Citrus Sinensis ID: 015953

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRELFDFVVDPTIADDSVDSYLEEVQQKILARGDMSAEDEIADSVFVQSYIPKTLEQVKNAEEDVIRITSGKDTGDMYYKTITGLKETLSKPSPARKELQLDANAAEESSVDLADNSNYSETESESETDEEKDSSPETDTKVPIDKKTARKENKKKVKEEKREARKNKVPKAVKKRKKKLAKAHKTR
ccHHHHHHccccccccccccccccEEEEEEEcccccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEccccccccEEEcccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHccHHHHHHHHHccccccccHHHHHHccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccc
MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRELFDFVVDPTIADDSVDSYLEEVQQKILARG*MS*EDEIADSVFVQSYIPKTLEQVKNAEEDVIRITSGKDTGDMYYKTITGL******************************************************************************************************
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MVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQELAVKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIIAMRTLYQRCKLVHGDLSEYNILYFEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRELFDFVVDPTIADDSVDSYLEEVQQKILARGDMSAEDEIADSVFVQSYIPKTLEQVKNAEEDVIRITSGKDTGDMYYKTITGLKETLSKPSPARKELQLDANAAEESSVDLADNSNYSETESESETDEEKDSSPETDTKVPIDKxxxxxxxxxxxxxxxxxxxxxKVPKAVKKRKKKLAKAHKTR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine/threonine-protein kinase RIO1 probableQ922Q2
Serine/threonine-protein kinase rio1 Required for the final endonucleolytic cleavage at site D converting 20S pre-rRNA into the mature 18S rRNA.probableQ54VD8
Serine/threonine-protein kinase RIO1 probableQ9BRS2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.11.-Protein-serine/threonine kinases.probable
2.7.11.1Transferred entry: 2.7.11.19.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZTH, chain A
Confidence level:very confident
Coverage over the Query: 1-221
View the alignment between query and template
View the model in PyMOL
Template: 4GYI, chain A
Confidence level:very confident
Coverage over the Query: 1-259
View the alignment between query and template
View the model in PyMOL
Template: 4EQM, chain A
Confidence level:confident
Coverage over the Query: 13-49,73-302
View the alignment between query and template
View the model in PyMOL