Query 015949
Match_columns 397
No_of_seqs 237 out of 1551
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 05:19:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oi8_A Uncharacterized protein 99.8 8.1E-21 2.8E-25 166.4 10.4 136 164-305 2-152 (156)
2 3lhh_A CBS domain protein; str 99.8 4.4E-20 1.5E-24 164.4 5.9 138 162-305 4-156 (172)
3 3ocm_A Putative membrane prote 99.7 1.3E-17 4.6E-22 149.2 6.9 122 181-305 13-149 (173)
4 3lv9_A Putative transporter; C 99.7 9.2E-18 3.2E-22 144.9 5.3 121 183-305 2-137 (148)
5 3oco_A Hemolysin-like protein 99.6 4.6E-16 1.6E-20 135.3 2.4 117 187-305 3-135 (153)
6 3jtf_A Magnesium and cobalt ef 99.5 1.3E-14 4.3E-19 122.5 7.8 103 201-305 2-118 (129)
7 2qrd_G Protein C1556.08C; AMPK 99.5 2.1E-14 7.3E-19 139.5 7.7 120 185-305 2-164 (334)
8 3lfr_A Putative metal ION tran 99.5 4.1E-14 1.4E-18 120.6 7.0 102 202-305 1-119 (136)
9 3hf7_A Uncharacterized CBS-dom 99.5 2E-14 6.7E-19 121.8 4.6 101 203-305 1-119 (130)
10 3kxr_A Magnesium transporter, 99.5 2.7E-13 9.1E-18 124.7 12.0 126 165-305 25-166 (205)
11 3k6e_A CBS domain protein; str 99.5 2.2E-14 7.6E-19 126.1 3.7 110 193-305 3-134 (156)
12 3i8n_A Uncharacterized protein 99.5 2.5E-14 8.5E-19 120.7 3.7 104 200-305 2-121 (130)
13 3nqr_A Magnesium and cobalt ef 99.4 1.2E-13 4.2E-18 115.9 6.8 102 202-305 1-118 (127)
14 3t4n_C Nuclear protein SNF4; C 99.4 8.4E-14 2.9E-18 134.7 4.9 123 182-305 7-169 (323)
15 2yvy_A MGTE, Mg2+ transporter 99.4 9E-13 3.1E-17 126.2 8.4 116 185-305 116-249 (278)
16 2zy9_A Mg2+ transporter MGTE; 99.4 1.2E-12 4.3E-17 134.9 9.9 133 164-305 110-269 (473)
17 2v8q_E 5'-AMP-activated protei 99.4 1E-13 3.5E-18 134.7 1.6 121 182-305 15-169 (330)
18 3ddj_A CBS domain-containing p 99.3 1.3E-12 4.6E-17 124.7 5.4 128 164-305 64-206 (296)
19 3kh5_A Protein MJ1225; AMPK, A 99.2 1.5E-11 5.3E-16 115.5 5.9 131 164-305 51-197 (280)
20 4esy_A CBS domain containing m 99.2 4.7E-11 1.6E-15 105.3 7.9 110 190-305 6-154 (170)
21 4gqw_A CBS domain-containing p 99.2 2.2E-11 7.6E-16 103.9 5.5 103 202-305 3-135 (152)
22 2emq_A Hypothetical conserved 99.2 3E-11 1E-15 104.3 6.2 108 195-305 2-131 (157)
23 2oux_A Magnesium transporter; 99.1 9.1E-11 3.1E-15 113.0 9.2 116 185-305 118-251 (286)
24 3ctu_A CBS domain protein; str 99.1 1.7E-11 5.9E-16 106.0 3.3 108 195-305 6-134 (156)
25 3lqn_A CBS domain protein; csg 99.1 3.3E-11 1.1E-15 103.4 4.0 105 198-305 9-135 (150)
26 3kh5_A Protein MJ1225; AMPK, A 99.1 1.8E-10 6E-15 108.2 9.0 98 205-305 4-134 (280)
27 3kpb_A Uncharacterized protein 99.1 5.2E-11 1.8E-15 98.3 4.3 99 204-305 1-112 (122)
28 2ef7_A Hypothetical protein ST 99.1 9.7E-11 3.3E-15 98.3 5.8 102 201-305 1-117 (133)
29 3sl7_A CBS domain-containing p 99.1 6.6E-11 2.3E-15 104.1 4.2 102 203-305 3-148 (180)
30 4fxs_A Inosine-5'-monophosphat 99.0 3.7E-11 1.3E-15 124.6 1.8 130 163-305 52-201 (496)
31 2yzi_A Hypothetical protein PH 99.0 3.4E-10 1.2E-14 95.5 7.1 103 199-305 2-121 (138)
32 3org_A CMCLC; transporter, tra 99.0 1.7E-10 5.8E-15 122.9 6.3 102 202-305 451-617 (632)
33 3k2v_A Putative D-arabinose 5- 99.0 1.1E-10 3.6E-15 100.6 3.7 100 204-305 28-144 (149)
34 3gby_A Uncharacterized protein 99.0 3.2E-10 1.1E-14 94.9 5.5 101 202-305 3-118 (128)
35 3fhm_A Uncharacterized protein 99.0 2E-10 6.9E-15 100.6 4.3 107 197-305 17-142 (165)
36 1pvm_A Conserved hypothetical 99.0 5.4E-10 1.9E-14 99.7 6.8 99 204-305 9-125 (184)
37 1yav_A Hypothetical protein BS 99.0 2E-10 6.7E-15 99.8 3.6 103 200-305 10-134 (159)
38 2rc3_A CBS domain; in SITU pro 99.0 3.4E-10 1.1E-14 95.3 4.7 99 205-305 7-123 (135)
39 2rih_A Conserved protein with 99.0 7.4E-10 2.5E-14 94.0 6.8 98 204-305 5-120 (141)
40 3ddj_A CBS domain-containing p 98.9 4.4E-10 1.5E-14 107.1 5.3 103 200-305 16-143 (296)
41 1zfj_A Inosine monophosphate d 98.9 9.3E-10 3.2E-14 113.6 7.7 129 164-305 54-203 (491)
42 4fry_A Putative signal-transdu 98.9 4.6E-10 1.6E-14 97.1 4.3 100 204-305 7-127 (157)
43 2p9m_A Hypothetical protein MJ 98.9 7.8E-10 2.7E-14 93.1 5.2 102 201-305 5-128 (138)
44 3fv6_A YQZB protein; CBS domai 98.9 1.2E-09 4E-14 95.1 6.1 101 201-305 14-136 (159)
45 2yzq_A Putative uncharacterize 98.9 3.3E-09 1.1E-13 99.9 9.4 101 202-305 58-176 (282)
46 2cu0_A Inosine-5'-monophosphat 98.9 2.9E-10 9.9E-15 117.5 2.2 127 164-305 57-200 (486)
47 2yzq_A Putative uncharacterize 98.9 9.1E-10 3.1E-14 103.7 5.0 96 205-305 2-110 (282)
48 1o50_A CBS domain-containing p 98.9 1.7E-09 5.8E-14 93.7 5.8 102 200-305 12-145 (157)
49 1y5h_A Hypothetical protein RV 98.9 9E-10 3.1E-14 92.3 3.8 101 201-305 5-123 (133)
50 1pbj_A Hypothetical protein; s 98.9 8.1E-10 2.8E-14 91.3 3.4 97 205-305 2-114 (125)
51 3usb_A Inosine-5'-monophosphat 98.9 2E-09 6.9E-14 112.0 6.7 130 163-305 76-226 (511)
52 2o16_A Acetoin utilization pro 98.9 1.3E-09 4.6E-14 94.9 4.5 100 202-305 3-127 (160)
53 2j9l_A Chloride channel protei 98.8 1.2E-09 4.3E-14 96.5 4.0 103 201-305 8-157 (185)
54 1me8_A Inosine-5'-monophosphat 98.8 1E-09 3.6E-14 113.9 2.2 130 163-305 60-213 (503)
55 4avf_A Inosine-5'-monophosphat 98.8 9.4E-10 3.2E-14 113.9 1.4 130 163-305 51-199 (490)
56 2nyc_A Nuclear protein SNF4; b 98.8 2E-09 6.8E-14 91.0 3.1 103 200-305 4-133 (144)
57 2uv4_A 5'-AMP-activated protei 98.7 5.9E-09 2E-13 89.8 4.3 101 200-305 19-143 (152)
58 1vr9_A CBS domain protein/ACT 98.7 3.3E-08 1.1E-12 90.6 8.1 97 204-305 13-122 (213)
59 2pfi_A Chloride channel protei 98.7 7.6E-09 2.6E-13 89.4 3.1 107 195-305 4-139 (164)
60 3t4n_C Nuclear protein SNF4; C 98.5 6.3E-08 2.2E-12 93.2 4.5 103 200-305 183-312 (323)
61 3pc3_A CG1753, isoform A; CBS, 98.5 5.7E-08 1.9E-12 101.2 4.3 100 201-305 381-503 (527)
62 3l2b_A Probable manganase-depe 98.4 8E-08 2.7E-12 89.4 3.9 51 255-305 185-236 (245)
63 2qrd_G Protein C1556.08C; AMPK 98.3 4.2E-07 1.5E-11 87.8 5.1 101 202-305 180-307 (334)
64 2v8q_E 5'-AMP-activated protei 98.2 8.6E-07 2.9E-11 85.6 5.9 101 203-305 189-315 (330)
65 3gby_A Uncharacterized protein 98.2 7.8E-07 2.7E-11 73.9 4.7 51 254-305 4-54 (128)
66 3jtf_A Magnesium and cobalt ef 98.2 7.6E-07 2.6E-11 74.4 2.9 52 254-305 4-58 (129)
67 1vrd_A Inosine-5'-monophosphat 98.2 4.1E-07 1.4E-11 93.9 1.4 110 187-305 82-207 (494)
68 4esy_A CBS domain containing m 98.1 7.3E-07 2.5E-11 78.2 1.7 52 254-305 17-68 (170)
69 3k6e_A CBS domain protein; str 98.1 3E-06 1E-10 73.8 5.4 50 256-305 16-67 (156)
70 3lv9_A Putative transporter; C 98.1 2E-06 6.8E-11 73.3 4.1 52 254-305 22-76 (148)
71 3kpb_A Uncharacterized protein 98.0 1.6E-06 5.5E-11 70.9 2.7 50 256-305 2-51 (122)
72 3nqr_A Magnesium and cobalt ef 98.0 1.2E-06 4.2E-11 72.7 1.7 51 255-305 3-56 (127)
73 2d4z_A Chloride channel protei 98.0 5.9E-06 2E-10 78.1 6.0 44 261-305 195-238 (250)
74 3i8n_A Uncharacterized protein 98.0 1.7E-06 5.9E-11 72.1 1.8 52 254-305 5-59 (130)
75 3lhh_A CBS domain protein; str 98.0 3.4E-06 1.1E-10 74.2 3.8 53 253-305 40-95 (172)
76 3kxr_A Magnesium transporter, 98.0 7.2E-06 2.5E-10 74.8 5.7 52 254-305 53-107 (205)
77 3ocm_A Putative membrane prote 98.0 6.2E-06 2.1E-10 73.0 5.1 52 254-305 35-89 (173)
78 3lfr_A Putative metal ION tran 98.0 1.8E-06 6.1E-11 72.8 1.3 51 255-305 3-56 (136)
79 3ctu_A CBS domain protein; str 97.9 1.1E-05 3.8E-10 69.1 5.5 51 255-305 15-67 (156)
80 2ef7_A Hypothetical protein ST 97.9 2.2E-05 7.4E-10 65.2 6.3 51 254-305 3-53 (133)
81 3hf7_A Uncharacterized CBS-dom 97.8 2.8E-06 9.7E-11 71.1 0.1 50 256-305 3-55 (130)
82 4gqw_A CBS domain-containing p 97.8 5.5E-06 1.9E-10 70.0 1.8 52 254-305 4-57 (152)
83 1jcn_A Inosine monophosphate d 97.8 3E-06 1E-10 88.0 -0.0 99 204-305 108-225 (514)
84 2rih_A Conserved protein with 97.8 1.4E-05 4.6E-10 67.3 3.9 51 255-305 5-57 (141)
85 2p9m_A Hypothetical protein MJ 97.8 6.3E-06 2.1E-10 68.8 1.5 52 254-305 7-58 (138)
86 2yzi_A Hypothetical protein PH 97.7 6.7E-05 2.3E-09 62.5 7.4 52 254-305 6-57 (138)
87 3oco_A Hemolysin-like protein 97.7 7.8E-06 2.7E-10 70.2 1.5 51 255-305 20-74 (153)
88 2uv4_A 5'-AMP-activated protei 97.7 5.3E-05 1.8E-09 64.7 6.4 49 255-305 23-71 (152)
89 3lqn_A CBS domain protein; csg 97.7 1.1E-05 3.8E-10 68.5 1.9 51 255-305 15-67 (150)
90 1pvm_A Conserved hypothetical 97.7 5.2E-05 1.8E-09 67.0 6.3 51 255-305 9-59 (184)
91 2rc3_A CBS domain; in SITU pro 97.7 5.2E-05 1.8E-09 63.1 5.9 49 256-305 7-58 (135)
92 3fv6_A YQZB protein; CBS domai 97.6 2.1E-05 7.3E-10 67.8 3.2 51 254-305 16-66 (159)
93 2emq_A Hypothetical conserved 97.6 1.8E-05 6.2E-10 67.6 2.7 52 254-305 10-63 (157)
94 2nyc_A Nuclear protein SNF4; b 97.6 3.2E-05 1.1E-09 64.6 4.2 51 255-305 8-61 (144)
95 3oi8_A Uncharacterized protein 97.6 1.2E-05 4.1E-10 69.3 1.4 52 254-305 37-91 (156)
96 3fhm_A Uncharacterized protein 97.6 4.4E-05 1.5E-09 66.2 5.0 52 254-305 23-77 (165)
97 3sl7_A CBS domain-containing p 97.6 1.3E-05 4.4E-10 69.9 1.3 51 255-305 4-56 (180)
98 1y5h_A Hypothetical protein RV 97.6 1E-05 3.6E-10 67.1 0.2 51 255-305 8-58 (133)
99 2yvy_A MGTE, Mg2+ transporter 97.6 5.8E-05 2E-09 71.6 5.0 51 255-305 135-190 (278)
100 1yav_A Hypothetical protein BS 97.5 1.5E-05 5.2E-10 68.5 0.7 52 254-305 13-66 (159)
101 1pbj_A Hypothetical protein; s 97.5 1.5E-05 5.1E-10 65.2 -0.2 49 256-305 2-50 (125)
102 2pfi_A Chloride channel protei 97.5 5.6E-05 1.9E-09 64.7 3.2 52 254-305 12-65 (164)
103 4af0_A Inosine-5'-monophosphat 97.4 3E-05 1E-09 80.1 1.4 108 190-305 129-250 (556)
104 2o16_A Acetoin utilization pro 97.4 0.0001 3.5E-09 63.6 4.6 52 254-305 4-55 (160)
105 2oux_A Magnesium transporter; 97.3 5.9E-05 2E-09 72.1 2.2 52 254-305 136-192 (286)
106 1o50_A CBS domain-containing p 97.3 0.00015 5.2E-09 62.1 4.0 51 254-305 15-66 (157)
107 1vr9_A CBS domain protein/ACT 97.3 0.00026 9E-09 64.4 5.7 51 255-305 13-63 (213)
108 4fry_A Putative signal-transdu 97.2 0.00018 6E-09 61.5 3.7 49 256-305 8-62 (157)
109 2zy9_A Mg2+ transporter MGTE; 97.2 0.00019 6.5E-09 73.7 3.6 52 254-305 154-210 (473)
110 2j9l_A Chloride channel protei 97.1 0.001 3.5E-08 58.0 7.2 52 254-305 10-69 (185)
111 3pc3_A CG1753, isoform A; CBS, 96.9 0.00046 1.6E-08 71.6 3.6 52 254-305 383-436 (527)
112 3org_A CMCLC; transporter, tra 96.9 0.0003 1E-08 74.7 2.2 53 253-305 451-506 (632)
113 3usb_A Inosine-5'-monophosphat 96.5 0.00094 3.2E-08 69.3 2.3 48 258-305 116-165 (511)
114 4fxs_A Inosine-5'-monophosphat 96.4 0.0014 4.7E-08 67.8 2.9 49 257-305 91-139 (496)
115 3l2b_A Probable manganase-depe 96.3 0.0029 9.9E-08 58.2 4.7 52 254-305 6-57 (245)
116 1vrd_A Inosine-5'-monophosphat 96.2 0.00087 3E-08 68.9 0.5 49 257-305 97-145 (494)
117 3fio_A A cystathionine beta-sy 96.2 0.0034 1.2E-07 45.9 3.6 41 264-305 1-41 (70)
118 3k2v_A Putative D-arabinose 5- 96.2 0.004 1.4E-07 52.5 4.6 51 255-305 28-80 (149)
119 1me8_A Inosine-5'-monophosphat 95.9 0.0013 4.5E-08 68.0 0.0 45 261-305 103-150 (503)
120 1zfj_A Inosine monophosphate d 95.7 0.0063 2.2E-07 62.3 4.1 49 257-305 92-142 (491)
121 4avf_A Inosine-5'-monophosphat 95.6 0.0022 7.5E-08 66.1 0.3 48 257-305 90-137 (490)
122 3ghd_A A cystathionine beta-sy 95.6 0.0094 3.2E-07 44.8 3.6 41 264-305 1-41 (70)
123 3ghd_A A cystathionine beta-sy 95.0 0.021 7.3E-07 42.7 4.0 53 215-268 1-70 (70)
124 3fio_A A cystathionine beta-sy 94.8 0.025 8.5E-07 41.1 4.0 51 216-267 2-69 (70)
125 1jcn_A Inosine monophosphate d 94.8 0.0035 1.2E-07 64.8 -1.1 50 256-305 109-161 (514)
126 2cu0_A Inosine-5'-monophosphat 94.7 0.0061 2.1E-07 62.6 0.3 47 258-305 96-142 (486)
127 2d4z_A Chloride channel protei 92.9 0.086 2.9E-06 49.3 4.7 52 254-305 12-65 (250)
128 4af0_A Inosine-5'-monophosphat 91.4 0.036 1.2E-06 57.5 0.0 45 261-305 144-191 (556)
129 2jaf_A Halorhodopsin, HR; chro 35.4 2.8E+02 0.0094 25.8 11.6 40 109-150 178-217 (274)
130 3iz5_e 60S ribosomal protein L 27.4 15 0.0005 34.2 0.3 32 274-305 101-132 (244)
131 3arc_L Photosystem II reaction 24.9 70 0.0024 20.6 3.1 20 11-30 17-36 (37)
132 1xio_A Anabaena sensory rhodop 24.9 3.6E+02 0.012 24.7 9.5 42 108-150 144-186 (261)
133 3qbg_A Halorhodopsin; membrane 24.7 4.3E+02 0.015 24.7 10.1 23 128-150 210-232 (291)
134 3jyw_F 60S ribosomal protein L 24.5 20 0.0007 32.4 0.7 14 383-396 145-158 (213)
135 3ug9_A Archaeal-type opsin 1, 22.3 5E+02 0.017 24.9 10.1 23 128-150 227-249 (333)
136 1m0k_A BR, bacteriorhodopsin; 20.6 4.9E+02 0.017 23.8 9.6 22 129-150 184-205 (262)
No 1
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.83 E-value=8.1e-21 Score=166.43 Aligned_cols=136 Identities=23% Similarity=0.310 Sum_probs=122.8
Q ss_pred cccHHHHHHHHHhhccccccCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc
Q 015949 164 LFRRAELKTLVDLHGNEAGKGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV 243 (397)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV 243 (397)
.+|++||+.+++. +.++|.++++|+++++++++|.+.+|+++|+|+.++++++.++++. ++++.+.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 3799999999984 4567999999999999999999999999999999999999999998 9999999999999999
Q ss_pred --------------hhhcccCCC-CCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 244 --------------KNLLTIHPE-DEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 244 --------------kDll~~~~~-~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+|++..... ...++.++ ++++++|++++++.++++.|++.+.+.++|+|++|...|+++..
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~i-m~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~ 152 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSI-LRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFE 152 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHH-CBCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHH
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHH-cCCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHH
Confidence 455554333 45678998 58899999999999999999999999999999999999999873
No 2
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.79 E-value=4.4e-20 Score=164.43 Aligned_cols=138 Identities=22% Similarity=0.400 Sum_probs=89.4
Q ss_pred cccccHHHHHHHHHhhccccccCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcc
Q 015949 162 EALFRRAELKTLVDLHGNEAGKGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRV 241 (397)
Q Consensus 162 ~~~~s~eEL~~lv~~~~~e~~~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~ 241 (397)
.+.+|++||+.+++ ++.+.|.++++|++++++++.|.+.+|+++|+|+.++++++.++++. ++++.+.+++++++
T Consensus 4 ~~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~ 78 (172)
T 3lhh_A 4 DDNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRF 78 (172)
T ss_dssp -------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEE
T ss_pred cccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEE
Confidence 35689999999998 35567999999999999999999999999999999999999999998 99999999999999
Q ss_pred cc--------------hhhcccC-CCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 242 PV--------------KNLLTIH-PEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 242 PV--------------kDll~~~-~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
|| +|++... .+...++.++| +++++|++++++.++++.|++.+.+.++|+|++|...|+++..
T Consensus 79 pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~ 156 (172)
T 3lhh_A 79 PVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQ 156 (172)
T ss_dssp EEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred EEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHH
Confidence 99 4444432 22367899996 9999999999999999999999999999999999999999984
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.70 E-value=1.3e-17 Score=149.23 Aligned_cols=122 Identities=20% Similarity=0.313 Sum_probs=106.3
Q ss_pred cccCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhh
Q 015949 181 AGKGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNL 246 (397)
Q Consensus 181 ~~~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDl 246 (397)
+.++|.++++|++++++++.|.+.+|+++|+|+.++++++.++++. ++++.+.+++|+++|| +|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 3467999999999999999999999999999999999999999998 9999999999999999 445
Q ss_pred cccC-CCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 247 LTIH-PEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 247 l~~~-~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+... .....++. + ++++++|++++++.++++.|++++.|+++|+|++|...|+++..
T Consensus 92 ~~~~~~~~~~~v~-~-~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~ 149 (173)
T 3ocm_A 92 VADLITEGRVRRN-R-LRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPI 149 (173)
T ss_dssp HHHHHHHSSCCGG-G-SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHH
T ss_pred HHHHhcCCcchhH-h-cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHH
Confidence 4332 11345677 5 79999999999999999999999999999999999999999985
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.69 E-value=9.2e-18 Score=144.90 Aligned_cols=121 Identities=21% Similarity=0.364 Sum_probs=94.6
Q ss_pred cCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhcc
Q 015949 183 KGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLT 248 (397)
Q Consensus 183 ~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~ 248 (397)
++|.++++|++++++++.+.+.+|+|+|+|+.++++++.++++. ++++.+.+++++++|| +|++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 35899999999999999999999999999999999999999998 9999999999999999 34443
Q ss_pred cCCC-CCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 249 IHPE-DEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 249 ~~~~-~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.... ...++.++| +++++|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~ 137 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIE 137 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHH
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 3211 267899996 9999999999999999999999999999999999999999874
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.57 E-value=4.6e-16 Score=135.25 Aligned_cols=117 Identities=22% Similarity=0.350 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc---------------hhhcccC-
Q 015949 187 LTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV---------------KNLLTIH- 250 (397)
Q Consensus 187 l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV---------------kDll~~~- 250 (397)
++++|++++++++.|++.+|+++|+|+.++++++.++++. ++++.+.+++++++|| +|++...
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6788999999999999999999999999999999999998 9999999999999999 3343321
Q ss_pred CCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 251 PEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 251 ~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.....+++++| +++++|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~ 135 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDK 135 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHH
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHH
Confidence 12357899996 9999999999999999999999999999999999999999985
No 6
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.53 E-value=1.3e-14 Score=122.51 Aligned_cols=103 Identities=28% Similarity=0.416 Sum_probs=90.8
Q ss_pred cccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhcccCCCCCCCcccccccCCc
Q 015949 201 LSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLTIHPEDEVPVKNVSIRRIP 266 (397)
Q Consensus 201 l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~~~~~~~~~v~~i~~r~~~ 266 (397)
.++.+|+|+|+|+.++++++.++++. ++++.+.+++++++|| +|++.....+..++.++ +++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~-m~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSL-VRPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGG-CBCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHH-hCCCe
Confidence 36789999999999999999999998 9999999999999999 55555443456789998 68899
Q ss_pred EecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 267 RVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 267 ~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHH
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 999999999999999999999999999999999999874
No 7
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.50 E-value=2.1e-14 Score=139.55 Aligned_cols=120 Identities=8% Similarity=0.112 Sum_probs=100.0
Q ss_pred CCCCHHHHHHHHHhhcc-ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhccc
Q 015949 185 GELTRDETTIITGALEL-SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLTI 249 (397)
Q Consensus 185 G~l~~~E~~ii~~~l~l-~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~~ 249 (397)
+.++++|+.+++++++| ++++|+|+|+|+.++++++.++++. ++++.+.+++|+++|| +|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~ 80 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNV 80 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 34678899999999994 5599999999999999999999998 9999999999999999 555542
Q ss_pred C--------CCC------CCCccc-------ccccCC--cEecCCCCHHHHHHHHHhCCceEEEEEecCCC-----cccc
Q 015949 250 H--------PED------EVPVKN-------VSIRRI--PRVSETMPLYDILNEFQKGHSHMAVVVRHQND-----REQP 301 (397)
Q Consensus 250 ~--------~~~------~~~v~~-------i~~r~~--~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~-----~~g~ 301 (397)
. ... ..++.. +|.+++ ++|++++++.++++.|++.+.|.++|+|++|+ ..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Gi 160 (334)
T 2qrd_G 81 IKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSV 160 (334)
T ss_dssp HHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEE
T ss_pred HHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEE
Confidence 1 111 222322 245777 99999999999999999999999999999987 8999
Q ss_pred cccc
Q 015949 302 HVPI 305 (397)
Q Consensus 302 ~~~~ 305 (397)
++..
T Consensus 161 vt~~ 164 (334)
T 2qrd_G 161 LTQY 164 (334)
T ss_dssp EEHH
T ss_pred eeHH
Confidence 9884
No 8
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.48 E-value=4.1e-14 Score=120.56 Aligned_cols=102 Identities=29% Similarity=0.422 Sum_probs=89.9
Q ss_pred ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhcccCC---CCCCCcccccccC
Q 015949 202 SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLTIHP---EDEVPVKNVSIRR 264 (397)
Q Consensus 202 ~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~~~~---~~~~~v~~i~~r~ 264 (397)
++.+|+++|+|+.++++++.++++. ++++.+.+++++++|| +|++.... ....+++++ +++
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~-m~~ 78 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKL-LRP 78 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGT-CBC
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHH-cCC
Confidence 3678999999999999999999998 9999999999999999 55554322 235678998 588
Q ss_pred CcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 265 IPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 265 ~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~ 119 (136)
T 3lfr_A 79 ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIE 119 (136)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHH
T ss_pred CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 99999999999999999999999999999999999999985
No 9
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=2e-14 Score=121.81 Aligned_cols=101 Identities=21% Similarity=0.290 Sum_probs=88.7
Q ss_pred cceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhcccCCCC----CCCcccccccC
Q 015949 203 EKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLTIHPED----EVPVKNVSIRR 264 (397)
Q Consensus 203 ~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~~~~~~----~~~v~~i~~r~ 264 (397)
+.+|+|+|+|+.++++++.++++. ++++.+.+++++++|| +|++....++ ..++.++ +++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~-m~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRA-ADE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHH-SBC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHh-ccC
Confidence 368999999999999999999998 9999999999999999 4555433221 2457888 599
Q ss_pred CcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 265 IPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 265 ~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~ 119 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVE 119 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHH
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHH
Confidence 99999999999999999999999999999999999999874
No 10
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.46 E-value=2.7e-13 Score=124.68 Aligned_cols=126 Identities=6% Similarity=0.029 Sum_probs=109.7
Q ss_pred ccHHHHHHHHHhhccccccCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhc---CCCcc
Q 015949 165 FRRAELKTLVDLHGNEAGKGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEK---GHSRV 241 (397)
Q Consensus 165 ~s~eEL~~lv~~~~~e~~~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~---g~SR~ 241 (397)
+.+++.+.++. .++++|++++++++.+.+.+|+++|+| ++++++.+.++. ++++.+.+. +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 44555566654 378999999999999999999999998 788999999998 999999986 77888
Q ss_pred cc-------------hhhcccCCCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 242 PV-------------KNLLTIHPEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 242 PV-------------kDll~~~~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
|| +|++.. ....+++++|.+++++|++++++.++++.|++.+.+.++|||++|...|+++..
T Consensus 92 ~Vvd~~~~lvGivt~~dll~~--~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~ 166 (205)
T 3kxr_A 92 FIVDEADKYLGTVRRYDIFKH--EPHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLR 166 (205)
T ss_dssp EEECTTCBEEEEEEHHHHTTS--CTTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHH
T ss_pred EEEcCCCeEEEEEEHHHHHhC--CCcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHH
Confidence 88 566643 245679999768899999999999999999999999999999999999999985
No 11
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.45 E-value=2.2e-14 Score=126.09 Aligned_cols=110 Identities=14% Similarity=0.188 Sum_probs=93.4
Q ss_pred HHHHHhh-ccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccC----C---
Q 015949 193 TIITGAL-ELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIH----P--- 251 (397)
Q Consensus 193 ~ii~~~l-~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~----~--- 251 (397)
.||.+.| +|-..+++++|||+.++++++.++|++ ++++.+.++|||++|| +|++... .
T Consensus 3 ami~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 3 AMIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred chHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccc
Confidence 3566666 366778999999999999999999998 9999999999999999 5655421 1
Q ss_pred -CCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 252 -EDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 252 -~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
....++.++|.+++++|++++++.++++.|++++ +++|||++|...|+++..
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~ 134 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRK 134 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHH
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHH
Confidence 1256789998889999999999999999998764 589999999999999985
No 12
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.45 E-value=2.5e-14 Score=120.73 Aligned_cols=104 Identities=16% Similarity=0.231 Sum_probs=88.2
Q ss_pred ccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhcccC--CCCCCCccccccc
Q 015949 200 ELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLTIH--PEDEVPVKNVSIR 263 (397)
Q Consensus 200 ~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~~~--~~~~~~v~~i~~r 263 (397)
+|++.+|+|+|+|+.++++++.++++. ++++.+.+++++++|| +|++... .....++.++ ++
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~-m~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAV-MR 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHH-SE
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHH-hc
Confidence 478899999999999999999999998 9999999999999999 4444432 1235678998 58
Q ss_pred CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 264 RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 264 ~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++++|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~ 121 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLE 121 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHH
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHH
Confidence 999999999999999999999999999999999999999874
No 13
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.43 E-value=1.2e-13 Score=115.92 Aligned_cols=102 Identities=26% Similarity=0.428 Sum_probs=89.3
Q ss_pred ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhcccC--CCCCCCcccccccCC
Q 015949 202 SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLTIH--PEDEVPVKNVSIRRI 265 (397)
Q Consensus 202 ~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~~~--~~~~~~v~~i~~r~~ 265 (397)
++.+|+|+|+|+.++++++.++++. ++++.+.+++++++|| +|++... .....+++++ ++++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~-m~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKV-LRTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHH-CBCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHH-cCCC
Confidence 3678999999998999999999998 9999999999999999 4555432 2245678998 5889
Q ss_pred cEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 266 PRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 266 ~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~ 118 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIE 118 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHH
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 9999999999999999999999999999999999999874
No 14
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.41 E-value=8.4e-14 Score=134.69 Aligned_cols=123 Identities=11% Similarity=0.232 Sum_probs=100.5
Q ss_pred ccCCCCCHHHHHHHHHhhcc-ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhh
Q 015949 182 GKGGELTRDETTIITGALEL-SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNL 246 (397)
Q Consensus 182 ~~~G~l~~~E~~ii~~~l~l-~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDl 246 (397)
.+.|.++++|+++++++++| .+.+++|+|+|+.++++++.++++. ++++.+.+++++++|| +|+
T Consensus 7 ~~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl 85 (323)
T 3t4n_C 7 DSQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDF 85 (323)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHH
Confidence 34578999999999999998 9999999999999999999999998 9999999999999999 344
Q ss_pred cccC------CC--------CCCCccc------ccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCC-----cccc
Q 015949 247 LTIH------PE--------DEVPVKN------VSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQND-----REQP 301 (397)
Q Consensus 247 l~~~------~~--------~~~~v~~------i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~-----~~g~ 301 (397)
+... +. ....+++ +|.+++.++++++++.++++.|++++.+.++|+|++|+ ..|+
T Consensus 86 ~~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Gi 165 (323)
T 3t4n_C 86 INVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSV 165 (323)
T ss_dssp HHHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEE
T ss_pred HHHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEE
Confidence 3321 00 0011222 22478899999999999999999999999999999987 8999
Q ss_pred cccc
Q 015949 302 HVPI 305 (397)
Q Consensus 302 ~~~~ 305 (397)
++..
T Consensus 166 vt~~ 169 (323)
T 3t4n_C 166 LTQY 169 (323)
T ss_dssp EEHH
T ss_pred ecHH
Confidence 8874
No 15
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.36 E-value=9e-13 Score=126.19 Aligned_cols=116 Identities=13% Similarity=0.121 Sum_probs=104.5
Q ss_pred CCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhc-----CCCcccc-------------hhh
Q 015949 185 GELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEK-----GHSRVPV-------------KNL 246 (397)
Q Consensus 185 G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~-----g~SR~PV-------------kDl 246 (397)
|.++..++..+.+++.+.+.+|+++|+| ++++++.+.++. ++++.+.++ +++++|| +|+
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dl 192 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDL 192 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHH
Confidence 4688999999999999999999999998 788999999998 999999988 6799999 555
Q ss_pred cccCCCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 247 LTIHPEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 247 l~~~~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.. ....++.++|.+++++|++++++.++++.|++.+.+.++|||++|...|+++..
T Consensus 193 l~~--~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~ 249 (278)
T 2yvy_A 193 IVA--DPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVD 249 (278)
T ss_dssp HHS--CTTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHH
T ss_pred hcC--CCCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHH
Confidence 543 245689999768999999999999999999999999999999999999999985
No 16
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.36 E-value=1.2e-12 Score=134.90 Aligned_cols=133 Identities=13% Similarity=0.116 Sum_probs=116.7
Q ss_pred cccHHHHHHHHHhhccccccC---------CCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHH
Q 015949 164 LFRRAELKTLVDLHGNEAGKG---------GELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVL 234 (397)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~---------G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~ 234 (397)
.+++||+..+++.. .++ +.++.+|++++.+++++.+.+|+++|+| ++++++.+.+++ ++++.+.
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46788888888732 234 7899999999999999999999999998 799999999998 9999999
Q ss_pred hcC-----CCcccc-------------hhhcccCCCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCC
Q 015949 235 EKG-----HSRVPV-------------KNLLTIHPEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQN 296 (397)
Q Consensus 235 ~~g-----~SR~PV-------------kDll~~~~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG 296 (397)
+++ ++++|| +|++.. ..+.+++++|.+++++|++++++.++++.|++.+.+.++|||++|
T Consensus 183 ~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~--~~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g 260 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--DPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEG 260 (473)
T ss_dssp HHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS--CTTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred hccCCcCceeEEEEECCCCcEEEEEEHHHHhcC--CCCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCC
Confidence 874 689999 566543 345789999768999999999999999999999999999999999
Q ss_pred Ccccccccc
Q 015949 297 DREQPHVPI 305 (397)
Q Consensus 297 ~~~g~~~~~ 305 (397)
...|+++..
T Consensus 261 ~lvGiIT~~ 269 (473)
T 2zy9_A 261 RLVGIVTVD 269 (473)
T ss_dssp BEEEEEEHH
T ss_pred EEEEEEehH
Confidence 999999985
No 17
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.36 E-value=1e-13 Score=134.68 Aligned_cols=121 Identities=13% Similarity=0.210 Sum_probs=95.2
Q ss_pred ccCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhc
Q 015949 182 GKGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLL 247 (397)
Q Consensus 182 ~~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll 247 (397)
+++|.+.+.|++.+++. |++.+|+|+|+|+.++++++.++++. ++++.+.+++|+++|| +|++
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 45677878888888887 57899999999999999999999998 9999999999999999 4544
Q ss_pred ccCC------C------CCCC-------cccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEec-CCCcccccccc
Q 015949 248 TIHP------E------DEVP-------VKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRH-QNDREQPHVPI 305 (397)
Q Consensus 248 ~~~~------~------~~~~-------v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDE-yG~~~g~~~~~ 305 (397)
.... . ...+ +.++|.+++++|++++++.++++.|++++.+.++|+|+ +|...|+++..
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~ 169 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHK 169 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHH
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHH
Confidence 3210 0 0111 23456788999999999999999999999999999999 99999999984
No 18
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.30 E-value=1.3e-12 Score=124.67 Aligned_cols=128 Identities=14% Similarity=0.183 Sum_probs=104.2
Q ss_pred cccHHHHHHHHHhhccccccCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc
Q 015949 164 LFRRAELKTLVDLHGNEAGKGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV 243 (397)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV 243 (397)
.+|.+||...+.. +.+. .+...+.+.+.+.+|+++|+| ++++++.++++. ++++.+.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~~-------~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCKD-------SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cccc-------cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 5788888776641 1100 344556667778999999998 677999999998 9999999999999999
Q ss_pred -------------hhhcccCC--CCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 244 -------------KNLLTIHP--EDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 244 -------------kDll~~~~--~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+|++.... ....++.++|.++++++++++++.++++.|++.+.+.++|+|++|...|+++..
T Consensus 130 vd~~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~ 206 (296)
T 3ddj_A 130 VDINDKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVV 206 (296)
T ss_dssp ECTTSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred EcCCCcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHH
Confidence 56665322 234578898778999999999999999999999999999999999999999984
No 19
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.18 E-value=1.5e-11 Score=115.48 Aligned_cols=131 Identities=10% Similarity=0.134 Sum_probs=100.4
Q ss_pred cccHHHHHHHHHhhccccccCCCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc
Q 015949 164 LFRRAELKTLVDLHGNEAGKGGELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV 243 (397)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV 243 (397)
.+|.+||...+.. ..+.+.+.. ....+.+...+.+|+++|+| ++++++.++++. ++++.+.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIRE---KHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHHT---TSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhhh---ccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 5788888877641 111111111 11223344457899999997 778999999998 9999999999999999
Q ss_pred -------------hhhcccCC---CCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 244 -------------KNLLTIHP---EDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 244 -------------kDll~~~~---~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+|++.... ....++.++|.++++++++++++.++++.|++.+.+.++|+ ++|...|+++..
T Consensus 121 vd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~ 197 (280)
T 3kh5_A 121 VNDENQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITST 197 (280)
T ss_dssp ECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHH
T ss_pred EcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHH
Confidence 56554321 22347889877899999999999999999999999999999 789999999985
No 20
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.16 E-value=4.7e-11 Score=105.30 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=91.9
Q ss_pred HHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC----
Q 015949 190 DETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE---- 252 (397)
Q Consensus 190 ~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~---- 252 (397)
.++..+.+. +++.+|+|+|++ ++++++.++++. ++++.+.+++++.+|| +|++.....
T Consensus 6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhcccc
Confidence 334445554 468999999996 788999999998 9999999999999999 566543110
Q ss_pred ----------------------CCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 253 ----------------------DEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 253 ----------------------~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
...++.++|.+++++|++++++.++++.|.+++.|..+|+|+ |...|+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGivt~~ 154 (170)
T 4esy_A 81 EASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD-GVPVGIVTRR 154 (170)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHH
T ss_pred chhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHH
Confidence 134678888889999999999999999999999999999996 9999999984
No 21
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.16 E-value=2.2e-11 Score=103.92 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=89.5
Q ss_pred ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccC-----------------C
Q 015949 202 SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIH-----------------P 251 (397)
Q Consensus 202 ~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~-----------------~ 251 (397)
...+|+|+|+|+.++++++.++++. ++++.+.+++++++|| +|++... .
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSK 81 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC---
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHH
Confidence 4578999999998999999999998 9999999999999999 5665421 1
Q ss_pred CCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 252 EDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 252 ~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
....++.++|.+++++|++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 82 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~ 135 (152)
T 4gqw_A 82 TNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRG 135 (152)
T ss_dssp --CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHH
T ss_pred hccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHH
Confidence 124678888777789999999999999999999999999999999999999984
No 22
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.16 E-value=3e-11 Score=104.33 Aligned_cols=108 Identities=17% Similarity=0.159 Sum_probs=88.0
Q ss_pred HHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC---------
Q 015949 195 ITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE--------- 252 (397)
Q Consensus 195 i~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~--------- 252 (397)
..+...|.+.+|+++|+|+.++++++.++++. ++++.+.+++++++|| +|++.....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHh
Confidence 34566788999999999988899999999998 9999999999999999 455543221
Q ss_pred CCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 253 DEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 253 ~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
...++.++|.++++++++++++.++++.|.+.+. ++|+|+.|...|+++..
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~ 131 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRR 131 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHH
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHH
Confidence 3467889877889999999999999999999976 88999999999999984
No 23
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.14 E-value=9.1e-11 Score=112.97 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=104.1
Q ss_pred CCCCHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhc-----CCCcccc-------------hhh
Q 015949 185 GELTRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEK-----GHSRVPV-------------KNL 246 (397)
Q Consensus 185 G~l~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~-----g~SR~PV-------------kDl 246 (397)
+.++.+|+..+.+.+.+.+.+|+++|+| ++++++.+.++. ++++.+.++ +++++|| +|+
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dl 194 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDL 194 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHH
Confidence 3588889999999999999999999997 788999999998 999999998 8899999 555
Q ss_pred cccCCCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 247 LTIHPEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 247 l~~~~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.. ....++.++|.+++++|++++++.++++.|++.+.+.++|||++|...|+++..
T Consensus 195 l~~--~~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~ 251 (286)
T 2oux_A 195 IVN--DDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVD 251 (286)
T ss_dssp TTS--CTTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHH
T ss_pred HcC--CCCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHH
Confidence 543 235679999778999999999999999999999999999999999999999985
No 24
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.13 E-value=1.7e-11 Score=106.04 Aligned_cols=108 Identities=14% Similarity=0.162 Sum_probs=92.4
Q ss_pred HHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC--------C
Q 015949 195 ITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE--------D 253 (397)
Q Consensus 195 i~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~--------~ 253 (397)
-....+|...+|+|+|+|+.++++++.++++. ++++.+.+++++++|| +|++..... .
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccc
Confidence 34555788889999999999999999999998 9999999999999999 555543211 1
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..++.++|.+++++|++++++.++++.|.+.+ ..+|+|+.|...|+++..
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~ 134 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRK 134 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETT
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHH
Confidence 56799997788999999999999999999886 588999999999999985
No 25
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.10 E-value=3.3e-11 Score=103.45 Aligned_cols=105 Identities=16% Similarity=0.145 Sum_probs=90.7
Q ss_pred hhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCC---------CCCC
Q 015949 198 ALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHP---------EDEV 255 (397)
Q Consensus 198 ~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~---------~~~~ 255 (397)
.-.|.+.+|+++|+|..++.+++.++++. ++++.+.+++++++|| +|++.... ....
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 34578899999999988899999999998 9999999999999999 56654321 1346
Q ss_pred CcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 256 PVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++.++|.+++++|++++++.++++.|.+++. .+|+|+.|...|+++..
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~ 135 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRR 135 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHH
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHH
Confidence 7899977889999999999999999999886 88999999999999984
No 26
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.10 E-value=1.8e-10 Score=108.20 Aligned_cols=98 Identities=11% Similarity=0.136 Sum_probs=82.5
Q ss_pred eeccc-ceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--------------hhhcccCCC-----------------
Q 015949 205 TARDA-MTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--------------KNLLTIHPE----------------- 252 (397)
Q Consensus 205 ~V~di-MtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--------------kDll~~~~~----------------- 252 (397)
++++. |++ ++++++.++++. ++++.+.+++++++|| +|++.....
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 34454 554 789999999998 9999999999999999 455443211
Q ss_pred -CCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 253 -DEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 253 -~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+.+++++|.+++++|++++++.++++.|++++.+.++|+|+.|...|+++..
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~ 134 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITER 134 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHH
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHH
Confidence 13478999777899999999999999999999999999999999999999985
No 27
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.09 E-value=5.2e-11 Score=98.30 Aligned_cols=99 Identities=8% Similarity=0.151 Sum_probs=86.5
Q ss_pred ceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCCCCCCcccccccCCcEecC
Q 015949 204 KTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPEDEVPVKNVSIRRIPRVSE 270 (397)
Q Consensus 204 ~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~~~~~v~~i~~r~~~~Vpe 270 (397)
.+|+++|+| ++.+++.++++. ++++.+.+++++++|| +|++........++.++|.++++++++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~~ 77 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAHE 77 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEET
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEECC
Confidence 378999998 577999999998 9999999999999999 455544333445799997788999999
Q ss_pred CCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 271 TMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 271 ~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 78 ~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~ 112 (122)
T 3kpb_A 78 DEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSE 112 (122)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHH
T ss_pred CCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHH
Confidence 99999999999999999999999999999999874
No 28
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.08 E-value=9.7e-11 Score=98.28 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=88.5
Q ss_pred cccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc------------hhhcccC---CCCCCCcccccccCC
Q 015949 201 LSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV------------KNLLTIH---PEDEVPVKNVSIRRI 265 (397)
Q Consensus 201 l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV------------kDll~~~---~~~~~~v~~i~~r~~ 265 (397)
|++.+|+++|+| ++.+++.++++. ++++.+.+++++++|| +|++... .....++.++|.+++
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~ 77 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKGKSLETKAEEFMTASL 77 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECC
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCC
Confidence 467899999998 577999999998 9999999999999999 4554431 123567899976889
Q ss_pred cEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 266 PRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 266 ~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++++++.++++.|++++.+.++|+|+.|...|+++..
T Consensus 78 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~ 117 (133)
T 2ef7_A 78 ITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIR 117 (133)
T ss_dssp CCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHH
Confidence 9999999999999999999999999999999999999984
No 29
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.06 E-value=6.6e-11 Score=104.15 Aligned_cols=102 Identities=20% Similarity=0.151 Sum_probs=89.3
Q ss_pred cceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccC-------------------
Q 015949 203 EKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIH------------------- 250 (397)
Q Consensus 203 ~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~------------------- 250 (397)
..+|+++|+|+.++++++.++++. ++++.+.+++++++|| +|++...
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 81 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDST 81 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------C
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccch
Confidence 468999999998999999999998 9999999999999999 5665321
Q ss_pred ------------CCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 251 ------------PEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 251 ------------~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.....++.++|.+++++|++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~ 148 (180)
T 3sl7_A 82 WKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRG 148 (180)
T ss_dssp CCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHH
T ss_pred hhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHH
Confidence 1124578888777789999999999999999999999999999999999999984
No 30
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.04 E-value=3.7e-11 Score=124.57 Aligned_cols=130 Identities=14% Similarity=0.187 Sum_probs=100.0
Q ss_pred ccccHHHHHHHHHhhccccccCCCC-----CHHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcC
Q 015949 163 ALFRRAELKTLVDLHGNEAGKGGEL-----TRDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKG 237 (397)
Q Consensus 163 ~~~s~eEL~~lv~~~~~e~~~~G~l-----~~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g 237 (397)
+.+|++|+...+...+ .-|.| .+++.+++.++ ++++++|++ ++++++.+++++ ++++.+.+++
T Consensus 52 dtVTe~~ma~a~a~~G----GiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQEG----GIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHcC----CcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 4678999998886432 23445 66778999998 677899994 778999999998 9999999999
Q ss_pred CCcccc-------------hhhcccCCCCCCCcccccc-c-CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCccccc
Q 015949 238 HSRVPV-------------KNLLTIHPEDEVPVKNVSI-R-RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPH 302 (397)
Q Consensus 238 ~SR~PV-------------kDll~~~~~~~~~v~~i~~-r-~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~ 302 (397)
||++|| +|++.. .....++.++|. + +++++++++++.++++.|++++.++++||||+|...|++
T Consensus 120 ~s~~PVvd~~~~lvGiVt~rDL~~~-~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiI 198 (496)
T 4fxs_A 120 FAGFPVVTENNELVGIITGRDVRFV-TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMI 198 (496)
T ss_dssp CCEEEEECSSSBEEEEEEHHHHTTC-CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEE
T ss_pred CcEEEEEccCCEEEEEEEHHHHhhc-ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEee
Confidence 999999 566532 234678999954 3 699999999999999999999999999999999999999
Q ss_pred ccc
Q 015949 303 VPI 305 (397)
Q Consensus 303 ~~~ 305 (397)
+..
T Consensus 199 T~~ 201 (496)
T 4fxs_A 199 TAK 201 (496)
T ss_dssp CCC
T ss_pred hHh
Confidence 986
No 31
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.03 E-value=3.4e-10 Score=95.49 Aligned_cols=103 Identities=13% Similarity=0.193 Sum_probs=89.2
Q ss_pred hccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhc-ccCC---CCCCCccccc
Q 015949 199 LELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLL-TIHP---EDEVPVKNVS 261 (397)
Q Consensus 199 l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll-~~~~---~~~~~v~~i~ 261 (397)
+.|.+.+|+++|++ ++.+++.++++. ++++.+.+++++.+|| +|++ .... ....++.++|
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m 78 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIM 78 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTC
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHh
Confidence 56889999999996 677999999998 9999999999999999 5665 2222 2356789997
Q ss_pred ccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 262 IRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 262 ~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.++++++++++++.++++.|.+++.+.+ |+|+.|...|+++..
T Consensus 79 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~ 121 (138)
T 2yzi_A 79 TRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLS 121 (138)
T ss_dssp BCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHH
T ss_pred hCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHH
Confidence 7889999999999999999999999988 999999999999984
No 32
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.02 E-value=1.7e-10 Score=122.94 Aligned_cols=102 Identities=13% Similarity=-0.024 Sum_probs=87.7
Q ss_pred ccceecccceeCccEEEEeCCCChhHHHHHHHH-hcCCCcccc-------------hhhcccCCCC--------------
Q 015949 202 SEKTARDAMTPASETFAIDVSFKLDRNLMRLVL-EKGHSRVPV-------------KNLLTIHPED-------------- 253 (397)
Q Consensus 202 ~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~-~~g~SR~PV-------------kDll~~~~~~-------------- 253 (397)
++.+|+|+|+||.++.+++.+++++ |+.+.+. +++|+++|| +|++......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 6789999999999999999999998 9999999 799999999 5665432110
Q ss_pred -------------------------------------CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCC
Q 015949 254 -------------------------------------EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQN 296 (397)
Q Consensus 254 -------------------------------------~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG 296 (397)
..++.++|.+++++|++++++.++++.|++++.|.++|+ |+|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 002677888999999999999999999999999999999 899
Q ss_pred Ccccccccc
Q 015949 297 DREQPHVPI 305 (397)
Q Consensus 297 ~~~g~~~~~ 305 (397)
...|+++..
T Consensus 609 ~lvGIVT~~ 617 (632)
T 3org_A 609 KLVGIVERE 617 (632)
T ss_dssp EEEEEEEGG
T ss_pred EEEEEEehh
Confidence 999999995
No 33
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.02 E-value=1.1e-10 Score=100.56 Aligned_cols=100 Identities=15% Similarity=0.110 Sum_probs=87.1
Q ss_pred ceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC----CCCCcccccccCCc
Q 015949 204 KTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE----DEVPVKNVSIRRIP 266 (397)
Q Consensus 204 ~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~----~~~~v~~i~~r~~~ 266 (397)
.+|+|+|+|+.++.+++.++++. ++++.+.+++++++|| +|++....+ ...++.++|.++++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 106 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGI 106 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESCC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCCe
Confidence 59999999988999999999998 9999999999999999 555543211 35678998778899
Q ss_pred EecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 267 RVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 267 ~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+|+++.++.++++.|++.+.+.++|+|+. ...|+++..
T Consensus 107 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~ 144 (149)
T 3k2v_A 107 RIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMH 144 (149)
T ss_dssp EECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHH
Confidence 99999999999999999999999999985 889998863
No 34
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.99 E-value=3.2e-10 Score=94.87 Aligned_cols=101 Identities=11% Similarity=0.026 Sum_probs=87.6
Q ss_pred ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc------------hhhcccCCCC---CCCcccccccCCc
Q 015949 202 SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV------------KNLLTIHPED---EVPVKNVSIRRIP 266 (397)
Q Consensus 202 ~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV------------kDll~~~~~~---~~~v~~i~~r~~~ 266 (397)
.+.+|+++|++. +.+++.++++. ++++.+.+++++.+|| +|++....+. ..++.++|.++++
T Consensus 3 ~s~~v~~~m~~~--~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 3 ASVTFSYLAETD--YPVFTLGGSTA-DAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVR 79 (128)
T ss_dssp TTCBGGGGCBCC--SCCEETTSBHH-HHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBCCC
T ss_pred cceEHHHhhcCC--cceECCCCCHH-HHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhhCCcccCcHHHHccCCCc
Confidence 467999999974 66999999998 9999999999999999 5666543322 2568999778899
Q ss_pred EecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 267 RVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 267 ~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++++++++.++++.|.+.+.+..+|+|+.|...|+++..
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~ 118 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRK 118 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHH
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHH
Confidence 999999999999999999999999999999999999874
No 35
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.99 E-value=2e-10 Score=100.58 Aligned_cols=107 Identities=7% Similarity=0.026 Sum_probs=92.8
Q ss_pred HhhccccceecccceeC-ccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccC-----CCCCCCc
Q 015949 197 GALELSEKTARDAMTPA-SETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIH-----PEDEVPV 257 (397)
Q Consensus 197 ~~l~l~~~~V~diMtPr-~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~-----~~~~~~v 257 (397)
....+...+|+|+|+|+ .++.+++.++++. ++++.+.+++++++|| +|++... .....++
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v 95 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSV 95 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBG
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCH
Confidence 34567889999999996 6788999999998 9999999999999999 5555421 1235679
Q ss_pred ccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 258 KNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 258 ~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.++|.+++++|++++++.++++.|.+.+.+..+|+|+ |...|+++..
T Consensus 96 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~ 142 (165)
T 3fhm_A 96 SVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIG 142 (165)
T ss_dssp GGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHH
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHH
Confidence 9997788999999999999999999999999999999 9999999985
No 36
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.98 E-value=5.4e-10 Score=99.68 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=87.1
Q ss_pred ceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCC-----CCCCCcccccccCC
Q 015949 204 KTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHP-----EDEVPVKNVSIRRI 265 (397)
Q Consensus 204 ~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~-----~~~~~v~~i~~r~~ 265 (397)
.+|+++|++ ++++++.++++. ++++.+.+++++++|| +|++.... ....++.++|.+++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 689999985 788999999998 9999999999999999 55654322 23567899976789
Q ss_pred cEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 266 PRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 266 ~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++|++++++.++++.|++++.+.++|+|++|...|+++..
T Consensus 86 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~ 125 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLT 125 (184)
T ss_dssp CEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHH
T ss_pred cEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHH
Confidence 9999999999999999999999999999999999999985
No 37
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.97 E-value=2e-10 Score=99.78 Aligned_cols=103 Identities=18% Similarity=0.229 Sum_probs=88.5
Q ss_pred ccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCC---------CCCCCc
Q 015949 200 ELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHP---------EDEVPV 257 (397)
Q Consensus 200 ~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~---------~~~~~v 257 (397)
.+.+.+|+++|+|+.++++++.++++. ++++.+.+++++++|| +|++.... ....++
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v 88 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITV 88 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBH
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCH
Confidence 678899999999988899999999998 9999999999999999 45554321 134678
Q ss_pred ccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 258 KNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 258 ~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.++|.+++++|++++++.++++.|.+.+. ++|+|+.|...|+++..
T Consensus 89 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~ 134 (159)
T 1yav_A 89 EEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRR 134 (159)
T ss_dssp HHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHH
T ss_pred HHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHH
Confidence 88877789999999999999999998865 89999999999999984
No 38
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.97 E-value=3.4e-10 Score=95.33 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=86.8
Q ss_pred eecccceeC-ccEEEEeCCCChhHHHHHHHHhcCCCcccc------------hhhcc-cCC----CCCCCcccccccCCc
Q 015949 205 TARDAMTPA-SETFAIDVSFKLDRNLMRLVLEKGHSRVPV------------KNLLT-IHP----EDEVPVKNVSIRRIP 266 (397)
Q Consensus 205 ~V~diMtPr-~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV------------kDll~-~~~----~~~~~v~~i~~r~~~ 266 (397)
+|+++|+|+ .++.+++.++++. ++++.+.+++++++|| +|++. ... ....++.++|.++++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVA 85 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCe
Confidence 899999987 7899999999998 9999999999999999 56653 221 135678999778999
Q ss_pred EecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 267 RVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 267 ~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++++++++.++++.|++.+.+.++|+| .|...|+++..
T Consensus 86 ~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~ 123 (135)
T 2rc3_A 86 YVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIG 123 (135)
T ss_dssp CBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHH
T ss_pred EECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHH
Confidence 999999999999999999999999999 59999999884
No 39
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.97 E-value=7.4e-10 Score=94.04 Aligned_cols=98 Identities=6% Similarity=0.053 Sum_probs=84.6
Q ss_pred ceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc---h---hhcc---------cC-C--CCCCCcccccccCC
Q 015949 204 KTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV---K---NLLT---------IH-P--EDEVPVKNVSIRRI 265 (397)
Q Consensus 204 ~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV---k---Dll~---------~~-~--~~~~~v~~i~~r~~ 265 (397)
.+|+++|++ ++.+++.++++. ++++.+.+++++++|| + .+++ .. . ....++.++|.+++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~ 81 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPI 81 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCCC
Confidence 589999996 788999999998 9999999999999999 1 2333 11 1 23567899977899
Q ss_pred cEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 266 PRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 266 ~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++|+++ ++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 82 ~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~ 120 (141)
T 2rih_A 82 TVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIR 120 (141)
T ss_dssp EEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred eEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHH
Confidence 999999 999999999999999999999999999999984
No 40
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.95 E-value=4.4e-10 Score=107.10 Aligned_cols=103 Identities=14% Similarity=0.094 Sum_probs=89.6
Q ss_pred ccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-----------hhhcccCCC--------------CC
Q 015949 200 ELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-----------KNLLTIHPE--------------DE 254 (397)
Q Consensus 200 ~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-----------kDll~~~~~--------------~~ 254 (397)
.....+|+|+|++ ++.+++.++++. ++++.+.+++++++|| +|++..... ..
T Consensus 16 ~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~~~~~V~d~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~ 92 (296)
T 3ddj_A 16 YFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGIGRIIVANEKIEGLLTTRDLLSTVESYCKDSCSQGDLYHIST 92 (296)
T ss_dssp TTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGCCEEEEESSSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHT
T ss_pred hhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCCceEEEECCeEEEEEeHHHHHHHhcccccccccchhhHHHhc
Confidence 4567899999998 778999999998 9999999999999999 566554311 14
Q ss_pred CCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|.+++..+++++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 93 ~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~ 143 (296)
T 3ddj_A 93 TPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTER 143 (296)
T ss_dssp SBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred ccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Confidence 578899778899999999999999999999999999999999999999985
No 41
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.94 E-value=9.3e-10 Score=113.58 Aligned_cols=129 Identities=9% Similarity=0.098 Sum_probs=107.2
Q ss_pred cccHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCC
Q 015949 164 LFRRAELKTLVDLHGNEAGKGGELT-----RDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGH 238 (397)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~G~l~-----~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~ 238 (397)
.+|++||...+... +..|.|. +++++++.+++++ +++|+| ++++++.++++. ++++.+.++++
T Consensus 54 ~vt~~eLa~av~~~----Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARA----GGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 57889999988743 2334555 6788899888765 679997 788999999998 99999999999
Q ss_pred Ccccc-h--------------hhcccCCCCCCCccccccc-CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCccccc
Q 015949 239 SRVPV-K--------------NLLTIHPEDEVPVKNVSIR-RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPH 302 (397)
Q Consensus 239 SR~PV-k--------------Dll~~~~~~~~~v~~i~~r-~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~ 302 (397)
+++|| . |++.. ...+.++.++|.+ ++++|++++++.++++.|++.+.+.++|||++|...|++
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~-~~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGiv 200 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFI-SDYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLI 200 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHC-SCSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEE
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhh-ccCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 99999 3 34432 2346789999655 899999999999999999999999999999999999999
Q ss_pred ccc
Q 015949 303 VPI 305 (397)
Q Consensus 303 ~~~ 305 (397)
+..
T Consensus 201 t~~ 203 (491)
T 1zfj_A 201 TIK 203 (491)
T ss_dssp EHH
T ss_pred EHH
Confidence 885
No 42
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.93 E-value=4.6e-10 Score=97.07 Aligned_cols=100 Identities=9% Similarity=0.065 Sum_probs=87.8
Q ss_pred ceecccceeC----ccEEEEeCCCChhHHHHHHHHhcCCCcccc------------hhhcccCC-----CCCCCcccccc
Q 015949 204 KTARDAMTPA----SETFAIDVSFKLDRNLMRLVLEKGHSRVPV------------KNLLTIHP-----EDEVPVKNVSI 262 (397)
Q Consensus 204 ~~V~diMtPr----~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV------------kDll~~~~-----~~~~~v~~i~~ 262 (397)
++|+|+|+|+ .++.+++.++++. ++++.+.+++++++|| +|++.... ....++.++|.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 85 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMT 85 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSB
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcC
Confidence 5799999998 7889999999998 9999999999999999 56654321 13567899977
Q ss_pred cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 263 RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 263 r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++|++++++.++++.|.+.+.+.++|+| .|...|+++..
T Consensus 86 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~ 127 (157)
T 4fry_A 86 AKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIG 127 (157)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHH
T ss_pred CCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHH
Confidence 8899999999999999999999999999999 59999999984
No 43
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.92 E-value=7.8e-10 Score=93.12 Aligned_cols=102 Identities=14% Similarity=0.153 Sum_probs=87.8
Q ss_pred cccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhh-cccCC---CCCCCccccccc
Q 015949 201 LSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNL-LTIHP---EDEVPVKNVSIR 263 (397)
Q Consensus 201 l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDl-l~~~~---~~~~~v~~i~~r 263 (397)
|.+.+|+++|++ ++.+++.++++. ++++.+.+++++++|| +|+ +.... ....++.++|.+
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 81 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTK 81 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCS
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCC
Confidence 678899999987 677999999998 9999999999999999 667 55322 235678888777
Q ss_pred CCcEecCCCCHHHHHHHHHhCC-----ceEEEEEecCCCcccccccc
Q 015949 264 RIPRVSETMPLYDILNEFQKGH-----SHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 264 ~~~~Vpe~~~l~~lL~~fq~~~-----~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++++++++.++++.|.+.+ .+.++|+|+.|...|+++..
T Consensus 82 ~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~ 128 (138)
T 2p9m_A 82 DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDG 128 (138)
T ss_dssp SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHH
T ss_pred CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHH
Confidence 8999999999999999999999 99999999999999999874
No 44
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.91 E-value=1.2e-09 Score=95.11 Aligned_cols=101 Identities=15% Similarity=0.151 Sum_probs=87.1
Q ss_pred cccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccC----CCCCCCccccccc
Q 015949 201 LSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIH----PEDEVPVKNVSIR 263 (397)
Q Consensus 201 l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~----~~~~~~v~~i~~r 263 (397)
|.+.+|+++|++ . ++++.++++. ++++.+.+++++++|| +|++... .....++.++|.+
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 89 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTR 89 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcC
Confidence 567899999996 3 4999999998 9999999999999999 5665531 1235679999666
Q ss_pred --CCcEecCCCCHHHHHHHHHhCCceEEEEEecCC---Ccccccccc
Q 015949 264 --RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQN---DREQPHVPI 305 (397)
Q Consensus 264 --~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG---~~~g~~~~~ 305 (397)
++++|++++++.++++.|++.+.+.++|+|+.| ...|+++..
T Consensus 90 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~ 136 (159)
T 3fv6_A 90 MPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKT 136 (159)
T ss_dssp TTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHH
T ss_pred CCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHH
Confidence 889999999999999999999999999999998 899999984
No 45
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.91 E-value=3.3e-09 Score=99.89 Aligned_cols=101 Identities=18% Similarity=0.145 Sum_probs=83.0
Q ss_pred ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcc-cCCC----CCCCccccccc
Q 015949 202 SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLT-IHPE----DEVPVKNVSIR 263 (397)
Q Consensus 202 ~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~-~~~~----~~~~v~~i~~r 263 (397)
.+.+++++|+| ++.+++.++++. ++++.+.+++++++|| +|++. ...+ ...+++++|.+
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~ 134 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQR 134 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBS
T ss_pred ccCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCC
Confidence 46789999997 467999999998 9999999999999999 56665 4332 24578888767
Q ss_pred CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 264 RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 264 ~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++.+++++++.++++.|.+++.+.++|+|++|...|+++..
T Consensus 135 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~ 176 (282)
T 2yzq_A 135 YVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDET 176 (282)
T ss_dssp CCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGG
T ss_pred CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHH
Confidence 899999999999999999999999999999999999999974
No 46
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.90 E-value=2.9e-10 Score=117.54 Aligned_cols=127 Identities=13% Similarity=0.158 Sum_probs=24.5
Q ss_pred cccHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCC
Q 015949 164 LFRRAELKTLVDLHGNEAGKGGELT-----RDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGH 238 (397)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~G~l~-----~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~ 238 (397)
.++++|+...+... +..|.+. +++++++.+++++++ +|++ ++++++.+++++ ++++.+.+++|
T Consensus 57 ~vt~~ela~ava~~----GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMARE----GGLGVIHRNMGIEEQVEQVKRVKRAER-----LIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhc----CCceeecCCCCHHHHHHHHHhhcchhh-----cccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 56889998888632 2234453 577899999988754 6884 889999999998 99999999999
Q ss_pred Ccccc------------hhhcccCCCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 239 SRVPV------------KNLLTIHPEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 239 SR~PV------------kDll~~~~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++|| +|++. ....++.++|.+++++|++++++.++++.|++.+.+.++|||++|...|+++..
T Consensus 125 ~~~pVvd~~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~ 200 (486)
T 2cu0_A 125 DGLPVVEDEKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMS 200 (486)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred cEEEEEECCEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHH
Confidence 99999 34443 235678898666899999999999999999999999999999999999999986
No 47
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.89 E-value=9.1e-10 Score=103.73 Aligned_cols=96 Identities=19% Similarity=0.149 Sum_probs=66.6
Q ss_pred eecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCCCCCCcccccccCCcEecCC
Q 015949 205 TARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPEDEVPVKNVSIRRIPRVSET 271 (397)
Q Consensus 205 ~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~~~~~v~~i~~r~~~~Vpe~ 271 (397)
+|+++|++ ++++++.++++. ++++.+.+++++++|| +|++... ...+++++|.+++++++++
T Consensus 2 ~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~--~~~~v~~~m~~~~~~v~~~ 76 (282)
T 2yzq_A 2 RVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNP--DEEQLAMLVKRDVPVVKEN 76 (282)
T ss_dssp BHHHHSEE--SCCCEESSCC-------------CCEEEEECTTCCEEEEEESSCC------------CCCBSCCCEEETT
T ss_pred chHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhh--ccCCHHHHcCCCCcEECCC
Confidence 68999995 677999999998 9999999999999999 3333221 2457888866678999999
Q ss_pred CCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 272 MPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 272 ~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 77 ~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~ 110 (282)
T 2yzq_A 77 DTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVG 110 (282)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred CcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHH
Confidence 9999999999999999999999999999999884
No 48
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.87 E-value=1.7e-09 Score=93.75 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=87.4
Q ss_pred ccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCc-ccc------------hhhcccC----------------
Q 015949 200 ELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSR-VPV------------KNLLTIH---------------- 250 (397)
Q Consensus 200 ~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR-~PV------------kDll~~~---------------- 250 (397)
.+...+|+++|++ ++.+++.++++. ++++.+.++++++ +|| +|++...
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~ 88 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHFFGFIPKEELIRS 88 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHHHCCCC-------
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhHHhhhccHHHHHH
Confidence 3577899999997 788999999998 9999999999999 999 4555421
Q ss_pred ---CCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 251 ---PEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 251 ---~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.....++.++|.+ +++|++++++.++++.|.+.+.+..+|+|+.|...|+++..
T Consensus 89 ~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~ 145 (157)
T 1o50_A 89 SMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSL 145 (157)
T ss_dssp CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred HHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHH
Confidence 1235678888656 99999999999999999999999999999999999999884
No 49
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.87 E-value=9e-10 Score=92.30 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=85.0
Q ss_pred cccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhc-ccCCC----CCCCcccccc
Q 015949 201 LSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLL-TIHPE----DEVPVKNVSI 262 (397)
Q Consensus 201 l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll-~~~~~----~~~~v~~i~~ 262 (397)
+.-.+|+++|++ ++.+++.++++. ++++.+.+++++++|| +|++ ..... ...++.++|.
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 455789999997 677999999998 9999999999999999 5665 22211 2467888877
Q ss_pred cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 263 RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 263 r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++++++++++++.++++.|.+.+.+.++|+|+ |...|+++..
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~ 123 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEA 123 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHH
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHH
Confidence 88999999999999999999999999999999 9999999874
No 50
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.87 E-value=8.1e-10 Score=91.29 Aligned_cols=97 Identities=18% Similarity=0.188 Sum_probs=83.9
Q ss_pred eecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc------------hhhcccCC----CCCCCcccccccCCcEe
Q 015949 205 TARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV------------KNLLTIHP----EDEVPVKNVSIRRIPRV 268 (397)
Q Consensus 205 ~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV------------kDll~~~~----~~~~~v~~i~~r~~~~V 268 (397)
+|+++|++ ++.+++.++++. ++++.+.+++++++|| +|++.... ....++.++|.++++++
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVTI 78 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGEE
T ss_pred CHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeEE
Confidence 68999997 677999999998 9999999999999999 45554311 13567888877889999
Q ss_pred cCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 269 SETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 269 pe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++++++.++++.|.+.+.+.++|+|+ |...|+++..
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~ 114 (125)
T 1pbj_A 79 SPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISAT 114 (125)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHH
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHH
Confidence 99999999999999999999999999 9999999874
No 51
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.86 E-value=2e-09 Score=111.97 Aligned_cols=130 Identities=11% Similarity=0.107 Sum_probs=101.5
Q ss_pred ccccHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcC
Q 015949 163 ALFRRAELKTLVDLHGNEAGKGGELT-----RDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKG 237 (397)
Q Consensus 163 ~~~s~eEL~~lv~~~~~e~~~~G~l~-----~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g 237 (397)
+.+|++++...+...+ .-|.|. +++.+++..+.. +++.|++ ++++++.++++. ++++.+.+++
T Consensus 76 dtvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~ 143 (511)
T 3usb_A 76 DTVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYR 143 (511)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHC
T ss_pred hhhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcC
Confidence 4578999987776322 123332 444556666654 4466765 678999999998 9999999999
Q ss_pred CCcccc-h--------------hhcccCCCCCCCccccccc-CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccc
Q 015949 238 HSRVPV-K--------------NLLTIHPEDEVPVKNVSIR-RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQP 301 (397)
Q Consensus 238 ~SR~PV-k--------------Dll~~~~~~~~~v~~i~~r-~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~ 301 (397)
||++|| + |++. ......+++++|.+ ++++|++++++.++++.|++.+.+.++|||++|...|+
T Consensus 144 ~s~~pVvd~g~~~~lvGiVt~rDl~~-~~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~Gi 222 (511)
T 3usb_A 144 ISGVPVVNNLDERKLVGIITNRDMRF-IQDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGL 222 (511)
T ss_dssp CSEEEEESCTTTCBEEEEEEHHHHTT-CCCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred CcEEEEEecCCCCEEEEEEEehHhhh-hccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeee
Confidence 999999 2 3332 12345789999665 89999999999999999999999999999999999999
Q ss_pred cccc
Q 015949 302 HVPI 305 (397)
Q Consensus 302 ~~~~ 305 (397)
++..
T Consensus 223 IT~~ 226 (511)
T 3usb_A 223 ITIK 226 (511)
T ss_dssp EEHH
T ss_pred ccHH
Confidence 9875
No 52
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.85 E-value=1.3e-09 Score=94.92 Aligned_cols=100 Identities=18% Similarity=0.116 Sum_probs=85.8
Q ss_pred ccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccC------------CCCCCC
Q 015949 202 SEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIH------------PEDEVP 256 (397)
Q Consensus 202 ~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~------------~~~~~~ 256 (397)
...+|+++|++ ++++++.++++. ++++.+.+++++++|| +|++... .....+
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~ 79 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETP 79 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCB
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccC
Confidence 45789999997 677999999998 9999999999999999 4555321 123567
Q ss_pred cccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 257 VKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 257 v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.++|.+++++|++++++.++++.|.+.+.+.++|+|+ |...|+++..
T Consensus 80 v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~ 127 (160)
T 2o16_A 80 LFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDS 127 (160)
T ss_dssp HHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHH
T ss_pred HHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHH
Confidence 88887778899999999999999999999999999999 9999999984
No 53
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.85 E-value=1.2e-09 Score=96.47 Aligned_cols=103 Identities=16% Similarity=0.196 Sum_probs=86.6
Q ss_pred cccceecccceeCcc--EEEE--eCCCChhHHHHHHHHhcCCCcccc---------------hhhcccC-----------
Q 015949 201 LSEKTARDAMTPASE--TFAI--DVSFKLDRNLMRLVLEKGHSRVPV---------------KNLLTIH----------- 250 (397)
Q Consensus 201 l~~~~V~diMtPr~~--v~~L--~~~~tl~~e~l~~i~~~g~SR~PV---------------kDll~~~----------- 250 (397)
+.+.+|+|+|+|..+ ++++ +.++++. ++++.+.+++++++|| +|++...
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 368899999999754 6777 9999998 9999999999999999 3343321
Q ss_pred -----------------CCCCCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 251 -----------------PEDEVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 251 -----------------~~~~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.....++.++|.+++++|++++++.++++.|.+.+.+.++|+| .|...|+++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~ 157 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKK 157 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHH
Confidence 0134578888668999999999999999999999999999999 79999999984
No 54
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.80 E-value=1e-09 Score=113.89 Aligned_cols=130 Identities=8% Similarity=0.080 Sum_probs=21.1
Q ss_pred ccccHHHHHHHHHhhccccccCCCC----C-HHHHHHHHHhhccccceeccc-ceeCccEEEEeCCCChhHHHHHHHHhc
Q 015949 163 ALFRRAELKTLVDLHGNEAGKGGEL----T-RDETTIITGALELSEKTARDA-MTPASETFAIDVSFKLDRNLMRLVLEK 236 (397)
Q Consensus 163 ~~~s~eEL~~lv~~~~~e~~~~G~l----~-~~E~~ii~~~l~l~~~~V~di-MtPr~~v~~L~~~~tl~~e~l~~i~~~ 236 (397)
..++++++...+...+ ..|.| + +++++++.++.. .++ |+| ++++++.++++. ++++.+.++
T Consensus 60 ~~vt~~~la~~la~~g----g~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~ 126 (503)
T 1me8_A 60 QSVSGEKMAIALAREG----GISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRT 126 (503)
T ss_dssp TTTCSHHHHHHHHHTT----CEEEECCSSCHHHHHHHHHHHHT------TTC----------------------------
T ss_pred hhhhHHHHHHHHHhCC----CcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHc
Confidence 3568899987776321 11222 2 466777766554 456 998 888999999998 999999999
Q ss_pred CCCcccc--h-----hhccc---------CCCCCCCcccccccC--CcEecCCCCHHHHHHHHHhCCceEEEEEecCCCc
Q 015949 237 GHSRVPV--K-----NLLTI---------HPEDEVPVKNVSIRR--IPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDR 298 (397)
Q Consensus 237 g~SR~PV--k-----Dll~~---------~~~~~~~v~~i~~r~--~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~ 298 (397)
+|+++|| . .++++ ......+++++|.++ +++|++++++.++++.|++++.+.++|||++|..
T Consensus 127 ~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~l 206 (503)
T 1me8_A 127 THNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHL 206 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeE
Confidence 9999999 2 13221 112346788986555 9999999999999999999999999999999999
Q ss_pred ccccccc
Q 015949 299 EQPHVPI 305 (397)
Q Consensus 299 ~g~~~~~ 305 (397)
.|+++..
T Consensus 207 vGiIT~~ 213 (503)
T 1me8_A 207 RYIVFRK 213 (503)
T ss_dssp -------
T ss_pred EEEEEec
Confidence 9999985
No 55
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.79 E-value=9.4e-10 Score=113.91 Aligned_cols=130 Identities=17% Similarity=0.211 Sum_probs=24.6
Q ss_pred ccccHHHHHHHHHhhccccccCCCCC-----HHHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcC
Q 015949 163 ALFRRAELKTLVDLHGNEAGKGGELT-----RDETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKG 237 (397)
Q Consensus 163 ~~~s~eEL~~lv~~~~~e~~~~G~l~-----~~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g 237 (397)
..+|++++...+...+ .-|.|. +++.+++.++ ++++++|++ +.++++.++++. ++++++.+++
T Consensus 51 ~tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHH-----HHCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 4578999998876432 234444 5667777777 457889985 678999999998 9999999999
Q ss_pred CCcccc------------hhhcccCCCCCCCcccccc-c-CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccc
Q 015949 238 HSRVPV------------KNLLTIHPEDEVPVKNVSI-R-RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHV 303 (397)
Q Consensus 238 ~SR~PV------------kDll~~~~~~~~~v~~i~~-r-~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~ 303 (397)
|+++|| +|+... .....++.++|. + +++++++++++.++++.|++++.+.++|||++|...|+++
T Consensus 119 ~s~~pVvd~g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT 197 (490)
T 4avf_A 119 FSGFPVVEQGELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVT 197 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEECCEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEe
Confidence 999999 444322 223567999954 3 6999999999999999999999999999999999999999
Q ss_pred cc
Q 015949 304 PI 305 (397)
Q Consensus 304 ~~ 305 (397)
..
T Consensus 198 ~~ 199 (490)
T 4avf_A 198 FR 199 (490)
T ss_dssp --
T ss_pred hH
Confidence 85
No 56
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.78 E-value=2e-09 Score=90.97 Aligned_cols=103 Identities=13% Similarity=0.157 Sum_probs=84.0
Q ss_pred ccccceecc---cceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCC-----CCCCCcc
Q 015949 200 ELSEKTARD---AMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHP-----EDEVPVK 258 (397)
Q Consensus 200 ~l~~~~V~d---iMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~-----~~~~~v~ 258 (397)
++-++++++ +|+ .++++++.++++. ++++.+.+++++++|| +|++.... ....++.
T Consensus 4 ~~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred chhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 345678888 776 4788999999998 9999999999999999 45544221 1245788
Q ss_pred ccccc------CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 259 NVSIR------RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 259 ~i~~r------~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++|.+ ++++|++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~ 133 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLS 133 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHH
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHH
Confidence 87555 689999999999999999999999999999999999999884
No 57
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.73 E-value=5.9e-09 Score=89.80 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=84.7
Q ss_pred ccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCC-----CCCCCccccc
Q 015949 200 ELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHP-----EDEVPVKNVS 261 (397)
Q Consensus 200 ~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~-----~~~~~v~~i~ 261 (397)
.+++.+|+++ .++.+++.++++. ++++.+.+++++.+|| +|++.... ....++.++|
T Consensus 19 ~l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 19 SLEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp BHHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred hHHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 3466788887 4778999999998 9999999999999999 45554321 1245788885
Q ss_pred c------cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 262 I------RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 262 ~------r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
. +++++|++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~ 143 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLS 143 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHH
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHH
Confidence 3 7899999999999999999999999999999999999999874
No 58
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.68 E-value=3.3e-08 Score=90.63 Aligned_cols=97 Identities=13% Similarity=0.019 Sum_probs=84.3
Q ss_pred ceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCCCCCCcccccccCCcEecC
Q 015949 204 KTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPEDEVPVKNVSIRRIPRVSE 270 (397)
Q Consensus 204 ~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~~~~~v~~i~~r~~~~Vpe 270 (397)
-+++++|++ ++++++.++++. ++++.+.+++++++|| +|++.... ..+++++|.++++++++
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v~~ 87 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFVHE 87 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCEET
T ss_pred cCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEECC
Confidence 467888886 677999999998 9999999999999999 44443322 45799997788999999
Q ss_pred CCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 271 TMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 271 ~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 88 ~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~ 122 (213)
T 1vr9_A 88 EDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLH 122 (213)
T ss_dssp TSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHH
T ss_pred CCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHH
Confidence 99999999999999999999999999999999985
No 59
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.67 E-value=7.6e-09 Score=89.41 Aligned_cols=107 Identities=9% Similarity=0.081 Sum_probs=83.3
Q ss_pred HHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-h--------------hhcccCCC-------
Q 015949 195 ITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-K--------------NLLTIHPE------- 252 (397)
Q Consensus 195 i~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-k--------------Dll~~~~~------- 252 (397)
..+.+.+.+.+|+|+|++ ++++++.++++. ++++.+.+++++++|| . |++.....
T Consensus 4 ~~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~ 80 (164)
T 2pfi_A 4 LGRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAP 80 (164)
T ss_dssp ------CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------
T ss_pred ccccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCC
Confidence 345567889999999998 677999999998 9999999999999999 2 23221111
Q ss_pred -CCCCcccccccC------CcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 253 -DEVPVKNVSIRR------IPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 253 -~~~~v~~i~~r~------~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
...++.++|.++ +++|++++++.++++.|.+.+.+.++|+| .|...|+++..
T Consensus 81 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~ 139 (164)
T 2pfi_A 81 GHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWV 139 (164)
T ss_dssp CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHH
T ss_pred cccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHH
Confidence 124577775444 78999999999999999999999999999 59999999984
No 60
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.49 E-value=6.3e-08 Score=93.19 Aligned_cols=103 Identities=13% Similarity=0.144 Sum_probs=86.7
Q ss_pred ccccceeccc---ceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC-----CCCCcc
Q 015949 200 ELSEKTARDA---MTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE-----DEVPVK 258 (397)
Q Consensus 200 ~l~~~~V~di---MtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~-----~~~~v~ 258 (397)
.+.+.+++++ |+ .++++++.++++. ++++.+.+++++++|| +|++....+ ...++.
T Consensus 183 ~~~~~~v~~~~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~ 259 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVG 259 (323)
T ss_dssp GGCCSBGGGTTCSBC--TTCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHH
T ss_pred hhhhCcHHHcCCCCC--CCcEEECCCCcHH-HHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHH
Confidence 3566799999 65 4778999999998 9999999999999999 555543211 245788
Q ss_pred ccccc------CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 259 NVSIR------RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 259 ~i~~r------~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++|.+ +++++++++++.++++.|.+.+.|.++|+|++|...|+++..
T Consensus 260 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~ 312 (323)
T 3t4n_C 260 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLS 312 (323)
T ss_dssp HHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHH
T ss_pred HHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHH
Confidence 88655 689999999999999999999999999999999999999874
No 61
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.49 E-value=5.7e-08 Score=101.22 Aligned_cols=100 Identities=13% Similarity=0.160 Sum_probs=84.8
Q ss_pred cccceecccceeCccEEEEeCC-CChhHHHHHHHHhcCCCcccc--------------hhhccc----CCCCCCCccccc
Q 015949 201 LSEKTARDAMTPASETFAIDVS-FKLDRNLMRLVLEKGHSRVPV--------------KNLLTI----HPEDEVPVKNVS 261 (397)
Q Consensus 201 l~~~~V~diMtPr~~v~~L~~~-~tl~~e~l~~i~~~g~SR~PV--------------kDll~~----~~~~~~~v~~i~ 261 (397)
+.+.+|+|+|++ ++++++.+ +++. ++++.+.+++++++|| +|++.. ......++.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 557899999996 67799999 9998 9999999999999999 455532 122357899998
Q ss_pred ccCCcEecCCCCHHHHHHHHHhCCceEEEEEec----CCCcccccccc
Q 015949 262 IRRIPRVSETMPLYDILNEFQKGHSHMAVVVRH----QNDREQPHVPI 305 (397)
Q Consensus 262 ~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDE----yG~~~g~~~~~ 305 (397)
.+++++|++++++.++++.|++.+ +++|||+ +|...|+++..
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~ 503 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKL 503 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHH
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHH
Confidence 799999999999999999997654 5799999 69999999984
No 62
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.45 E-value=8e-08 Score=89.39 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=46.3
Q ss_pred CCcccccc-cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSI-RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~-r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|. +++.++++++++.++++.|++.+.+..+|+|+.|...|+++..
T Consensus 185 ~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~ 236 (245)
T 3l2b_A 185 LPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARF 236 (245)
T ss_dssp SBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC
T ss_pred CceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHH
Confidence 34667766 7999999999999999999999999999999999999999984
No 63
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.30 E-value=4.2e-07 Score=87.77 Aligned_cols=101 Identities=14% Similarity=0.169 Sum_probs=84.7
Q ss_pred ccceecc---cceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC-----CCCCcccc
Q 015949 202 SEKTARD---AMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE-----DEVPVKNV 260 (397)
Q Consensus 202 ~~~~V~d---iMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~-----~~~~v~~i 260 (397)
...++++ +|++ ++.+++.++++. ++++.+.+++++++|| +|++....+ ...++.++
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~ 256 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEA 256 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHH
Confidence 4678899 4774 677999999998 9999999999999999 455543211 24567787
Q ss_pred cc------cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 261 SI------RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 261 ~~------r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
|. +++++|++++++.++++.|.+.+.+.++|+|++|...|+++..
T Consensus 257 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~ 307 (334)
T 2qrd_G 257 LLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLA 307 (334)
T ss_dssp HTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHH
T ss_pred HhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHH
Confidence 55 3789999999999999999999999999999999999999984
No 64
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.24 E-value=8.6e-07 Score=85.57 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=83.5
Q ss_pred cceeccc--ceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC-----CCCCccccc-
Q 015949 203 EKTARDA--MTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE-----DEVPVKNVS- 261 (397)
Q Consensus 203 ~~~V~di--MtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~-----~~~~v~~i~- 261 (397)
..+++++ |+ ..++++++.++++. ++++.+.+++++++|| +|++..... ...++.++|
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~ 266 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQ 266 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHh
Confidence 3556666 44 25788999999998 9999999999999999 566654321 145677774
Q ss_pred -----ccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 262 -----IRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 262 -----~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 267 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~ 315 (330)
T 2v8q_E 267 HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLS 315 (330)
T ss_dssp GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHH
T ss_pred ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHH
Confidence 37899999999999999999999999999999999999999984
No 65
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.24 E-value=7.8e-07 Score=73.94 Aligned_cols=51 Identities=10% Similarity=-0.069 Sum_probs=47.6
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.++++.+++++++.++++.|++.+.+.++|+|+ |...|+++..
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~ 54 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLS 54 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHH
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHH
Confidence 46789998899999999999999999999999999999999 9999999885
No 66
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.16 E-value=7.6e-07 Score=74.35 Aligned_cols=52 Identities=13% Similarity=0.141 Sum_probs=45.9
Q ss_pred CCCcccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEecC-CCcccccccc
Q 015949 254 EVPVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ-NDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy-G~~~g~~~~~ 305 (397)
+.+++++|. ++++.+++++++.++++.|++++.+..+|+|+. |...|+++..
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~ 58 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAK 58 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGG
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHH
Confidence 456788865 567899999999999999999999999999986 9999999985
No 67
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.15 E-value=4.1e-07 Score=93.93 Aligned_cols=110 Identities=11% Similarity=0.113 Sum_probs=7.3
Q ss_pred CCHHH-HHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-------------hhhcccCCC
Q 015949 187 LTRDE-TTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-------------KNLLTIHPE 252 (397)
Q Consensus 187 l~~~E-~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-------------kDll~~~~~ 252 (397)
++.++ ++.+..+. +++++|++ ++++++.++++. ++++.+.+++++.+|| +|++.. ..
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~-~~ 152 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFE-KN 152 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhh-cC
Confidence 44433 45555554 46789997 788999999998 9999999999999999 334321 12
Q ss_pred CCCCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 253 DEVPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 253 ~~~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
...++.++|.+ ++++|++++++.++++.|++.+.+..+|||+.|...|+++..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~ 207 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIK 207 (494)
T ss_dssp -------------------------------------------------------
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHH
Confidence 34678899665 899999999999999999999999999999999999999985
No 68
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.09 E-value=7.3e-07 Score=78.17 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=48.3
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.+++++|.+++..|++++++.++++.|++++.+-++|+|+.|...|+++..
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~ 68 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITES 68 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGG
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHH
Confidence 4578889888999999999999999999999999999999999999999874
No 69
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.09 E-value=3e-06 Score=73.84 Aligned_cols=50 Identities=6% Similarity=-0.123 Sum_probs=43.2
Q ss_pred Ccccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 256 PVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.++++|. .++..|+++.++.++++.|.+++....+|+|+.|...|+++..
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~ 67 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLR 67 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHH
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEec
Confidence 3566643 4689999999999999999999999999999999999999874
No 70
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.08 E-value=2e-06 Score=73.28 Aligned_cols=52 Identities=13% Similarity=0.045 Sum_probs=47.0
Q ss_pred CCCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecC-CCcccccccc
Q 015949 254 EVPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ-NDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy-G~~~g~~~~~ 305 (397)
..+++++|.+ +++.+++++++.++++.|++.+.+..+|+|+. |...|+++..
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~ 76 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIR 76 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHH
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHH
Confidence 4678899766 78999999999999999999999999999998 8999999984
No 71
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.05 E-value=1.6e-06 Score=70.95 Aligned_cols=50 Identities=8% Similarity=0.020 Sum_probs=45.9
Q ss_pred CcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 256 PVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++|.++++.+++++++.++++.|++++.+.++|+|+.|...|+++..
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~ 51 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSW 51 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHH
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHH
Confidence 46778778899999999999999999999999999999999999999984
No 72
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.03 E-value=1.2e-06 Score=72.74 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=45.0
Q ss_pred CCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecC-CCcccccccc
Q 015949 255 VPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ-NDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy-G~~~g~~~~~ 305 (397)
.+++++|.+ +++.+++++++.++++.|++++.+.++|+|+. |...|+++..
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~ 56 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAK 56 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGG
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHH
Confidence 457788653 38899999999999999999999999999998 8999999985
No 73
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.00 E-value=5.9e-06 Score=78.10 Aligned_cols=44 Identities=11% Similarity=-0.146 Sum_probs=39.5
Q ss_pred cccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 261 SIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 261 ~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
|-..|+.|.+++++.++...|++.+.+.++|++ .|...|+++..
T Consensus 195 md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrk 238 (250)
T 2d4z_A 195 IDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALA 238 (250)
T ss_dssp EECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHH
T ss_pred ccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHH
Confidence 345677899999999999999999999999998 59999999984
No 74
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.99 E-value=1.7e-06 Score=72.14 Aligned_cols=52 Identities=21% Similarity=0.248 Sum_probs=43.7
Q ss_pred CCCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecC-CCcccccccc
Q 015949 254 EVPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ-NDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy-G~~~g~~~~~ 305 (397)
..+++++|.+ ++.++++++++.++++.|++++.+..+|+|+. |...|+++..
T Consensus 5 ~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~ 59 (130)
T 3i8n_A 5 DVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRL 59 (130)
T ss_dssp --CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHH
T ss_pred cCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHH
Confidence 3568888653 35589999999999999999999999999987 9999999984
No 75
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.99 E-value=3.4e-06 Score=74.20 Aligned_cols=53 Identities=17% Similarity=0.150 Sum_probs=45.8
Q ss_pred CCCCcccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEecC-CCcccccccc
Q 015949 253 DEVPVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ-NDREQPHVPI 305 (397)
Q Consensus 253 ~~~~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy-G~~~g~~~~~ 305 (397)
...+++++|. ++++.+++++++.++++.|++.+...++|+|+. |...|+++..
T Consensus 40 ~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~ 95 (172)
T 3lhh_A 40 DERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAK 95 (172)
T ss_dssp ---CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHH
T ss_pred CCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHH
Confidence 3467889976 678899999999999999999999999999998 9999999884
No 76
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.97 E-value=7.2e-06 Score=74.81 Aligned_cols=52 Identities=8% Similarity=0.017 Sum_probs=46.5
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhC---CceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKG---HSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~---~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+..++++|.++++.|++++++.++++.|++. +.+..+|+|+.|...|+++..
T Consensus 53 ~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~ 107 (205)
T 3kxr_A 53 ENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRY 107 (205)
T ss_dssp TTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHH
T ss_pred cchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHH
Confidence 3468888878899999999999999999997 788999999999999999874
No 77
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.96 E-value=6.2e-06 Score=73.04 Aligned_cols=52 Identities=10% Similarity=0.048 Sum_probs=45.6
Q ss_pred CCCcccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEecC-CCcccccccc
Q 015949 254 EVPVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ-NDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy-G~~~g~~~~~ 305 (397)
..+++++|. +++++|++++++.++++.|++.+....+|+|+. |...|+++..
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~ 89 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAK 89 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHH
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHH
Confidence 456888863 468899999999999999999999999999986 8999999984
No 78
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.95 E-value=1.8e-06 Score=72.84 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=45.1
Q ss_pred CCcccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEecC-CCcccccccc
Q 015949 255 VPVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ-NDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy-G~~~g~~~~~ 305 (397)
.+++++|. +++..+++++++.++++.|++.+.+..+|+|+. |...|+++..
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~ 56 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAK 56 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGG
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHH
Confidence 45778865 567999999999999999999999999999998 8999999985
No 79
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.90 E-value=1.1e-05 Score=69.11 Aligned_cols=51 Identities=6% Similarity=-0.142 Sum_probs=45.1
Q ss_pred CCcccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|. ++++.|++++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~ 67 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLR 67 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHH
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHH
Confidence 35788865 6789999999999999999999999999999999999999884
No 80
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.85 E-value=2.2e-05 Score=65.17 Aligned_cols=51 Identities=20% Similarity=0.115 Sum_probs=45.6
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.+++++|.++++.+++++++.++++.|++.+.+.++|+| .|...|+++..
T Consensus 3 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~ 53 (133)
T 2ef7_A 3 EEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITER 53 (133)
T ss_dssp CCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHH
T ss_pred cccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHH
Confidence 3568888777899999999999999999999999999999 78899999884
No 81
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.81 E-value=2.8e-06 Score=71.09 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=43.2
Q ss_pred Ccccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEec-CCCcccccccc
Q 015949 256 PVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRH-QNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDE-yG~~~g~~~~~ 305 (397)
+++++|. ++++.+++++++.++++.|++++.+..+|+|+ .|...|+++..
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~ 55 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVR 55 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHH
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHH
Confidence 4677753 46889999999999999999999999999975 68999999874
No 82
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.80 E-value=5.5e-06 Score=70.01 Aligned_cols=52 Identities=10% Similarity=-0.035 Sum_probs=46.7
Q ss_pred CCCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.+ +++.+++++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~ 57 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDY 57 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHH
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHH
Confidence 3568888655 689999999999999999999999999999999999999975
No 83
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.79 E-value=3e-06 Score=87.95 Aligned_cols=99 Identities=11% Similarity=0.191 Sum_probs=54.6
Q ss_pred ceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc--h-----hhccc---------CC-CCCCCccccccc--C
Q 015949 204 KTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV--K-----NLLTI---------HP-EDEVPVKNVSIR--R 264 (397)
Q Consensus 204 ~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV--k-----Dll~~---------~~-~~~~~v~~i~~r--~ 264 (397)
++++++|++ +.++++.++++. ++++.+.+++++++|| + .++++ .. ....++.++|.+ +
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~ 184 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIE 184 (514)
T ss_dssp HTCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBC
T ss_pred hhhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCC
Confidence 478899996 567899999998 9999999999999999 2 12221 10 234678888666 7
Q ss_pred CcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 265 IPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 265 ~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++|++++++.++++.|++.+.+..+|||+.|...|+++..
T Consensus 185 ~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~ 225 (514)
T 1jcn_A 185 LVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIART 225 (514)
T ss_dssp CCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CC
T ss_pred CeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHH
Confidence 99999999999999999999999999999999999999975
No 84
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.78 E-value=1.4e-05 Score=67.35 Aligned_cols=51 Identities=16% Similarity=0.166 Sum_probs=46.3
Q ss_pred CCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCC--Ccccccccc
Q 015949 255 VPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQN--DREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG--~~~g~~~~~ 305 (397)
.+++++|.++++.+++++++.++++.|++.+.+.++|+|+.| ...|+++..
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~ 57 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSER 57 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHH
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHH
Confidence 467888778899999999999999999999999999999988 899999874
No 85
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.76 E-value=6.3e-06 Score=68.83 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=47.1
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.++++.+++++++.++++.|++++.+.++|+|+.|...|+++..
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~ 58 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTT 58 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHH
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHH
Confidence 4568888768899999999999999999999999999999989999999874
No 86
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.72 E-value=6.7e-05 Score=62.53 Aligned_cols=52 Identities=10% Similarity=0.075 Sum_probs=47.3
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.++++.+++++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~ 57 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKS 57 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Confidence 3568888778899999999999999999999999999999989999999874
No 87
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.72 E-value=7.8e-06 Score=70.15 Aligned_cols=51 Identities=10% Similarity=0.004 Sum_probs=44.0
Q ss_pred CCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEE-ec-CCCcccccccc
Q 015949 255 VPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVV-RH-QNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVV-DE-yG~~~g~~~~~ 305 (397)
.+++++|.+ +++.+++++++.++++.|++++.+.++|+ |+ .|...|+++..
T Consensus 20 ~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~ 74 (153)
T 3oco_A 20 KVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNY 74 (153)
T ss_dssp CBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHH
T ss_pred CEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHH
Confidence 467888653 78999999999999999999999999999 64 58999999884
No 88
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.69 E-value=5.3e-05 Score=64.66 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=43.8
Q ss_pred CCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.++.++ ++++.+++++++.++++.|++++...++|+|+.|...|+++..
T Consensus 23 ~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~ 71 (152)
T 2uv4_A 23 LQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKF 71 (152)
T ss_dssp HTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHH
T ss_pred ccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHH
Confidence 345655 7889999999999999999999999999999989999999885
No 89
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.69 E-value=1.1e-05 Score=68.51 Aligned_cols=51 Identities=16% Similarity=0.040 Sum_probs=45.7
Q ss_pred CCcccccc--cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSI--RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~--r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|. ++++.+++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 15 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~ 67 (150)
T 3lqn_A 15 IFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTA 67 (150)
T ss_dssp CBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHH
T ss_pred CChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHH
Confidence 46778865 4589999999999999999999999999999999999999985
No 90
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.68 E-value=5.2e-05 Score=67.02 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=46.8
Q ss_pred CCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|.++++++++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~ 59 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSER 59 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHH
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Confidence 468888778899999999999999999999999999999889999999884
No 91
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.67 E-value=5.2e-05 Score=63.08 Aligned_cols=49 Identities=6% Similarity=0.116 Sum_probs=44.1
Q ss_pred Ccccccc---cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 256 PVKNVSI---RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~---r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++|. ++++.+++++++.++++.|++++.+.++|+| .|...|+++..
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~ 58 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTER 58 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHH
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehH
Confidence 5778866 7899999999999999999999999999999 78899999874
No 92
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.65 E-value=2.1e-05 Score=67.79 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=45.5
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++| ++++.|++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 16 ~~~v~~im-~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~ 66 (159)
T 3fv6_A 16 KLQVKDFQ-SIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRK 66 (159)
T ss_dssp TCBGGGSC-BCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred hCCHHHHc-CCCEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHH
Confidence 35688885 5567999999999999999999999999999999999999984
No 93
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.64 E-value=1.8e-05 Score=67.57 Aligned_cols=52 Identities=15% Similarity=0.024 Sum_probs=46.7
Q ss_pred CCCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.+ +++.++++.++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~ 63 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMT 63 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHH
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHH
Confidence 4568888654 889999999999999999999999999999999999999884
No 94
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.64 E-value=3.2e-05 Score=64.65 Aligned_cols=51 Identities=10% Similarity=0.249 Sum_probs=45.0
Q ss_pred CCccc---ccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKN---VSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~---i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.++++ +|.++++.+++++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~ 61 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAY 61 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHH
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHH
Confidence 34555 6568899999999999999999999999999999989999999884
No 95
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.63 E-value=1.2e-05 Score=69.34 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=45.8
Q ss_pred CCCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecCC-Ccccccccc
Q 015949 254 EVPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQN-DREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG-~~~g~~~~~ 305 (397)
..+++++|.+ +++.+++++++.++++.|++.+.+..+|+|+.| ...|+++..
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~ 91 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAK 91 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGG
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHH
Confidence 4678898654 689999999999999999999999999999885 899999985
No 96
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.63 E-value=4.4e-05 Score=66.18 Aligned_cols=52 Identities=12% Similarity=0.018 Sum_probs=46.2
Q ss_pred CCCccccccc---CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIR---RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r---~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.+ +++.|++++++.++++.|.+.+.+.++|+|+.|...|+++..
T Consensus 23 ~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~ 77 (165)
T 3fhm_A 23 ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTER 77 (165)
T ss_dssp SCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred hcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHH
Confidence 3568888542 699999999999999999999999999999999999999884
No 97
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.62 E-value=1.3e-05 Score=69.93 Aligned_cols=51 Identities=10% Similarity=-0.025 Sum_probs=45.9
Q ss_pred CCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|.+ +++.|++++++.++++.|++++.+.++|+|+.|...|+++..
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~ 56 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDY 56 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHH
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHH
Confidence 457788655 699999999999999999999999999999999999999985
No 98
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.58 E-value=1e-05 Score=67.14 Aligned_cols=51 Identities=6% Similarity=-0.011 Sum_probs=46.1
Q ss_pred CCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|.++++.+++++++.++++.|++++.+.++|+|+.|...|+++..
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~ 58 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDR 58 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHH
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHH
Confidence 467888778899999999999999999999999999999989999999874
No 99
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.55 E-value=5.8e-05 Score=71.63 Aligned_cols=51 Identities=12% Similarity=0.035 Sum_probs=45.2
Q ss_pred CCcccccccCCcEecCCCCHHHHHHHHHhC-----CceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIRRIPRVSETMPLYDILNEFQKG-----HSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~-----~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|.++++.|++++++.++++.|++. +.+..+|+|+.|...|+++..
T Consensus 135 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~ 190 (278)
T 2yvy_A 135 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLR 190 (278)
T ss_dssp TBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHH
T ss_pred chHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHH
Confidence 457888777899999999999999999986 678899999999999999874
No 100
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.54 E-value=1.5e-05 Score=68.53 Aligned_cols=52 Identities=15% Similarity=0.004 Sum_probs=46.3
Q ss_pred CCCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.+ +++.++++.++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~ 66 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTN 66 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHH
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHH
Confidence 3567888655 799999999999999999999999999999999999999874
No 101
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.47 E-value=1.5e-05 Score=65.21 Aligned_cols=49 Identities=20% Similarity=0.277 Sum_probs=43.9
Q ss_pred CcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 256 PVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++|.++++.+++++++.++++.|++++.+.++|+| .|...|+++..
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~ 50 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTW 50 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHH
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHH
Confidence 35677777899999999999999999999999999999 79999999874
No 102
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.46 E-value=5.6e-05 Score=64.71 Aligned_cols=52 Identities=12% Similarity=0.064 Sum_probs=47.2
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEec--CCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRH--QNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDE--yG~~~g~~~~~ 305 (397)
..+++++|.++++.+++++++.++++.|.+++.+.++|+|+ .|...|+++..
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~ 65 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRA 65 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHH
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHH
Confidence 46788887788999999999999999999999999999996 79999999884
No 103
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.43 E-value=3e-05 Score=80.15 Aligned_cols=108 Identities=12% Similarity=0.219 Sum_probs=7.7
Q ss_pred HHHHHHHHhhccccceecccceeCccEEEEeCCCChhHHHHHHHHhcCCCcccc-h------hhcccC-------CCCCC
Q 015949 190 DETTIITGALELSEKTARDAMTPASETFAIDVSFKLDRNLMRLVLEKGHSRVPV-K------NLLTIH-------PEDEV 255 (397)
Q Consensus 190 ~E~~ii~~~l~l~~~~V~diMtPr~~v~~L~~~~tl~~e~l~~i~~~g~SR~PV-k------Dll~~~-------~~~~~ 255 (397)
++.+++..+=.... .|+. +.+++.++.|+. ++++++.+++||.+|| . .|+++. .+...
T Consensus 129 ~Qa~~V~~VKr~e~-----g~i~--dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~ 200 (556)
T 4af0_A 129 EQAAMVRRVKKYEN-----GFIT--DPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAET 200 (556)
T ss_dssp HHHHHHHHHHHCCC------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccc-----CccC--CCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccce
Confidence 44566766654433 4442 567999999998 9999999999999999 1 233321 12357
Q ss_pred CcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 256 PVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++|.+++..+++..++.++.+.|++++..-++|||+.|...|+++..
T Consensus 201 ~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~k 250 (556)
T 4af0_A 201 PIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARS 250 (556)
T ss_dssp --------------------------------------------------
T ss_pred EhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEec
Confidence 89999888899999999999999999999999999999999999999985
No 104
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.43 E-value=0.0001 Score=63.59 Aligned_cols=52 Identities=12% Similarity=0.005 Sum_probs=47.2
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.++++.|+++.++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~ 55 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQR 55 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHH
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Confidence 3568888777899999999999999999999999999999999999999884
No 105
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.34 E-value=5.9e-05 Score=72.13 Aligned_cols=52 Identities=6% Similarity=-0.014 Sum_probs=46.3
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhC-----CceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKG-----HSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~-----~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.+++++|.++++.|++++++.++++.|++. +.+.++|+|+.|...|+++..
T Consensus 136 ~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~ 192 (286)
T 2oux_A 136 DETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLR 192 (286)
T ss_dssp TTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHH
T ss_pred hHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHH
Confidence 4568888778899999999999999999987 778899999999999999885
No 106
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.30 E-value=0.00015 Score=62.09 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=45.7
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceE-EEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHM-AVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hm-AiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.++++.|++++++.++++.|++.+.+. ++|+|+. ...|+++..
T Consensus 15 ~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~ 66 (157)
T 1o50_A 15 VKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVM 66 (157)
T ss_dssp HHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHH
T ss_pred cccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHH
Confidence 35678887788999999999999999999999999 9999987 899999884
No 107
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.28 E-value=0.00026 Score=64.38 Aligned_cols=51 Identities=14% Similarity=0.166 Sum_probs=46.4
Q ss_pred CCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
....++|.++++.|++++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 13 ~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~ 63 (213)
T 1vr9_A 13 MKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKE 63 (213)
T ss_dssp CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGG
T ss_pred cCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHH
Confidence 346777788999999999999999999999999999999989999999985
No 108
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.23 E-value=0.00018 Score=61.50 Aligned_cols=49 Identities=16% Similarity=0.108 Sum_probs=41.4
Q ss_pred Ccccccc------cCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 256 PVKNVSI------RRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~------r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++++|. ++++.+++++++.++++.|++.+.+.++| ++.|...|+++..
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V-~~~~~~~Givt~~ 62 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLV-VDGDDIAGIVTER 62 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEE-ESSSSEEEEEEHH
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEE-eeCCEEEEEEEHH
Confidence 4677754 45689999999999999999999998888 4579999999884
No 109
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.15 E-value=0.00019 Score=73.70 Aligned_cols=52 Identities=13% Similarity=0.057 Sum_probs=45.3
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhC-----CceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKG-----HSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~-----~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.+++++|.+++..+++++++.++++.|++. +....+|+|+.|...|+++..
T Consensus 154 ~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~ 210 (473)
T 2zy9_A 154 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLR 210 (473)
T ss_dssp TTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHH
T ss_pred CCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHH
Confidence 4568888778899999999999999999985 467889999989999999874
No 110
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.09 E-value=0.001 Score=57.97 Aligned_cols=52 Identities=15% Similarity=0.062 Sum_probs=45.4
Q ss_pred CCCcccccccC----CcEe--cCCCCHHHHHHHHHhCCceEEEEE--ecCCCcccccccc
Q 015949 254 EVPVKNVSIRR----IPRV--SETMPLYDILNEFQKGHSHMAVVV--RHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~----~~~V--pe~~~l~~lL~~fq~~~~hmAiVV--DEyG~~~g~~~~~ 305 (397)
..+++++|.+. ++.| ++++++.++++.|++++.+.++|+ |+.|...|+++..
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~ 69 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRR 69 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHH
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHH
Confidence 45678886554 6888 999999999999999999999999 8899999999874
No 111
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=96.89 E-value=0.00046 Score=71.62 Aligned_cols=52 Identities=8% Similarity=0.057 Sum_probs=48.0
Q ss_pred CCCcccccccCCcEecCC-CCHHHHHHHHHhCCceEEEEEe-cCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSET-MPLYDILNEFQKGHSHMAVVVR-HQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~-~~l~~lL~~fq~~~~hmAiVVD-EyG~~~g~~~~~ 305 (397)
..+++++|.+++..|+++ +++.++++.|++++.+..+|+| +.|...|+++..
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~ 436 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQE 436 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHH
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHH
Confidence 467899988899999999 9999999999999999999999 889999999984
No 112
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=96.88 E-value=0.0003 Score=74.70 Aligned_cols=53 Identities=8% Similarity=-0.044 Sum_probs=47.9
Q ss_pred CCCCcccccc--cCCcEecCCCCHHHHHHHHH-hCCceEEEEEecCCCcccccccc
Q 015949 253 DEVPVKNVSI--RRIPRVSETMPLYDILNEFQ-KGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 253 ~~~~v~~i~~--r~~~~Vpe~~~l~~lL~~fq-~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
...+++++|. +++..+++++++.++++.|+ +++.+..+|+|+.|...|+++..
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~ 506 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRK 506 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHH
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHH
Confidence 3567899977 78999999999999999999 79999999999999999999985
No 113
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.45 E-value=0.00094 Score=69.25 Aligned_cols=48 Identities=13% Similarity=-0.047 Sum_probs=43.1
Q ss_pred ccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEec--CCCcccccccc
Q 015949 258 KNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRH--QNDREQPHVPI 305 (397)
Q Consensus 258 ~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDE--yG~~~g~~~~~ 305 (397)
++.|.+++..++++.++.++++.|++.+....+|+|+ .|...|+++..
T Consensus 116 ~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~r 165 (511)
T 3usb_A 116 ESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNR 165 (511)
T ss_dssp SSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHH
T ss_pred ccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEeh
Confidence 3455678899999999999999999999999999998 89999999874
No 114
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.37 E-value=0.0014 Score=67.77 Aligned_cols=49 Identities=10% Similarity=-0.067 Sum_probs=43.4
Q ss_pred cccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 257 VKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 257 v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..++|.+++..++++.++.++++.|++.+..-.+|+|+.|...|+++..
T Consensus 91 ~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~r 139 (496)
T 4fxs_A 91 FEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGR 139 (496)
T ss_dssp CCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHH
T ss_pred cccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHH
Confidence 4556778999999999999999999999999999999999999999874
No 115
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=96.34 E-value=0.0029 Score=58.20 Aligned_cols=52 Identities=12% Similarity=0.093 Sum_probs=48.5
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+++++|.+++++++++.++.++++.|++++.+.++|+|+.|...|+++..
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~ 57 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTS 57 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHH
Confidence 4678999888999999999999999999999999999999999999999874
No 116
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.23 E-value=0.00087 Score=68.94 Aligned_cols=49 Identities=12% Similarity=-0.034 Sum_probs=0.5
Q ss_pred cccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 257 VKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 257 v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.++|.++++.|++++++.++++.|++.+....+|+|+.|...|+++..
T Consensus 97 ~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~ 145 (494)
T 1vrd_A 97 TENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNR 145 (494)
T ss_dssp C------------------------------------------------
T ss_pred HhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHH
Confidence 4667778899999999999999999999999999999999999999984
No 117
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=96.22 E-value=0.0034 Score=45.90 Aligned_cols=41 Identities=10% Similarity=0.021 Sum_probs=38.0
Q ss_pred CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 264 RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 264 ~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
++..+++++++.++++.|++.+.+.++|+|+ |...|+++..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~ 41 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTER 41 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHH
Confidence 4578999999999999999999999999999 9999999984
No 118
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=96.21 E-value=0.004 Score=52.52 Aligned_cols=51 Identities=18% Similarity=0.170 Sum_probs=46.8
Q ss_pred CCccccccc--CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 255 VPVKNVSIR--RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 255 ~~v~~i~~r--~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+++++|.+ +++.+++++++.++++.|++.+.+.++|+|+.|...|+++..
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~ 80 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDG 80 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHH
Confidence 468888766 799999999999999999999999999999999999999985
No 119
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=95.90 E-value=0.0013 Score=67.98 Aligned_cols=45 Identities=11% Similarity=-0.037 Sum_probs=0.0
Q ss_pred cccCCcEecCCCCHHHHHHHHHhCCceEEEEEecC---CCcccccccc
Q 015949 261 SIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ---NDREQPHVPI 305 (397)
Q Consensus 261 ~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy---G~~~g~~~~~ 305 (397)
|.++++.+++++++.++++.|++.+....+|+|+. |...|+++..
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~ 150 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQR 150 (503)
T ss_dssp ------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHH
Confidence 67789999999999999999999999999999997 8999999984
No 120
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.68 E-value=0.0063 Score=62.31 Aligned_cols=49 Identities=8% Similarity=-0.132 Sum_probs=43.6
Q ss_pred cccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEe--cCCCcccccccc
Q 015949 257 VKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVR--HQNDREQPHVPI 305 (397)
Q Consensus 257 v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVD--EyG~~~g~~~~~ 305 (397)
++++|.+++..++++.++.++++.|++.+..-.+|+| +.|...|+++..
T Consensus 92 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~ 142 (491)
T 1zfj_A 92 SENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNR 142 (491)
T ss_dssp HTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHH
T ss_pred HHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHH
Confidence 3556677889999999999999999999999999999 889999999874
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.60 E-value=0.0022 Score=66.13 Aligned_cols=48 Identities=13% Similarity=-0.000 Sum_probs=1.7
Q ss_pred cccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 257 VKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 257 v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+.++|.+++..++++.++.++++.|++.+....+|+| .|...|+++..
T Consensus 90 ~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~r 137 (490)
T 4avf_A 90 HETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGR 137 (490)
T ss_dssp CCC----------------------------------------------
T ss_pred cccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhH
Confidence 5566778899999999999999999999999999999 79999999984
No 122
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=95.57 E-value=0.0094 Score=44.76 Aligned_cols=41 Identities=10% Similarity=0.021 Sum_probs=37.3
Q ss_pred CCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 264 RIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 264 ~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
+++.|.++.++.++++.|++++...++|+|+ |...|+++..
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~-~~lvGIvT~~ 41 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTER 41 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHH
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHH
Confidence 3578999999999999999999999999986 8999999973
No 123
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=94.97 E-value=0.021 Score=42.75 Aligned_cols=53 Identities=11% Similarity=0.266 Sum_probs=41.4
Q ss_pred cEEEEeCCCChhHHHHHHHHhcCCCcccc------------hhhccc-CCC----CCCCcccccccCCcEe
Q 015949 215 ETFAIDVSFKLDRNLMRLVLEKGHSRVPV------------KNLLTI-HPE----DEVPVKNVSIRRIPRV 268 (397)
Q Consensus 215 ~v~~L~~~~tl~~e~l~~i~~~g~SR~PV------------kDll~~-~~~----~~~~v~~i~~r~~~~V 268 (397)
+++++++++++. ++.+.+.+++++.+|| +|++.. ..+ .+.+++++|.+++..|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367999999998 9999999999999999 677642 211 2467899977777654
No 124
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=94.84 E-value=0.025 Score=41.10 Aligned_cols=51 Identities=12% Similarity=0.224 Sum_probs=38.9
Q ss_pred EEEEeCCCChhHHHHHHHHhcCCCcccc------------hhhcccCC-----CCCCCcccccccCCcE
Q 015949 216 TFAIDVSFKLDRNLMRLVLEKGHSRVPV------------KNLLTIHP-----EDEVPVKNVSIRRIPR 267 (397)
Q Consensus 216 v~~L~~~~tl~~e~l~~i~~~g~SR~PV------------kDll~~~~-----~~~~~v~~i~~r~~~~ 267 (397)
+++++.++++. ++++.+.+++++++|| +|++.... ....+++++|.+++++
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 57899999998 9999999999999999 56665421 1246788886555543
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.82 E-value=0.0035 Score=64.79 Aligned_cols=50 Identities=8% Similarity=-0.099 Sum_probs=24.0
Q ss_pred CcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEec---CCCcccccccc
Q 015949 256 PVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRH---QNDREQPHVPI 305 (397)
Q Consensus 256 ~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDE---yG~~~g~~~~~ 305 (397)
.+.++|.++++.++++.++.++++.|++.+.+-.+|+|+ .|...|+++..
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~ 161 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSR 161 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTT
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHH
Confidence 356777789999999999999999999999999999998 58999999984
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=94.67 E-value=0.0061 Score=62.56 Aligned_cols=47 Identities=9% Similarity=-0.061 Sum_probs=0.4
Q ss_pred ccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 258 KNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 258 ~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
.+.|.+++..++++.++.++++.|++.+....+|+|+ |...|+++..
T Consensus 96 ~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~ 142 (486)
T 2cu0_A 96 ERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKK 142 (486)
T ss_dssp C-----------------------------------------------
T ss_pred hhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHH
Confidence 3455678899999999999999999999888999999 9999999984
No 127
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=92.94 E-value=0.086 Score=49.33 Aligned_cols=52 Identities=13% Similarity=0.180 Sum_probs=47.1
Q ss_pred CCCcccccccCCcEecCCCCHHHHHHHHHhCCceEEEEEecC--CCcccccccc
Q 015949 254 EVPVKNVSIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRHQ--NDREQPHVPI 305 (397)
Q Consensus 254 ~~~v~~i~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDEy--G~~~g~~~~~ 305 (397)
...++++|.+++.+|.+++++.++.+.|++.+.+-.+|||+. |...|+++..
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~ 65 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRT 65 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHH
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHH
Confidence 467899988999999999999999999999999999999974 5689999885
No 128
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.45 E-value=0.036 Score=57.45 Aligned_cols=45 Identities=9% Similarity=-0.166 Sum_probs=0.0
Q ss_pred cccCCcEecCCCCHHHHHHHHHhCCceEEEEEec---CCCcccccccc
Q 015949 261 SIRRIPRVSETMPLYDILNEFQKGHSHMAVVVRH---QNDREQPHVPI 305 (397)
Q Consensus 261 ~~r~~~~Vpe~~~l~~lL~~fq~~~~hmAiVVDE---yG~~~g~~~~~ 305 (397)
++.+|.++.++.++.++++.|++.+..-.+|+|+ .|...|+++..
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~R 191 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGR 191 (556)
T ss_dssp ------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecc
Confidence 4788999999999999999999999888899886 67889999883
No 129
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=35.39 E-value=2.8e+02 Score=25.78 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=24.8
Q ss_pred HHHHhhhHHHHHHHhhHHHHHhHhHHHHHHHHHHHHHHHHhh
Q 015949 109 LSFGEIIPQAVCARYGLAIGAKVAPFVQILVRICFPIAFPVS 150 (397)
Q Consensus 109 lifGEiiPK~la~~~~~~i~~~~a~~l~~~~~l~~Pl~~~l~ 150 (397)
.+|++. .|+...+ ..+-+....+.+-.+.|..||+.|.+.
T Consensus 178 ~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~lg 217 (274)
T 2jaf_A 178 ALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAVG 217 (274)
T ss_dssp HHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444444 6655555 444444555566677788899999763
No 130
>3iz5_e 60S ribosomal protein L7 (L30P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_e
Probab=27.36 E-value=15 Score=34.15 Aligned_cols=32 Identities=9% Similarity=0.022 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCceEEEEEecCCCcccccccc
Q 015949 274 LYDILNEFQKGHSHMAVVVRHQNDREQPHVPI 305 (397)
Q Consensus 274 l~~lL~~fq~~~~hmAiVVDEyG~~~g~~~~~ 305 (397)
..+.|+.++=++.+-++++...-.+.|.+..-
T Consensus 101 ~rktL~~LgL~ki~~~Vfv~~npa~~gML~~V 132 (244)
T 3iz5_e 101 TKKILQLLRLRQIFNGVFLKVNKATINMLRRV 132 (244)
T ss_dssp HHHHHHHTCCCSTTEEEEECSCHHHHHHHTTT
T ss_pred HHHHHHHcCCCccCCEEEEeCCHHHHHHHHHh
Confidence 46778888888888888888777777766653
No 131
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=24.93 E-value=70 Score=20.58 Aligned_cols=20 Identities=15% Similarity=0.398 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 015949 11 GFFTRVVVVTLLVLFAGLMS 30 (397)
Q Consensus 11 ~~~~~ilii~~li~lsa~fS 30 (397)
-+|-.++++++.+++|..|.
T Consensus 17 Ly~GLLlifvlavlFssyff 36 (37)
T 3arc_L 17 LYLGLLLILVLALLFSSYFF 36 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhcc
Confidence 35766777777788887763
No 132
>1xio_A Anabaena sensory rhodopsin; signaling protein, photoreceptor; HET: RET PEE; 2.00A {Nostoc SP} SCOP: f.13.1.1
Probab=24.87 E-value=3.6e+02 Score=24.75 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=23.7
Q ss_pred HHHHHhhhHHHHHHHhh-HHHHHhHhHHHHHHHHHHHHHHHHhh
Q 015949 108 ILSFGEIIPQAVCARYG-LAIGAKVAPFVQILVRICFPIAFPVS 150 (397)
Q Consensus 108 ilifGEiiPK~la~~~~-~~i~~~~a~~l~~~~~l~~Pl~~~l~ 150 (397)
..+|++. .|+...+.| .+-+......+-.+.|..||+.|.++
T Consensus 144 y~l~~~~-~~~a~~~~~~v~~~f~~l~~~v~v~W~iYPI~w~l~ 186 (261)
T 1xio_A 144 WGIWNPL-RAKTRTQSSELANLYDKLVTYFTVLWIGYPIVWIIG 186 (261)
T ss_dssp HHHHTHH-HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445554 554333322 23333444566677788899999765
No 133
>3qbg_A Halorhodopsin; membrane protein, ION pump, retinal, membrane; HET: RET BNG 22B; 1.80A {Natronomonas pharaonis} PDB: 3a7k_A* 3abw_A* 3qbi_A* 3qbk_A* 3qbl_A*
Probab=24.71 E-value=4.3e+02 Score=24.67 Aligned_cols=23 Identities=9% Similarity=0.348 Sum_probs=15.9
Q ss_pred HHhHhHHHHHHHHHHHHHHHHhh
Q 015949 128 GAKVAPFVQILVRICFPIAFPVS 150 (397)
Q Consensus 128 ~~~~a~~l~~~~~l~~Pl~~~l~ 150 (397)
+......+-.+.|..||+.|.++
T Consensus 210 ~f~~L~~~v~v~W~iYPI~w~l~ 232 (291)
T 3qbg_A 210 IFSTLKLLTVVMWLGYPIVWALG 232 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhHHHHHHHHHHHHHHHhhc
Confidence 33344556666788899999875
No 134
>3jyw_F 60S ribosomal protein L7(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_F
Probab=24.54 E-value=20 Score=32.38 Aligned_cols=14 Identities=36% Similarity=0.937 Sum_probs=12.7
Q ss_pred EEEeehhHHHHHhh
Q 015949 383 VGIITLEDVIEELL 396 (397)
Q Consensus 383 ~giit~edv~eell 396 (397)
.|||.|||+++|+.
T Consensus 145 ~gi~ciedli~ei~ 158 (213)
T 3jyw_F 145 YGILSIDDLIHEII 158 (213)
T ss_dssp SCCCCHHHHHHHHT
T ss_pred CCceeHHHHHHHHH
Confidence 59999999999985
No 135
>3ug9_A Archaeal-type opsin 1, archaeal-type opsin 2; microbialrhodopsin, seven-transmembrane, light-gated cation membrane protein; HET: RET OLA; 2.30A {Chlamydomonas reinhardtii}
Probab=22.33 E-value=5e+02 Score=24.89 Aligned_cols=23 Identities=17% Similarity=0.216 Sum_probs=16.5
Q ss_pred HHhHhHHHHHHHHHHHHHHHHhh
Q 015949 128 GAKVAPFVQILVRICFPIAFPVS 150 (397)
Q Consensus 128 ~~~~a~~l~~~~~l~~Pl~~~l~ 150 (397)
+......+-.+.|..||++|.++
T Consensus 227 af~~Lr~~vlV~WaIYPIvW~Lg 249 (333)
T 3ug9_A 227 VVTGMAWLFFVSWGMFPILFILG 249 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhHHHeec
Confidence 34444556677788999999875
No 136
>1m0k_A BR, bacteriorhodopsin; ION pump, membrane protein, retinal protein, lipids, photore haloarchaea, 7-transmembrane, serpentine; HET: RET LI1 SQU; 1.43A {Halobacterium salinarum} SCOP: f.13.1.1 PDB: 1m0l_A* 1m0m_A* 2zfe_A* 2zzl_A* 1p8h_A* 1o0a_A* 1py6_A* 1r2n_A* 1ucq_A* 1vjm_A* 2ntu_A* 2ntw_A* 3har_A* 1c8r_A* 2wjk_A* 2wjl_A* 2i21_A* 1p8i_A* 1p8u_A* 3han_A* ...
Probab=20.64 E-value=4.9e+02 Score=23.79 Aligned_cols=22 Identities=18% Similarity=0.410 Sum_probs=15.2
Q ss_pred HhHhHHHHHHHHHHHHHHHHhh
Q 015949 129 AKVAPFVQILVRICFPIAFPVS 150 (397)
Q Consensus 129 ~~~a~~l~~~~~l~~Pl~~~l~ 150 (397)
......+-.+.|..||+.|.++
T Consensus 184 f~~l~~~v~v~W~iYPi~w~l~ 205 (262)
T 1m0k_A 184 FKVLRNVTVVLWSAYPVVWLIG 205 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3344555666788899999765
Done!