl~~vi~~e---lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 93 FQEVYLVMELMDANLCQVILME---LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred HHhHHHHHHhhhhHHHHHHHHh---cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence 58999999999999988832 7788999999999999999999999999999999999999999999999998765
Q ss_pred CCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 163 ~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. -..+..+.|++|+|||++.+. +|...+||||+||++.||++|...|.|.+..++..++...+|++.++...++...
T Consensus 170 ~~-~~mtpyVvtRyyrapevil~~-~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 170 TD-FMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred cc-cccCchhheeeccCchheecc-CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 43 467788899999999999884 4999999999999999999999999999999999999999998776544332211
Q ss_pred --------cccccccc------ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 243 --------PDYVEYQY------VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 243 --------~~~~~~~~------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
+.+..+.+ ...+......+.-+..+++|+.+||..||++|.+++++|+|||++
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 11111000 000111111122346789999999999999999999999999997
No 268
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.6e-43 Score=330.79 Aligned_cols=251 Identities=22% Similarity=0.383 Sum_probs=201.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcE----EEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~----~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
..+|++.+.||+|+||+||+|.+..++.. ||+|++.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46799999999999999999998766654 8999886432 222344677899999999999999999998764 57
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
++|+||+. |+|.+.+.+....++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 78999998 78999888766668999999999999999999999999999999999999999999999999998765433
Q ss_pred Ccc--cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 RRF--THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ~~~--~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
... ....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+. ..+...... +
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~-----~------ 230 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGER-----L------ 230 (316)
T ss_pred cceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCC-----C------
Confidence 222 12223557999999976 568999999999999999997 9999987654443 333221100 0
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
...+..+.++.+++.+||..||.+||++.+++.+
T Consensus 231 ---------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 231 ---------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ---------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1112346889999999999999999999999975
No 269
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.6e-43 Score=319.85 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=204.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
...|.+.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.++|+||+++++++..++.+++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 356999999999999999999999999999999976432 12335778999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||++ |+|.+.+.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++..........
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 9997 67888876543 458999999999999999999999999999999999999999999999999998764432211
Q ss_pred c-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 169 T-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 169 ~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
. ...++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+....+......
T Consensus 162 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 224 (263)
T cd05052 162 HAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM---------------- 224 (263)
T ss_pred cCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC----------------
Confidence 1 1223456999999866 568899999999999999998 99999877655544443221100
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++.++.++|.+||..||++||++.++++
T Consensus 225 -----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 225 -----------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred -----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 112345789999999999999999999999876
No 270
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.5e-43 Score=324.79 Aligned_cols=251 Identities=22% Similarity=0.348 Sum_probs=205.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.+...... .....+.+|+++|+.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 4679999999999999999998753 3578999998654322 234567889999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948 86 LHLVFEFME-TDLETVIRNTN-------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~-------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k 151 (397)
.|+||||++ |+|..++...+ ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+|
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence 999999998 57888776532 3478899999999999999999999999999999999999999999
Q ss_pred EeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHh
Q 015948 152 LADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228 (397)
Q Consensus 152 l~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~ 228 (397)
|+|||++........ ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+....
T Consensus 163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~ 241 (280)
T cd05049 163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR 241 (280)
T ss_pred ECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 999999986533221 1223345677999999976 568999999999999999998 999998877666555544221
Q ss_pred CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.. .....++..+.+|+.+||..||.+||++.|+++
T Consensus 242 ~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 242 LL---------------------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred cC---------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 10 111235789999999999999999999999986
No 271
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.3e-43 Score=322.82 Aligned_cols=253 Identities=21% Similarity=0.330 Sum_probs=202.2
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 84 (397)
..++|++.+.||+|+||+||+|.+.. ++..||+|++..... ......+.+|+.+++.++|+||+++++++..+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 57889999999999999999998652 356799998754321 122335778999999999999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEee
Q 015948 85 NLHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLAD 154 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~D 154 (397)
..++||||+. |+|.+++.+.. ..++...+..++.|++.||+|||++|++||||||+|||++.++.++|+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 9999999998 58888876532 1356788899999999999999999999999999999999999999999
Q ss_pred eccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 155 FGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 155 FG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
||+++........ .....++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+.....
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-- 239 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL-- 239 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--
Confidence 9998765332211 112344667999999876 568999999999999999998 7889988766555544432110
Q ss_pred CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
......++..+.++|.+||+.||++|||+.|++++
T Consensus 240 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 240 -------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01112347889999999999999999999999864
No 272
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1e-42 Score=317.78 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=203.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||+||+|.... +..+|+|.+..... ....+.+|+.+++.++||||+++++++.....+|+||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 3579999999999999999997653 45699998764322 2245788999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-c
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-F 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-~ 168 (397)
||+. |+|.+++......+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.++........ .
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 9998 5788888765556899999999999999999999999999999999999999999999999999866433211 1
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
....++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+.......
T Consensus 159 ~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------- 221 (256)
T cd05113 159 VGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY---------------- 221 (256)
T ss_pred CCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC----------------
Confidence 12234456999999976 458899999999999999998 999998777665555543321110
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.....+..+.+++.+||..||.+||++.+++.+
T Consensus 222 -----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 222 -----------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 011237899999999999999999999999864
No 273
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.9e-42 Score=317.42 Aligned_cols=252 Identities=29% Similarity=0.494 Sum_probs=206.0
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||.||+|.+..+|+.||+|.++...... .....+.+|+.++++++|+||++++++|..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 68999999999999999999999999999999987543322 23456778999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 91 EFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 91 e~~~-g~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
||++ |+|..++.. .+..+++..+..++.+|+.||.|||+.|++||||||+||+++.++.++|+|||++..+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 9998 588877754 244589999999999999999999999999999999999999999999999999987654443
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--IDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||..... .+....+.....
T Consensus 162 ~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 225 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--------------- 225 (267)
T ss_pred ccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC---------------
Confidence 3444567888999999876 5688999999999999999999999865431 111111111100
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
++ ...+..+..+.++|.+||..+|++|||+.++++
T Consensus 226 ---------~~--~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 226 ---------PP--LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---------CC--CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00 001144789999999999999999999999875
No 274
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.8e-43 Score=324.17 Aligned_cols=250 Identities=22% Similarity=0.359 Sum_probs=203.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.++|.+.+.||+|+||+||++.+. .++..+|+|.+.... ......+.+|+.++++++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 467999999999999999999753 345679999886432 2223457789999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEE
Q 015948 86 LHLVFEFME-TDLETVIRNTN------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL 152 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl 152 (397)
+|+||||++ |+|.+++.... ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+||
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence 999999998 68888876543 24899999999999999999999999999999999999999999999
Q ss_pred eeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhC
Q 015948 153 ADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFG 229 (397)
Q Consensus 153 ~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~ 229 (397)
+|||+++....... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||...+..+.+..+.....
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~ 240 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 240 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999986543221 1223344667999999876 568999999999999999998 9999988776666555543210
Q ss_pred CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
. ......+.++.+|+.+||+.||.+|||+.+++.
T Consensus 241 ~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 241 L---------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred C---------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0 011234789999999999999999999999864
No 275
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.2e-43 Score=325.47 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=210.2
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
..|.....||+|+||.||++.+..++..||+|++..... .....+.+|+.+++.++|+||+++++.|..+++.|+|||
T Consensus 20 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 20 TYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred HHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch--hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEe
Confidence 344445789999999999999999999999998754322 234457789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|+++ +|...+.. ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++............
T Consensus 98 ~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~ 175 (292)
T cd06657 98 FLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 175 (292)
T ss_pred cCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence 9986 55554433 34899999999999999999999999999999999999999999999999998766443333344
Q ss_pred cccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 015948 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (397)
Q Consensus 171 ~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (397)
..++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.........+..... ..+
T Consensus 176 ~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~-------------- 236 (292)
T cd06657 176 LVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP----PKL-------------- 236 (292)
T ss_pred cccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC----ccc--------------
Confidence 567888999999865 4578899999999999999999999987766555444332211 000
Q ss_pred ccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 251 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
.....++..+.+++.+||+.||.+||++.++++||||.....
T Consensus 237 -------~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 237 -------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred -------CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 111245789999999999999999999999999999987654
No 276
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.8e-43 Score=333.23 Aligned_cols=278 Identities=21% Similarity=0.260 Sum_probs=204.7
Q ss_pred eeeeeec--CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948 17 REVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 17 ~~~LG~G--~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
...||+| +||+||+|++..+|+.||+|++............+.+|+.+++.++||||++++++|..++..|+||||+.
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 3566776 99999999999999999999987654433334567789999999999999999999999999999999998
Q ss_pred -cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-----
Q 015948 95 -TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR----- 167 (397)
Q Consensus 95 -g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~----- 167 (397)
|++..++.+. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++++|||.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 5787777654 234899999999999999999999999999999999999999999999999865433211110
Q ss_pred --ccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 168 --FTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 168 --~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
.....++..|+|||++.+. ..++.++|||||||++|+|++|.+||.+......+...+.... ...+ +....+.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~ 238 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPP---YSPL-DITTFPC 238 (328)
T ss_pred cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCC---CCCc-cccccch
Confidence 0112234559999998753 3478999999999999999999999988765554443332111 0000 0000000
Q ss_pred cc-cc---------------------ccccCCCc-cccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 245 YV-EY---------------------QYVAAPPL-RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 245 ~~-~~---------------------~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
.. .. .......+ .......++.+++||.+||..||++|||+.|+|+||||....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00 00 00000000 011223578899999999999999999999999999997643
No 277
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.1e-43 Score=318.06 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=203.2
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.+|++.+.||+|+||.||+|.+. ++..+|+|.+..... ....+.+|+.+++.++|+||+++++++...+..|+|||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 46899999999999999999875 567899998764322 22356789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc-
Q 015948 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT- 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~- 169 (397)
|++ ++|.+++......+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 997 578888876655789999999999999999999999999999999999999999999999999987643221111
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
...++..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...++.+....+...+..
T Consensus 160 ~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------------------ 220 (256)
T cd05059 160 GTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL------------------ 220 (256)
T ss_pred CCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC------------------
Confidence 1122346999999876 568899999999999999998 89999887766655554332111
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
......+..+.+++.+||..+|++|||+.++++.
T Consensus 221 ---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 221 ---------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 0112347899999999999999999999999864
No 278
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.2e-43 Score=356.98 Aligned_cols=253 Identities=24% Similarity=0.328 Sum_probs=200.6
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|++.+.||+|+||.||+|++..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 6899999999999999999999999999999998754322 223446788999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 91 EFMET-DLETVIRNT----------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 91 e~~~g-~L~~~~~~~----------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
||++| +|.+.+... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||+++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 99984 777776532 1235567788999999999999999999999999999999999999999999998
Q ss_pred eeCCCC------------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015948 160 IFGSPD------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221 (397)
Q Consensus 160 ~~~~~~------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 221 (397)
...... ......+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.........
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 762111 11123468999999999976 56899999999999999999999999875433221
Q ss_pred HHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 222 GKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 222 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
... .. ..+.. ......+++.+.+++.+||..||++|++..+.+.
T Consensus 241 ~~~--~i--~~P~~---------------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 241 YRD--VI--LSPIE---------------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred hhh--hc--cChhh---------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 110 00 00000 0111345789999999999999999988766553
No 279
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.5e-43 Score=324.41 Aligned_cols=253 Identities=32% Similarity=0.508 Sum_probs=213.2
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-cCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv 89 (397)
++|.+.+.||+|+||.||+|.+..+|..||+|++.+... .......+.+|+.+++++. |+||+++++.+.+++..|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 479999999999999999999999999999999876432 2222345678999999998 99999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC---
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--- 165 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--- 165 (397)
|||+. ++|.+.+.+.. .+++..++.++.|++.||.|||++|++|+||+|+||+++.+|.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 99996 68888887654 59999999999999999999999999999999999999999999999999998764432
Q ss_pred -----------------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015948 166 -----------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228 (397)
Q Consensus 166 -----------------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~ 228 (397)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+....+..+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 238 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE 238 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC
Confidence 12223456778999999876 458889999999999999999999999887655554443210
Q ss_pred CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH----HHHhcCCCC
Q 015948 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRYF 294 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~----~e~l~hp~~ 294 (397)
..+...+++.+.+||.+||+.||.+||++ +++++||||
T Consensus 239 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 239 ----------------------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred ----------------------------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 01223447899999999999999999999 999999997
No 280
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.5e-42 Score=316.62 Aligned_cols=254 Identities=26% Similarity=0.462 Sum_probs=206.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNL 86 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~ 86 (397)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++|+||+++++++.+. +.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 579999999999999999999999999999998864321 122234567899999999999999999998653 568
Q ss_pred EEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
++|+||++| +|.+.+...+ .+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||+++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 999999985 7777776544 48999999999999999999999999999999999999999999999999998653211
Q ss_pred ---CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ---~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||..........++. .....
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~--------- 227 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---TQPTK--------- 227 (264)
T ss_pred ccCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH---cCCCC---------
Confidence 12233557888999999976 557899999999999999999999998765444333322 11111
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
..+...+++.+.++|.+||+ +|.+||++.+++.|||.
T Consensus 228 --------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 228 --------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred --------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 12234568999999999999 57999999999999984
No 281
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.7e-43 Score=320.04 Aligned_cols=249 Identities=21% Similarity=0.346 Sum_probs=207.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||+||+|.+.. +..+|+|++..... .....+.+|+.+++.++|+||+++++++.+....|+||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 4679999999999999999999887 88999999865432 12335678999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||++ |+|.+++.+. +..++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~ 161 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS 161 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence 9998 5888888764 3458999999999999999999999999999999999999999999999999998765433333
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+......
T Consensus 162 ~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------- 223 (261)
T cd05148 162 SDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM----------------- 223 (261)
T ss_pred cCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC-----------------
Confidence 33345567999999866 568899999999999999998 89999887766666655432111
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......++++.++|.+||+.||.+|||+.++++
T Consensus 224 ----------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 ----------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 111345789999999999999999999999875
No 282
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.2e-44 Score=335.99 Aligned_cols=287 Identities=32% Similarity=0.531 Sum_probs=230.0
Q ss_pred cccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC------CCeeEEE
Q 015948 4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS------PHIIELI 77 (397)
Q Consensus 4 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~l~ 77 (397)
+.++..|-.+|.+....|+|-|++|..|.+...|..||||+|+... ..+..-++|+.||++|+. -|.++|+
T Consensus 424 v~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 424 VRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---VMHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred EehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---HHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 3567788999999999999999999999999999999999998543 233345689999999953 5889999
Q ss_pred eeeecCCeEEEEEEccccCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEee
Q 015948 78 DAFPHKGNLHLVFEFMETDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLAD 154 (397)
Q Consensus 78 ~~~~~~~~~~lv~e~~~g~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~D 154 (397)
-.|.+..++|||||.+.-+|...+++. +..|....++.|++||+.||..|..+||+|.||||+|||+++. ..+||||
T Consensus 501 r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred HHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence 999999999999999999999999875 3458889999999999999999999999999999999999976 4599999
Q ss_pred eccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948 155 FGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (397)
Q Consensus 155 FG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 234 (397)
||.|...+.. ..+.++.+++|+|||+++| ..|++..|+||+||+||||.||+.+|+|.++-+.+...+..-|..+..
T Consensus 581 fGSA~~~~en--eitPYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K 657 (752)
T KOG0670|consen 581 FGSASFASEN--EITPYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK 657 (752)
T ss_pred Cccccccccc--cccHHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence 9999876543 4556677888999999998 679999999999999999999999999999999999888877754432
Q ss_pred CCCCCC----CCcc-----ccccccccC----------CCcccc------CCCC-------CHHHHHHHHHhcCcCCCCC
Q 015948 235 QWPDLA----YLPD-----YVEYQYVAA----------PPLRSL------FPSA-------SDDALDLLSKMFTYDPKAR 282 (397)
Q Consensus 235 ~~~~~~----~~~~-----~~~~~~~~~----------~~~~~~------~~~~-------s~~~~~li~~~L~~dP~~R 282 (397)
-.-.-. .+.. +.+...+.. .|.+.+ .+.+ -..+++||.+||..||++|
T Consensus 658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR 737 (752)
T KOG0670|consen 658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR 737 (752)
T ss_pred HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence 111000 0000 000000000 010000 0112 2457899999999999999
Q ss_pred CCHHHHhcCCCCCC
Q 015948 283 ITAQQALEHRYFSS 296 (397)
Q Consensus 283 ~t~~e~l~hp~~~~ 296 (397)
.|+.|+|.||||+.
T Consensus 738 it~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 738 ITVNQALKHPFITE 751 (752)
T ss_pred CCHHHHhcCCcccC
Confidence 99999999999974
No 283
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.2e-43 Score=332.99 Aligned_cols=253 Identities=23% Similarity=0.371 Sum_probs=199.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec-C
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH-K 83 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~-~ 83 (397)
.++|++.+.||.|+||.||+|.+.. +++.||+|+++..... .....+.+|+.+++++ +|+||+++++++.. +
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA-SEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH-HHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 4689999999999999999997533 4578999998643321 2233567899999999 89999999998754 4
Q ss_pred CeEEEEEEccc-cCHHHHHHhcC---------------------------------------------------------
Q 015948 84 GNLHLVFEFME-TDLETVIRNTN--------------------------------------------------------- 105 (397)
Q Consensus 84 ~~~~lv~e~~~-g~L~~~~~~~~--------------------------------------------------------- 105 (397)
..++++|||+. |+|.+.+....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 67899999998 57877775421
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccCceeeCh
Q 015948 106 ---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAP 180 (397)
Q Consensus 106 ---~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aP 180 (397)
..++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+..... ......++..|+||
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 2578899999999999999999999999999999999999999999999999987633221 12233445679999
Q ss_pred hcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcccc
Q 015948 181 ELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSL 259 (397)
Q Consensus 181 E~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (397)
|++.+ ..++.++|||||||++|||++ |.+||.+....+.+...+..... ...
T Consensus 245 E~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--------------------------~~~ 297 (337)
T cd05054 245 ESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR--------------------------MRA 297 (337)
T ss_pred HHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC--------------------------CCC
Confidence 99977 568999999999999999997 99999876544444333221000 001
Q ss_pred CCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 260 FPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 260 ~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
....++++.+++.+||+.+|++||++.|+++|
T Consensus 298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12347899999999999999999999999875
No 284
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-42 Score=316.90 Aligned_cols=252 Identities=27% Similarity=0.452 Sum_probs=212.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
+|++.+.||.|+||.||++.+..+++.||+|.+............+.+|+.+++.++|+||+++++.+.+....|+||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 58999999999999999999999999999999976554444455677899999999999999999999999999999999
Q ss_pred ccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 93 MET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 93 ~~g-~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
++| +|...+... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~ 158 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MA 158 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--Cc
Confidence 984 787777552 345899999999999999999999999999999999999999999999999999876543 23
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
....++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...+.......+.... +
T Consensus 159 ~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------~------------ 218 (256)
T cd08530 159 KTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-------Y------------ 218 (256)
T ss_pred ccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------C------------
Confidence 34567788999999976 568889999999999999999999998876554433332110 0
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
......++.+++++|.+||..+|.+||++.++++||++
T Consensus 219 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 219 --------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred --------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 01112447899999999999999999999999999974
No 285
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.2e-42 Score=312.41 Aligned_cols=252 Identities=32% Similarity=0.508 Sum_probs=210.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
.|.+.+.||+|++|.||++.+..++..+++|++..... .....+.+|+.+++.++|+||+++++.+..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 48899999999999999999998999999999876443 2344677899999999999999999999999999999999
Q ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 93 ME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 93 ~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
++ ++|.+.+......+++..+..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+........ ....
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~ 157 (253)
T cd05122 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTM 157 (253)
T ss_pred CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccce
Confidence 99 577777776645699999999999999999999999999999999999999999999999999987654432 3445
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
.++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+....+..+... .....+
T Consensus 158 ~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~-------------- 218 (253)
T cd05122 158 VGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN----GPPGLR-------------- 218 (253)
T ss_pred ecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc----CCCCcC--------------
Confidence 67778999999876 44889999999999999999999999876544444333221 000000
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCC
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRY 293 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 293 (397)
....++..+.++|.+||+.||++|||+.++++|||
T Consensus 219 -------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 219 -------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00113788999999999999999999999999998
No 286
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.4e-43 Score=328.25 Aligned_cols=275 Identities=20% Similarity=0.219 Sum_probs=201.0
Q ss_pred CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHHH
Q 015948 24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIR 102 (397)
Q Consensus 24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~ 102 (397)
++|.||.+++..+++.||||++............+.+|+.+++.++|+||++++++|..++..|++|||++ |+|..++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 44566777777899999999998654444445568899999999999999999999999999999999999 57777776
Q ss_pred hc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-------cccccccC
Q 015948 103 NT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-------RFTHQVFA 174 (397)
Q Consensus 103 ~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-------~~~~~~~t 174 (397)
.. ...+++..+..++.||+.||.|||++||+||||||+||+++.+|.+||+|||.+........ ......++
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN 171 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccc
Confidence 53 34589999999999999999999999999999999999999999999999999876532221 12234456
Q ss_pred ceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC--CCCCCCCCCCccc----cc
Q 015948 175 RWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT--PSQWPDLAYLPDY----VE 247 (397)
Q Consensus 175 ~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~----~~ 247 (397)
..|+|||++.+. ..++.++|+|||||++|+|++|..||........+........... ...++........ ..
T Consensus 172 ~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
T cd08216 172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNE 251 (314)
T ss_pred ccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccccc
Confidence 779999998653 3588999999999999999999999987655443322221110000 0000000000000 00
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
...............++.++.+|+.+||..||++|||++++|+||||....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 252 HPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred ccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 000000011112223467899999999999999999999999999997543
No 287
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.1e-42 Score=319.95 Aligned_cols=250 Identities=22% Similarity=0.286 Sum_probs=199.4
Q ss_pred eeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe-----
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN----- 85 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~----- 85 (397)
|.+.+.||+|+||.||+|....+ +..||+|.+............+.+|+.+++.++|+||+++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 67889999999999999987643 4789999987544333333467789999999999999999998755443
Q ss_pred -EEEEEEccc-cCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948 86 -LHLVFEFME-TDLETVIRNT-----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 86 -~~lv~e~~~-g~L~~~~~~~-----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a 158 (397)
.++||||+. |+|...+... ...+++..+..++.||+.||.|||++|++||||||+||++++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 899999998 5777776442 235899999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCccc--ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948 159 RIFGSPDRRFT--HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (397)
Q Consensus 159 ~~~~~~~~~~~--~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 235 (397)
+.......... ...++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 233 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR------ 233 (273)
T ss_pred eeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------
Confidence 87643322111 1223456999999865 568999999999999999998 8899988776665544432110
Q ss_pred CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.......+.++.+++.+||+.||.+|||+.|++++
T Consensus 234 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 234 ---------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ---------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01123457899999999999999999999999864
No 288
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-42 Score=322.92 Aligned_cols=264 Identities=24% Similarity=0.390 Sum_probs=210.4
Q ss_pred ceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 86 (397)
.|++.+.||+|+||.||+|++. .+|..||+|++...... ......+.+|+.+++.+ +|+||+++++.|+.+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999874 47899999998754322 22234567899999999 589999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+||||++ ++|...+... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 99999999 5787777654 458999999999999999999999999999999999999999999999999998764332
Q ss_pred C-cccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 166 R-RFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 166 ~-~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
. ......++..|+|||.+.+. ..++.++|||||||++|+|++|..||...........+........+
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 229 (290)
T cd05613 160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP---------- 229 (290)
T ss_pred ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC----------
Confidence 1 22345678889999998653 34678999999999999999999999754433222222222111100
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC-----CHHHHhcCCCCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~~~~~~ 301 (397)
.....++..+.+|+.+||+.||++|+ ++++++.||||....+..
T Consensus 230 --------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~ 278 (290)
T cd05613 230 --------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDD 278 (290)
T ss_pred --------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHH
Confidence 11123578999999999999999997 899999999998876533
No 289
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.3e-42 Score=312.81 Aligned_cols=255 Identities=29% Similarity=0.531 Sum_probs=212.0
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--CeEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHLVF 90 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~lv~ 90 (397)
+|.+.+.||+|++|.||+|.+..+++.|++|++............+.+|+.++++++|+||+++++.+... ..+++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 58899999999999999999999999999999876654334455678899999999999999999999888 8999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--c
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--R 167 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~ 167 (397)
||+. ++|.+++.+.. .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 9996 57777776654 699999999999999999999999999999999999999999999999999988755432 1
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||....+... .+.....
T Consensus 160 ~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~------------------ 218 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGS------------------ 218 (260)
T ss_pred ccCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccc------------------
Confidence 344567778999999876 4488999999999999999999999987762221 1111100
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
......+...++..+.+||.+||..||.+||++.+++.||||
T Consensus 219 -----~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 -----SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -----cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 001112223447899999999999999999999999999997
No 290
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.9e-42 Score=316.72 Aligned_cols=248 Identities=20% Similarity=0.343 Sum_probs=203.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.++||+|+||.||+|.+. .+..||+|.+..... ....+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 578999999999999999999864 567799998754322 2346778999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (397)
Q Consensus 91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~- 167 (397)
||+. |+|.+++... ...++...+..++.||+.||+|||++|++||||||+||+++.++.++|+|||++.........
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 9997 6888887653 455889999999999999999999999999999999999999999999999999876443221
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+....+......
T Consensus 161 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 223 (261)
T cd05072 161 REGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM---------------- 223 (261)
T ss_pred cCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 122234567999999876 558889999999999999998 99999887766655554322110
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++.++.+++.+||..+|++||+++++++
T Consensus 224 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 224 -----------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111235789999999999999999999999875
No 291
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1e-42 Score=319.41 Aligned_cols=254 Identities=25% Similarity=0.450 Sum_probs=204.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
++|.+.+.||+|+||.||+|++..++..||||.+...... ......+.+|+.+++.++|+||++++++|..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 5799999999999999999999999999999988754322 223345778999999999999999999999999999999
Q ss_pred Ecccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 91 EFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 91 e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
||++| +|.+++.. ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 99985 77777653 244589999999999999999999999999999999999999999999999999987654443
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+..... ..+...+.... ++
T Consensus 162 ~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~---~~--------- 226 (267)
T cd08229 162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL--YSLCKKIEQCD---YP--------- 226 (267)
T ss_pred ccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchH--HHHhhhhhcCC---CC---------
Confidence 3344567888999999866 568889999999999999999999987553221 11111111000 00
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
+ ......+..+.+||.+||..||.+|||+.++++
T Consensus 227 --------~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 227 --------P--LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred --------C--CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 0 001234789999999999999999999998765
No 292
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.9e-42 Score=315.90 Aligned_cols=245 Identities=28% Similarity=0.428 Sum_probs=205.7
Q ss_pred eeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948 18 EVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
+.||+|+||.||+|.+... +..|++|.+....... ....+.+|+.+++.++|+||+++++++..+..+++||||+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 4799999999999998866 8899999987654433 34567789999999999999999999999999999999996
Q ss_pred -cCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 95 -TDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 95 -g~L~~~~~~~--------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+|.+.+... ...+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+.......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 6888888776 4679999999999999999999999999999999999999999999999999998765432
Q ss_pred --CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 --RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 --~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------- 225 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR------------- 225 (262)
T ss_pred ccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------
Confidence 22334556778999999876 468999999999999999998 6999988876665555433100
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
......++.++.+++.+||..||++||++.|++++
T Consensus 226 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 226 --------------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred --------------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 01123447899999999999999999999999875
No 293
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.3e-43 Score=319.82 Aligned_cols=251 Identities=32% Similarity=0.546 Sum_probs=207.3
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-CH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL 97 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-~L 97 (397)
||.|+||.||+|++..+|+.|++|++...... ......+.+|+.++++++|+||+++++.+..+...|+|+||+.| +|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999999999999998654321 23344677899999999999999999999999999999999985 77
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--------ccc
Q 015948 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--------RFT 169 (397)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--------~~~ 169 (397)
..++.+.+ .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........ ...
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK 159 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence 77776644 689999999999999999999999999999999999999999999999999876543311 233
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...++..|+|||.+.+ ..++.++|+|||||++|+|++|..||......+....+... . ..++.
T Consensus 160 ~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~---~~~~~----------- 222 (265)
T cd05579 160 RIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG--K---IEWPE----------- 222 (265)
T ss_pred CcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--C---cCCCc-----------
Confidence 4556778999999876 44889999999999999999999999877766555444321 0 01110
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH---HHHhcCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA---QQALEHRYFSSAP 298 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~---~e~l~hp~~~~~~ 298 (397)
...++..+.+||.+||+.+|++|||+ .++++||||++..
T Consensus 223 ----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 223 ----------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred ----------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 01137899999999999999999999 9999999998654
No 294
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.2e-42 Score=324.42 Aligned_cols=250 Identities=24% Similarity=0.343 Sum_probs=199.9
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCc--EEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l 88 (397)
++|.+.+.||+|+||.||+|++..++. .+++|.+.... .......+.+|+.++.++ +||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 689999999999999999999877765 46888775322 122234577899999999 79999999999999999999
Q ss_pred EEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEE
Q 015948 89 VFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL 152 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl 152 (397)
||||++ |+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence 999998 68888886532 24888999999999999999999999999999999999999999999
Q ss_pred eeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 153 ADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 153 ~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
+|||++....... .......+..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+....+......
T Consensus 161 ~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~- 237 (297)
T cd05089 161 ADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM- 237 (297)
T ss_pred CCcCCCcccccee-ccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-
Confidence 9999986432111 1111222445999999866 568999999999999999997 99999887766555444221110
Q ss_pred CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.....++.++.+||.+||..+|.+||+++++++.
T Consensus 238 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 238 --------------------------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred --------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1112457899999999999999999999999764
No 295
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=9.4e-43 Score=318.52 Aligned_cols=253 Identities=26% Similarity=0.447 Sum_probs=206.7
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
+|.+.+.||+|+||+||++.+..++..+++|+++.... .......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 69999999999999999999988877787777654332 222333466799999999999999999999999999999
Q ss_pred EEcccc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 90 FEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|||+.+ +|...+.. ....+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999985 77766653 3456899999999999999999999999999999999999975 679999999998765444
Q ss_pred CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
.......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||.+.+.......+.... .
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~------------- 222 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP---T------------- 222 (260)
T ss_pred ccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC---C-------------
Confidence 44444567788999999865 557889999999999999999999998766555444433210 0
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
......++.++.++|.+||..||++||++.++++||||
T Consensus 223 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 223 -----------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -----------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 01122457899999999999999999999999999997
No 296
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-44 Score=341.25 Aligned_cols=255 Identities=26% Similarity=0.442 Sum_probs=210.5
Q ss_pred hcce-eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC--ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe--
Q 015948 11 ADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-- 85 (397)
Q Consensus 11 ~~~y-~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~-- 85 (397)
.+|| +...+||+|+|-+||+|.|..+|..||.-.++... +.+...+++..|+.+|+.|+|||||++|++|.+...
T Consensus 38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence 4566 55788999999999999999999999977665443 334445788899999999999999999999987655
Q ss_pred EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccC-CcEEEeeeccceee
Q 015948 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSH-GQLKLADFGLARIF 161 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~ 161 (397)
+.+|+|++. |+|..++++. +.++...++.|++||++||.|||++. |||||||-+||+|+.+ |.|||+|+|+|+..
T Consensus 118 in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred eeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 889999998 6676666654 45899999999999999999999996 9999999999999864 89999999999987
Q ss_pred CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCC
Q 015948 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
.. ....+.+|||.|||||+.. ..|+..+||||||.++.||+|+..|+..=.+ .+++.++..+.....
T Consensus 197 r~--s~aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s-------- 264 (632)
T KOG0584|consen 197 RK--SHAKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA-------- 264 (632)
T ss_pred hc--cccceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH--------
Confidence 44 3345589999999999985 5799999999999999999999998865444 445555544322111
Q ss_pred CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
+..--.+++++||.+||.. .+.|+|+.|+|.||||...
T Consensus 265 ------------------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 265 ------------------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ------------------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 1111268999999999999 9999999999999999864
No 297
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=328.61 Aligned_cols=265 Identities=29% Similarity=0.483 Sum_probs=215.6
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-----ccCCccchHHHHHHHHHhcCCCCeeEEEeeee
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-----QKEGVNFTALREIKLLKELKSPHIIELIDAFP 81 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~ 81 (397)
...|.++|.++..||+|||+.||+|.|....++||||+-...+ .++.....+.+|..|.+.|.||-||++||+|.
T Consensus 458 HptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs 537 (775)
T KOG1151|consen 458 HPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS 537 (775)
T ss_pred CcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee
Confidence 3458999999999999999999999999999999999865543 23344556789999999999999999999995
Q ss_pred -cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccC---CcEEEeee
Q 015948 82 -HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSH---GQLKLADF 155 (397)
Q Consensus 82 -~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~---~~~kl~DF 155 (397)
+.+.+|-|+|||+|+-++++.+++..+++.+++.|+.||+.||.||.... |||-||||.|||+... |.+||+||
T Consensus 538 lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 45678999999999766666677778999999999999999999999775 9999999999999643 78999999
Q ss_pred ccceeeCCCCC-------cccccccCceeeChhcccC---ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHH--H
Q 015948 156 GLARIFGSPDR-------RFTHQVFARWYRAPELLFG---AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQL--G 222 (397)
Q Consensus 156 G~a~~~~~~~~-------~~~~~~~t~~y~aPE~l~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~--~ 222 (397)
|+++++..... ......||.||++||.+.- ....+.++||||+|||||.++.|+.||..+.. .+++ .
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 99998765432 2345668999999999743 23468999999999999999999999976532 2222 1
Q ss_pred HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.|++. ..+..|+ -|.+|.++++||++||++--++|....++-.||||..
T Consensus 698 TIlkA---------------------tEVqFP~----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 698 TILKA---------------------TEVQFPP----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred chhcc---------------------eeccCCC----CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 22221 1111111 1456999999999999999999999999999999853
No 298
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.1e-42 Score=325.46 Aligned_cols=251 Identities=25% Similarity=0.361 Sum_probs=199.2
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcE--EEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT--VAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~ 87 (397)
.++|.+.+.||+|+||.||+|.+..++.. +|+|.+.... .......+.+|+.++.++ +|+||+++++++.+++.+|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 56899999999999999999998877765 4666654321 122334567899999999 8999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948 88 LVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k 151 (397)
+||||++ |+|.+++.+.. ..+++..++.++.||+.||+|||++|++||||||+|||++.++.+|
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEE
Confidence 9999998 68888886542 2478999999999999999999999999999999999999999999
Q ss_pred EeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCC
Q 015948 152 LADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230 (397)
Q Consensus 152 l~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~ 230 (397)
|+|||++....... ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.....
T Consensus 165 l~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~- 241 (303)
T cd05088 165 IADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR- 241 (303)
T ss_pred eCccccCcccchhh-hcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCc-
Confidence 99999986432111 1111223456999998865 568899999999999999998 9999987766554443311100
Q ss_pred CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
+ ......+.++.+||.+||+.+|++||++++++.+
T Consensus 242 -----~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 242 -----L---------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred -----C---------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0111347899999999999999999999999875
No 299
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2e-42 Score=334.49 Aligned_cols=252 Identities=21% Similarity=0.320 Sum_probs=199.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~ 84 (397)
.++|++.+.||+|+||.||+|.+... +..||||++..... ......+.+|+++|+.+. ||||+++++++.+.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 56888999999999999999987433 34799999865432 223346788999999996 999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948 85 NLHLVFEFME-TDLETVIRNTN---------------------------------------------------------- 105 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~---------------------------------------------------------- 105 (397)
.+|+|||||. |+|.+++.+..
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999998 68887775421
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC
Q 015948 106 -------------------------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG 148 (397)
Q Consensus 106 -------------------------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~ 148 (397)
..+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence 2377888899999999999999999999999999999999999
Q ss_pred cEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015948 149 QLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIF 225 (397)
Q Consensus 149 ~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~ 225 (397)
.+||+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||........+....
T Consensus 275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~ 353 (400)
T cd05105 275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI 353 (400)
T ss_pred EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence 999999999987643221 1223345667999999876 568999999999999999996 888887654433332222
Q ss_pred HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.... . ......++.++.+++.+||+.||++||++.++.+
T Consensus 354 ~~~~--~------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 354 KSGY--R------------------------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred hcCC--C------------------------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 2100 0 0011245789999999999999999999988865
No 300
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.2e-42 Score=315.59 Aligned_cols=247 Identities=23% Similarity=0.384 Sum_probs=200.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||+||+|.+..+ ..||+|++..... ....+.+|+++++.++|+||+++++.+. ....|+||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence 47899999999999999999988655 4699999875332 2235778999999999999999999875 45689999
Q ss_pred Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||++ |+|.+++.+. ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.++.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 9998 5888888753 3458899999999999999999999999999999999999999999999999998764433222
Q ss_pred -cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 169 -THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 169 -~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+....+....+......
T Consensus 160 ~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------------- 222 (262)
T cd05071 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------------- 222 (262)
T ss_pred ccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC----------------
Confidence 12334567999999865 558999999999999999999 88999887766655544321100
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++..+.+||.+||+.||++||+++++++
T Consensus 223 -----------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 223 -----------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -----------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 011234788999999999999999999999875
No 301
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.9e-42 Score=320.71 Aligned_cols=251 Identities=20% Similarity=0.314 Sum_probs=202.0
Q ss_pred cceeeeeeeeecCcEEEEEEEEC----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
+.|++.+.||+|+||+||+|... .++..+|+|.+..... ......+.+|+.+++.++||||+++++++..+...|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 57999999999999999999853 3557899999864322 122245678999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948 88 LVFEFME-TDLETVIRNTN----------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~----------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~ 150 (397)
+||||+. |+|..++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~ 163 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHV 163 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcE
Confidence 9999998 58888775321 237888899999999999999999999999999999999999999
Q ss_pred EEeeeccceeeCCCC--CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948 151 KLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA 227 (397)
Q Consensus 151 kl~DFG~a~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~ 227 (397)
||+|||+++...... .......++..|+|||++.+ ..++.++|+|||||++|||++ |.+||.+.+.......+...
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998754322 11223344567999999876 458999999999999999998 99999887665554444321
Q ss_pred hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.. ......+++.+.+++.+||+.||.+||++.+++++
T Consensus 243 ~~---------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 243 QL---------------------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred Cc---------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 00 01122457899999999999999999999999864
No 302
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.6e-42 Score=355.24 Aligned_cols=148 Identities=24% Similarity=0.468 Sum_probs=131.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc-CCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
.++|.+.+.||+|+||+||+|++..+++.||||+++..... ......+.+|+.+++.++|+||+++++.+....++|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 57899999999999999999999999999999999754322 22234567899999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
|||+. |+|..++... ..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99997 5788777654 358999999999999999999999999999999999999999999999999875
No 303
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.5e-44 Score=358.34 Aligned_cols=258 Identities=29% Similarity=0.471 Sum_probs=205.4
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--------
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-------- 81 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-------- 81 (397)
...+|+.++.||+||||.||+++++-+|+.||||+|.... .......+++|+.+|.+|+|||||+++.+|.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 4667899999999999999999999999999999998776 5556677899999999999999999885430
Q ss_pred ----------------------------------------------------------------------cC--------
Q 015948 82 ----------------------------------------------------------------------HK-------- 83 (397)
Q Consensus 82 ----------------------------------------------------------------------~~-------- 83 (397)
+.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 00
Q ss_pred ---------------------------------CeEEEEEEccccCHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHhHh
Q 015948 84 ---------------------------------GNLHLVFEFMETDLETVIRNTNIFL-SPADIKSYMQMTLKGLAFCHK 129 (397)
Q Consensus 84 ---------------------------------~~~~lv~e~~~g~L~~~~~~~~~~l-~~~~~~~~~~qil~aL~~lH~ 129 (397)
..+||-||||+..++..+...+... ....++.++++|++||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 1378999999988888777766544 578899999999999999999
Q ss_pred CCccccCCCCCcEEEccCCcEEEeeeccceee------------------CCCCCcccccccCceeeChhcccCcc--CC
Q 015948 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF------------------GSPDRRFTHQVFARWYRAPELLFGAK--QY 189 (397)
Q Consensus 130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~------------------~~~~~~~~~~~~t~~y~aPE~l~~~~--~~ 189 (397)
+|||||||||.||++++++.|||+|||+|+.. +......+..+||..|+|||++.+.. .|
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 99999999999999999999999999999861 11223567889999999999997766 69
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHH
Q 015948 190 GAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL 268 (397)
Q Consensus 190 ~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 268 (397)
+.++||||||+|||||+.- |... .....+..+.... .|.. + .++..--+.-.
T Consensus 796 n~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR~g~---iP~~-~--------------------~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLRKGS---IPEP-A--------------------DFFDPEHPEEA 848 (1351)
T ss_pred cchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcccCC---CCCC-c--------------------ccccccchHHH
Confidence 9999999999999999843 4332 2333333322110 0000 0 11111135677
Q ss_pred HHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 269 DLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 269 ~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
.+|..||+.||.+||||.|+|.+.||-
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 899999999999999999999999985
No 304
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5e-44 Score=338.09 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=209.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
..+...+.+.||+|.||+||+|++- ..||||++..........+.|++|+..+++-+|.||+=+.+++...+. .||
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred CHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 4567889999999999999999775 359999998877766677789999999999999999999999988877 999
Q ss_pred EEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC--CCC
Q 015948 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS--PDR 166 (397)
Q Consensus 90 ~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~--~~~ 166 (397)
..+|+| +|+.+++.....|.....+.|++||++|+.|||.++|||||||..||++.+++.|||+|||++..-.. ...
T Consensus 466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~ 545 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ 545 (678)
T ss_pred ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence 999998 78888888888899999999999999999999999999999999999999999999999999975322 223
Q ss_pred cccccccCceeeChhcccC--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
......|...|||||++.. ..+|+..+|||||||++|||++|..||........+..+ |..
T Consensus 546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV----GrG------------- 608 (678)
T KOG0193|consen 546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV----GRG------------- 608 (678)
T ss_pred ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe----ccc-------------
Confidence 3444455667999999853 346899999999999999999999999844433322221 111
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
+..+.........+.++++|+..|+.+++++||...+||.
T Consensus 609 ------~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 609 ------YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ------ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 1122233344455789999999999999999999999986
No 305
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.2e-42 Score=319.56 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=201.2
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
..++|++.+.||+|+||+||+|.+..++. .||+|++..... ......+.+|+.+++.++|+||+++++++.. ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST 82 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence 36789999999999999999999877776 489998864322 2223457789999999999999999999865 45
Q ss_pred EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
.++++||++ |+|.+.+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 789999998 7898888776667999999999999999999999999999999999999999999999999999876433
Q ss_pred CCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 165 DRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 165 ~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
... .....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||...........+... ...
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~---------- 230 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-ERL---------- 230 (279)
T ss_pred cceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CcC----------
Confidence 221 112233566999999876 568999999999999999998 89999766554433322211 000
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
...+..+.++.++|.+||..||++||++.+++.
T Consensus 231 ----------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 231 ----------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ----------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111234789999999999999999999999985
No 306
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-42 Score=324.00 Aligned_cols=252 Identities=25% Similarity=0.360 Sum_probs=201.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC-------CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~ 82 (397)
.++|.+.+.||+|+||.||+|++.. ++..+|+|.+..... ......+.+|+.+++.+ +|+||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 5889999999999999999998643 235799999875422 22234577899999999 79999999999999
Q ss_pred CCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948 83 KGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (397)
Q Consensus 83 ~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~ 146 (397)
++..|+||||++ |+|.+++.... ..++...+..++.||+.||+|||++|++||||||+|||++.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 175 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 175 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence 999999999998 68888887642 24788999999999999999999999999999999999999
Q ss_pred CCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948 147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (397)
Q Consensus 147 ~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~ 223 (397)
++.+||+|||+++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+....+....
T Consensus 176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~ 254 (307)
T cd05098 176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 254 (307)
T ss_pred CCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 999999999999765432211 112223456999999876 558899999999999999998 8899977654443333
Q ss_pred HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
+.... . ......++.++.+||.+||..+|.+||++.+++++
T Consensus 255 ~~~~~----~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 255 LKEGH----R-----------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHcCC----C-----------------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 32110 0 01122457899999999999999999999999864
No 307
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-42 Score=319.71 Aligned_cols=253 Identities=20% Similarity=0.296 Sum_probs=202.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 84 (397)
-.++|.+.+.||+|+||.||+|.+.. ++..||+|.+..... ......+.+|+.+++.++|+||+++++++.+.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 35789999999999999999999876 678899998754322 122345778999999999999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC---cEEEee
Q 015948 85 NLHLVFEFME-TDLETVIRNTN------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLAD 154 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~---~~kl~D 154 (397)
..|+||||+. |+|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999997 58888876643 2488999999999999999999999999999999999998765 599999
Q ss_pred eccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 155 FGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 155 FG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
||+++........ ......+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+....
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--- 238 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG--- 238 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC---
Confidence 9999876322211 112223456999999976 458999999999999999996 999998776655444332210
Q ss_pred CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
. + .....++..+.+++.+||+.||++||++.++++|
T Consensus 239 ~---~---------------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 239 R---L---------------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred c---C---------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 0 1123457899999999999999999999999986
No 308
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.4e-42 Score=322.15 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=209.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv 89 (397)
.++|.+.+.||+|+||.||+|.+..+++.||||.+....... ....+.+|+.++..+ .|+||+++++++..+..+|+|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 578999999999999999999999899999999987543222 233456677766666 499999999999999999999
Q ss_pred EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
|||+++.+..++......+++..+..++.||+.||.|||+ +||+||||+|+||+++.++.+||+|||++..+..... .
T Consensus 93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-~ 171 (296)
T cd06618 93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-K 171 (296)
T ss_pred eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-c
Confidence 9999998888877766679999999999999999999997 5999999999999999999999999999976643322 2
Q ss_pred cccccCceeeChhcccCc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 169 THQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
....++..|+|||.+.+. ..++.++|||||||++|+|++|+.||..... .+.+..+..... ..++
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~------- 240 (296)
T cd06618 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP----PSLP------- 240 (296)
T ss_pred cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC----CCCC-------
Confidence 234567789999998653 2478899999999999999999999976432 333433322110 0000
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
....++.++.+||.+||..||.+||++++++.|+||..
T Consensus 241 --------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 241 --------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred --------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 00134788999999999999999999999999999975
No 309
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.8e-42 Score=316.35 Aligned_cols=242 Identities=22% Similarity=0.354 Sum_probs=195.0
Q ss_pred eeeecCcEEEEEEEE--CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-c
Q 015948 19 VLGEGTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-T 95 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g 95 (397)
.||+|+||.||+|.+ ..++..+|+|++............+.+|+.+++.+.|+||+++++++. ....++||||++ |
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999964 457789999998655433334456778999999999999999999885 456799999999 5
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc---ccccc
Q 015948 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FTHQV 172 (397)
Q Consensus 96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~---~~~~~ 172 (397)
+|..++... ..+++..+..++.||+.||+|||++||+||||||.||+++.++.+||+|||++......... .....
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05116 81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK 159 (257)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence 677777654 45899999999999999999999999999999999999999999999999999876543321 12223
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
++..|+|||.+.+ ..++.++|+|||||++|||++ |.+||.+.+..+....+.....
T Consensus 160 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~---------------------- 216 (257)
T cd05116 160 WPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER---------------------- 216 (257)
T ss_pred CCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC----------------------
Confidence 3467999999865 568889999999999999997 9999988766555544432100
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......++.++.+||.+||+.||++||++++|..
T Consensus 217 -----~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 217 -----MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred -----CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 0112345899999999999999999999999865
No 310
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.8e-42 Score=318.22 Aligned_cols=251 Identities=23% Similarity=0.370 Sum_probs=202.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.++|.+.+.||+|+||.||+|.+... +..||+|.+..... ......+.+|+.+++.++|+||+++++++.....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 57899999999999999999987644 37899999754321 1223456789999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeee
Q 015948 86 LHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF 155 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DF 155 (397)
.|+||||++ |+|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df 163 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence 999999998 68888876432 23678899999999999999999999999999999999999999999999
Q ss_pred ccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCC
Q 015948 156 GLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTAT 232 (397)
Q Consensus 156 G~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~ 232 (397)
|+++....... ......++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+.+..+....+... .
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~--- 238 (277)
T cd05032 164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG-G--- 238 (277)
T ss_pred ccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC-C---
Confidence 99986543321 2233445677999999866 458899999999999999998 99999877665554443311 0
Q ss_pred CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
. .......+.++.+||.+||..+|++|||+.++++
T Consensus 239 ~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 H-----------------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred C-----------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 0111233789999999999999999999999986
No 311
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.7e-42 Score=322.47 Aligned_cols=252 Identities=26% Similarity=0.388 Sum_probs=203.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~ 84 (397)
.++|.+.+.||+|+||.||++.+... ...+|+|.+..... ......+.+|+.+++.+ +|+||+++++++..++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 57899999999999999999987643 36899999875432 22234577899999999 8999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC
Q 015948 85 NLHLVFEFME-TDLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG 148 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~---------------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~ 148 (397)
.+|++|||+. |+|..++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~ 169 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDH 169 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCC
Confidence 9999999998 6888887542 34589999999999999999999999999999999999999999
Q ss_pred cEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015948 149 QLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIF 225 (397)
Q Consensus 149 ~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~ 225 (397)
.+||+|||+++........ .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+....+.
T Consensus 170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 248 (293)
T cd05053 170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK 248 (293)
T ss_pred eEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999876443211 112223456999999866 568999999999999999997 999998776655544432
Q ss_pred HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
..... ......+.++.+|+.+||..||++|||+.+++++
T Consensus 249 ~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 249 EGYRM---------------------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred cCCcC---------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 21100 1112347899999999999999999999999874
No 312
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-42 Score=322.13 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=203.1
Q ss_pred cceeeeeeeeecCcEEEEEEEECCC-----CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
.+|.+.+.||+|+||+||+|.+..+ +..||+|++..... ......+.+|+.+++.++||||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 4689999999999999999987543 57899999874332 22234567899999999999999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948 87 HLVFEFME-TDLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~---------------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~ 150 (397)
++++||+. ++|..++... ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCce
Confidence 99999998 5777776432 2247888899999999999999999999999999999999999999
Q ss_pred EEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948 151 KLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA 227 (397)
Q Consensus 151 kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~ 227 (397)
||+|||+++....... ......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+....+.+..+...
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~ 242 (283)
T cd05091 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR 242 (283)
T ss_pred EecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999886543221 1233445677999999876 458899999999999999997 88999887776666555432
Q ss_pred hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
... ......+..+.+|+.+||+.+|.+||++++++..
T Consensus 243 ~~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 243 QVL---------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CcC---------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 110 1123457889999999999999999999999863
No 313
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.4e-42 Score=313.77 Aligned_cols=248 Identities=22% Similarity=0.364 Sum_probs=203.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|++|.||+|.+. +++.||+|.++.... ....+.+|+.++++++|+||+++++++...+.+|+||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 467999999999999999999875 457899999865432 2335778999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||+. ++|.+.+.... ..++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA 160 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence 9996 68888887653 458999999999999999999999999999999999999999999999999998775322111
Q ss_pred -cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 169 -THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 169 -~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
.....+..|+|||.+.+ ..++.++|+|||||++|+|++ |+.||.+......+..+......
T Consensus 161 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 223 (261)
T cd05068 161 REGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM---------------- 223 (261)
T ss_pred cCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 11112346999999876 568899999999999999998 99999887766655554322110
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.+++.+||+.+|.+||++.++++
T Consensus 224 -----------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 224 -----------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred -----------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 011234789999999999999999999999875
No 314
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.2e-42 Score=318.07 Aligned_cols=250 Identities=20% Similarity=0.292 Sum_probs=197.9
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCc--EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec------CCe
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------KGN 85 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------~~~ 85 (397)
|.+.+.||+|+||.||+|.+..++. .+|+|.+............+.+|+.+++.++|+||+++++++.. ...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4578899999999999999877765 69999887654333344567789999999999999999987632 125
Q ss_pred EEEEEEccc-cCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 86 LHLVFEFME-TDLETVIRN-----TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~-----~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
.+++|||+. |+|...+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 789999998 678776643 22348899999999999999999999999999999999999999999999999998
Q ss_pred eeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 160 IFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 160 ~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
........ .....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+....+....+...-.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------- 232 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR------- 232 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-------
Confidence 76433221 122234567999999876 568999999999999999998 8899988766555444432100
Q ss_pred CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
....+.++..+.++|.+||+.||++|||+.+++++
T Consensus 233 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 --------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 01123457889999999999999999999999864
No 315
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.8e-42 Score=316.84 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=204.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.++|++.+.||+|+||.||+|.+..++. .+|+|.+..... ......+.+|+.+++.++||||+++++++.+++.+|
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 4679999999999999999998865543 799998865332 222346778999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+||||++ |+|..++......++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++........
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 9999998 578888877666789999999999999999999999999999999999999999999999999987644322
Q ss_pred cc---cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 167 RF---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 167 ~~---~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. ....++..|+|||.+.+ ..++.++|+|||||++|+|++ |..||...+..+....+......
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~------------ 228 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL------------ 228 (267)
T ss_pred eeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC------------
Confidence 11 11222456999999976 568999999999999999886 99999877665554444322110
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++..+.+++.+||+.+|.+||++.++++
T Consensus 229 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 229 ---------------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 011234789999999999999999999999875
No 316
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.6e-42 Score=313.48 Aligned_cols=248 Identities=21% Similarity=0.354 Sum_probs=201.4
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
..++|++.+.||+|+||.||+|.+. .+..+|+|.+...... ...+.+|+.++++++|+||+++++++. ....|++
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence 3578999999999999999999765 5677999998754332 245789999999999999999999885 4568999
Q ss_pred EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|||+. ++|.+.+... ...+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++.........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 99998 5888887654 345899999999999999999999999999999999999999999999999999876443221
Q ss_pred -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
.....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+.+..+....+......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM--------------- 222 (260)
T ss_pred cccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence 112234556999999865 558899999999999999998 89999887766655554322110
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.+|+.+||..||++|||++++++
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 223 ------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred ------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 111234789999999999999999999999874
No 317
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.9e-42 Score=319.80 Aligned_cols=258 Identities=23% Similarity=0.298 Sum_probs=205.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCC----------------cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTG----------------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~----------------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv 74 (397)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCEe
Confidence 468999999999999999999876544 45899988754332 2334567899999999999999
Q ss_pred EEEeeeecCCeEEEEEEccc-cCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948 75 ELIDAFPHKGNLHLVFEFME-TDLETVIRNTN----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (397)
Q Consensus 75 ~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL 143 (397)
++++++..++.+++||||+. ++|..++.... ..+++..++.++.|++.||+|||++||+||||||+||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 99999999999999999998 57888776543 25899999999999999999999999999999999999
Q ss_pred EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCCCCCCCcHH
Q 015948 144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDID 219 (397)
Q Consensus 144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~ 219 (397)
++.++.++|+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||...+..+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ 241 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence 99999999999999986543321 1223445667999999876 458999999999999999997 678887766666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.+..+...+..... .......+.++.++.+||.+||+.||.+|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 242 VIENAGHFFRDDGR--------------------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHhccccccc--------------------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 55554332211100 0001112345789999999999999999999999975
No 318
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.9e-42 Score=312.87 Aligned_cols=248 Identities=22% Similarity=0.366 Sum_probs=202.2
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
..++|++.++||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++.++|+||+++++.+. .+.+|+|
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 4678999999999999999999864 578899999864332 2346778999999999999999999874 5678999
Q ss_pred EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-
Q 015948 90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~- 166 (397)
|||+. |+|.+.+... +..++...+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 99997 6888887653 34689999999999999999999999999999999999999999999999999987652221
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+......
T Consensus 159 ~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 222 (260)
T cd05067 159 AREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM--------------- 222 (260)
T ss_pred cccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC---------------
Confidence 1122334567999999866 558899999999999999998 99999887766655554322111
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+.++.++|.+||..+|++||+++++++
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 223 ------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111234789999999999999999999999875
No 319
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.2e-42 Score=314.08 Aligned_cols=251 Identities=21% Similarity=0.338 Sum_probs=203.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.++|...+.||+|+||.||+|++..++. .+|+|.+..... ......+.+|+.+++.++|+||+++++++...+..|
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 4579999999999999999999876655 799998864322 222345778999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+||||++ ++|..++......+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++........
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 162 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE 162 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence 9999998 578788776666789999999999999999999999999999999999999999999999999987643222
Q ss_pred ccc---ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 167 RFT---HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 167 ~~~---~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
... ....+..|+|||++.+ ..++.++|||||||++|||++ |..||...+..+....+......+.
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~---------- 231 (268)
T cd05063 163 GTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPA---------- 231 (268)
T ss_pred cceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC----------
Confidence 111 1112346999999876 568899999999999999997 9999987776665555533211000
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
....+.++.+|+.+||+.+|++||++.++++
T Consensus 232 -----------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 232 -----------------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1123688999999999999999999999975
No 320
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.2e-42 Score=319.88 Aligned_cols=254 Identities=24% Similarity=0.339 Sum_probs=203.8
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~ 82 (397)
...++|.+.+.||+|+||.||+|.+ ..++..||+|+++.... ......+.+|+.+++++ +|+||+++++++..
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 3467899999999999999999975 23456899998865432 22234577899999999 79999999999999
Q ss_pred CCeEEEEEEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 83 KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 83 ~~~~~lv~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
.+.+|+||||+. |+|..++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++.
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999998 68888886543 3489999999999999999999999999999999999999999999999999986
Q ss_pred eCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 161 FGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 161 ~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
...... ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+.......... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~-~------ 262 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY-R------ 262 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC-c------
Confidence 543321 1112334667999999876 458899999999999999998 9999987765554444332100 0
Q ss_pred CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.......+..+.+|+.+||..+|++|||+.|+++
T Consensus 263 -------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 263 -------------------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred -------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0011234789999999999999999999999985
No 321
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.2e-42 Score=316.26 Aligned_cols=250 Identities=21% Similarity=0.296 Sum_probs=197.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcE----EEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~----~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
.++|++.+.||+|+||+||+|.+..++.. +++|.+..... ......+..|+.+++.+.||||+++++++. +...
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~ 83 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASL 83 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCcc
Confidence 46899999999999999999998877764 66666542211 112234567888999999999999999875 4567
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
++++||+. |+|.+++......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 88999998 79999988776679999999999999999999999999999999999999999999999999998764322
Q ss_pred C--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 R--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
. ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+........ ++.... ..+
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~-~~~~~~-~~~--------- 231 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPD-LLEKGE-RLA--------- 231 (279)
T ss_pred cccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHCCC-cCC---------
Confidence 2 2223345667999999876 468999999999999999998 999998765443322 222100 000
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....+.++.+++.+||..||++|||+.|+++
T Consensus 232 ----------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 232 ----------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ----------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00123578899999999999999999999876
No 322
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.2e-42 Score=317.34 Aligned_cols=250 Identities=20% Similarity=0.333 Sum_probs=202.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
..+|++.++||+|+||.||+|... .++..+|+|.+.... ......+.+|+++++.++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 578999999999999999999643 346689999876432 2223457789999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948 86 LHLVFEFME-TDLETVIRNTN--------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~--------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~ 150 (397)
.|+||||+. |+|.+++.... ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence 999999998 58888876543 247899999999999999999999999999999999999999999
Q ss_pred EEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015948 151 KLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA 227 (397)
Q Consensus 151 kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~ 227 (397)
||+|||+++....... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||......+....+...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 240 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG 240 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence 9999999976533221 1122334567999999876 568999999999999999998 89999877666655444322
Q ss_pred hCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
... .....+++.+.+||.+||+.||.+||+++++++
T Consensus 241 ~~~---------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 241 REL---------------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred ccC---------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 100 111245789999999999999999999999875
No 323
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.3e-41 Score=311.01 Aligned_cols=249 Identities=22% Similarity=0.367 Sum_probs=204.8
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
..++|++.+.||+|+||+||+|.+. .+..+|||.+..... ....+.+|+.+++.++|+||+++++++......|+|
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 3678999999999999999999875 557899999874332 234577899999999999999999999998999999
Q ss_pred EEccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 90 FEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|||++ ++|.+.+.... ..++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence 99998 58888887643 45899999999999999999999999999999999999999999999999999876432111
Q ss_pred -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
......+..|+|||.+.+ ..++.++|+|||||++|+|++ |+.||.+.+....+..+...+...
T Consensus 160 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 224 (261)
T cd05034 160 AREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP-------------- 224 (261)
T ss_pred hhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------
Confidence 111223456999999876 568899999999999999998 999998887776666654322111
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....+.++.+++.+||..+|++||+++++++
T Consensus 225 -------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 225 -------------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred -------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 11223688999999999999999999999875
No 324
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=9.2e-42 Score=311.53 Aligned_cols=242 Identities=21% Similarity=0.342 Sum_probs=195.1
Q ss_pred eeeeecCcEEEEEEEECCCC---cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
++||+|+||.||+|....++ ..||+|.+...... .....+.+|+.+++.+.|+||+++++++. ...+++||||+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 47999999999999876555 78999998755433 23446778999999999999999999875 456899999998
Q ss_pred -cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc--
Q 015948 95 -TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ-- 171 (397)
Q Consensus 95 -g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~-- 171 (397)
|+|.+++.... .+++..+..++.|++.||+|||++|++|+||||+|||++.++.+||+|||+++............
T Consensus 79 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 79 LGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 58888887654 68999999999999999999999999999999999999999999999999998765433222211
Q ss_pred -ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 172 -VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 172 -~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
.++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+......
T Consensus 158 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------- 217 (257)
T cd05060 158 GRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL------------------- 217 (257)
T ss_pred ccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC-------------------
Confidence 12346999999866 568999999999999999997 99999877665544443221000
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++..++++|.+||..||++||++.++++
T Consensus 218 --------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 218 --------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred --------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 111234789999999999999999999999875
No 325
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=7.2e-42 Score=318.13 Aligned_cols=250 Identities=22% Similarity=0.344 Sum_probs=202.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
..+|.+.+.||+|+||.||+|.+. .++..+++|.+..... .....+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH--HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 456999999999999999999754 3455688888753322 112356789999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc
Q 015948 86 LHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ 149 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~ 149 (397)
.++||||++ ++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999998 68888876532 34789999999999999999999999999999999999999999
Q ss_pred EEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 015948 150 LKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA 226 (397)
Q Consensus 150 ~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~ 226 (397)
++|+|||++........ ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 240 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 240 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence 99999999986543321 2234456778999999876 568899999999999999998 9999987776655544322
Q ss_pred HhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.. ++ ......+..+.+|+.+||+.||.+||++.++++
T Consensus 241 ~~-------~~--------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 241 GR-------VL--------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CC-------CC--------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 10 00 011234788999999999999999999999876
No 326
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-41 Score=320.48 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=201.2
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC-------CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~ 82 (397)
.++|.+.+.||+|+||.||+|++.. ....+|+|.+..... ......+.+|+.+++.+ .||||+++++++..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 5799999999999999999998642 345799998764322 22234567899999999 69999999999999
Q ss_pred CCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948 83 KGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (397)
Q Consensus 83 ~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~ 146 (397)
++.+|+||||+. |+|.+++.... ..++...+..++.||+.||.|||++|++||||||+|||++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 999999999998 68888886532 34888999999999999999999999999999999999999
Q ss_pred CCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948 147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (397)
Q Consensus 147 ~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~ 223 (397)
++.+||+|||+++........ .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~ 248 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248 (314)
T ss_pred CCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999865432211 112223456999999876 568999999999999999998 8899987766555554
Q ss_pred HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
+..... ......++.++++||.+||..||++|||+.++++
T Consensus 249 ~~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 249 LREGHR---------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHcCCC---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 432100 0112345789999999999999999999999886
No 327
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-41 Score=318.58 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=204.1
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEEC-------CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEee
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDT-------KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDA 79 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~ 79 (397)
....++|.+.+.||+|+||.||+|++. ..+..||+|.+..... ......+.+|+.+++.+ +||||+++++.
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 345789999999999999999999753 2345799998764322 22334577899999999 89999999999
Q ss_pred eecCCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948 80 FPHKGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (397)
Q Consensus 80 ~~~~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL 143 (397)
+...+.+|+||||+. |+|..++.+.. ..++...+..++.||+.||.|||++|++||||||+|||
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil 169 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL 169 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEE
Confidence 999999999999998 58888886532 24778889999999999999999999999999999999
Q ss_pred EccCCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015948 144 IGSHGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ 220 (397)
Q Consensus 144 l~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~ 220 (397)
++.++.+||+|||+++........ .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 999999999999999876443222 222334567999999976 568899999999999999998 7888987766555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
...+...... .....++.++++||.+||..+|.+||++.++++.
T Consensus 249 ~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 249 FKLLKEGHRM---------------------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHcCCcC---------------------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 5444221000 0112457899999999999999999999999863
No 328
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.5e-41 Score=316.60 Aligned_cols=267 Identities=13% Similarity=0.154 Sum_probs=198.9
Q ss_pred CCccccChhhhcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCcc---------chHHHHHHHHHhc
Q 015948 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVN---------FTALREIKLLKEL 68 (397)
Q Consensus 1 m~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~---------~~~~~E~~~l~~l 68 (397)
|..+.+.....++|.+.+.||+|+||+||+|.+..+ +..+|+|+........... .....++..+..+
T Consensus 1 ~~~~~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (294)
T PHA02882 1 MEGIPLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI 80 (294)
T ss_pred CCCeeeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC
Confidence 777888888899999999999999999999998877 6678888654322111000 0112233455667
Q ss_pred CCCCeeEEEeeeecCC----eEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE
Q 015948 69 KSPHIIELIDAFPHKG----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI 144 (397)
Q Consensus 69 ~hp~iv~l~~~~~~~~----~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl 144 (397)
.|++|+++++++.... ..|+++|++..++...+... ...++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill 159 (294)
T PHA02882 81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV 159 (294)
T ss_pred CCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 8999999998765433 45788998887777666543 236788899999999999999999999999999999999
Q ss_pred ccCCcEEEeeeccceeeCCCC-------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCc
Q 015948 145 GSHGQLKLADFGLARIFGSPD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD 217 (397)
Q Consensus 145 ~~~~~~kl~DFG~a~~~~~~~-------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 217 (397)
+.++.++|+|||+|+.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+.
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999998764322 11223468999999999876 5689999999999999999999999987743
Q ss_pred -HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 218 -IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 218 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
..........+-..... .....+..+.++.+++..|+..+|++||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 239 NGNLIHAAKCDFIKRLHE---------------------GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred chHHHHHhHHHHHHHhhh---------------------hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 22222111100000000 00112344788999999999999999999999875
No 329
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2e-41 Score=309.93 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=199.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+.+.||+|+||.||+|.+..+ ..+|+|.+.... .....+.+|+.+++.++|+|++++++++. .+..|+||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 47899999999999999999987654 469999876432 22345778999999999999999999885 45689999
Q ss_pred Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (397)
Q Consensus 91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~- 167 (397)
||+. |+|.+++... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||+++........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 9998 5888888764 334889999999999999999999999999999999999999999999999999876433211
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
.....++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+..+.+....+......
T Consensus 160 ~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 222 (260)
T cd05069 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM---------------- 222 (260)
T ss_pred cCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 112234566999999866 458899999999999999998 89999887766655544322100
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.+|+.+||..||.+||+++++++
T Consensus 223 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 223 -----------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111234789999999999999999999999875
No 330
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.8e-41 Score=309.27 Aligned_cols=248 Identities=24% Similarity=0.380 Sum_probs=202.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.+|++.+.||+|+||.||+|.+. .+..+|+|.+...... ...+.+|+++++.++||||+++++++......|+|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 46999999999999999999875 4678999988643322 2357789999999999999999999999999999999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-cc
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-FT 169 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~-~~ 169 (397)
|+.| +|.+.+......+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......... ..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 9984 777777766666899999999999999999999999999999999999999999999999999866433211 11
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
...++..|+|||++.+ ..++.++|+|||||++|||++ |.+||...........+.......
T Consensus 160 ~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------- 221 (256)
T cd05112 160 GTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY----------------- 221 (256)
T ss_pred CCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC-----------------
Confidence 2233456999999876 568899999999999999998 999998776665555443211000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.....+..+.+|+.+||..+|++|||+.+++++
T Consensus 222 ----------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 222 ----------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred ----------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 011237899999999999999999999999864
No 331
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1e-41 Score=313.37 Aligned_cols=250 Identities=22% Similarity=0.344 Sum_probs=202.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
..|.+.+.||+|+||.||+|.+..+++ .||||++.... .......+.+|+.+++.++||||+++++++..++.+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 569999999999999999999887665 59999986432 22234467789999999999999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
||||++| +|.+++......+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 9999985 787777766667899999999999999999999999999999999999999999999999998765432211
Q ss_pred --cccccc---CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 168 --FTHQVF---ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 168 --~~~~~~---t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
.....+ +..|+|||.+.+ ..++.++|||||||++|||++ |..||...+..+....+......
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~----------- 230 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL----------- 230 (269)
T ss_pred cccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC-----------
Confidence 111111 346999999865 568999999999999999886 99999877666555544221100
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.+++.+||..+|.+||++++++.
T Consensus 231 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 231 ----------------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred ----------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011234788999999999999999999999985
No 332
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-41 Score=310.78 Aligned_cols=242 Identities=21% Similarity=0.343 Sum_probs=193.9
Q ss_pred eeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-c
Q 015948 19 VLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-T 95 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g 95 (397)
.||+|+||.||+|.+. ..+..||+|++..... ......+.+|+.++++++|+||+++++.++ ....++||||++ |
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 4899999999999765 4456799998865422 223345778999999999999999999885 457899999998 5
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc---cccc
Q 015948 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQV 172 (397)
Q Consensus 96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~---~~~~ 172 (397)
+|.+.+......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.......... ....
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGK 159 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCC
Confidence 7888877656679999999999999999999999999999999999999999999999999998654332211 1122
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (397)
++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+....+.....
T Consensus 160 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---------------------- 216 (257)
T cd05115 160 WPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR---------------------- 216 (257)
T ss_pred CCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----------------------
Confidence 2456999999875 558899999999999999996 9999988776665544432210
Q ss_pred cCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 252 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
....+..++++.++|.+||..||++||++.++.+
T Consensus 217 -----~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 -----LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0111344789999999999999999999999865
No 333
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.5e-42 Score=317.45 Aligned_cols=249 Identities=24% Similarity=0.388 Sum_probs=197.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
+|++.+.||+|+||.||+|.+.. ....+++|.+...... .....+.+|+.+++.++||||+++++.+..++..|
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS-SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH-HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 58899999999999999998753 2357888887643322 12345778999999999999999999999999999
Q ss_pred EEEEccc-cCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948 88 LVFEFME-TDLETVIRNTN-----------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~-----------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL 143 (397)
+|+||+. |+|..++.... ..++...+..++.|++.||.|||++|++||||||+|||
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 9999999 57777765421 24788899999999999999999999999999999999
Q ss_pred EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015948 144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ 220 (397)
Q Consensus 144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~ 220 (397)
++.++.+||+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+......
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~ 238 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL 238 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 99999999999999986533221 1122234557999999866 568999999999999999998 9999987765544
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
...+...... ......+.++.+|+.+||+.||++||++.++++
T Consensus 239 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 239 FNLLKTGYRM---------------------------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHhCCCCC---------------------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 4332211100 011234789999999999999999999999875
No 334
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1e-41 Score=317.76 Aligned_cols=258 Identities=25% Similarity=0.327 Sum_probs=201.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC--------------CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT--------------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~--------------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l 76 (397)
.++|++.+.||+|+||.||+|++..+ ...||+|.++.... ......+.+|++++++++|+||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 46899999999999999999987543 23589999865422 2223357789999999999999999
Q ss_pred EeeeecCCeEEEEEEccc-cCHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEE
Q 015948 77 IDAFPHKGNLHLVFEFME-TDLETVIRNTN-----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI 144 (397)
Q Consensus 77 ~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~-----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl 144 (397)
++++...+..|+||||+. ++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||++
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 999999999999999998 57877775432 136788899999999999999999999999999999999
Q ss_pred ccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCCCCCCCcHHH
Q 015948 145 GSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQ 220 (397)
Q Consensus 145 ~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~ 220 (397)
+.++.+||+|||++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++ |..||...+..+.
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence 9999999999999976533221 1122334567999999876 458999999999999999987 6678887776665
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
+..+...+....... .....+..++.+++||.+||+.||++||+++++++
T Consensus 242 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 242 IENTGEFFRNQGRQI--------------------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHhhhhccccc--------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 555433221100000 00112234789999999999999999999999975
No 335
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.2e-41 Score=309.43 Aligned_cols=243 Identities=24% Similarity=0.377 Sum_probs=197.6
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cC
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TD 96 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~ 96 (397)
++||.|+||.||+|.+.. ++.||+|.+...... .....+.+|+++++.++|+||+++++++.+....|+||||+. ++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 479999999999999887 999999988754332 234467789999999999999999999999999999999997 57
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc--cccccC
Q 015948 97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF--THQVFA 174 (397)
Q Consensus 97 L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~--~~~~~t 174 (397)
|.+++.+....+++..+..++.+++.||+|||++|++||||||+|||++.++.+||+|||++.......... .....+
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 888887766668999999999999999999999999999999999999999999999999998654221111 112224
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
..|+|||.+.+ ..++.++|+|||||++|+|++ |..||...........+......
T Consensus 159 ~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~----------------------- 214 (251)
T cd05041 159 IKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRM----------------------- 214 (251)
T ss_pred eccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCC-----------------------
Confidence 45999999866 568999999999999999998 88898877655444433221100
Q ss_pred CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.+++.+||..+|.+|||+.|+++
T Consensus 215 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 215 ----PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred ----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 011234789999999999999999999999986
No 336
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.8e-41 Score=309.25 Aligned_cols=244 Identities=21% Similarity=0.331 Sum_probs=201.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||.|+||.||+|... |+.||+|.+..... ....+.+|+.+++.++|+||+++++++.+....|+||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 467999999999999999999764 78999999865433 3446778999999999999999999999899999999
Q ss_pred Eccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||++ ++|.+++..... .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9998 588888876542 589999999999999999999999999999999999999999999999999987633221
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
....+..|+|||++.+ ..++.++|+|||||++|+|++ |..||......+....+.....
T Consensus 158 -~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------------ 217 (256)
T cd05039 158 -SGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR------------------ 217 (256)
T ss_pred -cCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC------------------
Confidence 2233456999999865 468889999999999999997 9999987765544433322100
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.......++++.++|.+||..+|++||++.++++
T Consensus 218 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 218 ---------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred ---------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 0111234789999999999999999999999986
No 337
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-44 Score=363.39 Aligned_cols=260 Identities=26% Similarity=0.437 Sum_probs=216.0
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
+.-++.-..+||.|.||.||.|.+..+|...|+|-+............+.+|.++|..++|||+|++++.-.+.+.++|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 45578888999999999999999999999999999987655544444567899999999999999999999999999999
Q ss_pred EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (397)
Q Consensus 90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---- 165 (397)
||||+|+.+..+...+.-.++...+.|..|++.|+.|||++|||||||||+||+++.+|-+|++|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 9999964444444445557888888999999999999999999999999999999999999999999999875543
Q ss_pred CcccccccCceeeChhcccCcc--CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 RRFTHQVFARWYRAPELLFGAK--QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-LGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ~~~~~~~~t~~y~aPE~l~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.......||+.|||||++.+.+ +.+.+.|||||||++.||+||+-||...++.-+ +..+ +..
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V----~~g----------- 1457 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV----AAG----------- 1457 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH----hcc-----------
Confidence 3345778999999999997643 467789999999999999999999986654432 2222 111
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
....++.++|.+.+|||..||..||++|+++.|+++|.|-..
T Consensus 1458 ------------h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1458 ------------HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred ------------CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 112233457999999999999999999999999999998654
No 338
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.3e-42 Score=325.12 Aligned_cols=253 Identities=24% Similarity=0.387 Sum_probs=196.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEE-----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec-C
Q 015948 11 ADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH-K 83 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~-~ 83 (397)
.++|++.+.||+|+||+||+|++ ..+++.||||+++..... .....+.+|+.+|.++ +|+||+++++++.. +
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 47899999999999999999984 356789999998654322 2234577899999999 67999999998754 4
Q ss_pred CeEEEEEEccc-cCHHHHHHhcC---------------------------------------------------------
Q 015948 84 GNLHLVFEFME-TDLETVIRNTN--------------------------------------------------------- 105 (397)
Q Consensus 84 ~~~~lv~e~~~-g~L~~~~~~~~--------------------------------------------------------- 105 (397)
..+|+|||||+ |+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56899999998 68887776432
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cccccccC
Q 015948 106 ---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFA 174 (397)
Q Consensus 106 ---------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t 174 (397)
..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ......++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence 1367778889999999999999999999999999999999999999999999986532221 11222345
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
..|+|||++.+ ..++.++|||||||++|+|++ |..||.+......+..........
T Consensus 245 ~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------- 301 (343)
T cd05103 245 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---------------------- 301 (343)
T ss_pred cceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC----------------------
Confidence 56999999876 568999999999999999996 899987754433332222110000
Q ss_pred CCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
......++++.+++.+||+.||++|||+.++++|
T Consensus 302 ----~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 302 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0011236789999999999999999999999976
No 339
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-41 Score=308.96 Aligned_cols=245 Identities=29% Similarity=0.472 Sum_probs=205.7
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCccC-CccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL 97 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L 97 (397)
||.|+||.||++.+..+++.||+|++....... .....+.+|+.+++.++|+||+++++.++.+...|+||||+. ++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999999899999999987654322 234457789999999999999999999999999999999995 688
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (397)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y 177 (397)
.+.+.... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..............++..|
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY 159 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccc
Confidence 88876653 58999999999999999999999999999999999999999999999999998765443334455677789
Q ss_pred eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc
Q 015948 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257 (397)
Q Consensus 178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (397)
+|||.+.+ ...+.++|+|||||++|+|++|..||...+.......+... . .
T Consensus 160 ~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~--------------------------~ 210 (250)
T cd05123 160 LAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--P--------------------------L 210 (250)
T ss_pred cChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--C--------------------------C
Confidence 99999876 45788999999999999999999999777654444443220 0 0
Q ss_pred ccCCCCCHHHHHHHHHhcCcCCCCCCCH---HHHhcCCCC
Q 015948 258 SLFPSASDDALDLLSKMFTYDPKARITA---QQALEHRYF 294 (397)
Q Consensus 258 ~~~~~~s~~~~~li~~~L~~dP~~R~t~---~e~l~hp~~ 294 (397)
.+...++..+.++|.+||..||++||++ +++++||||
T Consensus 211 ~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 211 RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 1122347899999999999999999999 999999998
No 340
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.1e-41 Score=307.84 Aligned_cols=243 Identities=21% Similarity=0.322 Sum_probs=197.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee-ecCCeEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKGNLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~~~~lv 89 (397)
.++|.+.+.||+|+||.||++... |..+|+|.+.... ....+.+|+.+++.++|+|++++++++ ..++..|+|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 357999999999999999999654 7889999875332 234577899999999999999999875 556789999
Q ss_pred EEccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 90 FEFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|||++ |+|.+++.+... .+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99998 588888876543 48899999999999999999999999999999999999999999999999998653322
Q ss_pred ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 246 (397)
.....+..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+.....
T Consensus 157 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~----------------- 217 (256)
T cd05082 157 -DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK----------------- 217 (256)
T ss_pred -CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-----------------
Confidence 22233456999999866 568899999999999999997 9999987655444444322100
Q ss_pred ccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 247 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
....+.+++.+.++|.+||..+|++|||+.++++
T Consensus 218 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 218 ----------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0112345789999999999999999999999975
No 341
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.4e-41 Score=313.23 Aligned_cols=264 Identities=22% Similarity=0.321 Sum_probs=195.5
Q ss_pred hcce-eeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--C
Q 015948 11 ADRY-LKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--K 83 (397)
Q Consensus 11 ~~~y-~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~ 83 (397)
.++| .+.+.||+|+||+||++. ...++..||+|.+..... ......+.+|+.+|+.++||||+++++++.. .
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 4566 999999999999998864 345678999999865422 1233456789999999999999999998755 3
Q ss_pred CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 84 GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 84 ~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
..+|+||||+. |+|.+.+... .+++..++.++.|++.||+|||++||+||||||+|||++.++.++|+|||+++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 46899999998 5777777654 38999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948 163 SPDRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (397)
Q Consensus 163 ~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 239 (397)
..... .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...... ...+... . ...+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~---~-~~~~~~~ 231 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGP---K-QGQMTVV 231 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcc---c-ccccchh
Confidence 32211 112234566999999876 45889999999999999999999887654321 1111100 0 0000000
Q ss_pred CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.+.+.. ............+..+.+++.+||..||++|||++++++
T Consensus 232 -~~~~~~-----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 232 -RLIELL-----ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred -hhhhhh-----hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000 000001122356789999999999999999999999985
No 342
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2e-41 Score=315.92 Aligned_cols=258 Identities=24% Similarity=0.318 Sum_probs=199.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC----------------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK----------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv 74 (397)
.++|++.+.||+|+||+||+|.+.. ++..+|+|++..... ......+.+|+.+++.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcc
Confidence 4689999999999999999986432 345799999864422 22234577899999999999999
Q ss_pred EEEeeeecCCeEEEEEEccc-cCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948 75 ELIDAFPHKGNLHLVFEFME-TDLETVIRNTN----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (397)
Q Consensus 75 ~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~----------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL 143 (397)
++++++..++.+|+||||+. |+|..++.... ..+++..+..++.||+.||+|||++|++||||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 99999999999999999998 58888876542 23677889999999999999999999999999999999
Q ss_pred EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh--CCCCCCCCCcHH
Q 015948 144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDID 219 (397)
Q Consensus 144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~ 219 (397)
++.++.++|+|||+++.+..... ......++..|++||+..+ ..++.++|+|||||++|||++ |..||...+..+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999986533221 1122333567999998766 458999999999999999998 678887766655
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 220 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.+......+...... ........++..+.+|+.+||+.||.+||++.++++
T Consensus 242 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 242 VIENTGEFFRDQGRQ--------------------VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHhhcccc--------------------ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 544332211100000 000112335789999999999999999999999875
No 343
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.6e-42 Score=314.09 Aligned_cols=247 Identities=26% Similarity=0.416 Sum_probs=196.0
Q ss_pred eeeeeeeecCcEEEEEEEEC----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 15 LKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+.+.||.|.||.||+|... ..+..|+||.+... ........+.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccccccccccc
Confidence 46789999999999999887 34568999998542 22223557889999999999999999999999888899999
Q ss_pred Eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--
Q 015948 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-- 166 (397)
Q Consensus 91 e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-- 166 (397)
|||. |+|.+.+... ...+++..+..++.||+.||.|||+++++|+||++.|||++.++.+||+|||++........
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9998 7899998887 55699999999999999999999999999999999999999999999999999987632221
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
..........|+|||.+.+ ..++.++||||||+++|||++ |..||...+..+....+......
T Consensus 161 ~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~--------------- 224 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRL--------------- 224 (259)
T ss_dssp ESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEET---------------
T ss_pred ccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc---------------
Confidence 1222334566999999876 448999999999999999999 78999888776666665332111
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++..+.++|.+||..||++||++.++++
T Consensus 225 ------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 225 ------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111235789999999999999999999999975
No 344
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.3e-41 Score=315.91 Aligned_cols=264 Identities=23% Similarity=0.392 Sum_probs=206.9
Q ss_pred ceeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCcc--CCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 86 (397)
+|.+.+.||+|+||.||+|++. .+++.||||++...... ......+.+|+.++.++ +|+||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4889999999999999999864 46789999998754322 22233566899999999 589999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+||||+. |+|...+... ..+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||++..+....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 99999998 4777777654 458999999999999999999999999999999999999999999999999988754332
Q ss_pred C-cccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 015948 166 R-RFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (397)
Q Consensus 166 ~-~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 243 (397)
. ......++..|+|||.+.+.. ..+.++|+||||+++|+|++|..||...........+.+......
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 228 (288)
T cd05583 160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK----------- 228 (288)
T ss_pred ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC-----------
Confidence 2 122345778899999986533 367899999999999999999999864432211122211111000
Q ss_pred cccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC---HHHHhcCCCCCCCCCCC
Q 015948 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRYFSSAPLPT 301 (397)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t---~~e~l~hp~~~~~~~~~ 301 (397)
......++.++.++|.+||+.||++||| +.++|+||||++..+..
T Consensus 229 -------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~ 276 (288)
T cd05583 229 -------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDD 276 (288)
T ss_pred -------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHH
Confidence 0112335789999999999999999998 56789999999876643
No 345
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.8e-41 Score=326.46 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=202.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC-----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~ 84 (397)
.++|.+.+.||+|+||.||+|++. .+++.||+|++...... .....+.+|+.+|.++. ||||+++++++...+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 567999999999999999999853 35578999999754322 22345778999999997 999999999999999
Q ss_pred eEEEEEEccc-cCHHHHHHhcC----------------------------------------------------------
Q 015948 85 NLHLVFEFME-TDLETVIRNTN---------------------------------------------------------- 105 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~---------------------------------------------------------- 105 (397)
.+|+|||||. |+|.+++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 9999999998 68888876432
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948 106 ---------------------------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (397)
Q Consensus 106 ---------------------------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~ 146 (397)
..++...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE 274 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC
Confidence 13566778889999999999999999999999999999999
Q ss_pred CCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948 147 HGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (397)
Q Consensus 147 ~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~ 223 (397)
++.+||+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||......+.+..
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~ 353 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN 353 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence 99999999999986533221 1223456778999999976 558899999999999999998 8889887665554443
Q ss_pred HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.+.. +. .+ .....++.++.+|+.+||..+|.+||++.+|++.
T Consensus 354 ~~~~-~~-~~------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 354 AIKR-GY-RM------------------------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHc-CC-CC------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 3221 00 00 1122457899999999999999999999999863
No 346
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.2e-42 Score=314.84 Aligned_cols=239 Identities=16% Similarity=0.255 Sum_probs=190.5
Q ss_pred eeeeecCcEEEEEEEECCCCc-------EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQ-------TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~-------~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
+.||+|+||.||+|.+...+. .+|+|.+.... ......+.+|+.+++.++||||+++++++..+...++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 469999999999998865543 38888775332 222345678999999999999999999999989999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc--------EEEeeeccceee
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--------LKLADFGLARIF 161 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~--------~kl~DFG~a~~~ 161 (397)
||++ |+|..++......+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++|||++...
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 9998 5788887766666899999999999999999999999999999999999987765 699999998765
Q ss_pred CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 162 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
... ....++..|+|||++.+...++.++|||||||++|+|++| .+||...+....... ... .
T Consensus 159 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~---~--------- 221 (258)
T cd05078 159 LPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YED---R--------- 221 (258)
T ss_pred CCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHc---c---------
Confidence 332 2345677799999997756689999999999999999998 466665544433221 110 0
Q ss_pred CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
..+....+.++.+||.+||+.||++|||++++++.
T Consensus 222 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 222 ----------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ----------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 01112336789999999999999999999999864
No 347
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3e-41 Score=311.93 Aligned_cols=250 Identities=23% Similarity=0.371 Sum_probs=202.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
.++|.+.+.||+|+||+||+|.++.+|. .+|+|.+..... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 5789999999999999999999877665 589998765432 2233457789999999999999999999876 789
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
++||||+. |+|.+.+.+....+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 99999998 68998888776679999999999999999999999999999999999999999999999999998765332
Q ss_pred Cccc--ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 RRFT--HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ~~~~--~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.... ...++..|+|||.+.. ..++.++|+|||||++|||++ |.+||.+....+....+.....
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------------- 229 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER------------- 229 (279)
T ss_pred cceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-------------
Confidence 2221 1122456999999865 568899999999999999998 9999988765554433322100
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.......+.++.+++.+||..||.+||++.++++
T Consensus 230 --------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 230 --------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred --------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0111234688999999999999999999999875
No 348
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-41 Score=320.38 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=201.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC-------CcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeec
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT-------GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~ 82 (397)
..+|++.+.||+|+||.||+|++... +..||+|.+.... .......+.+|+.+++++ +||||+++++++..
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 45799999999999999999986432 2368999876432 222234677899999999 79999999999999
Q ss_pred CCeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc
Q 015948 83 KGNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (397)
Q Consensus 83 ~~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~ 146 (397)
++.+|++|||++ |+|.+++.+.. ..++...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 999999999998 58888876532 23677888999999999999999999999999999999999
Q ss_pred CCcEEEeeeccceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015948 147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (397)
Q Consensus 147 ~~~~kl~DFG~a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~ 223 (397)
++.+||+|||+++........ .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 248 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 248 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999999999999876433211 112223456999999976 568899999999999999998 8899988766555444
Q ss_pred HHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 224 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
+..... .......+..+.+||.+||+.+|.+||++.+++++
T Consensus 249 ~~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 249 LKEGHR---------------------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHcCCC---------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 432100 01112347899999999999999999999999985
No 349
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.1e-41 Score=314.41 Aligned_cols=251 Identities=22% Similarity=0.335 Sum_probs=201.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.++|.+.+.||.|+||.||+|.+.. ++..||+|++..... ......+.+|+.+++.++||||+++++++.++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 4679999999999999999998753 578899999864332 1223357789999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcC---------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEE
Q 015948 86 LHLVFEFME-TDLETVIRNTN---------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~---------------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NIL 143 (397)
+|+||||++ |+|..++.... ..+++..+..++.||+.||.|||++|++||||||+||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 999999998 58888886432 23788889999999999999999999999999999999
Q ss_pred EccCCcEEEeeeccceeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015948 144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ 220 (397)
Q Consensus 144 l~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~ 220 (397)
++.++.++|+|||++........ .......+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~ 241 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV 241 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999886533221 1122334556999999876 568999999999999999997 8888877665555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 221 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
...+..... .......+.++.+||.+||+.||.+|||+.|+++
T Consensus 242 ~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 242 IYYVRDGNV---------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHhcCCC---------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 444322100 0111234789999999999999999999999874
No 350
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-41 Score=310.65 Aligned_cols=239 Identities=20% Similarity=0.288 Sum_probs=187.4
Q ss_pred eeeeecCcEEEEEEEECC------------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 18 EVLGEGTYGVVYKAIDTK------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~------------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
+.||+|+||.||+|+... ....+++|++.... ......+.+|+.+++.++||||+++++++..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 468999999999997432 22358888865432 2233456789999999999999999999999999
Q ss_pred EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc-------EEEeeecc
Q 015948 86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-------LKLADFGL 157 (397)
Q Consensus 86 ~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~-------~kl~DFG~ 157 (397)
.++||||+++ .|..++......+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|||+
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 9999999995 566666555566999999999999999999999999999999999999987664 89999999
Q ss_pred ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
+...... ....++..|+|||++.+...++.++|||||||++|||+ +|..||......+. ...... ..
T Consensus 159 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~---~~---- 226 (262)
T cd05077 159 PITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEG---QC---- 226 (262)
T ss_pred CccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhc---Cc----
Confidence 8765332 23456777999999875567899999999999999998 58888876543322 111110 00
Q ss_pred CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
......++++.+||.+||+.||.+||++.+|+++
T Consensus 227 ---------------------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 227 ---------------------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ---------------------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0011225789999999999999999999999874
No 351
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.5e-41 Score=305.51 Aligned_cols=243 Identities=23% Similarity=0.386 Sum_probs=196.6
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cC
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TD 96 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~ 96 (397)
+.||+|+||.||+|... ++..+|+|.+..... ......+.+|+.+++.++||||+++++++...+..++||||++ |+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 47899999999999864 678999998765432 2223357789999999999999999999999999999999998 58
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc-cccccCc
Q 015948 97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF-THQVFAR 175 (397)
Q Consensus 97 L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~t~ 175 (397)
|...+......+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......... ....++.
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 158 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence 888877666668999999999999999999999999999999999999999999999999997643322111 1122345
Q ss_pred eeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCC
Q 015948 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (397)
Q Consensus 176 ~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.........+.....
T Consensus 159 ~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------------------- 212 (250)
T cd05085 159 KWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR------------------------- 212 (250)
T ss_pred cccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence 6999999865 568899999999999999998 9999987766555444432110
Q ss_pred CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 255 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......++..+.+|+.+||..+|++||++.++++
T Consensus 213 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 213 --MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0112235789999999999999999999999976
No 352
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.4e-41 Score=306.52 Aligned_cols=248 Identities=25% Similarity=0.404 Sum_probs=203.6
Q ss_pred eeeeeeeeecCcEEEEEEEECCCC----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTG----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
+++.+.||.|+||.||+|.+...+ ..+|+|++....... ....+.+|+.+++.++|+||+++++.+.+.+..|++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 467899999999999999998766 899999986543221 344677899999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 90 FEFME-TDLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|||+. ++|.+.+...... +++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 99998 5888887765444 899999999999999999999999999999999999999999999999999876543221
Q ss_pred cc-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 168 FT-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 168 ~~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
.. ...++..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...+..+....+......
T Consensus 160 ~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 223 (258)
T smart00219 160 KKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL--------------- 223 (258)
T ss_pred ccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC---------------
Confidence 11 1235677999999854 568999999999999999998 88999887666555554322100
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+.++.+++.+||..||++|||+.|+++
T Consensus 224 ------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 224 ------------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ------------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 111235789999999999999999999999986
No 353
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.6e-41 Score=306.70 Aligned_cols=244 Identities=23% Similarity=0.337 Sum_probs=199.4
Q ss_pred eeeeecCcEEEEEEEECC-CCc--EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc
Q 015948 18 EVLGEGTYGVVYKAIDTK-TGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~-~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
+.||+|++|+||+|.+.. ++. .||||.+...... .....+.+|+.++++++|+||+++++.+.. ..+++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999998865 333 6999998765443 344567789999999999999999999988 89999999997
Q ss_pred -cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc---cc
Q 015948 95 -TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FT 169 (397)
Q Consensus 95 -g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~---~~ 169 (397)
|+|.+.+.+.. ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++..+...... ..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 68888887755 56899999999999999999999999999999999999999999999999999876443221 11
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
...++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+.... ..+
T Consensus 159 ~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~------------ 220 (257)
T cd05040 159 HLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-----ERL------------ 220 (257)
T ss_pred CCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-----CcC------------
Confidence 2345667999999865 568999999999999999998 999998777666555554310 000
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+..+.+++.+||..+|++||++.++++
T Consensus 221 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 221 ---------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ---------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 011234789999999999999999999999986
No 354
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9.1e-41 Score=305.55 Aligned_cols=248 Identities=20% Similarity=0.341 Sum_probs=201.4
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
..++|.+.+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.+++.++|+||+++++.+.+ ...|++
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChh---HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 4689999999999999999999765 456799998764321 23457789999999999999999999877 788999
Q ss_pred EEccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|||++ |+|.+++.+. ...++...+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.+.........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 99998 6898888764 445788899999999999999999999999999999999999999999999999876432211
Q ss_pred -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
.....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+.+..+....+......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------------- 222 (260)
T cd05073 159 AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM--------------- 222 (260)
T ss_pred cccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC---------------
Confidence 122234556999999876 568889999999999999998 99999887766555444322110
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......+.++.+++.+||+.+|++||++.++++
T Consensus 223 ------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 223 ------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 111345789999999999999999999998864
No 355
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.8e-41 Score=308.49 Aligned_cols=251 Identities=24% Similarity=0.387 Sum_probs=202.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.++|.+.+.||+|+||.||+|.+... ...||||....... ......+.+|+.+++.++|+||+++++++.+ ...|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 46799999999999999999987544 34689998754332 2233467789999999999999999999875 5578
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
+||||+. |+|.+++......+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++.......
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 9999998 688888877655689999999999999999999999999999999999999999999999999987643321
Q ss_pred c-ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 167 R-FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 167 ~-~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
. .....++..|+|||.+.. ..++.++|||||||++|+|++ |.+||.+.+..+....+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-------------- 227 (270)
T cd05056 163 YKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-------------- 227 (270)
T ss_pred eecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC--------------
Confidence 1 111223456999999865 568899999999999999986 99999888776655554321100
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
...+.++..+.++|.+||..+|.+|||+.+++..
T Consensus 228 -------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 228 -------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1123457899999999999999999999998763
No 356
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=325.70 Aligned_cols=238 Identities=24% Similarity=0.365 Sum_probs=198.2
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
..-++-||+|+.|.||+|+. .++.||||+++..+. .+|+-|++|+|+||+.+.++|.....+|||||||
T Consensus 126 IsELeWlGSGaQGAVF~Grl--~netVAVKKV~elkE---------TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRL--HNETVAVKKVRELKE---------TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhhhhccCcccceeeeec--cCceehhHHHhhhhh---------hhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 34478899999999999964 578999998753221 4888999999999999999999999999999999
Q ss_pred c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccc
Q 015948 94 E-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (397)
Q Consensus 94 ~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 172 (397)
. |-|...++..+ .+.......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||-++..... .....++
T Consensus 195 a~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMSFa 272 (904)
T KOG4721|consen 195 AQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMSFA 272 (904)
T ss_pred ccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhhhh
Confidence 9 77887777654 5889999999999999999999999999999999999999999999999999887654 4556788
Q ss_pred cCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccc
Q 015948 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252 (397)
Q Consensus 173 ~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (397)
||..|||||++.. .+.+.++|||||||+|||||||.-||.+-+...+ +-+.|....
T Consensus 273 GTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----IwGVGsNsL------------------- 328 (904)
T KOG4721|consen 273 GTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IWGVGSNSL------------------- 328 (904)
T ss_pred hhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchhee----EEeccCCcc-------------------
Confidence 9999999999987 6799999999999999999999999875433221 111111100
Q ss_pred CCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 253 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
--..+..+++.++-||+.||+..|..||++.++|.|
T Consensus 329 ---~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 329 ---HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred ---cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 011223457889999999999999999999999988
No 357
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.8e-41 Score=309.20 Aligned_cols=243 Identities=26% Similarity=0.380 Sum_probs=192.2
Q ss_pred eeeeecCcEEEEEEEECCCCc--EEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
+.||+|+||.||+|++..++. .+++|.+..... ......+.+|+.++.++ .||||+++++++...+.+|+||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 468999999999999988776 468887763221 22234567899999999 79999999999999999999999998
Q ss_pred -cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948 95 -TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 95 -g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a 158 (397)
|+|.+++.+.. ..+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 68888886532 24789999999999999999999999999999999999999999999999998
Q ss_pred eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
....... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||.+.+..+....+.....
T Consensus 160 ~~~~~~~-~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-------- 229 (270)
T cd05047 160 RGQEVYV-KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-------- 229 (270)
T ss_pred cccchhh-hccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC--------
Confidence 6432111 1111223456999999865 568999999999999999996 9999987665554444321100
Q ss_pred CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......++.++.+|+.+||..||.+|||+.+++.
T Consensus 230 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 230 -------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred -------------------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 0011234788999999999999999999999985
No 358
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=6.8e-41 Score=307.88 Aligned_cols=249 Identities=21% Similarity=0.296 Sum_probs=191.1
Q ss_pred eeeeecCcEEEEEEEECC--CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 18 EVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
+.||+|+||+||+|.... ....+|+|.+..... ......+.+|+.+++.++|+||+++++.+.+...+|+||||+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 368999999999996432 345688887654322 2223356789999999999999999999999999999999998
Q ss_pred cCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC--cc
Q 015948 95 TDLETVIRNTNI----FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RF 168 (397)
Q Consensus 95 g~L~~~~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~--~~ 168 (397)
|+|.+++..... ..++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 588888766432 246778899999999999999999999999999999999999999999999875432211 11
Q ss_pred cccccCceeeChhcccC------ccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 169 THQVFARWYRAPELLFG------AKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~------~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
....++..|+|||++.. ...++.++|||||||++|||++ |.+||....+.+.+..+........+.
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------- 232 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK------- 232 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC-------
Confidence 22334567999999743 2356889999999999999998 788998877776666554432211111
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......++..+.+++..|+ .||++|||++++++
T Consensus 233 ---------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 233 ---------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ---------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 1112345788899999998 59999999999976
No 359
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.9e-41 Score=310.56 Aligned_cols=238 Identities=19% Similarity=0.254 Sum_probs=186.6
Q ss_pred eeeecCcEEEEEEEECCC------------------------CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee
Q 015948 19 VLGEGTYGVVYKAIDTKT------------------------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~~~~------------------------~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv 74 (397)
.||+|+||.||+|....+ ...+++|++..... .....+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCee
Confidence 689999999999974321 23588888754321 2234567899999999999999
Q ss_pred EEEeeeecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-----
Q 015948 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG----- 148 (397)
Q Consensus 75 ~l~~~~~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~----- 148 (397)
++++++..+...|+||||++| +|...+.+....+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence 999999999999999999995 66666666566789999999999999999999999999999999999997654
Q ss_pred --cEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHH
Q 015948 149 --QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIF 225 (397)
Q Consensus 149 --~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~ 225 (397)
.+||+|||++...... ....++..|+|||.+.+...++.++|||||||++|||+ +|.+||.+....+.... .
T Consensus 160 ~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-Y 234 (274)
T ss_pred cceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-H
Confidence 3899999998654322 22345667999999876566899999999999999995 68999987655443221 1
Q ss_pred HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.... ......+.++.++|.+||+.+|++|||+.+++++
T Consensus 235 ~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 235 EKKH----------------------------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred Hhcc----------------------------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 1100 0011235689999999999999999999999874
No 360
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.2e-40 Score=308.64 Aligned_cols=265 Identities=22% Similarity=0.349 Sum_probs=196.1
Q ss_pred cceeeeeeeeecCcEEEEEEE----ECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee--cCCe
Q 015948 12 DRYLKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGN 85 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~ 85 (397)
++|++.+.||+|+||+||+|. +..++..||+|.+.... ......+.+|+++++.++||||+++++++. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 589999999999999999997 45678899999986432 222345678999999999999999998764 3457
Q ss_pred EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
+|+||||++ |+|.+++.+....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 899999997 6888888766666899999999999999999999999999999999999999999999999999876432
Q ss_pred CCcc---cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 165 DRRF---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 165 ~~~~---~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
.... ....++..|+|||++.+ ..++.++|||||||++|||++|..++...... .. ...+...... ..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~----~~~~~~~~~~----~~ 231 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FM----RMMGNDKQGQ----MI 231 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hh----hhcccccccc----cc
Confidence 2211 11223445999999876 56889999999999999999987665433211 10 0001000000 00
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....+ .............++.++.+||.+||..+|++|||+.++++
T Consensus 232 ~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 232 VYHLIE--LLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred hHHHHH--HHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 000000 00000001122456789999999999999999999999976
No 361
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=7.9e-41 Score=309.23 Aligned_cols=251 Identities=20% Similarity=0.294 Sum_probs=199.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec-CCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~ 85 (397)
.++|.+.+.||+|+||.||+|.+.. ++..|++|.+.... .......+.+|+.+++.++|+||+++++++.. +..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 5789999999999999999999876 35789999876332 22233456789999999999999999998655 577
Q ss_pred EEEEEEccc-cCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948 86 LHLVFEFME-TDLETVIRNTN-------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~ 157 (397)
.++++||+. |+|..++.... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence 899999998 68888776532 3489999999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCCc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948 158 ARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPS 234 (397)
Q Consensus 158 a~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~ 234 (397)
++.+...... .....++..|+|||++.+ ..++.++|||||||++||+++ |.+||...+..+....+..... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~- 238 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR---L- 238 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC---C-
Confidence 9865332211 112234556999999876 568999999999999999998 9999987765544333222100 0
Q ss_pred CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....+++++.+++.+||..||++|||+.++++
T Consensus 239 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 239 -----------------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred -----------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 001134788999999999999999999999985
No 362
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.7e-41 Score=310.96 Aligned_cols=266 Identities=21% Similarity=0.336 Sum_probs=197.2
Q ss_pred cceeeeeeeeecCcEEEEEEEE----CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecC--Ce
Q 015948 12 DRYLKREVLGEGTYGVVYKAID----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GN 85 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~ 85 (397)
.-|++.+.||+|+||.||+|+. ..++..||+|.+..... ......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3478999999999999999974 45788999999864432 22334677899999999999999999998775 57
Q ss_pred EEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
.|+||||++ ++|..++.+....+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||+++.....
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 899999997 5788877665556899999999999999999999999999999999999999999999999999876443
Q ss_pred CCc---ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 165 DRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 165 ~~~---~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
... .....++..|+|||++.+ ..++.++|||||||++|+|+++..++..... .. ....+.... .+.
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~~-~~~---- 231 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTHG-QMT---- 231 (284)
T ss_pred ccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhcccccc-ccc----
Confidence 221 123345567999999876 4688999999999999999998765432111 00 000000000 000
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
...... .............++..+.+||.+||+.||.+|||+.+++++
T Consensus 232 ~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 232 VTRLVR--VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHHHH--HHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 000000 000000011234568999999999999999999999999863
No 363
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.6e-40 Score=305.54 Aligned_cols=249 Identities=20% Similarity=0.259 Sum_probs=190.2
Q ss_pred eeeeecCcEEEEEEEEC--CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 18 EVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
+.||+|+||.||+|... .++..+|+|.++..... .....+.+|+.+++.++||||+++++++.+...+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 46899999999999754 35568999988654322 122357789999999999999999999999999999999998
Q ss_pred cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc--c
Q 015948 95 TDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR--F 168 (397)
Q Consensus 95 g~L~~~~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~--~ 168 (397)
|+|.+++.... ...+...+..++.|++.||.|||++|++||||||+||+++.++++||+|||+++........ .
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 68888876532 23567788899999999999999999999999999999999999999999999764332211 1
Q ss_pred cccccCceeeChhcccCc------cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 169 THQVFARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~------~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
....++..|+|||++.+. ..++.++|||||||++|||++ |.+||......+.............+.
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------- 232 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK------- 232 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC-------
Confidence 233456779999998542 135789999999999999996 999998766555433322211110000
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.......++.+.+++.+|+ .+|++|||+++|+.
T Consensus 233 ---------------~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 233 ---------------PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred ---------------CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 0111234778999999998 68999999999974
No 364
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7.7e-41 Score=313.06 Aligned_cols=251 Identities=21% Similarity=0.341 Sum_probs=198.8
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
.++|++.+.||+|+||.||+|.+..+|. .+|+|.+..... ......+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 5678999999999999999999887776 468887754322 22233567899999999999999999998654 57
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
++++||+. |+|.+.+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence 78999998 68888887766668999999999999999999999999999999999999999999999999998764332
Q ss_pred Cc--ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 166 RR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ~~--~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. .....++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+. ..+.......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~----------- 230 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLEKGERL----------- 230 (303)
T ss_pred cccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHCCCCC-----------
Confidence 21 222334567999999876 568999999999999999997 8889877643332 2222210000
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
...+..+.++.+++.+|+..+|++||+++++++.
T Consensus 231 ---------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 231 ---------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112346789999999999999999999998874
No 365
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.1e-40 Score=305.18 Aligned_cols=244 Identities=21% Similarity=0.317 Sum_probs=190.2
Q ss_pred eeeeecCcEEEEEEEECC---CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeee-cCCeEEEEEEcc
Q 015948 18 EVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-HKGNLHLVFEFM 93 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~~~~lv~e~~ 93 (397)
+.||+|+||.||+|.+.. .+..+|+|.+..... ......+.+|+.+++.++||||+++++++. .++..|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 468999999999998643 345799998753221 122345678999999999999999999764 566789999999
Q ss_pred c-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----Ccc
Q 015948 94 E-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----RRF 168 (397)
Q Consensus 94 ~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~----~~~ 168 (397)
. |+|..++.+....++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++...... ...
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 8 68888887765567888889999999999999999999999999999999999999999999997653321 111
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||...+..+....+.... . +
T Consensus 160 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~---~---~----------- 221 (262)
T cd05058 160 TGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR---R---L----------- 221 (262)
T ss_pred ccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC---C---C-----------
Confidence 22334567999999876 568899999999999999999 567887766555443332210 0 0
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++..+.+++.+||..+|++||++.++++
T Consensus 222 ----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 222 ----------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred ----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 001124688999999999999999999999986
No 366
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.2e-41 Score=303.64 Aligned_cols=228 Identities=22% Similarity=0.316 Sum_probs=186.1
Q ss_pred cCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHH
Q 015948 23 GTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVI 101 (397)
Q Consensus 23 G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~ 101 (397)
|.||.||+|+++.+++.||+|.++.... ..+|...+....||||+++++++.+...+|+||||++ |+|.+.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 8999999999999999999999875431 2245555666679999999999999999999999998 5788877
Q ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChh
Q 015948 102 RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181 (397)
Q Consensus 102 ~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE 181 (397)
.+.. .+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+...... .....++..|+|||
T Consensus 77 ~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE 152 (237)
T cd05576 77 SKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPE 152 (237)
T ss_pred HHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCc
Confidence 6644 4899999999999999999999999999999999999999999999999988765432 22334566799999
Q ss_pred cccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCC
Q 015948 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP 261 (397)
Q Consensus 182 ~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (397)
.+.+ ..++.++|+||+||++|||++|..+|....... ... ....+.+
T Consensus 153 ~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------------~~~---------------~~~~~~~ 199 (237)
T cd05576 153 VGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------------NTH---------------TTLNIPE 199 (237)
T ss_pred ccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------------ccc---------------cccCCcc
Confidence 9865 557889999999999999999998765331100 000 0001223
Q ss_pred CCCHHHHHHHHHhcCcCCCCCCCH-----HHHhcCCCC
Q 015948 262 SASDDALDLLSKMFTYDPKARITA-----QQALEHRYF 294 (397)
Q Consensus 262 ~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~ 294 (397)
.+++.+++||.+||+.||++|+++ +++++||||
T Consensus 200 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 200 WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 458899999999999999999985 999999997
No 367
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.9e-40 Score=302.32 Aligned_cols=242 Identities=24% Similarity=0.398 Sum_probs=197.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|++.+.||+|+||.||++. .+++.||+|.+.... ....+.+|+.+++.++||||+++++++..+ ..|+||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 4679999999999999999985 578899999985432 234677899999999999999999998665 479999
Q ss_pred Eccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 91 EFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
||+. |+|..++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 9998 58888887653 358899999999999999999999999999999999999999999999999997643221
Q ss_pred cccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccc
Q 015948 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (397)
Q Consensus 169 ~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
.....+..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...+..+....+......
T Consensus 155 ~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------- 216 (254)
T cd05083 155 DNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM----------------- 216 (254)
T ss_pred CCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC-----------------
Confidence 12233456999999865 568899999999999999997 99999877665544443221100
Q ss_pred cccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 248 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.....++..+.+|+.+||..+|.+||+++++++
T Consensus 217 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 217 ----------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred ----------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011245789999999999999999999999875
No 368
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.9e-40 Score=304.78 Aligned_cols=251 Identities=26% Similarity=0.441 Sum_probs=202.4
Q ss_pred ceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCcc--------CCccchHHHHHHHHHh-cCCCCeeEEEeeeec
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQK--------EGVNFTALREIKLLKE-LKSPHIIELIDAFPH 82 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~--------~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~ 82 (397)
.|.+.+.||+|+||.||+|.+.. +++.+|+|.+...... ......+.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 6789999988653311 1122345678888865 799999999999999
Q ss_pred CCeEEEEEEcccc-CHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCcEEEeeecc
Q 015948 83 KGNLHLVFEFMET-DLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (397)
Q Consensus 83 ~~~~~lv~e~~~g-~L~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~~kl~DFG~ 157 (397)
++..|+||||++| +|.+.+. .....+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999985 6766653 344568999999999999999999996 7899999999999999999999999999
Q ss_pred ceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 158 a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
+....... ......++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+.......+........
T Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----- 233 (269)
T cd08528 161 AKQKQPES-KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL----- 233 (269)
T ss_pred eeeccccc-ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC-----
Confidence 98765443 3445567888999999976 5589999999999999999999999987665554444432211000
Q ss_pred CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.....++++.+||.+||+.||++||++.|+.++
T Consensus 234 ---------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 234 ---------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ---------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 001347899999999999999999999998764
No 369
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-41 Score=315.91 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=199.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC-eEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NLHLV 89 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-~~~lv 89 (397)
.++|.-...||+|+||.||+|.-.. |..||||.+....... ...+.+|+.+|.+++|||+|+|+++|.+.+ ..+||
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 5778888999999999999998654 4899999776544332 345899999999999999999999999888 59999
Q ss_pred EEccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCC---ccccCCCCCcEEEccCCcEEEeeeccceeeCCC
Q 015948 90 FEFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKW---VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~---ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
+||+. |+|.+.+..... .+++.....|+.+++.||+|||... ||||||||+|||+|++.+.||+|||+|+.....
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 99998 899999988766 7999999999999999999999865 999999999999999999999999999665331
Q ss_pred CCccccc-ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHH-HHHhCCCCCCCCCCCC
Q 015948 165 DRRFTHQ-VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--DIDQLGKI-FAAFGTATPSQWPDLA 240 (397)
Q Consensus 165 ~~~~~~~-~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i-~~~~~~~~~~~~~~~~ 240 (397)
....... .||..|++||.+.. ...+.++||||||++|.||++|+.+.+... ....+... ...+.......+.|.
T Consensus 231 ~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~- 308 (361)
T KOG1187|consen 231 DTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDP- 308 (361)
T ss_pred ccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCC-
Confidence 2222222 78999999999865 568999999999999999999998877542 11111111 112111111122211
Q ss_pred CCccccccccccCCCcc-ccCC--CCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 241 YLPDYVEYQYVAAPPLR-SLFP--SASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~~~--~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.+. ..++ ..-..+..+..+|++.+|.+||++.|+++
T Consensus 309 --------------~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 309 --------------RLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred --------------CccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 111 0111 01123667888999999999999999765
No 370
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.8e-40 Score=303.00 Aligned_cols=236 Identities=19% Similarity=0.267 Sum_probs=187.0
Q ss_pred eeeeecCcEEEEEEEECCCC----------cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 18 EVLGEGTYGVVYKAIDTKTG----------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~----------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
+.||+|+||.||+|.+..++ ..+++|.+...... ...+.+|+.+++.++||||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 47899999999999998776 34777776533221 4567789999999999999999999887 7789
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-------cEEEeeeccce
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-------QLKLADFGLAR 159 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-------~~kl~DFG~a~ 159 (397)
+||||+. |+|..++......++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||++.
T Consensus 77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 9999998 577777766554689999999999999999999999999999999999999888 79999999998
Q ss_pred eeCCCCCcccccccCceeeChhcccCc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCC
Q 015948 160 IFGSPDRRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (397)
Q Consensus 160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~-~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 237 (397)
.... .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+........ .. . ..+
T Consensus 157 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~-~~---~--~~~- 225 (259)
T cd05037 157 TVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY-QD---Q--HRL- 225 (259)
T ss_pred cccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH-hc---C--CCC-
Confidence 7543 1223455669999998764 368899999999999999998 57777665432222111 10 0 000
Q ss_pred CCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.......+.++|.+||..+|.+|||+.++++
T Consensus 226 ----------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 226 ----------------------PMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----------------------CCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0011378999999999999999999999986
No 371
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.2e-40 Score=304.29 Aligned_cols=252 Identities=19% Similarity=0.335 Sum_probs=201.7
Q ss_pred cceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
++|++.+.||+|+||+||+|+.+. +.+.+++|.+..... ......+.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 689999999999999999998754 346799998754322 11334577899999999999999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948 87 HLVFEFME-TDLETVIRNTN--------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~--------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~ 157 (397)
|+||||++ |+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence 99999998 68888876543 1589999999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCC-CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948 158 ARIFGSPD-RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (397)
Q Consensus 158 a~~~~~~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 235 (397)
+....... .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+..+......+.... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~-----~~ 237 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK-----LE 237 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC-----cC
Confidence 87543222 12233455667999999866 457889999999999999998 788887766555444432210 00
Q ss_pred CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
|+ ....++..+.+++.+||..||.+||++.+++.+
T Consensus 238 ~~---------------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 238 LP---------------------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC---------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 10 112347899999999999999999999999864
No 372
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.9e-40 Score=304.68 Aligned_cols=244 Identities=25% Similarity=0.402 Sum_probs=194.9
Q ss_pred eeeeecCcEEEEEEEECCCC------cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 18 EVLGEGTYGVVYKAIDTKTG------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
+.||+|+||.||+|++.... ..+|+|.+..... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 46899999999999876443 6899998864322 2234467789999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-----cEEEeeeccce
Q 015948 92 FME-TDLETVIRNT------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-----QLKLADFGLAR 159 (397)
Q Consensus 92 ~~~-g~L~~~~~~~------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-----~~kl~DFG~a~ 159 (397)
|++ |+|...+... ...+++..+..++.||+.||.|||+++++|+||||+||+++.++ .++|+|||++.
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 998 5888887652 23478899999999999999999999999999999999999887 89999999997
Q ss_pred eeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCC
Q 015948 160 IFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (397)
Q Consensus 160 ~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 236 (397)
....... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------- 231 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR------- 231 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc-------
Confidence 6533221 1122334567999999976 458999999999999999998 9999987766555444321100
Q ss_pred CCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
......++..+.+||.+||..+|.+||++.++++
T Consensus 232 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 232 --------------------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred --------------------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0112345789999999999999999999999875
No 373
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-42 Score=328.44 Aligned_cols=269 Identities=26% Similarity=0.333 Sum_probs=199.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC------e
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------N 85 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------~ 85 (397)
.-+...+.||+|+||.||+++++.+|+.||||.++.... ....+...+|+++|++|+|+|||++++.-++.. .
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 456778999999999999999999999999999987542 223445678999999999999999998865543 5
Q ss_pred EEEEEEccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--CCc--EEEeeeccc
Q 015948 86 LHLVFEFME-TDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HGQ--LKLADFGLA 158 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--~~~--~kl~DFG~a 158 (397)
..+|||||. |+|...+.+. ...|++.++..++..+..||.|||++||+||||||+||++-. +|+ -||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 679999998 6888888764 335999999999999999999999999999999999999853 343 799999999
Q ss_pred eeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCC
Q 015948 159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (397)
Q Consensus 159 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 238 (397)
+.+.+. ..+...+||+.|.+||++...+.|+..+|.|||||++|+++||..||...........++....+..+....-
T Consensus 172 rel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 172 RELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred ccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 988654 4888999999999999997557899999999999999999999998876544322222222222222221110
Q ss_pred --CCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC
Q 015948 239 --LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283 (397)
Q Consensus 239 --~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ 283 (397)
......-+.+....+. ...+.+.+-.-+-..+..+|..+|++|.
T Consensus 251 ~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQ-PNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeecccCCceeeeccCCC-cccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 0000001111111111 1122222223345678889999999998
No 374
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.6e-40 Score=304.46 Aligned_cols=250 Identities=23% Similarity=0.321 Sum_probs=196.2
Q ss_pred eeeeeeeeecCcEEEEEEEEC---CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCC------
Q 015948 14 YLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------ 84 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------ 84 (397)
|.+.+.||+|+||.||+|... .++..||||++............+.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 678899999999999999864 35789999998765444444456778999999999999999999875432
Q ss_pred eEEEEEEccc-cCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948 85 NLHLVFEFME-TDLETVIRNT-----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~-----~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a 158 (397)
..++++||+. |+|..++... ...++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 3478899998 6776665432 124788999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCC--cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948 159 RIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (397)
Q Consensus 159 ~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 235 (397)
+....... ......++..|++||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 233 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR------ 233 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc------
Confidence 87543221 1122334566999999866 567889999999999999998 8899987765554443332100
Q ss_pred CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
....+..+..+.+++.+||..+|++||++.+++++
T Consensus 234 ---------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 234 ---------------------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred ---------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00112347899999999999999999999999863
No 375
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5e-40 Score=304.09 Aligned_cols=255 Identities=21% Similarity=0.337 Sum_probs=199.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC----CCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec--CC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~ 84 (397)
.++|.+.+.||+|+||.||+|... .+++.||+|++...... .....+.+|+++++.++|+||+++++++.. ..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 357889999999999999999854 34789999998754432 234567889999999999999999999877 56
Q ss_pred eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
..|+||||++ |+|..++......++...+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 8999999997 588888877665699999999999999999999999999999999999999999999999999987653
Q ss_pred CCCccc---ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHH-----------HHHHHHHhC
Q 015948 164 PDRRFT---HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-----------LGKIFAAFG 229 (397)
Q Consensus 164 ~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-----------~~~i~~~~~ 229 (397)
...... ...++..|+|||.+.+ ..++.++|+|||||++|||++|..||........ ...+...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 222111 1233455999999876 4688999999999999999999988765422110 111111100
Q ss_pred CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.. .........+.++.+|+.+||..+|++|||+.|+++
T Consensus 241 ~~-----------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 241 EG-----------------------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cC-----------------------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00 000111234688999999999999999999999986
No 376
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-41 Score=319.14 Aligned_cols=250 Identities=21% Similarity=0.341 Sum_probs=206.8
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCc---E-EEEEEeecCC-ccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQ---T-VAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~-~aiK~i~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 86 (397)
++-.+.++||+|+||.||+|.-+..+. . ||+|...... ........+++|+++++.++|||||++|++...+..+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344556899999999999998765432 3 8999887532 3444556788999999999999999999999999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
|+|||+|. |+|.+++++....++..+...++.+.+.||+|||+++++||||-..|+|++.++.+||+|||+++... ..
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~-~~ 315 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS-QY 315 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc-ce
Confidence 99999998 58999999887779999999999999999999999999999999999999999999999999987543 11
Q ss_pred Cccc-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH-hCCCCCCCCCCCCCC
Q 015948 166 RRFT-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA-FGTATPSQWPDLAYL 242 (397)
Q Consensus 166 ~~~~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~ 242 (397)
.... ..-....|+|||.+.. ..|+.++|||||||++||+++ |..||.+....+...+|... .....+
T Consensus 316 ~~~~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--------- 385 (474)
T KOG0194|consen 316 VMKKFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP--------- 385 (474)
T ss_pred eeccccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC---------
Confidence 1111 1112345999999976 479999999999999999997 88999999999988888443 222111
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
...+.++..++.+|+..||++|+++.++.+
T Consensus 386 ------------------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 386 ------------------SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ------------------CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 133678999999999999999999998875
No 377
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.7e-40 Score=331.08 Aligned_cols=270 Identities=24% Similarity=0.368 Sum_probs=182.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCC----CcEEEEEEeecCCccCCccchHHHHHHHHHhc---CCCCeeEEEee---
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKT----GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDA--- 79 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~----~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~--- 79 (397)
-.++|.+.+.||+|+||.||+|++..+ +..||+|++..... .|+.+...+ .+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---------~e~~~~e~l~~~~~~~~~~~~~~~~~ 200 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---------VEIWMNERVRRACPNSCADFVYGFLE 200 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---------hHHHHHHHHHhhchhhHHHHHHhhhc
Confidence 357899999999999999999999988 89999998753211 122222222 22223222222
Q ss_pred ---eecCCeEEEEEEccc-cCHHHHHHhcCCC-------------------CCHHHHHHHHHHHHHHHHHhHhCCccccC
Q 015948 80 ---FPHKGNLHLVFEFME-TDLETVIRNTNIF-------------------LSPADIKSYMQMTLKGLAFCHKKWVLHRD 136 (397)
Q Consensus 80 ---~~~~~~~~lv~e~~~-g~L~~~~~~~~~~-------------------l~~~~~~~~~~qil~aL~~lH~~~ivHrD 136 (397)
...+..+++|+||++ ++|.+++...... .....+..++.||+.||.|||++||+|||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD 280 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD 280 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence 245668999999998 5777777654321 12345678999999999999999999999
Q ss_pred CCCCcEEEcc-CCcEEEeeeccceeeCCC-CCcccccccCceeeChhcccCcc---------------------CCCCcc
Q 015948 137 MKPNNLLIGS-HGQLKLADFGLARIFGSP-DRRFTHQVFARWYRAPELLFGAK---------------------QYGAGV 193 (397)
Q Consensus 137 lkp~NILl~~-~~~~kl~DFG~a~~~~~~-~~~~~~~~~t~~y~aPE~l~~~~---------------------~~~~~~ 193 (397)
|||+|||++. ++.+||+|||+|+.+... .......++++.|+|||++.... .++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999986 589999999999865332 22334567888999999764321 234567
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc---ccCCCCCHHHHHH
Q 015948 194 DVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR---SLFPSASDDALDL 270 (397)
Q Consensus 194 DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~l 270 (397)
|||||||+||||+++.. ...++...+..++...+... ..|... ... ...+... .+....+..+++|
T Consensus 361 DVwSlGviL~el~~~~~--~~~~~~~~~~~~l~~~~~~~-~~~~~~------~~~--~~~~~~~~~~~~~d~~~~~~~dL 429 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNL--RSDSNLIQFNRQLKRNDYDL-VAWRKL------VEP--RASPDLRRGFEVLDLDGGAGWEL 429 (566)
T ss_pred ccHHHHHHHHHHHhCcC--CCchHHHHHHHHHHhcCCcH-HHHHHh------hcc--ccchhhhhhhhhccccchHHHHH
Confidence 99999999999998654 34444445544444322110 001000 000 0000001 1112224567799
Q ss_pred HHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 271 LSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 271 i~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
|.+||++||++|||+.|+|+||||.....
T Consensus 430 i~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 430 LKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred HHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 99999999999999999999999987543
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-39 Score=299.64 Aligned_cols=249 Identities=20% Similarity=0.231 Sum_probs=189.7
Q ss_pred eeeeecCcEEEEEEEECCC--CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-
Q 015948 18 EVLGEGTYGVVYKAIDTKT--GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME- 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~- 94 (397)
+.||+|+||+||+|..... ...+++|.+..... ......+.+|+.+++.++||||+++++.+......|+||||+.
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 3699999999999975433 23466666554322 1223467889999999999999999999999999999999999
Q ss_pred cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC--Cccc
Q 015948 95 TDLETVIRNTN---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFT 169 (397)
Q Consensus 95 g~L~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~--~~~~ 169 (397)
|+|..++.+.. ..+++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||++....... ....
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 58888886532 236677888999999999999999999999999999999999999999999986432211 1123
Q ss_pred ccccCceeeChhcccCc------cCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 170 HQVFARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~------~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
...++..|+|||++... ..++.++|||||||++|||++ |.+||...++.+.+..+........+.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 231 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK-------- 231 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC--------
Confidence 44567789999997431 235788999999999999996 578888777776666654431111000
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.......++.+.+++..|+ .+|.+||+++++++
T Consensus 232 --------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 232 --------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred --------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0111234788999999999 68999999999975
No 379
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-40 Score=333.75 Aligned_cols=251 Identities=25% Similarity=0.378 Sum_probs=212.0
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.+.-++.+.||+|+||.||.|...... ..||||.+..... ......|++|..+|+.++|||||++++.+-+.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 556788999999999999999765432 3499998876533 3345578999999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948 86 LHLVFEFME-TDLETVIRNT------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~------~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a 158 (397)
.+|++|||+ |||+.++++. ...++..+...++.+|++|+.||+++++|||||-..|+||+....+||+|||+|
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchh
Confidence 999999998 7999999998 667999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCccccccc--CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCC
Q 015948 159 RIFGSPDRRFTHQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (397)
Q Consensus 159 ~~~~~~~~~~~~~~~--t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 235 (397)
+.+...+....+..+ ..-|||||.+.. ..++.++|||||||+|||+++ |..||.+.++.+.+.-..+.-....|.
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~- 927 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPS- 927 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCC-
Confidence 954333322222222 234999999986 579999999999999999997 899999999999888766654333333
Q ss_pred CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.+++.+.+++..||+.+|++||+...|++
T Consensus 928 --------------------------~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 928 --------------------------YCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred --------------------------CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 34678889999999999999999999987
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-40 Score=322.68 Aligned_cols=265 Identities=28% Similarity=0.397 Sum_probs=218.7
Q ss_pred ccChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee--
Q 015948 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP-- 81 (397)
Q Consensus 5 ~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~-- 81 (397)
+....=.+.|+|.+.||.|.+|.||+++++++++..|+|+...... ..+.+..|.+||+.+ .|||++.++++|.
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 3344447789999999999999999999999999999999865433 334566789999988 5799999999983
Q ss_pred ---cCCeEEEEEEcccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948 82 ---HKGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG 156 (397)
Q Consensus 82 ---~~~~~~lv~e~~~g-~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG 156 (397)
.++.+|||||||+| +.-++++.. +..+.|..+..|++.++.||.+||.+.++|||||-.|||++.+|.|||+|||
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeee
Confidence 35689999999995 555555443 4569999999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCCcccccccCceeeChhcccCcc----CCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Q 015948 157 LARIFGSPDRRFTHQVFARWYRAPELLFGAK----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT 232 (397)
Q Consensus 157 ~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 232 (397)
.+..+...-....+.+||++|||||++.... .|+.++|+||||++..||.-|.||+-+......+-.|
T Consensus 169 vSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I-------- 240 (953)
T KOG0587|consen 169 VSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-------- 240 (953)
T ss_pred eeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC--------
Confidence 9999988888888999999999999996533 3788999999999999999999998766543322211
Q ss_pred CCCCCCCCCCccccccccccCCCc-cccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCC
Q 015948 233 PSQWPDLAYLPDYVEYQYVAAPPL-RSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAP 298 (397)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 298 (397)
...|+. -..+...+..+.+||..||.+|-.+||+..++|+|||.+..+
T Consensus 241 ------------------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 241 ------------------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred ------------------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence 111221 122345589999999999999999999999999999998443
No 381
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-40 Score=327.93 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=210.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC-----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
..+-+..+.||+|+||+||+|+-.. ....||||.++... .......|.||+.+|..|+|||||+|++.+..++-
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3456778999999999999997543 33579999987543 22355678999999999999999999999999999
Q ss_pred EEEEEEccc-cCHHHHHHhcCC-------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948 86 LHLVFEFME-TDLETVIRNTNI-------------FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (397)
Q Consensus 86 ~~lv~e~~~-g~L~~~~~~~~~-------------~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k 151 (397)
+|+|+|||. |||.++++.... +|+..+...|+.||+.|++||-++.+|||||-..|+||+++-.||
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence 999999999 999999976432 288889999999999999999999999999999999999999999
Q ss_pred EeeeccceeeCCCC-Cccc-ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHh
Q 015948 152 LADFGLARIFGSPD-RRFT-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228 (397)
Q Consensus 152 l~DFG~a~~~~~~~-~~~~-~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~ 228 (397)
|+|||+++..-+.+ .... ...-...|||||.+.. ..|+.++||||+||+|||+++ |..|+.+.++.++++.|.++-
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~ 722 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ 722 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC
Confidence 99999999764433 2222 3333456999999976 459999999999999999996 899999999999999987653
Q ss_pred CCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 289 (397)
.... +...+.++.+|+..|++.+|++||+..||=
T Consensus 723 lL~~---------------------------Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 723 LLSC---------------------------PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cccC---------------------------CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 3222 234578999999999999999999999974
No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=295.44 Aligned_cols=266 Identities=21% Similarity=0.331 Sum_probs=209.0
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHH-HhcCCCCeeEEEeeeecCCeE
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLL-KELKSPHIIELIDAFPHKGNL 86 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~l~~~~~~~~~~ 86 (397)
....++.+-+..||.|+||+|++..++.+|+..|||.|+.... +....+++.|.+.. +.-+.||||++|++.-.++..
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc 138 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC 138 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence 3345666678899999999999999999999999999987655 22334566677654 445689999999998889999
Q ss_pred EEEEEccccCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 87 HLVFEFMETDLETVIRN----TNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 87 ~lv~e~~~g~L~~~~~~----~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
||.||.|.-++..+.+. ++..++|..+-.+....+.||+||... .|||||+||+|||++..|.+||||||++-.+
T Consensus 139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 99999999776555432 344589999999999999999999865 7999999999999999999999999998765
Q ss_pred CCCCCcccccccCceeeChhcccCcc-CCCCcchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCCC
Q 015948 162 GSPDRRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDL 239 (397)
Q Consensus 162 ~~~~~~~~~~~~t~~y~aPE~l~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 239 (397)
.. ...-+...|.+.|||||.+.... .|+.++|+||||++|||+.||..|+.+-+. .+++.++..+ .+|.-..+.
T Consensus 219 v~-SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~g---dpp~l~~~~ 294 (361)
T KOG1006|consen 219 VD-SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIG---DPPILLFDK 294 (361)
T ss_pred HH-HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcC---CCCeecCcc
Confidence 33 22344567778899999996533 599999999999999999999999887544 3444444332 222111111
Q ss_pred CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
.--..|..+..||..||.+|-..||...+++++||+...
T Consensus 295 -------------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 295 -------------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred -------------------cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence 111348899999999999999999999999999998753
No 383
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.8e-38 Score=306.71 Aligned_cols=271 Identities=25% Similarity=0.394 Sum_probs=186.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEEC----------------CCCcEEEEEEeecCCcc------------CCccchHHHHH
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDT----------------KTGQTVAIKKIRLGKQK------------EGVNFTALREI 62 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~----------------~~~~~~aiK~i~~~~~~------------~~~~~~~~~E~ 62 (397)
.++|.+.++||+|+||+||+|... ..++.||||.+...... ....+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 678999999999999999999752 24567999998653321 11122344578
Q ss_pred HHHHhcCCCCe-----eEEEeeeec--------CCeEEEEEEccc-cCHHHHHHhcC-----------------------
Q 015948 63 KLLKELKSPHI-----IELIDAFPH--------KGNLHLVFEFME-TDLETVIRNTN----------------------- 105 (397)
Q Consensus 63 ~~l~~l~hp~i-----v~l~~~~~~--------~~~~~lv~e~~~-g~L~~~~~~~~----------------------- 105 (397)
.++.+++|.++ ++++++|.. ++..++||||++ |+|.+++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 88888877654 566666642 356899999998 57777765321
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC-cccccccCceeeChhccc
Q 015948 106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRAPELLF 184 (397)
Q Consensus 106 ~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~t~~y~aPE~l~ 184 (397)
..++...++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++........ ......+++.|+|||++.
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 1245677889999999999999999999999999999999999999999999976543221 112233478899999985
Q ss_pred CccC-------------------CC--CcchHHHHHHHHHHHHhCCC-CCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 185 GAKQ-------------------YG--AGVDVWAAGCIFAELLNRRP-FLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 185 ~~~~-------------------~~--~~~DiwSlG~il~ell~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.... |+ .+.|+||+||++|+|++|.. +|.+...... ........ ...|...
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~---~~~~~~~~-~~~~r~~--- 456 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT---ELRQYDND-LNRWRMY--- 456 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh---HHhhccch-HHHHHhh---
Confidence 4211 22 24799999999999999874 6643221110 00000000 0000000
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCC---CCCCCHHHHhcCCCCCC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDP---KARITAQQALEHRYFSS 296 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP---~~R~t~~e~l~hp~~~~ 296 (397)
......-..+...++.++||+.+||..+| .+|+|++|+|+||||..
T Consensus 457 --------~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 457 --------KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred --------cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00000012344568999999999999876 68999999999999953
No 384
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=5.8e-39 Score=292.71 Aligned_cols=281 Identities=32% Similarity=0.541 Sum_probs=216.8
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECC---CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK 83 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~ 83 (397)
..+.+.|.+.++||.|.|++||+|.+.. .+++||+|.+....... ++.+|+++|..+ .+.||+++.+++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~----ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS----RILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCch----HHHHHHHHHHHhccchhhhcchhhhccC
Confidence 4568899999999999999999998877 78899999987654433 577999999999 479999999999999
Q ss_pred CeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceee
Q 015948 84 GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIF 161 (397)
Q Consensus 84 ~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~ 161 (397)
+++.+|+||++. +-.+++.. ++...++.|++.++.||.++|.+|||||||||.|+|.+.. +.-.|+|||+|...
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred CeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 999999999995 45555544 7789999999999999999999999999999999999854 77899999999621
Q ss_pred C----------------CC----------------------------CCcccccccCceeeChhcccCccCCCCcchHHH
Q 015948 162 G----------------SP----------------------------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197 (397)
Q Consensus 162 ~----------------~~----------------------------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwS 197 (397)
. .+ ........||++|+|||+++.+..-+.++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 0 00 001124567899999999999888899999999
Q ss_pred HHHHHHHHHhCC-CCCCCCCcHHHHHHHHHHhCCCCCCCCC---CC------C---CCccc-ccccccc-------CC--
Q 015948 198 AGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWP---DL------A---YLPDY-VEYQYVA-------AP-- 254 (397)
Q Consensus 198 lG~il~ell~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~---~~------~---~~~~~-~~~~~~~-------~~-- 254 (397)
.|||+..++++. |+|...++.+.+..|...+|...-+..+ +. . ..++. ..|.... ..
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 999999999876 5677778888888888777742221111 00 0 00000 0011110 00
Q ss_pred -CccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 255 -PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 255 -~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.........+..+.+|+.+||..||.+|+|++++|.||||..
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 111112234568999999999999999999999999999984
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=3e-37 Score=277.77 Aligned_cols=243 Identities=40% Similarity=0.628 Sum_probs=199.7
Q ss_pred CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcccc-CHHHHHH
Q 015948 24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIR 102 (397)
Q Consensus 24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~~~ 102 (397)
+||.||+|.+..+|+.+|+|++........ ...+.+|+..+++++|+||+++++.+......++++||+++ +|...+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 589999999998999999999875543221 45677899999999999999999999999999999999996 8888877
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhc
Q 015948 103 NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182 (397)
Q Consensus 103 ~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~ 182 (397)
.... ++...+..++.+++.++.+||+.|++|+||+|.||+++.++.++|+|||.+....... ......++..|++||.
T Consensus 80 ~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 80 KRGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEV 157 (244)
T ss_pred hccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHH
Confidence 6543 8999999999999999999999999999999999999999999999999998875432 3445667778999999
Q ss_pred ccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCC
Q 015948 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPS 262 (397)
Q Consensus 183 l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (397)
+.+ ..++.++|+||||+++|+|++|..||....+.......... ..... ......
T Consensus 158 ~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~---~~~~~---------------------~~~~~~ 212 (244)
T smart00220 158 LLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK---PKPPF---------------------PPPEWK 212 (244)
T ss_pred Hcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc---cCCCC---------------------cccccc
Confidence 875 55788999999999999999999999874444333332221 11000 000111
Q ss_pred CCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 263 ASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 263 ~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
++.++.+++.+||..+|++||++.++++||||
T Consensus 213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 213 ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 47899999999999999999999999999997
No 386
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=298.75 Aligned_cols=247 Identities=26% Similarity=0.384 Sum_probs=204.1
Q ss_pred ceeeeeeeeecCcEEEEEEEECC--CC--cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTK--TG--QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~--~~--~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
..++.+.||.|.||.||+|.... .| -.||||.-+..... ...+.|+.|..+|+.+.|||||++++.+.+ ...+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-DDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-hhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 34456789999999999997542 23 35899987765443 346789999999999999999999999954 56899
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 167 (397)
|||.+. |.|..++......++......|++||+.||.|||++++|||||-..|||+.+..-+||+|||+++.+.+....
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY 547 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY 547 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence 999999 9999999998888999999999999999999999999999999999999999989999999999988665432
Q ss_pred ccc-cccCceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 168 FTH-QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 168 ~~~-~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
... .-...-|||||.+.= ..++.++|||.|||++||++ .|..||.+-.+.+.+..+-++-.
T Consensus 548 kaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR---------------- 610 (974)
T KOG4257|consen 548 KASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER---------------- 610 (974)
T ss_pred hccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC----------------
Confidence 222 112345999999853 67999999999999999987 49999999888777666544321
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 289 (397)
...++.+++.+..|+.+||.+||.+||...|+.
T Consensus 611 -----------lP~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 611 -----------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred -----------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 133456789999999999999999999987754
No 387
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-38 Score=294.53 Aligned_cols=257 Identities=25% Similarity=0.312 Sum_probs=209.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+...+.++||+|-||.|.+|.-. .+..||+|.++....... ...+.+|+++|.+|+|||||+++++|..++.+++|+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~-r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNA-RNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhH-HHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 567889999999999999999753 368999999986654432 446889999999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCc-
Q 015948 91 EFME-TDLETVIRNTNIFL-SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l-~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~- 167 (397)
||++ |+|.+++.+...+. .-.....++.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++.+-+.+..
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 9999 89999998874433 44556679999999999999999999999999999999999999999999976444322
Q ss_pred -ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH--hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 168 -~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
-...+....|||+|.+.. ..++.++|+|+||+++||++ +...||...++.+..+..-..+.......+
T Consensus 695 vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~-------- 765 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV-------- 765 (807)
T ss_pred eecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee--------
Confidence 222344566999999876 45899999999999999986 467888888887777666554443322221
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
..-++.++..+.+|+.+|+..|-++||+.+++..
T Consensus 766 ------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 766 ------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred ------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 1223345788999999999999999999999854
No 388
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=299.33 Aligned_cols=249 Identities=26% Similarity=0.384 Sum_probs=208.9
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCC-Cc--EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKT-GQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~--~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 87 (397)
.++..+.++||+|+||+|++|.++.. |+ .||||+++...... .-..|++|+.+|.+|+|+|+++||+...+ ..+.
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence 56677889999999999999987653 33 68999998765443 44578999999999999999999999876 6788
Q ss_pred EEEEccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 88 LVFEFME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
+|||+++ |+|++.+++ ....|-......|+.||+.|+.||.++++|||||-..|||+-....|||||||+.+.++...
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999 899999988 45568889999999999999999999999999999999999999999999999999887655
Q ss_pred Ccccccc---cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 166 RRFTHQV---FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 166 ~~~~~~~---~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
..+...- -...|.|||.|.. ..++.++|+|++||++|||++ |..||.|-...+++.+|-+.-....
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpR--------- 336 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPR--------- 336 (1039)
T ss_pred cceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCC---------
Confidence 4432111 1234999999976 569999999999999999997 7899999999988888753322222
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 289 (397)
.+.+|.++.+++..||..+|++|||+..|.
T Consensus 337 ------------------Pk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 337 ------------------PKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred ------------------CCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 223489999999999999999999998875
No 389
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=305.76 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=218.8
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCc---EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
.-.|.++||.|.||.||+|+-+..|+ .||||.++.. ..+.....|+.|+.||-+++||||++|.+......-+.||
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 35788999999999999999877664 6999998765 4456677899999999999999999999999999999999
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cc
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RR 167 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~ 167 (397)
.|||+ |.|..++++.++.|+.-+...+++.|+.|++||-++|+|||||-..||||+.+-.||++|||+++.+.+.. ..
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ 788 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 788 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence 99999 89999999999999999999999999999999999999999999999999999999999999999875444 22
Q ss_pred ccccccC--ceeeChhcccCccCCCCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 015948 168 FTHQVFA--RWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (397)
Q Consensus 168 ~~~~~~t--~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 244 (397)
+++.-|. ..|.|||.+.- ..++.++||||+|+++||.+ .|.-|+-..++.+.+..|.+.+..++|-+
T Consensus 789 ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmD--------- 858 (996)
T KOG0196|consen 789 YTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMD--------- 858 (996)
T ss_pred ccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCC---------
Confidence 3333332 35999999976 56899999999999999977 58888889999999999988877665543
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.+..+-.|+..|+++|-.+||...||+.+
T Consensus 859 ------------------CP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 859 ------------------CPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ------------------CcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 36789999999999999999999999863
No 390
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=292.91 Aligned_cols=245 Identities=24% Similarity=0.381 Sum_probs=207.4
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
.+....++||-|.||.||.|.+++..-.||||.++-.. -..+.|+.|..+|+.++|||+|+|++.|..+..+|||.|
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 34567889999999999999999999999999986432 234578899999999999999999999999999999999
Q ss_pred ccc-cCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FME-TDLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~-g~L~~~~~~~~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
||. |+|++++++++.. ++.-...+++.||..|+.||..+++|||||-..|.|+.++..+||+|||+++.+.... ++
T Consensus 344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT--YT 421 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT--YT 421 (1157)
T ss_pred cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc--ee
Confidence 998 9999999998754 5555667888899999999999999999999999999999999999999999874322 22
Q ss_pred cccc---CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 170 HQVF---ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 170 ~~~~---t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
...| ..-|.|||.|.- ..++.++|||+|||+|||+.| |-.|+.+-+-..++..+-+.+....|+
T Consensus 422 AHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~Pe----------- 489 (1157)
T KOG4278|consen 422 AHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPE----------- 489 (1157)
T ss_pred cccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCC-----------
Confidence 2222 344999999854 568999999999999999987 889999988777777766665544443
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 289 (397)
++++.+..|+..||+++|.+||+.+|+-
T Consensus 490 ----------------GCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 490 ----------------GCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred ----------------CCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 3478999999999999999999998864
No 391
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=301.44 Aligned_cols=261 Identities=27% Similarity=0.389 Sum_probs=217.7
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.++|.+...+|+|.||.||+|+++.+++..|+|+++...... ...+.+|+-+++.++|||||.+++.|.....++++|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 688999999999999999999999999999999998654322 234567999999999999999999999999999999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~ 170 (397)
|||+|+.++.+....+++++.++..+++..+.||+|||++|-+|||||-.|||+++.|.+|++|||.+..++..-.....
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 99998777777767778999999999999999999999999999999999999999999999999999888776667778
Q ss_pred cccCceeeChhcc--cCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q 015948 171 QVFARWYRAPELL--FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (397)
Q Consensus 171 ~~~t~~y~aPE~l--~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (397)
.+||++|||||+- .....|+..+|||++|+...|+---++|...-.....+..+-+. + ..|...
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS-~-~qpp~l------------ 237 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS-G-FQPPTL------------ 237 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc-C-CCCCcc------------
Confidence 9999999999995 22346999999999999999999888775444333333322221 1 111111
Q ss_pred ccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 249 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.-....++.+-+|++.+|.++|++||+++.+|.|||.+.
T Consensus 238 ---------kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 238 ---------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ---------cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 111233788999999999999999999999999999864
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.7e-36 Score=320.91 Aligned_cols=253 Identities=22% Similarity=0.312 Sum_probs=188.1
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
.+.|...+.||+|+||.||+|++..++..||+|.+..... ....|++++++++|||||++++++.+.+..|+||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 4567778899999999999999999999999998864322 1235789999999999999999999999999999
Q ss_pred Eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH---hCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH---KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 91 e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
||++ |+|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+......
T Consensus 763 Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-- 835 (968)
T PLN00113 763 EYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-- 835 (968)
T ss_pred eCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence 9998 578777753 788999999999999999999 6799999999999999998888775 6665443221
Q ss_pred cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHH-hCCCCCCCCCCCCCCcc
Q 015948 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAA-FGTATPSQWPDLAYLPD 244 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~-~~~~~~~~~~~~~~~~~ 244 (397)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+...... ........|.+...
T Consensus 836 --~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 909 (968)
T PLN00113 836 --TKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSI--- 909 (968)
T ss_pred --CCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccc---
Confidence 23367888999999876 56899999999999999999999998543211 111111111 00000001100000
Q ss_pred ccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
... .........++.+++.+|++.||++|||+.|+++.
T Consensus 910 ------~~~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 910 ------RGD---VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ------cCC---CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 000 00000112457789999999999999999999874
No 393
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=289.36 Aligned_cols=200 Identities=30% Similarity=0.378 Sum_probs=176.4
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcC---CCCeeEEEeeee
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELK---SPHIIELIDAFP 81 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~---hp~iv~l~~~~~ 81 (397)
...|...+.||.|+||.|++|.++.+...|+||.|.+.+.-.. ..-.+--||+||..|+ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3459999999999999999999999999999999988753222 2223346999999997 999999999999
Q ss_pred cCCeEEEEEEccc-c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 82 HKGNLHLVFEFME-T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 82 ~~~~~~lv~e~~~-g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
+++++||+||--+ | ||.++|... ..++|.+++.|++|+..|+++||++||||||||-+|++++.+|-+||+|||.|.
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa 718 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAA 718 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchh
Confidence 9999999999987 5 888888754 459999999999999999999999999999999999999999999999999998
Q ss_pred eeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCC
Q 015948 160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQ 213 (397)
Q Consensus 160 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 213 (397)
...+ ..+...+||..|.|||++.|.++.+..-|||+||++||.++....||.
T Consensus 719 ~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 719 YTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 7643 456778899999999999998888999999999999999998877764
No 394
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=269.02 Aligned_cols=259 Identities=27% Similarity=0.370 Sum_probs=203.0
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEe-eeecCCeE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELID-AFPHKGNL 86 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~-~~~~~~~~ 86 (397)
.+.+.|.|.+.||+|.||.+-+|+|+.++..+++|.+...... ...+.+|..---.|+ |.||+.-|+ +|+..+.+
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt---~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT---QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh---HHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 3689999999999999999999999999999999998754332 335667777655564 799998876 58999999
Q ss_pred EEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc--CCcEEEeeeccceeeCC
Q 015948 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HGQLKLADFGLARIFGS 163 (397)
Q Consensus 87 ~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~~~~ 163 (397)
++++||++ |+|..-+...+ +.|...+.++.|++.|++|||++++||||||.+||||-. ..++||||||..+..+.
T Consensus 98 vF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999 89998887654 889999999999999999999999999999999999953 35799999999987655
Q ss_pred CCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCC
Q 015948 164 PDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 239 (397)
.-.... . +..|.+||++.. .-...+.+|+|.||+++|.+++|.+||+...-.+
T Consensus 176 tV~~~~-~--~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-------------------- 232 (378)
T KOG1345|consen 176 TVKYLE-Y--VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-------------------- 232 (378)
T ss_pred eehhhh-h--hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC--------------------
Confidence 332221 1 223999998743 2235788999999999999999999998543211
Q ss_pred CCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCC---CCHHHHhcCCCCC
Q 015948 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR---ITAQQALEHRYFS 295 (397)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R---~t~~e~l~hp~~~ 295 (397)
..+-.+..+.....+.+...|..+|+.+..+.++-|..++++| .++..-....|..
T Consensus 233 ~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 233 KPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred chHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence 1112222333444555667777889999999999999999999 5666666666653
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=300.23 Aligned_cols=247 Identities=29% Similarity=0.430 Sum_probs=191.0
Q ss_pred eeeeeeecCcEE-EEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 16 KREVLGEGTYGV-VYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 16 i~~~LG~G~~g~-Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
-.+.+|.|+-|+ ||+| ...|+.||||.+-.. ....+.+|+..|+.- .|||||++++.-.+.+++||..|.|
T Consensus 513 ~~eilG~Gs~Gt~Vf~G--~ye~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRG--VYEGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred cHHHcccCCCCcEEEEE--eeCCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 356788887764 6888 456889999987432 233567899999987 6999999999999999999999999
Q ss_pred ccCHHHHHHhc--CCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc---C--CcEEEeeeccceeeCCCC
Q 015948 94 ETDLETVIRNT--NIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---H--GQLKLADFGLARIFGSPD 165 (397)
Q Consensus 94 ~g~L~~~~~~~--~~~-l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~---~--~~~kl~DFG~a~~~~~~~ 165 (397)
..+|.+++... ... ......+.++.|++.||++||+.+||||||||.||||+. + .+++|+|||+++.+....
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 99999999874 111 111445789999999999999999999999999999986 3 468999999999886544
Q ss_pred C---cccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 166 R---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 166 ~---~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
. ......||.+|+|||++.... -..++|||||||++|+.++| ..||...-.. -..|+... ..
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~--------~~--- 731 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGN--------YT--- 731 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCc--------cc---
Confidence 3 344566889999999997744 46799999999999999875 7888755322 12222210 00
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
+..+-+....++.|||.+||..+|..||+|.++|.||+|.+.
T Consensus 732 --------------L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 732 --------------LVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred --------------eeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 001111112289999999999999999999999999999753
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=252.40 Aligned_cols=214 Identities=27% Similarity=0.416 Sum_probs=176.5
Q ss_pred cceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEEEEE
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
+.......||+|++|.|-+.++..+|...|+|.++.... .....+.++|+++..+. .+|++|.+|+.+...+.+++.|
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 445567889999999999999999999999999976543 22333566788876655 6899999999999999999999
Q ss_pred EccccCHHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC
Q 015948 91 EFMETDLETVI---RNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 91 e~~~g~L~~~~---~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~ 166 (397)
|.|..+|..+. .+.+..++|..+-.++..++.||.|||++ .++|||+||+||||+.+|++|+||||++-.+.+.-
T Consensus 125 E~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi- 203 (282)
T KOG0984|consen 125 ELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI- 203 (282)
T ss_pred HHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh-
Confidence 99998766554 34577799999999999999999999987 79999999999999999999999999998764422
Q ss_pred cccccccCceeeChhcccC---ccCCCCcchHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHH
Q 015948 167 RFTHQVFARWYRAPELLFG---AKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAA 227 (397)
Q Consensus 167 ~~~~~~~t~~y~aPE~l~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~ 227 (397)
..+...|...|||||.+.. .+.|+-++||||||++++||.+++.|+..- +..+++.++.+.
T Consensus 204 Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 204 AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 2223455566999999843 347999999999999999999999888754 567888777653
No 397
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=292.32 Aligned_cols=250 Identities=28% Similarity=0.418 Sum_probs=203.0
Q ss_pred cceeeeeeeeecCcEEEEEEEEC---C----CCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecC
Q 015948 12 DRYLKREVLGEGTYGVVYKAIDT---K----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK 83 (397)
Q Consensus 12 ~~y~i~~~LG~G~~g~Vy~a~~~---~----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~ 83 (397)
++..+.+.||+|+||.|++|.-. . ....||||.++..... .....+..|+++|+.+ .|+||+.+++++...
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 34467779999999999999632 1 1457999998766554 5566788999999998 599999999999999
Q ss_pred CeEEEEEEccc-cCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC
Q 015948 84 GNLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH 147 (397)
Q Consensus 84 ~~~~lv~e~~~-g~L~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~ 147 (397)
+.+++|+|||. |+|+.+++... ..++......+++||+.|++||+++.++||||-..||||..+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN 454 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC
Confidence 99999999999 89999998876 348889999999999999999999999999999999999999
Q ss_pred CcEEEeeeccceeeCCCCCcc-ccccc--CceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCC-cHHHHH
Q 015948 148 GQLKLADFGLARIFGSPDRRF-THQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSS-DIDQLG 222 (397)
Q Consensus 148 ~~~kl~DFG~a~~~~~~~~~~-~~~~~--t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~-~~~~~~ 222 (397)
..+||+|||+|+......... ....+ ...|||||.+.. ..|+.++||||+|++|||+++ |..|+.+-. ..+.+.
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~ 533 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE 533 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH
Confidence 999999999999654433222 22222 223999999987 679999999999999999987 889998855 444444
Q ss_pred HHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 223 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
.+..+.....| ...++++.+++..|++.+|++||+..++.+
T Consensus 534 ~l~~G~r~~~P---------------------------~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 534 FLKEGNRMEQP---------------------------EHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHhcCCCCCCC---------------------------CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 34333222221 234889999999999999999999999875
No 398
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=264.19 Aligned_cols=193 Identities=28% Similarity=0.356 Sum_probs=159.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHH--hcCCCCeeEEEeeeecCC----
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK--ELKSPHIIELIDAFPHKG---- 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~--~l~hp~iv~l~~~~~~~~---- 84 (397)
.....+.+.||+|.||.||+|. -+++.||||++.... .+.+..|.+|.+ .++|+||++++++-+...
T Consensus 209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~-----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQE-----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CCchhhHHHhhcCccceeehhh--ccCceeEEEecCHHH-----HHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence 3456778899999999999995 457999999976432 334555666655 568999999998876555
Q ss_pred eEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh---------CCccccCCCCCcEEEccCCcEEEee
Q 015948 85 NLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK---------KWVLHRDMKPNNLLIGSHGQLKLAD 154 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~---------~~ivHrDlkp~NILl~~~~~~kl~D 154 (397)
.++||++|.+ |+|.+++...- ++......++..+++||+|||+ ..|+|||||..||||..|+++-|+|
T Consensus 282 eywLVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 7999999998 88988888654 8999999999999999999995 3599999999999999999999999
Q ss_pred eccceeeCCC--CCcccccccCceeeChhcccCccCCC-----CcchHHHHHHHHHHHHhCCCCC
Q 015948 155 FGLARIFGSP--DRRFTHQVFARWYRAPELLFGAKQYG-----AGVDVWAAGCIFAELLNRRPFL 212 (397)
Q Consensus 155 FG~a~~~~~~--~~~~~~~~~t~~y~aPE~l~~~~~~~-----~~~DiwSlG~il~ell~g~~pf 212 (397)
||+|..+... ......++||..|||||+|.+..... .+.||||+|.+||||+++...+
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~ 424 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDA 424 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999987532 33455689999999999998765554 4689999999999999876544
No 399
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=279.43 Aligned_cols=247 Identities=24% Similarity=0.340 Sum_probs=204.8
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCc----EEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
.+..++||+|+||+||+|.+...|+ .||||++.... .......+++|+-+|.++.|||+++|++.+.... +.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 4557889999999999998866665 57888776433 2334557889999999999999999999997766 8899
Q ss_pred EEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcc
Q 015948 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (397)
Q Consensus 90 ~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~ 168 (397)
++|++ |.|+++++.....+..+....|+.||++|+.|||.++++||||-..||||.+-..+||.|||+|+.+......+
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 99999 79999999988889999999999999999999999999999999999999999999999999999887766665
Q ss_pred cccccC--ceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 169 THQVFA--RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 169 ~~~~~t--~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
....|. +-|||-|.+.. ..|+.++|||||||++||++| |..|+.+....++-..+..+..
T Consensus 856 ~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR---------------- 918 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER---------------- 918 (1177)
T ss_pred cccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc----------------
Confidence 555553 34888888865 669999999999999999986 8889888765554333222111
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
-.-+|..+-++.-++.+||..|+..||+++++..
T Consensus 919 -----------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 919 -----------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred -----------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 1223456889999999999999999999988754
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=1.1e-32 Score=241.96 Aligned_cols=213 Identities=39% Similarity=0.649 Sum_probs=184.2
Q ss_pred eeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHH
Q 015948 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLE 98 (397)
Q Consensus 20 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~ 98 (397)
||+|++|.||++.+..+++.+++|++....... ....+.+|+..++.++|++|+++++++......++++||++ ++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 689999999999998889999999987544321 23467899999999999999999999999999999999999 6888
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-CCcEEEeeeccceeeCCCCCcccccccCcee
Q 015948 99 TVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (397)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y 177 (397)
.++......++...+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+..............+...|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY 159 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc
Confidence 887765345899999999999999999999999999999999999999 8999999999998765543223345566779
Q ss_pred eChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCcc
Q 015948 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257 (397)
Q Consensus 178 ~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (397)
++||.+.....++.+.|+|+||+++++|
T Consensus 160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------------- 187 (215)
T cd00180 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------------- 187 (215)
T ss_pred cChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------------
Confidence 9999986643688999999999999999
Q ss_pred ccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCC
Q 015948 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292 (397)
Q Consensus 258 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 292 (397)
..+.+++.+||..||.+||++.++++|+
T Consensus 188 -------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1477899999999999999999999874
No 401
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-33 Score=254.23 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=185.0
Q ss_pred hhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHH--hcCCCCeeEEEeeeecC--
Q 015948 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK--ELKSPHIIELIDAFPHK-- 83 (397)
Q Consensus 8 ~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~--~l~hp~iv~l~~~~~~~-- 83 (397)
..+..+-++++.||+|.||.||+|.+ .|+.||||++.... ....++|.+|.. -|+|+||+.++++-..+
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g 279 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDNG 279 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence 34688899999999999999999955 58999999986322 224456666655 46999999998875332
Q ss_pred --CeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-----C---CccccCCCCCcEEEccCCcEEE
Q 015948 84 --GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-----K---WVLHRDMKPNNLLIGSHGQLKL 152 (397)
Q Consensus 84 --~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-----~---~ivHrDlkp~NILl~~~~~~kl 152 (397)
.+++||.+|.+ |+|.+++... .++-+....++..++.||++||. + .|.|||||..||||..+|.+-|
T Consensus 280 s~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 280 SWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred ceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 27999999999 8999999874 38999999999999999999994 2 3999999999999999999999
Q ss_pred eeeccceeeCCCC----CcccccccCceeeChhcccCccCC-----CCcchHHHHHHHHHHHHh-----C-----CCCCC
Q 015948 153 ADFGLARIFGSPD----RRFTHQVFARWYRAPELLFGAKQY-----GAGVDVWAAGCIFAELLN-----R-----RPFLQ 213 (397)
Q Consensus 153 ~DFG~a~~~~~~~----~~~~~~~~t~~y~aPE~l~~~~~~-----~~~~DiwSlG~il~ell~-----g-----~~pf~ 213 (397)
+|+|+|....... ......+||-.|||||+|....+. -..+||||||.++||++- | ++||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 9999998765442 345678999999999999653321 246899999999999872 2 34554
Q ss_pred CCC----cHHHHHHHH--HHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHH
Q 015948 214 GSS----DIDQLGKIF--AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQ 287 (397)
Q Consensus 214 ~~~----~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e 287 (397)
+-- ..+.+.+++ +.+....|..|.... .-..+..+++.|+..||.-|.|+-.
T Consensus 438 d~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~----------------------~l~~m~klMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDP----------------------ALRVMAKLMKECWYANPAARLTALR 495 (513)
T ss_pred cCCCCCCCHHHHhcceeecccCCCCCcccccCH----------------------HHHHHHHHHHHhhcCCchhhhHHHH
Confidence 321 122222211 111111122221110 0124567899999999999999866
Q ss_pred Hhc
Q 015948 288 ALE 290 (397)
Q Consensus 288 ~l~ 290 (397)
+.+
T Consensus 496 iKK 498 (513)
T KOG2052|consen 496 IKK 498 (513)
T ss_pred HHH
Confidence 643
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1e-33 Score=296.90 Aligned_cols=202 Identities=14% Similarity=0.202 Sum_probs=150.3
Q ss_pred HHhcCC-CCeeEEEeee-------ecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccC
Q 015948 65 LKELKS-PHIIELIDAF-------PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRD 136 (397)
Q Consensus 65 l~~l~h-p~iv~l~~~~-------~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrD 136 (397)
.+.++| .||++++++| .+...++++|||++++|..++......+++..++.|++||+.||+|||++||+|||
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 345556 6888888888 33346788899999999999987666699999999999999999999999999999
Q ss_pred CCCCcEEEccCC-------------------cEEEeeeccceeeCCCC----------------CcccccccCceeeChh
Q 015948 137 MKPNNLLIGSHG-------------------QLKLADFGLARIFGSPD----------------RRFTHQVFARWYRAPE 181 (397)
Q Consensus 137 lkp~NILl~~~~-------------------~~kl~DFG~a~~~~~~~----------------~~~~~~~~t~~y~aPE 181 (397)
|||+||||+..| .+||+|||+++...... ......++|++|||||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 999999996544 45566666655321100 0011246789999999
Q ss_pred cccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCC
Q 015948 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP 261 (397)
Q Consensus 182 ~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (397)
++.+ ..|+.++|||||||+||||++|.+++.... ..+..+.... .+.. ..
T Consensus 186 ~~~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~---~~~~------------------------~~ 235 (793)
T PLN00181 186 EDNG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV---LPPQ------------------------IL 235 (793)
T ss_pred hhcc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh---cChh------------------------hh
Confidence 9977 568999999999999999999988865322 1122221110 0000 00
Q ss_pred CCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 262 SASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 262 ~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
...+...+++.+||..||.+||++.|+++||||..
T Consensus 236 ~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 236 LNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred hcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 11356778999999999999999999999999975
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=100.00 E-value=9.3e-32 Score=239.59 Aligned_cols=204 Identities=38% Similarity=0.598 Sum_probs=174.4
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
|.+.+.||+|++|+||++.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 67889999999999999999988999999998765433 13446778999999999999999999999999999999999
Q ss_pred cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC-Cccccc
Q 015948 94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQ 171 (397)
Q Consensus 94 ~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~~~~ 171 (397)
++ +|.+.+......+++..+..++.+++.+|.+||++|++|+||+|.||+++.++.++|+|||.+....... ......
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 96 8888887654337899999999999999999999999999999999999999999999999998875432 122345
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCC-CCcH
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG-SSDI 218 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~-~~~~ 218 (397)
.++..|++||.+.+...++.++|+||||+++|+|++|++||.. .++.
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~ 207 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT 207 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence 5677799999984445677899999999999999999999977 4444
No 404
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.8e-31 Score=266.94 Aligned_cols=269 Identities=26% Similarity=0.376 Sum_probs=207.5
Q ss_pred hcce-eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecC----CccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCe
Q 015948 11 ADRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG----KQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (397)
Q Consensus 11 ~~~y-~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~----~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 85 (397)
.+.| .....+|.|++|.|+.+......+.++.|..+.. .........+..|+-+-..|.|+|++..++.+.+...
T Consensus 316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG 395 (601)
T ss_pred ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc
Confidence 4556 5678899999999999988877777777766521 1111122224567778888899999998888777666
Q ss_pred EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC
Q 015948 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~ 165 (397)
.+-+||||++||..++... +.++..++..++.||+.||+|||++||.||||||+|+++..+|.+||+|||.+..+..+.
T Consensus 396 ~~~~mE~~~~Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 396 ILQSMEYCPYDLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred chhhhhcccHHHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 6666999999887777764 458999999999999999999999999999999999999999999999999998775443
Q ss_pred ----CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCC
Q 015948 166 ----RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (397)
Q Consensus 166 ----~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 241 (397)
......+|+..|+|||++.+.......+||||.|++++.|++|+.||......+....-
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~----------------- 537 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT----------------- 537 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh-----------------
Confidence 33556778888999999988665567789999999999999999999765443321100
Q ss_pred CccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
...............+...++...+.+|.+||+.||.+|.|+++|++.+||+....
T Consensus 538 --~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 538 --NNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred --hccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 00000111112223444556788999999999999999999999999999987543
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.97 E-value=4.9e-30 Score=220.51 Aligned_cols=166 Identities=21% Similarity=0.274 Sum_probs=130.4
Q ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccC
Q 015948 95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (397)
Q Consensus 95 g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t 174 (397)
|+|.+++.+.+..+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||+++...... ..|+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~ 67 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVD 67 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc-----CCCc
Confidence 6888888876667999999999999999999999999 999999999999999 99998764432 2678
Q ss_pred ceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (397)
Q Consensus 175 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
+.|+|||++.+ ..|+.++|||||||++|||++|.+||...... ..+..+........+..
T Consensus 68 ~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 128 (176)
T smart00750 68 PYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD------------------ 128 (176)
T ss_pred ccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc------------------
Confidence 89999999977 56899999999999999999999999765443 23333332211110000
Q ss_pred CCccccCCCCCH--HHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 254 PPLRSLFPSASD--DALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 254 ~~~~~~~~~~s~--~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
......++. .+++||.+||..||.+||++.|+++|+|+.
T Consensus 129 ---~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 129 ---RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred ---cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 000011233 699999999999999999999999999864
No 406
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=228.25 Aligned_cols=251 Identities=18% Similarity=0.244 Sum_probs=196.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCC-----cEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeee-ecCC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~ 84 (397)
.+|+++...+-+|.||.||.|+++... +.+-+|.++.... +-+...++.|--+|..+.|||+..+.+.. ++..
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS-~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS-QIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc-HHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 578889999999999999999765432 3355665543322 22233566788888999999999998875 4566
Q ss_pred eEEEEEEccc-cCHHHHHHhcC-----C--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948 85 NLHLVFEFME-TDLETVIRNTN-----I--FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG 156 (397)
Q Consensus 85 ~~~lv~e~~~-g~L~~~~~~~~-----~--~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG 156 (397)
..+.++.+++ |+|..++.... . .++-.+...++.|++.|++|||++|+||.||-..|.+|++.-++||+|=.
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch
Confidence 7888899999 89999988332 1 26667778899999999999999999999999999999999999999999
Q ss_pred cceeeCCCCCcccccc--cCceeeChhcccCccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948 157 LARIFGSPDRRFTHQV--FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATP 233 (397)
Q Consensus 157 ~a~~~~~~~~~~~~~~--~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~ 233 (397)
+++.+...+...-..- ...-|||||.+.. ..|+.++|+|||||++|||+| |+.|+..-+..+...-+..+.....|
T Consensus 442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP 520 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQP 520 (563)
T ss_pred hccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCC
Confidence 9998755443221111 1234999999977 679999999999999999997 88998888777776666554332222
Q ss_pred CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
- ++++++..++.-||..+|++||+.+|+..
T Consensus 521 ~---------------------------NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 521 F---------------------------NCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred C---------------------------CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 2 34789999999999999999999999864
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=7.2e-29 Score=233.56 Aligned_cols=168 Identities=23% Similarity=0.327 Sum_probs=130.1
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCc---cCCccchHHHHHHHHHhcCCCCeeE-EEeeee
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIE-LIDAFP 81 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~-l~~~~~ 81 (397)
...+.++|.+.+.||+|+||+||+|++.. +++.+|||++..... .......+.+|+.+|+.++|+||+. +++.
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 34578999999999999999999999876 678889998753311 1122345789999999999999985 4432
Q ss_pred cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC-CCCcEEEccCCcEEEeeecccee
Q 015948 82 HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM-KPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 82 ~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDl-kp~NILl~~~~~~kl~DFG~a~~ 160 (397)
+..|+|||||+|..+..+.. .. ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+.
T Consensus 91 --~~~~LVmE~~~G~~L~~~~~----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHLARP----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred --CCcEEEEEccCCCCHHHhCc----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 45799999999754443221 11 1468899999999999999999999 99999999999999999999997
Q ss_pred eCCCCC--------cccccccCceeeChhcccC
Q 015948 161 FGSPDR--------RFTHQVFARWYRAPELLFG 185 (397)
Q Consensus 161 ~~~~~~--------~~~~~~~t~~y~aPE~l~~ 185 (397)
+..... ..++.++++.|+|||.+..
T Consensus 162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 654321 1235566777999999843
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.96 E-value=2.9e-27 Score=221.53 Aligned_cols=262 Identities=33% Similarity=0.504 Sum_probs=207.3
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCC-CeeEEEeeeecCCeEEEEEE
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSP-HIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp-~iv~l~~~~~~~~~~~lv~e 91 (397)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.++..+.|+ +|+++++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999887 8899999877655443 455688999999999988 79999999988888999999
Q ss_pred cccc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-cEEEeeeccceeeCCCCC-
Q 015948 92 FMET-DLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDR- 166 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~~~~- 166 (397)
|+.| ++...+.... ..+.+..+..++.|++.++.|+|+.|++|||+||+||+++..+ .++++|||+++.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9995 5664554433 2699999999999999999999999999999999999999988 799999999986644432
Q ss_pred -----cccccccCceeeChhcccCc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHHHhCCC-CCCC
Q 015948 167 -----RFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---IDQLGKIFAAFGTA-TPSQ 235 (397)
Q Consensus 167 -----~~~~~~~t~~y~aPE~l~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~-~~~~ 235 (397)
.....+++..|++||.+.+. ..+....|+||+|++++++++|..||..... .......+...... ....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 34677899999999999774 4788999999999999999999999887764 33333333332211 0000
Q ss_pred CCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCC
Q 015948 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSA 297 (397)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 297 (397)
... .........+.+++..++..+|..|.+..+...++|....
T Consensus 239 ~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 239 LSP-------------------SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred cCc-------------------cccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 000 0001223578999999999999999999999888665543
No 409
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.5e-30 Score=244.80 Aligned_cols=244 Identities=27% Similarity=0.404 Sum_probs=201.3
Q ss_pred eeeecCcEEEEEEEE---CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEEEccc
Q 015948 19 VLGEGTYGVVYKAID---TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
.+|.|+||.|++++. ...|..||+|+..+.............|..++..++ ||++|++..+|+.++.+|++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 479999999999853 345778999999876654444444556888999887 9999999999999999999999999
Q ss_pred c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccccc
Q 015948 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (397)
Q Consensus 95 g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 173 (397)
| +|...+.+ ...+.+..++.+...++-+++++|+.||+|||+|++||+++.+|++++.|||+++..-..... ||
T Consensus 81 gg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----cg 155 (612)
T KOG0603|consen 81 GGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----CG 155 (612)
T ss_pred cchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----cc
Confidence 6 55555544 445888999999999999999999999999999999999999999999999999876433322 88
Q ss_pred CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccC
Q 015948 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (397)
Q Consensus 174 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
|..|||||++. ....++|+||||++.|||++|..||.+ +....|...--
T Consensus 156 t~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~------------------------ 204 (612)
T KOG0603|consen 156 TYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAEL------------------------ 204 (612)
T ss_pred chhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhcc------------------------
Confidence 99999999997 367889999999999999999999987 55566554210
Q ss_pred CCccccCCCCCHHHHHHHHHhcCcCCCCCCC-----HHHHhcCCCCCCCCCCCC
Q 015948 254 PPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRYFSSAPLPTE 302 (397)
Q Consensus 254 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~ 302 (397)
.....++..+.+++..++..+|..|.. +.|+++|+||+...|...
T Consensus 205 ----~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l 254 (612)
T KOG0603|consen 205 ----EMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNEL 254 (612)
T ss_pred ----CCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhH
Confidence 112345789999999999999999975 479999999998877643
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.96 E-value=4e-27 Score=221.80 Aligned_cols=252 Identities=22% Similarity=0.234 Sum_probs=195.8
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCC-cEEEEEEeecCCccCCccchHHHHHHHHHhcCC----CCeeEEEeee-ecCCeE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELKS----PHIIELIDAF-PHKGNL 86 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h----p~iv~l~~~~-~~~~~~ 86 (397)
+|.+.+.||+|+||.||+|.+..++ ..+|+|+.......... .+..|+.++..+.. .++..+++.+ ..+.+-
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999988775 68999987654332211 46679999999873 6999999999 588899
Q ss_pred EEEEEccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-----CcEEEeeeccce-
Q 015948 87 HLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-----GQLKLADFGLAR- 159 (397)
Q Consensus 87 ~lv~e~~~g~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-----~~~kl~DFG~a~- 159 (397)
|+||+.++.+|.++..... ..++...+..++.|++.+|++||+.|++||||||+|+++... ..+.|.|||+|+
T Consensus 97 ~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 9999999999999886654 679999999999999999999999999999999999999865 359999999998
Q ss_pred -eeCCCC-------Cc-ccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 015948 160 -IFGSPD-------RR-FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT 230 (397)
Q Consensus 160 -~~~~~~-------~~-~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 230 (397)
.+.... +. .....||..|.++.+..+ ...+.+.|+||++.++.+|+.|..||.+.+.......+......
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh
Confidence 321111 11 223458999999999877 56899999999999999999999999877654444333332111
Q ss_pred CCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
..... .....+..+.++...+-..+...+|....+..
T Consensus 256 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 256 LLTDR-----------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred hcccc-----------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 10000 11122467777777777788889998777654
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-27 Score=202.25 Aligned_cols=248 Identities=21% Similarity=0.246 Sum_probs=197.1
Q ss_pred hhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEE
Q 015948 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLH 87 (397)
Q Consensus 9 ~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~ 87 (397)
.+.++|.++++||+|+||.+|+|....+|..||||+-...... -.+..|..+.+.|++ ..|..+..++.+..+-.
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 3588999999999999999999999999999999986544333 346679999999987 78888888888889999
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC---CcEEEeeeccceeeCCC
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLARIFGSP 164 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~---~~~kl~DFG~a~~~~~~ 164 (397)
+|||.++.+|.+++.-+...++...+..++-|++.-++|+|.++++||||||+|+|..-+ ..+.|+|||+|+.+-+.
T Consensus 88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 999999999999998887789999999999999999999999999999999999999754 45899999999876432
Q ss_pred -------CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHHHhCCCCCC
Q 015948 165 -------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKIFAAFGTATPS 234 (397)
Q Consensus 165 -------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~ 234 (397)
.+......||..|.+=-...+ ...+.+-|+-|+|.+|.++.-|..||++-. ..+.+++|.+.-.
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~----- 241 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM----- 241 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc-----
Confidence 234556778888998777665 446788999999999999999999999864 3444555544311
Q ss_pred CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCC
Q 015948 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT 284 (397)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t 284 (397)
..+...+..+.+.++.-.+..|=..--++-|.
T Consensus 242 ------------------s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd 273 (341)
T KOG1163|consen 242 ------------------STPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD 273 (341)
T ss_pred ------------------CCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence 11223334455667766676665555555554
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-27 Score=209.74 Aligned_cols=213 Identities=23% Similarity=0.313 Sum_probs=181.0
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCe
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGN 85 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~ 85 (397)
...+.-.|.+.++||+|+||..+.|.+..+++.||||.-....... .+..|....+.|. .++|..+|.+.+.+-+
T Consensus 23 ~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~AP----QLrdEYr~YKlL~g~~GIP~vYYFGqeG~~ 98 (449)
T KOG1165|consen 23 VLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAP----QLRDEYRTYKLLGGTEGIPQVYYFGQEGKY 98 (449)
T ss_pred ceEecccceeccccccCcceeeecccccccCceEEEEeccccCCcc----hHHHHHHHHHHHcCCCCCCceeeeccccch
Confidence 3456789999999999999999999999999999999865433332 4557888888885 4999999988888888
Q ss_pred EEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-----cEEEeeecccee
Q 015948 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-----QLKLADFGLARI 160 (397)
Q Consensus 86 ~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~-----~~kl~DFG~a~~ 160 (397)
-.||+|+++.+|.+++.-++..|+...+..++.|++.-++|+|++.+|+|||||+|+||...| .+.|+|||+|+.
T Consensus 99 NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 99 NILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 899999999999999998988999999999999999999999999999999999999998654 399999999998
Q ss_pred eCCCC-------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHH
Q 015948 161 FGSPD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKI 224 (397)
Q Consensus 161 ~~~~~-------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i 224 (397)
+.++. +.-....||..||+=-..+| +.-+.+-|+-|||.+|++.|-|..||+|-. +.+.+++|
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred hcCccccccCccccccccccceeeeEeecccc-chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence 76554 23445678889999888887 557899999999999999999999998854 34444444
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.94 E-value=7.8e-27 Score=234.07 Aligned_cols=226 Identities=27% Similarity=0.402 Sum_probs=175.3
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
...+|..++.|-.|+||.||+++|+.+.+.+|+| +.+.+. +.|- +|..-.+|++|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee---------------
Confidence 3578999999999999999999999999999995 332211 1111 33333344444
Q ss_pred EEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC----
Q 015948 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (397)
Q Consensus 90 ~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---- 165 (397)
||....++..+ .++.+. +.+++|||+.||+|||+||+|.||..-|++|++|||+.+......
T Consensus 136 -----gDc~tllk~~g-~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 136 -----GDCATLLKNIG-PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred -----chhhhhcccCC-CCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence 66666665533 354444 679999999999999999999999999999999999987532110
Q ss_pred -----------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCC
Q 015948 166 -----------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (397)
Q Consensus 166 -----------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 234 (397)
-.....+||+.|+|||+++. +.|+..+|||++|+|+||.+.|+.||.+.+.++.+..++.........
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~ 280 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE 280 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence 11234589999999999976 679999999999999999999999999999999988887754443333
Q ss_pred CCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCC---CHHHHhcCCCCCCCCCC
Q 015948 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI---TAQQALEHRYFSSAPLP 300 (397)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---t~~e~l~hp~~~~~~~~ 300 (397)
.+ .+.++++++|.++|+.+|..|. .+-++.+|+||....|.
T Consensus 281 de-------------------------a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 281 DE-------------------------ALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred Cc-------------------------CCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 22 2368999999999999999995 56788899999877665
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.94 E-value=3.1e-26 Score=198.61 Aligned_cols=143 Identities=21% Similarity=0.179 Sum_probs=109.7
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-------c-----------------chHHHHHHHHHhcCCC
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-------N-----------------FTALREIKLLKELKSP 71 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-------~-----------------~~~~~E~~~l~~l~hp 71 (397)
+.+.||+|+||.||+|.+. +|+.||||+++........ . ....+|+.+|..+.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05147 1 INGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA 79 (190)
T ss_pred CCCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 3578999999999999987 8999999999865322111 0 1123499999999877
Q ss_pred CeeEEEeeeecCCeEEEEEEccccCHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCcEEEccCCc
Q 015948 72 HIIELIDAFPHKGNLHLVFEFMETDLE-TVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNLLIGSHGQ 149 (397)
Q Consensus 72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~-~~~~~~~~~l~~~~~~~~~~qil~aL~~l-H~~~ivHrDlkp~NILl~~~~~ 149 (397)
++........ .. .+|||||++|+.+ ..... ...+++..+..++.||+.+|.++ |+.||+||||||+|||++ ++.
T Consensus 80 ~v~~p~~~~~-~~-~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 80 GIPCPEPILL-KS-HVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCCcEEEe-cC-CEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7643332222 22 3899999997533 33232 34689999999999999999999 799999999999999998 578
Q ss_pred EEEeeeccceeeCC
Q 015948 150 LKLADFGLARIFGS 163 (397)
Q Consensus 150 ~kl~DFG~a~~~~~ 163 (397)
++|+|||+|.....
T Consensus 156 v~LiDFG~a~~~~~ 169 (190)
T cd05147 156 LYIIDVSQSVEHDH 169 (190)
T ss_pred EEEEEccccccCCC
Confidence 99999999986544
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.93 E-value=1.1e-25 Score=197.67 Aligned_cols=175 Identities=12% Similarity=0.096 Sum_probs=133.2
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cch------HHHHHHHHHhcCCCCeeEEEee
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFT------ALREIKLLKELKSPHIIELIDA 79 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~------~~~E~~~l~~l~hp~iv~l~~~ 79 (397)
.+.+.++|.+.+.||.|+||.||++.+ ++..+|||+++........ ... +.+|+..+.++.|++|..+.++
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 456799999999999999999999754 4678999999755432221 112 4589999999999999999888
Q ss_pred eecC--------CeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948 80 FPHK--------GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (397)
Q Consensus 80 ~~~~--------~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~ 150 (397)
+... +..++||||++| +|.+.. . +++ ....+++.+|..||+.|++|||+||+||+++.+| +
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMP-E----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhh-h----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence 6543 358999999998 555542 1 333 2456999999999999999999999999999999 9
Q ss_pred EEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948 151 KLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206 (397)
Q Consensus 151 kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell 206 (397)
+|+|||.......... -+.+.-...|+.++|+||||+++..+.
T Consensus 174 ~liDfg~~~~~~e~~a-------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKA-------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhh-------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 9999998875422111 111212245778999999999987654
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.92 E-value=5.6e-25 Score=198.82 Aligned_cols=235 Identities=21% Similarity=0.279 Sum_probs=148.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-cchHHHHHHHHHhcC----------CCCeeEEEeee-
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREIKLLKELK----------SPHIIELIDAF- 80 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~-~~~~~~E~~~l~~l~----------hp~iv~l~~~~- 80 (397)
.+...+.||.|+++.||.+.|..||+.+|+|+.......... ...+.+|.-....+. |-.++-.+|..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 467788999999999999999999999999998766532222 222333332222221 11122222221
Q ss_pred --------ecC---C-----eEEEEEEccccCHHHHHHh---cCCC---CCHHHHHHHHHHHHHHHHHhHhCCccccCCC
Q 015948 81 --------PHK---G-----NLHLVFEFMETDLETVIRN---TNIF---LSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138 (397)
Q Consensus 81 --------~~~---~-----~~~lv~e~~~g~L~~~~~~---~~~~---l~~~~~~~~~~qil~aL~~lH~~~ivHrDlk 138 (397)
... . +.+++|+-+.+||..++.. .... +....-..+..|++..+++||+.|++|+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 111 1 3478899999988776542 2211 2222234455899999999999999999999
Q ss_pred CCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCc-------cCCCCcchHHHHHHHHHHHHhCCCC
Q 015948 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA-------KQYGAGVDVWAAGCIFAELLNRRPF 211 (397)
Q Consensus 139 p~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~-------~~~~~~~DiwSlG~il~ell~g~~p 211 (397)
|+|++++.+|.+.|+||+.....+.... ....+..|.+||..... ..++.+.|.|+||+++|.|++|..|
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~---~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP 249 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYR---CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP 249 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEE---GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceee---ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence 9999999999999999998877544222 13334569999987432 2478899999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCC
Q 015948 212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282 (397)
Q Consensus 212 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 282 (397)
|........ ++ ..+.... .+++.+++||..+|+.||.+|
T Consensus 250 f~~~~~~~~----------------~~---------------~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 250 FGLSSPEAD----------------PE---------------WDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp TCCCGGGST----------------SG---------------GGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCcccc----------------cc---------------ccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 875532110 00 0122333 568999999999999999988
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.92 E-value=8.8e-25 Score=190.10 Aligned_cols=143 Identities=18% Similarity=0.171 Sum_probs=112.0
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc------------------------cchHHHHHHHHHhcCCC
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV------------------------NFTALREIKLLKELKSP 71 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~------------------------~~~~~~E~~~l~~l~hp 71 (397)
+.+.||+|+||.||+|.+. +|+.||||+++........ .....+|...+.++.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678999999999999987 8999999999875321100 11234789999999998
Q ss_pred CeeEEEeeeecCCeEEEEEEccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCCc
Q 015948 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQ 149 (397)
Q Consensus 72 ~iv~l~~~~~~~~~~~lv~e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~~ 149 (397)
+|.....+.... .|+||||++|. +...... ...+++..+..++.|++.+|.++|+ +||+||||||+|||++ ++.
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 875443333222 48999999975 4333222 3457889999999999999999999 9999999999999998 889
Q ss_pred EEEeeeccceeeCC
Q 015948 150 LKLADFGLARIFGS 163 (397)
Q Consensus 150 ~kl~DFG~a~~~~~ 163 (397)
++|+|||+|+....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999987644
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=2.6e-24 Score=185.01 Aligned_cols=188 Identities=18% Similarity=0.134 Sum_probs=137.7
Q ss_pred eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC--ccchHHHHHHHHHhcCC-CCeeEEEeeeecCCeEEEEEE
Q 015948 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~--~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~e 91 (397)
.+...|++|+||+||++.. .+..++.+.+........ ....+.+|+++|++|.| ++|++++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4678899999999998854 677888776654433111 12246789999999965 889999886 34699999
Q ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC-CCCcEEEccCCcEEEeeeccceeeCCCCCc---
Q 015948 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM-KPNNLLIGSHGQLKLADFGLARIFGSPDRR--- 167 (397)
Q Consensus 92 ~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDl-kp~NILl~~~~~~kl~DFG~a~~~~~~~~~--- 167 (397)
|+.|..+..... .. ...++.|++.+|++||++||+|||| ||+|||++.+|.++|+|||+|.........
T Consensus 79 yI~G~~L~~~~~------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~ 151 (218)
T PRK12274 79 YLAGAAMYQRPP------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL 151 (218)
T ss_pred eecCccHHhhhh------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence 999854432211 11 2357889999999999999999999 799999999999999999999865443321
Q ss_pred ----------ccccccCceeeChhcccCccCCC-CcchHHHHHHHHHHHHhCCCCCCCC
Q 015948 168 ----------FTHQVFARWYRAPELLFGAKQYG-AGVDVWAAGCIFAELLNRRPFLQGS 215 (397)
Q Consensus 168 ----------~~~~~~t~~y~aPE~l~~~~~~~-~~~DiwSlG~il~ell~g~~pf~~~ 215 (397)
.....+++.|++|+.-.--...+ .+.++++.|+-+|.++|+..|+-+.
T Consensus 152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 00112466688888753322223 5679999999999999999776543
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.91 E-value=6.7e-25 Score=220.55 Aligned_cols=248 Identities=27% Similarity=0.350 Sum_probs=180.9
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc--cchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV--NFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 90 (397)
+|...+.||++.|=+|.+|++.. | .|+||++-+....-.. ..+.++|++ ...+++||.+.+.-+-..+...|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68889999999999999997653 3 4999999766532222 222334555 66678999999988888888899999
Q ss_pred EccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCC---Cc
Q 015948 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---RR 167 (397)
Q Consensus 91 e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~---~~ 167 (397)
+|+..+|.+.+-.+. .+..-+.+-|+.||+.||.-||..||+|||||.|||||+.-+-+.|+||..-+..--+. ..
T Consensus 101 qyvkhnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad 179 (1431)
T KOG1240|consen 101 QYVKHNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD 179 (1431)
T ss_pred HHHhhhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence 999999999987654 48888999999999999999999999999999999999999999999997654321111 11
Q ss_pred cccccc----CceeeChhcccCcc----------CCCCcchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCC
Q 015948 168 FTHQVF----ARWYRAPELLFGAK----------QYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTAT 232 (397)
Q Consensus 168 ~~~~~~----t~~y~aPE~l~~~~----------~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~ 232 (397)
++...- -..|.|||.+.... ..+++-||||+||+++||++ |+|+|.-+ ++++--.
T Consensus 180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-------QL~aYr~--- 249 (1431)
T KOG1240|consen 180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-------QLLAYRS--- 249 (1431)
T ss_pred ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-------HHHhHhc---
Confidence 221111 23499999975411 14577899999999999986 79999622 1111000
Q ss_pred CCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
-. ...+.. -++.+ -+..++.+|..|++.||++|.+|++.|+.
T Consensus 250 ~~-----~~~~e~---------~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 250 GN-----ADDPEQ---------LLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred cC-----ccCHHH---------HHHhC---cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 00 000000 00000 14578999999999999999999999974
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-23 Score=190.73 Aligned_cols=194 Identities=25% Similarity=0.307 Sum_probs=141.8
Q ss_pred CCCCeeEEEeeeec---------------------------CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHH
Q 015948 69 KSPHIIELIDAFPH---------------------------KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121 (397)
Q Consensus 69 ~hp~iv~l~~~~~~---------------------------~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil 121 (397)
+|||||++..+|.+ ...+|+||.-...+|..++..+. .+......++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~--~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH--RSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC--CchHHHHHHHHHHH
Confidence 49999999887632 23589999999999999998776 67888899999999
Q ss_pred HHHHHhHhCCccccCCCCCcEEEccC--C--cEEEeeeccceeeCCCC------CcccccccCceeeChhcccCccC---
Q 015948 122 KGLAFCHKKWVLHRDMKPNNLLIGSH--G--QLKLADFGLARIFGSPD------RRFTHQVFARWYRAPELLFGAKQ--- 188 (397)
Q Consensus 122 ~aL~~lH~~~ivHrDlkp~NILl~~~--~--~~kl~DFG~a~~~~~~~------~~~~~~~~t~~y~aPE~l~~~~~--- 188 (397)
+|+.|||++||.|||||.+||||.-+ + .+.|+|||.+-.-.... +.....-|.-.-||||+......
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 99999999999999999999999533 2 48999999874322111 11222334555899999743221
Q ss_pred --CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHH
Q 015948 189 --YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD 266 (397)
Q Consensus 189 --~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 266 (397)
.-.++|.|+.|.+.||+++...||.+..+- +.+...|+..+.| .+...+++.
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem-----------------------~L~~r~Yqe~qLP---alp~~vpp~ 485 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-----------------------LLDTRTYQESQLP---ALPSRVPPV 485 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchh-----------------------eechhhhhhhhCC---CCcccCChH
Confidence 124789999999999999999888763211 1111122222222 334566899
Q ss_pred HHHHHHHhcCcCCCCCCCH---HHHhc
Q 015948 267 ALDLLSKMFTYDPKARITA---QQALE 290 (397)
Q Consensus 267 ~~~li~~~L~~dP~~R~t~---~e~l~ 290 (397)
+++|+..+|+.||++|+++ +.+|+
T Consensus 486 ~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 486 ARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHHHhcCCccccCCccHHHhHHH
Confidence 9999999999999999985 44554
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.89 E-value=1.6e-22 Score=177.12 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=105.9
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-----CCCCeeEEEeeeecCC---eEE
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-----KSPHIIELIDAFPHKG---NLH 87 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~l~~~~~~~~---~~~ 87 (397)
-.+.||+|+||.||. ++.++.. +||++...... ....+.+|+.+++.+ .||||++++++++++. .++
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 357899999999995 7777666 69988764321 234578999999999 5799999999998873 444
Q ss_pred -EEEEccc---cCHHHHHHhcCCCCCHHHHHHHHHHHHHHH-HHhHhCCccccCCCCCcEEEccC----CcEEEeeeccc
Q 015948 88 -LVFEFME---TDLETVIRNTNIFLSPADIKSYMQMTLKGL-AFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLA 158 (397)
Q Consensus 88 -lv~e~~~---g~L~~~~~~~~~~l~~~~~~~~~~qil~aL-~~lH~~~ivHrDlkp~NILl~~~----~~~kl~DFG~a 158 (397)
+|+||++ |+|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++.. ++++|+||+.+
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 7899955 5888888653 36665 35678888787 99999999999999999999743 37999995544
Q ss_pred e
Q 015948 159 R 159 (397)
Q Consensus 159 ~ 159 (397)
.
T Consensus 157 ~ 157 (210)
T PRK10345 157 S 157 (210)
T ss_pred c
Confidence 3
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.1e-22 Score=207.87 Aligned_cols=192 Identities=22% Similarity=0.329 Sum_probs=158.6
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~ 87 (397)
.+.|-|.+.||+|+||+||+|.+.+ |+.||||+-+.....+ +.-=.+++.+|+ -+.|..+..++...+.-+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 6789999999999999999999887 9999999965544333 222344555555 356677777777777788
Q ss_pred EEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-------CcEEEeeeccce
Q 015948 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-------GQLKLADFGLAR 159 (397)
Q Consensus 88 lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-------~~~kl~DFG~a~ 159 (397)
+|+||.+ |+|++++. .+.-+++..+..+..|++..++.||.++|||+||||+|+||... --++|+|||-+-
T Consensus 771 lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 9999999 89999988 45559999999999999999999999999999999999999532 349999999886
Q ss_pred ee--CCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCC
Q 015948 160 IF--GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210 (397)
Q Consensus 160 ~~--~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~ 210 (397)
.+ ......+...++|-.+-++|++.| +.+++.+|.|.|+.++|-||+|+.
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHHH
Confidence 53 233456777888888999999988 779999999999999999999974
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.88 E-value=1.2e-22 Score=182.12 Aligned_cols=146 Identities=20% Similarity=0.195 Sum_probs=113.0
Q ss_pred ceeeeeeeeecCcEEEEEEE-ECCCCcEEEEEEeecCCccCC----------------------ccchHHHHHHHHHhcC
Q 015948 13 RYLKREVLGEGTYGVVYKAI-DTKTGQTVAIKKIRLGKQKEG----------------------VNFTALREIKLLKELK 69 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~-~~~~~~~~aiK~i~~~~~~~~----------------------~~~~~~~E~~~l~~l~ 69 (397)
-|.+.+.||+|+||.||+|. +..+|+.||||+++....... ....+.+|+.+++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 778999999999986432110 0112457999999997
Q ss_pred CC--CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC-ccccCCCCCcEEEcc
Q 015948 70 SP--HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDMKPNNLLIGS 146 (397)
Q Consensus 70 hp--~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~-ivHrDlkp~NILl~~ 146 (397)
+. .+.++++. ...|+||||++|+.+.........+....+..++.||+.+|.+||++| |+||||||+||+++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 53 34444442 234899999998543333223344677778899999999999999999 99999999999999
Q ss_pred CCcEEEeeeccceeeCC
Q 015948 147 HGQLKLADFGLARIFGS 163 (397)
Q Consensus 147 ~~~~kl~DFG~a~~~~~ 163 (397)
++.++|+|||.|...+.
T Consensus 184 ~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 184 DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CCCEEEEEChhhhccCC
Confidence 88999999999986544
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.8e-22 Score=175.10 Aligned_cols=241 Identities=16% Similarity=0.196 Sum_probs=188.0
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEcc
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
..+..+|.+...|..|+|++. |..++.|++............+..|.-.|+-++||||+.+++++....++.++..||
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 345567788889999999765 456677888776666666667888999999999999999999999999999999999
Q ss_pred c-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCcEEEccCCcEEEe--eeccceeeCCCCCc
Q 015948 94 E-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLA--DFGLARIFGSPDRR 167 (397)
Q Consensus 94 ~-g~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~--ivHrDlkp~NILl~~~~~~kl~--DFG~a~~~~~~~~~ 167 (397)
+ |+|+..+..... -.+-.++..++..++.|+.|||+.- |.--.|....++|+++-+.+|. |--++. .
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--q----- 342 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--Q----- 342 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee--e-----
Confidence 9 899999987643 3677889999999999999999875 5555688999999998776653 322221 1
Q ss_pred ccccccCceeeChhcccCccC--CCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 168 FTHQVFARWYRAPELLFGAKQ--YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 168 ~~~~~~t~~y~aPE~l~~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
.......+.||+||.+..... .-.++|+|||++++|||.|...||..-+.-+.-.+|.-.
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale------------------ 404 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE------------------ 404 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc------------------
Confidence 112334677999999965332 236789999999999999999999988776655554211
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHh
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 289 (397)
.---.++|++|..+..|+.-|+..||.+||....++
T Consensus 405 --------glrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 405 --------GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred --------cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 001245678899999999999999999999887654
No 425
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.1e-22 Score=203.74 Aligned_cols=263 Identities=25% Similarity=0.383 Sum_probs=207.3
Q ss_pred hcceeeeeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEE
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~l 88 (397)
...|.+.+.||+|+|+.|-++.... ....+|.|.+............+..|..+-+.++ |.|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 4578899999999999999887643 3346777766554433333344456888888887 9999999999999999999
Q ss_pred EEEcccc-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhH-hCCccccCCCCCcEEEccCC-cEEEeeeccceeeCC-
Q 015948 89 VFEFMET-DLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGS- 163 (397)
Q Consensus 89 v~e~~~g-~L~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH-~~~ivHrDlkp~NILl~~~~-~~kl~DFG~a~~~~~- 163 (397)
+++|..| ++...+...+. ..+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .++++|||+|..+..
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 9999885 66666623443 6888899999999999999999 99999999999999999999 999999999988755
Q ss_pred C--CCccccccc-CceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCC
Q 015948 164 P--DRRFTHQVF-ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (397)
Q Consensus 164 ~--~~~~~~~~~-t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 240 (397)
. .......+| ++.|+|||...+........|+||.|+++..|++|..|+......+... ..|.
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-----------~~~~--- 244 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-----------SSWK--- 244 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-----------eeec---
Confidence 2 234456677 8999999999886677889999999999999999998877654332110 0011
Q ss_pred CCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
..........+..++..+.+++.+++..+|..|.+.+++..++|+..
T Consensus 245 ---------~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 245 ---------SNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ---------ccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 01111112344567899999999999999999999999999999987
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.84 E-value=9.4e-22 Score=185.53 Aligned_cols=177 Identities=28% Similarity=0.416 Sum_probs=132.8
Q ss_pred CeEEEEEEccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 84 GNLHLVFEFME-TDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 84 ~~~~lv~e~~~-g~L~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
.++||.|++|. ++|.++++.+ ....+......++.|+..|++| +|.+|+|+||.||+...+..+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 46899999999 6888888643 2346677889999999999999 9999999999999999999999999999987
Q ss_pred eCCCC------CcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCC
Q 015948 161 FGSPD------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATP 233 (397)
Q Consensus 161 ~~~~~------~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~ 233 (397)
..... ...+..+||.+||+||++.+ ..|+.++||||||+|||||+.- ...|. ....+..+..
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~------- 474 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFE---RIATLTDIRD------- 474 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhhc-------
Confidence 64433 35677899999999999987 7799999999999999999961 11111 1111111111
Q ss_pred CCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCC
Q 015948 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYF 294 (397)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 294 (397)
..|| ..+-.--+.-.+|+.+||...|.+||++.+.-.|.|.
T Consensus 475 g~ip--------------------~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 475 GIIP--------------------PEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred CCCC--------------------hHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 1111 0000113456789999999999999977776666664
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.83 E-value=3.7e-20 Score=162.25 Aligned_cols=139 Identities=22% Similarity=0.271 Sum_probs=107.5
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC--------------------ccchHHHHHHHHHhcCCC--
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--------------------VNFTALREIKLLKELKSP-- 71 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~--------------------~~~~~~~E~~~l~~l~hp-- 71 (397)
|.+.+.||+|+||.||+|.+. +|+.||||+++....... ......+|+.++..+.+.
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888999999999999999874 799999999875431100 011245789999999777
Q ss_pred CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (397)
Q Consensus 72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k 151 (397)
.+...++. ...++||||++|..+..+.. ......++.+|+.++.++|+.||+||||||+||+++.++.++
T Consensus 96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPIDW----NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceeec----CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 44555442 34589999999744333321 134567889999999999999999999999999999999999
Q ss_pred EeeeccceeeCC
Q 015948 152 LADFGLARIFGS 163 (397)
Q Consensus 152 l~DFG~a~~~~~ 163 (397)
|+|||++.....
T Consensus 166 liDfg~~~~~~~ 177 (198)
T cd05144 166 IIDWPQMVSTDH 177 (198)
T ss_pred EEECCccccCCC
Confidence 999999976544
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=8.5e-20 Score=161.56 Aligned_cols=135 Identities=19% Similarity=0.267 Sum_probs=109.7
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
+.||+|++|.||+|.+ .|..+++|+......... ....+.+|+.++..+.|++|.....++......++|||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 6799999999999976 678899997653322111 11245689999999999998777667667778899999
Q ss_pred cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 92 ~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
|++| +|.+.+.... . ....++.+++.+|.++|+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 80 ~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9986 6766665422 2 7788999999999999999999999999999999 78899999999875
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.80 E-value=2.5e-19 Score=157.02 Aligned_cols=132 Identities=20% Similarity=0.289 Sum_probs=101.8
Q ss_pred eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC------ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
.||+|+||.||+|. ..|..+++|+......... ...++.+|++++..+.|+++....-++......++||||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 48999999999997 4678899998654322111 113456799999999987655444444456667899999
Q ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 93 ~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
++| +|...+.... . .++.+++.+|.+||+.|++|+|++|+||+++ ++.++++|||++...
T Consensus 79 ~~g~~l~~~~~~~~-----~---~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 79 IEGKPLKDVIEEGN-----D---ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred ECCccHHHHHhhcH-----H---HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 986 5665554321 1 7899999999999999999999999999999 889999999998763
No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.80 E-value=3.3e-19 Score=154.68 Aligned_cols=139 Identities=24% Similarity=0.310 Sum_probs=100.3
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccch----------------------HHHHHHHHHhcCCCC-
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT----------------------ALREIKLLKELKSPH- 72 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~----------------------~~~E~~~l~~l~hp~- 72 (397)
+.+.||+|+||+||+|.+. +|+.||||+++........... ...|...+..+.+..
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999886 7899999998764322111111 135666666665433
Q ss_pred -eeEEEeeeecCCeEEEEEEcccc-CHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCcEEEccCC
Q 015948 73 -IIELIDAFPHKGNLHLVFEFMET-DLE-TVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHG 148 (397)
Q Consensus 73 -iv~l~~~~~~~~~~~lv~e~~~g-~L~-~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~NILl~~~~ 148 (397)
+.+.++. ...++||||++| .+. ..+.... . ...+..++.+++.++.++|. +||+|+||||+||+++ ++
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 4444443 235899999997 221 1111111 1 16778899999999999999 9999999999999999 89
Q ss_pred cEEEeeeccceeeCC
Q 015948 149 QLKLADFGLARIFGS 163 (397)
Q Consensus 149 ~~kl~DFG~a~~~~~ 163 (397)
.++|+|||.+.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 999999999976543
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.79 E-value=7.1e-19 Score=176.69 Aligned_cols=139 Identities=19% Similarity=0.236 Sum_probs=108.5
Q ss_pred hcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC------CccchHHHHHHHHHhcCCCCeeEEEeeeecCC
Q 015948 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE------GVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~------~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 84 (397)
...|...+.||+|+||+||++.... ..+++|+........ .....+.+|+.+++.++|++|+....++....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3455678999999999999997643 344555432211111 11234678999999999999988777776777
Q ss_pred eEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 85 ~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
..++||||++| +|.+.+. ....++.+++.+|.+||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 78999999986 6666554 346789999999999999999999999999999 6788999999999763
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=4.3e-19 Score=170.54 Aligned_cols=205 Identities=24% Similarity=0.311 Sum_probs=154.8
Q ss_pred HHhcCCCCeeEEEeeeecCCeEEEEEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCc-cccCCCCCcE
Q 015948 65 LKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV-LHRDMKPNNL 142 (397)
Q Consensus 65 l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i-vHrDlkp~NI 142 (397)
|+.+.|.|+.++++.+-++...++|.+||. |+|.+.+......++.--...+++.|+.||.|||+.-| .|+.++..|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 467899999999999999999999999999 89999998877778888888999999999999998865 9999999999
Q ss_pred EEccCCcEEEeeeccceeeCCC--CCcccccccCceeeChhcccCccC------CCCcchHHHHHHHHHHHHhCCCCCCC
Q 015948 143 LIGSHGQLKLADFGLARIFGSP--DRRFTHQVFARWYRAPELLFGAKQ------YGAGVDVWAAGCIFAELLNRRPFLQG 214 (397)
Q Consensus 143 Ll~~~~~~kl~DFG~a~~~~~~--~~~~~~~~~t~~y~aPE~l~~~~~------~~~~~DiwSlG~il~ell~g~~pf~~ 214 (397)
+++....+||+|||+....... ........-...|.|||.+.+... -+.+.|+||||+++||+++...||..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 9999999999999998776321 111111112345999999976321 36679999999999999999999976
Q ss_pred CCc----HHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhc
Q 015948 215 SSD----IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (397)
Q Consensus 215 ~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 290 (397)
... .+.+..+.. .+..... |+. .... ...+++..++..|+..+|.+||+++++-.
T Consensus 161 ~~~~~~~~eii~~~~~-~~~~~~r--P~i-----------------~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 161 RNLVEDPDEIILRVKK-GGSNPFR--PSI-----------------ELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ccccCChHHHHHHHHh-cCCCCcC--cch-----------------hhhh-hcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 322 123333222 1111111 110 0000 22457999999999999999999988754
No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=4.3e-19 Score=170.65 Aligned_cols=261 Identities=21% Similarity=0.240 Sum_probs=205.1
Q ss_pred Chhhhcceeeeeeeee--cCcEEEEEEEE--CCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeee
Q 015948 7 SKKVADRYLKREVLGE--GTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP 81 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~--G~~g~Vy~a~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~ 81 (397)
.......+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+..........+-++|+...+.+ .|+|.++.+..|+
T Consensus 109 ~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 109 DSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred cchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence 3445778889999999 99999999988 78889999998554444333334445788777777 5899999999999
Q ss_pred cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHH----HHHHhHhCCccccCCCCCcEEEccC-CcEEEeeec
Q 015948 82 HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK----GLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFG 156 (397)
Q Consensus 82 ~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~----aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG 156 (397)
..+..|+-+|+|+.+|..+.......+++..++.++.+... ||.++|+.+++|-|+||+||++..+ ..++++|||
T Consensus 189 ~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 189 GSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred cCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 99999999999999999999888878999999999999999 9999999999999999999999999 889999999
Q ss_pred cceeeCCCCCccccc-----ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 015948 157 LARIFGSPDRRFTHQ-----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231 (397)
Q Consensus 157 ~a~~~~~~~~~~~~~-----~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 231 (397)
+...+++..-..... .+..-|++||++.+ -++...|+++||-++.+-.++...+....
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~--------------- 331 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGK--------------- 331 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCC---------------
Confidence 998887655222211 44455999999865 57899999999999999988865543220
Q ss_pred CCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
...|-.+.... ....+....+.++...+..||+.+|..|++++.++.|++...
T Consensus 332 -~~~W~~~r~~~-----------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 332 -NSSWSQLRQGY-----------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred -CCCcccccccc-----------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 01111111000 001223344677777999999999999999999999998764
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.76 E-value=8.6e-18 Score=150.99 Aligned_cols=136 Identities=24% Similarity=0.314 Sum_probs=102.8
Q ss_pred eeeee-ecCcEEEEEEEECCCCcEEEEEEeecCCc-----c------CCccchHHHHHHHHHhcCCCCe--eEEEeeeec
Q 015948 17 REVLG-EGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-----K------EGVNFTALREIKLLKELKSPHI--IELIDAFPH 82 (397)
Q Consensus 17 ~~~LG-~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-----~------~~~~~~~~~E~~~l~~l~hp~i--v~l~~~~~~ 82 (397)
...|| .||.|+||.+... +..++||.+..... . ......+.+|+.++..|.|++| ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 34677 8899999999654 78899998854221 1 1122356789999999998775 666665433
Q ss_pred C-Ce---EEEEEEcccc--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeec
Q 015948 83 K-GN---LHLVFEFMET--DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG 156 (397)
Q Consensus 83 ~-~~---~~lv~e~~~g--~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG 156 (397)
. +. .++||||++| +|...+... .+++.. +.+|+.+|.+||++||+||||||+|||++.++.++|+|||
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEA--PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2 22 3599999996 676666542 355543 5789999999999999999999999999999999999999
Q ss_pred ccee
Q 015948 157 LARI 160 (397)
Q Consensus 157 ~a~~ 160 (397)
.++.
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 9875
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.73 E-value=2.3e-17 Score=137.22 Aligned_cols=132 Identities=19% Similarity=0.220 Sum_probs=110.0
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CCeeEEEeeeecCCeEEEEEEcc
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~~~~~~~~~~lv~e~~ 93 (397)
+.+.||.|.++.||++.... ..+++|....... ...+.+|+.+++.+++ .++.+++.++..++..+++|||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 46789999999999998743 7899998754432 3457789999999977 58999999988888999999999
Q ss_pred ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC---CccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK---WVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 94 ~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
.|.....+ +......++.+++.+|.++|.. +++|+|++|+||+++..+.++++|||.++.
T Consensus 76 ~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 87533322 4566677899999999999985 799999999999999989999999999864
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.71 E-value=4e-18 Score=172.06 Aligned_cols=267 Identities=25% Similarity=0.379 Sum_probs=207.0
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-ccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 88 (397)
-.+.+.+.+-+-+|.++.++.+.-..+|..+++|+......-.. ....+..+-.++-.-.+|.++...-.|.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 35778888899999999999998888888888887655432222 23334445555555567888877766777888999
Q ss_pred EEEccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCC---
Q 015948 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP--- 164 (397)
Q Consensus 89 v~e~~~-g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~--- 164 (397)
|++|++ +++...+++.. ..+++.++.++..+..+++|||...+.|+|++|.|+|+..+|+.+++|||.....+..
T Consensus 882 ~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 999998 57888877655 4788889999999999999999999999999999999999999999999854322100
Q ss_pred ----------------------------CCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 015948 165 ----------------------------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS 216 (397)
Q Consensus 165 ----------------------------~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 216 (397)
.......++|+.|.+||.+.+ ...+..+|+|++|++++|.++|.+||....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 011234567888999999988 557889999999999999999999999887
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHH---HHhcCCC
Q 015948 217 DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ---QALEHRY 293 (397)
Q Consensus 217 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~---e~l~hp~ 293 (397)
.......|... ...|++. ....+.++.+++.++|..+|.+|.++. ++-.|+|
T Consensus 1040 pq~~f~ni~~~-----~~~~p~g--------------------~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~ 1094 (1205)
T KOG0606|consen 1040 PQQIFENILNR-----DIPWPEG--------------------PEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPF 1094 (1205)
T ss_pred hhhhhhccccC-----CCCCCCC--------------------ccccChhhhhhhhhhhccCchhccCcccccccccCCc
Confidence 77665554332 1223322 123478999999999999999999877 8899999
Q ss_pred CCCCCCCCCC
Q 015948 294 FSSAPLPTEP 303 (397)
Q Consensus 294 ~~~~~~~~~~ 303 (397)
|+...|....
T Consensus 1095 ~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1095 FQDVDWENLA 1104 (1205)
T ss_pred cCCCCccccc
Confidence 9998876543
No 437
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.63 E-value=4.7e-15 Score=144.33 Aligned_cols=183 Identities=22% Similarity=0.341 Sum_probs=135.5
Q ss_pred eeeeeeeeecCcEEEE-EEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEc
Q 015948 14 YLKREVLGEGTYGVVY-KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy-~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~ 92 (397)
|.+ +..+-++.+ +| .|..+.++..+.|.+...... .....+.+-++-|+.++||||+++++.++.++.+|+|+|-
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTEr 90 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTER 90 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeec
Confidence 444 444444443 34 466677889999998875544 3334567888999999999999999999999999999998
Q ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhH-hCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccccc
Q 015948 93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (397)
Q Consensus 93 ~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH-~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~ 171 (397)
+.. |...+.+ ++...+...++||+.||-||| +++++|++|.-..|+|+..|+.||++|.++.............
T Consensus 91 V~P-l~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~ 165 (690)
T KOG1243|consen 91 VRP-LETVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSL 165 (690)
T ss_pred ccc-HHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccc
Confidence 862 2233333 336777888999999999997 6789999999999999999999999999987653332111111
Q ss_pred ccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhC
Q 015948 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR 208 (397)
Q Consensus 172 ~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g 208 (397)
..-..|..|+.+.. -+-..|.|.|||+++|++.|
T Consensus 166 ~~~~s~~~P~~~~~---s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 166 YLIESFDDPEEIDP---SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhcccChhhcCc---cccchhhhhHHHHHHHHhCc
Confidence 11122777876533 22568999999999999999
No 438
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.61 E-value=9.5e-15 Score=125.78 Aligned_cols=142 Identities=18% Similarity=0.179 Sum_probs=103.1
Q ss_pred eeeeeecCcEEEEEEEECC------CCcEEEEEEeecCCc-----------cCCc---------cch----HHHHHHHHH
Q 015948 17 REVLGEGTYGVVYKAIDTK------TGQTVAIKKIRLGKQ-----------KEGV---------NFT----ALREIKLLK 66 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~------~~~~~aiK~i~~~~~-----------~~~~---------~~~----~~~E~~~l~ 66 (397)
...||.|.-+.||.|.... .+..+|||+.+.... .... ... +.+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4679999999999997653 357999998864321 1000 111 237999999
Q ss_pred hcCC--CCeeEEEeeeecCCeEEEEEEccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCcE
Q 015948 67 ELKS--PHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNL 142 (397)
Q Consensus 67 ~l~h--p~iv~l~~~~~~~~~~~lv~e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l-H~~~ivHrDlkp~NI 142 (397)
++.. -++.+++++ ..-+|||||++|+ +.....+ +..+++..+..+..+++.+|..| |+.|++|+||++.||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI 156 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM 156 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 9854 456666654 3457999999864 3221111 22366677788899999999999 899999999999999
Q ss_pred EEccCCcEEEeeeccceeeCCC
Q 015948 143 LIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 143 Ll~~~~~~kl~DFG~a~~~~~~ 164 (397)
|+. ++.+.|+|||.+.....+
T Consensus 157 L~~-~~~v~iIDF~qav~~~hp 177 (197)
T cd05146 157 LWH-DGKVWFIDVSQSVEPTHP 177 (197)
T ss_pred EEE-CCcEEEEECCCceeCCCC
Confidence 996 577999999999876543
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.60 E-value=8e-16 Score=151.69 Aligned_cols=146 Identities=18% Similarity=0.271 Sum_probs=95.6
Q ss_pred hhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc---------------------C-----------Cccch
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---------------------E-----------GVNFT 57 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---------------------~-----------~~~~~ 57 (397)
+...|.. +.||+|++|.||+|+.+.+|+.||||+++..... . +....
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 4556776 8999999999999999888999999999754210 0 00111
Q ss_pred HH------HHHHHHHhcC----CCCeeEEEeee-ecCCeEEEEEEcccc-CHHHH--HHhcCC---CCCHHHHHHHHHHH
Q 015948 58 AL------REIKLLKELK----SPHIIELIDAF-PHKGNLHLVFEFMET-DLETV--IRNTNI---FLSPADIKSYMQMT 120 (397)
Q Consensus 58 ~~------~E~~~l~~l~----hp~iv~l~~~~-~~~~~~~lv~e~~~g-~L~~~--~~~~~~---~l~~~~~~~~~~qi 120 (397)
+. +|+.-+.++. +...+.+-..| +.....++||||+.| .+.+. +...+. .+.+..+..++.|+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 22 3333333331 22222222222 123456799999997 55442 232221 24455555666665
Q ss_pred HHHHHHhHhCCccccCCCCCcEEEccCC----cEEEeeeccceeeCC
Q 015948 121 LKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLARIFGS 163 (397)
Q Consensus 121 l~aL~~lH~~~ivHrDlkp~NILl~~~~----~~kl~DFG~a~~~~~ 163 (397)
+ ..|++|+|+||.||+++.+| +++++|||++..++.
T Consensus 277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4 58999999999999999988 999999999987744
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.57 E-value=1.7e-14 Score=140.63 Aligned_cols=142 Identities=20% Similarity=0.266 Sum_probs=93.6
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCC-----------------------c---------------cchH
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-----------------------V---------------NFTA 58 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~-----------------------~---------------~~~~ 58 (397)
.+.||+|++|.||+|+.+ +|+.||||+.+......- . ...+
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 367999999999999864 789999999865421000 0 0123
Q ss_pred HHHHHHHHhcC----C-CCeeEEEeeeecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHH-HHHHhHhCC
Q 015948 59 LREIKLLKELK----S-PHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLK-GLAFCHKKW 131 (397)
Q Consensus 59 ~~E~~~l~~l~----h-p~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~-aL~~lH~~~ 131 (397)
.+|...+.++. + ++|.-..-++...+..++||||++| ++.+.......... ...++..++. .+..+|..|
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence 34555555542 2 3332111122234457899999997 45444332211122 2345555555 478899999
Q ss_pred ccccCCCCCcEEEccCCcEEEeeeccceeeC
Q 015948 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (397)
Q Consensus 132 ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~ 162 (397)
++|+|+||.||+++.+|+++|+|||++..++
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999998764
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=2.6e-15 Score=144.71 Aligned_cols=253 Identities=19% Similarity=0.170 Sum_probs=184.9
Q ss_pred hhcceeeeeeeeecCcEEEEEEEEC-CCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEeeeecCCeEE
Q 015948 10 VADRYLKREVLGEGTYGVVYKAIDT-KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 10 ~~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~ 87 (397)
...+|-.+..||.|.|+.|+.+... .++..|++|.+.............+.|+.+...+ .|.+++..+..|....+.|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3567888999999999999998644 5678999998877665554444556788887777 5899999999998888889
Q ss_pred EEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccC-CcEEEeeeccceeeCCCCC
Q 015948 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDR 166 (397)
Q Consensus 88 lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~-~~~kl~DFG~a~~~~~~~~ 166 (397)
+=.|||.|....+-....-.+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||..+.+.- .
T Consensus 343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~--~ 420 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF--S 420 (524)
T ss_pred CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce--e
Confidence 999999853333222222338889999999999999999999999999999999999886 7889999998865311 1
Q ss_pred cccccccCceee-ChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccc
Q 015948 167 RFTHQVFARWYR-APELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (397)
Q Consensus 167 ~~~~~~~t~~y~-aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 245 (397)
. ......-++. ..|++.....+..++|++|||.-+.+.+++.++-...... ..|+..
T Consensus 421 ~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i~~~------------------ 478 (524)
T KOG0601|consen 421 S-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTIRSG------------------ 478 (524)
T ss_pred c-ccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---eeeecc------------------
Confidence 1 1112222244 3566655577889999999999999999998653221111 011000
Q ss_pred cccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCC
Q 015948 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSS 296 (397)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 296 (397)
.....+..+..+..+...++..++..|+.+.++..|.-|..
T Consensus 479 ----------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 479 ----------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ----------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 00111233467788889999999999999999988876643
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.53 E-value=4.6e-14 Score=120.20 Aligned_cols=128 Identities=20% Similarity=0.158 Sum_probs=94.4
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeEEEEEEcccc
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~~lv~e~~~g 95 (397)
.+.|+.|.++.||++... +..|++|....... ......+|+.+++.+.+.+++ +++.... ...++||||++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence 467899999999999754 78899998754321 122456899999998765544 4554443 234799999998
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCc-----cccCCCCCcEEEccCCcEEEeeecccee
Q 015948 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV-----LHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 96 ~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i-----vHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
...... ......++.+++.+|+.||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Cccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 433211 01123457899999999999985 9999999999998 67899999999863
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=1.1e-14 Score=130.10 Aligned_cols=203 Identities=15% Similarity=0.196 Sum_probs=137.8
Q ss_pred HHHHHhcCCCCeeEEEeeeecCC-----eEEEEEEccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhHhCC-
Q 015948 62 IKLLKELKSPHIIELIDAFPHKG-----NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKW- 131 (397)
Q Consensus 62 ~~~l~~l~hp~iv~l~~~~~~~~-----~~~lv~e~~~-g~L~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~- 131 (397)
..-|-++-|.|||+++.+|.+.. ...++.||+. |.+.+++++. ...+....-+.|+.||+.||.|||+..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 34566677999999999985543 5788999998 7887777653 344778888999999999999999885
Q ss_pred -ccccCCCCCcEEEccCCcEEEeeeccceeeCC----CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHH
Q 015948 132 -VLHRDMKPNNLLIGSHGQLKLADFGLARIFGS----PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206 (397)
Q Consensus 132 -ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~----~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell 206 (397)
|+|+++..+-|++..+|-+|+.--........ .........+-++|.+||.=.. .+.+.++|||+||....+|.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHHHHH
Confidence 99999999999999888777753221111000 0011112233466889986432 34667899999999999998
Q ss_pred hCCCC-CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCH
Q 015948 207 NRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285 (397)
Q Consensus 207 ~g~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~ 285 (397)
.+..- -.+.+....-..+... ++..-.+--+++|.+||.-.|..||++
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~-------------------------------i~~len~lqr~~i~kcl~~eP~~rp~a 325 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANV-------------------------------IIGLENGLQRGSITKCLEGEPNGRPDA 325 (458)
T ss_pred HheeccCCCcceeehhhhhhhh-------------------------------eeeccCccccCcCcccccCCCCCCcch
Confidence 76531 2222211111111110 000001233578999999999999999
Q ss_pred HHHhcCCCCCC
Q 015948 286 QQALEHRYFSS 296 (397)
Q Consensus 286 ~e~l~hp~~~~ 296 (397)
.+++.||..-.
T Consensus 326 r~llfHpllfe 336 (458)
T KOG1266|consen 326 RLLLFHPLLFE 336 (458)
T ss_pred hhhhcCceeee
Confidence 99999998643
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.43 E-value=7.6e-12 Score=118.68 Aligned_cols=213 Identities=14% Similarity=0.186 Sum_probs=157.1
Q ss_pred CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCeeEEEeeeec----CCeEEEEEEcccc--CH
Q 015948 24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH----KGNLHLVFEFMET--DL 97 (397)
Q Consensus 24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~~~~lv~e~~~g--~L 97 (397)
.-.+.|+|....+|..|++|.++..+..... ....-+++++++.|.|||++.++|.. +..+++|++|.++ +|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n--k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN--KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcc--cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 3468899999999999999999543322211 23357899999999999999998863 4468999999984 67
Q ss_pred HHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 98 ETVIRN--------------TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 98 ~~~~~~--------------~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
+++.-. .+...+|..+|.|+.||..||.++|+.|+..+-|.|.+||++.+.+++|...|+.-.+..
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 766532 233478899999999999999999999999999999999999888999998888776543
Q ss_pred CCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCC-CCCCCcHHHHHHHHHHhCCCCCCCCCCCCCC
Q 015948 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (397)
Q Consensus 164 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 242 (397)
.. . |-+.+ -.+-|.=.||.+++.|.+|..= +........
T Consensus 446 d~------------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s---------------------- 485 (655)
T KOG3741|consen 446 DP------------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSS---------------------- 485 (655)
T ss_pred CC------------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHH----------------------
Confidence 32 0 11111 2356999999999999999631 000111100
Q ss_pred ccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcC
Q 015948 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (397)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 291 (397)
.++.+.+..|.+++++|..+...++++ -+..+++.+
T Consensus 486 ------------~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 486 ------------HLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred ------------HHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 012333455899999999999999886 667776654
No 445
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.38 E-value=8.7e-12 Score=103.53 Aligned_cols=143 Identities=20% Similarity=0.249 Sum_probs=104.8
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCc-----cchHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEE
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGV-----NFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~-----~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 89 (397)
....|-+|+-+.|+++ ...|+.+.||.-.... ..+.. ..+..+|+.+|.++.--.|.-..-+|-+...-+|+
T Consensus 11 ~l~likQGAEArv~~~--~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRG--SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeee--ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 6788899999999999 4568888888643222 11211 23445799999998644443333344455556789
Q ss_pred EEcccc--CHHHHHHhcCCCCCHHH-HHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc---EEEeeecccee
Q 015948 90 FEFMET--DLETVIRNTNIFLSPAD-IKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ---LKLADFGLARI 160 (397)
Q Consensus 90 ~e~~~g--~L~~~~~~~~~~l~~~~-~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~---~kl~DFG~a~~ 160 (397)
|||++| .+.+++......-.++. ...+++.|-+.+.-||.++|+|+||..+||++..+|. +.++|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999998 78888877543333333 3788999999999999999999999999999987653 58999999865
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.33 E-value=1.2e-11 Score=109.97 Aligned_cols=140 Identities=19% Similarity=0.268 Sum_probs=102.1
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCC--CeeEEEeeeecC---CeEEEEEE
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP--HIIELIDAFPHK---GNLHLVFE 91 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp--~iv~l~~~~~~~---~~~~lv~e 91 (397)
.+.||.|..+.||++... +|+.|++|........ .....+.+|+.+++.+.+. .+.+++.+.... +..++|||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 367899999999999764 3688999987654322 2344677899999999763 456677766553 36789999
Q ss_pred ccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-----------------------------------------
Q 015948 92 FMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK----------------------------------------- 129 (397)
Q Consensus 92 ~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~----------------------------------------- 129 (397)
|++|. +...+.. ..+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 81 RVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99974 3332221 236666667777777777777773
Q ss_pred ---------------CCccccCCCCCcEEEcc--CCcEEEeeecccee
Q 015948 130 ---------------KWVLHRDMKPNNLLIGS--HGQLKLADFGLARI 160 (397)
Q Consensus 130 ---------------~~ivHrDlkp~NILl~~--~~~~kl~DFG~a~~ 160 (397)
..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 34699999999999998 66789999998864
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=1.7e-11 Score=102.30 Aligned_cols=132 Identities=17% Similarity=0.281 Sum_probs=91.2
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCC-ccCCcc-----chHHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEE
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVN-----FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-~~~~~~-----~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e 91 (397)
..+++|+-+.+|.+.. -|..+++|.-.... ..+... .+..+|+.++..+.--.|...+=++.+.....|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999944 45556666432211 222222 234579999999865444333333334556679999
Q ss_pred ccccCHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 92 FMETDLET-VIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 92 ~~~g~L~~-~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
|++|.++. .+... . ..+++.+-.-+.-||..||+|+||.++||++..++ +.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99997666 44443 1 44566666777899999999999999999997655 99999999974
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.24 E-value=4.2e-11 Score=102.81 Aligned_cols=129 Identities=26% Similarity=0.353 Sum_probs=83.8
Q ss_pred EEEEEEECCCCcEEEEEEeecCCcc-----------CC-------------ccchHHHHHHHHHhcCCC--CeeEEEeee
Q 015948 27 VVYKAIDTKTGQTVAIKKIRLGKQK-----------EG-------------VNFTALREIKLLKELKSP--HIIELIDAF 80 (397)
Q Consensus 27 ~Vy~a~~~~~~~~~aiK~i~~~~~~-----------~~-------------~~~~~~~E~~~l~~l~hp--~iv~l~~~~ 80 (397)
.||.|... .|..+|||..+..... .. ......+|...|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48999864 6779999988653210 00 012345799999999765 456666553
Q ss_pred ecCCeEEEEEEccc--cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-hHhCCccccCCCCCcEEEccCCcEEEeeecc
Q 015948 81 PHKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF-CHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (397)
Q Consensus 81 ~~~~~~~lv~e~~~--g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~-lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~ 157 (397)
. -+|||||++ |..+..+.... ++......++.+++..+.. +|+.||+|+||.+.|||++.+ .+.|+|||.
T Consensus 80 ~----~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 R----NVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp T----TEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred C----CEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence 2 359999999 74444444432 2245567778888885555 589999999999999999877 799999999
Q ss_pred ceeeCC
Q 015948 158 ARIFGS 163 (397)
Q Consensus 158 a~~~~~ 163 (397)
+.....
T Consensus 153 av~~~~ 158 (188)
T PF01163_consen 153 AVDSSH 158 (188)
T ss_dssp EEETTS
T ss_pred ceecCC
Confidence 886543
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=7.1e-12 Score=122.88 Aligned_cols=157 Identities=20% Similarity=0.318 Sum_probs=116.9
Q ss_pred HHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeeccceeeCCCCC----cc-----cccccCceeeChhcccCccCC
Q 015948 120 TLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----RF-----THQVFARWYRAPELLFGAKQY 189 (397)
Q Consensus 120 il~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~----~~-----~~~~~t~~y~aPE~l~~~~~~ 189 (397)
...||.|+|.. ++||++|.|++|.++..|..||+.|+++.....+.. .+ ........|.|||.+.+ ...
T Consensus 108 v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~~ 186 (700)
T KOG2137|consen 108 VADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TTN 186 (700)
T ss_pred ccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-ccc
Confidence 34899999966 899999999999999999999999999876543221 00 01112345999999987 667
Q ss_pred CCcchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHH
Q 015948 190 GAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDAL 268 (397)
Q Consensus 190 ~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 268 (397)
+.++|++||||++|.+. +|+..+.+.........-...++. .....-..++.+++
T Consensus 187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~------------------------~~~~~s~~~p~el~ 242 (700)
T KOG2137|consen 187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA------------------------GAFGYSNNLPSELR 242 (700)
T ss_pred cccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc------------------------ccccccccCcHHHH
Confidence 89999999999999998 678877766544333222111110 01112245689999
Q ss_pred HHHHHhcCcCCCCCCCHHHHhcCCCCCCCCCCC
Q 015948 269 DLLSKMFTYDPKARITAQQALEHRYFSSAPLPT 301 (397)
Q Consensus 269 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 301 (397)
+-+.++|..++..||++.+++..+||++....+
T Consensus 243 ~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~a 275 (700)
T KOG2137|consen 243 ESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLKA 275 (700)
T ss_pred HHHHHHhcCCcccCcchhhhhcccccCCchhhh
Confidence 999999999999999999999999999876544
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.17 E-value=4.2e-10 Score=102.37 Aligned_cols=133 Identities=16% Similarity=0.061 Sum_probs=92.9
Q ss_pred EEEEEEEECCCCcEEEEEEeecCCccC---------CccchHHHHHHHHHhcCCCCe--eEEEeeeec-----CCeEEEE
Q 015948 26 GVVYKAIDTKTGQTVAIKKIRLGKQKE---------GVNFTALREIKLLKELKSPHI--IELIDAFPH-----KGNLHLV 89 (397)
Q Consensus 26 g~Vy~a~~~~~~~~~aiK~i~~~~~~~---------~~~~~~~~E~~~l~~l~hp~i--v~l~~~~~~-----~~~~~lv 89 (397)
..|+++. -.|+.|.||......... .-...+.+|...+..|..-+| .+++.+++. ...-++|
T Consensus 36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 3455553 356789999663322110 011136789998888843333 333444432 2357899
Q ss_pred EEcccc--CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEcc-------CCcEEEeeeccce
Q 015948 90 FEFMET--DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-------HGQLKLADFGLAR 159 (397)
Q Consensus 90 ~e~~~g--~L~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~-------~~~~kl~DFG~a~ 159 (397)
+|+++| +|.+++... ....+......++.+++..+.-||+.||+|+|+++.|||++. ++.+.|+||+.+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999997 577776532 233566778899999999999999999999999999999975 4679999999886
Q ss_pred e
Q 015948 160 I 160 (397)
Q Consensus 160 ~ 160 (397)
.
T Consensus 194 ~ 194 (268)
T PRK15123 194 I 194 (268)
T ss_pred c
Confidence 4
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.11 E-value=3.1e-10 Score=100.31 Aligned_cols=140 Identities=24% Similarity=0.323 Sum_probs=104.4
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCcc--------------CC------ccchHHHHHHHHHhcCCC--
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK--------------EG------VNFTALREIKLLKELKSP-- 71 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~--------------~~------~~~~~~~E~~~l~~l~hp-- 71 (397)
+.+...||-|.-|.||.|.+. .|..+|||.=+..... .. ....+.+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456789999999999999876 7899999965443210 00 112356899999999655
Q ss_pred CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEE
Q 015948 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (397)
Q Consensus 72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~k 151 (397)
.|.+.+++ +...+||||++|-.+..+. ++...+..++..|++-+..+-..||||+|+.+-|||++++|.+.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~ 242 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV 242 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence 66666654 3456999999995444332 23556667777888777777799999999999999999999999
Q ss_pred EeeeccceeeCC
Q 015948 152 LADFGLARIFGS 163 (397)
Q Consensus 152 l~DFG~a~~~~~ 163 (397)
++||--+...+.
T Consensus 243 vIDwPQ~v~~~h 254 (304)
T COG0478 243 VIDWPQAVPISH 254 (304)
T ss_pred EEeCcccccCCC
Confidence 999976665444
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.07 E-value=2.5e-09 Score=93.99 Aligned_cols=105 Identities=21% Similarity=0.285 Sum_probs=81.8
Q ss_pred chHHHHHHHHHhcCCCC--eeEEEeeeecC----CeEEEEEEcccc--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q 015948 56 FTALREIKLLKELKSPH--IIELIDAFPHK----GNLHLVFEFMET--DLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127 (397)
Q Consensus 56 ~~~~~E~~~l~~l~hp~--iv~l~~~~~~~----~~~~lv~e~~~g--~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l 127 (397)
.++.+|...+..|..-. +.+.+.+.+.. ...++|+|+++| +|.+.+..... .+......++.+++..+.-|
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL 134 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence 35778988888885332 34444444332 245899999997 67777765333 66778889999999999999
Q ss_pred HhCCccccCCCCCcEEEccCC---cEEEeeeccceee
Q 015948 128 HKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIF 161 (397)
Q Consensus 128 H~~~ivHrDlkp~NILl~~~~---~~kl~DFG~a~~~ 161 (397)
|++||+|+|+++.|||++.++ .+.|+||+-++..
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999999999999999887 8999999988753
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.91 E-value=2.6e-08 Score=86.20 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=100.2
Q ss_pred eecCcEEEEEEEECCCCcEEEEEEeecCC----ccCCccchHHHHHHHHHhcCCCC--eeEEEeeee---c--CCeEEEE
Q 015948 21 GEGTYGVVYKAIDTKTGQTVAIKKIRLGK----QKEGVNFTALREIKLLKELKSPH--IIELIDAFP---H--KGNLHLV 89 (397)
Q Consensus 21 G~G~~g~Vy~a~~~~~~~~~aiK~i~~~~----~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~~---~--~~~~~lv 89 (397)
|+||.+.|+.... .|+.|=+|.-.... ....-...+.+|+..|..|..-+ +.+++ ++. . .-.-+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 5689999999753 34467778654221 11234457889999999985422 44444 332 1 1246899
Q ss_pred EEcccc--CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCc--EEEeeecccee
Q 015948 90 FEFMET--DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARI 160 (397)
Q Consensus 90 ~e~~~g--~L~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~--~kl~DFG~a~~ 160 (397)
+|-++| +|.+++.+.. .+.++.....++.+++.+++-||+.|+.|+|+-+.|||++.+|. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 999985 7887775532 23567777899999999999999999999999999999987777 99999988765
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.87 E-value=1.1e-08 Score=88.75 Aligned_cols=142 Identities=18% Similarity=0.244 Sum_probs=91.2
Q ss_pred ChhhhcceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCcc-c------hHHHHHHHHHhcCC---CCeeEE
Q 015948 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-F------TALREIKLLKELKS---PHIIEL 76 (397)
Q Consensus 7 ~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~-~------~~~~E~~~l~~l~h---p~iv~l 76 (397)
.+.+.++|.+.+++-......|.+. ...|+.|++|..+......... . ...+++..+.++.. ..++.+
T Consensus 26 ~~i~~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~ 103 (229)
T PF06176_consen 26 EKILDNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADP 103 (229)
T ss_pred HHHHhCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence 3456788999999988887777766 4567899999876433211110 0 11234444444432 233332
Q ss_pred Eee-----eecCCeEEEEEEccccC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948 77 IDA-----FPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (397)
Q Consensus 77 ~~~-----~~~~~~~~lv~e~~~g~-L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~ 150 (397)
+.+ +......++||||++|- |.+... +++ .+...|.+++.-||+.|++|+|..|.|++++.++ +
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i 173 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-I 173 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-E
Confidence 222 22234566899999984 433221 333 2445677789999999999999999999998655 9
Q ss_pred EEeeecccee
Q 015948 151 KLADFGLARI 160 (397)
Q Consensus 151 kl~DFG~a~~ 160 (397)
+++||+..+.
T Consensus 174 ~iID~~~k~~ 183 (229)
T PF06176_consen 174 RIIDTQGKRM 183 (229)
T ss_pred EEEECccccc
Confidence 9999987653
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.86 E-value=4e-08 Score=91.69 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=152.2
Q ss_pred eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhc-CCCCeeEEEee------eecCC-eE
Q 015948 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDA------FPHKG-NL 86 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~------~~~~~-~~ 86 (397)
...+.||+|+-+.+|-.- .-+. .+.|+.......- .. +-+..|... .||-+-.-+.+ ..+.+ ..
T Consensus 14 ~~gr~LgqGgea~ly~l~--e~~d-~VAKIYh~Pppa~----~a-qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG--EVRD-QVAKIYHAPPPAA----QA-QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecc--hhhc-hhheeecCCCchH----HH-HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 346789999999999762 2222 3347665432211 11 122233332 45543321111 12222 36
Q ss_pred EEEEEcccc--CHHHHHH-----hcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 87 HLVFEFMET--DLETVIR-----NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 87 ~lv~e~~~g--~L~~~~~-----~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
-++|..+.| ....++. +.......+-+...++.|+.+.+.||..|.+-+|+.++|+|+++++.+.|+|=..-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 788888886 3333321 112236777888999999999999999999999999999999999999999865443
Q ss_pred eeCCCCCcccccccCceeeChhcccC----ccCCCCcchHHHHHHHHHHHHhC-CCCCCCCCcH----HHHH-HHHHHhC
Q 015948 160 IFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDI----DQLG-KIFAAFG 229 (397)
Q Consensus 160 ~~~~~~~~~~~~~~t~~y~aPE~l~~----~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~----~~~~-~i~~~~~ 229 (397)
.. .........+|...|.+||...- .-.-+...|.|.||+++|+|+.| +.||.|-... .-++ .|..+.-
T Consensus 166 i~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f 244 (637)
T COG4248 166 IN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF 244 (637)
T ss_pred ec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee
Confidence 32 34556667788999999998641 12246778999999999999875 8998764210 0000 1111000
Q ss_pred CCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcC--CCCCCCHH
Q 015948 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYD--PKARITAQ 286 (397)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d--P~~R~t~~ 286 (397)
. +-++ ...-...++...-+..+++++..|..+|+..- +.-|||++
T Consensus 245 ~----------ya~~--~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 245 A----------YASD--QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred e----------echh--ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 0 0000 00001112222223456789999999998753 56899874
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.84 E-value=2.7e-08 Score=87.35 Aligned_cols=149 Identities=22% Similarity=0.201 Sum_probs=100.5
Q ss_pred hhcceeeee---eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc----------------------cchHHHHHHH
Q 015948 10 VADRYLKRE---VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV----------------------NFTALREIKL 64 (397)
Q Consensus 10 ~~~~y~i~~---~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~----------------------~~~~~~E~~~ 64 (397)
+..+..+.. .|.+|.-+.||+|.. ..+..+|+|+.+........ .....+|..-
T Consensus 43 L~~rg~i~~~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~N 121 (268)
T COG1718 43 LLSRGVITELVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRN 121 (268)
T ss_pred HhcCCceeeeEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHH
Confidence 445555544 455778889999964 56789999998754321110 0112357777
Q ss_pred HHhcC--CCCeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCc
Q 015948 65 LKELK--SPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNN 141 (397)
Q Consensus 65 l~~l~--hp~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-~~ivHrDlkp~N 141 (397)
|+++. +-.+.+.+.++. -.|||||++.+..-.-+-....+...++..+..++++.+.-|-. .|+||+||..-|
T Consensus 122 L~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyN 197 (268)
T COG1718 122 LKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYN 197 (268)
T ss_pred HHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhh
Confidence 77764 334455555543 35999999854111111112234555788889999999998876 899999999999
Q ss_pred EEEccCCcEEEeeeccceeeCCC
Q 015948 142 LLIGSHGQLKLADFGLARIFGSP 164 (397)
Q Consensus 142 ILl~~~~~~kl~DFG~a~~~~~~ 164 (397)
||+. ++.+.|+|||-|....++
T Consensus 198 iL~~-~~~p~iID~~QaV~~~hp 219 (268)
T COG1718 198 ILVH-DGEPYIIDVSQAVTIDHP 219 (268)
T ss_pred eEEE-CCeEEEEECccccccCCC
Confidence 9998 888999999999876543
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.74 E-value=1.4e-07 Score=84.04 Aligned_cols=134 Identities=20% Similarity=0.206 Sum_probs=83.2
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEeeeecCCeEEEEEEcccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAFPHKGNLHLVFEFMET 95 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~~~~~~~~lv~e~~~g 95 (397)
..||.|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+.+++.+..+...+|||+++|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 57899999999984 25567888875322 2234678999999986433 46677777777788899999998
Q ss_pred C-HHH-H---------------------HHhcCC-CCCHHH-HHHHHHHH----------HH-HHHHhH----hCCcccc
Q 015948 96 D-LET-V---------------------IRNTNI-FLSPAD-IKSYMQMT----------LK-GLAFCH----KKWVLHR 135 (397)
Q Consensus 96 ~-L~~-~---------------------~~~~~~-~l~~~~-~~~~~~qi----------l~-aL~~lH----~~~ivHr 135 (397)
. ... . ++.-.. ...... ...+..++ .. ...+|. ...++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg 158 (226)
T TIGR02172 79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG 158 (226)
T ss_pred ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence 4 111 0 111000 011111 00110000 11 111221 1247899
Q ss_pred CCCCCcEEEccCCcEEEeeecccee
Q 015948 136 DMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 136 Dlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
|+.|.||+++.++ +.|+||+.+..
T Consensus 159 D~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 159 DFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCCcEEEcCCC-cEEEechhcCc
Confidence 9999999999888 99999998863
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.70 E-value=1e-07 Score=93.95 Aligned_cols=141 Identities=19% Similarity=0.348 Sum_probs=89.9
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccC--------------------C---c---------------cchHH
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE--------------------G---V---------------NFTAL 59 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~--------------------~---~---------------~~~~~ 59 (397)
+.|+.++-|.||+|+-+ +|+.||||+.+..-... . . ...+.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67899999999999875 59999999986542110 0 0 01112
Q ss_pred HHHHHHHhcC-----CCCeeEEEeeeecCCeEEEEEEcccc-CHHHH--HHhcCCCCCHHHHHHHHHHHHHHHHHhHhCC
Q 015948 60 REIKLLKELK-----SPHIIELIDAFPHKGNLHLVFEFMET-DLETV--IRNTNIFLSPADIKSYMQMTLKGLAFCHKKW 131 (397)
Q Consensus 60 ~E~~~l~~l~-----hp~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~--~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ 131 (397)
+|..-+.++. .++|.-.-=+++..+.-.++|||+.| .+.+. +...+ ++...+...+.++ -+.-+=..|
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g--~d~k~ia~~~~~~--f~~q~~~dg 285 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG--IDRKELAELLVRA--FLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC--CCHHHHHHHHHHH--HHHHHHhcC
Confidence 3444444442 24433222234445566899999998 34433 34332 5544433333332 223333489
Q ss_pred ccccCCCCCcEEEccCCcEEEeeeccceeeCC
Q 015948 132 VLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (397)
Q Consensus 132 ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~ 163 (397)
++|.|.+|.||+++.+|++.+.|||+...++.
T Consensus 286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999887644
No 459
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.70 E-value=1.7e-09 Score=105.49 Aligned_cols=247 Identities=16% Similarity=0.144 Sum_probs=167.5
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeEEEEEE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~~lv~e 91 (397)
-|...+-+++|+++++++.+...+.... .+.+... ....-++++|.+++||| .+..++-++.+.+..++++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~ 314 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR 314 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence 3555667889999999999877664444 6655422 23445899999999999 7777777888889999999
Q ss_pred ccccC--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCccc
Q 015948 92 FMETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (397)
Q Consensus 92 ~~~g~--L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~ 169 (397)
++.++ ....+......+..-+...+++.-+.+|+++|+.--+|+| ||+..+ +..+..||+.+..+.... ...
T Consensus 315 i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~ 388 (829)
T KOG0576|consen 315 ICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPR 388 (829)
T ss_pred hhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc-ccc
Confidence 99854 2222222222244455566777778999999998778998 887755 669999999988765443 456
Q ss_pred ccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q 015948 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (397)
Q Consensus 170 ~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (397)
...+++.++|||+... ..+....|.|++|+--.+|.-|-+|-...- ... ...+. -++...+.+.
T Consensus 389 t~~~~~~~~~pev~~~-~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~----~~~g~-----~p~s~~L~~~---- 452 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQE-NTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVL----PMIGN-----GPNSPMLTDK---- 452 (829)
T ss_pred cCCCCCCCCCchhhcc-cccccCCCccCCCcchhhcCCCCCCCCCCc--ccc----CCCCC-----CCCccccchh----
Confidence 6778999999998866 568889999999988778887777643310 000 00000 0000000000
Q ss_pred cccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCCCCCC
Q 015948 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPL 299 (397)
Q Consensus 250 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 299 (397)
..+. ..+-.++...|+..-|..|+...+++-|.+|..-++
T Consensus 453 --------~aw~--~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngCpl 492 (829)
T KOG0576|consen 453 --------SAWS--PVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGCPL 492 (829)
T ss_pred --------hhcC--cccccCCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence 0000 011115777899999999999999998888876543
No 460
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.49 E-value=1.4e-06 Score=85.89 Aligned_cols=152 Identities=21% Similarity=0.302 Sum_probs=94.7
Q ss_pred cChhhhcceee--eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCc-----------------------------
Q 015948 6 LSKKVADRYLK--REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV----------------------------- 54 (397)
Q Consensus 6 ~~~~~~~~y~i--~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~----------------------------- 54 (397)
++..+.+-|.. .+.||.-+.|.|++|+-+. |+.||||+-+..-...-.
T Consensus 153 lG~~ie~if~~f~~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~ 231 (538)
T KOG1235|consen 153 LGAPIEDIFSEFDEEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEI 231 (538)
T ss_pred hCCCHHHHHHhcCcchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHH
Confidence 34444444432 4679999999999998765 999999987654211100
Q ss_pred ------cchHHHHHH----HHHhcCCCC------eeEEEeeeecCCeEEEEEEcccc---CHHHHHHhcCCCCCHHHHHH
Q 015948 55 ------NFTALREIK----LLKELKSPH------IIELIDAFPHKGNLHLVFEFMET---DLETVIRNTNIFLSPADIKS 115 (397)
Q Consensus 55 ------~~~~~~E~~----~l~~l~hp~------iv~l~~~~~~~~~~~lv~e~~~g---~L~~~~~~~~~~l~~~~~~~ 115 (397)
...+.+|.+ ..+.+.|-+ |.+++ +.....-.|+||||+| +-.+.+.+.+ ++...+..
T Consensus 232 ~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i~~~g--i~~~~i~~ 307 (538)
T KOG1235|consen 232 AKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAIDKRG--ISPHDILN 307 (538)
T ss_pred HhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHHHHcC--CCHHHHHH
Confidence 001112222 222223433 33443 2234457899999997 4446666655 66665554
Q ss_pred HHHHHHHHHHHhHhCCccccCCCCCcEEEcc----CCcEEEeeeccceeeCCC
Q 015948 116 YMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLARIFGSP 164 (397)
Q Consensus 116 ~~~qil~aL~~lH~~~ivHrDlkp~NILl~~----~~~~kl~DFG~a~~~~~~ 164 (397)
.+.+.. +.-+=..|++|+|=+|.||++.. ++++.+.|||+...+...
T Consensus 308 ~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 308 KLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 444432 12233568999999999999994 678999999999876443
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.48 E-value=1.2e-06 Score=78.11 Aligned_cols=138 Identities=18% Similarity=0.238 Sum_probs=78.7
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEeee---ecCCeEEEEEE
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAF---PHKGNLHLVFE 91 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~---~~~~~~~lv~e 91 (397)
++.|+.|..+.||++.... ..+++|..... .....+.+|..+++.+.... +.+++... ......+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 5789999999999997654 58999986433 22335667888888885432 44555432 33446899999
Q ss_pred ccccC-HHH-------------------HHHhcC---CCCCHHH------HHHH---------------HHHHHH-HHHH
Q 015948 92 FMETD-LET-------------------VIRNTN---IFLSPAD------IKSY---------------MQMTLK-GLAF 126 (397)
Q Consensus 92 ~~~g~-L~~-------------------~~~~~~---~~l~~~~------~~~~---------------~~qil~-aL~~ 126 (397)
+++|. +.. .+.... ..+.... .... ...+.. .++.
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE 155 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 99973 333 011110 0001000 0000 011112 2333
Q ss_pred hH-------hCCccccCCCCCcEEEc-cCCcEEEeeecccee
Q 015948 127 CH-------KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARI 160 (397)
Q Consensus 127 lH-------~~~ivHrDlkp~NILl~-~~~~~kl~DFG~a~~ 160 (397)
++ ...++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 33 24599999999999999 667678999998864
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.48 E-value=2.2e-06 Score=77.41 Aligned_cols=71 Identities=21% Similarity=0.209 Sum_probs=49.2
Q ss_pred eeeecCc-EEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCeeEEEeeeecCCeEEEEEEccccC
Q 015948 19 VLGEGTY-GVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEFMETD 96 (397)
Q Consensus 19 ~LG~G~~-g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~e~~~g~ 96 (397)
.|-.|.. +.||++.. .+..+.+|...... .....+|+.+++.+. +--+.+++++....+..++|||+++|.
T Consensus 5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 3444544 88999854 34678888764332 224567999998884 334567788777777789999999984
No 463
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.45 E-value=1.2e-06 Score=91.25 Aligned_cols=196 Identities=19% Similarity=0.261 Sum_probs=134.0
Q ss_pred HHHHHHHhcCCCCeeEEEeeeecCCe----EEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccc
Q 015948 60 REIKLLKELKSPHIIELIDAFPHKGN----LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134 (397)
Q Consensus 60 ~E~~~l~~l~hp~iv~l~~~~~~~~~----~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivH 134 (397)
.|+..+..+.|+|++.++.+.-.... +.+..++|.+ ++...+.. -..++...++.+..++++||+|+|+....|
T Consensus 231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~ 309 (1351)
T KOG1035|consen 231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLHSLSLEH 309 (1351)
T ss_pred HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHHHhccce
Confidence 47777888899999999887644332 2344577875 55555554 445899999999999999999999996655
Q ss_pred cCCCCC---cEEEccCCcEEEe--eeccceeeCCCCCcccccccCceeeChhcccCccCCC--CcchHHHHHHHHHHHHh
Q 015948 135 RDMKPN---NLLIGSHGQLKLA--DFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYG--AGVDVWAAGCIFAELLN 207 (397)
Q Consensus 135 rDlkp~---NILl~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~--~~~DiwSlG~il~ell~ 207 (397)
.-|... +-.++..+.+.+. ||+....+......... ..+..+.++|.... ..+. ...|+|++|.++..+..
T Consensus 310 v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~-~~~~~~~~~e~~~~-~~~~~~r~~dL~~lgll~~~~~~ 387 (1351)
T KOG1035|consen 310 VVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSD-LLAEIRNADEDLKE-NTAKKSRLTDLWCLGLLLLQLSQ 387 (1351)
T ss_pred eEEecccccccccCccceeecchhhhcccccCCCcccchhh-cCcccccccccccc-ccchhhhhhHHHHHHHHHhhhhh
Confidence 555444 3344455666766 88888877655544333 33344778887754 3333 33699999999999988
Q ss_pred CCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCH-HHHHHHHHhcCcCCCCCCCHH
Q 015948 208 RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASD-DALDLLSKMFTYDPKARITAQ 286 (397)
Q Consensus 208 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~li~~~L~~dP~~R~t~~ 286 (397)
|..+-.... .+ ..+.+..+. ...+++.+|+.-++++|+++.
T Consensus 388 ~~~i~~~~~------~~--------------------------------~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~ 429 (1351)
T KOG1035|consen 388 GEDISEKSA------VP--------------------------------VSLLDVLSTSELLDALPKCLDEDSEERLSAL 429 (1351)
T ss_pred cCccccccc------ch--------------------------------hhhhccccchhhhhhhhhhcchhhhhccchh
Confidence 764311110 00 011111122 678889999999999999999
Q ss_pred HHhcCCCCCC
Q 015948 287 QALEHRYFSS 296 (397)
Q Consensus 287 e~l~hp~~~~ 296 (397)
+++.|+|...
T Consensus 430 ~ll~~~f~~~ 439 (1351)
T KOG1035|consen 430 ELLTHPFLRF 439 (1351)
T ss_pred hhhhchhccc
Confidence 9999999764
No 464
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.43 E-value=2.2e-06 Score=71.46 Aligned_cols=129 Identities=19% Similarity=0.174 Sum_probs=90.4
Q ss_pred eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeEEEEEEcc
Q 015948 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLVFEFM 93 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~~lv~e~~ 93 (397)
.+.+.||+|.+|.||++.. .|..+|+|+-+... ....+..|+++|..+.--++. +++.+-++ ++.|||+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds----~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i 94 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDS----PRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYI 94 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCc----chhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhh
Confidence 4577899999999999954 56799999865433 344677899999999876664 44444332 3559999
Q ss_pred cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCC-CCcEEEccCCcEEEeeeccceee
Q 015948 94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK-PNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 94 ~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlk-p~NILl~~~~~~kl~DFG~a~~~ 161 (397)
.| .|....... + +.-+..++++.--|-..||-|+.|. |..++|..++.+-|+||..|+.-
T Consensus 95 ~G~~L~~~~~~~----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 95 DGRPLGKLEIGG----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred cCcchhhhhhcc----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 98 666554421 2 2233445566566778899999986 55555556668999999999843
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=98.40 E-value=3e-06 Score=89.79 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=56.0
Q ss_pred eeeeeeecCcEEEEEEEECCCC--cEEEEEEeecCCccCCccchHHHHHHHHHhcC-CCCe--eEEEeeeecC---CeEE
Q 015948 16 KREVLGEGTYGVVYKAIDTKTG--QTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHI--IELIDAFPHK---GNLH 87 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~-hp~i--v~l~~~~~~~---~~~~ 87 (397)
-.+.|+.|.+..+|+......+ ..+++|+........ ....+.+|+.+|+.+. |.+| .+++.++.+. +..|
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc-cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 3677899999999998765432 467778754332211 1235678999999995 6654 7777777654 4688
Q ss_pred EEEEccccC
Q 015948 88 LVFEFMETD 96 (397)
Q Consensus 88 lv~e~~~g~ 96 (397)
+||||++|.
T Consensus 121 lVME~v~G~ 129 (822)
T PLN02876 121 YIMEYLEGR 129 (822)
T ss_pred EEEEecCCc
Confidence 999999984
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.30 E-value=1.9e-05 Score=68.49 Aligned_cols=129 Identities=20% Similarity=0.338 Sum_probs=92.5
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCC--------------ccCCccchHHHHHHHHHhcC------CCCeeEE
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--------------QKEGVNFTALREIKLLKELK------SPHIIEL 76 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~--------------~~~~~~~~~~~E~~~l~~l~------hp~iv~l 76 (397)
...||+|+.-.||.- ..+....||++.... ..........+|+.-...+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 457899999999874 345677889987665 11112234456776666665 7899999
Q ss_pred EeeeecCCeEEEEEEccc---c----CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCC-
Q 015948 77 IDAFPHKGNLHLVFEFME---T----DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG- 148 (397)
Q Consensus 77 ~~~~~~~~~~~lv~e~~~---g----~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~- 148 (397)
++..+++...-+|+|.+. | +|.+++.+.. +++ ... ..+-+-.+||-+.+|+.+||+|.||++...+
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~--~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG--LTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC--ccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 999999999999999874 3 4666664432 555 333 3344556788999999999999999997543
Q ss_pred ---cEEEee
Q 015948 149 ---QLKLAD 154 (397)
Q Consensus 149 ---~~kl~D 154 (397)
.+.|+|
T Consensus 157 ~~~~lvlID 165 (199)
T PF10707_consen 157 GEFRLVLID 165 (199)
T ss_pred CceEEEEEe
Confidence 477777
No 467
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.21 E-value=1.7e-05 Score=68.24 Aligned_cols=128 Identities=26% Similarity=0.268 Sum_probs=88.0
Q ss_pred hcceeeeeeeeecCc-EEEEEEEECCCCcEEEEEEeecCC---c-------c--C-------CccchHHHHHHHHHhc--
Q 015948 11 ADRYLKREVLGEGTY-GVVYKAIDTKTGQTVAIKKIRLGK---Q-------K--E-------GVNFTALREIKLLKEL-- 68 (397)
Q Consensus 11 ~~~y~i~~~LG~G~~-g~Vy~a~~~~~~~~~aiK~i~~~~---~-------~--~-------~~~~~~~~E~~~l~~l-- 68 (397)
...++.++.||.|.- |.||+++. .|+.||+|+++.-. . . + ....-+..|.....+|
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 378999999999999 99999954 57899999943211 0 0 0 1112344566665555
Q ss_pred -CCCCe--eEEEeeeecC------------------CeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q 015948 69 -KSPHI--IELIDAFPHK------------------GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC 127 (397)
Q Consensus 69 -~hp~i--v~l~~~~~~~------------------~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l 127 (397)
.+.++ |+.+++..-. ...-||.||+...- .+.... +.+|++-+..+
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~~----~~~~~~dl~~~ 180 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIRD----IPQMLRDLKIL 180 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchhH----HHHHHHHHHHH
Confidence 45566 8888876111 12457888876443 133333 45677788899
Q ss_pred HhCCccccCCCCCcEEEccCCcEEEeeeccc
Q 015948 128 HKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 128 H~~~ivHrDlkp~NILl~~~~~~kl~DFG~a 158 (397)
|..||+-+|+++.|.. + =||+|||.+
T Consensus 181 ~k~gI~~~Dv~~~ny~---~--G~lvDfs~~ 206 (207)
T PF13095_consen 181 HKLGIVPRDVKPRNYR---G--GKLVDFSSS 206 (207)
T ss_pred HHCCeeeccCcccccc---C--CEEEecccC
Confidence 9999999999999998 3 489999865
No 468
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=98.19 E-value=1.1e-07 Score=100.91 Aligned_cols=218 Identities=13% Similarity=0.007 Sum_probs=148.1
Q ss_pred CCccchHHHHHHHHHhcCCCCeeEEEeeeec--CCeEEEEEEccc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHH
Q 015948 52 EGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHLVFEFME-TDLETVIRNTNI---FLSPADIKSYMQMTLKGLA 125 (397)
Q Consensus 52 ~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~lv~e~~~-g~L~~~~~~~~~---~l~~~~~~~~~~qil~aL~ 125 (397)
+...+....|.+.++...|+++.....-... ....|.+++||. |++...+.+... .+...-+.....+.+.+..
T Consensus 1270 ePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~ 1349 (2724)
T KOG1826|consen 1270 EPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRN 1349 (2724)
T ss_pred hHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccc
Confidence 3334445567777778899999887666543 335689999998 788888876532 2344444444555466777
Q ss_pred HhHhCC-----ccccCCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHH
Q 015948 126 FCHKKW-----VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGC 200 (397)
Q Consensus 126 ~lH~~~-----ivHrDlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~ 200 (397)
-+|+.. .+|++||+.|.+|..+.++|+.++|+.++........+..++++.|+++++... ..++.++|+|..|+
T Consensus 1350 ~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1350 VILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRRSL 1428 (2724)
T ss_pred hhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHHHH
Confidence 777542 799999999999999999999999999966666666777888889999998765 55788899999999
Q ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCC
Q 015948 201 IFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPK 280 (397)
Q Consensus 201 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 280 (397)
.+|++..|.++|... +..+.++.- ......++...-+.++-.....+|-+.-.
T Consensus 1429 ~ly~rs~~n~~fi~f-----lq~~Lkgii----------------------dn~tf~sIe~l~pgdaNve~~~~Ll~K~~ 1481 (2724)
T KOG1826|consen 1429 SLYLRSDGNAYFIFF-----LQPALKGII----------------------DNHTFFSIEKLKPGDANVEALHRLLWKYM 1481 (2724)
T ss_pred HHHHHhcccHHHHHH-----HHHHHcCcc----------------------cccccccccccCCCcccHHHHHHHHHHhh
Confidence 999999888776422 222222111 00111111111133444444445555667
Q ss_pred CCCCHHHHhcCCCCCCC
Q 015948 281 ARITAQQALEHRYFSSA 297 (397)
Q Consensus 281 ~R~t~~e~l~hp~~~~~ 297 (397)
.||.-...+.-+.|...
T Consensus 1482 ~rp~q~isls~d~~a~~ 1498 (2724)
T KOG1826|consen 1482 ERPGQYISLSRDHFAVG 1498 (2724)
T ss_pred hcchhhhhccccccccc
Confidence 88998888887777543
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.11 E-value=5e-05 Score=68.11 Aligned_cols=72 Identities=17% Similarity=0.245 Sum_probs=46.4
Q ss_pred eeeeeecCcEEEEEEEECC-CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC-eeEEEeeeecCCeEEEEEEccc
Q 015948 17 REVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
.+.|..|-...+|++.... .++.|++|+...... ......+|+.+++.+...+ ..+++..+. + .+||||++
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i~ 75 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFIP 75 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEeeC
Confidence 4677888889999996443 356888997643211 1123347999999885433 344544443 2 37999998
Q ss_pred c
Q 015948 95 T 95 (397)
Q Consensus 95 g 95 (397)
|
T Consensus 76 G 76 (235)
T cd05157 76 G 76 (235)
T ss_pred C
Confidence 7
No 470
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.09 E-value=1.3e-05 Score=72.09 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=43.0
Q ss_pred eeeeeecCcE-EEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCC---CeeEEEeeeecC---CeEEEE
Q 015948 17 REVLGEGTYG-VVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSP---HIIELIDAFPHK---GNLHLV 89 (397)
Q Consensus 17 ~~~LG~G~~g-~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~l~~~~~~~---~~~~lv 89 (397)
.+.|+.|+.. .||+. +..+++|..+.. .....+.+|.++|..+... -+.++++..... +..|++
T Consensus 2 ~~~~~~gG~~n~vy~~-----~~~~VlR~~~~~----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l 72 (235)
T cd05155 2 IEPVDSGGTDNATFRL-----GDDMSVRLPSAA----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV 72 (235)
T ss_pred ceeccCCCcccceEEc-----CCceEEEcCCcc----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence 3567777776 48976 235777864321 1233577899999888532 234444443332 245889
Q ss_pred EEcccc
Q 015948 90 FEFMET 95 (397)
Q Consensus 90 ~e~~~g 95 (397)
|++++|
T Consensus 73 ~~~i~G 78 (235)
T cd05155 73 YRWLEG 78 (235)
T ss_pred EEeecC
Confidence 999987
No 471
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.00 E-value=3.6e-05 Score=72.07 Aligned_cols=137 Identities=14% Similarity=0.102 Sum_probs=79.2
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEeee------ecCCeEEE
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAF------PHKGNLHL 88 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~------~~~~~~~l 88 (397)
.+.++.|....+|++.. . +..+++|+...... ...+..|+.++..|.... +.+++... ...+..++
T Consensus 27 i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~----~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~ 100 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVK----AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC 100 (307)
T ss_pred ccccCCccccceEEEEe-C-CCcEEEEEecCCCC----HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence 45567777789999853 2 34677897654221 123446777887774322 34443321 23466889
Q ss_pred EEEccccCH-----H----------HHHHhcCCCCCH-------HHHH----------------HHHHHHHHHHHHhH--
Q 015948 89 VFEFMETDL-----E----------TVIRNTNIFLSP-------ADIK----------------SYMQMTLKGLAFCH-- 128 (397)
Q Consensus 89 v~e~~~g~L-----~----------~~~~~~~~~l~~-------~~~~----------------~~~~qil~aL~~lH-- 128 (397)
|++|++|.. . ..++.....++. ...+ .....+...++++.
T Consensus 101 l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~ 180 (307)
T TIGR00938 101 LVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKF 180 (307)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhh
Confidence 999998721 1 111211111100 0000 01112233455553
Q ss_pred -----hCCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 129 -----KKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 129 -----~~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
..+++|+|+++.||+++.++.+.|+||+.+.
T Consensus 181 ~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 181 WPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 2689999999999999988877899999875
No 472
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.98 E-value=3.4e-05 Score=71.80 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=80.5
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEee------eecCCeEEE
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDA------FPHKGNLHL 88 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~------~~~~~~~~l 88 (397)
.+.|..|....+|+... .+..+++|+... .....+..|+.++..+.+.+ +.+++.. ....+..++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-----~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~ 91 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK-----VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAA 91 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC-----CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEE
Confidence 55677787789999853 345788898653 11224556888888884322 4444432 133456789
Q ss_pred EEEccccCHH---------------HHHHhcCCCCCH--------HHHH------------HHHHHHHHHHHHhHh----
Q 015948 89 VFEFMETDLE---------------TVIRNTNIFLSP--------ADIK------------SYMQMTLKGLAFCHK---- 129 (397)
Q Consensus 89 v~e~~~g~L~---------------~~~~~~~~~l~~--------~~~~------------~~~~qil~aL~~lH~---- 129 (397)
|++|++|... ..++.....+.. .... .....+..++.++.+
T Consensus 92 l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 171 (296)
T cd05153 92 LVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPS 171 (296)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhh
Confidence 9999987321 111111000000 0000 011112233444443
Q ss_pred ---CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 130 ---KWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 130 ---~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
.+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 172 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 172 DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred cCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4799999999999999887778999998863
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.95 E-value=0.00024 Score=68.34 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=52.6
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---c--CCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEE
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---K--EGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHL 88 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---~--~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~l 88 (397)
.+.||.|.+..||++.....++.++||.-..... . .-...+...|...|+.+. -.++.+++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 4679999999999998864446899997542211 0 112234567888888863 2456777666 3455789
Q ss_pred EEEcccc
Q 015948 89 VFEFMET 95 (397)
Q Consensus 89 v~e~~~g 95 (397)
||||+++
T Consensus 109 VME~L~~ 115 (401)
T PRK09550 109 VMEDLSD 115 (401)
T ss_pred EEecCCC
Confidence 9999985
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.88 E-value=7.9e-05 Score=67.81 Aligned_cols=133 Identities=22% Similarity=0.242 Sum_probs=76.8
Q ss_pred eeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEEEccccCH
Q 015948 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVFEFMETDL 97 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~e~~~g~L 97 (397)
.+..|-.+.+|+.. .++..+++|........ ......+|..+++.+..-.+ .+++.... -++||||++|..
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~--~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~ 74 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKA--LGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEV 74 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCccccc--ccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcc
Confidence 35667888999885 45678888875432211 11234679999999865333 33443332 258999998732
Q ss_pred HH---------------H---HHhcC---CCCCH-HHHHHHHHHH---------HHHHHHhHh--------CCccccCCC
Q 015948 98 ET---------------V---IRNTN---IFLSP-ADIKSYMQMT---------LKGLAFCHK--------KWVLHRDMK 138 (397)
Q Consensus 98 ~~---------------~---~~~~~---~~l~~-~~~~~~~~qi---------l~aL~~lH~--------~~ivHrDlk 138 (397)
.. . ++... ..++. ..+..+..++ ...+..+-. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 11 1 11111 11121 1222222222 111222211 258999999
Q ss_pred CCcEEEccCCcEEEeeecccee
Q 015948 139 PNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 139 p~NILl~~~~~~kl~DFG~a~~ 160 (397)
|.||+++.++ +.|+||+.|..
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCc
Confidence 9999999877 88999998864
No 475
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.87 E-value=7e-05 Score=69.61 Aligned_cols=145 Identities=23% Similarity=0.259 Sum_probs=97.9
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc----cCC--------------------ccchHHHHHHHHHhcCCC
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ----KEG--------------------VNFTALREIKLLKELKSP 71 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~----~~~--------------------~~~~~~~E~~~l~~l~hp 71 (397)
|...|..|.-+.||.|.. ..|..+|||+.+-+-. .+. ....+..|+.-|++|..-
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 345577899999999974 4678899998753310 000 011233577778887654
Q ss_pred CeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCcEEEccCCcE
Q 015948 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNLLIGSHGQL 150 (397)
Q Consensus 72 ~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~l-H~~~ivHrDlkp~NILl~~~~~~ 150 (397)
.|.-.--+. =....|||+|++++-+..-+-.+..++...+..+-.+++.-+.-| |.+++||.||.=-|+|+ .+|.+
T Consensus 227 GIP~PePIl--Lk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~l 303 (520)
T KOG2270|consen 227 GIPCPEPIL--LKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGKL 303 (520)
T ss_pred CCCCCCcee--eecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCEE
Confidence 432111011 023469999999654443333455688888998888888888877 56789999999999999 46779
Q ss_pred EEeeeccceeeCCC
Q 015948 151 KLADFGLARIFGSP 164 (397)
Q Consensus 151 kl~DFG~a~~~~~~ 164 (397)
.|+|.+-+.....+
T Consensus 304 yiIDVSQSVE~DHP 317 (520)
T KOG2270|consen 304 YIIDVSQSVEHDHP 317 (520)
T ss_pred EEEEccccccCCCh
Confidence 99999887665443
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.82 E-value=5.9e-05 Score=65.09 Aligned_cols=98 Identities=19% Similarity=0.199 Sum_probs=77.6
Q ss_pred HHHHHHHhcCC-CCeeEEEeeeecCCeEEEEEEccc-cCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHhHh---CCc
Q 015948 60 REIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFME-TDLETVIR--NTNIFLSPADIKSYMQMTLKGLAFCHK---KWV 132 (397)
Q Consensus 60 ~E~~~l~~l~h-p~iv~l~~~~~~~~~~~lv~e~~~-g~L~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH~---~~i 132 (397)
.|.-+|+.+.+ +++.++++++.+ ++|.||.+ +.+..... ..-...++.....++.++++.+.+++. ..+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 58889999987 799999999933 46899998 45532100 011125788899999999999999987 458
Q ss_pred cccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 133 vHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
.-.|++|+|+-|+++|++|++|...+...
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhcchh
Confidence 88999999999999999999999887544
No 477
>PRK05231 homoserine kinase; Provisional
Probab=97.82 E-value=0.00025 Score=66.73 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=26.5
Q ss_pred CCccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
.|++|+|+.|.|||++.+...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 4899999999999998665568999998863
No 478
>PRK10593 hypothetical protein; Provisional
Probab=97.78 E-value=0.00037 Score=64.85 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=53.3
Q ss_pred ceeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC---CCeeEEEeeeec---CCeE
Q 015948 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIELIDAFPH---KGNL 86 (397)
Q Consensus 13 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~l~~~~~~---~~~~ 86 (397)
.-.-.+.||.|..+.||..... ++ .+.+|..+ .. .....+..|...|+.|.. -.+.++++.+.. .+..
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~-~~---~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~ 88 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDS-QG-NPMPLMAR-SF---STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPD 88 (297)
T ss_pred hhheeeecCCccceeEEEEEcC-CC-CEEEEEec-cc---ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCe
Confidence 3444678999999999998533 23 46677642 21 112356789999998853 357778876644 4678
Q ss_pred EEEEEcccc
Q 015948 87 HLVFEFMET 95 (397)
Q Consensus 87 ~lv~e~~~g 95 (397)
++|||+++|
T Consensus 89 ~LVmE~i~G 97 (297)
T PRK10593 89 VLLLERLRG 97 (297)
T ss_pred EEEEeccCC
Confidence 999999986
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.69 E-value=0.00033 Score=65.41 Aligned_cols=72 Identities=18% Similarity=0.272 Sum_probs=45.8
Q ss_pred eeeeeecCcEEEEEEEECC------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEE
Q 015948 17 REVLGEGTYGVVYKAIDTK------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLV 89 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv 89 (397)
.+.|..|-...||++.... .++.|++|+...... ......+|+.+++.+....+ .+++.++. + .+|
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v 75 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE---LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRI 75 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc---ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cch
Confidence 3556677778999986533 257899998654321 12245679989988864333 34555553 2 257
Q ss_pred EEcccc
Q 015948 90 FEFMET 95 (397)
Q Consensus 90 ~e~~~g 95 (397)
+||++|
T Consensus 76 ~e~i~G 81 (302)
T cd05156 76 EEFIPS 81 (302)
T ss_pred hheeCC
Confidence 899887
No 480
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.64 E-value=3e-05 Score=70.87 Aligned_cols=140 Identities=20% Similarity=0.294 Sum_probs=96.5
Q ss_pred eeeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc---------------cCCc-----cchHHHHHHHHHhcCC--C
Q 015948 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---------------KEGV-----NFTALREIKLLKELKS--P 71 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~---------------~~~~-----~~~~~~E~~~l~~l~h--p 71 (397)
|.+.+.||-|.-+.||.+-+. .|..+++|.-+.... .... ...+.+|...|+.|.. =
T Consensus 94 ~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 567889999999999999764 678899886543221 0000 1124578888888843 2
Q ss_pred CeeEEEeeeecCCeEEEEEEcccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcEEEccCCcE
Q 015948 72 HIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (397)
Q Consensus 72 ~iv~l~~~~~~~~~~~lv~e~~~g-~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHrDlkp~NILl~~~~~~ 150 (397)
-|.+.+|+ ...++|||++.| .|.+.-.- ..+..+...+..-+.-|-.+|+||+|..==||+|.+++.+
T Consensus 173 pVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v-------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i 241 (465)
T KOG2268|consen 173 PVPKPIDH----NRHCVVMELVDGYPLRQVRHV-------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKI 241 (465)
T ss_pred CCCCcccc----cceeeHHHhhcccceeeeeec-------CChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCE
Confidence 24444443 456789999987 44433221 2234455666667778889999999999999999999999
Q ss_pred EEeeeccceeeCCCC
Q 015948 151 KLADFGLARIFGSPD 165 (397)
Q Consensus 151 kl~DFG~a~~~~~~~ 165 (397)
+++||--......+.
T Consensus 242 ~vIDFPQmvS~sh~n 256 (465)
T KOG2268|consen 242 VVIDFPQMVSTSHPN 256 (465)
T ss_pred EEeechHhhccCCCc
Confidence 999997665444433
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.61 E-value=0.00099 Score=62.83 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=51.9
Q ss_pred eeeecCcEEEEEEEECCCCcEEEEEEeecCC-----ccCCccchHHHHHHHHHhcCC--CC-eeEEEeeeecCCeEEEEE
Q 015948 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-----QKEGVNFTALREIKLLKELKS--PH-IIELIDAFPHKGNLHLVF 90 (397)
Q Consensus 19 ~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~E~~~l~~l~h--p~-iv~l~~~~~~~~~~~lv~ 90 (397)
.||.|...-||++.+...++.++||.-.... ...-...+...|...|+...- |. +.+++ +| +.....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy-~~-D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF-HF-DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE-EE-ccccceehH
Confidence 5799999999999976444689999653211 112223355678888887742 53 44454 33 555667899
Q ss_pred Ecccc--CHHHHHH
Q 015948 91 EFMET--DLETVIR 102 (397)
Q Consensus 91 e~~~g--~L~~~~~ 102 (397)
|+++. .+...+.
T Consensus 80 EdL~~~~ilR~~Li 93 (370)
T TIGR01767 80 EDLSHHKIARKGLI 93 (370)
T ss_pred hhCccchHHHHHHH
Confidence 99973 3444443
No 482
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.55 E-value=0.00017 Score=69.74 Aligned_cols=172 Identities=21% Similarity=0.279 Sum_probs=109.4
Q ss_pred hHHHHHHHHHhcCCCCeeEEEeeeec-CCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhCCcccc
Q 015948 57 TALREIKLLKELKSPHIIELIDAFPH-KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135 (397)
Q Consensus 57 ~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ivHr 135 (397)
.++-...+++.+.|+|....+++-.. .....+|+|+++-+|.+..+.++ +-... ++ .+|+.|-
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s-------~~-------~~~~~~~ 91 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDES-------LL-------AHGVLHL 91 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhh-------hc-------cccccee
Confidence 45567889999999999999887643 33588999999999999887654 21111 11 2222222
Q ss_pred CCCCCcEEEccCCcEEEeeeccceeeCCCCCcccccccCceeeChhcccCccCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 015948 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS 215 (397)
Q Consensus 136 Dlkp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 215 (397)
| .++++| -++.. | |- ..++++||||+|.++.++.-|...+..-
T Consensus 92 -----~-------~~~~td-~~~t~----------------~--~~------~~~pKsdVwsl~~i~~el~L~~~l~~~~ 134 (725)
T KOG1093|consen 92 -----N-------IIYITD-HFLTK----------------Y--PS------PIGPKSDVWSLGFIILELYLGISLEAEL 134 (725)
T ss_pred -----h-------hhhccc-ccccc----------------C--CC------CCCcchhhhhHHHHHHHHHHhhHHHHHH
Confidence 1 133344 11100 1 11 1225999999999999999998888777
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCCCCCCccccccccccCCCccccCCCCCHHHHHHHHHhcCcCCCCCCCHHHHhcCCCCC
Q 015948 216 SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFS 295 (397)
Q Consensus 216 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 295 (397)
...+.+..+.+.+-...... .. .. ...+.-.++....+++.+|+...|..||...++.+++-|.
T Consensus 135 ~~s~~l~~i~k~~~~d~~~~------~~--a~--------e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ 198 (725)
T KOG1093|consen 135 TESEYLEILLKYYTDDQELL------ST--AM--------EHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFT 198 (725)
T ss_pred HHHHHHHHHHHhccCchhHH------HH--HH--------HHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHH
Confidence 77777666655422110000 00 00 0011112356678899999999999999999999999887
Q ss_pred CC
Q 015948 296 SA 297 (397)
Q Consensus 296 ~~ 297 (397)
.+
T Consensus 199 ev 200 (725)
T KOG1093|consen 199 EV 200 (725)
T ss_pred HH
Confidence 54
No 483
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.48 E-value=0.00086 Score=64.01 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=53.8
Q ss_pred eeeeeecCcEEEEEEEECCCCcEEEEEEeecCC----ccCCccchHHHHHHHHHhcCC--C-CeeEEEeeeecCCeEEEE
Q 015948 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK----QKEGVNFTALREIKLLKELKS--P-HIIELIDAFPHKGNLHLV 89 (397)
Q Consensus 17 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~----~~~~~~~~~~~E~~~l~~l~h--p-~iv~l~~~~~~~~~~~lv 89 (397)
.+.||.|.-.-||++.+...++-++||.-.... ...-...+...|..+|+.+.- | ++.+++. | +.....+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~-~-D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL-F-DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE-E-CcHHhhHH
Confidence 668899999999999885445679998643221 112223455668899888742 5 4445543 3 55666788
Q ss_pred EEcccc--CHHHHHH
Q 015948 90 FEFMET--DLETVIR 102 (397)
Q Consensus 90 ~e~~~g--~L~~~~~ 102 (397)
||+++. .|...+.
T Consensus 112 MEdL~~~~ilR~~Li 126 (409)
T PRK12396 112 MEDLSDHTILRTALI 126 (409)
T ss_pred HHhCcccHHHHHHHH
Confidence 999963 3444433
No 484
>PLN02236 choline kinase
Probab=97.35 E-value=0.0026 Score=60.49 Aligned_cols=140 Identities=17% Similarity=0.217 Sum_probs=80.7
Q ss_pred eeeeeeeeecCcEEEEEEEECC----CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeEEE
Q 015948 14 YLKREVLGEGTYGVVYKAIDTK----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHL 88 (397)
Q Consensus 14 y~i~~~LG~G~~g~Vy~a~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~~l 88 (397)
..-...|-.|-...+|++.... .++.|++|+..... + ......+|..+++.+..-++. ++++.+..+ .
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~-~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~ 110 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--E-LFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----R 110 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--C-eeechHHHHHHHHHHHHcCCCCceEEEECCc----e
Confidence 3334556568888999986432 34689999765432 1 222335799999998654443 455666433 5
Q ss_pred EEEccccCHHH-----------H-------HHhcCCC-----CCHHHHHHHHHHHH--------------------HHHH
Q 015948 89 VFEFMETDLET-----------V-------IRNTNIF-----LSPADIKSYMQMTL--------------------KGLA 125 (397)
Q Consensus 89 v~e~~~g~L~~-----------~-------~~~~~~~-----l~~~~~~~~~~qil--------------------~aL~ 125 (397)
|.+|++|..+. . ++....+ .....+..+..++. ..|.
T Consensus 111 v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~ 190 (344)
T PLN02236 111 VEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLE 190 (344)
T ss_pred EEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHH
Confidence 78898762211 0 1111111 11122333332211 1111
Q ss_pred H-h----HhCCccccCCCCCcEEEcc-CCcEEEeeecccee
Q 015948 126 F-C----HKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARI 160 (397)
Q Consensus 126 ~-l----H~~~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~ 160 (397)
. + +...++|+|+++.|||++. ++.+.|+||..|..
T Consensus 191 ~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 191 KELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1 1 1235899999999999986 47899999988863
No 485
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.32 E-value=0.0025 Score=60.26 Aligned_cols=139 Identities=18% Similarity=0.270 Sum_probs=79.5
Q ss_pred eeeeeeeecCcEEEEEEEECCC---CcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEE
Q 015948 15 LKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVF 90 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~ 90 (397)
...+.|..|-...+|++..... +..|++|+...... ......+|..+++.+..-++ .++++++. ++ +|.
T Consensus 17 i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~---~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~ 89 (330)
T PLN02421 17 FSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD---YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQ 89 (330)
T ss_pred eEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC---eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---Eee
Confidence 3455566688888999865432 34788997654321 22233579999999976555 35565563 33 588
Q ss_pred EccccCHHH------------------HHHhcCCC----C-CHHHHHHHHHHH-------------------------HH
Q 015948 91 EFMETDLET------------------VIRNTNIF----L-SPADIKSYMQMT-------------------------LK 122 (397)
Q Consensus 91 e~~~g~L~~------------------~~~~~~~~----l-~~~~~~~~~~qi-------------------------l~ 122 (397)
+|++|..+. .++....+ . -...+..|..++ +.
T Consensus 90 ~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 169 (330)
T PLN02421 90 SFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIV 169 (330)
T ss_pred hhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHH
Confidence 888763211 11111111 1 112222232221 11
Q ss_pred HHHHh-HhC----CccccCCCCCcEEEcc-CCcEEEeeecccee
Q 015948 123 GLAFC-HKK----WVLHRDMKPNNLLIGS-HGQLKLADFGLARI 160 (397)
Q Consensus 123 aL~~l-H~~----~ivHrDlkp~NILl~~-~~~~kl~DFG~a~~ 160 (397)
.+..+ ... -++|+|+.+.|||++. ++.++++||+.|..
T Consensus 170 ~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 170 ELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred HHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 11111 122 2899999999999975 47899999998853
No 486
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.29 E-value=0.003 Score=59.14 Aligned_cols=29 Identities=21% Similarity=0.400 Sum_probs=25.8
Q ss_pred CCccccCCCCCcEEEccCCcEEEeeeccce
Q 015948 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (397)
Q Consensus 130 ~~ivHrDlkp~NILl~~~~~~kl~DFG~a~ 159 (397)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 57999999999999987 678999999775
No 487
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.16 E-value=0.0022 Score=58.93 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=25.7
Q ss_pred CccccCCCCCcEEEccCCc-EEEeeecccee
Q 015948 131 WVLHRDMKPNNLLIGSHGQ-LKLADFGLARI 160 (397)
Q Consensus 131 ~ivHrDlkp~NILl~~~~~-~kl~DFG~a~~ 160 (397)
.++|+|++|.|||++.++. +-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999987565 46999999875
No 488
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.15 E-value=0.0043 Score=57.76 Aligned_cols=144 Identities=16% Similarity=0.182 Sum_probs=78.8
Q ss_pred eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCC--CCeeEEEeeeecCC--eEEEEE
Q 015948 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHKG--NLHLVF 90 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~~~~~~~--~~~lv~ 90 (397)
.+.+.+-.|.--.+|...+. ++.+++. ...............+|..+++.+.- --+...+..+.++. ..|.||
T Consensus 28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~ 104 (321)
T COG3173 28 LIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVM 104 (321)
T ss_pred ceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEE
Confidence 44555534433444555433 7888888 33212222223345578888888743 22333455554444 679999
Q ss_pred EccccC----------HH-HHHH-----------hc---CC-------CCCHHHHHHHHHHH--------------HHHH
Q 015948 91 EFMETD----------LE-TVIR-----------NT---NI-------FLSPADIKSYMQMT--------------LKGL 124 (397)
Q Consensus 91 e~~~g~----------L~-~~~~-----------~~---~~-------~l~~~~~~~~~~qi--------------l~aL 124 (397)
+|++|. .. .... +- +. .....++..+..+. ..-.
T Consensus 105 ~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~ 184 (321)
T COG3173 105 EWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLI 184 (321)
T ss_pred EEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHH
Confidence 999881 11 1111 00 00 00111122222221 1223
Q ss_pred HHhHh--------CCccccCCCCCcEEEccCCcEEEeeeccceee
Q 015948 125 AFCHK--------KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (397)
Q Consensus 125 ~~lH~--------~~ivHrDlkp~NILl~~~~~~kl~DFG~a~~~ 161 (397)
.+++. ..++|+|+++.||+|+.++-+=|.||+++...
T Consensus 185 ~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 185 KWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 33332 24999999999999999988999999999753
No 489
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=97.08 E-value=0.0079 Score=56.32 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=27.8
Q ss_pred CccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 131 ~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
+++|+|+.+.|||++.++.+-|+||..++.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998864
No 490
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.03 E-value=0.014 Score=56.14 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=51.8
Q ss_pred eeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCc-c----CCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEE
Q 015948 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-K----EGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLH 87 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~----~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~ 87 (397)
..+.||.|....||+..+. +..|+||.-..... . .-...+...|...|+.+. -.++.+++.+.+ +..+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 4678899999999999763 45688997652221 1 112344556788887764 247778887775 4467
Q ss_pred EEEEcccc
Q 015948 88 LVFEFMET 95 (397)
Q Consensus 88 lv~e~~~g 95 (397)
++|||+++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88999976
No 491
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.79 E-value=0.0045 Score=57.88 Aligned_cols=74 Identities=26% Similarity=0.305 Sum_probs=58.2
Q ss_pred cCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCcEEEccCCcEEEeeecccee
Q 015948 82 HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (397)
Q Consensus 82 ~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~-~ivHrDlkp~NILl~~~~~~kl~DFG~a~~ 160 (397)
...+.|++|++-++.+...-. -..+++..++++.+..++-+..+ ..-|||+.-.||||+ +|+|.|+||-+++.
T Consensus 297 e~~y~yl~~kdhgt~is~ik~-----~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 297 ETLYLYLHFKDHGTPISIIKA-----DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred CceEEEEEEecCCceeeeeec-----ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 345778889988876653322 34577788888888777777666 489999999999999 99999999999985
Q ss_pred e
Q 015948 161 F 161 (397)
Q Consensus 161 ~ 161 (397)
-
T Consensus 371 ~ 371 (488)
T COG5072 371 S 371 (488)
T ss_pred c
Confidence 3
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.70 E-value=0.027 Score=51.99 Aligned_cols=73 Identities=21% Similarity=0.165 Sum_probs=47.4
Q ss_pred eeeeeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEEEEE
Q 015948 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLVFE 91 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv~e 91 (397)
+-.+.++.|....+|... .+++.|.||+-. ......+..|..-|+.|. --.+.+++.+...++.-|||||
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-----~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle 92 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-----ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLE 92 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-----GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecC-----hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEE
Confidence 345678889999999985 677889999865 222335677999898883 2456788888777777799999
Q ss_pred ccc
Q 015948 92 FME 94 (397)
Q Consensus 92 ~~~ 94 (397)
|++
T Consensus 93 ~l~ 95 (288)
T PF03881_consen 93 FLE 95 (288)
T ss_dssp ---
T ss_pred eec
Confidence 987
No 493
>PTZ00384 choline kinase; Provisional
Probab=96.66 E-value=0.02 Score=55.10 Aligned_cols=78 Identities=15% Similarity=0.191 Sum_probs=45.4
Q ss_pred eeeeeeeecCcEEEEEEEECCC-CcEEEEEE-eec-CCccCCccchHHHHHHHHHhcCCCCe-eEEEeeeecCCeEEEEE
Q 015948 15 LKREVLGEGTYGVVYKAIDTKT-GQTVAIKK-IRL-GKQKEGVNFTALREIKLLKELKSPHI-IELIDAFPHKGNLHLVF 90 (397)
Q Consensus 15 ~i~~~LG~G~~g~Vy~a~~~~~-~~~~aiK~-i~~-~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lv~ 90 (397)
...+.|..|-...+|++..... +..+.+|. +.. ............+|+.+++.+...++ .++++.|.. ++|.
T Consensus 53 i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~ 128 (383)
T PTZ00384 53 IEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQ 128 (383)
T ss_pred EEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEE
Confidence 3455666688899999965432 22333332 111 11222222234579999999976555 456666643 4899
Q ss_pred EccccC
Q 015948 91 EFMETD 96 (397)
Q Consensus 91 e~~~g~ 96 (397)
||++|.
T Consensus 129 efIeGr 134 (383)
T PTZ00384 129 EWVEGN 134 (383)
T ss_pred EEeccc
Confidence 999873
No 494
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.53 E-value=0.0057 Score=53.83 Aligned_cols=30 Identities=40% Similarity=0.691 Sum_probs=21.6
Q ss_pred CccccCCCCCcEEE-ccCCcEEEeeecccee
Q 015948 131 WVLHRDMKPNNLLI-GSHGQLKLADFGLARI 160 (397)
Q Consensus 131 ~ivHrDlkp~NILl-~~~~~~kl~DFG~a~~ 160 (397)
.++|+||.|.|||+ +.++.++|+||..|..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 59999999999999 8889999999998864
No 495
>PRK06148 hypothetical protein; Provisional
Probab=96.42 E-value=0.032 Score=60.72 Aligned_cols=31 Identities=32% Similarity=0.513 Sum_probs=26.6
Q ss_pred CCccccCCCCCcEEEccCC--cEE-Eeeecccee
Q 015948 130 KWVLHRDMKPNNLLIGSHG--QLK-LADFGLARI 160 (397)
Q Consensus 130 ~~ivHrDlkp~NILl~~~~--~~k-l~DFG~a~~ 160 (397)
+++||+|+.+.|||++.++ ++. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 5799999999999999875 555 999998864
No 496
>PTZ00296 choline kinase; Provisional
Probab=96.21 E-value=0.064 Score=52.72 Aligned_cols=74 Identities=12% Similarity=0.221 Sum_probs=46.2
Q ss_pred eeeeeeecCcEEEEEEEECC--------CCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCCee-EEEeeeecCCeE
Q 015948 16 KREVLGEGTYGVVYKAIDTK--------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNL 86 (397)
Q Consensus 16 i~~~LG~G~~g~Vy~a~~~~--------~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~l~~~~~~~~~~ 86 (397)
-.+.|..|-.-.+|++.... .++.|.+++..... +. .....+|..+++.+..-+|- ++++.|. +
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t--e~-lIdR~~E~~v~~~ls~~gi~P~l~~~f~-g--- 181 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV--DE-LYNPISEFEVYKTMSKYRIAPQLLNTFS-G--- 181 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc--cc-eeCHHHHHHHHHHHHHCCCCCceEEEeC-C---
Confidence 46667777778899986442 14678888764322 11 12345688888888655553 4556653 2
Q ss_pred EEEEEccccC
Q 015948 87 HLVFEFMETD 96 (397)
Q Consensus 87 ~lv~e~~~g~ 96 (397)
+.|.||++|.
T Consensus 182 g~I~efi~g~ 191 (442)
T PTZ00296 182 GRIEEWLYGD 191 (442)
T ss_pred CEEEEeeCCc
Confidence 2578888864
No 497
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.10 E-value=0.024 Score=49.55 Aligned_cols=84 Identities=19% Similarity=0.282 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCCCeeEEEeeeecCCeEEEEEEccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhHh--CCcccc
Q 015948 58 ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK--KWVLHR 135 (397)
Q Consensus 58 ~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~e~~~g~L~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~--~~ivHr 135 (397)
+..+..++.++. .|+++..= +.-.+-++.|+|-.- .... ..++..-+.+|.-.|+ .+.+|+
T Consensus 105 y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~------------~i~~-~N~i~agi~~L~~fH~~~~~~lHG 167 (308)
T PF07387_consen 105 YFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKI------------KINF-SNFITAGIKDLMDFHSENQHCLHG 167 (308)
T ss_pred hhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCc------------ccch-hHHHHHhHHHHHHhhccCCCeecC
Confidence 456888888875 68887622 344567899998521 0001 1122222567888894 369999
Q ss_pred CCCCCcEEEccCCcEEEeeeccc
Q 015948 136 DMKPNNLLIGSHGQLKLADFGLA 158 (397)
Q Consensus 136 Dlkp~NILl~~~~~~kl~DFG~a 158 (397)
|-.|+||+-+..|.+||.|=+..
T Consensus 168 D~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 168 DCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred CCChhheeecCCCCEEecChhhh
Confidence 99999999999999999997643
No 498
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.97 E-value=0.12 Score=48.74 Aligned_cols=69 Identities=20% Similarity=0.192 Sum_probs=40.7
Q ss_pred CcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcCCCC--eeEEEe-----eeecCCeEEEEEEccccC
Q 015948 24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELID-----AFPHKGNLHLVFEFMETD 96 (397)
Q Consensus 24 ~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~-----~~~~~~~~~lv~e~~~g~ 96 (397)
.-..||+... .++..|++|+.+... .....+..|+..+..|.... ++.... ....++..+.|+++++|.
T Consensus 37 ~eN~vy~v~~-~~~~~~vlKv~r~~~---~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~ 112 (325)
T PRK11768 37 YENRVYQFGD-EDGRRVVAKFYRPER---WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGR 112 (325)
T ss_pred ccceEEEEec-CCCCEEEEEEcCccc---CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCC
Confidence 4467898853 346679999875332 12334557888887774211 222111 123356788899998873
No 499
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=95.20 E-value=0.017 Score=53.65 Aligned_cols=74 Identities=19% Similarity=0.278 Sum_probs=43.8
Q ss_pred EEEEEccccCHH---HH-HHhcCCCCCHHHHHHHHHHHHHHHHHhH------hCCccccCCCCCcEEEccCC--------
Q 015948 87 HLVFEFMETDLE---TV-IRNTNIFLSPADIKSYMQMTLKGLAFCH------KKWVLHRDMKPNNLLIGSHG-------- 148 (397)
Q Consensus 87 ~lv~e~~~g~L~---~~-~~~~~~~l~~~~~~~~~~qil~aL~~lH------~~~ivHrDlkp~NILl~~~~-------- 148 (397)
.+|+..+.++-. .. ..+.+...-.+-++.++.|| ||-|+. -.+.+|-||||+||||-+..
T Consensus 247 IIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQi--aLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~ 324 (434)
T PF05445_consen 247 IIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQI--ALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFG 324 (434)
T ss_pred EEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHH--HHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEEC
Confidence 477887764321 11 12222222233456667776 455522 34699999999999995432
Q ss_pred ----------cEEEeeeccceeeC
Q 015948 149 ----------QLKLADFGLARIFG 162 (397)
Q Consensus 149 ----------~~kl~DFG~a~~~~ 162 (397)
.++|.||.+++..+
T Consensus 325 ~~~~vF~Epi~~~LnDFDfSqv~~ 348 (434)
T PF05445_consen 325 NRNYVFKEPIRCCLNDFDFSQVAN 348 (434)
T ss_pred CeEEEecccceeeecccCHHHhcc
Confidence 36788888877643
No 500
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.14 E-value=0.13 Score=45.24 Aligned_cols=70 Identities=16% Similarity=0.133 Sum_probs=46.8
Q ss_pred eeeeecCcEEEEEEEECCCCcEEEEEEeecCCccCCccchHHHHHHHHHhcC---CCCeeEEEeeeecCCeEEEEEEccc
Q 015948 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLVFEFME 94 (397)
Q Consensus 18 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv~e~~~ 94 (397)
+.+--|.--..|...+ ....|.+|+= .......+..|+.-|+.|. .-.+.+++.+..+.++.|+||||++
T Consensus 22 ~~v~gG~inea~~v~d--g~~~~FvK~n-----~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~ 94 (286)
T COG3001 22 EEVSGGDINEAWRLRD--GTDPFFVKCN-----QREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLP 94 (286)
T ss_pred cccCCccccceeEeec--CCcceEEEec-----chhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeecc
Confidence 3454455455555532 3357888872 2333345667887777774 3557788888899999999999997
Done!