BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015960
(397 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1
PE=1 SV=2
Length = 439
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/373 (56%), Positives = 263/373 (70%), Gaps = 9/373 (2%)
Query: 30 HFPFMSDSKALILTKQSSSFSLEPFSLLFSGVGSSSTHFFVSRQCKLKTDEVETAGIFEE 89
HF S K L S + S F+ S S++ F VS KL+TDE+ T +F+E
Sbjct: 70 HFTPFSAVKPFFLLCTSVALSFSLFAA--SPAVESASAFVVSTPKKLQTDELATVRLFQE 127
Query: 90 NLPSVVHITNFGM--NTFTL-TMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD 146
N PSVV+ITN + + FTL +E PQ +G+GF+WD+ GHIVTN+HVI GAS ++VTL D
Sbjct: 128 NTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLAD 187
Query: 147 KTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCT 206
+TT DAKVVG DQ D+AVL IDAP +KLR IPVGVSA+L +GQKV+AIG+P G T T
Sbjct: 188 QTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLT 247
Query: 207 AGIISAFGLE-PITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAF 265
G+IS E ATG PIQ +IQ DAAIN GNSGGPLLDSSG+LIG+NT+I + + A
Sbjct: 248 TGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGAS 307
Query: 266 CGMACSIPIDTVSGIVDQLVKFGKIIRPYLGI--AHDQLLEKLMGISGGVIFIAVEEGPA 323
G+ SIP+DTV GIVDQLV+FGK+ RP LGI A DQ +E+L G+SG ++ A GPA
Sbjct: 308 SGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQL-GVSGVLVLDAPPSGPA 366
Query: 324 GKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLE 383
GKAGL+STK G+ +LGDII +VNG VSN +DL+ ILDQCKVGDEV V +LRG E
Sbjct: 367 GKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKE 426
Query: 384 EILIILEVEPDEA 396
+I + LE +PDE+
Sbjct: 427 KISVTLEPKPDES 439
>sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8
PE=1 SV=1
Length = 448
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 188/323 (58%), Gaps = 18/323 (5%)
Query: 86 IFEENLPSVVHITNFGMN---TFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASS--- 139
+FE+N SVV+I + + T +E P+ G+G +WD G+IVTN+HVI A S
Sbjct: 122 LFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEGNGSGVVWDGQGYIVTNYHVIGNALSRNP 181
Query: 140 --------VKVTLFD--KTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIG 189
V + D + + K+VG D+ DLAVL +DAP L+ I VG S +L++G
Sbjct: 182 SPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVG 241
Query: 190 QKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSG 249
Q+ AIG+P G T T G+IS + + TG I G IQ DAAIN GNSGGPLLDS G
Sbjct: 242 QQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTGVTIGGGIQTDAAINPGNSGGPLLDSKG 301
Query: 250 SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGI--AHDQLLEKLM 307
+LIG+NT+I T+T G+ +IP TV IV QL++F K++R + I A D + +L
Sbjct: 302 NLIGINTAIFTQTGTSAGVGFAIPSSTVLKIVPQLIQFSKVLRAGINIELAPDPVANQLN 361
Query: 308 GISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCK 367
+G ++ + A KAGL T G G +LGDII AV+ + V N +L ILD+
Sbjct: 362 VRNGALVLQVPGKSLAEKAGLHPTSRGFAGNIVLGDIIVAVDDKPVKNKAELMKILDEYS 421
Query: 368 VGDEVIVRILRGTQLEEILIILE 390
VGD+V ++I RG + E+ I LE
Sbjct: 422 VGDKVTLKIKRGNEDLELKISLE 444
>sp|P0A3Z5|DEGPL_BRUSU Probable periplasmic serine endoprotease DegP-like OS=Brucella suis
biovar 1 (strain 1330) GN=htrA PE=3 SV=1
Length = 513
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 20/292 (6%)
Query: 110 EYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHID 169
E P A G+GF+ EDG++VTN+HV+ + V L D T LDAK++G D TDLAVL I+
Sbjct: 130 ERPVAQGSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKIN 189
Query: 170 APNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLI 229
AP K + G +R+G V A+G+P G T T+GI+SA G + I A P I
Sbjct: 190 APKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRD-IGAG--PYDDFI 246
Query: 230 QIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGK 289
QIDAA+N+GNSGGP D SG +IG+NT+I + + G+A +IP T +VDQL+K G
Sbjct: 247 QIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPSSTAKQVVDQLIKKGS 306
Query: 290 IIRPYLGIAHDQLLEKL---MGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGD 343
+ R ++G+ + + + +G++ G ++ ++GPA KAG+++ GD
Sbjct: 307 VERGWIGVQIQPVTKDIAASLGLAEEKGAIVASPQDDGPAAKAGIKA-----------GD 355
Query: 344 IIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
+I AVNGE V + DL + G++ + + R + EEI + + P++
Sbjct: 356 VITAVNGETVQDPRDLARKVANIAPGEKAALTVWRKNKAEEINVTIAAMPND 407
>sp|P0C114|DEGPL_BRUAB Probable periplasmic serine endoprotease DegP-like OS=Brucella
abortus biovar 1 (strain 9-941) GN=htrA PE=3 SV=1
Length = 513
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 20/292 (6%)
Query: 110 EYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHID 169
E P A G+GF+ EDG++VTN+HV+ + V L D T LDAK++G D TDLAVL I+
Sbjct: 130 ERPVAQGSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKIN 189
Query: 170 APNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLI 229
AP K + G +R+G V A+G+P G T T+GI+SA G + I A P I
Sbjct: 190 APKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRD-IGAG--PYDDFI 246
Query: 230 QIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGK 289
QIDAA+N+GNSGGP D SG +IG+NT+I + + G+A +IP T +VDQL+K G
Sbjct: 247 QIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPSSTAKQVVDQLIKKGS 306
Query: 290 IIRPYLGIAHDQLLEKL---MGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGD 343
+ R ++G+ + + + +G++ G ++ ++GPA KAG+++ GD
Sbjct: 307 VERGWIGVQIQPVTKDIAASLGLAEEKGAIVASPQDDGPAAKAGIKA-----------GD 355
Query: 344 IIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
+I AVNGE V + DL + G++ + + R + EEI + + P++
Sbjct: 356 VITAVNGETVQDPRDLARKVANIAPGEKAALTVWRKNKAEEINVTIAAMPND 407
>sp|Q2YMX6|DEGPL_BRUA2 Probable periplasmic serine endoprotease DegP-like OS=Brucella
abortus (strain 2308) GN=htrA PE=3 SV=1
Length = 513
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 20/292 (6%)
Query: 110 EYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHID 169
E P A G+GF+ EDG++VTN+HV+ + V L D T LDAK++G D TDLAVL I+
Sbjct: 130 ERPVAQGSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKIN 189
Query: 170 APNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLI 229
AP K + G +R+G V A+G+P G T T+GI+SA G + I A P I
Sbjct: 190 APKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRD-IGAG--PYDDFI 246
Query: 230 QIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGK 289
QIDAA+N+GNSGGP D SG +IG+NT+I + + G+A +IP T +VDQL+K G
Sbjct: 247 QIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPSSTAKQVVDQLIKKGS 306
Query: 290 IIRPYLGIAHDQLLEKL---MGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGD 343
+ R ++G+ + + + +G++ G ++ ++GPA KAG+++ GD
Sbjct: 307 VERGWIGVQIQPVTKDIAASLGLAEEKGAIVASPQDDGPAAKAGIKA-----------GD 355
Query: 344 IIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
+I AVNGE V + DL + G++ + + R + EEI + + P++
Sbjct: 356 VITAVNGETVQDPRDLARKVANIAPGEKAALTVWRKNKAEEINVTIAAMPND 407
>sp|Q8YG32|DEGPL_BRUME Probable periplasmic serine endoprotease DegP-like OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=htrA PE=3 SV=1
Length = 513
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 20/292 (6%)
Query: 110 EYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHID 169
E P A G+GF+ EDG++VTN+HV+ + V L D T LDAK++G D TDLAVL I+
Sbjct: 130 ERPVAQGSGFVISEDGYVVTNNHVVSDGDAYTVVLDDGTELDAKLIGADPRTDLAVLKIN 189
Query: 170 APNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLI 229
AP K + G +R+G V A+G+P G T T+GI+SA G + I A P I
Sbjct: 190 APKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRD-IGAG--PYDDFI 246
Query: 230 QIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGK 289
QIDAA+N+GNSGGP D SG +IG+NT+I + + G+A +IP T +VDQL+K G
Sbjct: 247 QIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSVGIAFAIPSSTAKQVVDQLIKKGS 306
Query: 290 IIRPYLGIAHDQLLEKL---MGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGD 343
+ R ++G+ + + + +G++ G ++ ++GPA KAG+++ GD
Sbjct: 307 VERGWIGVQIQPVTKDIAASLGLAEEKGAIVASPQDDGPAAKAGIKA-----------GD 355
Query: 344 IIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
+I AVNGE V + DL + G++ + + R + EEI + + P++
Sbjct: 356 VITAVNGETVQDPRDLARKVANIAPGEKAALTVWRKNKAEEINVTIAAMPND 407
>sp|Q48EU9|DEGPL_PSE14 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=mucD PE=3 SV=1
Length = 479
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 169/291 (58%), Gaps = 22/291 (7%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+ G+GFI DG+I+TN+HVI+GA + V L D++ L AK++G D TD+AVL ID +
Sbjct: 100 QSLGSGFIISPDGYILTNNHVIDGADEILVRLSDRSELKAKLIGTDSRTDVAVLKIDGKD 159
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
L + +G S L++G+ V AIG P G + T GI+SA G T P IQ D
Sbjct: 160 --LPTAKLGNSNTLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRSLPNDTYVP---FIQTD 214
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AIN GNSGGPL + +G ++G+N+ I TR+ F G++ +IPID + +QL GK+ R
Sbjct: 215 VAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSR 274
Query: 293 PYLGIAHDQL---LEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ ++ L + G+ +G ++ +E+GPA K GL+ +GD+I
Sbjct: 275 GWLGVVIQEVNKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQ-----------VGDVIL 323
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDEAE 397
+ NG+ + + DL +++ K G + + ++R + +++ + + PDE +
Sbjct: 324 SANGQPIIMSADLPHLIGNLKDGSKAELEVIRDGKRQKLTVTVGALPDEGQ 374
>sp|A6VUA4|DEGPL_MARMS Probable periplasmic serine endoprotease DegP-like OS=Marinomonas
sp. (strain MWYL1) GN=Mmwyl1_1102 PE=3 SV=1
Length = 469
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 164/286 (57%), Gaps = 22/286 (7%)
Query: 116 GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKL 175
G+GFI DG+++TN+HVI+GA + V L D+ AK+VG D TDLA+L I+A + L
Sbjct: 98 GSGFIISHDGYVLTNNHVIDGADVIHVRLNDRREYVAKLVGTDPRTDLALLKIEADD--L 155
Query: 176 RSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAI 235
+ +G S L+ GQ V AIG P G +T TAGI+SA G + P IQ D AI
Sbjct: 156 PIVKMGDSDKLKPGQWVLAIGSPFGFDYTVTAGIVSATGRSLPSDNYVP---FIQTDVAI 212
Query: 236 NRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYL 295
N GNSGGPL + G ++G+N+ I TR+ F G++ +IP +VDQL GK+ R +L
Sbjct: 213 NPGNSGGPLFNLDGEVVGINSQIYTRSGGFMGVSFAIPSKVAMSVVDQLKSDGKVSRAWL 272
Query: 296 GI----AHDQLLEK--LMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVN 349
G+ +++L E L +G +I + + PA KAGL+S GDII N
Sbjct: 273 GVLIQDVNNELAESFGLDRSNGALISRVLPDSPAEKAGLKS-----------GDIILEFN 321
Query: 350 GEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
G+ ++++ +L I+ Q K ++V ++ R + + I + LE P++
Sbjct: 322 GQSIAHSGELPYIVGQMKADEKVDAKVYRDGKEQTISVTLEARPND 367
>sp|B1J4D7|DEGPL_PSEPW Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain W619) GN=PputW619_1070 PE=3 SV=1
Length = 479
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 169/289 (58%), Gaps = 22/289 (7%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+ G+GFI DG+++TN+HV+ A + V L D++ L AK+VG D TD+A+L +D N
Sbjct: 98 QSLGSGFIISSDGYVLTNNHVVADADEIIVRLSDRSELQAKLVGTDPRTDVALLKVDGKN 157
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
L ++ +G S L++G+ V AIG P G + T GI+SA G T P IQ D
Sbjct: 158 --LPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRTLPNDTYVP---FIQTD 212
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AIN GNSGGPL + +G ++G+N+ I TR+ F G++ +IPID + +QL K GK+ R
Sbjct: 213 VAINPGNSGGPLFNMNGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSR 272
Query: 293 PYLGIAHDQL---LEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ ++ L + G+ +G ++ +E+GPA K+GL+ +GD+I
Sbjct: 273 GWLGVVIQEVNKDLAESFGLDKPAGALVAQVLEDGPAAKSGLQ-----------VGDVIL 321
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
++NG+ + + DL +++ K G + + I+R + + + + + PD+
Sbjct: 322 SMNGQPIVMSADLPHLVGTLKAGAKAKLEIIRNGKRQNLDVTIGAMPDD 370
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 304 EKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNIL 363
+K + + GGV+ V++GPA GLR GD+I +N + +++A I
Sbjct: 403 KKSLELKGGVVIKEVQDGPAAMIGLRP-----------GDVISHLNNQAIASAKQFTEIA 451
Query: 364 DQCKVGDEVIVRILR 378
V +R+LR
Sbjct: 452 KDLPKNRSVSMRVLR 466
>sp|A5W8F5|DEGPL_PSEP1 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=Pput_4291 PE=3 SV=1
Length = 477
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 167/289 (57%), Gaps = 22/289 (7%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+ G+GFI DG+++TN+HV+ A + V L D++ L AK+VG D TD+A+L +D N
Sbjct: 98 QSLGSGFIISSDGYVLTNNHVVADADEIIVRLSDRSELQAKLVGTDPRTDVALLKVDGKN 157
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
L ++ +G S L++G+ V AIG P G + T GI+SA G T P IQ D
Sbjct: 158 --LPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRTLPNDTYVP---FIQTD 212
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AIN GNSGGPL + G ++G+N+ I TR+ F G++ +IPID + +QL K GK+ R
Sbjct: 213 VAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSR 272
Query: 293 PYLGIAHDQL---LEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ ++ L + G+ +G ++ +E GPA K GL+ +GD+I
Sbjct: 273 GWLGVVIQEVNKDLAESFGLDKPAGALVAQVLENGPAAKGGLQ-----------VGDVIL 321
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
++NG+ + + DL +++ K G++ + I+R + + + I + PD+
Sbjct: 322 SMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVGALPDD 370
Score = 35.4 bits (80), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 304 EKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNIL 363
+K + + GGV+ V++GPA GLR GD+I +N + + +A + I
Sbjct: 401 KKSLELKGGVVIKEVQDGPAAMIGLRP-----------GDVISHLNNQAIGSAKEFTEIA 449
Query: 364 DQCKVGDEVIVRILR 378
+ V +R+LR
Sbjct: 450 KELPKNRSVSMRVLR 464
>sp|P54925|DEGPL_BARHE Probable periplasmic serine endoprotease DegP-like OS=Bartonella
henselae (strain ATCC 49882 / Houston 1) GN=htrA PE=3
SV=2
Length = 503
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 161/289 (55%), Gaps = 20/289 (6%)
Query: 112 PQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171
P A G+GF DG+IVTN+HVI +S V L D T L+AK++G D TDLAVL ++
Sbjct: 123 PIAFGSGFFISSDGYIVTNNHVISDGTSYAVVLDDGTELNAKLIGTDPRTDLAVLKVNE- 181
Query: 172 NHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQI 231
K + G + LR+G V AIG+P G T TAGI+SA G + T IQI
Sbjct: 182 KRKFSYVDFGDDSKLRVGDWVVAIGNPFGLGGTVTAGIVSARGRDIGTGV---YDDFIQI 238
Query: 232 DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKII 291
DAA+NRGNSGGP D +G ++GVNT+I + + G+A +IP T +V QL++ G +
Sbjct: 239 DAAVNRGNSGGPTFDLNGKVVGVNTAIFSPSGGNVGIAFAIPAATAKQVVQQLIEKGLVQ 298
Query: 292 RPYLGIAHDQLLEKL-----MGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
R +LG+ + +++ + + G + +GPA KAG+++ GD+I
Sbjct: 299 RGWLGVQIQPVTKEISDSIGLKEAKGALITDPLKGPAAKAGIKA-----------GDVII 347
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
+VNGE +++ DL + G+ V + + + + E I + L+ P++
Sbjct: 348 SVNGEKINDVRDLAKRIANMSPGETVTLGVWKSGKEENIKVKLDSMPED 396
>sp|P73940|HHOB_SYNY3 Putative serine protease HhoB OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoB PE=1 SV=1
Length = 416
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 164/291 (56%), Gaps = 33/291 (11%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q TG+GFI DG ++TN HV+EGAS+VKVTL D + L+ KV+G D TD+AV+ ++A N
Sbjct: 132 QGTGSGFILSSDGEVLTNAHVVEGASTVKVTLKDGSVLEGKVMGIDTMTDVAVVKVEAEN 191
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGL--IQ 230
L + +G S L+ G+ AIG+PLG T T GIISA G + G P + + IQ
Sbjct: 192 --LPVVEIGQSDRLQPGEWAIAIGNPLGLDNTVTVGIISALGRS-SSEVGVPDKRVRFIQ 248
Query: 231 IDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKI 290
DAAIN GNSGGPLL++ G +IGVNT+I R DA G+ +IPI T + + L GK+
Sbjct: 249 TDAAINPGNSGGPLLNAKGEVIGVNTAI--RADA-QGLGFAIPIQTAQNVAENLFTKGKM 305
Query: 291 IRPYLGIAHDQL---LEKLMGISG----------GVIFIAVEEG-PAGKAGLRSTKFGAN 336
PYLGI L + K + SG GV+ I V G PA +AGL
Sbjct: 306 EHPYLGIHMVTLTPEMTKQLRTSGELPAGVTADTGVLIIQVSPGSPAAQAGLAP------ 359
Query: 337 GKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILI 387
GDII V G V A D+ ++ ++G+ + + + RG + + + +
Sbjct: 360 -----GDIILEVGGMGVKTATDVQERVEVSQIGEPLAIAVKRGQKPQMMAV 405
>sp|B0KV30|DEGPL_PSEPG Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain GB-1) GN=PputGB1_4377 PE=3 SV=1
Length = 477
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 166/289 (57%), Gaps = 22/289 (7%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+ G+GFI DG+++TN+HV+ A + V L D++ L AK+VG D TD+A+L ++ N
Sbjct: 98 QSLGSGFIISSDGYVLTNNHVVADADEIIVRLSDRSELQAKLVGTDPRTDVALLKVEGKN 157
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
L + +G S L++G+ V AIG P G + T GI+SA G T P IQ D
Sbjct: 158 --LPIVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRTLPNDTYVP---FIQTD 212
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AIN GNSGGPL + G ++G+N+ I TR+ F G++ +IPID + +QL K GK+ R
Sbjct: 213 VAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSR 272
Query: 293 PYLGIAHDQL---LEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ ++ L + G+ +G ++ +E GPA K GL+ +GD+I
Sbjct: 273 GWLGVVIQEVNKDLAESFGLDKPAGALVAQVLENGPAAKGGLQ-----------VGDVIL 321
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
++NG+ + + DL +++ K G++ + I+R + + + I + PD+
Sbjct: 322 SMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVGALPDD 370
Score = 35.4 bits (80), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 304 EKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNIL 363
+K + + GGV+ V++GPA GLR GD+I +N + + +A + I
Sbjct: 401 KKSLELKGGVVIKEVQDGPAAMIGLRP-----------GDVISHLNNQAIGSAKEFTEIA 449
Query: 364 DQCKVGDEVIVRILR 378
+ V +R+LR
Sbjct: 450 KELPKNRSVSMRVLR 464
>sp|E1V4H2|DEGPL_HALED Probable periplasmic serine endoprotease DegP-like OS=Halomonas
elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 /
NCIMB 2198 / 1H9) GN=mucD PE=3 SV=1
Length = 474
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 24/292 (8%)
Query: 110 EYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHID 169
E ++ G+GFI EDG+I+TN HV+EGA + V+L D L A++VG D TD+AVL +D
Sbjct: 94 EERRSLGSGFIISEDGYIMTNAHVVEGADEILVSLNDGRELKAELVGADTKTDVAVLKVD 153
Query: 170 APNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLE-PITATGPPIQGL 228
A N L ++ +G S +L++GQ V AIG P G + T+GIISA P P
Sbjct: 154 ADN--LPTLTLGDSEDLKVGQWVAAIGSPFGLDHSVTSGIISAINRTLPRDVYVP----F 207
Query: 229 IQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFG 288
IQ D AIN GNSGGPL + G +IG+N+ I TR+ + G++ +IPID + DQL G
Sbjct: 208 IQTDVAINPGNSGGPLFNLDGEVIGINSQIFTRSGGYMGLSFAIPIDVAMDVADQLRNDG 267
Query: 289 KIIRPYLGIAHDQLLEKL---MGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILG 342
+ R +LG+ + +L G+ G +I +GPA + GL++ G
Sbjct: 268 SVSRGWLGVMIQPVSRELADSFGMDKPQGALIADLDPDGPAARDGLKA-----------G 316
Query: 343 DIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPD 394
D++ V+G+ V +++ L ++ + G++V +++LR + + + + PD
Sbjct: 317 DVVLEVDGQTVDSSSALPRLIGRVSPGNDVELKVLRNGEHRNVTVTVGDWPD 368
>sp|P18584|DEGPL_CHLTR Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=htrA PE=3 SV=2
Length = 497
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 158/286 (55%), Gaps = 21/286 (7%)
Query: 116 GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKL 175
GTGFI EDG++VTNHHV+E A + VTL D AK+VG D TDLAV+ I A KL
Sbjct: 127 GTGFIVSEDGYVVTNHHVVEDAGKIHVTLHDGQKYTAKIVGLDPKTDLAVIKIQA--EKL 184
Query: 176 RSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAI 235
+ G S L+IG AIG+P G + T T G+ISA G + + IQ DAAI
Sbjct: 185 PFLTFGNSDQLQIGDWAIAIGNPFGLQATVTVGVISAKGRNQLHIVD--FEDFIQTDAAI 242
Query: 236 NRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYL 295
N GNSGGPLL+ +G +IGVNT+I++ + + G+ +IP ++DQL+ G++ R +L
Sbjct: 243 NPGNSGGPLLNINGQVIGVNTAIVSGSGGYIGIGFAIPSLMAKRVIDQLISDGQVTRGFL 302
Query: 296 GIAHDQL------LEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVN 349
G+ + KL + G ++ V+ PA KAGLR D+I A N
Sbjct: 303 GVTLQPIDSELATCYKLEKVYGALVTDVVKGSPAEKAGLRQE-----------DVIVAYN 351
Query: 350 GEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
G++V + + L N + G V+++I+R + EI + + P E
Sbjct: 352 GKEVESLSALRNAISLMMPGTRVVLKIVREGKTIEIPVTVTQIPTE 397
>sp|Q52894|DEGPL_RHIME Probable periplasmic serine endoprotease DegP-like OS=Rhizobium
meliloti (strain 1021) GN=degP1 PE=3 SV=2
Length = 504
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 161/292 (55%), Gaps = 21/292 (7%)
Query: 112 PQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171
P+A G+GF EDG++VTN+HV+ S+ V + D T LDAK+VG D TDLAVL +D
Sbjct: 120 PRAQGSGFFITEDGYLVTNNHVVSDGSAFTVIMNDGTELDAKLVGKDSRTDLAVLKVD-D 178
Query: 172 NHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQI 231
K + +R+G V A+G+P G T TAGIISA G + +GP +Q+
Sbjct: 179 KRKFTYVSFADDEKVRVGDWVVAVGNPFGLGGTVTAGIISARGRD--IGSGP-YDDYLQV 235
Query: 232 DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKII 291
DAA+NRGNSGGP + SG ++G+NT+I + + G+A +IP +VD L+K G +
Sbjct: 236 DAAVNRGNSGGPTFNLSGEVVGINTAIFSPSGGNVGIAFAIPASVAKDVVDSLIKDGTVS 295
Query: 292 RPYLGIAHDQLLEKL---MGIS--GGVIFIAVEEG-PAGKAGLRSTKFGANGKFILGDII 345
R +LG+ + + + +G+S G + + + G P KAG+++ GD++
Sbjct: 296 RGWLGVQIQPVTKDIAESLGLSEANGALVVEPQAGSPGEKAGIKN-----------GDVV 344
Query: 346 KAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDEAE 397
A+NGE V + DL + + G V + R + E + + + P +A+
Sbjct: 345 TALNGEPVKDPRDLARRVAALRPGSTAEVTLWRSGKSETVNLEIGTLPSDAK 396
>sp|Q9PL97|DEGPL_CHLMU Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=htrA PE=3 SV=1
Length = 497
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 157/286 (54%), Gaps = 21/286 (7%)
Query: 116 GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKL 175
GTGFI EDG++VTNHHV+E A + VTL D AK++G D TDLAV+ I A N L
Sbjct: 127 GTGFIVSEDGYVVTNHHVVEDAGKIHVTLHDGQKYTAKIIGLDPKTDLAVIKIQAKN--L 184
Query: 176 RSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAI 235
+ G S L+IG AIG+P G + T T G+ISA G + + IQ DAAI
Sbjct: 185 PFLTFGNSDQLQIGDWSIAIGNPFGLQATVTVGVISAKGRNQLHIVD--FEDFIQTDAAI 242
Query: 236 NRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYL 295
N GNSGGPLL+ G +IGVNT+I++ + + G+ +IP ++DQL+ G++ R +L
Sbjct: 243 NPGNSGGPLLNIDGQVIGVNTAIVSGSGGYIGIGFAIPSLMAKRVIDQLISDGQVTRGFL 302
Query: 296 GIAHDQL------LEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVN 349
G+ + KL + G +I V+ PA KAGLR D+I A N
Sbjct: 303 GVTLQPIDSELAACYKLEKVYGALITDVVKGSPAEKAGLRQE-----------DVIVAYN 351
Query: 350 GEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
G++V + + L N + G V+++++R + EI + + P E
Sbjct: 352 GKEVESLSALRNAISLMMPGTRVVLKVVREGKFIEIPVTVTQIPAE 397
>sp|Q2SL36|DEGPL_HAHCH Probable periplasmic serine endoprotease DegP-like OS=Hahella
chejuensis (strain KCTC 2396) GN=mucD PE=3 SV=1
Length = 469
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 170/290 (58%), Gaps = 23/290 (7%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+TG+GFI +DG+I+TN+HV+ GA + V L D+ L AK++G D+ +DLAVL ++A +
Sbjct: 89 QSTGSGFIVSKDGYILTNNHVVAGADEIFVRLMDRRELTAKLIGSDEKSDLAVLKVEADD 148
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
L + +G S+ L++G+ V AIG P G ++T TAGI+SA G P IQ D
Sbjct: 149 --LPVLNLGKSSELKVGEWVVAIGSPFGFEYTVTAGIVSAKGRSLPNENYVP---FIQTD 203
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AIN GNSGGPL + G ++G+N+ I TR+ F G++ +IPID +++QL G + R
Sbjct: 204 VAINPGNSGGPLFNLEGEVVGINSQIYTRSGGFMGVSFAIPIDVALDVMNQLKDTGAVKR 263
Query: 293 PYLGI----AHDQLLE--KLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ + L E L G ++ ++ PA KAGL+ GD+I
Sbjct: 264 GWLGVLIQEVNKDLAESFNLNKPRGALVAQVMKGSPADKAGLQP-----------GDVIV 312
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRIL-RGTQLEEILIILEVEPDE 395
+ NG ++ +++L +++ + G + ++++ RG +++ + I ++ D+
Sbjct: 313 SYNGNEIGLSSELPHLVGRTSPGQKASMKVVRRGDEMDVAVEIGQLPADD 362
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 307 MGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQC 366
M ++GGV+ V GPA AG++ D+I ++N +DV H ++++
Sbjct: 395 MQVAGGVMVAQVFPGPAATAGIQPN-----------DVISSINNKDVETVAQFHEVVEKL 443
Query: 367 KVGDEVIVRILR 378
VG + V I+R
Sbjct: 444 PVGKSLPVLIIR 455
>sp|Q9R9I1|HTRB_BACSU Serine protease Do-like HtrB OS=Bacillus subtilis (strain 168)
GN=htrB PE=2 SV=1
Length = 458
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 162/279 (58%), Gaps = 32/279 (11%)
Query: 119 FIWDED-GHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRS 177
F D D +I+TN+HV+EGA+ + VTL++ T AK+VG D TDLAVL I N K +
Sbjct: 173 FKKDSDKAYIITNNHVVEGANKLTVTLYNGETETAKLVGSDTITDLAVLEISGKNVK-KV 231
Query: 178 IPVGVSANLRIGQKVYAIGHPLGRKF--TCTAGIISAFG--LEPITATGPPIQGLIQIDA 233
G S+ LR G+KV AIG+PLG++F T T GIIS ++ T G ++Q DA
Sbjct: 232 ASFGDSSQLRTGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDA 291
Query: 234 AINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRP 293
AIN GNSGGPL+++SG +IG+N+ ++ + + +IP + V IVDQL++ GK+ RP
Sbjct: 292 AINPGNSGGPLINASGQVIGINSLKVSES-GVESLGFAIPSNDVEPIVDQLLQNGKVDRP 350
Query: 294 YLGIAH-------DQLLEKLMGISG-----GVIFIAVE-EGPAGKAGLRSTKFGANGKFI 340
+LG+ + E +G+ G GV V+ PA KAG++S
Sbjct: 351 FLGVQMIDMSQVPETYQENTLGLFGDQLGKGVYVKEVQANSPAEKAGIKSE--------- 401
Query: 341 LGDIIKAVNGEDVSNANDLHNIL-DQCKVGDEVIVRILR 378
D+I +NG+DV ++ D+ IL KVGD+ +++LR
Sbjct: 402 --DVIVKLNGKDVESSADIRQILYKDLKVGDKTTIQVLR 438
>sp|F6AA62|DEGPL_PSEF1 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
fulva (strain 12-X) GN=Psefu_3239 PE=3 SV=1
Length = 479
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 162/272 (59%), Gaps = 22/272 (8%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+ G+GFI +DG+I+TN+HV+ A + V L D++ L+AK++G D +D+A+L ++A
Sbjct: 99 QSLGSGFIISKDGYILTNNHVVADADEIIVRLSDRSELEAKLIGTDPRSDVALLKVEA-- 156
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
+ L ++ +G S NL++G+ V AIG P G + TAGI+SA G + P IQ D
Sbjct: 157 NDLPTVKLGNSDNLKVGEWVLAIGSPFGFDHSVTAGIVSAKGRSLPNESYVP---FIQTD 213
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AIN GNSGGPL + G ++G+N+ I TR+ F G++ +IP+ + DQL GK+ R
Sbjct: 214 VAINPGNSGGPLFNLDGEVVGINSQIFTRSGGFMGLSFAIPMSVAMDVADQLKASGKVSR 273
Query: 293 PYLGIAHDQL---LEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ ++ L + G+ +G ++ +E+GPA K GL+ +GD+I
Sbjct: 274 GWLGVVIQEVNKDLAESFGLEKPAGALVAQVLEDGPAAKGGLQ-----------VGDVIL 322
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILR 378
+++G+ + + DL +++ K G + + I+R
Sbjct: 323 SLDGKPIIMSADLPHLVGALKPGTKANLEIVR 354
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 304 EKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNIL 363
+K + + GGV+ V++GPA GLR GD+I +N + +++A + +
Sbjct: 403 KKALDLRGGVVIREVQDGPAALIGLRP-----------GDVITHLNNQAITSAKNFTEVA 451
Query: 364 DQCKVGDEVIVRILR 378
V +R+LR
Sbjct: 452 QSLPKNRSVSMRVLR 466
>sp|Q9Z4H7|HTRA_LACHE Serine protease Do-like HtrA OS=Lactobacillus helveticus GN=htrA
PE=3 SV=2
Length = 413
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 169/295 (57%), Gaps = 34/295 (11%)
Query: 116 GTGFIW---DEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
G+G ++ + G+IVTN+HVI G+ +V+V L + T++AKVVG D TDLAVL IDA
Sbjct: 131 GSGVVYMKSNGKGYIVTNNHVISGSDAVQVLLANGKTVNAKVVGKDSTTDLAVLSIDAK- 189
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKF--TCTAGIISAFGLEPITATGPPIQGLIQ 230
+ ++ G S +L GQ V A+G PLG ++ T T GIISA T++G Q +IQ
Sbjct: 190 YVTQTAQFGDSKHLEAGQTVIAVGSPLGSEYASTVTQGIISAPARTISTSSGNQ-QTVIQ 248
Query: 231 IDAAINRGNSGGPLLDSSGSLIGVNTSIITRTD---AFCGMACSIPIDTVSGIVDQLVKF 287
DAAIN GNSGG L++S+G +IG+N+ + ++ + GMA +IP + V IV++LVK
Sbjct: 249 TDAAINPGNSGGALVNSAGQVIGINSMKLAQSSDGTSVEGMAFAIPSNEVVTIVNELVKK 308
Query: 288 GKIIRPYLGI----------AHDQLLEKLMGISGGVIFIAV--EEGPAGKAGLRSTKFGA 335
GKI RP LG+ + L+ + G I+IA G A AG++S
Sbjct: 309 GKITRPQLGVRVIALQGIPEGYRSRLKIKSNLKNG-IYIAFVSRNGSAANAGIKS----- 362
Query: 336 NGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILE 390
GD+I V+G+ V + LH+IL KVGD V V + R + ++ + LE
Sbjct: 363 ------GDVITKVDGKKVEDVASLHSILYSHKVGDTVNVTVNRNGKDVDMKVKLE 411
>sp|O34358|HTRA_BACSU Serine protease Do-like HtrA OS=Bacillus subtilis (strain 168)
GN=htrA PE=2 SV=2
Length = 449
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 181/330 (54%), Gaps = 43/330 (13%)
Query: 79 DEVETAGIFEENLPSVVHITNFGMNTFTLTMEYPQ---------ATGTGFIWDED---GH 126
D + + + E+ P++V ITN + + +G+G I+ ++ +
Sbjct: 114 DSSKISDMVEDLSPAIVGITNLQAQSNSSLFGSSSSDSSEDTESGSGSGVIFKKENGKAY 173
Query: 127 IVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANL 186
I+TN+HV+EGASS+KV+L+D T + AK+VG D TDLAVL I + +H + G S++L
Sbjct: 174 IITNNHVVEGASSLKVSLYDGTEVTAKLVGSDSLTDLAVLQI-SDDHVTKVANFGDSSDL 232
Query: 187 RIGQKVYAIGHPLGRKF--TCTAGIISAFG--LEPITATGPPIQGLIQIDAAINRGNSGG 242
R G+ V AIG PLG+ T T GI+S + T+ G +IQ DAAIN GNSGG
Sbjct: 233 RTGETVIAIGDPLGKDLSRTVTQGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNSGG 292
Query: 243 PLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHDQL 302
PLL++ G ++G+N+ I+ D G+ +IP + V I ++L+ G+I RPY+G++ L
Sbjct: 293 PLLNTDGKIVGINSMKISEDD-VEGIGFAIPSNDVKPIAEELLSKGQIERPYIGVSMLDL 351
Query: 303 -------LEKLMGISG-----GVIFIAVEEG-PAGKAGLRSTKFGANGKFILGDIIKAVN 349
E +G+ G GV V G PA KAGL++ DII +
Sbjct: 352 EQVPQNYQEGTLGLFGSQLNKGVYIREVASGSPAEKAGLKAE-----------DIIIGLK 400
Query: 350 GEDVSNANDLHNIL-DQCKVGDEVIVRILR 378
G+++ ++L NIL K+GD V V+ILR
Sbjct: 401 GKEIDTGSELRNILYKDAKIGDTVEVKILR 430
>sp|Q4KGQ4|DEGPL_PSEF5 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=mucD PE=1
SV=1
Length = 476
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 163/289 (56%), Gaps = 22/289 (7%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+ G+GFI DG+I+TN+HVI A + V L D++ L AK++G D +D+A+L ID +
Sbjct: 97 QSLGSGFIISADGYILTNNHVIADADEILVRLADRSELKAKLIGTDPRSDVALLKIDGKD 156
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
L + +G S +L+ GQ V AIG P G T T GI+SA G P IQ D
Sbjct: 157 --LPVLKLGKSQDLKAGQWVVAIGSPFGFDHTVTQGIVSAIGRSLPNENYVP---FIQTD 211
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
IN GNSGGPL + +G ++G+N+ I TR+ F G++ +IPID + +QL GK+ R
Sbjct: 212 VPINPGNSGGPLFNLAGEVVGINSQIYTRSGGFMGVSFAIPIDVAMDVSNQLKTGGKVSR 271
Query: 293 PYLGIAHDQL---LEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ ++ L + G+ +G ++ ++GPA K GL+ +GD+I
Sbjct: 272 GWLGVVIQEVNKDLAESFGLEKPAGALVAQIQDDGPAAKGGLQ-----------VGDVIL 320
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
++NG+ + + DL +++ K G + + ++R + + + + + P+E
Sbjct: 321 SLNGQPIVMSADLPHLVGALKAGAKANLEVIRDGKRKNVELTVGAIPEE 369
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 295 LGIAHDQL---LEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGE 351
LG+A +L +K + GGV+ V++GPA GL+ GD+I +N +
Sbjct: 388 LGVAVVELNDEQKKAFDLKGGVVIKEVQDGPAALIGLQP-----------GDVITHLNNQ 436
Query: 352 DVSNANDLHNILDQCKVGDEVIVRILR 378
+++A + I V +R+LR
Sbjct: 437 AITSAKEFTEIAKALPKNRSVSMRVLR 463
>sp|A4XSC0|DEGPL_PSEMY Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_1471 PE=3 SV=1
Length = 474
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 170/291 (58%), Gaps = 22/291 (7%)
Query: 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
Q+ G+GFI DG+++TN+HV+ A + V L D++ L+AK++G D +D+A+L ++
Sbjct: 94 QSLGSGFIISADGYVLTNNHVVADADEIIVRLSDRSELEAKLIGADPRSDVALLKVEG-- 151
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
L ++ +G S L++G+ V AIG P G + TAGI+SA G + + P IQ D
Sbjct: 152 KGLPTVRLGKSDELKVGEWVLAIGSPFGFDHSVTAGIVSAKGRNLPSDSYVP---FIQTD 208
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AIN GNSGGPL + G ++G+N+ I TR+ F G++ +IP++ + +QL GK+ R
Sbjct: 209 VAINPGNSGGPLFNLKGEVVGINSQIFTRSGGFMGLSFAIPMEVALQVSEQLKADGKVTR 268
Query: 293 PYLGIAHDQL---LEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
+LG+ ++ L + G+ +G ++ +E+GPA K GL+ +GD+I
Sbjct: 269 GWLGVVIQEVNKDLAESFGLDRPAGALVAQVLEDGPADKGGLQ-----------VGDVIL 317
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDEAE 397
++NG+ + + DL +++ K G++ + ++R +++ + + P+E +
Sbjct: 318 SLNGKPIVMSADLPHLVGGLKPGEKAEMDVVRDGSRKKLKVTIGTLPEEGQ 368
>sp|P72780|HHOA_SYNY3 Putative serine protease HhoA OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoA PE=1 SV=1
Length = 394
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 154/281 (54%), Gaps = 29/281 (10%)
Query: 116 GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKL 175
G+GFI D G I+TN HV++GAS V VTL D T D +V G D+ TDLAV+ I+ L
Sbjct: 112 GSGFIIDNSGIILTNAHVVDGASKVVVTLRDGRTFDGQVRGTDEVTDLAVVKIEPQGSAL 171
Query: 176 RSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQ-GLIQIDAA 234
P+G S+NL++G A+G+P+G T T GIIS G A P + IQ DAA
Sbjct: 172 PVAPLGTSSNLQVGDWAIAVGNPVGLDNTVTLGIISTLGRSAAQAGIPDKRVEFIQTDAA 231
Query: 235 INRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPY 294
IN GNSGGPLL++ G +IG+NT+I R DA G+ +IPID I + L G + PY
Sbjct: 232 INPGNSGGPLLNARGEVIGINTAI--RADA-TGIGFAIPIDQAKAIQNTLAAGGTVPHPY 288
Query: 295 LG-----IAHDQLLEK--------LMGISGGVIFIAVEEG-PAGKAGLRSTKFGANGKFI 340
+G I DQ + ++ G++ + V G PA +AG+R
Sbjct: 289 IGVQMMNITVDQAQQNNRNPNSPFIIPEVDGILVMRVLPGTPAERAGIRR---------- 338
Query: 341 LGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQ 381
GD+I AV+G +S+ L I++Q + + + +LRG +
Sbjct: 339 -GDVIVAVDGTPISDGARLQRIVEQAGLNKALKLDLLRGDR 378
>sp|P73354|HTRA_SYNY3 Putative serine protease HtrA OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=htrA PE=1 SV=1
Length = 452
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 191/390 (48%), Gaps = 38/390 (9%)
Query: 18 NNKLSPPLINRYHFPFMSDSKALILTKQSSSFSLEPFSLLFSGVGSSSTHFFVSRQCKLK 77
NN + PL+ ++S A L QS EP + + V ST V R K
Sbjct: 82 NNSVISPLVTNQSIAPANESLATNL--QSRLSPREPSNFVVDVV--ESTGPAVVRINAQK 137
Query: 78 TDEVETAGIFEENLPSVVHITNFGMNTFTLTMEYPQ-ATGTGFIWDEDGHIVTNHHVIEG 136
T + + F N P + FG + E Q TG+GFI DG I TN HV++G
Sbjct: 138 TVKSQVPQAF--NDPFLQRF--FGSQMPPMPNERVQRGTGSGFIVSNDGKIFTNAHVVDG 193
Query: 137 ASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIG 196
A V VTL D + +V+G D TD+AV+ I+A L ++ +G S +L++G+ AIG
Sbjct: 194 ADEVTVTLKDGRSFPGRVMGSDPSTDVAVVKIEA--GDLPTVALGDSDHLQVGEWAIAIG 251
Query: 197 HPLGRKFTCTAGIISAFGLEPITATGPPIQ-GLIQIDAAINRGNSGGPLLDSSGSLIGVN 255
+PLG T T GI+SA G P + IQ DAAIN GNSGGPLL++ G +IG+N
Sbjct: 252 NPLGLDNTVTTGILSATGRRSADIGVPDKRVEFIQTDAAINPGNSGGPLLNADGQVIGMN 311
Query: 256 TSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHDQLLEKL--------- 306
T+II G+ +IPI+ I QL+ GK+ YLGI + +L
Sbjct: 312 TAIIQNAQ---GIGFAIPINKAQEIAQQLIATGKVEHAYLGIQMVTMTPELQSQIRQETG 368
Query: 307 MGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNIL 363
M I G VI + PA A L GD+++++ G+ V NA + +++
Sbjct: 369 MNIPVDKGVVIMQVMPNSPAAIAKLEQ-----------GDVLQSLQGQPVENAEQVQSLV 417
Query: 364 DQCKVGDEVIVRILRGTQLEEILIILEVEP 393
+ VGDEV + ILR Q + + + + P
Sbjct: 418 GKLAVGDEVELGILRNGQQQNLTVTIGALP 447
>sp|P05676|Y938_SYNP6 Uncharacterized serine protease syc0938_d OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=syc0938_d PE=3 SV=2
Length = 406
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 158/304 (51%), Gaps = 30/304 (9%)
Query: 100 FGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQ 159
FG E + G+GF+ D +G I+TN HV+ A V+VTL D +V G D
Sbjct: 109 FGNVNPPARQEVQRGQGSGFVVDGNGLIMTNAHVVANADQVRVTLRDGREFTGRVRGADS 168
Query: 160 GTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPIT 219
TDLA++ +D +L + +G S+N+ +G AIG+PLG T T GI+S+ G +
Sbjct: 169 VTDLALVEVDTKGERLPTARIGNSSNVEVGDWAIAIGNPLGLDNTVTLGIVSSLGRRS-S 227
Query: 220 ATGPPIQGL--IQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTV 277
A G P + L IQ DA IN GNSGGPL++S G +IG+NT+I R G+ +IP++T
Sbjct: 228 AVGIPDKRLDFIQTDAVINPGNSGGPLVNSRGEVIGINTAI--RQAPGAGIGFAIPVNTA 285
Query: 278 SGIVDQLVKFGKIIRPYLGI---------AHDQLLE-----KLMGISGGVIFIAVEEGPA 323
I QL+K GK+ YLG+ A D + +L + G +I PA
Sbjct: 286 KQIETQLLKNGKVSHSYLGVQLLSLTPQMARDNNRDPNSTVRLPEVQGVLIMGVQRNAPA 345
Query: 324 GKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLE 383
AGLR GD++ A +G+ V+ A++ ++ +VG + + ++R +
Sbjct: 346 ATAGLRR-----------GDVVIATDGQAVTTADEFQRRVEASQVGQSLNLSVIRDGNRQ 394
Query: 384 EILI 387
+I +
Sbjct: 395 QIAV 398
>sp|P45129|HTOA_HAEIN Probable periplasmic serine protease do/HhoA-like OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1259 PE=3 SV=1
Length = 466
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 162/284 (57%), Gaps = 20/284 (7%)
Query: 116 GTGFIWD-EDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHK 174
G+G I + G+++TN+HVI+GA + V L D AK+VG D+ +D+A++ ++ P++
Sbjct: 103 GSGVIINASKGYVLTNNHVIDGADKITVQLQDGREFKAKLVGKDEQSDIALVQLEKPSN- 161
Query: 175 LRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAA 234
L I S LR+G AIG+P G T T+GI+SA G + +G + IQ DAA
Sbjct: 162 LTEIKFADSDKLRVGDFTVAIGNPFGLGQTVTSGIVSALGRSTGSDSGT-YENYIQTDAA 220
Query: 235 INRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPY 294
+NRGNSGG L++ +G LIG+NT+II+ + G+A +IP + S +V Q+++FG++ R
Sbjct: 221 VNRGNSGGALVNLNGELIGINTAIISPSGGNAGIAFAIPSNQASNLVQQILEFGQVRRGL 280
Query: 295 LGIAHDQL---LEKLMGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAV 348
LGI +L L K +S G + + + A KAGL++ GDII A+
Sbjct: 281 LGIKGGELNADLAKAFNVSAQQGAFVSEVLPKSAAEKAGLKA-----------GDIITAM 329
Query: 349 NGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVE 392
NG+ +S+ ++ + G E+ + LR + ++ + L+ +
Sbjct: 330 NGQKISSFAEIRAKIATTGAGKEISLTYLRDGKSHDVKMKLQAD 373
>sp|Q9Z6T0|DEGPL_CHLPN Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
pneumoniae GN=htrA PE=3 SV=1
Length = 488
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 160/296 (54%), Gaps = 25/296 (8%)
Query: 110 EYPQAT----GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAV 165
E PQ+ GTGF+ DG+IVTN+HV+E + VTL D A V+G D TDLAV
Sbjct: 108 EKPQSKEAVRGTGFLVSPDGYIVTNNHVVEDTGKIHVTLHDGQKYPATVIGLDPKTDLAV 167
Query: 166 LHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPI 225
+ I + N L + G S +L++G AIG+P G + T T G+ISA G +
Sbjct: 168 IKIKSQN--LPYLSFGNSDHLKVGDWAIAIGNPFGLQATVTVGVISAKGRNQLHIAD--F 223
Query: 226 QGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285
+ IQ DAAIN GNSGGPLL+ G +IGVNT+I++ + + G+ +IP + I+DQL+
Sbjct: 224 EDFIQTDAAINPGNSGGPLLNIDGQVIGVNTAIVSGSGGYIGIGFAIPSLMANRIIDQLI 283
Query: 286 KFGKIIRPYLGI------AHDQLLEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKF 339
+ G++ R +LG+ A KL + G ++ V+ PA KAGL+
Sbjct: 284 RDGQVTRGFLGVTLQPIDAELAACYKLEKVYGALVTDVVKGSPADKAGLKQE-------- 335
Query: 340 ILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
D+I A NG++V + + N + ++++++R ++ EI + + P E
Sbjct: 336 ---DVIIAYNGKEVDSLSMFRNAVSLMNPDTRIVLKVVREGKVIEIPVTVSQAPKE 388
>sp|P0C0V0|DEGP_ECOLI Periplasmic serine endoprotease DegP OS=Escherichia coli (strain
K12) GN=degP PE=1 SV=1
Length = 474
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 153/272 (56%), Gaps = 21/272 (7%)
Query: 114 ATGTGFIWDED-GHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
A G+G I D D G++VTN+HV++ A+ +KV L D DAK+VG D +D+A++ I P
Sbjct: 112 ALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPK 171
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
+ L +I + S LR+G AIG+P G T T+GI+SA G + A + IQ D
Sbjct: 172 N-LTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAEN--YENFIQTD 228
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AAINRGNSGG L++ +G LIG+NT+I+ G+ +IP + V + Q+V++G++ R
Sbjct: 229 AAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKR 288
Query: 293 PYLGIAHDQL---LEKLMGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
LGI +L L K M + G + + A KAG+++ GD+I
Sbjct: 289 GELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKA-----------GDVIT 337
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILR 378
++NG+ +S+ L + VG ++ + +LR
Sbjct: 338 SLNGKPISSFAALRAQVGTMPVGSKLTLGLLR 369
>sp|P0C0V1|DEGP_ECO57 Periplasmic serine endoprotease DegP OS=Escherichia coli O157:H7
GN=degP PE=3 SV=1
Length = 474
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 153/272 (56%), Gaps = 21/272 (7%)
Query: 114 ATGTGFIWDED-GHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
A G+G I D D G++VTN+HV++ A+ +KV L D DAK+VG D +D+A++ I P
Sbjct: 112 ALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPK 171
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
+ L +I + S LR+G AIG+P G T T+GI+SA G + A + IQ D
Sbjct: 172 N-LTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAEN--YENFIQTD 228
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AAINRGNSGG L++ +G LIG+NT+I+ G+ +IP + V + Q+V++G++ R
Sbjct: 229 AAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKR 288
Query: 293 PYLGIAHDQL---LEKLMGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
LGI +L L K M + G + + A KAG+++ GD+I
Sbjct: 289 GELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKA-----------GDVIT 337
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILR 378
++NG+ +S+ L + VG ++ + +LR
Sbjct: 338 SLNGKPISSFAALRAQVGTMPVGSKLTLGLLR 369
>sp|P39668|YYXA_BACSU Uncharacterized serine protease YyxA OS=Bacillus subtilis (strain
168) GN=yyxA PE=3 SV=2
Length = 400
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 179/324 (55%), Gaps = 44/324 (13%)
Query: 92 PSVVHITNFGMNTFTLTMEYPQA-TGTGFIWDEDGH---IVTNHHVIEGASSVKVTLFDK 147
P+VV + N + + E +A +G+G I+ ++ H +VTNHHVIEGAS ++++L D
Sbjct: 87 PAVVGVVN--IQKSDIWGESGEAGSGSGVIYKKNDHSAYVVTNHHVIEGASQIEISLKDG 144
Query: 148 TTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIP-VGVSANLRIGQKVYAIGHPLGRKF--T 204
+ + A +VG DQ DLAVL + + K++++ G S ++ G+ V AIG+PLG +F +
Sbjct: 145 SRVSADLVGSDQLMDLAVLRVKS--DKIKAVADFGNSDKVKSGEPVIAIGNPLGLEFAGS 202
Query: 205 CTAGIISAFGLE---PITATG---PPIQG-LIQIDAAINRGNSGGPLLDSSGSLIGVNTS 257
T G+IS G E P+ + G P ++Q DAAIN GNSGG LL+ G +IG+N+
Sbjct: 203 VTQGVIS--GTERAIPVDSNGDGQPDWNAEVLQTDAAINPGNSGGALLNMDGKVIGINSM 260
Query: 258 IITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIA-----------HDQLLEKL 306
I + A G+ SIP V +++ L ++GK+ RP+LGI D+ L+
Sbjct: 261 KIAES-AVEGIGLSIPSKLVIPVIEDLERYGKVKRPFLGIEMKSLSDIASYHWDETLKLP 319
Query: 307 MGISGGVIFIAVEE-GPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQ 365
++ G + + V+ PAGKAGL+ D+I +G V++ DL L Q
Sbjct: 320 KNVTNGAVVMGVDAFSPAGKAGLKEL-----------DVITEFDGYKVNDIVDLRKRLYQ 368
Query: 366 CKVGDEVIVRILRGTQLEEILIIL 389
KVGD V V+ RG + + + I L
Sbjct: 369 KKVGDRVKVKFYRGGKEKSVDIKL 392
>sp|P26982|DEGP_SALTY Periplasmic serine endoprotease DegP OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=degP PE=3 SV=1
Length = 475
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 151/272 (55%), Gaps = 21/272 (7%)
Query: 114 ATGTGFIWDE-DGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
A G+G I D G++VTN+HV++ AS +KV L D DAKVVG D +D+A++ I P
Sbjct: 113 ALGSGVIIDAAKGYVVTNNHVVDNASVIKVQLSDGRKFDAKVVGKDPRSDIALIQIQNPK 172
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQID 232
+ L +I + S LR+G AIG+P G T T+GI+SA G + + IQ D
Sbjct: 173 N-LTAIKLADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNVEN--YENFIQTD 229
Query: 233 AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIR 292
AAINRGNSGG L++ +G LIG+NT+I+ G+ +IP + V + Q+V++G++ R
Sbjct: 230 AAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKR 289
Query: 293 PYLGIAHDQL---LEKLMGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIK 346
LGI +L L K M + G + + A KAG+++ GD+I
Sbjct: 290 GELGIMGTELNSELAKAMKVDAQRGAFVSQVMPNSSAAKAGIKA-----------GDVIT 338
Query: 347 AVNGEDVSNANDLHNILDQCKVGDEVIVRILR 378
++NG+ +S+ L + VG ++ + +LR
Sbjct: 339 SLNGKPISSFAALRAQVGTMPVGSKISLGLLR 370
>sp|Q92JA1|DEGPL_RICCN Probable periplasmic serine endoprotease DegP-like OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=htrA PE=3
SV=2
Length = 508
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 154/287 (53%), Gaps = 19/287 (6%)
Query: 116 GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKL 175
G+GFI + +G IVTN+HVI + + L D T L AK++G+D TDLA+L ID+ L
Sbjct: 118 GSGFIIEPNGLIVTNYHVIANVDKINIKLADNTELSAKLIGNDTKTDLALLKIDSE-EPL 176
Query: 176 RSIPVGVSANLRIGQKVYAIGHPLGR-KFTCTAGIISAFGLEPITATGPPIQGLIQIDAA 234
+ G S + R+G V AIG+P G T T+GIIS+ G + T + IQ DAA
Sbjct: 177 PFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDIDTDNIVDNFIQTDAA 236
Query: 235 INRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPY 294
IN GNSGGP+ + +IGVNT+I + G+ +IP +T I+++L K GK+ R
Sbjct: 237 INNGNSGGPMFNLDQKVIGVNTAIFSPLGTNIGIGFAIPSNTAKPIIERLKKDGKVSRGR 296
Query: 295 LGIAHDQLLEKL---MGISG--GVIFIAVEE-GPAGKAGLRSTKFGANGKFILGDIIKAV 348
LG+ L E + +G+ GV+ V+E GP KAG+++ GDII
Sbjct: 297 LGVTIQDLTEDISEGLGLKNTRGVLVAKVQEDGPGDKAGIKT-----------GDIIIEF 345
Query: 349 NGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDE 395
V N L I+ + EV V+ILR + E+ I + + +E
Sbjct: 346 ADIPVKNTKKLRVIIADAPIDQEVKVKILRDKKELELPIKITSDNEE 392
>sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5
PE=1 SV=3
Length = 323
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 128/227 (56%), Gaps = 20/227 (8%)
Query: 86 IFEENLPSVVHITNFGMNTFT----LTMEYP---QATGTGFIWDEDGHIVTNHHVIE--- 135
+F++ PSVV+I + + LT E + TG+GF+WD+ GHIVTN+HVI
Sbjct: 94 LFQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAKLA 153
Query: 136 ----GASSVKVTLFD----KTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLR 187
G KV+L D + + + K+VG D DLAVL I+ +L + +G S +LR
Sbjct: 154 TDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLR 213
Query: 188 IGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDS 247
+GQ +AIG+P G + T T G++S G E + G I IQ DA IN GNSGGPLLDS
Sbjct: 214 VGQSCFAIGNPYGYENTLTIGVVSGLGREIPSPNGKSISEAIQTDADINSGNSGGPLLDS 273
Query: 248 SGSLIGVNTSIITRTDA--FCGMACSIPIDTVSGIVDQLVKFGKIIR 292
G IGVNT+ TR + G+ +IPIDTV V L+ +G R
Sbjct: 274 YGHTIGVNTATFTRKGSGMSSGVNFAIPIDTVVRTVPYLIVYGTAYR 320
>sp|O05942|DEGPL_RICPR Probable periplasmic serine endoprotease DegP-like OS=Rickettsia
prowazekii (strain Madrid E) GN=htrA PE=3 SV=2
Length = 513
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 151/288 (52%), Gaps = 19/288 (6%)
Query: 116 GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKL 175
G+GFI +G IVTN+HVI + + L D T AK++G D TDLA+L ID+ L
Sbjct: 123 GSGFIIAPNGLIVTNYHVIANVEKINIKLADNTEFLAKLIGSDSKTDLALLKIDSE-EPL 181
Query: 176 RSIPVGVSANLRIGQKVYAIGHPLGR-KFTCTAGIISAFGLEPITATGPPIQGLIQIDAA 234
+ G S + R+G V AIG+P G T T+GIIS+ G + T + IQ DAA
Sbjct: 182 PFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDVDTDNIVDNFIQTDAA 241
Query: 235 INRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPY 294
IN GNSGGP+ + +IGVNT+I + G+ +IP +T I+++L K GK+ R
Sbjct: 242 INNGNSGGPMFNLDQKVIGVNTAIFSPLGTNIGIGFAIPSNTAKPIIERLKKDGKVSRGR 301
Query: 295 LGIAHDQLLEKL---MGISG--GVIFIAVEE-GPAGKAGLRSTKFGANGKFILGDIIKAV 348
LG+ L E++ +G G GV+ V+E GP KAG++ GDII
Sbjct: 302 LGVTIQDLTEEISEVLGFKGTNGVLVSKVQENGPGYKAGIKK-----------GDIIIKF 350
Query: 349 NGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPDEA 396
V N L I+ + EV ++ILR Q E+ I + + +E
Sbjct: 351 GDRLVKNTKKLRVIIADTPINQEVKLKILRDAQELELPIKVTADNEEV 398
>sp|P44947|DEGS_HAEIN Serine endoprotease DegS OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=degS PE=3 SV=1
Length = 340
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 167/309 (54%), Gaps = 26/309 (8%)
Query: 92 PSVVHITNFGMNTFTLTME---YPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKT 148
P+VV++ N ++ ++ G+G I +DG+I+TN H+I+ A + V L +
Sbjct: 49 PAVVNVYNRSFSSASINDNDQLQVNNLGSGVIMSKDGYILTNKHLIQNADQIVVALQNGN 108
Query: 149 TLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAG 208
+A +VG D TDLAVL I A N L +IP + +G V AIG+P + + G
Sbjct: 109 IFEASLVGSDDLTDLAVLKIRADN--LSTIPQNSARQAHVGDVVLAIGNPYNLGQSVSQG 166
Query: 209 IISAFGLEPITATGPPI--QGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRT--DA 264
IISA G A G + Q IQ DA+INRGNSGG L++S+G L+G++T I +T +
Sbjct: 167 IISAIGR---NAVGDSVGRQNFIQTDASINRGNSGGALINSAGELVGISTLSIGKTANEI 223
Query: 265 FCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHDQLLEKLMGISGGVIFIAVEEGPAG 324
G+ +IPID + ++ ++++ G++IR Y G+ D GI VI PA
Sbjct: 224 AEGLNFAIPIDIANDVLRKIMRDGRVIRGYFGVQSDISSSSEEGI---VITDVSPNSPAA 280
Query: 325 KAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEE 384
K+G++ +GD+I +N ++ +A ++ I+ K +V+V ILR ++ +
Sbjct: 281 KSGIQ-----------VGDVILKLNNQEGISAREMMQIIANTKPNSKVLVTILRLGKILQ 329
Query: 385 ILIILEVEP 393
I +++E P
Sbjct: 330 IPVVIEEFP 338
>sp|P57322|DEGP_BUCAI Probable serine protease do-like OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=degP PE=3 SV=1
Length = 478
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 159/288 (55%), Gaps = 21/288 (7%)
Query: 110 EYPQATGTGFIWDED-GHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHI 168
E +A G+G I + D G+ VTN+HV+E A+ ++V L D +A+V+G D +D+A++ +
Sbjct: 110 EKFRALGSGVIINADKGYAVTNNHVVENANKIQVQLSDGRRYEARVIGKDSRSDIALIQL 169
Query: 169 DAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGL 228
N+ L I + S NLR+G AIG+P G T T+GIISA G + +
Sbjct: 170 KNANN-LSEIKIADSDNLRVGDYTVAIGNPYGLGETVTSGIISALGRSGLNIE--HYENF 226
Query: 229 IQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFG 288
IQ DAAINRGNSGG L++ G LIG+NT+I+ G+ +IP + V + Q+V+FG
Sbjct: 227 IQTDAAINRGNSGGALVNLKGELIGINTAILAPDGGNIGIGFAIPCNMVKNLTAQMVQFG 286
Query: 289 KIIRPYLGIAHDQL---LEKLMGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFILG 342
++ R LGI +L L ++M I+ G + + A +AG+++ G
Sbjct: 287 QVRRGELGIMGMELNSDLAQIMKINSQKGAFVSRVLPNSSAFEAGIKA-----------G 335
Query: 343 DIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILE 390
DII ++N + +S+ + L + V ++ + + R +++ I + L+
Sbjct: 336 DIIISLNRKPISSFSSLRAEIGSLPVATKMELGVFREGRIKNITVELK 383
>sp|P39099|DEGQ_ECOLI Periplasmic pH-dependent serine endoprotease DegQ OS=Escherichia
coli (strain K12) GN=degQ PE=1 SV=1
Length = 455
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 155/285 (54%), Gaps = 21/285 (7%)
Query: 113 QATGTGFIWD-EDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171
+ G+G I + G+++TN+HVI A + + L D DAK++G D +D+A+L I P
Sbjct: 89 EGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNP 148
Query: 172 NHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQI 231
+ KL I + S LR+G A+G+P G T T+GI+SA G + G ++ IQ
Sbjct: 149 S-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEG--LENFIQT 205
Query: 232 DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKII 291
DA+INRGNSGG LL+ +G LIG+NT+I+ G+ +IP + + QL+ FG+I
Sbjct: 206 DASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK 265
Query: 292 RPYLGIAHDQLLEKL-----MGISGGVIFIAVEEGP-AGKAGLRSTKFGANGKFILGDII 345
R LGI ++ + + + G V G + KAG+++ GDII
Sbjct: 266 RGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDII 314
Query: 346 KAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILE 390
++NG+ +++ +L + + + G +V + +LR + E+ + L+
Sbjct: 315 TSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLD 359
>sp|P0AEE3|DEGS_ECOLI Serine endoprotease DegS OS=Escherichia coli (strain K12) GN=degS
PE=1 SV=1
Length = 355
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 139/250 (55%), Gaps = 18/250 (7%)
Query: 92 PSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLD 151
P+VV++ N G+NT + + G+G I D+ G+I+TN HVI A + V L D +
Sbjct: 56 PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFE 115
Query: 152 AKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIIS 211
A +VG D TDLAVL I+A L +IP+ IG V AIG+P T T GIIS
Sbjct: 116 ALLVGSDSLTDLAVLKINA-TGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIIS 174
Query: 212 AFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRT---DAFCGM 268
A G + TG Q +Q DA+IN GNSGG L++S G L+G+NT ++ + G+
Sbjct: 175 ATGRIGLNPTGR--QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGI 232
Query: 269 ACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHDQL---------LEKLMGISGGVIFIAVE 319
+IP + I+D+L++ G++IR Y+GI ++ +++L GI V+
Sbjct: 233 GFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGI---VVNEVSP 289
Query: 320 EGPAGKAGLR 329
+GPA AG++
Sbjct: 290 DGPAANAGIQ 299
>sp|P0AEE4|DEGS_ECO57 Serine endoprotease DegS OS=Escherichia coli O157:H7 GN=degS PE=3
SV=1
Length = 355
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 139/250 (55%), Gaps = 18/250 (7%)
Query: 92 PSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLD 151
P+VV++ N G+NT + + G+G I D+ G+I+TN HVI A + V L D +
Sbjct: 56 PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFE 115
Query: 152 AKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIIS 211
A +VG D TDLAVL I+A L +IP+ IG V AIG+P T T GIIS
Sbjct: 116 ALLVGSDSLTDLAVLKINA-TGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIIS 174
Query: 212 AFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRT---DAFCGM 268
A G + TG Q +Q DA+IN GNSGG L++S G L+G+NT ++ + G+
Sbjct: 175 ATGRIGLNPTGR--QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGI 232
Query: 269 ACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHDQL---------LEKLMGISGGVIFIAVE 319
+IP + I+D+L++ G++IR Y+GI ++ +++L GI V+
Sbjct: 233 GFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGI---VVNEVSP 289
Query: 320 EGPAGKAGLR 329
+GPA AG++
Sbjct: 290 DGPAANAGIQ 299
>sp|Q9LA06|HTRA_LACLA Serine protease Do-like HtrA OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=htrA PE=1 SV=1
Length = 408
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 150/287 (52%), Gaps = 37/287 (12%)
Query: 116 GTGFIWDE---DGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
G+G I+ + D ++VTN+HVI G SS+ V L + A VVG+D+ TDLAVL I +
Sbjct: 108 GSGVIYKKSGGDAYVVTNYHVIAGNSSLDVLLSGGQKVKASVVGYDEYTDLAVLKISSE- 166
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKF--TCTAGIISAFGLEPITATGPPIQ---- 226
H S+ L IG+ A+G PLG +F T T GI+SA + +T T Q
Sbjct: 167 HVKDVATFADSSKLTIGEPAIAVGSPLGSQFANTATEGILSATSRQ-VTLTQENGQTTNI 225
Query: 227 GLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTD----AFCGMACSIPIDTVSGIVD 282
IQ DAAIN GNSGG L++ G +IG+ S IT T+ + G+ +IP + V I++
Sbjct: 226 NAIQTDAAINPGNSGGALINIEGQVIGITQSKITTTEDGSTSVEGLGFAIPSNDVVNIIN 285
Query: 283 QLVKFGKIIRPYLGI---------AHDQLLEKL-MGISGGVIFIAVEEG-PAGKAGLRST 331
+L GKI RP LGI +D KL ++GGV+ +V+ G PA AGL++
Sbjct: 286 KLEADGKISRPALGIRMVDLSQLSTNDSSQLKLPSSVTGGVVVYSVQSGLPAASAGLKA- 344
Query: 332 KFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILR 378
GD+I V V+++ DL + L + D V V R
Sbjct: 345 ----------GDVITKVGDTAVTSSTDLQSALYSHNINDTVKVTYYR 381
>sp|A2RNT9|HTRA_LACLM Serine protease Do-like HtrA OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=htrA PE=3 SV=1
Length = 407
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 151/287 (52%), Gaps = 37/287 (12%)
Query: 116 GTGFIWDE---DGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172
G+G I+ + D ++VTN+HVI G SS+ V L + A VVG+D+ TDLAVL I + +
Sbjct: 107 GSGVIYKKSGGDAYVVTNYHVIAGNSSLDVLLSGGQKVKATVVGYDEYTDLAVLKI-SSD 165
Query: 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKF--TCTAGIISAFGLEPITATGPPIQ---- 226
H S+ L IG+ A+G PLG +F T T GI+SA + +T T Q
Sbjct: 166 HVKDVATFADSSKLTIGEPAIAVGSPLGSQFANTATEGILSATSRQ-VTLTQENGQTTSI 224
Query: 227 GLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTD----AFCGMACSIPIDTVSGIVD 282
IQ DAAIN GNSGG L++ G +IG+ S IT T+ + G+ +IP + V I++
Sbjct: 225 NAIQTDAAINPGNSGGALINIEGQVIGITQSKITTTEDGSTSVEGLGFAIPSNDVVNIIN 284
Query: 283 QLVKFGKIIRPYLGI---------AHDQLLEKL-MGISGGVIFIAVEEG-PAGKAGLRST 331
+L GKI RP LGI +D KL ++GGV+ +V+ G PA AGL++
Sbjct: 285 KLETDGKISRPALGIRMVDLSQLSTNDSSQLKLPSSVTGGVVVYSVQAGLPAATAGLKA- 343
Query: 332 KFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILR 378
GD+I V V+++ DL + L + D V V R
Sbjct: 344 ----------GDVITKVGDTAVTSSTDLQSALYSHNINDTVKVTYYR 380
>sp|O85291|DEGPL_BUCAP Probable periplasmic serine endoprotease DegP-like OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=htrA PE=3 SV=1
Length = 478
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 156/292 (53%), Gaps = 25/292 (8%)
Query: 110 EYPQATGTGFIWDED-GHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHI 168
E A G+G I + D + VTN+HV+E A+ ++V L D +A ++G D +D+A++ +
Sbjct: 110 EKFHALGSGVIINADKAYAVTNNHVVENANKIQVQLSDGRRYEASIIGKDSRSDIALIQL 169
Query: 169 -DAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQG 227
+A N L +I + S LR+G AIG+P G T T+GIISA G + +
Sbjct: 170 KNAKN--LSAIKIADSDTLRVGDYTVAIGNPYGLGETVTSGIISALGRSGLNI--EHYEN 225
Query: 228 LIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287
IQ DAAINRGNSGG L++ G LIG+NT+I+ G+ +IP + V + +Q+VKF
Sbjct: 226 FIQTDAAINRGNSGGALVNLKGELIGINTAILAPDGGNIGIGFAIPGNMVKNLTEQMVKF 285
Query: 288 GKIIRPYLGIAHDQL---LEKLMGIS---GGVIFIAVEEGPAGKAGLRSTKFGANGKFIL 341
G++ R LGI +L L +M I+ G + + A AG+++
Sbjct: 286 GQVKRGELGIIGMELNSDLAHVMKINAQKGAFVSQVLPNSSAFHAGIKA----------- 334
Query: 342 GDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEP 393
GDII ++N + +S+ L + V ++ + I R + +I+E++P
Sbjct: 335 GDIIVSLNKKTISSFAALRAEVGSLPVSTKMELGIFRNGITKN--VIVELKP 384
>sp|Q6GMI0|HTR1A_DANRE Serine protease HTRA1A OS=Danio rerio GN=htra1a PE=2 SV=1
Length = 479
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 171/335 (51%), Gaps = 52/335 (15%)
Query: 84 AGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVT 143
A + E+ P+VVHI + ++ E A+G+GF+ +DG IVTN HV+ + VKV
Sbjct: 172 ADVVEKIAPAVVHIELYRKMVYS-KREMAVASGSGFVVSDDGLIVTNAHVVANKNRVKVE 230
Query: 144 LFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKF 203
L + + DAK+ D+ D+A++ ID PN KL + +G SA+LR G+ V AIG P +
Sbjct: 231 LKNGASYDAKIKDVDEKADIALIKIDLPN-KLPVLLLGRSADLRPGEFVVAIGSPFSLQN 289
Query: 204 TCTAGIISAFGLEPITATGPPIQGL-------IQIDAAINRGNSGGPLLDSSGSLIGVNT 256
T T GI+S T G GL IQ DA IN GNSGGPL++ G +IG+NT
Sbjct: 290 TVTTGIVST------TQRGGKELGLRNSDMDYIQTDAIINYGNSGGPLVNLDGEVIGINT 343
Query: 257 SIITRTDAFCGMACSIPIDTVSGIV----DQLVK-FGKIIRPYLGIAH----DQLLEKLM 307
+T G++ +IP D + + D+L + G + Y+G+ L ++L
Sbjct: 344 LKVT-----AGISFAIPSDKIRQFLAESYDRLARGRGTTKKRYIGVRMMTLTPSLSKELK 398
Query: 308 G--------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDL 359
G SG + + + PA GL+ D+I ++NG+ +S A D+
Sbjct: 399 GRLRDFPDITSGAYVIEVISKTPAAAGGLKEH-----------DVIISINGQRISTATDV 447
Query: 360 HNILDQCKVGDEVIVRILRGTQLEEILIILEVEPD 394
I+ + + V+VR RG + + IL I+ +E D
Sbjct: 448 SAIIKK-ESSLRVVVR--RGNE-DIILTIIPMEID 478
>sp|A9JRB3|HTR1B_DANRE Serine protease HTRA1B OS=Danio rerio GN=htra1b PE=2 SV=1
Length = 476
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 163/336 (48%), Gaps = 55/336 (16%)
Query: 84 AGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVT 143
A + E+ P+VVHI F N F E A+G+GF+ EDG IVTN HV+ VKV
Sbjct: 170 ADVVEKIAPAVVHIELFRKNVFN--REVAVASGSGFVVSEDGLIVTNAHVVANKHRVKVE 227
Query: 144 LFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKF 203
L TT DAK+ D+ D+A++ IDAP KL + +G SA+LR G+ V AIG P +
Sbjct: 228 LKTGTTYDAKIKDVDEKADIALIKIDAP-MKLPVLLLGRSADLRPGEFVVAIGSPFSLQN 286
Query: 204 TCTAGIISAFGLEPITATGPPIQGL-------IQIDAAINRGNSGGPLLDSSGSLIGVNT 256
T T GI+S T G GL IQ DA IN GNSGGPL++ G +IG+NT
Sbjct: 287 TVTTGIVST------TQRGGKELGLRNSDMDYIQTDAIINYGNSGGPLVNLDGEVIGINT 340
Query: 257 SIITRTDAFCGMACSIPIDTVSGIV-----DQLVKFGKIIRPYLGIAHDQLLEKLMG--- 308
+T G++ +IP D + + Q + Y+G+ L L
Sbjct: 341 LKVT-----AGISFAIPSDKIRQFLAESHDRQAKGKTATKKKYIGVRMMTLTPTLAKELK 395
Query: 309 ---------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDL 359
SG + + + PA GL+ + D+I ++NG+ +++A+D+
Sbjct: 396 QRKNDFPDVTSGAYVIEVIPKTPAEVGGLKES-----------DVIISINGQRITSASDV 444
Query: 360 HNILDQCKVGDEVIVRILRGTQLEEILIIL--EVEP 393
+ DE + ++R + IL I+ E++P
Sbjct: 445 STAIKT----DESLRAVVRRGNEDIILTIIPEEIDP 476
>sp|Q92743|HTRA1_HUMAN Serine protease HTRA1 OS=Homo sapiens GN=HTRA1 PE=1 SV=1
Length = 480
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 152/307 (49%), Gaps = 50/307 (16%)
Query: 84 AGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVT 143
A + E+ P+VVHI F F+ E P A+G+GFI EDG IVTN HV+ VKV
Sbjct: 173 ADVVEKIAPAVVHIELFRKLPFS-KREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVE 231
Query: 144 LFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKF 203
L + T +AK+ D+ D+A++ ID KL + +G S+ LR G+ V AIG P +
Sbjct: 232 LKNGATYEAKIKDVDEKADIALIKIDH-QGKLPVLLLGRSSELRPGEFVVAIGSPFSLQN 290
Query: 204 TCTAGIISAFGLEPITATGPPIQGL-------IQIDAAINRGNSGGPLLDSSGSLIGVNT 256
T T GI+S T G GL IQ DA IN GNSGGPL++ G +IG+NT
Sbjct: 291 TVTTGIVST------TQRGGKELGLRNSDMDYIQTDAIINYGNSGGPLVNLDGEVIGINT 344
Query: 257 SIITRTDAFCGMACSIPIDTVSGIV----DQLVKFGKII--RPYLGIAHDQLLEKLMG-- 308
+T G++ +IP D + + D+ K GK I + Y+GI L
Sbjct: 345 LKVT-----AGISFAIPSDKIKKFLTESHDRQAK-GKAITKKKYIGIRMMSLTSSKAKEL 398
Query: 309 ----------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAND 358
ISG I + + PA GL+ D+I ++NG+ V +AND
Sbjct: 399 KDRHRDFPDVISGAYIIEVIPDTPAEAGGLKEN-----------DVIISINGQSVVSAND 447
Query: 359 LHNILDQ 365
+ +++ +
Sbjct: 448 VSDVIKR 454
>sp|Q89AP5|DEGPL_BUCBP Probable periplasmic serine endoprotease DegP-like OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=htrA PE=3 SV=1
Length = 465
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 161/298 (54%), Gaps = 21/298 (7%)
Query: 100 FGMNTFTLTMEYPQATGTGFIWD-EDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD 158
FG++ A G+G I D ++G+IVTN HV++ A+ ++V L + +A V+G D
Sbjct: 86 FGISRCMTRQGKFHALGSGVILDSKNGYIVTNSHVVDRANKIQVQLSNGCKHEAVVIGKD 145
Query: 159 QGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPI 218
D+A++ + + L I + S L++G V AIG+P G T T+GIISA +
Sbjct: 146 ARFDIAIIKLKKVKN-LHEIKMSNSDILKVGDYVIAIGNPYGLGETVTSGIISALHRSGL 204
Query: 219 TATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVS 278
+ IQ DAAINRGNSGG L++ G LIG+NT+I+T G+ +IPI+ V+
Sbjct: 205 NIEN--YENFIQTDAAINRGNSGGALVNLKGELIGINTAILTPDGGNIGIGFAIPINMVN 262
Query: 279 GIVDQLVKFGKIIRPYLGIAHDQL---LEKLMGIS---GGVIFIAVEEGPAGKAGLRSTK 332
+ Q++++G++ + LGI +L L K++ I+ G I + + PA +G++
Sbjct: 263 NLTTQILEYGQVKQNELGIVGMELNSDLAKVLKINVHRGAFISQVLSKSPADVSGIKP-- 320
Query: 333 FGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILE 390
GD+I +N + +++ L + + ++ + ILR +++ I++ L+
Sbjct: 321 ---------GDVIILLNRKPIASFATLRAEIASFPIKTKIELGILRNKKVKFIIVELK 369
>sp|Q9QZK5|HTRA1_RAT Serine protease HTRA1 OS=Rattus norvegicus GN=Htra1 PE=2 SV=1
Length = 480
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 50/307 (16%)
Query: 84 AGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVT 143
A + E+ P+VVHI + F+ E P A+G+GFI EDG IVTN HV+ + VKV
Sbjct: 173 ADVVEKIAPAVVHIELYRKLPFS-KREVPVASGSGFIVSEDGLIVTNAHVVTNKNRVKVE 231
Query: 144 LFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKF 203
L + T +AK+ D+ D+A++ ID KL + +G S+ LR G+ V AIG P +
Sbjct: 232 LKNGATYEAKIKDVDEKADIALIKIDH-QGKLPVLLLGRSSELRPGEFVVAIGSPFSLQN 290
Query: 204 TCTAGIISAFGLEPITATGPPIQGL-------IQIDAAINRGNSGGPLLDSSGSLIGVNT 256
T T GI+S T G GL IQ DA IN GNSGGPL++ G +IG+NT
Sbjct: 291 TVTTGIVST------TQRGGKELGLRNSDMDYIQTDAIINYGNSGGPLVNLDGEVIGINT 344
Query: 257 SIITRTDAFCGMACSIPIDTVSGIV----DQLVKFGKII--RPYLGIAHDQLLEKLMG-- 308
+T G++ +IP D + + D+ K GK + + Y+GI L
Sbjct: 345 LKVT-----AGISFAIPSDKIKKFLTESHDRQAK-GKTVTKKKYIGIRMMSLTSSKAKEL 398
Query: 309 ----------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAND 358
ISG I + + PA GL+ D+I ++NG+ V AND
Sbjct: 399 KDRHRDFPDVISGAYIIEVIPDTPAEAGGLKEN-----------DVIISINGQSVVTAND 447
Query: 359 LHNILDQ 365
+ +++ +
Sbjct: 448 VSDVIKK 454
>sp|F1N152|HTRA1_BOVIN Serine protease HTRA1 OS=Bos taurus GN=HTRA1 PE=2 SV=1
Length = 487
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 152/307 (49%), Gaps = 50/307 (16%)
Query: 84 AGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVT 143
A + E+ P+VVHI F F+ E P A+G+GFI EDG IVTN HV+ VKV
Sbjct: 180 ADVVEKIAPAVVHIELFRKLPFS-KREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVE 238
Query: 144 LFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKF 203
L + T +AK+ D+ D+A++ ID KL + +G S+ LR G+ V AIG P +
Sbjct: 239 LKNGATYEAKIKDVDEKADIALIKIDH-QGKLPVLLLGRSSELRPGEFVVAIGSPFSLQN 297
Query: 204 TCTAGIISAFGLEPITATGPPIQGL-------IQIDAAINRGNSGGPLLDSSGSLIGVNT 256
T T GI+S T G GL IQ DA IN GNSGGPL++ G +IG+NT
Sbjct: 298 TVTTGIVST------TQRGGKELGLRNSDMDYIQTDAIINYGNSGGPLVNLDGEVIGINT 351
Query: 257 SIITRTDAFCGMACSIPIDTVSGIV----DQLVKFGKII--RPYLGIAHDQLLEKLMG-- 308
+T G++ +IP D + + D+ K GK I + Y+GI L
Sbjct: 352 LKVT-----AGISFAIPSDKIKKFLTESHDRQAK-GKAITKKKYIGIRMMSLTPSKAKEL 405
Query: 309 ----------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAND 358
+SG I + + PA GL+ D+I ++NG+ V +AND
Sbjct: 406 KDRHRDFPDVLSGAYIIEVIPDTPAEAGGLKEN-----------DVIISINGQSVVSAND 454
Query: 359 LHNILDQ 365
+ +++ +
Sbjct: 455 VSDVIKK 461
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,306,914
Number of Sequences: 539616
Number of extensions: 6706115
Number of successful extensions: 15606
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 15125
Number of HSP's gapped (non-prelim): 252
length of query: 397
length of database: 191,569,459
effective HSP length: 120
effective length of query: 277
effective length of database: 126,815,539
effective search space: 35127904303
effective search space used: 35127904303
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)