Query 015960
Match_columns 397
No_of_seqs 467 out of 3248
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 05:30:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qo6_A Protease DO-like 1, chl 100.0 1.2E-56 4.1E-61 438.2 27.4 322 74-395 10-336 (348)
2 3stj_A Protease DEGQ; serine p 100.0 4.4E-55 1.5E-59 425.8 31.4 301 81-395 13-337 (345)
3 4a8c_A Periplasmic PH-dependen 100.0 6E-53 2.1E-57 423.4 36.5 302 79-394 11-336 (436)
4 1te0_A Protease DEGS; two doma 100.0 3.9E-52 1.4E-56 401.6 28.0 302 79-394 7-317 (318)
5 3pv2_A DEGQ; trypsin fold, PDZ 100.0 3.3E-52 1.1E-56 419.0 27.3 300 79-393 17-354 (451)
6 4fln_A Protease DO-like 2, chl 100.0 6.7E-51 2.3E-55 413.0 31.1 289 89-394 45-359 (539)
7 1y8t_A Hypothetical protein RV 100.0 7.4E-50 2.5E-54 386.8 30.8 291 81-395 6-317 (324)
8 1ky9_A Protease DO, DEGP, HTRA 100.0 1E-50 3.4E-55 407.9 23.9 297 82-392 14-357 (448)
9 1lcy_A HTRA2 serine protease; 100.0 3.6E-49 1.2E-53 381.8 24.1 290 81-391 15-323 (325)
10 3num_A Serine protease HTRA1; 100.0 5E-49 1.7E-53 382.1 20.0 297 77-394 10-324 (332)
11 3sti_A Protease DEGQ; serine p 100.0 5.7E-39 1.9E-43 297.6 18.6 211 81-294 13-241 (245)
12 1l1j_A Heat shock protease HTR 100.0 2.3E-39 7.8E-44 299.6 14.8 216 81-297 4-239 (239)
13 3lgi_A Protease DEGS; stress-s 100.0 1.6E-37 5.5E-42 287.3 21.7 214 79-295 18-234 (237)
14 3tjo_A Serine protease HTRA1; 100.0 4.5E-35 1.6E-39 269.7 18.2 202 78-286 28-230 (231)
15 3k6y_A Serine protease, possib 100.0 1E-30 3.6E-35 241.5 20.0 197 81-291 31-231 (237)
16 2w5e_A Putative serine proteas 99.9 2.7E-24 9.2E-29 186.4 18.2 138 112-274 19-156 (163)
17 2as9_A Serine protease; trypsi 99.9 7.4E-24 2.5E-28 191.9 14.4 158 113-285 22-202 (210)
18 1agj_A Epidermolytic toxin A; 99.9 1.5E-22 5E-27 187.3 15.9 161 113-284 54-240 (242)
19 2h5c_A Alpha-lytic protease; s 99.9 2.9E-21 9.9E-26 173.0 15.2 158 115-281 17-191 (198)
20 2w7s_A Serine protease SPLA; h 99.9 8.8E-22 3E-26 176.7 9.9 155 114-284 22-197 (200)
21 2o8l_A V8 protease, taphylococ 99.8 5E-20 1.7E-24 173.5 18.3 172 91-286 19-211 (274)
22 2l97_A HTRA, putative serine p 99.8 2.3E-21 7.9E-26 162.9 7.3 116 266-393 2-128 (134)
23 2vid_A Serine protease SPLB; h 99.8 5.7E-20 1.9E-24 165.0 15.1 157 114-285 22-202 (204)
24 1wcz_A Glutamyl endopeptidase; 99.8 1E-19 3.4E-24 170.9 16.7 157 114-286 34-211 (268)
25 1qtf_A Exfoliative toxin B; se 99.8 1.2E-20 4.3E-25 174.8 9.1 144 113-278 47-216 (246)
26 2oua_A Serine protease, protei 99.8 2.5E-19 8.7E-24 159.1 14.2 155 114-280 14-181 (188)
27 2qa9_E Streptogrisin-B; chymot 99.8 1.6E-19 5.3E-24 160.1 12.9 162 114-282 12-181 (185)
28 1hpg_A Glutamic acid specific 99.8 3E-19 1E-23 158.6 13.6 158 115-281 13-182 (187)
29 2ea3_A Chymotrypsin; celloulom 99.8 2.4E-18 8.2E-23 152.8 13.7 150 115-280 17-175 (189)
30 2pfe_A Protease A, alkaline se 99.8 2.1E-18 7.2E-23 152.7 10.4 150 117-280 18-178 (186)
31 2sga_A Proteinase A; hydrolase 99.7 4.5E-18 1.5E-22 150.2 8.5 154 114-281 12-176 (181)
32 1mbm_A NSP4 proteinase, chymot 99.7 1.1E-17 3.7E-22 143.5 8.5 126 90-257 2-130 (198)
33 3fan_A Non-structural protein; 99.6 1.2E-15 4.2E-20 133.0 8.7 131 89-259 16-146 (213)
34 1pq7_A Trypsin; ultra-high res 99.6 7E-14 2.4E-18 127.2 18.0 169 114-284 24-223 (224)
35 2zch_P Prostate-specific antig 99.6 5.2E-13 1.8E-17 122.4 22.0 170 113-286 23-234 (237)
36 1fuj_A PR3, myeloblastin; hydr 99.6 7.1E-13 2.4E-17 120.1 22.0 164 113-285 26-220 (221)
37 1fxy_A Coagulation factor XA-t 99.5 5.3E-13 1.8E-17 121.7 20.8 169 113-286 24-225 (228)
38 3s69_A Thrombin-like enzyme de 99.5 5.1E-13 1.7E-17 122.0 20.7 173 113-288 23-227 (234)
39 3s9c_A Vipera russelli protein 99.5 3.5E-13 1.2E-17 123.2 19.4 171 114-289 26-228 (234)
40 4e7n_A Snake-venom thrombin-li 99.5 4.5E-13 1.5E-17 122.6 20.1 173 113-288 25-231 (238)
41 1npm_A Neuropsin; serine prote 99.5 4.1E-13 1.4E-17 122.2 19.2 166 114-285 24-224 (225)
42 1p3c_A Glutamyl-endopeptidase; 99.5 5.3E-14 1.8E-18 127.1 12.6 160 113-285 29-213 (215)
43 1lo6_A Kallikrein 6, HK6; seri 99.5 6.8E-13 2.3E-17 120.6 20.0 167 114-286 24-221 (223)
44 2z7f_E Leukocyte elastase; ser 99.5 3.8E-13 1.3E-17 121.8 18.2 163 114-285 24-217 (218)
45 2xw9_A Complement factor D; im 99.5 5.7E-13 2E-17 121.3 19.5 170 114-285 24-227 (228)
46 2bdg_A Kallikrein-4; serine pr 99.5 1.1E-12 3.8E-17 119.2 21.2 169 113-286 23-222 (223)
47 1ton_A Tonin; hydrolase(serine 99.5 8.9E-13 3.1E-17 120.7 20.4 168 114-286 22-232 (235)
48 1a7s_A Heparin binding protein 99.5 1.3E-12 4.3E-17 118.8 21.1 165 114-288 24-220 (225)
49 1hj8_A Trypsin I; hydrolase, r 99.5 1.4E-12 4.7E-17 118.5 21.3 167 114-286 23-220 (222)
50 2psx_A Kallikrein-5; zinc inhi 99.5 1.4E-12 4.9E-17 118.8 21.3 167 114-286 25-224 (227)
51 2aiq_A Protein C activator; sn 99.5 4.4E-13 1.5E-17 122.5 17.7 169 114-287 23-223 (231)
52 1gvz_A Kallikrein-1E2; antigen 99.5 3.9E-13 1.3E-17 123.3 17.3 168 114-286 24-234 (237)
53 4i8h_A Cationic trypsin, beta- 99.5 1.3E-12 4.6E-17 118.4 20.5 166 114-286 23-221 (223)
54 1orf_A Granzyme A; hydrolase-h 99.5 2.4E-12 8.1E-17 117.8 22.3 171 113-286 23-231 (234)
55 1ao5_A Glandular kallikrein-13 99.5 8.2E-13 2.8E-17 121.1 19.2 167 114-286 24-234 (237)
56 3mfj_A Cationic trypsin; serin 99.5 1.9E-12 6.5E-17 117.7 21.4 167 114-286 23-221 (223)
57 1azz_A Collagenase; complex (s 99.5 5E-13 1.7E-17 121.8 17.5 168 113-286 23-223 (226)
58 4ag1_A Chymase; hydrolase-de n 99.5 2.7E-12 9.2E-17 116.6 22.3 182 91-286 12-224 (226)
59 1bru_P Elastase, PPE; serine p 99.5 1.6E-12 5.4E-17 119.6 20.9 172 114-286 28-239 (241)
60 1eq9_A Chymotrypsin; FIRE ANT, 99.5 2E-13 6.8E-18 124.1 14.6 167 114-285 24-220 (222)
61 1mza_A Pro-granzyme K; apoptos 99.5 1.4E-12 4.6E-17 119.8 20.3 171 113-286 25-235 (240)
62 1cgh_A Cathepsin G; inflammati 99.5 2.4E-12 8.1E-17 117.1 21.7 166 114-286 27-223 (224)
63 1iau_A Granzyme B; hydrolase-h 99.5 7.1E-13 2.4E-17 120.8 18.2 166 114-286 27-225 (227)
64 1gvk_B Elastase 1, peptide inh 99.5 1.3E-12 4.4E-17 120.1 20.0 172 114-286 28-238 (240)
65 1elt_A Elastase; serine protei 99.5 8.6E-13 2.9E-17 120.9 17.9 170 114-284 28-235 (236)
66 3fzz_A Granzyme C; hydrolase, 99.5 1.9E-12 6.6E-17 117.6 19.7 182 91-286 12-226 (227)
67 3rp2_A RAT MAST cell protease 99.5 2.8E-12 9.7E-17 116.2 20.7 181 91-285 12-223 (224)
68 2zgc_A Granzyme M; serine prot 99.5 2.3E-12 7.8E-17 118.5 20.2 173 114-287 24-230 (240)
69 1sgf_A 7S NGF, nerve growth fa 99.5 1.1E-12 3.8E-17 120.5 18.0 169 113-286 26-237 (240)
70 1si5_H Scatter factor, hepatoc 99.5 7.6E-12 2.6E-16 114.9 23.5 174 113-288 22-229 (240)
71 2qxi_A Kallikrein-7; S1 pocket 99.5 1.4E-12 4.6E-17 118.7 18.2 166 115-286 25-221 (224)
72 2pzd_A Serine protease HTRA2; 99.5 5.4E-14 1.9E-18 114.1 7.8 92 288-393 1-104 (113)
73 3gov_B MAsp-1; complement, ser 99.5 4.6E-12 1.6E-16 116.6 21.8 171 113-286 24-248 (251)
74 1spj_A Kallikrein 1; serine pr 99.5 2.2E-12 7.7E-17 118.2 19.2 167 114-286 24-235 (238)
75 3h7t_A Group 3 allergen smipp- 99.5 1.2E-12 4.2E-17 119.3 17.3 171 113-287 23-230 (235)
76 2asu_B Hepatocyte growth facto 99.5 4.7E-12 1.6E-16 115.8 20.8 171 113-286 21-226 (234)
77 2hlc_A Collagenase; serine pro 99.5 2.4E-12 8.2E-17 117.4 18.5 172 113-286 27-227 (230)
78 3ncl_A Suppressor of tumorigen 99.5 7.5E-12 2.6E-16 114.7 21.7 169 114-285 25-239 (241)
79 1aut_C Activated protein C; se 99.5 4.4E-12 1.5E-16 117.2 19.7 172 113-287 24-240 (250)
80 1m9u_A Earthworm fibrinolytic 99.5 1.8E-12 6.3E-17 119.0 17.0 170 114-284 27-240 (241)
81 2p3w_A Probable serine proteas 99.5 8.3E-14 2.8E-18 112.9 7.0 93 288-394 1-105 (112)
82 3beu_A Trypsin, SGT; beta shee 99.4 5.3E-12 1.8E-16 114.5 19.4 168 115-286 21-222 (224)
83 1ym0_A Fibrinotic enzyme compo 99.4 2.6E-12 8.8E-17 117.7 17.2 170 114-286 26-236 (238)
84 3h7o_A Group 3 allergen smipp- 99.4 2.1E-12 7.3E-17 117.3 16.5 169 115-287 27-227 (228)
85 3tvj_B Mannan-binding lectin s 99.4 4.4E-12 1.5E-16 116.1 18.7 172 114-286 22-240 (242)
86 2r0l_A Hepatocyte growth facto 99.4 1.2E-11 4.1E-16 114.0 21.6 173 113-287 22-240 (248)
87 1euf_A Duodenase; serine prote 99.4 4.7E-12 1.6E-16 115.3 18.6 166 114-286 27-224 (227)
88 1pyt_D TC, PCPA-TC, chymotryps 99.4 7.7E-12 2.6E-16 115.7 20.3 187 91-285 25-249 (251)
89 2f91_A Hepatopancreas trypsin; 99.4 6.7E-12 2.3E-16 115.0 19.2 167 115-284 29-235 (237)
90 2oq5_A Transmembrane protease, 99.4 1.3E-11 4.3E-16 112.7 21.0 170 114-285 24-230 (232)
91 2any_A Kininogenin, plasma kal 99.4 5.4E-12 1.9E-16 115.9 18.2 171 114-286 27-236 (241)
92 1ddj_A Plasminogen; catalytic 99.4 1.7E-11 6E-16 113.0 21.4 172 113-286 41-245 (247)
93 3bg8_A Coagulation factor XIA 99.4 4.4E-12 1.5E-16 116.3 17.2 171 114-286 27-236 (238)
94 1t8o_A Chymotrypsin A; chymotr 99.4 1.1E-11 3.8E-16 114.2 19.4 170 113-286 39-243 (245)
95 2jkh_A Activated factor XA hea 99.4 7.3E-12 2.5E-16 115.0 17.8 172 113-287 24-234 (241)
96 2i4s_A General secretion pathw 99.4 8.4E-14 2.9E-18 111.6 4.1 101 275-389 5-105 (105)
97 3gyl_B Prostasin; ENAC, zymoge 99.4 8.7E-12 3E-16 115.6 18.5 172 114-287 24-243 (261)
98 3mhw_U Urokinase-type plasmino 99.4 1.1E-11 3.7E-16 114.0 18.9 171 114-286 29-246 (247)
99 1rtf_B (TC)-T-PA, two chain ti 99.4 1.8E-11 6.3E-16 113.0 20.4 170 114-285 30-250 (252)
100 3i18_A LMO2051 protein; alpha- 99.4 1.6E-12 5.4E-17 103.1 11.1 74 309-394 6-79 (100)
101 1fon_A Procarboxypeptidase A-S 99.4 2E-12 6.9E-17 118.7 13.4 172 114-286 26-238 (240)
102 4dgj_A Enteropeptidase catalyt 99.4 6.2E-12 2.1E-16 114.9 16.4 170 114-285 24-234 (235)
103 1yc0_A Hepatocyte growth facto 99.4 1.6E-11 5.5E-16 115.6 19.7 172 113-286 57-274 (283)
104 2olg_A Pro-phenoloxidase activ 99.4 1.3E-11 4.6E-16 115.7 18.6 169 114-284 51-275 (278)
105 2kjp_A Uncharacterized protein 99.4 1.9E-13 6.6E-18 106.5 4.4 74 310-395 1-74 (91)
106 2qy0_B Complement C1R subcompo 99.4 8.8E-12 3E-16 114.4 15.9 169 114-286 22-239 (242)
107 2jde_A Urokinase-type plasmino 99.4 1.4E-11 4.8E-16 115.4 17.3 171 114-286 52-269 (276)
108 1fiw_A Beta-acrosin heavy chai 99.4 5.1E-11 1.8E-15 112.6 20.7 172 114-287 30-250 (290)
109 2f9n_A Alpha I tryptase; serin 99.4 1.3E-11 4.5E-16 113.6 15.6 171 114-286 27-242 (245)
110 2wph_S Coagulation factor IXA 99.4 3.3E-11 1.1E-15 110.1 18.2 170 113-285 23-232 (235)
111 3rm2_H Thrombin heavy chain; s 99.3 4.8E-11 1.7E-15 110.3 19.2 171 114-286 26-255 (259)
112 2bz6_H Blood coagulation facto 99.3 1.5E-11 5.1E-16 113.8 15.7 172 114-287 24-241 (254)
113 2kl1_A YLBL protein; structure 99.3 1.6E-12 5.4E-17 101.9 7.4 73 310-394 5-77 (94)
114 2bdy_A Thrombin; thrombin, com 99.3 3.4E-11 1.2E-15 113.7 18.0 171 114-286 56-285 (289)
115 3f1s_B Vitamin K-dependent pro 99.3 2.8E-11 9.5E-16 114.1 16.2 185 89-287 62-277 (283)
116 1z8g_A Serine protease hepsin; 99.3 4.2E-11 1.5E-15 117.2 18.1 173 113-287 140-361 (372)
117 2i6v_A General secretion pathw 99.3 2.5E-12 8.5E-17 99.2 7.4 69 310-389 19-87 (87)
118 3id1_A Regulator of sigma E pr 99.3 3.7E-12 1.3E-16 100.0 8.2 72 313-395 5-78 (95)
119 3cp7_A Alkaline serine proteas 99.3 1.3E-11 4.3E-16 112.0 12.7 176 91-284 6-214 (218)
120 4f4o_C Haptoglobin; globin fol 99.3 6.5E-11 2.2E-15 114.7 18.6 171 113-286 125-345 (347)
121 2b9l_A Prophenoloxidase activa 99.3 2.3E-11 7.8E-16 119.9 15.2 174 113-288 161-385 (394)
122 3h5c_B Vitamin K-dependent pro 99.3 8.1E-11 2.8E-15 112.6 16.9 182 90-285 104-316 (317)
123 1zjk_A Mannan-binding lectin s 99.3 8.7E-11 3E-15 116.2 17.5 172 114-286 183-401 (403)
124 1md8_A C1R complement serine p 99.3 6.8E-11 2.3E-15 113.8 16.3 169 114-286 111-328 (329)
125 2vz5_A TAX1-binding protein 3; 99.3 1.3E-12 4.6E-17 109.9 3.6 95 286-392 31-136 (139)
126 1zyo_A Serine protease; beta-b 99.3 4.1E-11 1.4E-15 105.6 13.0 161 91-280 15-185 (191)
127 1arb_A Achromobacter protease 99.3 5E-11 1.7E-15 111.3 13.2 147 89-260 20-214 (268)
128 1elv_A Complement C1S componen 99.2 1.8E-10 6.2E-15 110.9 17.3 168 115-287 104-326 (333)
129 2xxl_A GRAM-positive specific 99.2 2.5E-10 8.5E-15 113.0 18.1 172 114-287 146-374 (408)
130 2vnt_A Urokinase-type plasmino 99.2 4.1E-10 1.4E-14 105.2 18.7 189 91-287 35-270 (276)
131 2zpm_A Regulator of sigma E pr 99.2 3.2E-11 1.1E-15 93.6 7.0 69 312-392 6-74 (91)
132 1gpz_A Complement C1R componen 99.2 3.2E-10 1.1E-14 111.9 15.6 169 114-286 179-396 (399)
133 3nxp_A Prethrombin-1; alloster 99.2 1.4E-10 4.9E-15 115.4 12.8 172 113-286 190-420 (424)
134 4dur_A Plasminogen, serine pro 99.2 1.1E-09 3.7E-14 116.5 19.7 172 113-286 585-789 (791)
135 1uit_A Human discs large 5 pro 99.1 7.1E-12 2.4E-16 102.2 0.4 88 285-384 7-105 (117)
136 2eaq_A LIM domain only protein 99.1 4.9E-11 1.7E-15 92.4 4.4 72 293-381 17-90 (90)
137 3hrz_D Complement factor B; se 99.1 3.7E-10 1.3E-14 120.1 12.3 175 113-288 483-734 (741)
138 2pkt_A PDZ and LIM domain prot 99.1 7.7E-11 2.6E-15 91.4 4.7 61 310-383 27-89 (91)
139 1rrk_A Complement factor B; BB 99.1 4.8E-10 1.6E-14 113.6 12.0 176 113-289 241-493 (497)
140 2f83_A Coagulation factor XI; 99.1 1.8E-09 6.1E-14 112.6 15.6 171 113-285 413-622 (625)
141 2hga_A Conserved protein MTH13 99.1 5.3E-10 1.8E-14 92.1 9.3 68 309-392 24-91 (125)
142 1qau_A Neuronal nitric oxide s 99.0 3.8E-10 1.3E-14 91.0 7.6 72 310-393 26-100 (112)
143 2xrc_A Human complement factor 99.0 3.4E-09 1.2E-13 109.2 15.3 171 114-286 345-556 (565)
144 3cyy_A Tight junction protein 99.0 5E-10 1.7E-14 86.8 6.9 66 310-388 23-91 (92)
145 2vsp_A PDZ domain-containing p 99.0 2.6E-10 8.8E-15 88.5 5.2 61 310-383 27-89 (91)
146 2w4f_A Protein LAP4; structura 99.0 2.3E-10 8E-15 89.7 4.8 62 310-382 34-95 (97)
147 3mmg_A Nuclear inclusion prote 99.0 2.6E-08 9E-13 89.3 18.5 166 87-275 11-183 (241)
148 2v90_A PDZ domain-containing p 99.0 1.8E-10 6.2E-15 90.2 4.0 62 310-384 30-93 (96)
149 1wh1_A KIAA1095 protein; PDZ d 99.0 1.5E-10 5E-15 95.4 3.4 68 310-389 48-116 (124)
150 2odp_A Complement C2; C3/C5 co 99.0 8E-10 2.7E-14 112.4 8.9 172 114-286 247-501 (509)
151 2pa1_A PDZ and LIM domain prot 99.0 8.5E-10 2.9E-14 84.7 6.8 59 310-381 26-86 (87)
152 1w9e_A Syntenin 1; cell adhesi 99.0 4.7E-10 1.6E-14 97.1 5.8 81 291-388 14-95 (166)
153 2jil_A GRIP1 protein, glutamat 99.0 4.6E-10 1.6E-14 88.1 5.1 61 310-383 32-95 (97)
154 1x5q_A LAP4 protein; PDZ domai 99.0 4.4E-10 1.5E-14 90.4 4.9 63 310-383 46-108 (110)
155 3tsv_A Tight junction protein 99.0 7E-10 2.4E-14 91.3 6.2 62 310-382 51-114 (124)
156 1ihj_A INAD; intermolecular di 98.9 9.9E-10 3.4E-14 86.3 6.4 59 310-381 37-98 (98)
157 2dls_A PDZ-rhogef, RHO guanine 98.9 9.9E-10 3.4E-14 85.5 6.2 60 310-381 29-88 (93)
158 2uzc_A Human pdlim5, PDZ and L 98.9 1.5E-09 5.2E-14 83.4 6.6 59 310-381 27-87 (88)
159 2kom_A Partitioning defective 98.9 2.2E-09 7.4E-14 87.9 7.9 61 310-381 58-121 (121)
160 1uf1_A KIAA1526 protein; PDZ d 98.9 2.7E-10 9.1E-15 94.3 2.4 71 310-392 46-116 (128)
161 2jxo_A Ezrin-radixin-moesin-bi 98.9 4.9E-10 1.7E-14 88.1 3.7 60 310-381 33-94 (98)
162 2i04_A Membrane-associated gua 98.9 2.1E-09 7.2E-14 82.1 7.2 58 310-378 25-85 (85)
163 2he4_A Na(+)/H(+) exchange reg 98.9 1.3E-09 4.6E-14 84.2 6.1 59 310-381 28-88 (90)
164 3bpu_A Membrane-associated gua 98.9 2.2E-09 7.4E-14 82.6 7.2 59 310-381 27-87 (88)
165 2yub_A LIMK-2, LIM domain kina 98.9 3.3E-10 1.1E-14 92.4 2.6 63 310-385 44-110 (118)
166 3rle_A Golgi reassembly-stacki 98.9 8.2E-10 2.8E-14 99.3 5.3 70 310-390 16-86 (209)
167 4amh_A Disks large homolog 1; 98.9 3.2E-09 1.1E-13 84.8 7.9 69 310-391 32-104 (106)
168 2koj_A Partitioning defective 98.9 2.9E-09 9.9E-14 85.6 7.8 62 310-382 39-103 (111)
169 3khf_A Microtubule-associated 98.9 1.6E-09 5.5E-14 85.3 6.0 59 311-382 35-95 (99)
170 4fgm_A Aminopeptidase N family 98.9 3E-09 1E-13 109.9 9.1 73 310-394 496-568 (597)
171 1b8q_A Protein (neuronal nitri 98.9 6.6E-10 2.3E-14 91.8 3.3 69 310-390 33-104 (127)
172 1ueq_A Membrane associated gua 98.9 4.4E-09 1.5E-13 86.3 8.2 61 310-381 44-107 (123)
173 2eeh_A PDZ domain-containing p 98.9 1E-09 3.6E-14 86.6 4.2 74 292-382 21-96 (100)
174 2awx_A Synapse associated prot 98.9 1.8E-09 6.2E-14 86.0 5.6 69 310-391 33-104 (105)
175 2q3g_A PDZ and LIM domain prot 98.9 3.5E-09 1.2E-13 81.6 6.7 59 310-381 27-87 (89)
176 1vb7_A PDZ and LIM domain 2; P 98.9 6.1E-10 2.1E-14 86.9 2.4 60 310-382 30-91 (94)
177 2h2b_A Tight junction protein 98.9 3E-09 1E-13 84.9 6.4 61 310-382 39-99 (107)
178 1v5l_A PDZ and LIM domain 3; a 98.9 1.1E-09 3.7E-14 87.0 3.7 62 310-384 29-92 (103)
179 2jre_A C60-1 PDZ domain peptid 98.9 2.2E-09 7.7E-14 85.8 5.6 60 310-382 44-106 (108)
180 1v5q_A GRIP1 homolog, glutamat 98.9 2E-09 6.9E-14 88.2 5.4 62 310-382 45-109 (122)
181 1uep_A Membrane associated gua 98.9 1.7E-09 5.9E-14 85.8 4.8 61 310-381 34-97 (103)
182 1rgw_A ZAsp protein; PDZ, cyph 98.8 2.6E-09 8.7E-14 81.5 5.4 59 310-381 25-85 (85)
183 2f5y_A Regulator of G-protein 98.8 6.8E-09 2.3E-13 80.4 7.8 61 310-383 24-86 (91)
184 1wif_A RSGI RUH-020, riken cDN 98.8 2.3E-09 7.9E-14 88.2 5.1 59 310-379 49-110 (126)
185 1n7e_A AMPA receptor interacti 98.8 6.4E-09 2.2E-13 81.5 7.4 60 310-382 30-92 (97)
186 1d5g_A Human phosphatase HPTP1 98.8 7.1E-09 2.4E-13 81.0 7.6 59 310-381 33-94 (96)
187 2rcz_A Tight junction protein 98.8 5.3E-09 1.8E-13 78.8 6.6 58 310-380 21-81 (81)
188 2o2t_A Multiple PDZ domain pro 98.8 6.8E-10 2.3E-14 90.3 1.6 62 310-384 49-114 (117)
189 1wf7_A Enigma homologue protei 98.8 6.7E-10 2.3E-14 88.2 1.4 68 310-390 29-98 (103)
190 3sfj_A TAX1-binding protein 3; 98.8 5.7E-09 2E-13 82.8 6.8 59 309-379 44-104 (104)
191 1uez_A KIAA1526 protein; PDZ d 98.8 1.3E-09 4.3E-14 86.3 2.8 60 310-381 35-94 (101)
192 2vwr_A Ligand of NUMB protein 98.8 2.9E-09 9.9E-14 83.1 4.8 59 310-381 29-90 (95)
193 2i1n_A Discs, large homolog 3; 98.8 3.1E-09 1E-13 84.1 4.9 61 310-383 34-97 (102)
194 2opg_A Multiple PDZ domain pro 98.8 7.1E-09 2.4E-13 81.3 7.0 62 310-384 30-94 (98)
195 1m5z_A GRIP, AMPA receptor int 98.8 5E-09 1.7E-13 81.0 5.9 57 310-379 32-90 (91)
196 2eeg_A PDZ and LIM domain prot 98.8 3.5E-09 1.2E-13 82.5 4.9 59 310-381 32-92 (94)
197 2q9v_A Membrane-associated gua 98.8 3.7E-09 1.3E-13 81.6 4.9 60 310-380 27-89 (90)
198 2fne_A Multiple PDZ domain pro 98.8 6.9E-09 2.4E-13 84.4 6.7 60 310-382 53-115 (117)
199 2yt7_A Amyloid beta A4 precurs 98.8 7.8E-09 2.7E-13 81.7 6.6 59 310-379 37-98 (101)
200 2iwq_A Multiple PDZ domain pro 98.8 8.5E-09 2.9E-13 84.6 6.9 59 310-381 59-120 (123)
201 2fe5_A Presynaptic protein SAP 98.8 1.1E-08 3.8E-13 79.5 7.3 59 310-381 33-94 (94)
202 3ngh_A PDZ domain-containing p 98.8 2.3E-09 7.8E-14 85.5 3.3 60 310-382 26-87 (106)
203 1wfg_A Regulating synaptic mem 98.8 7.4E-09 2.5E-13 86.0 6.5 61 310-381 65-128 (131)
204 2djt_A Unnamed protein product 98.8 6.8E-09 2.3E-13 82.4 6.0 60 310-382 38-100 (104)
205 2fcf_A Multiple PDZ domain pro 98.8 7.5E-09 2.6E-13 81.9 6.2 59 310-381 39-100 (103)
206 2edz_A PDZ domain-containing p 98.8 3.3E-09 1.1E-13 85.8 4.1 65 310-387 38-104 (114)
207 1yph_C Chymotrypsin A, chain B 98.8 1E-07 3.5E-12 78.9 13.2 85 113-199 24-128 (131)
208 3r68_A Na(+)/H(+) exchange reg 98.8 8.5E-09 2.9E-13 80.3 6.1 60 310-382 29-90 (95)
209 1um1_A KIAA1849 protein, RSGI 98.8 7.2E-10 2.5E-14 89.1 -0.1 68 309-389 35-105 (110)
210 2kpk_A Membrane-associated gua 98.8 1E-08 3.6E-13 84.8 6.9 61 310-381 43-106 (129)
211 2ejy_A 55 kDa erythrocyte memb 98.8 7.6E-09 2.6E-13 81.2 5.7 58 310-380 36-96 (97)
212 1kwa_A Hcask/LIN-2 protein; PD 98.8 1E-08 3.5E-13 78.9 6.3 59 310-381 25-86 (88)
213 2d90_A PDZ domain containing p 98.8 7.5E-09 2.6E-13 81.9 5.5 60 310-382 30-91 (102)
214 2byg_A Channel associated prot 98.8 1.3E-08 4.3E-13 82.8 7.0 59 310-381 54-115 (117)
215 3gsl_A Disks large homolog 4; 98.8 1.6E-08 5.3E-13 89.4 8.1 72 310-392 35-109 (196)
216 1wha_A KIAA0147 protein, scrib 98.8 1.2E-08 3.9E-13 81.3 6.5 59 310-381 38-99 (105)
217 1wi2_A Riken cDNA 2700099C19; 98.8 9.8E-09 3.3E-13 81.6 6.0 58 310-381 41-100 (104)
218 1va8_A Maguk P55 subfamily mem 98.7 9.9E-09 3.4E-13 82.9 6.0 60 310-382 48-110 (113)
219 3cbz_A Dishevelled-2; PDZ doma 98.7 1E-08 3.4E-13 82.2 5.9 62 310-383 33-99 (108)
220 2vsv_A Rhophilin-2; scaffold p 98.7 1.8E-08 6.1E-13 80.8 7.3 60 310-381 44-105 (109)
221 2jik_A Synaptojanin-2 binding 98.7 1.4E-08 4.7E-13 80.2 6.5 59 310-381 37-98 (101)
222 2r4h_A Membrane-associated gua 98.7 1.7E-08 5.7E-13 81.4 7.1 60 310-382 49-111 (112)
223 2ego_A General receptor for ph 98.7 1.7E-08 5.8E-13 78.9 7.0 57 310-379 37-95 (96)
224 1g9o_A NHE-RF; PDZ domain, com 98.7 1.3E-08 4.6E-13 78.6 6.2 60 310-381 27-88 (91)
225 3rle_A Golgi reassembly-stacki 98.7 2.7E-09 9.1E-14 95.9 2.3 87 292-390 94-180 (209)
226 2iwn_A Multiple PDZ domain pro 98.7 1.7E-08 5.7E-13 78.8 6.5 59 310-381 33-94 (97)
227 2kv8_A RGS12, regulator of G-p 98.7 7.2E-09 2.5E-13 78.7 4.3 58 310-380 23-82 (83)
228 2dmz_A INAD-like protein; PDZ 98.7 7.4E-09 2.5E-13 85.6 4.6 62 310-384 46-110 (129)
229 3axa_A Afadin, nectin-3, prote 98.7 2E-08 6.7E-13 80.0 6.8 60 310-382 38-100 (106)
230 1uew_A Membrane associated gua 98.7 1.5E-08 5.2E-13 81.8 6.2 59 311-382 44-105 (114)
231 2qg1_A Multiple PDZ domain pro 98.7 2.1E-08 7E-13 77.7 6.5 59 310-381 29-90 (92)
232 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.4E-08 4.8E-13 81.2 5.7 60 310-382 42-104 (108)
233 1v62_A KIAA1719 protein; struc 98.7 9.5E-09 3.2E-13 83.5 4.7 59 311-382 43-104 (117)
234 2e7k_A Maguk P55 subfamily mem 98.7 1.4E-08 4.7E-13 78.7 5.4 69 293-380 18-88 (91)
235 2kjd_A Sodium/hydrogen exchang 98.7 8.1E-09 2.8E-13 85.2 4.2 63 310-384 33-97 (128)
236 3qe1_A Sorting nexin-27, G pro 98.7 1.5E-08 5E-13 80.9 5.5 60 310-382 43-104 (107)
237 2qkv_A Inactivation-NO-after-p 98.7 1.4E-08 4.7E-13 79.5 5.3 58 310-380 31-91 (96)
238 1p1d_A PDZ45, glutamate recept 98.7 2.1E-08 7E-13 89.0 7.0 61 310-381 36-99 (196)
239 2iwo_A Multiple PDZ domain pro 98.7 6.9E-09 2.4E-13 84.8 3.6 62 310-384 53-117 (120)
240 1ujd_A KIAA0559 protein; PDZ d 98.7 1.9E-08 6.3E-13 81.8 6.0 60 310-382 49-111 (117)
241 3i4w_A Disks large homolog 4; 98.7 1.3E-08 4.4E-13 80.7 4.8 59 310-381 35-96 (104)
242 1y7n_A Amyloid beta A4 precurs 98.7 2.9E-08 9.9E-13 76.7 6.7 54 313-379 34-89 (90)
243 2qbw_A PDZ-fibronectin fusion 98.7 3.6E-08 1.2E-12 87.2 8.2 69 310-392 24-97 (195)
244 1q3o_A Shank1; PDZ, GKAP, pept 98.7 3E-08 1E-12 79.4 7.0 58 310-380 45-104 (109)
245 1ujv_A Membrane associated gua 98.7 3.3E-08 1.1E-12 77.4 6.9 59 310-381 32-92 (96)
246 2dlu_A INAD-like protein; PDZ 98.7 2.2E-08 7.6E-13 80.4 6.1 60 310-382 38-100 (111)
247 1lvm_A Catalytic domain of the 98.7 1.1E-06 3.8E-11 78.3 17.3 176 87-285 19-202 (229)
248 2la8_A Inactivation-NO-after-p 98.7 1.4E-08 4.8E-13 81.1 4.6 58 310-380 25-85 (106)
249 1tp5_A Presynaptic density pro 98.7 1.6E-08 5.4E-13 82.4 4.8 61 310-381 38-99 (119)
250 1wi4_A Synip, syntaxin binding 98.7 2E-08 6.7E-13 80.6 5.2 61 310-381 41-106 (109)
251 1nf3_C PAR-6B; semi-CRIB motif 98.7 2E-08 6.9E-13 82.9 5.4 59 310-381 65-126 (128)
252 1whd_A RGS3, regulator of G-pr 98.7 2E-08 6.9E-13 79.1 5.1 59 310-381 36-96 (100)
253 1x6d_A Interleukin-16; PDZ dom 98.7 7.7E-09 2.6E-13 84.3 2.7 63 310-384 42-107 (119)
254 2g5m_B Neurabin-2; spinophilin 98.7 5.2E-09 1.8E-13 84.4 1.6 66 310-388 35-103 (113)
255 1wg6_A Hypothetical protein (r 98.7 1.3E-08 4.5E-13 84.0 4.0 61 310-381 55-123 (127)
256 2pka_B Kallikrein A; serine pr 98.7 3.6E-07 1.2E-11 77.5 13.1 125 159-286 6-149 (152)
257 1mfg_A ERB-B2 interacting prot 98.6 2.8E-08 9.7E-13 77.4 5.6 57 310-380 35-93 (95)
258 3b76_A E3 ubiquitin-protein li 98.6 3.7E-08 1.3E-12 80.1 6.5 58 310-380 53-113 (118)
259 3o46_A Maguk P55 subfamily mem 98.6 4.4E-08 1.5E-12 76.0 6.4 60 310-382 28-90 (93)
260 2yuy_A RHO GTPase activating p 98.6 6.7E-09 2.3E-13 85.6 1.8 59 310-381 61-121 (126)
261 2dkr_A LIN-7 homolog B; LIN-7B 98.6 3.6E-08 1.2E-12 76.4 5.9 59 310-381 30-91 (93)
262 4a8c_A Periplasmic PH-dependen 98.6 8.2E-08 2.8E-12 95.7 10.0 71 310-393 363-433 (436)
263 1wfv_A Membrane associated gua 98.6 1.1E-08 3.7E-13 81.0 2.9 60 310-382 36-98 (103)
264 2dm8_A INAD-like protein; PDZ 98.6 2.5E-08 8.5E-13 80.7 5.1 61 310-383 43-106 (116)
265 3qik_A Phosphatidylinositol 3, 98.6 2E-08 6.9E-13 78.6 4.2 57 310-377 39-98 (101)
266 2db5_A INAD-like protein; PDZ 98.6 2.9E-08 9.8E-13 81.9 5.4 59 310-381 54-116 (128)
267 2eno_A Synaptojanin-2-binding 98.6 3.3E-08 1.1E-12 80.6 5.4 61 309-382 46-109 (120)
268 2edp_A Fragment, shroom family 98.6 2.1E-08 7.2E-13 79.0 4.0 60 310-382 35-96 (100)
269 1vae_A Rhophilin 2, rhophilin, 98.6 2.7E-08 9.1E-13 80.1 4.5 58 310-379 36-95 (111)
270 1qav_A Alpha-1 syntrophin (res 98.6 4.4E-08 1.5E-12 75.5 5.5 57 310-379 30-89 (90)
271 3gsl_A Disks large homolog 4; 98.6 4.8E-08 1.6E-12 86.2 6.5 62 310-384 130-194 (196)
272 1wf8_A Neurabin-I; PDZ domain, 98.6 2.1E-08 7.2E-13 80.0 3.8 59 310-381 40-101 (107)
273 3pv2_A DEGQ; trypsin fold, PDZ 98.6 6E-08 2.1E-12 97.1 7.7 65 310-387 386-450 (451)
274 1x5n_A Harmonin; PDZ domain, u 98.6 6.3E-09 2.1E-13 84.1 0.3 66 310-389 41-109 (114)
275 3k1r_A Harmonin; protein-prote 98.6 8.4E-08 2.9E-12 84.9 7.5 58 310-381 110-169 (192)
276 3kzd_A TIAM-1, T-lymphoma inva 98.6 1.2E-07 4.2E-12 73.6 7.2 53 310-377 35-89 (94)
277 3l4f_D SH3 and multiple ankyri 98.6 1.1E-07 3.8E-12 78.9 7.4 60 310-382 65-126 (132)
278 1uju_A Scribble; PDZ domain, c 98.6 2.1E-08 7.1E-13 80.6 2.8 59 310-381 44-105 (111)
279 1uhp_A Hypothetical protein KI 98.6 1.1E-07 3.8E-12 75.8 7.0 59 310-381 41-102 (107)
280 2qt5_A Glutamate receptor-inte 98.6 1.5E-07 5E-12 83.7 8.5 59 310-381 33-94 (200)
281 2daz_A INAD-like protein; PDZ 98.6 3.3E-08 1.1E-12 81.1 3.9 60 310-382 51-113 (124)
282 2d92_A INAD-like protein; PDZ 98.6 6.9E-08 2.3E-12 77.2 5.7 58 310-379 44-104 (108)
283 2qt5_A Glutamate receptor-inte 98.6 6.8E-08 2.3E-12 85.8 6.2 61 310-383 135-198 (200)
284 3r0h_A INAD, inactivation-NO-a 98.6 1.6E-07 5.5E-12 83.7 8.5 69 310-390 45-120 (206)
285 2edv_A FERM and PDZ domain-con 98.5 4.6E-08 1.6E-12 76.5 4.2 57 310-380 31-89 (96)
286 3e17_A Tight junction protein 98.5 9.1E-08 3.1E-12 73.5 5.8 58 310-380 21-81 (88)
287 1fc6_A Photosystem II D1 prote 98.5 2.5E-07 8.6E-12 90.8 10.1 68 310-389 99-171 (388)
288 2gzv_A PRKCA-binding protein; 98.5 1.4E-07 4.8E-12 76.2 6.9 57 310-379 50-109 (114)
289 1v6b_A Harmonin isoform A1; st 98.5 2.1E-08 7.3E-13 81.6 1.8 58 311-379 44-106 (118)
290 3nfk_A Tyrosine-protein phosph 98.5 1.2E-07 4.2E-12 75.4 5.9 59 310-379 43-107 (107)
291 2ehr_A INAD-like protein; PDZ 98.5 1.1E-07 3.9E-12 77.0 5.7 59 310-381 50-111 (117)
292 4e34_A Golgi-associated PDZ an 98.5 2.1E-07 7.3E-12 71.0 7.0 56 310-378 28-86 (87)
293 1n7t_A 99-MER peptide of densi 98.5 5.6E-08 1.9E-12 76.9 3.6 57 310-380 43-101 (103)
294 2d8i_A T-cell lymphoma invasio 98.5 9.8E-08 3.3E-12 77.1 5.1 56 310-380 44-101 (114)
295 2eei_A PDZ domain-containing p 98.5 7.2E-08 2.5E-12 76.6 4.2 60 310-382 32-93 (106)
296 1i16_A Interleukin 16, LCF; cy 98.5 1.4E-07 4.8E-12 78.0 5.8 60 310-381 57-119 (130)
297 3soe_A Membrane-associated gua 98.5 3.3E-07 1.1E-11 73.6 7.6 63 311-386 35-99 (113)
298 3hpk_A Protein interacting wit 98.5 2.5E-07 8.7E-12 75.8 7.3 56 310-378 45-103 (125)
299 1p1d_A PDZ45, glutamate recept 98.5 1.5E-07 5.3E-12 83.3 5.9 58 310-380 135-195 (196)
300 3tsz_A Tight junction protein 98.5 1.6E-07 5.6E-12 92.1 6.5 61 310-381 31-93 (391)
301 3egg_C Spinophilin; PP1, serin 98.5 2.5E-07 8.4E-12 80.2 6.8 57 310-379 111-170 (170)
302 2z17_A Pleckstrin homology SEC 98.4 1.4E-07 4.9E-12 74.7 4.5 54 310-376 48-103 (104)
303 2cs5_A Tyrosine-protein phosph 98.4 5.8E-08 2E-12 79.0 2.2 64 310-384 41-110 (119)
304 2dc2_A GOPC, golgi associated 98.4 3.9E-07 1.3E-11 72.1 6.9 60 310-382 35-97 (103)
305 2csj_A TJP2 protein; PDZ domai 98.4 1.2E-07 4.1E-12 76.9 3.7 59 310-382 46-106 (117)
306 1r6j_A Syntenin 1; PDZ, membra 98.4 4.8E-07 1.6E-11 68.4 6.6 53 313-378 26-80 (82)
307 1um7_A Synapse-associated prot 98.4 7.6E-08 2.6E-12 77.4 1.9 59 310-381 39-100 (113)
308 3shw_A Tight junction protein 98.4 3E-07 1E-11 91.8 6.4 61 310-381 23-85 (468)
309 1ufx_A KIAA1526 protein; PDZ d 98.3 2.7E-07 9.2E-12 73.1 4.0 60 311-381 33-98 (103)
310 3k50_A Putative S41 protease; 98.3 3.8E-07 1.3E-11 89.7 4.5 58 311-382 91-148 (403)
311 2krg_A Na(+)/H(+) exchange reg 98.3 1.2E-07 4.2E-12 85.3 0.6 61 310-383 33-96 (216)
312 3r0h_A INAD, inactivation-NO-a 98.3 1.2E-06 3.9E-11 78.1 6.5 58 310-380 136-196 (206)
313 3suz_A Amyloid beta A4 precurs 98.2 4.1E-07 1.4E-11 89.2 2.8 67 310-387 232-301 (388)
314 1ky9_A Protease DO, DEGP, HTRA 98.2 2.1E-07 7.1E-12 93.1 0.0 65 310-387 383-447 (448)
315 2lob_A Golgi-associated PDZ an 97.5 2.3E-07 7.9E-12 74.7 0.0 55 310-377 53-110 (112)
316 1z87_A Alpha-1-syntrophin; pro 98.0 2.3E-06 7.9E-11 79.1 4.1 59 310-381 103-164 (263)
317 3gge_A PDZ domain-containing p 98.0 1.9E-05 6.5E-10 61.1 8.0 59 310-379 28-89 (95)
318 3qzr_A 3C protein; chymotrypsi 97.9 0.0013 4.5E-08 56.9 18.5 162 87-275 12-179 (187)
319 2xkx_A Disks large homolog 4; 97.9 1.5E-05 5E-10 84.4 6.9 68 310-390 89-161 (721)
320 2hal_A Hepatitis A protease 3C 97.8 0.00068 2.3E-08 60.5 16.3 177 84-275 3-205 (212)
321 1w9e_A Syntenin 1; cell adhesi 97.8 1.5E-06 5.2E-11 74.7 -1.3 33 313-356 110-142 (166)
322 3zve_A 3C protease; hydrolase, 97.8 0.00099 3.4E-08 58.1 15.4 145 115-274 24-174 (190)
323 2xkx_A Disks large homolog 4; 97.7 2.3E-05 7.8E-10 82.9 5.9 63 309-384 183-248 (721)
324 3q3y_A HEVB EV93 3C protease; 97.7 0.0023 7.8E-08 55.4 17.3 160 88-274 11-176 (191)
325 2b0f_A Picornain 3C (protease 97.7 0.00073 2.5E-08 58.5 13.6 143 116-274 25-173 (182)
326 2bhg_A Foot-and-mouth disease 97.7 0.00029 1E-08 62.7 11.2 159 115-285 31-204 (209)
327 1cqq_A Type 2 rhinovirus 3C pr 97.7 0.004 1.4E-07 53.9 17.6 144 115-274 24-174 (180)
328 4dcd_A Protease 3C, genome pol 97.6 0.0018 6.1E-08 56.2 15.2 145 114-274 30-181 (190)
329 1k32_A Tricorn protease; prote 97.6 8.4E-05 2.9E-09 81.7 8.3 68 310-388 748-824 (1045)
330 4fln_A Protease DO-like 2, chl 97.2 0.00067 2.3E-08 68.8 8.7 55 310-376 415-469 (539)
331 3suz_A Amyloid beta A4 precurs 97.0 0.0001 3.6E-09 72.1 0.0 57 311-380 316-374 (388)
332 2pka_A Kallikrein A; serine pr 97.0 0.0016 5.3E-08 48.3 6.5 23 114-137 24-46 (80)
333 2ijd_1 Picornain 3C, RNA-direc 96.7 0.091 3.1E-06 54.5 19.2 144 115-274 24-174 (644)
334 1yph_E Chymotrypsin A, chain C 95.9 0.007 2.4E-07 46.6 4.4 52 234-286 41-95 (97)
335 1wxr_A Haemoglobin protease; h 94.8 0.077 2.6E-06 57.1 9.0 79 114-198 56-144 (1048)
336 4ash_A NS6 protease; hydrolase 93.0 0.3 1E-05 40.0 7.2 138 114-261 15-165 (185)
337 2fp7_B Serine protease NS3; fl 92.0 0.31 1E-05 40.7 6.2 133 90-258 3-138 (172)
338 2ggv_B NS3, non-structural pro 91.9 0.31 1.1E-05 41.0 6.2 134 89-258 16-152 (185)
339 3e90_B NS3 protease; trypsin-l 91.7 0.42 1.4E-05 40.7 6.8 135 88-258 20-157 (198)
340 2fom_B Polyprotein; flavivirus 91.7 0.34 1.2E-05 41.0 6.2 133 88-256 16-151 (185)
341 3u1j_B Serine protease NS3; se 91.1 0.53 1.8E-05 39.9 6.8 136 88-259 25-163 (191)
342 3lkw_A Fusion protein of nonst 90.8 0.57 1.9E-05 41.0 6.9 130 93-258 71-203 (236)
343 2fyq_A Chymotrypsin-like cyste 90.4 1.1 3.7E-05 37.0 7.8 138 114-261 26-176 (194)
344 1vcp_A Semliki forest virus ca 90.4 0.23 7.8E-06 39.1 3.6 29 232-260 93-121 (149)
345 4agk_A Capsid protein, coat pr 90.1 0.41 1.4E-05 38.1 4.9 30 232-261 101-130 (158)
346 1svp_A Sindbis virus capsid pr 89.9 0.26 8.8E-06 39.4 3.6 28 233-260 103-130 (161)
347 1ep5_B Capsid protein C, coat 89.4 0.45 1.5E-05 37.9 4.7 29 232-260 100-128 (157)
348 2yew_A Capsid protein, coat pr 89.2 0.39 1.3E-05 41.8 4.5 28 233-260 198-225 (253)
349 1kxf_A Sindbis virus capsid pr 87.9 0.47 1.6E-05 41.7 4.2 28 233-260 208-235 (264)
350 3su6_A NS3 protease, NS4A prot 81.5 0.97 3.3E-05 38.2 3.1 43 234-277 154-196 (203)
351 4hcz_A PHD finger protein 1; p 63.1 32 0.0011 23.3 6.6 38 134-171 4-41 (58)
352 3s6n_G Small nuclear ribonucle 59.3 41 0.0014 23.9 7.3 33 138-170 15-47 (76)
353 1i4k_A Putative snRNP SM-like 59.2 19 0.00065 25.7 5.4 59 138-198 15-73 (77)
354 3dor_A Protein CT_858, CPAF; m 57.9 17 0.00057 36.8 6.4 49 342-390 113-185 (583)
355 1th7_A SnRNP-2, small nuclear 57.8 26 0.00088 25.3 6.0 58 138-197 20-77 (81)
356 2eqj_A Metal-response element- 52.4 53 0.0018 22.9 6.4 38 134-171 14-51 (66)
357 2o8m_A Protease; NS3, NS4A, vi 52.2 13 0.00043 31.9 3.8 43 236-279 146-188 (200)
358 1h64_1 SnRNP SM-like protein; 52.2 27 0.00094 24.7 5.3 33 138-170 15-47 (75)
359 1d3b_B Protein (small nuclear 50.1 26 0.0009 25.8 5.1 33 138-170 15-47 (91)
360 4a4f_A SurviVal of motor neuro 49.3 60 0.0021 22.2 6.7 35 136-170 11-46 (64)
361 1mgq_A SM-like protein; LSM, R 48.6 33 0.0011 24.9 5.3 33 138-170 26-58 (83)
362 1z8r_A Coxsackievirus B4 polyp 46.9 24 0.00081 29.3 4.6 31 227-258 113-143 (166)
363 1y96_A Gemin6, SIP2, GEM-assoc 46.8 51 0.0017 24.3 6.0 33 138-170 18-51 (86)
364 1d3b_A Protein (small nuclear 46.3 40 0.0014 23.9 5.4 33 138-170 16-48 (75)
365 3s6n_F Small nuclear ribonucle 45.9 39 0.0013 24.7 5.4 60 137-198 16-75 (86)
366 4emk_B U6 snRNA-associated SM- 45.8 31 0.0011 24.4 4.7 33 138-170 15-47 (75)
367 4emg_A Probable U6 snRNA-assoc 44.9 39 0.0013 25.2 5.3 34 137-170 19-52 (93)
368 1i8f_A Putative snRNP SM-like 44.3 32 0.0011 24.8 4.7 33 138-170 22-54 (81)
369 1ljo_A Archaeal SM-like protei 44.1 46 0.0016 23.6 5.4 33 138-170 16-49 (77)
370 4emk_A U6 snRNA-associated SM- 43.9 41 0.0014 25.2 5.3 33 138-170 31-63 (94)
371 1n9r_A SMF, small nuclear ribo 43.6 54 0.0019 24.4 5.9 59 137-197 31-90 (93)
372 4emk_C U6 snRNA-associated SM- 43.1 42 0.0014 26.1 5.4 34 137-170 33-66 (113)
373 3bw1_A SMX4 protein, U6 snRNA- 42.2 36 0.0012 25.5 4.7 33 138-170 21-53 (96)
374 1b34_A Protein (small nuclear 42.2 69 0.0024 25.0 6.6 61 138-200 13-73 (119)
375 1b34_B Protein (small nuclear 41.8 43 0.0015 26.1 5.3 34 137-170 39-72 (118)
376 2hrv_A 2A cysteine proteinase; 41.1 25 0.00084 28.5 3.7 30 228-258 94-123 (142)
377 4esy_A CBS domain containing m 39.7 15 0.00052 30.1 2.5 22 237-258 47-68 (170)
378 4emh_A Probable U6 snRNA-assoc 38.1 58 0.002 24.9 5.4 61 137-199 26-87 (105)
379 3pgw_B SM B; protein-RNA compl 36.7 39 0.0013 29.8 4.7 33 138-170 15-47 (231)
380 1mhn_A SurviVal motor neuron p 34.1 1E+02 0.0035 20.5 6.1 34 137-170 7-41 (59)
381 2jvf_A De novo protein M7; tet 33.6 52 0.0018 23.2 3.9 20 371-390 7-26 (96)
382 3k6e_A CBS domain protein; str 33.3 21 0.00071 29.0 2.3 17 242-258 118-134 (156)
383 3d3r_A Hydrogenase assembly ch 32.4 72 0.0025 24.3 5.0 45 150-197 26-72 (103)
384 3by8_A Sensor protein DCUS; hi 32.3 25 0.00085 28.1 2.6 18 242-259 111-128 (142)
385 3nqr_A Magnesium and cobalt ef 32.1 23 0.00077 27.2 2.3 21 238-258 98-118 (127)
386 3k6e_A CBS domain protein; str 32.1 25 0.00085 28.5 2.6 23 236-258 45-67 (156)
387 2m0o_A PHD finger protein 1; t 31.4 62 0.0021 23.2 4.1 36 136-171 29-64 (79)
388 3lfr_A Putative metal ION tran 31.1 24 0.00082 27.6 2.3 20 239-258 100-119 (136)
389 3gby_A Uncharacterized protein 30.4 26 0.00087 26.9 2.3 19 240-258 100-118 (128)
390 3hf7_A Uncharacterized CBS-dom 30.3 25 0.00086 27.2 2.3 19 240-258 101-119 (130)
391 3i8n_A Uncharacterized protein 30.0 26 0.00088 27.0 2.3 21 238-258 101-121 (130)
392 2fwk_A U6 snRNA-associated SM- 29.5 48 0.0016 26.0 3.7 32 138-169 39-70 (121)
393 3jtf_A Magnesium and cobalt ef 29.3 26 0.00088 27.0 2.2 21 238-258 98-118 (129)
394 2y9a_D Small nuclear ribonucle 29.1 90 0.0031 24.7 5.3 60 138-199 16-75 (126)
395 2d9t_A Tudor domain-containing 29.1 1.5E+02 0.0053 20.9 6.4 34 137-170 13-47 (78)
396 2xk0_A Polycomb protein PCL; t 28.8 1.5E+02 0.0051 20.7 5.6 38 132-171 14-51 (69)
397 1m5q_A SMAP3, small nuclear ri 28.6 95 0.0032 24.7 5.4 56 138-199 11-66 (130)
398 2e5p_A Protein PHF1, PHD finge 28.3 1.5E+02 0.0052 20.6 6.1 37 135-171 11-47 (68)
399 1g5v_A SurviVal motor neuron p 28.3 1.5E+02 0.0052 21.7 6.1 37 134-170 11-48 (88)
400 2equ_A PHD finger protein 20-l 28.1 1.6E+02 0.0054 20.8 6.0 35 135-170 11-45 (74)
401 1p0z_A Sensor kinase CITA; tra 26.7 39 0.0013 26.4 2.8 19 242-260 106-124 (131)
402 3oi8_A Uncharacterized protein 26.6 31 0.0011 27.6 2.3 18 240-257 134-151 (156)
403 3kpb_A Uncharacterized protein 26.6 33 0.0011 25.8 2.3 21 238-258 92-112 (122)
404 3lv9_A Putative transporter; C 26.5 32 0.0011 27.1 2.3 20 239-258 118-137 (148)
405 3pnw_C Tudor domain-containing 26.1 1.8E+02 0.006 20.6 6.2 39 132-170 16-55 (77)
406 3oco_A Hemolysin-like protein 25.8 30 0.001 27.6 2.0 20 239-258 116-135 (153)
407 2z1c_A Hydrogenase expression/ 25.3 1.2E+02 0.0042 21.5 4.9 41 150-195 5-45 (75)
408 3lqn_A CBS domain protein; csg 25.0 35 0.0012 26.8 2.3 17 242-258 119-135 (150)
409 3kxr_A Magnesium transporter, 24.7 35 0.0012 29.2 2.3 21 238-258 146-166 (205)
410 2nyc_A Nuclear protein SNF4; b 24.2 38 0.0013 26.2 2.3 20 239-258 114-133 (144)
411 2ef7_A Hypothetical protein ST 23.6 39 0.0013 25.8 2.3 20 239-258 98-117 (133)
412 3ctu_A CBS domain protein; str 23.4 40 0.0014 26.8 2.3 14 243-256 119-132 (156)
413 4gqw_A CBS domain-containing p 23.3 40 0.0014 26.3 2.3 21 238-258 115-135 (152)
414 2rih_A Conserved protein with 22.7 42 0.0014 26.1 2.3 19 240-258 102-120 (141)
415 3lhh_A CBS domain protein; str 22.7 41 0.0014 27.5 2.3 21 238-258 136-156 (172)
416 2uv4_A 5'-AMP-activated protei 22.0 44 0.0015 26.4 2.3 14 243-256 128-141 (152)
417 3sl7_A CBS domain-containing p 22.0 43 0.0015 27.1 2.3 21 238-258 128-148 (180)
418 2e5q_A PHD finger protein 19; 21.7 2E+02 0.0068 19.7 5.0 36 136-171 10-45 (63)
419 3ocm_A Putative membrane prote 21.4 40 0.0014 27.8 2.0 20 239-258 130-149 (173)
420 2p9m_A Hypothetical protein MJ 20.9 49 0.0017 25.4 2.3 19 240-258 110-128 (138)
421 3s6n_E Small nuclear ribonucle 20.8 1.3E+02 0.0045 22.2 4.5 26 145-170 38-63 (92)
422 3ghd_A A cystathionine beta-sy 20.7 50 0.0017 22.8 2.0 20 238-258 22-41 (70)
423 2ot2_A Hydrogenase isoenzymes 20.5 2.2E+02 0.0075 21.0 5.6 41 150-195 5-51 (90)
424 2emq_A Hypothetical conserved 20.4 49 0.0017 26.1 2.3 14 243-256 116-129 (157)
425 1o50_A CBS domain-containing p 20.1 50 0.0017 26.2 2.3 19 240-258 127-145 (157)
No 1
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-56 Score=438.21 Aligned_cols=322 Identities=59% Similarity=0.906 Sum_probs=280.3
Q ss_pred ccCCcccchHHHHHHHcCCceEEEEeeeccccccc---cCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEE
Q 015960 74 CKLKTDEVETAGIFEENLPSVVHITNFGMNTFTLT---MEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTL 150 (397)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~---~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~ 150 (397)
..+.+++.+..++++++.||||.|.+...+...+. .....+.||||+|+++||||||+||+.++..+.|.+.+++.+
T Consensus 10 ~~~~~~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~ 89 (348)
T 3qo6_A 10 KKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTF 89 (348)
T ss_dssp CCCCHHHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEE
T ss_pred cccCcchhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEECCCCEE
Confidence 34566778899999999999999987654222111 112356899999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCC-CCCCcccEE
Q 015960 151 DAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITA-TGPPIQGLI 229 (397)
Q Consensus 151 ~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~-~~~~~~~~i 229 (397)
++++++.|+.+||||||++.+...+++++++++..+..|+.|+++|||.+...+++.|+++.+.+..... .+.....++
T Consensus 90 ~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i 169 (348)
T 3qo6_A 90 DAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI 169 (348)
T ss_dssp EEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEEEEE
T ss_pred EEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCcccCEE
Confidence 9999999999999999999865578999998888899999999999999988899999999887754332 233345789
Q ss_pred EEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhccccccccCCCchhHH-HHHHcC
Q 015960 230 QIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHDQL-LEKLMG 308 (397)
Q Consensus 230 ~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~lGi~~~~~-~~~~~~ 308 (397)
++|+.+|+|||||||+|.+|+||||+++.+...+...+++|+||++.+++++++|+++|++.|||||+...+. ..+.++
T Consensus 170 ~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~~~~~~ 249 (348)
T 3qo6_A 170 QTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLG 249 (348)
T ss_dssp EECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTTTTTTT
T ss_pred EEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchhhhhcC
Confidence 9999999999999999999999999999987766678899999999999999999999999999999965422 123356
Q ss_pred CCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEE
Q 015960 309 ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILII 388 (397)
Q Consensus 309 ~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 388 (397)
..|++|.+|.++|||+++||++..++..+.|+.||+|++|||++|.++.|+..+|...++|++++|+|+|+|++++++++
T Consensus 250 ~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 329 (348)
T 3qo6_A 250 VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVT 329 (348)
T ss_dssp CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEEEEE
T ss_pred CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEEEEE
Confidence 68999999999999999999998889999999999999999999999999999998888999999999999999999999
Q ss_pred eeeCCCC
Q 015960 389 LEVEPDE 395 (397)
Q Consensus 389 l~~~~~~ 395 (397)
+.+++++
T Consensus 330 l~~~~~~ 336 (348)
T 3qo6_A 330 LEPKPDE 336 (348)
T ss_dssp CEECC--
T ss_pred EccCCCC
Confidence 9988754
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=4.4e-55 Score=425.77 Aligned_cols=301 Identities=33% Similarity=0.561 Sum_probs=262.1
Q ss_pred chHHHHHHHcCCceEEEEeeeccc--------ccccc---------CCCCceeEEEEEcCC-CEEEEcccccCCCCeEEE
Q 015960 81 VETAGIFEENLPSVVHITNFGMNT--------FTLTM---------EYPQATGTGFIWDED-GHIVTNHHVIEGASSVKV 142 (397)
Q Consensus 81 ~~~~~~~~~~~~sVV~I~~~~~~~--------~~~~~---------~~~~~~GSG~ii~~~-G~ILT~aHvv~~~~~i~V 142 (397)
.++.++++++.||||+|....... |...+ ....+.||||+|+++ ||||||+||+.++..+.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V 92 (345)
T 3stj_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (345)
T ss_dssp CBSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEE
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEE
Confidence 358899999999999998765321 11000 112478999999987 999999999999999999
Q ss_pred EecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCC
Q 015960 143 TLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATG 222 (397)
Q Consensus 143 ~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~ 222 (397)
.+.|++.+++++++.|+.+||||||++.+ ..+++++++++..++.|++|+++|||++...+++.|+|+...+.....
T Consensus 93 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~~~~~-- 169 (345)
T 3stj_A 93 QLNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNL-- 169 (345)
T ss_dssp ECTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEECCSSS--
T ss_pred EeCCCcEEEEEEEEEcCCCCEEEEEEccc-CCCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeecccccCC--
Confidence 99999999999999999999999999765 478999998888899999999999999999999999999987752221
Q ss_pred CCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhccccccccCCCc---h
Q 015960 223 PPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIA---H 299 (397)
Q Consensus 223 ~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~lGi~---~ 299 (397)
.....++++|+.+++|+|||||+|.+|+||||+++.....+...+++||||++.+++++++|+++|++.|+|||+. .
T Consensus 170 ~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~lGv~~~~~ 249 (345)
T 3stj_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM 249 (345)
T ss_dssp SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEEC
T ss_pred CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccccceeeEee
Confidence 2235789999999999999999999999999999988776667889999999999999999999999999999994 3
Q ss_pred hHHHHHHcCC---CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEE
Q 015960 300 DQLLEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRI 376 (397)
Q Consensus 300 ~~~~~~~~~~---~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v 376 (397)
++..++.+++ .|++|.+|.++|||+++||++ ||+|++|||++|.++.|+..++...++|++++|+|
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 318 (345)
T 3stj_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGL 318 (345)
T ss_dssp CHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCT-----------TCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEE
T ss_pred cHHHHHhcCCCCCceEEEEEeccCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 4556666666 699999999999999999999 99999999999999999999998888999999999
Q ss_pred EECCeEEEEEEEeeeCCCC
Q 015960 377 LRGTQLEEILIILEVEPDE 395 (397)
Q Consensus 377 ~R~g~~~~~~v~l~~~~~~ 395 (397)
+|+|+++++++++.+++..
T Consensus 319 ~R~g~~~~~~v~l~~~~~~ 337 (345)
T 3stj_A 319 LRNGKPLEVEVTLDTSTSS 337 (345)
T ss_dssp EETTEEEEEEEECEEC---
T ss_pred EECCEEEEEEEEEcccCCC
Confidence 9999999999999887654
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=6e-53 Score=423.38 Aligned_cols=302 Identities=32% Similarity=0.548 Sum_probs=264.7
Q ss_pred ccchHHHHHHHcCCceEEEEeeeccc--------cccc---------cCCCCceeEEEEEcCC-CEEEEcccccCCCCeE
Q 015960 79 DEVETAGIFEENLPSVVHITNFGMNT--------FTLT---------MEYPQATGTGFIWDED-GHIVTNHHVIEGASSV 140 (397)
Q Consensus 79 ~~~~~~~~~~~~~~sVV~I~~~~~~~--------~~~~---------~~~~~~~GSG~ii~~~-G~ILT~aHvv~~~~~i 140 (397)
...++.++++++.||||.|.+..... |... .....+.||||+|+++ ||||||+||+.++..+
T Consensus 11 ~~~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i 90 (436)
T 4a8c_A 11 PLPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKI 90 (436)
T ss_pred CCCCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEE
Confidence 34479999999999999998765321 1100 0112578999999987 9999999999999999
Q ss_pred EEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCC
Q 015960 141 KVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITA 220 (397)
Q Consensus 141 ~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~ 220 (397)
.|.+.|++.++|++++.|+.+||||||++.+ ..+++++++++..++.|++|+++|||++...+++.|+|++..+....
T Consensus 91 ~V~~~dg~~~~a~vv~~d~~~DlAllkv~~~-~~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~~- 168 (436)
T 4a8c_A 91 SIQLNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLN- 168 (436)
T ss_pred EEEeCCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeecccccC-
Confidence 9999999999999999999999999999765 37899999988889999999999999999999999999998876222
Q ss_pred CCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhccccccccCCCch-
Q 015960 221 TGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAH- 299 (397)
Q Consensus 221 ~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~lGi~~- 299 (397)
...+..++++|+++++|+|||||+|.+|+||||+++.+...+...+++||||++.+++++++|+++|++.|+|||+..
T Consensus 169 -~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~ 247 (436)
T 4a8c_A 169 -LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGT 247 (436)
T ss_pred -CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccccccCceEec
Confidence 123357899999999999999999999999999999887766677899999999999999999999999999999953
Q ss_pred --hHHHHHHcCC---CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEE
Q 015960 300 --DQLLEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIV 374 (397)
Q Consensus 300 --~~~~~~~~~~---~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l 374 (397)
++..++.+++ .|++|.+|.++|||+++||+. ||+|++|||++|.++.++...+....+|+++++
T Consensus 248 ~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l 316 (436)
T 4a8c_A 248 EMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKL 316 (436)
T ss_pred ccCHHHHHHhCCCCCcceEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEE
Confidence 3455666666 699999999999999999999 999999999999999999999988788999999
Q ss_pred EEEECCeEEEEEEEeeeCCC
Q 015960 375 RILRGTQLEEILIILEVEPD 394 (397)
Q Consensus 375 ~v~R~g~~~~~~v~l~~~~~ 394 (397)
+|+|+|+.+++++++..++.
T Consensus 317 ~v~R~g~~~~~~v~l~~~~~ 336 (436)
T 4a8c_A 317 GLLRNGKPLEVEVTLDTSTS 336 (436)
T ss_pred EEEECCEEEEEEEEECCCCc
Confidence 99999999999999887653
No 4
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=3.9e-52 Score=401.62 Aligned_cols=302 Identities=33% Similarity=0.489 Sum_probs=257.9
Q ss_pred ccchHHHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEc
Q 015960 79 DEVETAGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD 158 (397)
Q Consensus 79 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d 158 (397)
.+.++.++++++.||||+|.....+..+.......+.||||+|+++||||||+||+.++..+.|.+.+++.++++++++|
T Consensus 7 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~d 86 (318)
T 1te0_A 7 TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSD 86 (318)
T ss_dssp CCCCCHHHHHHHGGGEEEEEEEEECSSSSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEEE
T ss_pred ccccHHHHHHhcCCcEEEEEeEeccCCcccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEeC
Confidence 44567889999999999998865432211111234689999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCC
Q 015960 159 QGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRG 238 (397)
Q Consensus 159 ~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G 238 (397)
+.+||||||++.+ ..+++++|+++..+..|++|+++|||++....++.|+|+...+..... .....++++|+.+++|
T Consensus 87 ~~~DlAllk~~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~--~~~~~~i~~d~~~~~G 163 (318)
T 1te0_A 87 SLTDLAVLIIKAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP--TGRQNFLQTDASINHG 163 (318)
T ss_dssp TTTTEEEEECCCS-SCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCCT--TCSCCSEEESSCCCTT
T ss_pred CCceEEEEEEeCC-CCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccCC--CCcCCEEEECCCCCCC
Confidence 9999999999885 368899998777799999999999999988899999999877543211 1234679999999999
Q ss_pred CcccceecCCccEEEEEeeeeccCC---CccCceeeEeccchhHHHHHHHhccccccccCCCchh---HHHHHHcCC---
Q 015960 239 NSGGPLLDSSGSLIGVNTSIITRTD---AFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHD---QLLEKLMGI--- 309 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~~~~~~---~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~lGi~~~---~~~~~~~~~--- 309 (397)
+|||||+|.+|+||||+++.....+ ...+++|+||++.+++++++|+++|++.++|||+... +..++.+++
T Consensus 164 ~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~g~~~~ 243 (318)
T 1te0_A 164 NSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQL 243 (318)
T ss_dssp TTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCSSSSCSSSC
T ss_pred CCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecchhHHHhccCCCC
Confidence 9999999999999999998875431 3567999999999999999999999999999999543 222333444
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
.|++|..|.++|||+++||++ ||+|++|||++|.++.++..++...++|++++|+|+|+|+.+++++++
T Consensus 244 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 312 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGIQV-----------NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTI 312 (318)
T ss_dssp CCEEEEEECTTSTTTTTCCCT-----------TCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCEEEEEEEC
T ss_pred CcEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEE
Confidence 689999999999999999999 999999999999999999999988789999999999999999999999
Q ss_pred eeCCC
Q 015960 390 EVEPD 394 (397)
Q Consensus 390 ~~~~~ 394 (397)
.+.|.
T Consensus 313 ~~~~~ 317 (318)
T 1te0_A 313 QEYPA 317 (318)
T ss_dssp EECCC
T ss_pred ccCCC
Confidence 87764
No 5
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=3.3e-52 Score=419.02 Aligned_cols=300 Identities=34% Similarity=0.554 Sum_probs=251.0
Q ss_pred ccchHHHHHHHcCCceEEEEeeec-------------cc-ccccc-----------CCCCceeEEEEEcCC-CEEEEccc
Q 015960 79 DEVETAGIFEENLPSVVHITNFGM-------------NT-FTLTM-----------EYPQATGTGFIWDED-GHIVTNHH 132 (397)
Q Consensus 79 ~~~~~~~~~~~~~~sVV~I~~~~~-------------~~-~~~~~-----------~~~~~~GSG~ii~~~-G~ILT~aH 132 (397)
...++.++++++.||||+|.+... ++ |...+ ....+.||||+|+++ ||||||+|
T Consensus 17 ~~~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~H 96 (451)
T 3pv2_A 17 NMPSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDH 96 (451)
T ss_dssp -CCCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHH
T ss_pred CCCCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChH
Confidence 334689999999999999987642 11 11011 112367999999974 99999999
Q ss_pred ccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCC-----Cceee
Q 015960 133 VIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRK-----FTCTA 207 (397)
Q Consensus 133 vv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~ 207 (397)
||.++..+.|.+.|++.++|++++.|+.+||||||++. ..+++++++++..++.|++|+++|||++.. .+++.
T Consensus 97 Vv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~--~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~vt~ 174 (451)
T 3pv2_A 97 VIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA--KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATF 174 (451)
T ss_dssp HHTTEEEEEEECTTSCEEECEEEEEETTTTEEEEECCC--SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCEEEE
T ss_pred HhCCCCEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC--cCCceeEecCcccCCCCCEEEEEECCCCccccccCCceeE
Confidence 99999999999999999999999999999999999976 478999998888899999999999999987 89999
Q ss_pred eEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 208 GIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 208 G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
|+|++..+..... ..+..++++|+++++|||||||+|.+|+||||+++.+...+...+++||||++.+++++++|+++
T Consensus 175 Givs~~~r~~~~~--~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~ 252 (451)
T 3pv2_A 175 GIVSALKRSDLNI--EGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKF 252 (451)
T ss_dssp EEEEEEC------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHH
T ss_pred EEEeeccccccCC--CCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhc
Confidence 9999987752211 22356899999999999999999999999999999887666677899999999999999999999
Q ss_pred cccccccCCCc---hhHHHHHHcCC----CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHH
Q 015960 288 GKIIRPYLGIA---HDQLLEKLMGI----SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLH 360 (397)
Q Consensus 288 g~~~~~~lGi~---~~~~~~~~~~~----~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~ 360 (397)
|++.|+|||+. .++..++.+++ .|++|..|.++|||+++||++ ||+|++|||++|.++.++.
T Consensus 253 g~v~r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~vnG~~v~~~~~l~ 321 (451)
T 3pv2_A 253 GSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKA-----------GDIITQINDTKITQATQVK 321 (451)
T ss_dssp SSCCCCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHH
T ss_pred CCcccccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCC-----------CCEEEEECCEEcCCHHHHH
Confidence 99999999994 34566666665 589999999999999999999 9999999999999999999
Q ss_pred HHHhcCCCCCEEEEEEEECCeEEEEEEEeeeCC
Q 015960 361 NILDQCKVGDEVIVRILRGTQLEEILIILEVEP 393 (397)
Q Consensus 361 ~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 393 (397)
.++....+|++++++|+|+|+++++++++.+.+
T Consensus 322 ~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~ 354 (451)
T 3pv2_A 322 TTISLLRVGSTVKIIVERDNKPLTLSAVVTDIK 354 (451)
T ss_dssp HHHHTSCTTCEEEEEEEETTEEEEEEEECBCHH
T ss_pred HHHHhcCCCCEEEEEEEECCEEEEEEEEEccCC
Confidence 999988899999999999999999999886543
No 6
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=6.7e-51 Score=412.98 Aligned_cols=289 Identities=26% Similarity=0.378 Sum_probs=240.1
Q ss_pred HcCCceEEEEeeecccccc----ccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEec-CCcEEEEEEEEEcCCCCe
Q 015960 89 ENLPSVVHITNFGMNTFTL----TMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLF-DKTTLDAKVVGHDQGTDL 163 (397)
Q Consensus 89 ~~~~sVV~I~~~~~~~~~~----~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~-~g~~~~a~vv~~d~~~Dl 163 (397)
.+.+|||+|.+....+.+. ......+.||||+|+ +||||||+|||+++..+.|++. |++.++|++++.|+..||
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DL 123 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDI 123 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCE
Confidence 3568999999876543321 223345789999998 6899999999999999999985 899999999999999999
Q ss_pred EEEEEcCCCC--CcceeecCCCCCCCCCCeEEEEecCCCCCC-ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCc
Q 015960 164 AVLHIDAPNH--KLRSIPVGVSANLRIGQKVYAIGHPLGRKF-TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNS 240 (397)
Q Consensus 164 AlL~v~~~~~--~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 240 (397)
||||++.+.. .++++.++ ..++.|++|+++|||++... +++.|+|+++.+..... +.....+||+|+++++|||
T Consensus 124 AvLkv~~~~~~~~~~pl~~g--~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~-~~~~~~~IQtDAaInpGnS 200 (539)
T 4fln_A 124 ALLSVESEDFWKGAEPLRLG--HLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSDLLGIQIDAAINPGNS 200 (539)
T ss_dssp EEEEECCSSSSTTCCCCCBC--CCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTT-SCCEEEEEEESSCCCTTTT
T ss_pred EEEEEeCCcCCcCCceeecC--CcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCC-CCcceeEEEEEeEecCCCc
Confidence 9999987532 23455554 45688999999999998754 89999999988765432 3333457999999999999
Q ss_pred ccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhccccc-cccCCCch----hHHHHHHcCC---CCc
Q 015960 241 GGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKII-RPYLGIAH----DQLLEKLMGI---SGG 312 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~~~-~~~lGi~~----~~~~~~~~~~---~g~ 312 (397)
||||||.+|+||||+++.+... ...+++||||++.+++++++|+++|++. |||||+.. ++..++.+++ .|+
T Consensus 201 GGPLvn~~GeVIGIntai~~~~-~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~~~Gv 279 (539)
T 4fln_A 201 GGPAFNDQGECIGVAFQVYRSE-ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEGV 279 (539)
T ss_dssp TSEEECSSSCEEEEECCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSSSBCE
T ss_pred cchhccCCCcEEEEEEEEecCC-CCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCCcCce
Confidence 9999999999999999887543 3568999999999999999999999987 89999943 3455666665 699
Q ss_pred EEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHH----------HHHHHhcCCCCCEEEEEEEECCeE
Q 015960 313 VIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAND----------LHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 313 ~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d----------~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
+|.+|.++|||+++ |++ ||+|++|||++|.+..+ +..++..+++|++++|+|+|+|++
T Consensus 280 ~V~~V~~~spA~~a-l~~-----------GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~ 347 (539)
T 4fln_A 280 LVRRVEPTSDASKV-LKE-----------GDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEH 347 (539)
T ss_dssp EEEEECTTSGGGGT-CCT-----------TCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEE
T ss_pred eeecccCCChHHhC-ccC-----------CCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 99999999999887 999 99999999999976544 778888889999999999999999
Q ss_pred EEEEEEeeeCCC
Q 015960 383 EEILIILEVEPD 394 (397)
Q Consensus 383 ~~~~v~l~~~~~ 394 (397)
+++++++.+++.
T Consensus 348 ~~v~Vtl~~~~~ 359 (539)
T 4fln_A 348 KKVQVVLRPRVH 359 (539)
T ss_dssp EEEEEECBCCCC
T ss_pred EEEEEEEccCcc
Confidence 999999987764
No 7
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=7.4e-50 Score=386.83 Aligned_cols=291 Identities=32% Similarity=0.453 Sum_probs=248.3
Q ss_pred chHHHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCC---------eEEEEecCCcEEE
Q 015960 81 VETAGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGAS---------SVKVTLFDKTTLD 151 (397)
Q Consensus 81 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~---------~i~V~~~~g~~~~ 151 (397)
.++.++++++.||||+|..... .....||||+|+++||||||+||+.+.. .+.|++.+++.++
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~--------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~~~~ 77 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG--------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAP 77 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCCEEC
T ss_pred ccHHHHHHHhcCcEEEEEEEcc--------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCCEEE
Confidence 4688999999999999986431 2356899999998889999999998765 8999999999999
Q ss_pred EEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCC--C--CCccc
Q 015960 152 AKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITAT--G--PPIQG 227 (397)
Q Consensus 152 a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~--~--~~~~~ 227 (397)
++++.+|+..||||||++.+ ..+++++|+++..+..|++|+++|||.+...+++.|+++...+...... + .....
T Consensus 78 a~vv~~d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~~~~ 156 (324)
T 1y8t_A 78 FTVVGADPTSDIAVVRVQGV-SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLD 156 (324)
T ss_dssp EEEEECCTTTTEEEEEECSC-CSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CCCEE
T ss_pred EEEEEeCCCCCEEEEEECCC-CCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccccCC
Confidence 99999999999999999986 4789999987777899999999999998888889999998765432111 1 12356
Q ss_pred EEEEccccCCCCcccceecCCccEEEEEeeeeccC-------CCccCceeeEeccchhHHHHHHHhccccccccCCCchh
Q 015960 228 LIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRT-------DAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHD 300 (397)
Q Consensus 228 ~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~-------~~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~lGi~~~ 300 (397)
++++|+.+|+|||||||+|.+|+||||+++..... ....+++||||++.+++++++|+++|++.++|||+...
T Consensus 157 ~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi~~~ 236 (324)
T 1y8t_A 157 AIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVT 236 (324)
T ss_dssp EEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCEEEE
T ss_pred EEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccceEee
Confidence 89999999999999999999999999999976542 23467999999999999999999999999999999654
Q ss_pred HHHHHHcCCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEE-C
Q 015960 301 QLLEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILR-G 379 (397)
Q Consensus 301 ~~~~~~~~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R-~ 379 (397)
.. ....|++|..|.++|||+++||++ ||+|++|||++|.++.++..++...++|++++|+|+| +
T Consensus 237 ~~----~~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~ 301 (324)
T 1y8t_A 237 ND----KDTLGAKIVEVVAGGAAANAGVPK-----------GVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPS 301 (324)
T ss_dssp SC----SSSSSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSS
T ss_pred ec----cCCCceEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 21 124789999999999999999999 9999999999999999999999877889999999999 9
Q ss_pred CeEEEEEEEeeeCCCC
Q 015960 380 TQLEEILIILEVEPDE 395 (397)
Q Consensus 380 g~~~~~~v~l~~~~~~ 395 (397)
|+++++++++.+++..
T Consensus 302 g~~~~~~v~~~~~~~~ 317 (324)
T 1y8t_A 302 GGSRTVQVTLGKAEQL 317 (324)
T ss_dssp CCEEEEEEECEEC---
T ss_pred CCEEEEEEEEccCCCc
Confidence 9999999999877643
No 8
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1e-50 Score=407.92 Aligned_cols=297 Identities=35% Similarity=0.581 Sum_probs=253.5
Q ss_pred hHHHHHHHcCCceEEEEeeecc---------ccccccC-------------------------------CCCceeEEEEE
Q 015960 82 ETAGIFEENLPSVVHITNFGMN---------TFTLTME-------------------------------YPQATGTGFIW 121 (397)
Q Consensus 82 ~~~~~~~~~~~sVV~I~~~~~~---------~~~~~~~-------------------------------~~~~~GSG~ii 121 (397)
++.++++++.||||.|.+.... .|...+. ...+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 6889999999999999865431 1110000 01257999999
Q ss_pred cCC-CEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCC
Q 015960 122 DED-GHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLG 200 (397)
Q Consensus 122 ~~~-G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g 200 (397)
+++ ||||||+||+.++..+.|++.|++.++|++++.|+.+||||||++.+ ..+++++++++..++.||+|+++|||++
T Consensus 94 ~~~~g~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~P~g 172 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNP-KNLTAIKMADSDALRVGDYTVAIGNPFG 172 (448)
T ss_dssp ETTTTEEEEEHHHHTTEEEEEEEETTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTCEEEEEECTTS
T ss_pred ECCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEEecccccCCCCCEEEEEECCCC
Confidence 977 99999999999999999999999999999999999999999999864 3789999998888999999999999999
Q ss_pred CCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHH
Q 015960 201 RKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGI 280 (397)
Q Consensus 201 ~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~ 280 (397)
...+++.|+|++..+.... ...+..++++|+++++|+|||||+|.+|+||||+++.+...++..+++||||++.++++
T Consensus 173 ~~~tvt~Givs~~~r~~~~--~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~ 250 (448)
T 1ky9_A 173 LGETVTSGIVSALGRSGLN--AENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL 250 (448)
T ss_dssp SSCEEEEEEEEEESSCC-------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHHH
T ss_pred CCCeEEeEEEeeccccccC--CCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchhh
Confidence 9899999999998775211 12235789999999999999999999999999999987665556789999999999999
Q ss_pred HHHHHhccccccccCCCch---hHHHHHHcCC---CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC
Q 015960 281 VDQLVKFGKIIRPYLGIAH---DQLLEKLMGI---SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS 354 (397)
Q Consensus 281 ~~~l~~~g~~~~~~lGi~~---~~~~~~~~~~---~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~ 354 (397)
+++|+++|++.|+|||+.. ++..++.+++ .|++|.+|.++|||+++||++ ||+|++|||++|.
T Consensus 251 ~~~l~~~g~v~~~~LGv~~~~~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~-----------GDvI~~inG~~v~ 319 (448)
T 1ky9_A 251 TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKA-----------GDVITSLNGKPIS 319 (448)
T ss_dssp HHHHHHHSSCCBCCCCCSCCCTTSHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCT-----------TCEECBSSSSBCC
T ss_pred HHHHhhhcccceeccccccccccHHHHHHhCCCCCCceEEEEeccCCHHHHcCCCC-----------CCEEEEECCEEcC
Confidence 9999999999999999943 3455666666 599999999999999999999 9999999999999
Q ss_pred CHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeeC
Q 015960 355 NANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVE 392 (397)
Q Consensus 355 ~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 392 (397)
++.++..++...++|++++|+|+|+|+.+++++++.+.
T Consensus 320 ~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 357 (448)
T 1ky9_A 320 SFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQS 357 (448)
T ss_dssp SSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC----
T ss_pred CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecC
Confidence 99999999987788999999999999998888776543
No 9
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=3.6e-49 Score=381.84 Aligned_cols=290 Identities=33% Similarity=0.488 Sum_probs=236.4
Q ss_pred chHHHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCC
Q 015960 81 VETAGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQG 160 (397)
Q Consensus 81 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~ 160 (397)
..+.++++++.||||+|.....+++. ......+.||||+|+++||||||+||+.++..+.|++.+++.++++++++|+.
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~~~~~-~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~d~~ 93 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDRHPFL-GREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVDPV 93 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEEETTT-TEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEEETT
T ss_pred hHHHHHHHHhCCcEEEEEEEecCccC-CCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEECCC
Confidence 45789999999999999875432221 11112468999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCC-CCCCcccEEEEccccCCCC
Q 015960 161 TDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITA-TGPPIQGLIQIDAAINRGN 239 (397)
Q Consensus 161 ~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~-~~~~~~~~i~~~~~i~~G~ 239 (397)
+||||||++.+. .+++++|+++..+..|++|+++|||.+...+++.|+|+...+..... .......++++|+.+|+|+
T Consensus 94 ~DlAllkl~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~~G~ 172 (325)
T 1lcy_A 94 ADIATLRIQTKE-PLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAIDFGN 172 (325)
T ss_dssp TTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESSCCSTTT
T ss_pred CCEEEEEEcCCC-CCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcCCCCCCC
Confidence 999999998753 68899998777789999999999999988899999999876642111 0112246799999999999
Q ss_pred cccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc------cccccccCCCc---hhHHHHHHcCC-
Q 015960 240 SGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF------GKIIRPYLGIA---HDQLLEKLMGI- 309 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~------g~~~~~~lGi~---~~~~~~~~~~~- 309 (397)
|||||+|.+|+||||+++... .+++|+||++.+++++++++++ +.+.|+|+|+. +++...+.+++
T Consensus 173 SGGPl~~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~~~~~~~~l~ 247 (325)
T 1lcy_A 173 AGGPLVNLDGEVIGVNTMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILAELQLR 247 (325)
T ss_dssp TTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHTCC---------------EECCEEEEECCHHHHHHHTTS
T ss_pred ccccEECCCCEEEEEEeEeec-----CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCHHHHHhhCcc
Confidence 999999999999999999863 4589999999999999998775 46789999993 33444444443
Q ss_pred --------CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 --------SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 --------~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|.+|.++|||+++||++ ||+|++|||++|.++.|+.+++.. ++++.|+|+|+|+
T Consensus 248 ~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GDvI~~ing~~v~~~~~l~~~l~~---~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 248 EPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQNAEDVYEAVRT---QSQLAVQIRRGRE 313 (325)
T ss_dssp CTTSCCCSSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHHTT---CSSEEEEEEETTE
T ss_pred ccccccCCCCeEEEEeCcCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHhC---CCeEEEEEEECCE
Confidence 589999999999999999999 999999999999999999999864 5789999999999
Q ss_pred EEEEEEEeee
Q 015960 382 LEEILIILEV 391 (397)
Q Consensus 382 ~~~~~v~l~~ 391 (397)
.+++++++..
T Consensus 314 ~~~~~v~~~~ 323 (325)
T 1lcy_A 314 TLTLYVTPEV 323 (325)
T ss_dssp EEEEEECCEE
T ss_pred EEEEEEEEec
Confidence 9998887654
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=5e-49 Score=382.12 Aligned_cols=297 Identities=34% Similarity=0.489 Sum_probs=162.2
Q ss_pred CcccchHHHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEE
Q 015960 77 KTDEVETAGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVG 156 (397)
Q Consensus 77 ~~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~ 156 (397)
.....++.++++++.||||+|......++. ......+.||||+|+++|||||||||+.++..+.|.+.+++.++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~sVV~I~~~~~~~~~-~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~~g~~~~a~~~~ 88 (332)
T 3num_A 10 RHKYNFIADVVEKIAPAVVHIELFRKLPFS-KREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKD 88 (332)
T ss_dssp HHHHCHHHHHHHHHGGGEEEEEEEEECTTS-SCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEETTSCEEEEEEEE
T ss_pred ccccchHHHHHHHhcCcEEEEEEEeccccC-CCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEECCCCEEEEEEEE
Confidence 335567889999999999999886543322 1122346899999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCC-CCCCcccEEEEcccc
Q 015960 157 HDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITA-TGPPIQGLIQIDAAI 235 (397)
Q Consensus 157 ~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~-~~~~~~~~i~~~~~i 235 (397)
.|+.+|||||+++.+. .+++++++++..+..|+.|+++|||.+...+++.|+++...+..... .......++++|+.+
T Consensus 89 ~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d~~i 167 (332)
T 3num_A 89 VDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAII 167 (332)
T ss_dssp EETTTTEEEEEECCSS-CCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEESSCC
T ss_pred ecCCCCeEEEEEcCCC-CCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEEECCc
Confidence 9999999999999863 68888998878899999999999999988899999998876643211 111224678999999
Q ss_pred CCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh-----ccccccccCCCchhH---HHHHHc
Q 015960 236 NRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK-----FGKIIRPYLGIAHDQ---LLEKLM 307 (397)
Q Consensus 236 ~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~-----~g~~~~~~lGi~~~~---~~~~~~ 307 (397)
++|+|||||+|.+|+||||+++... .+++|+||++.++++++++.+ .+.+.++|||+.... ...+.+
T Consensus 168 ~~G~SGGPlv~~~G~vvGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~~~~~~ 242 (332)
T 3num_A 168 NYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSKAKEL 242 (332)
T ss_dssp CTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHCC-----------------------------
T ss_pred CCCCcHHHhhCCCCcEEEEEeeEec-----ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHHHhhhh
Confidence 9999999999999999999999864 468999999999999999863 234678999995432 111111
Q ss_pred ---------CCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEE
Q 015960 308 ---------GISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILR 378 (397)
Q Consensus 308 ---------~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R 378 (397)
...|++|.+|.++|||+++||++ ||+|++|||++|.++.|+..++.. |++++|+|+|
T Consensus 243 ~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~---~~~v~l~v~R 308 (332)
T 3num_A 243 KDRHRDFPDVISGAYIIEVIPDTPAEAGGLKE-----------NDVIISINGQSVVSANDVSDVIKR---ESTLNMVVRR 308 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhccccCCCCCceEEEEeccCCChHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhC---CCeEEEEEEE
Confidence 12689999999999999999999 999999999999999999988853 7889999999
Q ss_pred CCeEEEEEEEeeeCCC
Q 015960 379 GTQLEEILIILEVEPD 394 (397)
Q Consensus 379 ~g~~~~~~v~l~~~~~ 394 (397)
+|+++++++++..+.+
T Consensus 309 ~g~~~~~~v~p~~~~~ 324 (332)
T 3num_A 309 GNEDIMITVIPEEIDP 324 (332)
T ss_dssp ----------------
T ss_pred CCEEEEEEEEEeeecc
Confidence 9999999988876643
No 11
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=5.7e-39 Score=297.58 Aligned_cols=211 Identities=36% Similarity=0.612 Sum_probs=165.4
Q ss_pred chHHHHHHHcCCceEEEEeeeccc--------ccccc---------CCCCceeEEEEEcCC-CEEEEcccccCCCCeEEE
Q 015960 81 VETAGIFEENLPSVVHITNFGMNT--------FTLTM---------EYPQATGTGFIWDED-GHIVTNHHVIEGASSVKV 142 (397)
Q Consensus 81 ~~~~~~~~~~~~sVV~I~~~~~~~--------~~~~~---------~~~~~~GSG~ii~~~-G~ILT~aHvv~~~~~i~V 142 (397)
.++.++++++.||||+|.+..... +.... ....+.||||+|+++ ||||||+||+.++..+.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V 92 (245)
T 3sti_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (245)
T ss_dssp CBSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEEE
T ss_pred CCHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEE
Confidence 468899999999999998764321 10000 112578999999987 999999999999999999
Q ss_pred EecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCC
Q 015960 143 TLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATG 222 (397)
Q Consensus 143 ~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~ 222 (397)
.+.+++.+++++++.|+.+||||||++.+ ..+++++++++..++.|++|+++|||++...+++.|+|+...+.... .
T Consensus 93 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~~~~--~ 169 (245)
T 3sti_A 93 QLNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLN--L 169 (245)
T ss_dssp ECTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSCSSC--C
T ss_pred EECCCCEEEEEEEEecCCCCEEEEEeccC-CCCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeecccccC--C
Confidence 99999999999999999999999999865 37899999888889999999999999999999999999998775221 1
Q ss_pred CCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhcccccccc
Q 015960 223 PPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPY 294 (397)
Q Consensus 223 ~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~ 294 (397)
.....++++|+.+++|+|||||+|.+|+||||+++.+...++..+++||||++.+++++++|+++|++.++|
T Consensus 170 ~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~~~~ 241 (245)
T 3sti_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEILEHH 241 (245)
T ss_dssp TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC---
T ss_pred CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCCCcc
Confidence 223567999999999999999999999999999998876666778999999999999999999999987765
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=2.3e-39 Score=299.57 Aligned_cols=216 Identities=38% Similarity=0.619 Sum_probs=171.0
Q ss_pred chHHHHHHHcCCceEEEEeeeccc----------c---cccc-----CCC-CceeEEEEEcCCCEEEEcccccCCCCeEE
Q 015960 81 VETAGIFEENLPSVVHITNFGMNT----------F---TLTM-----EYP-QATGTGFIWDEDGHIVTNHHVIEGASSVK 141 (397)
Q Consensus 81 ~~~~~~~~~~~~sVV~I~~~~~~~----------~---~~~~-----~~~-~~~GSG~ii~~~G~ILT~aHvv~~~~~i~ 141 (397)
.++.++++++.||||+|.+..... + .+.. ... .+.||||+|+++||||||+||+.++..+.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~ 83 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNIT 83 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCE
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEE
Confidence 357889999999999998864311 0 0000 011 46799999998899999999999999999
Q ss_pred EEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCC
Q 015960 142 VTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITAT 221 (397)
Q Consensus 142 V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~ 221 (397)
|.+.+++.++++++++|+.+||||||++.+...+++++|+++..++.|++|+++|||.+...+++.|+++...+......
T Consensus 84 V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~ 163 (239)
T 1l1j_A 84 VTMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPD 163 (239)
T ss_dssp EECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTT
T ss_pred EEECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEeccccccccCC
Confidence 99999999999999999999999999987534789999987777899999999999999888999999998876532211
Q ss_pred C-CCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhccccccccCCC
Q 015960 222 G-PPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKIIRPYLGI 297 (397)
Q Consensus 222 ~-~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~lGi 297 (397)
+ .....++++|+.+|+|||||||+|.+|+||||+++... .+...+++||||++.+++++++|+++|++.|||||+
T Consensus 164 ~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~-~~~~~g~~faIP~~~~~~~~~~l~~~g~v~r~~lGv 239 (239)
T 1l1j_A 164 GSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVN-PQEAVNLGFAIPINTVKKFLDTILTQKKVEKAYLGV 239 (239)
T ss_dssp SSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSC-CCSCCSCEEEEEHHHHHHHHGGGCC-----------
T ss_pred CccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeec-CCCcCceEEEEEHHHHHHHHHHHHHCCCCccceeCc
Confidence 1 11356899999999999999999999999999999865 334568999999999999999999999999999996
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=1.6e-37 Score=287.26 Aligned_cols=214 Identities=37% Similarity=0.529 Sum_probs=180.9
Q ss_pred ccchHHHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEc
Q 015960 79 DEVETAGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD 158 (397)
Q Consensus 79 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d 158 (397)
...++.++++++.+|||+|.....+..+.......+.||||+|+++||||||+||+.++..+.|.+.+++.++++++..|
T Consensus 18 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~~g~~~~a~vv~~d 97 (237)
T 3lgi_A 18 TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSD 97 (237)
T ss_dssp CCCBCHHHHHHHGGGEEEEEEECCTTTCTTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEEE
T ss_pred CCcCHHHHHHHhCCcEEEEEEEecccCcccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeCCCCEEEEEEEEEc
Confidence 44568889999999999999876543322222334689999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCC
Q 015960 159 QGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRG 238 (397)
Q Consensus 159 ~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G 238 (397)
+.+||||||++.+. .+++++++++..+..|+.|+++|||.+....++.|+++...+..... .....++++|+.+++|
T Consensus 98 ~~~DlAll~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~--~~~~~~i~~d~~i~~G 174 (237)
T 3lgi_A 98 SLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP--TGRQNFLQTDASINHG 174 (237)
T ss_dssp TTTTEEEEECCCSS-CCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCT--TSCSCCEEECSCCCTT
T ss_pred CCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccC--CCcCCEEEEcCccCCC
Confidence 99999999998753 58889998777899999999999999988899999999887654322 2235679999999999
Q ss_pred CcccceecCCccEEEEEeeeeccCC---CccCceeeEeccchhHHHHHHHhccccccccC
Q 015960 239 NSGGPLLDSSGSLIGVNTSIITRTD---AFCGMACSIPIDTVSGIVDQLVKFGKIIRPYL 295 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~~~~~~---~~~~~~~aip~~~i~~~~~~l~~~g~~~~~~l 295 (397)
+|||||+|.+|+||||+++.+.... ...+++||||++.+++++++|+++|+..++++
T Consensus 175 ~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~~~~~ 234 (237)
T 3lgi_A 175 NSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRHHH 234 (237)
T ss_dssp CTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC---
T ss_pred CchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCCCchh
Confidence 9999999999999999999876532 36679999999999999999999999887664
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=4.5e-35 Score=269.68 Aligned_cols=202 Identities=38% Similarity=0.525 Sum_probs=166.2
Q ss_pred cccchHHHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEE
Q 015960 78 TDEVETAGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGH 157 (397)
Q Consensus 78 ~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~ 157 (397)
.....+.++++++.||||+|......++.. .....+.||||+|+++||||||+||+.+...+.|.+.+++.++++++..
T Consensus 28 ~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~-~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~~g~~~~a~v~~~ 106 (231)
T 3tjo_A 28 HKYNFIADVVEKIAPAVVHIELFRKLPFSK-REVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDV 106 (231)
T ss_dssp HHSCHHHHHHHHHGGGEEEEEEEEECTTSS-CEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECTTSCEEEEEEEEE
T ss_pred chhhHHHHHHHHhcCcEEEEEEEeccccCC-CccccceEEEEEEeCCCEEEEchhcccCCceEEEEcCCCCEEEEEEEEe
Confidence 345678899999999999998765433221 1122368999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCC-CCCCcccEEEEccccC
Q 015960 158 DQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITA-TGPPIQGLIQIDAAIN 236 (397)
Q Consensus 158 d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~-~~~~~~~~i~~~~~i~ 236 (397)
|+.+||||||++.+ ..+++++++++..+..|+.|+++|||.+....++.|+++...+..... ........+++|+.++
T Consensus 107 d~~~DlAlL~l~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i~ 185 (231)
T 3tjo_A 107 DEKADIALIKIDHQ-GKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIIN 185 (231)
T ss_dssp ETTTTEEEEECCCS-SCCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEESSCCC
T ss_pred cCCCCEEEEEecCC-CCCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEcCCcC
Confidence 99999999999975 368888998777889999999999999888888999998876643211 1112246789999999
Q ss_pred CCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 237 RGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 237 ~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
+|+|||||+|.+|+||||+++... .+++||||++.++++++++++
T Consensus 186 ~G~SGGPLv~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 186 YGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp TTTTTSEEECTTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCCchhHeecCCCeEEEEEeEEec-----CCeEEEEEHHHHHHHHHHHhh
Confidence 999999999999999999999863 468999999999999999875
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.97 E-value=1e-30 Score=241.52 Aligned_cols=197 Identities=24% Similarity=0.337 Sum_probs=159.5
Q ss_pred chHHHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCC
Q 015960 81 VETAGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQG 160 (397)
Q Consensus 81 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~ 160 (397)
....++++++.+|||+|.....+ ....+.||||+|+ +|||||||||+.+...+.|.+.+ ..++++++..|+.
T Consensus 31 ~~~~~~~~~~~~svV~I~~~~~~------~~~~~~GsG~iI~-~~~VlTaaH~v~~~~~~~V~~~~-~~~~~~~v~~~~~ 102 (237)
T 3k6y_A 31 LVNNPVVAATEPSVVKIRSLAPR------CQKVLEGTGFVIS-PDRVMTNAHVVAGSNNVTVYAGD-KPFEATVVSYDPS 102 (237)
T ss_dssp GGGCHHHHHHGGGEEEEEEEEGG------GTEEEEEEEEEEE-TTEEEECGGGTTTCSEEEEEETT-EEEECEEEEEETT
T ss_pred cccHHHHHHhcCCEEEEEEEecC------CCcceeEEEEEEE-CCEEEECHHHcCCCceEEEEECC-cEEEEEEEEEcCC
Confidence 34467899999999999875421 1234589999999 67999999999999999999988 5889999999999
Q ss_pred CCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccC---CCCC-CcccEEEEccccC
Q 015960 161 TDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPIT---ATGP-PIQGLIQIDAAIN 236 (397)
Q Consensus 161 ~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~---~~~~-~~~~~i~~~~~i~ 236 (397)
+||||||++. ..+++++|. +..+..|+.++++|||++.....+.|.++...+.... ..+. ....++++++.++
T Consensus 103 ~DiAll~l~~--~~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (237)
T 3k6y_A 103 VDVAILAVPH--LPPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVE 179 (237)
T ss_dssp TTEEEEECTT--CCSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEESCCC
T ss_pred CCEEEEEeCC--CCCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecCccC
Confidence 9999999985 468888887 5678999999999999988878888887665432211 1111 2345789999999
Q ss_pred CCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhccccc
Q 015960 237 RGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGKII 291 (397)
Q Consensus 237 ~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~~~ 291 (397)
+|||||||+|.+|+||||+++.... ..+++|+||++.++++++++...+.+.
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~~~~~---~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEEECSS---STTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred CCccHHHEECCCCEEEEEEEeeccC---CCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999987543 346899999999999999985554443
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.92 E-value=2.7e-24 Score=186.43 Aligned_cols=138 Identities=20% Similarity=0.255 Sum_probs=105.1
Q ss_pred CCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCe
Q 015960 112 PQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQK 191 (397)
Q Consensus 112 ~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~ 191 (397)
..+.||||+| +||||||+||++++..+.|++ |++.++|+++ .|+..||||||++.....+.+++++++.. .+.
T Consensus 19 ~~~~GSGfii--~g~IlTn~HVV~~~~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~~---~~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS--GNDIVTAAHVVGNNTFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNPD---YSC 91 (163)
T ss_dssp TTEEEEEEEE--TTEEEEEHHHHTTCSEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSCC---TTE
T ss_pred CceeEEEEEE--CCEEEecHHHhCCCceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCCC---CCE
Confidence 4578999999 689999999999999999999 9999999999 89999999999997543455566765432 489
Q ss_pred EEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceee
Q 015960 192 VYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACS 271 (397)
Q Consensus 192 V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~a 271 (397)
|+++|+|.+. . .++...... ....+++++++++|||||||+|.+|+||||++.... ..+ +|+
T Consensus 92 v~~~G~p~~~---~---~~s~~~~~~-------~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~g----~~g-g~a 153 (163)
T 2w5e_A 92 VTVMAYVNED---L---VVSTAAAMV-------YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNTG----YTG-GAV 153 (163)
T ss_dssp EEEEEEETTE---E---EEEEEEEEE-------ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEET----TEE-EEE
T ss_pred EEEEEeCCCC---E---EEEEeccEE-------cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCcc----ccc-CEE
Confidence 9999999652 1 111111110 123577889999999999999999999999986542 233 666
Q ss_pred Eec
Q 015960 272 IPI 274 (397)
Q Consensus 272 ip~ 274 (397)
|..
T Consensus 154 i~~ 156 (163)
T 2w5e_A 154 IID 156 (163)
T ss_dssp ECC
T ss_pred Eec
Confidence 643
No 17
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.91 E-value=7.4e-24 Score=191.93 Aligned_cols=158 Identities=21% Similarity=0.343 Sum_probs=123.5
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCC---eEEEEe----cCCcEEEEE-EEEEcCCCCeEEEEEcCCC-----------C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGAS---SVKVTL----FDKTTLDAK-VVGHDQGTDLAVLHIDAPN-----------H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~---~i~V~~----~~g~~~~a~-vv~~d~~~DlAlL~v~~~~-----------~ 173 (397)
...||||+|++ +||||||||+.+.. .+.|.+ .+++.++++ ++.+|+..||||||++.+. .
T Consensus 22 ~~~c~G~lI~~-~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~~DiAll~l~~~~~~~~~~~~~~~~ 100 (210)
T 2as9_A 22 FKDATGFVIGK-NTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNE 100 (210)
T ss_dssp CSSCEEEEEET-TEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSSSSCEEEEECSEEEEEETTEEEGGG
T ss_pred eeeEEEEEEeC-CEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCCCcEEEEEecCcccccccccccccc
Confidence 35799999997 59999999997543 566654 367888884 7788899999999998731 1
Q ss_pred CcceeecCCCCCCCCCCeEEEEecCCCCCCc----eeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCc
Q 015960 174 KLRSIPVGVSANLRIGQKVYAIGHPLGRKFT----CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSG 249 (397)
Q Consensus 174 ~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~----~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G 249 (397)
.++++++. ..+..|+.++++|||.+.... ++.|+++... ...+++++.+|+|+|||||+|.+|
T Consensus 101 ~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~-----------~~~i~~~~~~~~GdSGGPlv~~~g 167 (210)
T 2as9_A 101 NVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK-----------DNILNFDAYIEPGNSGSPVLNSNN 167 (210)
T ss_dssp SCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE-----------TTEEEEECCCCTTCTTCEEECTTS
T ss_pred ccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc-----------CCeEEEcCccCCCCccCcEECCCC
Confidence 35667774 467899999999999865433 3667776542 245788999999999999999899
Q ss_pred cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 250 SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 250 ~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
+||||++++....+ ....+|++|.+.++++++...
T Consensus 168 ~lvGI~s~g~~~~~-~~~~~~~~~~~~i~~f~~~~~ 202 (210)
T 2as9_A 168 EVIGVVYGGIGKIG-SEYNGAVYFTPQIKDFIQKHI 202 (210)
T ss_dssp CEEEEECCSCCCTT-CSSEEEEECCHHHHHHHHTTC
T ss_pred eEEEEEecccccCC-ccccccEEEcHHHHHHHHHhh
Confidence 99999999876543 355789999999999888654
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.89 E-value=1.5e-22 Score=187.29 Aligned_cols=161 Identities=24% Similarity=0.394 Sum_probs=119.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCe--EEEEecCC-------------cEEEEEEEEEcC---CCCeEEEEEcCCCC-
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASS--VKVTLFDK-------------TTLDAKVVGHDQ---GTDLAVLHIDAPNH- 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~--i~V~~~~g-------------~~~~a~vv~~d~---~~DlAlL~v~~~~~- 173 (397)
...|+||+|++ +||||||||+.+... +.|.+.+| ..+.++.+..++ .+||||||++.+..
T Consensus 54 ~~~c~G~lI~~-~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~ 132 (242)
T 1agj_A 54 QTSATGVLIGK-NTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNG 132 (242)
T ss_dssp TEEEEEEECSS-SEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CccEEEEEEeC-CEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcc
Confidence 35899999997 599999999976543 45555433 247788888887 89999999998631
Q ss_pred -----CcceeecCCCCCCCCCCeEEEEecCCCCCCc-eeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecC
Q 015960 174 -----KLRSIPVGVSANLRIGQKVYAIGHPLGRKFT-CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDS 247 (397)
Q Consensus 174 -----~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~ 247 (397)
.+++++|..+..+..|+.++++|||.+.... .....+.... ....+++++.+|+|+|||||++.
T Consensus 133 ~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~c~GdSGGPl~~~ 202 (242)
T 1agj_A 133 VSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT----------LSRGLRYYGFTVPGNSGSGIFNS 202 (242)
T ss_dssp CCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC----------GGGSEEEECCCCGGGTTCEEECT
T ss_pred ccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec----------CCceEEEeCCcCCCCCchHhccc
Confidence 4788888766668899999999999865432 2222222111 12346788899999999999998
Q ss_pred CccEEEEEeeeeccCCCccCceeeEecc-chhHHHHHH
Q 015960 248 SGSLIGVNTSIITRTDAFCGMACSIPID-TVSGIVDQL 284 (397)
Q Consensus 248 ~G~vVGI~s~~~~~~~~~~~~~~aip~~-~i~~~~~~l 284 (397)
+|+||||++++....+...+.+|++|++ .+++++++.
T Consensus 203 ~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 203 NGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp TSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred CCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 9999999999876543345689999996 777777653
No 19
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.86 E-value=2.9e-21 Score=172.95 Aligned_cols=158 Identities=22% Similarity=0.272 Sum_probs=122.7
Q ss_pred eeEEEEEcC--CCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCeEEEEEcCCCCCcce-------eecCCCC
Q 015960 115 TGTGFIWDE--DGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD-QGTDLAVLHIDAPNHKLRS-------IPVGVSA 184 (397)
Q Consensus 115 ~GSG~ii~~--~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlL~v~~~~~~~~~-------~~l~~s~ 184 (397)
..+||++++ +++||||+||+.+...+. .+ ..+.++++..+ +..|+||||++.+....+. +++..+.
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~~-~~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~ 92 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVNATAR---IG-GAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGST 92 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEE---ET-TEEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCC
T ss_pred CCcCEEEecCCeeEEEECcccCCCCCEEE---eC-CcEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCcc
Confidence 458999965 368999999999887775 45 47889999999 9999999999875312222 2345567
Q ss_pred CCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeee-ccC-
Q 015960 185 NLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSII-TRT- 262 (397)
Q Consensus 185 ~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~-~~~- 262 (397)
.+++|++|..+|+|.+ .+.|+|+.+++......+ .+.+++++++.+++|||||||+|.+|++|||+++.. ...
T Consensus 93 ~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~~~g-~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~~ 167 (198)
T 2h5c_A 93 EAAVGAAVCRSGRTTG----YQCGTITAKNVTANYAEG-AVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNG 167 (198)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTTS
T ss_pred cCCCCCeEEEeecCcc----eEEEEEEeeeeEEEeCCC-eEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccCC
Confidence 7999999999999865 689999998875543222 245689999999999999999999999999999983 221
Q ss_pred C-----CccCceeeEeccchhHHH
Q 015960 263 D-----AFCGMACSIPIDTVSGIV 281 (397)
Q Consensus 263 ~-----~~~~~~~aip~~~i~~~~ 281 (397)
+ ...+++|++|++.+++.+
T Consensus 168 ~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 168 NNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp BSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CccccccCCceEEEEEHHHHHHHC
Confidence 1 245799999998776543
No 20
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.86 E-value=8.8e-22 Score=176.67 Aligned_cols=155 Identities=21% Similarity=0.333 Sum_probs=111.6
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCe----EEEEe----cCCcEEEE-EEEEEcCCCCeEEEEEcCCC-------CCcce
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASS----VKVTL----FDKTTLDA-KVVGHDQGTDLAVLHIDAPN-------HKLRS 177 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~----i~V~~----~~g~~~~a-~vv~~d~~~DlAlL~v~~~~-------~~~~~ 177 (397)
..|+||+|++ +||||||||+.+... +.+.+ .+++.+++ +++.+++..||||||++.+. ..+++
T Consensus 22 ~~c~G~lI~~-~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~v~p 100 (200)
T 2w7s_A 22 VGGTGVVVGK-NTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSY 100 (200)
T ss_dssp TTEEEEEEET-TEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGGSCCC
T ss_pred ceEEEEEEEC-CEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccccccc
Confidence 4799999996 599999999975433 55543 45677877 57788889999999998741 14667
Q ss_pred eecCCCCCCCCCCeEEEEecCCCCCC----ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEE
Q 015960 178 IPVGVSANLRIGQKVYAIGHPLGRKF----TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIG 253 (397)
Q Consensus 178 ~~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVG 253 (397)
++|. ..+..|+.++++|||.+... .++.|+++... ...+++++.+|+|+|||||+|.+|+|||
T Consensus 101 i~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~-----------~~~~~~~~~~~~GdSGGPl~~~~g~lvG 167 (200)
T 2w7s_A 101 TKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS-----------GTFMEFDAYAQPGNSGSPVLNSKHELIG 167 (200)
T ss_dssp CCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE-----------TTEEEECSCCCTTCTTCEEECTTSCEEE
T ss_pred eecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC-----------CCEEEEcceeCCCCccCeEECcCCEEEE
Confidence 7774 45788999999999976432 23567766531 2357889999999999999998999999
Q ss_pred EEeeeeccCCCccCceeeE-eccchhHHHHHH
Q 015960 254 VNTSIITRTDAFCGMACSI-PIDTVSGIVDQL 284 (397)
Q Consensus 254 I~s~~~~~~~~~~~~~~ai-p~~~i~~~~~~l 284 (397)
|++++.... ....+|++ +...+++|+++.
T Consensus 168 I~s~g~~~~--~~~~~~~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 168 ILYAGSGKD--ESEKNFGVYFTPQLKEFIQNN 197 (200)
T ss_dssp EEEEEC------CCCEEEEECCHHHHHHHHHT
T ss_pred EEeccccCC--CCccceeeecHHHHHHHHHhh
Confidence 999986432 12245556 335566666653
No 21
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.84 E-value=5e-20 Score=173.48 Aligned_cols=172 Identities=18% Similarity=0.260 Sum_probs=122.6
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCe----EEEEe--------cCCcEEEEEEEEEc
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASS----VKVTL--------FDKTTLDAKVVGHD 158 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~----i~V~~--------~~g~~~~a~vv~~d 158 (397)
-+++|+|..... .....|+||+|+++ ||||||||+.+... +.|++ .+++...++++..+
T Consensus 19 ~~~~v~i~~~~~--------~~~~~C~G~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~ 89 (274)
T 2o8l_A 19 YAPVTYIQVEAP--------TGTFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYS 89 (274)
T ss_dssp GTTEEEEEEEET--------TEEEEEEEEEEETT-EEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECS
T ss_pred cceEEEEEEEcC--------CCCEEEEEEEEECC-EEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCC
Confidence 356677754221 12357999999976 99999999976543 77754 23455556677777
Q ss_pred CCCCeEEEEEcCCC------CCcceeecCCCCCCCCCCeEEEEecCCCCCC---ceeeeEEeeccccccCCCCCCcccEE
Q 015960 159 QGTDLAVLHIDAPN------HKLRSIPVGVSANLRIGQKVYAIGHPLGRKF---TCTAGIISAFGLEPITATGPPIQGLI 229 (397)
Q Consensus 159 ~~~DlAlL~v~~~~------~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~---~~~~G~vs~~~~~~~~~~~~~~~~~i 229 (397)
..+||||||++.+. ..++++.|..+..+..|+.++++|||.+... ....|.++... ...+
T Consensus 90 ~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~-----------~~~i 158 (274)
T 2o8l_A 90 GEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK-----------GEAM 158 (274)
T ss_dssp SSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE-----------TTEE
T ss_pred CCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC-----------CCeE
Confidence 88999999998752 3578888876566789999999999976432 22445554321 2357
Q ss_pred EEccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 230 QIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 230 ~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
++++.+|+|+|||||++.+|+||||++++.... .+.++.+. ..++.|+++.++
T Consensus 159 ~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~---~~~~~~~~-~~~~~wI~~~i~ 211 (274)
T 2o8l_A 159 QYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNE---FNGAVFIN-ENVRNFLKQNIE 211 (274)
T ss_dssp EESCCCCTTCTTCEEECTTSCEEEEEEEEETTT---EEEEEECC-HHHHHHHHHHCT
T ss_pred EeCcccCCCCchhheeccCCeEEEEEeCcccCC---CCceEEec-HHHHHHHHHHHh
Confidence 889999999999999998999999999986432 12455553 556777776554
No 22
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.84 E-value=2.3e-21 Score=162.92 Aligned_cols=116 Identities=28% Similarity=0.401 Sum_probs=103.5
Q ss_pred cCceeeEeccchhHHHHHHHhccccccccCCCchh------HHHHHHcCC-----CCcEEEEecccCcccccCccccccC
Q 015960 266 CGMACSIPIDTVSGIVDQLVKFGKIIRPYLGIAHD------QLLEKLMGI-----SGGVIFIAVEEGPAGKAGLRSTKFG 334 (397)
Q Consensus 266 ~~~~~aip~~~i~~~~~~l~~~g~~~~~~lGi~~~------~~~~~~~~~-----~g~~V~~v~~~spa~~aGl~~~~~~ 334 (397)
+|+|||||++.+++++++|+++|++.|+|||+... ....+.+++ .|++|..|.++|||+ +||++
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~---- 76 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEK---- 76 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCS----
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCC----
Confidence 57999999999999999999999999999999432 134444554 589999999999999 99999
Q ss_pred CCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeeCC
Q 015960 335 ANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEP 393 (397)
Q Consensus 335 ~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 393 (397)
||+|++|||+++.++.++..++...++|++++++|+|+|+.+++++++.+.|
T Consensus 77 -------GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 77 -------YDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp -------SCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEEECCCC-
T ss_pred -------CCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEcccC
Confidence 9999999999999999999999887789999999999999999999988776
No 23
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.83 E-value=5.7e-20 Score=165.03 Aligned_cols=157 Identities=18% Similarity=0.306 Sum_probs=110.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCC---eEEEEe----cCCcEEE-EEEEEEcCCCCeEEEEEcCCC-----------CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGAS---SVKVTL----FDKTTLD-AKVVGHDQGTDLAVLHIDAPN-----------HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~---~i~V~~----~~g~~~~-a~vv~~d~~~DlAlL~v~~~~-----------~~ 174 (397)
+.|+||+|+++ ||||||||+.+.. .+.+.. .++..++ .+++.+++.+||||||++.+. ..
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~ 100 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDN 100 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEEEHHHH
T ss_pred eeEEEEEEECC-EEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccccccccccccccc
Confidence 47999999986 9999999998654 455432 3456666 567777788999999998631 12
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCCC----ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCcc
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRKF----TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGS 250 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~ 250 (397)
++++.+.. .+..|+.++++|||.+... ....|.++... ...++.++..|+|+|||||++.+|+
T Consensus 101 v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~-----------~~~~~~~~~~~~GdSGGPl~~~~g~ 167 (204)
T 2vid_A 101 VTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE-----------GSSIVYSAHTESGNSGSPVLNSNNE 167 (204)
T ss_dssp CCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE-----------TTEEEECCCCCGGGTTCEEECTTSC
T ss_pred ccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc-----------CCeEEEecccCCCCccCcEECCCCe
Confidence 46666643 5789999999999986443 23456665431 2357788899999999999999999
Q ss_pred EEEEEeeeeccCCCccCceeeE-eccchhHHHHHHH
Q 015960 251 LIGVNTSIITRTDAFCGMACSI-PIDTVSGIVDQLV 285 (397)
Q Consensus 251 vVGI~s~~~~~~~~~~~~~~ai-p~~~i~~~~~~l~ 285 (397)
||||++++.... .....+|++ +...+++|+++.+
T Consensus 168 lvGI~s~g~~~~-~~~~~~~~~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 168 LVGIHFASDVKN-DDNRNAYGVYFTPEIKKFIAENI 202 (204)
T ss_dssp EEEEEEEECC----CCCCEEEECCCHHHHHHHHHHS
T ss_pred EEEEEecCccCC-CcccccceeEeCHHHHHHHHhhc
Confidence 999999986321 122345544 3355677776643
No 24
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.83 E-value=1e-19 Score=170.86 Aligned_cols=157 Identities=18% Similarity=0.308 Sum_probs=115.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCC----eEEEEec--------CCcEEEEEEEEEcCCCCeEEEEEcCCC------CCc
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGAS----SVKVTLF--------DKTTLDAKVVGHDQGTDLAVLHIDAPN------HKL 175 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~----~i~V~~~--------~g~~~~a~vv~~d~~~DlAlL~v~~~~------~~~ 175 (397)
..|+||+|+++ ||||||||+.+.. .+.|++. +++...++++..+..+||||||++.+. ..+
T Consensus 34 ~~CgG~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (268)
T 1wcz_A 34 FIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (268)
T ss_dssp EEEEEEECSSS-EEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHHS
T ss_pred EEEEEEEEECC-EEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCccccccccccc
Confidence 58999999976 9999999997543 3777642 344555667777788999999999753 246
Q ss_pred ceeecCCCCCCCCCCeEEEEecCCCCCC---ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEE
Q 015960 176 RSIPVGVSANLRIGQKVYAIGHPLGRKF---TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLI 252 (397)
Q Consensus 176 ~~~~l~~s~~~~~G~~V~~iG~p~g~~~---~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vV 252 (397)
.++.|..+..+..|+.++++|||.+... ....|.++... ...+++++.+|+|+|||||++.+|+||
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~-----------~~~i~~~~~~c~GdSGGPLv~~~g~lv 181 (268)
T 1wcz_A 113 KPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK-----------GEAMQYDLSTTGGNSGSPVFNEKNEVI 181 (268)
T ss_dssp CCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE-----------TTEEEESBCCCTTCTTCEEECTTSCEE
T ss_pred ceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC-----------CCeEEEecccCCCCccCeEEccCCEEE
Confidence 7888876556789999999999976432 22445554321 235788999999999999999899999
Q ss_pred EEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 253 GVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 253 GI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||++++.... .+.++++. ..++.|+++.++
T Consensus 182 GIvS~G~~~~---~~~~~~~~-~~~~~wI~~~i~ 211 (268)
T 1wcz_A 182 GIHWGGVPNE---FNGAVFIN-ENVRNFLKQNIE 211 (268)
T ss_dssp EEEEEEETTT---EEEEEECC-HHHHHHHHHHCT
T ss_pred EEEeCCccCC---cceeEEcC-HHHHHHHHHHHH
Confidence 9999986432 22455554 556777776654
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.82 E-value=1.2e-20 Score=174.83 Aligned_cols=144 Identities=22% Similarity=0.316 Sum_probs=105.6
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCe----EEEEecC------------CcEEEEEEEEEcC---CCCeEEEEEcCCC-
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASS----VKVTLFD------------KTTLDAKVVGHDQ---GTDLAVLHIDAPN- 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~----i~V~~~~------------g~~~~a~vv~~d~---~~DlAlL~v~~~~- 172 (397)
...|+||+|+++ ||||||||+.+... +.+.... ...+.++.+..++ .+|||||+++.+.
T Consensus 47 ~~~c~G~lI~~~-~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~ 125 (246)
T 1qtf_A 47 STLATGVLIGKN-TIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEK 125 (246)
T ss_dssp TEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTT
T ss_pred CceEEEEEEECC-EEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCcc
Confidence 458999999975 99999999976543 5554421 1368888888888 8999999998863
Q ss_pred -----CCcceeecCCCCCCCCCCeEEEEecCCCCCCce-eeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceec
Q 015960 173 -----HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTC-TAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLD 246 (397)
Q Consensus 173 -----~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~-~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn 246 (397)
..+++++|..+..+..|+.++++|||.+..... ....+... ..+++++.+|+|+|||||+|
T Consensus 126 ~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~-------------~~~~~~~~~~~GdSGGPlv~ 192 (246)
T 1qtf_A 126 GESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMF-------------NDSQYFGYTEVGNSGSGIFN 192 (246)
T ss_dssp SCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEES-------------SSSBEESCCCGGGTTCEEEC
T ss_pred ccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeec-------------CcEEEeCCCCCCCchhheEC
Confidence 137888887666678999999999998754321 11111100 01234677899999999999
Q ss_pred CCccEEEEEeeeeccCCCccCceeeEeccchh
Q 015960 247 SSGSLIGVNTSIITRTDAFCGMACSIPIDTVS 278 (397)
Q Consensus 247 ~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~ 278 (397)
.+|+||||++++.. +|++|++.+.
T Consensus 193 ~~g~lvGI~s~g~~--------~~~ipi~~~~ 216 (246)
T 1qtf_A 193 LKGELIGIHSGKGG--------QHNLPIGVFF 216 (246)
T ss_dssp TTCCEEEEEEEEET--------TTTEEEEEET
T ss_pred CCCEEEEEEecccc--------Cccccchhhh
Confidence 99999999998752 4678876553
No 26
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.81 E-value=2.5e-19 Score=159.06 Aligned_cols=155 Identities=19% Similarity=0.198 Sum_probs=118.0
Q ss_pred ceeEEEEEc-CCC--EEEEcccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCeEEEEEcCCCCCcce---------eec
Q 015960 114 ATGTGFIWD-EDG--HIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD-QGTDLAVLHIDAPNHKLRS---------IPV 180 (397)
Q Consensus 114 ~~GSG~ii~-~~G--~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlL~v~~~~~~~~~---------~~l 180 (397)
.-.+||++. ++| |||||+||+.+...+ .+.| +.+++++.| +..|+||||++.+....+. +++
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVGTQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTTCEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCCCEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 356899995 488 999999999766554 3455 889999999 9999999999875311222 346
Q ss_pred CCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeec
Q 015960 181 GVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 181 ~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~ 260 (397)
..+..+++|++|..+|+|.+ .+.|+|+.+++......+ .+.++++++..+.+|||||||+ .+|+++||+++...
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~~~~-~~~~~~~~~~~~~~GDSGgpl~-~~~~~vGi~s~~~~ 162 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSYPQG-TVHSLTRTSVCAEPGDSGGSFI-SGTQAQGVTSGGSG 162 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEESCCCCTTCTTCEEE-ETTEEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEeCCC-cEeeeEeeeeecCCCCccceEE-ECCEEEEEEeccCC
Confidence 66677899999999999975 578999988876532221 2346788888888999999999 48899999999764
Q ss_pred cCCCccCceeeEeccchhHH
Q 015960 261 RTDAFCGMACSIPIDTVSGI 280 (397)
Q Consensus 261 ~~~~~~~~~~aip~~~i~~~ 280 (397)
.+. ..+.+|++|++.+.+.
T Consensus 163 ~~~-~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 163 NCR-TGGTTFYQEVNPMLNS 181 (188)
T ss_dssp ETT-TEEEEEEEESHHHHHH
T ss_pred CCC-CCCceEEEEHHHHHHH
Confidence 332 3457999998776543
No 27
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.81 E-value=1.6e-19 Score=160.14 Aligned_cols=162 Identities=19% Similarity=0.289 Sum_probs=116.0
Q ss_pred ceeE-EEEEcC--CCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCeEEEEEcC-C---CCCcceeecCCCCC
Q 015960 114 ATGT-GFIWDE--DGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD-QGTDLAVLHIDA-P---NHKLRSIPVGVSAN 185 (397)
Q Consensus 114 ~~GS-G~ii~~--~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlL~v~~-~---~~~~~~~~l~~s~~ 185 (397)
..|| ||++.. ++|||||+||+.+...+.+...+...+ +++.+.+ +.+||||||++. + ...++++++..+..
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~~~~~~-g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~~ 90 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSARTTVL-GTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAAN 90 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESSTTSCSEE-EEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecCCCceEe-EEEeccccCCCCEEEEEecCCCccccCccceeeeCCccc
Confidence 4676 999964 469999999999988877765444443 5556666 889999999987 3 12345667754456
Q ss_pred CCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCc
Q 015960 186 LRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAF 265 (397)
Q Consensus 186 ~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~ 265 (397)
+..|+.++++||+.+ .+.+.+..............+...++.+..+|+|||||||++.+ +++||++++..... .
T Consensus 91 ~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~~~~~-~ 164 (185)
T 2qa9_E 91 ATVGMAVTRRGSTTG----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTSGGSGNCS-S 164 (185)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEETT-T
T ss_pred CCCCCEEEEecCCCc----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEECC-EEEEEEEecCCCCC-C
Confidence 789999999999753 45677766554322111111234567777789999999999865 99999999864332 3
Q ss_pred cCceeeEeccchhHHHH
Q 015960 266 CGMACSIPIDTVSGIVD 282 (397)
Q Consensus 266 ~~~~~aip~~~i~~~~~ 282 (397)
...+++.|++.++++++
T Consensus 165 ~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 165 GGTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEEEEEHHHHHHHHT
T ss_pred CCcEEEEEHHHHHHhhC
Confidence 45789999988888764
No 28
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.80 E-value=3e-19 Score=158.62 Aligned_cols=158 Identities=16% Similarity=0.237 Sum_probs=116.4
Q ss_pred ee-EEEEEcCC--CEEEEcccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCeEEEEEcCCCCCccee--------ecCC
Q 015960 115 TG-TGFIWDED--GHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD-QGTDLAVLHIDAPNHKLRSI--------PVGV 182 (397)
Q Consensus 115 ~G-SG~ii~~~--G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlL~v~~~~~~~~~~--------~l~~ 182 (397)
.| +||+++++ +|||||+||+.+...+. ..++....+++...+ +..|+||||++.+....+.+ ++..
T Consensus 13 ~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~~~i~~ 90 (187)
T 1hpg_A 13 RCSAAFNVTKGGARYFVTAGHCTNISANWS--ASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGSTQDISS 90 (187)
T ss_dssp EEECCEEEEETTEEEEEECHHHHTTCSEEE--SSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECSSSCEEECCE
T ss_pred cCcceEEEEECCeeEEEECcccCCCCCeEE--eCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEecCCceeeecc
Confidence 45 59999865 49999999999887654 456554446666555 78899999998742222333 3344
Q ss_pred CCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccC
Q 015960 183 SANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRT 262 (397)
Q Consensus 183 s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~ 262 (397)
+..+++|+.|.++|+|.+ .+.|+|+.+++......+ ...+++++++.+++|||||||++. ++++||+++....+
T Consensus 91 ~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~~~~-~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~~~ 164 (187)
T 1hpg_A 91 AANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNYGDG-PVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSGCS 164 (187)
T ss_dssp ECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESCCB
T ss_pred ccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEeCCC-eEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCCCC
Confidence 567899999999999964 688999988875533211 245689999999999999999986 59999999875432
Q ss_pred CCccCceeeEeccchhHHH
Q 015960 263 DAFCGMACSIPIDTVSGIV 281 (397)
Q Consensus 263 ~~~~~~~~aip~~~i~~~~ 281 (397)
. ..+.+|++|++.+++.+
T Consensus 165 ~-~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 165 G-TAGSAIHQPVTEALSAY 182 (187)
T ss_dssp T-TBCCCEEEEHHHHHHHH
T ss_pred C-CCCceEEEEHHHHHHHc
Confidence 2 34689999998776543
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.77 E-value=2.4e-18 Score=152.79 Aligned_cols=150 Identities=21% Similarity=0.312 Sum_probs=112.7
Q ss_pred eeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCeEEEEEcCCCCCcc--------eeecCCCCC
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD-QGTDLAVLHIDAPNHKLR--------SIPVGVSAN 185 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlL~v~~~~~~~~--------~~~l~~s~~ 185 (397)
--+||++++ +||||+||+++...+ +..| +++++.| +..|+||||++.+....+ ++++..+..
T Consensus 17 CT~Gf~~~~--~ilTa~Hc~~~~~~v--~~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~ 87 (189)
T 2ea3_A 17 CSIGFAVNG--GFITAGHCGRTGATT--ANPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTA 87 (189)
T ss_dssp EECCEEETT--EEEECGGGCCTTCEE--ETTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCC
T ss_pred CccCEEccC--eEEEchhcCCCCCEE--EeCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcC
Confidence 347899964 999999999887764 3444 7788888 899999999987531122 335666677
Q ss_pred CCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCc
Q 015960 186 LRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAF 265 (397)
Q Consensus 186 ~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~ 265 (397)
+++|+.|..+|+|.+ .+.|+|+.+++......+ .+.++++++..+.+|||||||++ +|+++||+++....+. .
T Consensus 88 ~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~~~~-~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~-~ 160 (189)
T 2ea3_A 88 APVGSAVCRSGSTTG----WHCGTITALNSSVTYPEG-TVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCR-T 160 (189)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETT-T
T ss_pred CCCCCEEEEEEeCCc----cEEEEEEecceEEEeCCc-cCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCC-C
Confidence 899999999999865 578899888775432211 13457888888899999999996 8899999998764332 3
Q ss_pred cCceeeEeccchhHH
Q 015960 266 CGMACSIPIDTVSGI 280 (397)
Q Consensus 266 ~~~~~aip~~~i~~~ 280 (397)
.+.+|++|++.+++.
T Consensus 161 ~~~~~~~pi~~~l~~ 175 (189)
T 2ea3_A 161 GGTTFFQPVNPILQA 175 (189)
T ss_dssp EEEEEEEEHHHHHHH
T ss_pred CCcEEEEEHHHHHHH
Confidence 468999998766544
No 30
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.76 E-value=2.1e-18 Score=152.68 Aligned_cols=150 Identities=23% Similarity=0.306 Sum_probs=112.6
Q ss_pred EEEEEcC--CCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEc-CCCCeEEEEEcCCCCCcc--------eeecCCCCC
Q 015960 117 TGFIWDE--DGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHD-QGTDLAVLHIDAPNHKLR--------SIPVGVSAN 185 (397)
Q Consensus 117 SG~ii~~--~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d-~~~DlAlL~v~~~~~~~~--------~~~l~~s~~ 185 (397)
+||++.+ +++||||+||+++...+.+ +.+++++.+ +..|+||||++.+....+ ++++..+..
T Consensus 18 ~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~~~~~ 90 (186)
T 2pfe_A 18 IGFSVRQGSQTGFATAGHCGSTGTRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVTGSQE 90 (186)
T ss_dssp CCEEEEETTEEEEEECGGGCCTTCEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECCBCCC
T ss_pred eeEEEEcCCeeEEEEChhhCCCCCEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecCCCCC
Confidence 7999964 4699999999998777664 567888887 899999999987531122 234555677
Q ss_pred CCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCc
Q 015960 186 LRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAF 265 (397)
Q Consensus 186 ~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~ 265 (397)
+++|++|..+|++.+ .+.|+|+.+++......+ .+.+.++++..+.+|||||||+. +|+++||+++....+. .
T Consensus 91 ~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~~~-~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~c~-~ 163 (186)
T 2pfe_A 91 AATGSSVCRSGATTG----WRCGTIQSKNQTVRYAEG-TVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGDCR-S 163 (186)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEETTE-EEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETT-T
T ss_pred CCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeCCc-eEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCCCCC-C
Confidence 899999999999865 678999888776432222 23456788877889999999995 8899999999764332 3
Q ss_pred cCceeeEeccchhHH
Q 015960 266 CGMACSIPIDTVSGI 280 (397)
Q Consensus 266 ~~~~~aip~~~i~~~ 280 (397)
.+.+|++|++.+.+.
T Consensus 164 ~~~~~~~pi~~~l~~ 178 (186)
T 2pfe_A 164 GGITFFQPINPLLSY 178 (186)
T ss_dssp EEEEEEEEHHHHHHH
T ss_pred CCcEEEEEHHHHHHH
Confidence 457999998766544
No 31
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.73 E-value=4.5e-18 Score=150.17 Aligned_cols=154 Identities=18% Similarity=0.247 Sum_probs=104.4
Q ss_pred ceeE-EEEEcC--CCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCC---CCccee-----ecCC
Q 015960 114 ATGT-GFIWDE--DGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN---HKLRSI-----PVGV 182 (397)
Q Consensus 114 ~~GS-G~ii~~--~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~---~~~~~~-----~l~~ 182 (397)
..|| ||+|++ ++|||||+||+.+...+.+-..++ ...+.+|+||||++.+. ..+.++ .+..
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~~~--------~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~~ 83 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTRTG--------TSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDITT 83 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEETTEEEEE--------EECSBSCEEEEEESCGGGCCCEEECSSSCEEECCE
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCceeecceeC--------CcCCCCCEEEEEccCCCcccceEEecCCcceeecc
Confidence 4677 999974 359999999998766543222221 23367899999998742 122222 2223
Q ss_pred CCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccC
Q 015960 183 SANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRT 262 (397)
Q Consensus 183 s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~ 262 (397)
+..+..|+.|.++|++.+ .+.|.+....+......+..+.+.++++..+++|||||||++.+ +++||++++...+
T Consensus 84 ~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~~~ 158 (181)
T 2sga_A 84 AGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSGNC 158 (181)
T ss_dssp ECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEET
T ss_pred cccCCCCCEEEEeecCCC----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCCCC
Confidence 456889999999998854 45677766654432111111344677888889999999999865 9999999986543
Q ss_pred CCccCceeeEeccchhHHH
Q 015960 263 DAFCGMACSIPIDTVSGIV 281 (397)
Q Consensus 263 ~~~~~~~~aip~~~i~~~~ 281 (397)
. ..+.+++.|++.+++++
T Consensus 159 ~-~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 159 R-TGGTTFYQPVTEALSAY 176 (181)
T ss_dssp T-TEEEEEEEEHHHHHHHH
T ss_pred c-CCCceEEEEHHHHHHhc
Confidence 3 24579999998877665
No 32
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.72 E-value=1.1e-17 Score=143.54 Aligned_cols=126 Identities=15% Similarity=0.246 Sum_probs=98.4
Q ss_pred cCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEE-
Q 015960 90 NLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHI- 168 (397)
Q Consensus 90 ~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v- 168 (397)
+...||.|.. ...+.||||+|+.+|++|||+||+.+....+|++ +|+.++ +.+++..|+|++++
T Consensus 2 ~~~n~~~v~g-----------~~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~-~G~~~~---Vgf~~~~DlA~l~v~ 66 (198)
T 1mbm_A 2 ARGNVGFVAG-----------SSYGTGSVWTRNNEVVVLTASHVVGRANMATLKI-GDAMLT---LTFKKNGDFAEAVTT 66 (198)
T ss_dssp CCTTEEEEES-----------SSEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE-TTEEEE---EECEEETTEEEEEEC
T ss_pred cccceEEEec-----------ccCCccceEEECCCeEEEEeeeEEccCceEEEEE-CCEEEE---eecccCCcEEEEEee
Confidence 3455777764 2457899999999999999999999999999999 998887 77789999999999
Q ss_pred --cCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceec
Q 015960 169 --DAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLD 246 (397)
Q Consensus 169 --~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn 246 (397)
+.+ ..++++++.. +++|+--+ ..+.|.+..+.- . ...++++ +|||||||++|
T Consensus 67 ~~~~~-g~~P~l~las---p~vG~a~~----------~~~tG~~~~l~g-------~--~g~l~~t---~PGDSGsPVl~ 120 (198)
T 1mbm_A 67 QSELP-GNWPQLHFAQ---PTTGPASW----------CTATGDEEGLLS-------G--EVCLAWT---TSGDSGSAVVQ 120 (198)
T ss_dssp TTTSC-SCCCBCCBCC---CCSEEEEE----------EETTEEEEEEEC-------S--SCEECCC---CGGGTTCEEEE
T ss_pred ccCCC-CCCcccccCC---CcccceEE----------eeccccEEEEec-------C--CceeEcC---CCCCCCCcccc
Confidence 554 3667888843 68888222 245566666541 1 3456666 78999999999
Q ss_pred CCccEEEEEee
Q 015960 247 SSGSLIGVNTS 257 (397)
Q Consensus 247 ~~G~vVGI~s~ 257 (397)
.+ +||||++.
T Consensus 121 ~~-~vIGV~T~ 130 (198)
T 1mbm_A 121 GD-AVVGVHTG 130 (198)
T ss_dssp TT-EEEEEEEE
T ss_pred CC-eEEEEEec
Confidence 99 99999998
No 33
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.61 E-value=1.2e-15 Score=133.04 Aligned_cols=131 Identities=20% Similarity=0.236 Sum_probs=86.1
Q ss_pred HcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEE
Q 015960 89 ENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHI 168 (397)
Q Consensus 89 ~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v 168 (397)
+..+-+|.|.. ...+.|+||.++.+++||||+|||.+.+. .+. .++..+. +.+++..|+|++++
T Consensus 16 ~~~~N~v~V~G-----------~~~GsGt~F~i~g~~~VvTA~HVVg~~~~-vVt-~~g~r~~---~~f~~~~D~All~i 79 (213)
T 3fan_A 16 KPSLNTVNVVG-----------SSMGSGGVFTIDGKIKCVTAAHVLTGNSA-RVS-GVGFNQM---LDFDVKGDFAIADC 79 (213)
T ss_dssp SCCTTEEEEES-----------SSEEEEEEEEETTEEEEEEEGGGSBTTEE-EEE-ETTEEEE---EECEEETTEEEEEC
T ss_pred CCCCCeEEEee-----------cCCCceEEEEECCcEEEEEeccEeCCCCE-EEe-cCCcEEE---EEecCCCcEEEEEc
Confidence 44556677754 24578999999877899999999999888 444 5666654 36799999999999
Q ss_pred cCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCC
Q 015960 169 DAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSS 248 (397)
Q Consensus 169 ~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~ 248 (397)
......+|.++++.+. ..|...+..-+ ....|.+.. ...+.+ .++|||||||+|.+
T Consensus 80 ~~~~g~~P~lKlA~~~--~~G~a~~~~~~------gv~~G~i~~-------------~~al~~---T~pGdSGsPVvn~d 135 (213)
T 3fan_A 80 PNWQGVAPKAQFCEDG--WTGRAYWLTSS------GVEPGVIGN-------------GFAFCF---TACGDSGSPVITEA 135 (213)
T ss_dssp TTCCSCCCBCCBCCTT--CCEEEEEEETT------EEEEEEEET-------------TEEEES---SCCCSTTCEEEETT
T ss_pred cCcCCCCCcceeeeee--ccCceEEEEcc------Ccccccccc-------------CCEEEe---cCCCCCCCccCCCC
Confidence 6533478888886322 22222222111 122233311 011222 26899999999999
Q ss_pred ccEEEEEeeee
Q 015960 249 GSLIGVNTSII 259 (397)
Q Consensus 249 G~vVGI~s~~~ 259 (397)
|+||||++..-
T Consensus 136 G~VIGVHt~s~ 146 (213)
T 3fan_A 136 GELVGVHTGSN 146 (213)
T ss_dssp SCEEEEEEC--
T ss_pred CcEEEEEeccC
Confidence 99999998764
No 34
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.58 E-value=7e-14 Score=127.19 Aligned_cols=169 Identities=15% Similarity=0.179 Sum_probs=109.8
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC--CeEEEEec------CCcEEEEEEEEEcCC-----CCeEEEEEcCCC---CCcce
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA--SSVKVTLF------DKTTLDAKVVGHDQG-----TDLAVLHIDAPN---HKLRS 177 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~--~~i~V~~~------~g~~~~a~vv~~d~~-----~DlAlL~v~~~~---~~~~~ 177 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|++. +++.+..+-+..++. +|||||+++.+- ..+.+
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~p 102 (224)
T 1pq7_A 24 PWCGGSLLNAN-TVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGY 102 (224)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBCC
T ss_pred eEEEEEEecCC-EEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCcccc
Confidence 47999999987 999999999753 45777763 244566665666664 599999999862 24677
Q ss_pred eecCC-CCCCCCCCeEEEEecCCCCC------CceeeeEEeecc---ccccCCCCCCcccEEEE-----ccccCCCCccc
Q 015960 178 IPVGV-SANLRIGQKVYAIGHPLGRK------FTCTAGIISAFG---LEPITATGPPIQGLIQI-----DAAINRGNSGG 242 (397)
Q Consensus 178 ~~l~~-s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~-----~~~i~~G~SGG 242 (397)
+.|.. ...+..|+.+++.||+.... .......+.-+. +.............+.. ....|.|||||
T Consensus 103 icL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 182 (224)
T 1pq7_A 103 ARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGG 182 (224)
T ss_dssp CCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTC
T ss_pred eecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCc
Confidence 77763 23467899999999975321 112222222221 11111001111234443 24578999999
Q ss_pred ceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHH
Q 015960 243 PLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQL 284 (397)
Q Consensus 243 Plvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l 284 (397)
||+..+|.++||++++.. ++.....+....+...++|+++.
T Consensus 183 PL~~~~g~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~ 223 (224)
T 1pq7_A 183 PIVDSSNTLIGAVSWGNG-CARPNYSGVYASVGALRSFIDTY 223 (224)
T ss_dssp EEECTTCCEEEEEEECSS-SSCTTCCEEEEETTTSHHHHHHH
T ss_pred ceECcCCeEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHhh
Confidence 999878999999999853 22223356677888888888763
No 35
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.56 E-value=5.2e-13 Score=122.39 Aligned_cols=170 Identities=14% Similarity=0.153 Sum_probs=107.8
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEec-------CCcEEEEEEEEEcC------------------CCCeEEEE
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLF-------DKTTLDAKVVGHDQ------------------GTDLAVLH 167 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~-------~g~~~~a~vv~~d~------------------~~DlAlL~ 167 (397)
...|+|.+|+++ ||||||||+.+...+.+-.. .++.+..+-+..++ .+|||||+
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (237)
T 2zch_P 23 RAVCGGVLVHPQ-WVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLR 101 (237)
T ss_dssp SEEEEEEEEETT-EEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEE
T ss_pred CeEEEEEEecCC-EEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEEEE
Confidence 357999999987 99999999987544333221 13445544444443 56999999
Q ss_pred EcCCC---CCcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCCCCcccEEEE----
Q 015960 168 IDAPN---HKLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATGPPIQGLIQI---- 231 (397)
Q Consensus 168 v~~~~---~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~---- 231 (397)
++.+- ..+.++.|.. ..+..|+.+++.||..... .......+.-+.... ... .......+..
T Consensus 102 L~~~~~~~~~v~pi~Lp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~ 179 (237)
T 2zch_P 102 LSEPAELTDAVKVMDLPT-QEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHP-QKVTKFMLCAGRWT 179 (237)
T ss_dssp ESSCCCCCSSCCCCCCCS-SCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCS-SBCCTTEEEEECTT
T ss_pred eCCCCccCCcEeeeECCC-CCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhccccc-CCCCceEEeecCCC
Confidence 99862 3567778765 3467899999999985321 112222222221111 110 0001223433
Q ss_pred -ccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 -DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 -~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+. ++.++||++++...+......+....+...++|+++.++
T Consensus 180 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 234 (237)
T 2zch_P 180 GGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV 234 (237)
T ss_dssp CSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 245799999999995 689999999986433323345667888888999988765
No 36
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.55 E-value=7.1e-13 Score=120.14 Aligned_cols=164 Identities=15% Similarity=0.154 Sum_probs=104.5
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCC--eEEEEecC---------CcEEEEEEEEEc------CCCCeEEEEEcCCC---
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGAS--SVKVTLFD---------KTTLDAKVVGHD------QGTDLAVLHIDAPN--- 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~--~i~V~~~~---------g~~~~a~vv~~d------~~~DlAlL~v~~~~--- 172 (397)
...|+|.+|+++ ||||+|||+.+.. .+.|.+.. .+.+..+-+..+ ..+|||||+++.+-
T Consensus 26 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~ 104 (221)
T 1fuj_A 26 SHFCGGTLIHPS-FVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLS 104 (221)
T ss_dssp CCCEEEEEEETT-EEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccC
Confidence 357999999987 9999999998643 56777642 233444333332 35699999999862
Q ss_pred CCcceeecCCCC-CCCCCCeEEEEecCCCCCC-----ceeeeEEeeccccccCCCCCCcccEEEE-----ccccCCCCcc
Q 015960 173 HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRKF-----TCTAGIISAFGLEPITATGPPIQGLIQI-----DAAINRGNSG 241 (397)
Q Consensus 173 ~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~~-----~~~~G~vs~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SG 241 (397)
..+.++.|.... .+..|+.+++.||+..... ......+.-. ..... ...+.. ....|.||||
T Consensus 105 ~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~------~~~~Ca~~~~~~~~~C~GDSG 177 (221)
T 1fuj_A 105 ASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCR------PHNICTFVPRRKAGICFGDSG 177 (221)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCC------TTEEEEECSSSSCBCCTTCTT
T ss_pred CcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecC------CceeeeccCCCCCCCCCCCCC
Confidence 356777776543 2468999999999753211 1222222211 11111 112322 2457999999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
|||+. +|.++||.++...........+....+...++|+++.+
T Consensus 178 gPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 178 GPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp CEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 99996 78999999984311222223566778888888888764
No 37
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.55 E-value=5.3e-13 Score=121.74 Aligned_cols=169 Identities=18% Similarity=0.153 Sum_probs=108.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||+|||+.....+.|++.. .+.+..+.+..++ .+||||||++.+- .
T Consensus 24 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (228)
T 1fxy_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (228)
T ss_dssp CEEEEEEECSSS-EEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CeeEEEEEeeCC-EEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCC
Confidence 357999999987 999999999766667777642 1234444444443 4699999999862 3
Q ss_pred CcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCCCCcccEEEE-----ccccCCCC
Q 015960 174 KLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATGPPIQGLIQI-----DAAINRGN 239 (397)
Q Consensus 174 ~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~-----~~~i~~G~ 239 (397)
.+.++.|.. ..+..|+.+++.||..... .......+.-+.... ... .......+.. ....|.||
T Consensus 103 ~v~picLp~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~~C~GD 180 (228)
T 1fxy_A 103 NVAPASLPT-APPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYP-GKITSNMFCVGFLEGGKDSCQGD 180 (228)
T ss_dssp TBCCCCCCS-SCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHST-TTCCTTEEEESCTTCSCBCCTTC
T ss_pred ceeccCCCC-CCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcC-CCCCCCEEEeccCCCCCccccCc
Confidence 567777764 3467899999999975321 122222222222111 110 1111233443 23579999
Q ss_pred cccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 240 SGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|||||+. +++++||++++... ......+....+...++|+++.++
T Consensus 181 SGgPL~~-~~~l~Gi~S~g~~C-~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 181 SGGPVVC-NGQLQGVVSWGDGC-AQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp TTCEEEE-TTEEEEEEEECSSS-SBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred cccceEE-CCEEEEEEEECCCC-CCCCCCEEEEEhHHHHHHHHHHHh
Confidence 9999995 67999999997532 222335667788888888888664
No 38
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.54 E-value=5.1e-13 Score=121.95 Aligned_cols=173 Identities=11% Similarity=0.092 Sum_probs=106.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC-------CcE-EEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD-------KTT-LDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~-------g~~-~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
...|+|.+|+++ ||||+|||+.....+.+...+ ... ...+.+..++ .+|||||+++.+- ..
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 101 (234)
T 3s69_A 23 GFFCSGTLINEE-WVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEH 101 (234)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTT
T ss_pred CeEEeEEEeeCC-EEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCCCc
Confidence 358999999987 999999999755444433221 111 1222332232 4699999998762 35
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCCC------ceeeeEEeecc---ccccCCCCCCcccEEEE-----ccccCCCCc
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRKF------TCTAGIISAFG---LEPITATGPPIQGLIQI-----DAAINRGNS 240 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~~------~~~~G~vs~~~---~~~~~~~~~~~~~~i~~-----~~~i~~G~S 240 (397)
+.++.|.. .....|+.+.+.||...... ......+.-+. +.............+.. ....|.|||
T Consensus 102 v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 180 (234)
T 3s69_A 102 IVPLSLPS-SPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDS 180 (234)
T ss_dssp BCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCT
T ss_pred ceeeecCC-CCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCC
Confidence 66777754 34567999999999853211 11222222111 11111101111223333 345789999
Q ss_pred ccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhcc
Q 015960 241 GGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFG 288 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g 288 (397)
||||+. +++++||++++....+.....+....+...++|+++.++..
T Consensus 181 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 181 GGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred ccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 999995 67899999998654433334577788889999999887643
No 39
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.54 E-value=3.5e-13 Score=123.17 Aligned_cols=171 Identities=12% Similarity=0.146 Sum_probs=106.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEec--C------CcEE--EEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLF--D------KTTL--DAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~--~------g~~~--~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
..|+|.+|+++ ||||+|||+... ..|.+. + .... ....+..++ .+|||||+++.+- .
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~ 102 (234)
T 3s9c_A 26 IHCAGALINRE-WVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYST 102 (234)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBT
T ss_pred EEEeeEEeeCC-EEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccCC
Confidence 46999999987 999999999754 444442 1 1111 122222232 3599999998762 3
Q ss_pred CcceeecCCCCCCCCCCeEEEEecCCCCC----CceeeeE---EeeccccccCCCCCCcccEEEE-----ccccCCCCcc
Q 015960 174 KLRSIPVGVSANLRIGQKVYAIGHPLGRK----FTCTAGI---ISAFGLEPITATGPPIQGLIQI-----DAAINRGNSG 241 (397)
Q Consensus 174 ~~~~~~l~~s~~~~~G~~V~~iG~p~g~~----~~~~~G~---vs~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SG 241 (397)
.+.++.|... ....|+.+++.||+.... ....... ++...+.............+.. ....|.||||
T Consensus 103 ~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 181 (234)
T 3s9c_A 103 HIAPVSLPSR-SRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSG 181 (234)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTT
T ss_pred cccccccCCC-CCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCC
Confidence 5677888643 456799999999975321 1122222 2222221111101111233443 2457899999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhccc
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFGK 289 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g~ 289 (397)
|||+. +++++||++++....+.....+....+...++|+++.++..+
T Consensus 182 gPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~~ 228 (234)
T 3s9c_A 182 GPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNR 228 (234)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTCS
T ss_pred CeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCCC
Confidence 99995 678999999986544433345777888899999999887543
No 40
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.54 E-value=4.5e-13 Score=122.64 Aligned_cols=173 Identities=13% Similarity=0.134 Sum_probs=107.6
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC------Cc--EEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD------KT--TLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~------g~--~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
...|+|.+|+++ ||||+|||+.....+.+-..+ .. .+..+.+..++ .+|||||+++.+- ..
T Consensus 25 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 103 (238)
T 4e7n_A 25 TLFCGGTLINQE-WVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKH 103 (238)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTT
T ss_pred CEEEEEEEecCC-EEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCc
Confidence 457999999987 999999999765444433322 11 11222222232 4699999998762 34
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccccCCC-----CCCcccEEEE-----ccccCCC
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPITAT-----GPPIQGLIQI-----DAAINRG 238 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~~~-----~~~~~~~i~~-----~~~i~~G 238 (397)
+.++.|.. .....|+.+++.||+.... .......+.-+........ .......+.. ....|.|
T Consensus 104 v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~G 182 (238)
T 4e7n_A 104 IAPFSLPS-SPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKG 182 (238)
T ss_dssp BCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTT
T ss_pred eeeeeCCC-CCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCC
Confidence 67777754 3466799999999985321 1122222222222111110 0111223333 2457899
Q ss_pred CcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhcc
Q 015960 239 NSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFG 288 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g 288 (397)
+|||||+. +++++||++++..........+....+...++|+++.++..
T Consensus 183 DSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 183 DSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp CTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred CCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 99999995 77899999998654433344577788889999999887643
No 41
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.54 E-value=4.1e-13 Score=122.21 Aligned_cols=166 Identities=16% Similarity=0.208 Sum_probs=104.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC----------CCCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ----------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~----------~~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||+|||+.. .+.|++.. ++.+..+-+..++ .+|||||+++.+-
T Consensus 24 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~ 100 (225)
T 1npm_A 24 LICGGVLVGDR-WVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANL 100 (225)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCC
T ss_pred eEEEEEEECCC-EEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCcccC
Confidence 47999999987 99999999963 34555531 2344444444443 3599999998762
Q ss_pred -CCcceeecCCCCCCCCCCeEEEEecCCCC------CCceeeeEEeeccccc---cCCCCCCcccEEEE----ccccCCC
Q 015960 173 -HKLRSIPVGVSANLRIGQKVYAIGHPLGR------KFTCTAGIISAFGLEP---ITATGPPIQGLIQI----DAAINRG 238 (397)
Q Consensus 173 -~~~~~~~l~~s~~~~~G~~V~~iG~p~g~------~~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~----~~~i~~G 238 (397)
..+.++.|... .+..|+.+++.||.... ........+.-+.... ... +......+.. ....|.|
T Consensus 101 ~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~C~G 178 (225)
T 1npm_A 101 GDKVKPVQLANL-CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYP-GKITEGMVCAGSSNGADTCQG 178 (225)
T ss_dssp SSSSCCCEECSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHST-TTCCTTEEEEECTTCCBCCTT
T ss_pred CCceeceECCCC-CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhC-CCCCCCEEeecCCCCCeecCC
Confidence 35778888653 46789999999998531 1122222332222111 110 0111233443 2467999
Q ss_pred CcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 239 NSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
||||||+. +|.++||++++....+.....+....+...++|+++.+
T Consensus 179 DSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (225)
T 1npm_A 179 DSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTM 224 (225)
T ss_dssp CTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHH
T ss_pred CCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 99999995 68999999988433332233466677777788877654
No 42
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.53 E-value=5.3e-14 Score=127.15 Aligned_cols=160 Identities=16% Similarity=0.133 Sum_probs=99.8
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC--CeE----EEEecC------CcEEEEEEEEEc--------CCCCeEEEEEcCC-
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA--SSV----KVTLFD------KTTLDAKVVGHD--------QGTDLAVLHIDAP- 171 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~--~~i----~V~~~~------g~~~~a~vv~~d--------~~~DlAlL~v~~~- 171 (397)
...|+|++|+++ +|||||||+.+. ..+ .|.+.. +..+..+-+..+ ..+|||||+++.+
T Consensus 29 ~~~CgGtLIs~~-~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~ 107 (215)
T 1p3c_A 29 GSSCTGTLIAPN-KILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI 107 (215)
T ss_dssp SCEEEEEEEETT-EEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSCH
T ss_pred CceEEEEEEeCC-EEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCCC
Confidence 358999999987 999999999643 333 666532 223444444433 2569999999985
Q ss_pred CCCcceeecCCCCCCCCCCeEEEEecCCCC----CCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecC
Q 015960 172 NHKLRSIPVGVSANLRIGQKVYAIGHPLGR----KFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDS 247 (397)
Q Consensus 172 ~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~----~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~ 247 (397)
...+.++.|... ....|+.++++||+... ........+..+.... +.....+...|.|+|||||+..
T Consensus 108 ~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~--------c~~~~~~~~~C~GDSGgPl~~~ 178 (215)
T 1p3c_A 108 GNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTRED--------TNLAYYTIDTFSGNSGSAMLDQ 178 (215)
T ss_dssp HHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEEC--------SSEEEECCCCCTTCTTCEEECT
T ss_pred cccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCccc--------chheeeccccCCCCCCCeeEcc
Confidence 123567777643 35789999999998421 1111111111111110 1122235678999999999987
Q ss_pred CccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 248 SGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 248 ~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
+|.|+||++++.... ...+....+....+|+++..
T Consensus 179 ~g~lvGi~S~g~~c~---~~p~v~t~v~~~~~WI~~~~ 213 (215)
T 1p3c_A 179 NQQIVGVHNAGYSNG---TINGGPKATAAFVEFINYAK 213 (215)
T ss_dssp TSCEEEECCEEEGGG---TEEEEEBCCHHHHHHHHHHH
T ss_pred CCeEEEEEecccCCC---ccCceeEechHHHHHHHHHh
Confidence 899999999886532 22333345556677776654
No 43
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.53 E-value=6.8e-13 Score=120.63 Aligned_cols=167 Identities=14% Similarity=0.124 Sum_probs=106.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+... +.|.+.. ++.+..+-+..++ .+|||||+++.+- ..
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~ 100 (223)
T 1lo6_A 24 LLCGGVLIHPL-WVLTAAHCKKPN--LQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSEL 100 (223)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTT--CEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred EEEEeEEecCC-EEEECccCCCCC--eEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCCc
Confidence 57999999987 999999999743 4454421 2344444444443 4699999999862 35
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCC----CceeeeEEeeccc---cccCCCCCCcccEEEE-----ccccCCCCccc
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRK----FTCTAGIISAFGL---EPITATGPPIQGLIQI-----DAAINRGNSGG 242 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~---~~~~~~~~~~~~~i~~-----~~~i~~G~SGG 242 (397)
+.++.|... ....|+.++++||..... .......+.-+.. ..... +......+.. ....|.|||||
T Consensus 101 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDsGg 178 (223)
T 1lo6_A 101 IQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYP-GQITQNMLCAGDEKYGKDSCQGDSGG 178 (223)
T ss_dssp BCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHST-TTCCTTEEEEECTTTCCBCCTTTTTC
T ss_pred eeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhC-CCCCCCeEEeecCCCCCeeccccCCC
Confidence 677888643 357899999999975421 1222222222211 11110 1111234443 24578999999
Q ss_pred ceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 243 PLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 243 Plvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||+. +|.++||++++....+.....+....+...++|+++.++
T Consensus 179 PL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 1lo6_A 179 PLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ 221 (223)
T ss_dssp EEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred cEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 9995 679999999874333323345667888888999988765
No 44
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.53 E-value=3.8e-13 Score=121.77 Aligned_cols=163 Identities=13% Similarity=0.190 Sum_probs=104.3
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC--CeEEEEecC---------CcEEEEEEEEEc------CCCCeEEEEEcCCC---C
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA--SSVKVTLFD---------KTTLDAKVVGHD------QGTDLAVLHIDAPN---H 173 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~--~~i~V~~~~---------g~~~~a~vv~~d------~~~DlAlL~v~~~~---~ 173 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|++.. .+.+..+-+..+ ..+|||||+++.+- .
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~~ 102 (218)
T 2z7f_E 24 HFCGATLIAPN-FVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATINA 102 (218)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCSS
T ss_pred cEEEEEEccCC-EEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCCC
Confidence 47999999987 999999999764 356776642 134444433332 34799999998762 3
Q ss_pred CcceeecCCCC-CCCCCCeEEEEecCCCCCC-----ceeeeEEeeccccccCCCCCCcccEEEE-----ccccCCCCccc
Q 015960 174 KLRSIPVGVSA-NLRIGQKVYAIGHPLGRKF-----TCTAGIISAFGLEPITATGPPIQGLIQI-----DAAINRGNSGG 242 (397)
Q Consensus 174 ~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~~-----~~~~G~vs~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SGG 242 (397)
.+.++.|.... .+..|+.+++.||+..... ......+.-+ ...... ..+.. ....|.|||||
T Consensus 103 ~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~------~~~Ca~~~~~~~~~C~GDSGg 175 (218)
T 2z7f_E 103 NVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR------SNVCTLVRGRQAGVCFGDSGS 175 (218)
T ss_dssp SCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT------TSEEEECTTSCCBCCTTCTTC
T ss_pred ceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc------ceeeeccCCCCCeeCCCcCCC
Confidence 56777776543 3568999999999753221 1222222222 111110 01222 24578999999
Q ss_pred ceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 243 PLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 243 Plvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
||+. +|.++||+++.....+.....+....+...++|+++.+
T Consensus 176 Pl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 176 PLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp EEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred ceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 9995 67999999984322332223466778888888888764
No 45
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.53 E-value=5.7e-13 Score=121.34 Aligned_cols=170 Identities=19% Similarity=0.206 Sum_probs=106.8
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCC--eEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGAS--SVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN--- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~--~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~--- 172 (397)
..|+|.+|+++ ||||+|||+.+.. .+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~ 102 (228)
T 2xw9_A 24 HLCGGVLVAEQ-WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLG 102 (228)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCB
T ss_pred eEEEEEEEeCC-EEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 47999999987 9999999997543 67777642 2344554444444 4699999998762
Q ss_pred CCcceeecCCC-CCCCCCCeEEEEecCCCCC-----Cceeee---EEeeccccccCCC-CCCcccEEEE---ccccCCCC
Q 015960 173 HKLRSIPVGVS-ANLRIGQKVYAIGHPLGRK-----FTCTAG---IISAFGLEPITAT-GPPIQGLIQI---DAAINRGN 239 (397)
Q Consensus 173 ~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~-----~~~~~G---~vs~~~~~~~~~~-~~~~~~~i~~---~~~i~~G~ 239 (397)
..+.++.|... ..+..|+.+.+.||..... ...... +++...+...... +......+.. ....|.|+
T Consensus 103 ~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 182 (228)
T 2xw9_A 103 PAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGD 182 (228)
T ss_dssp TTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTTC
T ss_pred CCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCCCCccCCCC
Confidence 24667777543 3467899999999975321 112222 2221111111110 1111233433 24578999
Q ss_pred cccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 240 SGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
|||||+. +|.++||++++...++.....+....+...++|+++.+
T Consensus 183 sGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 183 AGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp TTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred CcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 9999996 67999999987633332234566788888888988765
No 46
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.53 E-value=1.1e-12 Score=119.24 Aligned_cols=169 Identities=15% Similarity=0.161 Sum_probs=106.6
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC----------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD----------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN--- 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~----------g~~~~a~vv~~d~-------~~DlAlL~v~~~~--- 172 (397)
...|+|.+|+++ ||||+|||+.+. ..|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~ 99 (223)
T 2bdg_A 23 ELFCSGVLVHPQ-WVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSES 99 (223)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCC
Confidence 357999999987 999999999753 4444421 2344554444444 4699999998862
Q ss_pred CCcceeecCCCCCCCCCCeEEEEecCCCCCC----ceeeeEEeeccccccC--CCCCCcccEEEEc-----cccCCCCcc
Q 015960 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKF----TCTAGIISAFGLEPIT--ATGPPIQGLIQID-----AAINRGNSG 241 (397)
Q Consensus 173 ~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~vs~~~~~~~~--~~~~~~~~~i~~~-----~~i~~G~SG 241 (397)
..+.++.|.. ..+..|+.+++.||+..... ......+.-+...... .........+... ...|.||||
T Consensus 100 ~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 178 (223)
T 2bdg_A 100 DTIRSISIAS-QCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 178 (223)
T ss_dssp SSCCCCCBCS-SCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTT
T ss_pred CceecccCCC-CCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCC
Confidence 3567778764 34678999999999854321 2222222222211100 0001112334432 357899999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|||+. +|.++||++++....+.....+....+...++|+++.++
T Consensus 179 gPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 222 (223)
T 2bdg_A 179 GPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQ 222 (223)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHHH
T ss_pred chheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 99995 679999999985433323345667788888888887653
No 47
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.52 E-value=8.9e-13 Score=120.68 Aligned_cols=168 Identities=17% Similarity=0.196 Sum_probs=106.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ------------------GTDLAVL 166 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~------------------~~DlAlL 166 (397)
..|+|.+|+++ ||||||||+. ..+.|.+.. .+.+..+-+..++ .+|||||
T Consensus 22 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 98 (235)
T 1ton_A 22 YLCGGVLIDPS-WVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLL 98 (235)
T ss_dssp SEEEEEEEETT-EEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTCCEEE
T ss_pred CeEEEEEecCC-EEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCCEEEE
Confidence 47999999987 9999999996 344555431 2233343333333 3599999
Q ss_pred EEcCCC---CCcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccccCC--CCCCcccEEEE----
Q 015960 167 HIDAPN---HKLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPITA--TGPPIQGLIQI---- 231 (397)
Q Consensus 167 ~v~~~~---~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~~--~~~~~~~~i~~---- 231 (397)
+++.+- ..+.++.|... .+..|+.+++.||..... .......+.-+....... ........+..
T Consensus 99 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 177 (235)
T 1ton_A 99 HLSEPADITGGVKVIDLPTK-EPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEME 177 (235)
T ss_dssp EESSCCCCCSSCCCCCCCCS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTT
T ss_pred EcCCccccCCcceeeeCCCC-CCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCC
Confidence 999862 35678888653 467899999999975421 122222222222211110 01111233443
Q ss_pred -ccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 -DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 -~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+. +|.++||++++...+......+....+...++|+++.++
T Consensus 178 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 178 GGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 235789999999995 789999999884433322345677888888999988765
No 48
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.52 E-value=1.3e-12 Score=118.85 Aligned_cols=165 Identities=13% Similarity=0.139 Sum_probs=105.8
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC--CeEEEEecCC----------cEEEEEEEEEc------CCCCeEEEEEcCCC---
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA--SSVKVTLFDK----------TTLDAKVVGHD------QGTDLAVLHIDAPN--- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~--~~i~V~~~~g----------~~~~a~vv~~d------~~~DlAlL~v~~~~--- 172 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+... +.+..+-+..+ ..+|||||+++.+-
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~ 102 (225)
T 1a7s_A 24 HFCGGALIHAR-FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLT 102 (225)
T ss_dssp EEEEEEEEETT-EEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCCB
T ss_pred cEEEEEEeeCC-EEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccCC
Confidence 47999999987 999999999753 4567776421 34444333332 35799999998862
Q ss_pred CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCCCCCCcccEEEE-----ccccCCCCcc
Q 015960 173 HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITATGPPIQGLIQI-----DAAINRGNSG 241 (397)
Q Consensus 173 ~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SG 241 (397)
..+.++.|.... .+..|+.+++.||+.... .......+.-+....... ..+.. ....|.||||
T Consensus 103 ~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~------~~~Ca~~~~~~~~~C~GDSG 176 (225)
T 1a7s_A 103 SSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP------NNVCTGVLTRRGGICNGDGG 176 (225)
T ss_dssp TTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT------TEEEEECSSSSCBCCTTCTT
T ss_pred CceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc------CceEEeccCCCCCcccCCCc
Confidence 246777776433 247899999999985432 122222222222211111 22332 2367999999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhcc
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFG 288 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g 288 (397)
|||+.. |.++||++++....+.. .+....+...++|+++.++..
T Consensus 177 gPl~~~-g~l~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 177 TPLVCE-GLAHGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp CEEEET-TEEEEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHHSC
T ss_pred chheeC-CEEEEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhcCC
Confidence 999964 79999999984333322 567788888999999887643
No 49
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.52 E-value=1.4e-12 Score=118.49 Aligned_cols=167 Identities=14% Similarity=0.152 Sum_probs=106.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+.+ .+.|++.. .+.+..+-+..++ .+||||||++.+- ..
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 99 (222)
T 1hj8_A 23 HFCGGSLVNEN-WVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTY 99 (222)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSS
T ss_pred cEEEeEEecCC-EEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCc
Confidence 47999999987 99999999974 34455421 2344444444444 4699999999862 34
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccC--CCCCCcccEEEEc-----cccCCCCccc
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPIT--ATGPPIQGLIQID-----AAINRGNSGG 242 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~i~~~-----~~i~~G~SGG 242 (397)
+.++.|... .+..|+.+++.||+.... .......+.-+...... ..+......+... ...|.|||||
T Consensus 100 v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 178 (222)
T 1hj8_A 100 VQPVALPTS-CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGG 178 (222)
T ss_dssp CCCCBCCSS-CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTC
T ss_pred eeccCCCCC-CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCccc
Confidence 678888643 467899999999985422 12222222222211100 0011112334432 3578999999
Q ss_pred ceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 243 PLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 243 Plvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||+. +|+++||++++... ......+....+...++|+++.++
T Consensus 179 PL~~-~~~l~Gi~S~g~~C-~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 179 PVVC-NGELQGVVSWGYGC-AEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp EEEE-TTEEEEEEEECSSS-SCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ceEE-CCEEEEEEeecCCC-CCCCcCcEEEEhHHhHHHHHHHhh
Confidence 9995 78999999998542 222335667788888899887654
No 50
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.52 E-value=1.4e-12 Score=118.77 Aligned_cols=167 Identities=14% Similarity=0.117 Sum_probs=105.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC----------CcEEEEEEEEEcC-------CCCeEEEEEcCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD----------KTTLDAKVVGHDQ-------GTDLAVLHIDAP---NH 173 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~----------g~~~~a~vv~~d~-------~~DlAlL~v~~~---~~ 173 (397)
..|+|.+|+++ ||||+|||+.+. +.|++.. .+.+..+-+..++ .+||||||++.+ ..
T Consensus 25 ~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (227)
T 2psx_A 25 LYCGAVLVHPQ-WLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTK 101 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCCS
T ss_pred ceEEEEEEcCC-EEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCCC
Confidence 47999999987 999999999753 3444421 2344444343443 469999999986 23
Q ss_pred CcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCCCCcccEEEE----ccccCCCCc
Q 015960 174 KLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATGPPIQGLIQI----DAAINRGNS 240 (397)
Q Consensus 174 ~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~----~~~i~~G~S 240 (397)
.+.++.|.. ..+..|+.+++.||..... .......+.-+.... ... .......+.. ....|.|||
T Consensus 102 ~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~C~GDS 179 (227)
T 2psx_A 102 DVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYP-RQIDDTMFCAGDKAGRDSCQGDS 179 (227)
T ss_dssp SSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHST-TTCCTTEEEECCSTTCBCCTTCT
T ss_pred ceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcC-CCCCCCEEcccCCCCCccCCCCC
Confidence 567888864 4577899999999975322 122222222221111 110 0011233443 235789999
Q ss_pred ccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 241 GGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||+. ++.++||++++..........+....+...++|+++.++
T Consensus 180 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 224 (227)
T 2psx_A 180 GGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQ 224 (227)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHH
T ss_pred Ccceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999995 679999999874333322335667888888888888664
No 51
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.52 E-value=4.4e-13 Score=122.50 Aligned_cols=169 Identities=11% Similarity=0.136 Sum_probs=105.4
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecCC--------cEEEEEEEEEcC-------CCCeEEEEEcCCC---CCc
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDK--------TTLDAKVVGHDQ-------GTDLAVLHIDAPN---HKL 175 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g--------~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~~ 175 (397)
..|+|.+|+++ ||||+|||+.+...+.+-..+. +.+..+-+..++ .+|||||+++.+- ..+
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v 101 (231)
T 2aiq_A 23 SLCGGTLINQE-WVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHI 101 (231)
T ss_dssp EEEEEEECSSS-EEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBTTB
T ss_pred CeEEEEEEeCC-EEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCCcE
Confidence 47999999987 9999999998743333322211 223333333333 4699999999862 346
Q ss_pred ceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCCCCcccEEEE-----ccccCCCCcc
Q 015960 176 RSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATGPPIQGLIQI-----DAAINRGNSG 241 (397)
Q Consensus 176 ~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~-----~~~i~~G~SG 241 (397)
.++.|... ....|+.++++||+.... .......+.-+.... ... + .....+.. ....|.||||
T Consensus 102 ~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~-~~~~~~Ca~~~~~~~~~C~GDSG 178 (231)
T 2aiq_A 102 APLSLPSN-PPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYK-G-LAATTLCAGILEGGKDTCKGDSG 178 (231)
T ss_dssp CCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCT-T-CCSSEEEEECTTCSCBCCTTCTT
T ss_pred EeeECCCC-CCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhc-C-CCcCcEEeccCCCCCcccCCcCC
Confidence 77887643 356899999999985321 122222222221111 110 0 11223333 2457899999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
|||+. +|+++||++++..........+....+...++|+++.++.
T Consensus 179 gPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 179 GPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp CEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 99995 6899999999843333223356678888899999887764
No 52
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.52 E-value=3.9e-13 Score=123.26 Aligned_cols=168 Identities=14% Similarity=0.166 Sum_probs=105.4
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ------------------GTDLAVL 166 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~------------------~~DlAlL 166 (397)
..|+|.+|+++ ||||||||+. ..+.|.+.. ++.+..+-+..++ .+|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1gvz_A 24 FQCGGVLVHPQ-WVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLL 100 (237)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEE
T ss_pred eEEEeEEeeCC-EEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEEE
Confidence 47999999987 9999999997 344555431 2344444444443 6799999
Q ss_pred EEcCCC---CCcceeecCCCCCCCCCCeEEEEecCCCCC-C-----ceeeeEEeeccccccCCC--CCCcccEEEEc---
Q 015960 167 HIDAPN---HKLRSIPVGVSANLRIGQKVYAIGHPLGRK-F-----TCTAGIISAFGLEPITAT--GPPIQGLIQID--- 232 (397)
Q Consensus 167 ~v~~~~---~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~-~-----~~~~G~vs~~~~~~~~~~--~~~~~~~i~~~--- 232 (397)
+++.+- ..+.++.|... .+..|+.+.+.||..... . ......+.-+........ .......+...
T Consensus 101 ~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 179 (237)
T 1gvz_A 101 RLAQPARITDAVKILDLPTQ-EPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRD 179 (237)
T ss_dssp EESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSS
T ss_pred EeCCCcccCCcEeeeECCCC-CCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeCC
Confidence 999862 35677888643 467899999999985421 1 112222222221111110 00012234332
Q ss_pred --cccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 233 --AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 233 --~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
...|.|||||||+. +|.++||++++...++.....+....+...++|+++.++
T Consensus 180 ~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1gvz_A 180 DSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234 (237)
T ss_dssp TTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHH
T ss_pred CCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 34689999999995 789999999885333222234566778888888887664
No 53
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.51 E-value=1.3e-12 Score=118.42 Aligned_cols=166 Identities=14% Similarity=0.152 Sum_probs=106.6
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEec---------CCcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLF---------DKTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~---------~g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+.+. +.|++. +.+.+..+-+..++ .+|||||+++.+- ..
T Consensus 23 ~~C~GtLI~~~-~VLTAAhC~~~~--~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~ 99 (223)
T 4i8h_A 23 HFCGGSLINSQ-WVVSAAHCYKSG--IQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSR 99 (223)
T ss_dssp EEEEEEECSSS-EEEECGGGCCSS--CEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred cEEEEEEEcCC-EEEecHHhCCCC--cEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCc
Confidence 47999999987 999999999854 344442 12344444444554 4699999998762 35
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCCC------ceeeeEEeeccccc---cCCCCCCcccEEEE-----ccccCCCCc
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRKF------TCTAGIISAFGLEP---ITATGPPIQGLIQI-----DAAINRGNS 240 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~~------~~~~G~vs~~~~~~---~~~~~~~~~~~i~~-----~~~i~~G~S 240 (397)
+.++.|... ....|+.+++.||...... ......+.-+.... ... .......+.. ....|.|+|
T Consensus 100 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDs 177 (223)
T 4i8h_A 100 VASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYP-GQITSNMFCAGYLEGGKDSCQGDS 177 (223)
T ss_dssp BCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHST-TTCCTTEEEESCTTSSCBCCTTCT
T ss_pred eeceECCCC-CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhC-CCCCCCeEeccCCCCCCccCCCCC
Confidence 677888643 3688999999999753221 12222222221111 110 1111233443 245689999
Q ss_pred ccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 241 GGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||+. +++++||++++.... .....+....+...++|+++.++
T Consensus 178 GgPl~~-~~~l~Gi~S~g~~c~-~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 178 GGPVVC-SGKLQGIVSWGSGCA-QKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp TCEEEE-TTEEEEEEEECSSSS-CTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCcEEE-CCEEEEEEEcCCCCC-CCCCCeEEEEHHHHHHHHHHHHh
Confidence 999995 679999999985432 22335677888888999988765
No 54
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.51 E-value=2.4e-12 Score=117.80 Aligned_cols=171 Identities=16% Similarity=0.116 Sum_probs=106.7
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||+|||+.+ ....|.+.. .+.+..+-+..++ .+|||||+++.+- .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 100 (234)
T 1orf_A 23 KTICAGALIAKD-WVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINK 100 (234)
T ss_dssp SCEEEEEEEETT-EEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSS
T ss_pred ceEEEEEEeeCC-EEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCC
Confidence 458999999987 99999999975 345565532 2344444444443 4699999998762 3
Q ss_pred CcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccC---CCCCC---cccEEEE-----ccccC
Q 015960 174 KLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPIT---ATGPP---IQGLIQI-----DAAIN 236 (397)
Q Consensus 174 ~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~---~~~~~---~~~~i~~-----~~~i~ 236 (397)
.+.++.|.... .+..|+.+.+.||..... .......+.-+...... ..... ....+.. ....|
T Consensus 101 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C 180 (234)
T 1orf_A 101 YVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSC 180 (234)
T ss_dssp SSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCC
T ss_pred CeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCC
Confidence 46777776443 247899999999975321 12222333222221111 00000 0133443 23578
Q ss_pred CCCcccceecCCccEEEEEeeeec-cCCCccCceeeEecc-chhHHHHHHHh
Q 015960 237 RGNSGGPLLDSSGSLIGVNTSIIT-RTDAFCGMACSIPID-TVSGIVDQLVK 286 (397)
Q Consensus 237 ~G~SGGPlvn~~G~vVGI~s~~~~-~~~~~~~~~~aip~~-~i~~~~~~l~~ 286 (397)
.|||||||+. +|.++||++++.. .++.....+....+. ...+|+++.++
T Consensus 181 ~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~ 231 (234)
T 1orf_A 181 NGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK 231 (234)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred CCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHH
Confidence 9999999995 7899999999862 233223356667777 77888877654
No 55
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.51 E-value=8.2e-13 Score=121.10 Aligned_cols=167 Identities=16% Similarity=0.116 Sum_probs=105.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ------------------GTDLAVL 166 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~------------------~~DlAlL 166 (397)
..|+|.+|+++ ||||+|||+.+ .+.|.+.. .+.+..+-+..++ .+|||||
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1ao5_A 24 HICGGVLLDRN-WVLTAAHCYVD--QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLL 100 (237)
T ss_dssp EEEEEEEEETT-EEEECTTCCCS--SCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEE
T ss_pred eEEEEEEeeCC-EEEECHHHCCC--CCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEEE
Confidence 47999999987 99999999963 45555532 2233333333332 5799999
Q ss_pred EEcCCC---CCcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccc---cccCCCCCCcccEEEEc--
Q 015960 167 HIDAPN---HKLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGL---EPITATGPPIQGLIQID-- 232 (397)
Q Consensus 167 ~v~~~~---~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~---~~~~~~~~~~~~~i~~~-- 232 (397)
+++.+- ..+.++.|.. ..+..|+.+++.||..... .......+.-+.. ..... .......+...
T Consensus 101 ~L~~~~~~~~~v~picL~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~ 178 (237)
T 1ao5_A 101 RLSKPADITDVVKPIALPT-KEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYL-QKVTDVMLCAGEM 178 (237)
T ss_dssp EESSCCCCCSSSCCCCCCC-SCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCS-SCCCTTEEEEECT
T ss_pred EeCCccccCCceeCCCcCC-CCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhc-ccCCCCEEEEccC
Confidence 999862 3567888864 3467899999999975321 1122222222211 11110 00112334432
Q ss_pred ---cccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 233 ---AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 233 ---~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
...|.|||||||+. +|.++||++++...++.....+....+...++|+++.++
T Consensus 179 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1ao5_A 179 GGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM 234 (237)
T ss_dssp TCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 35789999999995 789999999984333322335667788888899887664
No 56
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.51 E-value=1.9e-12 Score=117.65 Aligned_cols=167 Identities=14% Similarity=0.149 Sum_probs=106.3
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+. ..+.|++.. ++.+..+-+..++ .+||||||++.+- ..
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 99 (223)
T 3mfj_A 23 HFCGGSLINSQ-WVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSR 99 (223)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEecCC-EEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCCc
Confidence 57999999987 9999999995 345555531 2344444444444 4699999999862 35
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccccC--CCCCCcccEEEEc-----cccCCCCcc
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPIT--ATGPPIQGLIQID-----AAINRGNSG 241 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~--~~~~~~~~~i~~~-----~~i~~G~SG 241 (397)
+.++.|... ....|+.+++.||+.... .......+.-+...... .........+... ...|.||||
T Consensus 100 v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 178 (223)
T 3mfj_A 100 VASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSG 178 (223)
T ss_dssp BCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTT
T ss_pred EeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCcc
Confidence 678888653 357899999999985421 11222222222211100 0011112344432 357899999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|||+. +|+++||++++... ......+....+...++|+++.++
T Consensus 179 gPL~~-~~~l~GI~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 179 GPVVC-SGKLQGIVSWGSGC-AQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp CEEEE-TTEEEEEEEECSSS-SBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred cceEE-CCEEEEEEEECCCC-CCCCCCeEEEEHHHhHHHHHHHHh
Confidence 99995 78999999998532 222335667788888899887654
No 57
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.51 E-value=5e-13 Score=121.76 Aligned_cols=168 Identities=17% Similarity=0.204 Sum_probs=108.6
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||+|||+.+...+.|.+.. ...+..+-+..++ .+|||||+++.+- .
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~ 101 (226)
T 1azz_A 23 MYFCGGSLISPE-WILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTA 101 (226)
T ss_dssp TEEEEEEEEETT-EEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCS
T ss_pred cEEEEEEEecCC-EEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCC
Confidence 358999999987 999999999887778887742 1233333333443 4699999998862 3
Q ss_pred CcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeecc---ccccCCCCCCcccEEEE----ccccCCCCc
Q 015960 174 KLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFG---LEPITATGPPIQGLIQI----DAAINRGNS 240 (397)
Q Consensus 174 ~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~----~~~i~~G~S 240 (397)
.+.++.|.... ...|+.+++.||..... .......+.-+. +..... ......+.. ....|.|||
T Consensus 102 ~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~--~~~~~~~Ca~~~~~~~~C~GDS 178 (226)
T 1azz_A 102 AIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYG--IVTDGNICIDSTGGKGTCNGDS 178 (226)
T ss_dssp SSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHS--CCCTTEEEECCTTTCBCCTTCT
T ss_pred CcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhC--cCCCceEeecCCCCCccCCCCC
Confidence 56777776544 47899999999975322 112222222111 111100 011233433 235789999
Q ss_pred ccceecCCccEEEEEeeeec-cCCCccCceeeEeccchhHHHHHHHh
Q 015960 241 GGPLLDSSGSLIGVNTSIIT-RTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~-~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||+ .+|.++||++++.. ... ....+....+...++|+++..+
T Consensus 179 GgPL~-~~~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~~ 223 (226)
T 1azz_A 179 GGPLN-YNGLTYGITSFGAAAGCE-AGYPDAFTRVTYFLDWIQTQTG 223 (226)
T ss_dssp TCEEE-ETTEEEEEEEEEETTCTT-SCCCEEEEESGGGHHHHHHHHC
T ss_pred CcceE-ECCEEEEEEEEECCCCCC-CCCCCEEEEHHHHHHHHHHHhC
Confidence 99999 57899999999863 222 2335666788888899888653
No 58
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.51 E-value=2.7e-12 Score=116.62 Aligned_cols=182 Identities=16% Similarity=0.155 Sum_probs=111.3
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcCC-
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQG- 160 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~~- 160 (397)
-|-+|.|..... ......|+|.+|+++ ||||+|||+.+ .+.|.+.. .+.+..+-+..++.
T Consensus 12 ~Pw~v~l~~~~~-------~~~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y 81 (226)
T 4ag1_A 12 RPYMAYLEIVTS-------NGPSKFCGGFLIRRN-FVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPKY 81 (226)
T ss_dssp STTEEEEEEECS-------SSSCEEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTC
T ss_pred CCcEEEEEEEcC-------CCcccEEEEEEEeCC-EEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCCC
Confidence 455677754321 122457999999987 99999999954 56666532 13344444455553
Q ss_pred ------CCeEEEEEcCCC---CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC-CCCC
Q 015960 161 ------TDLAVLHIDAPN---HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA-TGPP 224 (397)
Q Consensus 161 ------~DlAlL~v~~~~---~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~-~~~~ 224 (397)
+|||||+++.+- ..+.++.+.... .+..|+.+.+.||..... .......+.-+....... ....
T Consensus 82 ~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 161 (226)
T 4ag1_A 82 NTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFD 161 (226)
T ss_dssp CTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTCC
T ss_pred CCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCcC
Confidence 699999998752 345666665433 357899999999975321 122222232222222110 1111
Q ss_pred cccEEEE-----ccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 225 IQGLIQI-----DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 225 ~~~~i~~-----~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....+.. ....|.|||||||+. ++.++||++++...... .+....+...++|+++.++
T Consensus 162 ~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~---p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 162 HNLQLCVGNPRKTKSAFKGDSGGPLLC-AGVAQGIVSYGRSDAKP---PAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp TTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECBTTCCS---CEEEEEHHHHHHHHHHHHH
T ss_pred ccceEeeccCCCCCcCccCCCCCceEE-cCEEEEEEEECCCCCCC---CCEEEEhHHHHHHHHHHHh
Confidence 1233443 245789999999995 77999999998653221 5666777788888888765
No 59
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.51 E-value=1.6e-12 Score=119.57 Aligned_cols=172 Identities=16% Similarity=0.201 Sum_probs=108.8
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------C--CCeEEEEEcCCC---
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------G--TDLAVLHIDAPN--- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~--~DlAlL~v~~~~--- 172 (397)
..|+|.+|+++ ||||+|||+.....+.|.+.. .+.+..+-+..++ . +|||||+++.+-
T Consensus 28 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1bru_P 28 HTCGGTLVDQS-WVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLT 106 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCC
T ss_pred eEEEeEEeeCC-EEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 47999999987 999999999865677777642 2344554444443 2 799999999862
Q ss_pred CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC---CCC-CcccEEEEc----cccCCC
Q 015960 173 HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA---TGP-PIQGLIQID----AAINRG 238 (397)
Q Consensus 173 ~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~~----~~i~~G 238 (397)
..+.++.|.... .+..|+.+++.||..... .......+.-+....... .+. .....+... ...|.|
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (241)
T 1bru_P 107 DKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNG 186 (241)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTT
T ss_pred CccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCC
Confidence 356777776543 356899999999975321 122222222222111111 010 012334432 357899
Q ss_pred CcccceecC--Cc--cEEEEEeeeec-cCCCccCceeeEeccchhHHHHHHHh
Q 015960 239 NSGGPLLDS--SG--SLIGVNTSIIT-RTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 239 ~SGGPlvn~--~G--~vVGI~s~~~~-~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||||+-. +| .|+||++++.. .+......+....+...++|+++.++
T Consensus 187 DSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 239 (241)
T 1bru_P 187 DSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA 239 (241)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999999943 56 79999999863 22222335666788888888887654
No 60
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.51 E-value=2e-13 Score=124.07 Aligned_cols=167 Identities=16% Similarity=0.176 Sum_probs=107.6
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. ++.+..+-+..++ .+|||||+++.+- ..
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~ 102 (222)
T 1eq9_A 24 HRCGASILDNN-NVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDL 102 (222)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCc
Confidence 47999999987 999999999763 457777642 3455555555554 4699999999862 35
Q ss_pred cceeecCCCCCCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccC--CCCCCcccEEEE----ccccCCCCcccc
Q 015960 175 LRSIPVGVSANLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPIT--ATGPPIQGLIQI----DAAINRGNSGGP 243 (397)
Q Consensus 175 ~~~~~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~i~~----~~~i~~G~SGGP 243 (397)
+.|+.|........|+.+++.||..... .......+.-+...... ..+ .....+.. ....|.||||||
T Consensus 103 v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~C~GDSGgP 181 (222)
T 1eq9_A 103 VQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICTLTKRGEGACHGDSGGP 181 (222)
T ss_dssp BCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEECCCTTCBCCTTCTTCE
T ss_pred eEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEeecCCCCCeeeeCCccce
Confidence 6788886554446889999999975321 11222222221111110 001 11233433 235789999999
Q ss_pred eecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 244 LLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 244 lvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
|+. +|.++||++++.... . ...+....+...++|+++.+
T Consensus 182 L~~-~~~l~GI~S~g~~C~-~-~~p~vyt~V~~~~~WI~~~~ 220 (222)
T 1eq9_A 182 LVA-NGAQIGIVSFGSPCA-L-GEPDVYTRVSSFVSWINANL 220 (222)
T ss_dssp EEE-TTEEEEEEEECSTTT-S-SSCEEEEEGGGGHHHHHHTS
T ss_pred EEE-CCEEEEEEEECCCcC-C-CCCCEEEEHHHHHHHHHHHh
Confidence 995 689999999985322 1 33566678888888887754
No 61
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.51 E-value=1.4e-12 Score=119.85 Aligned_cols=171 Identities=15% Similarity=0.157 Sum_probs=108.0
Q ss_pred CceeEEEEEcCCCEEEEcccccCC---CCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC-
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEG---ASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN- 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~---~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~- 172 (397)
...|+|.+|+++ ||||+|||+.+ ...+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 25 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~ 103 (240)
T 1mza_A 25 HHVCGGVLIDPQ-WVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAK 103 (240)
T ss_dssp EEEEEEEEEETT-EEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCC
T ss_pred ceEEEEEEecCC-EEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCcc
Confidence 357999999987 99999999864 4566777632 2344444444443 4799999999862
Q ss_pred --CCcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccccC---CC-C--CCcccEEEE-----cc
Q 015960 173 --HKLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPIT---AT-G--PPIQGLIQI-----DA 233 (397)
Q Consensus 173 --~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~---~~-~--~~~~~~i~~-----~~ 233 (397)
..+.++.|.....+..|+.+++.||..... .......+.-+...... .. + ......+.. ..
T Consensus 104 ~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~ 183 (240)
T 1mza_A 104 LNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQK 183 (240)
T ss_dssp CBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCC
T ss_pred cCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCC
Confidence 356778886545578899999999975321 12222233222211111 00 0 111233443 24
Q ss_pred ccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccc-hhHHHHHHHh
Q 015960 234 AINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDT-VSGIVDQLVK 286 (397)
Q Consensus 234 ~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~-i~~~~~~l~~ 286 (397)
..|.|||||||+. +|.++||++++... +.....+....+.. .++|+++.++
T Consensus 184 ~~C~GDSGGPL~~-~~~l~Gi~S~g~~C-~~~~~p~vyt~v~~~y~~WI~~~~~ 235 (240)
T 1mza_A 184 DSCKGDAGGPLIC-KGVFHAIVSGGHEC-GVATKPGIYTLLTKKYQTWIKSNLV 235 (240)
T ss_dssp CCCTTCTTCEEEE-TTEEEEEECSSCCS-SCTTCCEEEEECCHHHHHHHHHHTC
T ss_pred ccCCCCCCCeeEE-CCEEEEEEEECCCC-CCCCCCcEEEeChHHHHHHHHHhcc
Confidence 5789999999995 68999999987532 22223455566766 8888887654
No 62
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.51 E-value=2.4e-12 Score=117.06 Aligned_cols=166 Identities=16% Similarity=0.153 Sum_probs=105.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+.+ .+.|++.. .+.+..+-+..++ .+|||||+++.+- ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (224)
T 1cgh_A 27 SRCGGFLVRED-FVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRN 103 (224)
T ss_dssp CEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCc
Confidence 58999999987 99999999976 35555531 2345555454554 3599999998862 35
Q ss_pred cceeecCCCC-CCCCCCeEEEEecCCCCC----CceeeeEEeeccccccC--CCCCCcccEEEEc-----cccCCCCccc
Q 015960 175 LRSIPVGVSA-NLRIGQKVYAIGHPLGRK----FTCTAGIISAFGLEPIT--ATGPPIQGLIQID-----AAINRGNSGG 242 (397)
Q Consensus 175 ~~~~~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~~~~~--~~~~~~~~~i~~~-----~~i~~G~SGG 242 (397)
+.++.|.... .+..|+.+++.||..... .......+.-+...... .........+... ...|.|||||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 183 (224)
T 1cgh_A 104 VNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGG 183 (224)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTC
T ss_pred eEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCcc
Confidence 6777776443 357899999999975431 12222222222211100 0000111244432 3578999999
Q ss_pred ceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 243 PLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 243 Plvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||+. +|.++||++++.. . ....+....+...++|+++.++
T Consensus 184 PL~~-~~~l~Gi~S~g~~-~--~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 184 PLLC-NNVAHGIVSYGKS-S--GVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp EEEE-TTEEEEEEEECCT-T--CCSCEEEEEGGGGHHHHHHHHH
T ss_pred ceEE-ccEEEEEEEEECC-C--CCCCeEEEEHHHhHHHHHHHhh
Confidence 9995 6799999998752 1 2234666788888888887654
No 63
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.51 E-value=7.1e-13 Score=120.77 Aligned_cols=166 Identities=14% Similarity=0.142 Sum_probs=105.0
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+.+ .+.|++.. .+.+..+-+..++ .+||||||++.+- ..
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1iau_A 27 KRCGGFLIRDD-FVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRA 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEEcCC-EEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCc
Confidence 57999999987 99999999975 45565532 2344555444444 4699999998762 34
Q ss_pred cceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccc---cCCCCCCcccEEEE-----ccccCCCCc
Q 015960 175 LRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEP---ITATGPPIQGLIQI-----DAAINRGNS 240 (397)
Q Consensus 175 ~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~-----~~~i~~G~S 240 (397)
+.++.|.... .+..|+.+++.||..... .......+.-+.... ...........+.. ....|.|||
T Consensus 104 v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 183 (227)
T 1iau_A 104 VQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDS 183 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCT
T ss_pred eecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCC
Confidence 6777776443 257899999999975321 122222222221111 00000001113443 245789999
Q ss_pred ccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 241 GGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||+. +|.++||++++- ......+....+....+|+++.++
T Consensus 184 GgPL~~-~~~l~Gi~S~gc---~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 184 GGPLVC-NKVAQGIVSYGR---NNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp TSEEEE-TTEEEEEEEEEC---TTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred CchheE-eeEEEEEEeEec---CCCCCCeEEEEHHHHHHHHHHHHh
Confidence 999995 679999999972 112234666788888888887664
No 64
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.51 E-value=1.3e-12 Score=120.05 Aligned_cols=172 Identities=15% Similarity=0.204 Sum_probs=108.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC---------CCCeEEEEEcCCC---
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ---------GTDLAVLHIDAPN--- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~---------~~DlAlL~v~~~~--- 172 (397)
..|+|.+|+++ ||||+|||+.+...+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 28 ~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (240)
T 1gvk_B 28 HTCGGTLIRQN-WVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLN 106 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCB
T ss_pred ceEEEEEeeCC-EEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccC
Confidence 47999999987 999999999887778887742 2344444444443 5699999998762
Q ss_pred CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC---CCC-CcccEEEEc----cccCCC
Q 015960 173 HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA---TGP-PIQGLIQID----AAINRG 238 (397)
Q Consensus 173 ~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~~----~~i~~G 238 (397)
..+.++.|.... .+..|+.+++.||..... .......+.-+....... .+. .....+... ...|.|
T Consensus 107 ~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (240)
T 1gvk_B 107 SYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQG 186 (240)
T ss_dssp TTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTT
T ss_pred CCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCC
Confidence 346677775443 356899999999975321 112222221111111110 010 012334432 356899
Q ss_pred CcccceecC-Cc--cEEEEEeeeec-cCCCccCceeeEeccchhHHHHHHHh
Q 015960 239 NSGGPLLDS-SG--SLIGVNTSIIT-RTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 239 ~SGGPlvn~-~G--~vVGI~s~~~~-~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||||+-. +| .++||++++.. .++.....+....+....+|+++.++
T Consensus 187 DSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 187 DSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 999999853 56 79999999752 23222335666788888888887654
No 65
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.50 E-value=8.6e-13 Score=120.87 Aligned_cols=170 Identities=16% Similarity=0.198 Sum_probs=107.4
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC---------CCCeEEEEEcCCC---
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ---------GTDLAVLHIDAPN--- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~---------~~DlAlL~v~~~~--- 172 (397)
..|+|.+|+++ +|||+|||+.+...+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 28 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~ 106 (236)
T 1elt_A 28 HTCGGSLIRQG-WVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLN 106 (236)
T ss_dssp EEEEEEEEETT-EEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCS
T ss_pred eEEEEEEEeCC-EEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccC
Confidence 47999999987 999999999887778887742 2344454444443 5699999998762
Q ss_pred CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC---CCC-CcccEEEEc---cccCCCC
Q 015960 173 HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA---TGP-PIQGLIQID---AAINRGN 239 (397)
Q Consensus 173 ~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~~---~~i~~G~ 239 (397)
..+.++.|.... .+..|+.+++.||+.... .......+.-+....... .+. .....+... ...|.|+
T Consensus 107 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 186 (236)
T 1elt_A 107 SAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGD 186 (236)
T ss_dssp SSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTC
T ss_pred CcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCC
Confidence 346777776543 356899999999985421 112222221111111110 010 012334432 4568999
Q ss_pred cccceecC-Cc--cEEEEEeeeec-cCCCccCceeeEeccchhHHHHHH
Q 015960 240 SGGPLLDS-SG--SLIGVNTSIIT-RTDAFCGMACSIPIDTVSGIVDQL 284 (397)
Q Consensus 240 SGGPlvn~-~G--~vVGI~s~~~~-~~~~~~~~~~aip~~~i~~~~~~l 284 (397)
|||||+-. +| .++||++++.. .++.....+....+...++|+++.
T Consensus 187 SGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (236)
T 1elt_A 187 SGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235 (236)
T ss_dssp TTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHhh
Confidence 99999954 56 79999998742 333223356667788888888764
No 66
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.49 E-value=1.9e-12 Score=117.59 Aligned_cols=182 Identities=14% Similarity=0.123 Sum_probs=112.4
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcCC-
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQG- 160 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~~- 160 (397)
-|-+|.|..... ......|+|.+|+++ ||||+|||+.. .+.|.+.. .+.+..+-+..++.
T Consensus 12 ~Pw~v~l~~~~~-------~~~~~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y 81 (227)
T 3fzz_A 12 RPYMAYYEFLKV-------GGKKMFCGGFLVRDK-FVLTAAHCKGR--SMTVTLGAHNIKAKEETQQIIPVAKAIPHPDY 81 (227)
T ss_dssp STTEEEEEEECS-------SSCEEEEEEEEEETT-EEEECTTCCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTC
T ss_pred cCCEEEEEEEeC-------CCceeEEEEEEEeCC-EEEECcccCCC--CcEEEEcccccCCCCCCceEEEEEEEEECcCC
Confidence 356677754321 112347999999987 99999999853 45555531 23445554555553
Q ss_pred ------CCeEEEEEcCCC---CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeecccccc---CCCC
Q 015960 161 ------TDLAVLHIDAPN---HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPI---TATG 222 (397)
Q Consensus 161 ------~DlAlL~v~~~~---~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~---~~~~ 222 (397)
+|||||+++.+- ..+.++.|.... .+..|+.+++.||..... .......+.-+..... ....
T Consensus 82 ~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 161 (227)
T 3fzz_A 82 NPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSS 161 (227)
T ss_dssp BTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTT
T ss_pred CCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccc
Confidence 699999998752 346777775433 357899999999975321 1222222322221111 0001
Q ss_pred CCcccEEEE-----ccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 223 PPIQGLIQI-----DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 223 ~~~~~~i~~-----~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
......+.. ....|.|+|||||+. ++.++||++++..... ..+....+...++|+++.++
T Consensus 162 ~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~c~~---~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 162 YNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQTDGS---APQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp CCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECCTTCS---SSEEEEEGGGTHHHHHHHHT
T ss_pred cCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECCCCCC---CCeEEEEhHHhHHHHHHHHh
Confidence 111233433 245689999999995 6799999998864322 25667788888899888764
No 67
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.49 E-value=2.8e-12 Score=116.25 Aligned_cols=181 Identities=15% Similarity=0.182 Sum_probs=111.3
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcCC-
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQG- 160 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~~- 160 (397)
-|-+|.|..... ......|+|.+|+++ ||||+|||+.. .+.|.+.. .+.+..+-+..++.
T Consensus 12 ~Pw~v~l~~~~~-------~~~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y 81 (224)
T 3rp2_A 12 RPYMAHLDIVTE-------KGLRVICGGFLISRQ-FVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHESY 81 (224)
T ss_dssp CTTEEEEEEECT-------TSCEEEEEEEESSSS-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTC
T ss_pred CCcEEEEEEecC-------CCcEEEEEeEEeeCC-EEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECCCc
Confidence 466677764321 111347999999987 99999999854 55565531 23445554555543
Q ss_pred ------CCeEEEEEcCCC---CCcceeecCCCC-CCCCCCeEEEEecCCCC-----CCceeeeEEeeccccccCC-CCCC
Q 015960 161 ------TDLAVLHIDAPN---HKLRSIPVGVSA-NLRIGQKVYAIGHPLGR-----KFTCTAGIISAFGLEPITA-TGPP 224 (397)
Q Consensus 161 ------~DlAlL~v~~~~---~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~-----~~~~~~G~vs~~~~~~~~~-~~~~ 224 (397)
+|||||+++.+- ..+.++.|.... .+..|+.+++.||.... ........+.-+....... ....
T Consensus 82 ~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 161 (224)
T 3rp2_A 82 NSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRYYE 161 (224)
T ss_dssp CSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTCCC
T ss_pred cCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccccC
Confidence 699999998762 345677775433 35789999999997421 1112222222222221111 1111
Q ss_pred cccEEEEc-----cccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 225 IQGLIQID-----AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 225 ~~~~i~~~-----~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
....+... ...|.|+|||||+. ++.++||++++...... .+....+...++|+++.+
T Consensus 162 ~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~---p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 162 YKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHPDAKP---PAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp TTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCTTCCS---CEEEEEHHHHHHHHHHHH
T ss_pred cCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCCCCCC---CcEEEEHHHhHHHHHHHh
Confidence 12234332 35688999999995 67999999998653221 566677778888888764
No 68
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.49 E-value=2.3e-12 Score=118.50 Aligned_cols=173 Identities=16% Similarity=0.185 Sum_probs=108.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCC-eEEEEecC------CcEEEEEEEEEc--------CCCCeEEEEEcCCC---CCc
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGAS-SVKVTLFD------KTTLDAKVVGHD--------QGTDLAVLHIDAPN---HKL 175 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~-~i~V~~~~------g~~~~a~vv~~d--------~~~DlAlL~v~~~~---~~~ 175 (397)
..|+|.+|+++ ||||+|||+.+.. .+.|.+.. ++.+..+-+..+ ..+||||||++.+- ..+
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v 102 (240)
T 2zgc_A 24 HLCGGVLVHPK-WVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTI 102 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSSC
T ss_pred eEEEEEEEcCC-EEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCce
Confidence 57999999987 9999999997653 56776642 234444444333 24699999998762 356
Q ss_pred ceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC---C-CCCcccEEEE-----ccccCCCCc
Q 015960 176 RSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA---T-GPPIQGLIQI-----DAAINRGNS 240 (397)
Q Consensus 176 ~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~---~-~~~~~~~i~~-----~~~i~~G~S 240 (397)
.++.|.... .+..|+.+++.||..... .......+.-+....... . .......+.. ....|.|||
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 182 (240)
T 2zgc_A 103 RPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDS 182 (240)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCT
T ss_pred eeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCCc
Confidence 777776543 357899999999975321 122222222222111111 0 1111233443 235689999
Q ss_pred ccceecCC-ccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 241 GGPLLDSS-GSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 241 GGPlvn~~-G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
||||+..+ ..++||++++...++.....+....+...++|+++..+.
T Consensus 183 GgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 230 (240)
T 2zgc_A 183 GGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGR 230 (240)
T ss_dssp TCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCC
T ss_pred cCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhh
Confidence 99999532 389999998743333223356678888899999887753
No 69
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.49 E-value=1.1e-12 Score=120.48 Aligned_cols=169 Identities=14% Similarity=0.150 Sum_probs=100.6
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC------------------CCCeEE
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ------------------GTDLAV 165 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~------------------~~DlAl 165 (397)
...|+|.+|+++ ||||+|||+.+. +.|++.. ++.+..+-+..++ .+||||
T Consensus 26 ~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIAL 102 (240)
T 1sgf_A 26 KYQCGGVLLDRN-WVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLML 102 (240)
T ss_dssp SCCEEEEECSSS-EEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEE
T ss_pred CeEEEEEEecCC-EEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEE
Confidence 357999999987 999999999753 3444321 2333443333332 369999
Q ss_pred EEEcCCC---CCcceeecCCCCCCCCCCeEEEEecCCCCCC------ceeeeEEeeccccccCC-CCC-CcccEEEEc--
Q 015960 166 LHIDAPN---HKLRSIPVGVSANLRIGQKVYAIGHPLGRKF------TCTAGIISAFGLEPITA-TGP-PIQGLIQID-- 232 (397)
Q Consensus 166 L~v~~~~---~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~------~~~~G~vs~~~~~~~~~-~~~-~~~~~i~~~-- 232 (397)
|+++.+- ..+.++.|... .+..|+.+++.||...... ......+.-+....... ... .....+...
T Consensus 103 l~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 181 (240)
T 1sgf_A 103 LRLSKPADITDVVKPITLPTE-EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEM 181 (240)
T ss_dssp EEESSCCCCCSSCCCCCCCCS-CCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEEC
T ss_pred EEeCCcCcCCCcccccCCCCC-CCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccC
Confidence 9999862 35678888643 4678999999999753211 11112222111111100 000 012233332
Q ss_pred ---cccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 233 ---AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 233 ---~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
...|.|||||||+. +|.++||++++...++.....+....+...++|+++.++
T Consensus 182 ~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 182 DGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp SSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 34799999999995 789999999874433322335667888889999988765
No 70
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.49 E-value=7.6e-12 Score=114.86 Aligned_cols=174 Identities=13% Similarity=0.109 Sum_probs=109.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC--CeEEEEecC-----------CcEEEEEEEEEcC-CCCeEEEEEcCCC---CCc
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA--SSVKVTLFD-----------KTTLDAKVVGHDQ-GTDLAVLHIDAPN---HKL 175 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~--~~i~V~~~~-----------g~~~~a~vv~~d~-~~DlAlL~v~~~~---~~~ 175 (397)
...|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+.+++ .+|||||+++.+- ..+
T Consensus 22 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v 100 (240)
T 1si5_H 22 KHICGGSLIKES-WVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFV 100 (240)
T ss_dssp SEEEEEEEEETT-EEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSC
T ss_pred CeEEEEEEeeCC-EEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCce
Confidence 357999999987 999999999754 467777632 1234433333444 7899999998862 356
Q ss_pred ceeecCCC-CCCCCCCeEEEEecCCCCC----CceeeeEEeeccccccCCC--CC--CcccEEEE-----ccccCCCCcc
Q 015960 176 RSIPVGVS-ANLRIGQKVYAIGHPLGRK----FTCTAGIISAFGLEPITAT--GP--PIQGLIQI-----DAAINRGNSG 241 (397)
Q Consensus 176 ~~~~l~~s-~~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~~~~~~~--~~--~~~~~i~~-----~~~i~~G~SG 241 (397)
.++.|... ..+..|+.+++.||..... .......+.-+........ +. .....+.. ....|.||||
T Consensus 101 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 180 (240)
T 1si5_H 101 STIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYG 180 (240)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTT
T ss_pred eccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCC
Confidence 77777653 2357899999999975432 1222222322222111110 00 11233433 2457899999
Q ss_pred cceecCCc---cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhcc
Q 015960 242 GPLLDSSG---SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFG 288 (397)
Q Consensus 242 GPlvn~~G---~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g 288 (397)
|||+..++ .++||++++... ......+....+...++|+++.++..
T Consensus 181 gPL~~~~~~~~~l~Gi~S~g~~C-~~~~~p~vyt~V~~y~~WI~~~i~~~ 229 (240)
T 1si5_H 181 GPLVCEQHKMRMVLGVIVPGRGC-AIPNRPGIFVRVAYYAKWIHKIILTY 229 (240)
T ss_dssp CEEEEECSSSEEEEEEECSCSCS-SCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred CcEEEEECCcEEEEEEEEECCCC-CCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence 99995432 799999987532 22233567788888999999887643
No 71
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.49 E-value=1.4e-12 Score=118.72 Aligned_cols=166 Identities=13% Similarity=0.113 Sum_probs=105.4
Q ss_pred eeEEEEEcCCCEEEEcccccCCCCeEEEEecC-------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CCcce
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD-------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HKLRS 177 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~-------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~~~~ 177 (397)
.|+|.+|+++ ||||+|||+. ..+.|++.. .+.+..+-+..++ .+|||||+++.+- ..+.+
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~p 101 (224)
T 2qxi_A 25 HCGGVLVNER-WVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKK 101 (224)
T ss_dssp EEEEEEEETT-EEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCC
T ss_pred EEEEEEecCC-EEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceee
Confidence 7999999987 9999999995 456666642 2344444444443 4699999998862 35677
Q ss_pred eecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeecc---ccccCCCCCCcccEEEEc-----cccCCCCcccc
Q 015960 178 IPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFG---LEPITATGPPIQGLIQID-----AAINRGNSGGP 243 (397)
Q Consensus 178 ~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~~-----~~i~~G~SGGP 243 (397)
+.|... ....|+.++++||+.... .......+.-+. +..... .......+... ...|.|+||||
T Consensus 102 icL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~~C~GDSGgP 179 (224)
T 2qxi_A 102 VRLPSR-CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYK-DLLENSMLCAGIPDSKKNACNGDSGGP 179 (224)
T ss_dssp CCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHG-GGCCTTEEEEECTTCCCBCCTTCTTCE
T ss_pred EECCCC-CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhc-CcCCCCeEEecCCCCCCccCCCCcccc
Confidence 788643 357899999999985421 112222222111 111000 00012234332 35789999999
Q ss_pred eecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 244 LLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 244 lvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|+. +|+++||++++....+.....+....+...++|+++.++
T Consensus 180 L~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 221 (224)
T 2qxi_A 180 LVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMK 221 (224)
T ss_dssp EEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred EEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 995 789999999874333322335667788888888888665
No 72
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.48 E-value=5.4e-14 Score=114.13 Aligned_cols=92 Identities=28% Similarity=0.449 Sum_probs=74.0
Q ss_pred cccccccCCCch---hHHHHHHcC---------CCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC
Q 015960 288 GKIIRPYLGIAH---DQLLEKLMG---------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN 355 (397)
Q Consensus 288 g~~~~~~lGi~~---~~~~~~~~~---------~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~ 355 (397)
|++.|+|||+.. ++..++.++ ..|++|..+.++|||+++||++ ||+|++|||+++.+
T Consensus 1 G~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (113)
T 2pzd_A 1 GSHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQN 69 (113)
T ss_dssp ----CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CcccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCC
Confidence 567899999943 333333332 3789999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeeCC
Q 015960 356 ANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEP 393 (397)
Q Consensus 356 ~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 393 (397)
+.++..++.. |+.+.++|.|+|+.+++.+++...+
T Consensus 70 ~~~~~~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~~ 104 (113)
T 2pzd_A 70 AEDVYEAVRT---QSQLAVQIRRGRETLTLYVTPEVTE 104 (113)
T ss_dssp HHHHHHHHHH---CSSEEEEEEETTEEEEEEECCEEC-
T ss_pred HHHHHHHHhC---CCeEEEEEEECCEEEEEEEEEeecc
Confidence 9999998875 6789999999999999998887654
No 73
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.48 E-value=4.6e-12 Score=116.64 Aligned_cols=171 Identities=18% Similarity=0.125 Sum_probs=107.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCC----------------CCeEEEEecC---------CcEEEEEEEEEcCC-------
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEG----------------ASSVKVTLFD---------KTTLDAKVVGHDQG------- 160 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~----------------~~~i~V~~~~---------g~~~~a~vv~~d~~------- 160 (397)
...|+|.+|+++ ||||+|||+.+ ...+.|.+.. .+.+..+-+..++.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 102 (251)
T 3gov_B 24 QPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFE 102 (251)
T ss_dssp CEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTB
T ss_pred CeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCC
Confidence 457999999987 99999999954 2456676542 23444554555553
Q ss_pred CCeEEEEEcCC---CCCcceeecCCCCCCCCCCeEEEEecCCCCCC----ceeeeEEeecc---ccccCCC--CCCcccE
Q 015960 161 TDLAVLHIDAP---NHKLRSIPVGVSANLRIGQKVYAIGHPLGRKF----TCTAGIISAFG---LEPITAT--GPPIQGL 228 (397)
Q Consensus 161 ~DlAlL~v~~~---~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~vs~~~---~~~~~~~--~~~~~~~ 228 (397)
+|||||+++.+ ...+.++.|... ....|+.+++.||...... ......+.-+. +...... .......
T Consensus 103 ~DIAll~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 181 (251)
T 3gov_B 103 NDVALVELLESPVLNAFVMPICLPEG-PQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDM 181 (251)
T ss_dssp TCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTE
T ss_pred CCEEEEEeCCcccCCCceEEeECCCC-CCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCc
Confidence 69999999875 235667777643 3478999999999754221 12222222111 1111100 0111233
Q ss_pred EEE-----ccccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 229 IQI-----DAAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 229 i~~-----~~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
+.. ....|.|+|||||+.. +| .++||++++... +.....+....+...++|+++..+
T Consensus 182 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~~~ 248 (251)
T 3gov_B 182 ICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDC-GKKDRYGVYSYIHHNKDWIQRVTG 248 (251)
T ss_dssp EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSS-SCSSCCEEEEETTTTHHHHHHHHC
T ss_pred EEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCC-CCCCCCEEEEEHHHhHHHHHHHhc
Confidence 444 2457899999999853 34 599999998532 222335677888889999988753
No 74
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.48 E-value=2.2e-12 Score=118.17 Aligned_cols=167 Identities=13% Similarity=0.146 Sum_probs=105.0
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ------------------GTDLAVL 166 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~------------------~~DlAlL 166 (397)
..|+|.+|+++ ||||+|||+.+. +.|.+.. .+.+..+-+..++ .+|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (238)
T 1spj_A 24 FQCGGILVHRQ-WVLTAAHCISDN--YQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLL 100 (238)
T ss_dssp EEEEEEEEETT-EEEECGGGCCSS--EEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEE
T ss_pred eeEEEEEecCC-EEEEcHHhCCCC--ceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEEE
Confidence 47999999987 999999999753 4555421 2334444333333 3599999
Q ss_pred EEcCCC----CCcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCCCCcccEEEE--
Q 015960 167 HIDAPN----HKLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATGPPIQGLIQI-- 231 (397)
Q Consensus 167 ~v~~~~----~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~-- 231 (397)
+++.+- ..++++.|.. .....|+.+++.||..... .......+.-+.... ... .......+..
T Consensus 101 ~L~~~~~~~~~~v~pi~L~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~ 178 (238)
T 1spj_A 101 RLTEPADTITDAVKVVELPT-EEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHV-QKVTDFMLCVGH 178 (238)
T ss_dssp EESSCCCCSSTTCCCCCCCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCS-SCCCTTEEEEEC
T ss_pred EECccccccCCceeeccCCC-CCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhcc-CCCCCCeEEeeC
Confidence 998763 2467777764 3457899999999975321 122222222221111 110 0011233433
Q ss_pred ---ccccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 ---DAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 ---~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+. +|.++||++++...++.....+....+...++|+++.++
T Consensus 179 ~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 235 (238)
T 1spj_A 179 LEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIA 235 (238)
T ss_dssp TTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 246789999999995 689999999985433323335667788888899888765
No 75
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.48 E-value=1.2e-12 Score=119.31 Aligned_cols=171 Identities=14% Similarity=0.147 Sum_probs=109.4
Q ss_pred CceeEEEEEcCCCEEEEcccccCC--CCeEEEEecC------CcEEEEEEEEEc------CCCCeEEEEEcCCC---C-C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEG--ASSVKVTLFD------KTTLDAKVVGHD------QGTDLAVLHIDAPN---H-K 174 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~--~~~i~V~~~~------g~~~~a~vv~~d------~~~DlAlL~v~~~~---~-~ 174 (397)
...|+|.+|+++ ||||+|||+.+ ...+.|.+.. ++.+..+-+..+ ..+|||||+++.+- . .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~ 101 (235)
T 3h7t_A 23 KPFCGGSILTAN-FVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKT 101 (235)
T ss_dssp SCCEEEEESSSS-EEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred CceEeEEEeeCC-EEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCcc
Confidence 347999999987 99999999964 3567777642 234444333322 24799999999763 2 5
Q ss_pred cceeecCCCC-CCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCC----CCcccEEEE-----cccc
Q 015960 175 LRSIPVGVSA-NLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATG----PPIQGLIQI-----DAAI 235 (397)
Q Consensus 175 ~~~~~l~~s~-~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~----~~~~~~i~~-----~~~i 235 (397)
+.++.|.... .+..|+.+++.||+.... .......+.-+.... ..... ......+.. ....
T Consensus 102 v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~ 181 (235)
T 3h7t_A 102 TKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYI 181 (235)
T ss_dssp CCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBC
T ss_pred ccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCcc
Confidence 6677776433 268899999999975321 122222222221111 00000 011233443 3467
Q ss_pred CCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 236 NRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 236 ~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
|.|+|||||+. +|+++||++++.. ... ...+....+....+|+++.++.
T Consensus 182 C~GDsGgPl~~-~~~l~Gi~S~g~~-C~~-~~p~vyt~v~~~~~WI~~~i~~ 230 (235)
T 3h7t_A 182 GYGDAGDPAVQ-NGTLVGVASYISS-MPS-EFPSVFLRVGYYVLDIKDIISG 230 (235)
T ss_dssp CTTCTTCEEEE-TTEEEEEECCCTT-CCT-TSCEEEEEGGGGHHHHHHHHTT
T ss_pred ccCCCCCceee-CCeEEEEEEecCC-CCC-CCCceEEEHHHHHHHHHHHHhC
Confidence 89999999995 7889999999754 222 3456778888899999987764
No 76
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.47 E-value=4.7e-12 Score=115.85 Aligned_cols=171 Identities=13% Similarity=0.113 Sum_probs=106.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCC----CCeEEEEecC-----------CcEEEEEEEEEcC-CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEG----ASSVKVTLFD-----------KTTLDAKVVGHDQ-GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~----~~~i~V~~~~-----------g~~~~a~vv~~d~-~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||+|||+.+ ...+.|++.. .+.+..+-+..++ .+|||||+++.+- .
T Consensus 21 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~ 99 (234)
T 2asu_B 21 QHFCGGSLVKEQ-WILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQ 99 (234)
T ss_dssp CEEEEEEEEETT-EEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSS
T ss_pred CEEEEEEEEeCC-EEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCC
Confidence 457999999987 99999999964 3456666532 1234444344444 6899999999862 3
Q ss_pred CcceeecCCCC-CCCCCCeEEEEecCCCCC----CceeeeEEeecc---ccccCCCCCCcccEEEE-----ccccCCCCc
Q 015960 174 KLRSIPVGVSA-NLRIGQKVYAIGHPLGRK----FTCTAGIISAFG---LEPITATGPPIQGLIQI-----DAAINRGNS 240 (397)
Q Consensus 174 ~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~-----~~~i~~G~S 240 (397)
.+.++.|.... .+..|+.+++.||..... .......+.-+. +.... ........+.. ....|.|+|
T Consensus 100 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDS 178 (234)
T 2asu_B 100 RVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKH-RGRVRESEMCTEGLLAPVGACEGDY 178 (234)
T ss_dssp SSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHT-TTCCCTTEEEECCCSSCCBCCTTCT
T ss_pred cEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHccccc-CCccCcceEeecCCCCCCeeccCCC
Confidence 56777776443 356899999999975422 122222222221 11111 01111233443 235789999
Q ss_pred ccceecCC-c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 241 GGPLLDSS-G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 241 GGPlvn~~-G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||+... | .++||++++.... .....+....+...++|+++..+
T Consensus 179 GgPL~~~~~~~~~l~Gi~S~g~~C~-~~~~p~vyt~V~~~~~WI~~~~~ 226 (234)
T 2asu_B 179 GGPLACFTHNSWVLEGIIIPNRVCA-RSRWPAVFTRVSVFVDWIHKVMR 226 (234)
T ss_dssp TCEEEEEETTEEEEEEEECCCSSSS-CTTCCEEEEEGGGSHHHHHHHC-
T ss_pred CCceEEEECCeEEEEEEEEcCCCCC-CCCCCeEEEEHHHHHHHHHHHhh
Confidence 99999543 3 7999999875332 22335667788888888888654
No 77
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.47 E-value=2.4e-12 Score=117.39 Aligned_cols=172 Identities=17% Similarity=0.105 Sum_probs=106.3
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecCC------cEEEEEEEEEcC-------CCCeEEEEEcCC---CCCcc
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDK------TTLDAKVVGHDQ-------GTDLAVLHIDAP---NHKLR 176 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g------~~~~a~vv~~d~-------~~DlAlL~v~~~---~~~~~ 176 (397)
...|+|.+|+++ ||||+|||+.+...+.|.+... ..+..+-+..++ .+|||||+++ + ...+.
T Consensus 27 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~ 104 (230)
T 2hlc_A 27 RVWCGGSLIDNK-WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIP-HVEYTDNIQ 104 (230)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECS-CCCCCSSCC
T ss_pred CEEEEEEEeeCC-EEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEec-CCCcCCcEe
Confidence 357999999987 9999999998877777777431 233333333443 4799999998 4 23567
Q ss_pred eeecCCCC---CCCCCCeEEEEecCCCCCC--ceeeeEEeecc---ccccCCCCCCcccEEEEc----cccCCCCcccce
Q 015960 177 SIPVGVSA---NLRIGQKVYAIGHPLGRKF--TCTAGIISAFG---LEPITATGPPIQGLIQID----AAINRGNSGGPL 244 (397)
Q Consensus 177 ~~~l~~s~---~~~~G~~V~~iG~p~g~~~--~~~~G~vs~~~---~~~~~~~~~~~~~~i~~~----~~i~~G~SGGPl 244 (397)
++.|.... ....|+.+.+.||...... ......+.-+. +.............+... ...|.|+|||||
T Consensus 105 picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl 184 (230)
T 2hlc_A 105 PIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPF 184 (230)
T ss_dssp CCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEE
T ss_pred eeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCee
Confidence 77776443 2457899999999864321 22222222111 111111101112334332 357899999999
Q ss_pred ecC-CccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 245 LDS-SGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 245 vn~-~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
+.. ++.++||++++....-.....+....+....+|+++..+
T Consensus 185 ~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~~ 227 (230)
T 2hlc_A 185 VLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNTG 227 (230)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHHC
T ss_pred EECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhhC
Confidence 943 458999999875211112234556778888888887653
No 78
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.46 E-value=7.5e-12 Score=114.67 Aligned_cols=169 Identities=14% Similarity=0.154 Sum_probs=105.6
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC--------CeEEEEec----------CCcEEEEEEEEEcC-------CCCeEEEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA--------SSVKVTLF----------DKTTLDAKVVGHDQ-------GTDLAVLHI 168 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~--------~~i~V~~~----------~g~~~~a~vv~~d~-------~~DlAlL~v 168 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+. ..+.+..+-+..++ .+|||||++
T Consensus 25 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L 103 (241)
T 3ncl_A 25 HICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLEL 103 (241)
T ss_dssp EEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred eEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 47999999987 999999999643 34566653 12445555555554 579999999
Q ss_pred cCCC---CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccc---cCCCCCCcccEEEE-----
Q 015960 169 DAPN---HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEP---ITATGPPIQGLIQI----- 231 (397)
Q Consensus 169 ~~~~---~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~----- 231 (397)
+.+- ..+.++.|.... .+..|+.+++.||..... .......+.-+.... ... .......+..
T Consensus 104 ~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~ 182 (241)
T 3ncl_A 104 EKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLP-QQITPRMMCVGFLSG 182 (241)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHST-TTCCTTEEEEECTTC
T ss_pred CCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcc-cCCCCCeEEeCCCCC
Confidence 8862 356777775433 356899999999975321 112222222222111 110 0111223433
Q ss_pred ccccCCCCccccee--cCCcc--EEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 232 DAAINRGNSGGPLL--DSSGS--LIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 232 ~~~i~~G~SGGPlv--n~~G~--vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
....|.|+|||||+ +.+|+ ++||++++... ......+....+...++|+++..
T Consensus 183 ~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c-~~~~~p~vyt~v~~y~~WI~~~~ 239 (241)
T 3ncl_A 183 GVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGC-AQRNKPGVYTRLPLFRDWIKENT 239 (241)
T ss_dssp SSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSS-SCTTCCEEEEESGGGHHHHHHHH
T ss_pred CCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCC-CCCCCCeEEEEHHHHHHHHHHHh
Confidence 24578999999998 34565 89999998543 22233566778888888888754
No 79
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.46 E-value=4.4e-12 Score=117.20 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=107.8
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||||||+.+...+.|++.. ...+..+-+..++ .+|||||+++.+- .
T Consensus 24 ~~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (250)
T 1aut_C 24 KLACGAVLIHPS-WVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQ 102 (250)
T ss_dssp CEEEEEEEEETT-EEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred ceEEEEEEeeCC-EEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCC
Confidence 357999999987 999999999887777777642 2344444444454 3699999999862 2
Q ss_pred CcceeecCCCC-----CCCCCCeEEEEecCCCCCC----------ceeeeEE---eeccccccCCCCCCcccEEEE----
Q 015960 174 KLRSIPVGVSA-----NLRIGQKVYAIGHPLGRKF----------TCTAGII---SAFGLEPITATGPPIQGLIQI---- 231 (397)
Q Consensus 174 ~~~~~~l~~s~-----~~~~G~~V~~iG~p~g~~~----------~~~~G~v---s~~~~~~~~~~~~~~~~~i~~---- 231 (397)
.+.++.|.... ....|+.+++.||+..... ......+ +...+..... .......+..
T Consensus 103 ~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~~~~~~Cag~~~ 181 (250)
T 1aut_C 103 TIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMS-NMVSENMLCAGILG 181 (250)
T ss_dssp TBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCS-SCCCTTEEEECCTT
T ss_pred ceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhc-cCCCCCEEEeCCCC
Confidence 45677775322 1357999999999853211 1112222 2111111110 0111233443
Q ss_pred -ccccCCCCcccceecC-Ccc--EEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 232 -DAAINRGNSGGPLLDS-SGS--LIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 232 -~~~i~~G~SGGPlvn~-~G~--vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
....|.|||||||+.. +|+ ++||++++... +.....+....+...++|+++.++.
T Consensus 182 ~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C-~~~~~p~vyt~V~~y~~WI~~~~~~ 240 (250)
T 1aut_C 182 DRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGC-GLLHNYGVYTKVSRYLDWIHGHIRD 240 (250)
T ss_dssp CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSS-SCTTCCEEEECGGGTHHHHHHHHC-
T ss_pred CCCCCCCCCCchheEEEECCeEEEEEEEEECCCC-CCCCCCEEEEEHHHHHHHHHHHhhc
Confidence 2357999999999953 554 99999987542 2223356677888888998887653
No 80
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.46 E-value=1.8e-12 Score=118.96 Aligned_cols=170 Identities=14% Similarity=0.184 Sum_probs=105.4
Q ss_pred ceeEEEEEcCCCEEEEcccccCC--CCeEEEEec--------CCcEEEEEEEEEcCC---------CCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG--ASSVKVTLF--------DKTTLDAKVVGHDQG---------TDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~--~~~i~V~~~--------~g~~~~a~vv~~d~~---------~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||+|||+.+ ...+.|.+. +.+.+..+-+..++. +|||||+++.+-
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (241)
T 1m9u_A 27 HSCGASLLSST-SALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISL 105 (241)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCC
T ss_pred eeeEEEEEeCC-EEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCcccc
Confidence 47999999987 99999999976 456777763 134555555555544 499999999862
Q ss_pred -CCcceeecCCC-CCCCCCCeEEEEecCCCCC-----CceeeeEEeecccccc---CCC-CC--CcccEEEEc-----cc
Q 015960 173 -HKLRSIPVGVS-ANLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPI---TAT-GP--PIQGLIQID-----AA 234 (397)
Q Consensus 173 -~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~---~~~-~~--~~~~~i~~~-----~~ 234 (397)
..+.++.|... .....|+.+++.||..... .......+.-+..... ... .. .....+... ..
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 185 (241)
T 1m9u_A 106 GGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTG 185 (241)
T ss_dssp CSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCB
T ss_pred CCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCe
Confidence 35677777654 3233899999999975321 1222222322221110 000 00 112344432 35
Q ss_pred cCCCCcccceecCCc--cEEEEEeeeec---cCCCccCceeeEeccchhHHHHHH
Q 015960 235 INRGNSGGPLLDSSG--SLIGVNTSIIT---RTDAFCGMACSIPIDTVSGIVDQL 284 (397)
Q Consensus 235 i~~G~SGGPlvn~~G--~vVGI~s~~~~---~~~~~~~~~~aip~~~i~~~~~~l 284 (397)
.|.|||||||+..+| .++||+++... .+......+....+....+|+++.
T Consensus 186 ~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~~ 240 (241)
T 1m9u_A 186 ACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDN 240 (241)
T ss_dssp CCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHHH
T ss_pred eecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhhh
Confidence 789999999996435 79999998322 122123356667777788887753
No 81
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.46 E-value=8.3e-14 Score=112.87 Aligned_cols=93 Identities=23% Similarity=0.364 Sum_probs=77.7
Q ss_pred cccccccCCCch---hHHHHHHcC---------CCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC
Q 015960 288 GKIIRPYLGIAH---DQLLEKLMG---------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN 355 (397)
Q Consensus 288 g~~~~~~lGi~~---~~~~~~~~~---------~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~ 355 (397)
|++.|+|||+.. ++..++.++ ..|++|..+.++|||+++||++ ||+|++|||+++.+
T Consensus 1 G~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (112)
T 2p3w_A 1 GSHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQD-----------GDIIVKVNGRPLVD 69 (112)
T ss_dssp CCCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CCcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCC
Confidence 578899999933 333433332 3689999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeeCCC
Q 015960 356 ANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVEPD 394 (397)
Q Consensus 356 ~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~ 394 (397)
+.++..++. +|+++.++|.|+|+.+++.+++...+.
T Consensus 70 ~~~~~~~l~---~g~~v~l~v~R~g~~~~~~v~~~~~~~ 105 (112)
T 2p3w_A 70 SSELQEAVL---TESPLLLEVRRGNDDLLFSIAPEVVMG 105 (112)
T ss_dssp HHHHHHHHH---HCSSEEEEEEETTEEEEEEECCEEECT
T ss_pred HHHHHHHHh---CCCeEEEEEEECCEEEEEEEEEeeeCC
Confidence 999999883 478899999999999999988876653
No 82
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.45 E-value=5.3e-12 Score=114.51 Aligned_cols=168 Identities=13% Similarity=0.162 Sum_probs=103.4
Q ss_pred eeEEEEEcCCCEEEEcccccCCC---CeEEEEecC-------CcEEEEEEEEEcC-------CCCeEEEEEcCCCCCcce
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD-------KTTLDAKVVGHDQ-------GTDLAVLHIDAPNHKLRS 177 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~-------g~~~~a~vv~~d~-------~~DlAlL~v~~~~~~~~~ 177 (397)
.|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+- .+++
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v-~~~~ 98 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI-NQPT 98 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC-CSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC-CCCc
Confidence 5999999987 999999999754 346666531 2345544444454 3599999999874 5677
Q ss_pred eecCCCCCCCCCCeEEEEecCCCCC-----CceeeeEEeecc---ccccCCCCCCcccEEEE-----ccccCCCCcccce
Q 015960 178 IPVGVSANLRIGQKVYAIGHPLGRK-----FTCTAGIISAFG---LEPITATGPPIQGLIQI-----DAAINRGNSGGPL 244 (397)
Q Consensus 178 ~~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~-----~~~i~~G~SGGPl 244 (397)
+++.... ...+..+.+.||..... .......+.-+. +.............+.. ....|.|+|||||
T Consensus 99 i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl 177 (224)
T 3beu_A 99 LKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPM 177 (224)
T ss_dssp CEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEE
T ss_pred ccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCee
Confidence 7776433 34566899999975422 122222222221 11111101111234443 2357899999999
Q ss_pred ecCC--c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 245 LDSS--G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 245 vn~~--G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
+..+ | .++||++++... ......+....+....+|+++..+
T Consensus 178 ~~~~~~~~~~l~Gi~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 178 FRKDNADEWVQVGIVSWGEGC-ARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp EEECTTSCEEEEEEEEEESSS-SCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred EEecCCCCEEEEEEeccCCCC-CCCCCCeEEEEHHHHHHHHHHHHh
Confidence 9543 3 689999998542 222335666777778888877654
No 83
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.45 E-value=2.6e-12 Score=117.70 Aligned_cols=170 Identities=17% Similarity=0.148 Sum_probs=106.3
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC--CeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA--SSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN--- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~--~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~--- 172 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 26 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~ 104 (238)
T 1ym0_A 26 HFCGGSIINDR-WVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFD 104 (238)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCS
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCcccc
Confidence 47999999987 999999999764 557777642 2344554444443 4699999998762
Q ss_pred CCcceeecCCCCCCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCCCCcccEEEEc-------cccC
Q 015960 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATGPPIQGLIQID-------AAIN 236 (397)
Q Consensus 173 ~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~~-------~~i~ 236 (397)
..+.++.|........++.+.+.||..... .......+.-+.... ...........+... ...|
T Consensus 105 ~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C 184 (238)
T 1ym0_A 105 INVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSC 184 (238)
T ss_dssp SSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBCC
T ss_pred CcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCccC
Confidence 356777776544333889999999975321 122222222221111 110001112334331 4679
Q ss_pred CCCcccceecC--Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 237 RGNSGGPLLDS--SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 237 ~G~SGGPlvn~--~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
.|+|||||+.. +| .|+||++++.... ....+....+...++|+++.++
T Consensus 185 ~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~--~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 185 QGDSGGPLSVKDGSGIFSLVGIVSWGIGCA--SGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp TTTTTCEEEEECTTCCEEEEEEEEECSSSS--SSSCEEEEEHHHHHHHHHHHHH
T ss_pred CCccCCeeEEECCCCCEEEEEEEeECCCCC--CCCCcEEEEHHHhHHHHHHHhc
Confidence 99999999854 34 6999999985422 2334666777778888877654
No 84
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.45 E-value=2.1e-12 Score=117.31 Aligned_cols=169 Identities=14% Similarity=0.181 Sum_probs=105.1
Q ss_pred eeEEEEEcCCCEEEEcccccCC--CCeEEEEecC--------CcEEEEEEEEEc------CCCCeEEEEEcCCC---C-C
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEG--ASSVKVTLFD--------KTTLDAKVVGHD------QGTDLAVLHIDAPN---H-K 174 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~--~~~i~V~~~~--------g~~~~a~vv~~d------~~~DlAlL~v~~~~---~-~ 174 (397)
.|+|.+|+++ ||||+|||+.+ ...+.|.+.. +..+..+-+..+ ..+|||||+++.+- . .
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~ 105 (228)
T 3h7o_A 27 TCGGAILSQW-FVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLK 105 (228)
T ss_dssp EEEEEESSSS-EEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred EeeeEEeeCC-EEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCcccccccc
Confidence 7999999987 99999999953 3456666532 112222222222 24799999998863 2 5
Q ss_pred cceeecCCCCC-CCCCCeEEEEecCCCCCC-----ceeeeEEeecc---ccccCCCCCCcccEEEEc---cccCCCCccc
Q 015960 175 LRSIPVGVSAN-LRIGQKVYAIGHPLGRKF-----TCTAGIISAFG---LEPITATGPPIQGLIQID---AAINRGNSGG 242 (397)
Q Consensus 175 ~~~~~l~~s~~-~~~G~~V~~iG~p~g~~~-----~~~~G~vs~~~---~~~~~~~~~~~~~~i~~~---~~i~~G~SGG 242 (397)
+.++.|..... +..|+.+++.||...... ......+.-+. +.............+... ...|.|+|||
T Consensus 106 v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGg 185 (228)
T 3h7o_A 106 SKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGD 185 (228)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTC
T ss_pred cccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCC
Confidence 67777765432 678999999999754321 12222222221 111110000112233332 4578999999
Q ss_pred ceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 243 PLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 243 Plvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
||+. +++++||++++..... ...+....+...++|+++.++.
T Consensus 186 Pl~~-~~~l~Gi~S~g~~c~~--~~p~vyt~v~~~~~WI~~~i~~ 227 (228)
T 3h7o_A 186 PTVQ-QDTLVGVAAYFPKRPE--GAPEVFTKVGSYVSWIQDIIKK 227 (228)
T ss_dssp EEEE-TTEEEEEECCCTTCCT--TCCEEEEEGGGTHHHHHHHHTT
T ss_pred ccee-cCeEEEEEeecCcCCC--CCCcEEEEHHHHHHHHHHHhhc
Confidence 9995 7789999998754221 3456778888899999887653
No 85
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.45 E-value=4.4e-12 Score=116.11 Aligned_cols=172 Identities=14% Similarity=0.134 Sum_probs=107.4
Q ss_pred ceeEEEEEcCCCEEEEcccccCC----CCeEEEEecCC-------cEEEEEEEEEcC--------CCCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG----ASSVKVTLFDK-------TTLDAKVVGHDQ--------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~----~~~i~V~~~~g-------~~~~a~vv~~d~--------~~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||+|||+.+ ...+.|.+... ..+..+-+..++ .+|||||+++.+-
T Consensus 22 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~ 100 (242)
T 3tvj_B 22 TTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI 100 (242)
T ss_dssp EEEEEEEETTT-EEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEESSCCCC
T ss_pred CcEEEEEecCC-EEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEECCcccc
Confidence 47999999987 99999999953 45567766421 334444344443 4699999999762
Q ss_pred -CCcceeecCCCCC---CCCCCeEEEEecCCCCC----CceeeeEEeecccccc---C-C----CCCCcccEEEE-----
Q 015960 173 -HKLRSIPVGVSAN---LRIGQKVYAIGHPLGRK----FTCTAGIISAFGLEPI---T-A----TGPPIQGLIQI----- 231 (397)
Q Consensus 173 -~~~~~~~l~~s~~---~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~~~~---~-~----~~~~~~~~i~~----- 231 (397)
..+.++.|..... +..|+.+.+.||..... .......+.-+..... . . ........+..
T Consensus 101 ~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~~ 180 (242)
T 3tvj_B 101 NSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESG 180 (242)
T ss_dssp BTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTTC
T ss_pred CCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCCC
Confidence 3577888865442 67899999999975432 1222222222211110 0 0 00011234444
Q ss_pred ccccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 DAAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 ~~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|+|||||+.. +| .++||++++...++.....+....+...++|+++.++
T Consensus 181 ~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 240 (242)
T 3tvj_B 181 GKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 240 (242)
T ss_dssp CSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 2467899999999852 33 3999999984444333335667888888888888654
No 86
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.44 E-value=1.2e-11 Score=114.02 Aligned_cols=173 Identities=14% Similarity=0.156 Sum_probs=108.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEc--------CCCCeEEEEEcCC-
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHD--------QGTDLAVLHIDAP- 171 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d--------~~~DlAlL~v~~~- 171 (397)
...|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..+ ..+|||||+++.+
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~ 100 (248)
T 2r0l_A 22 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 100 (248)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSS
T ss_pred CceEEEEEEcCC-EEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCcc
Confidence 357999999987 999999999764 457777642 234444433333 2469999999875
Q ss_pred ------CCCcceeecCCC-CCCCCCCeEEEEecCCCCC------CceeeeEEeeccccccCC---CCC-CcccEEEE---
Q 015960 172 ------NHKLRSIPVGVS-ANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPITA---TGP-PIQGLIQI--- 231 (397)
Q Consensus 172 ------~~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~--- 231 (397)
...+.++.|... ..+..|+.+++.||..... .......+.-+....... .+. .....+..
T Consensus 101 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 180 (248)
T 2r0l_A 101 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 180 (248)
T ss_dssp SCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCC
Confidence 134677777643 3456899999999975321 122333333222221111 010 01234444
Q ss_pred --ccccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 232 --DAAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 232 --~~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
....|.|+|||||+.. +| .++||++++... +.....+....+....+|+++.++.
T Consensus 181 ~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~~~~ 240 (248)
T 2r0l_A 181 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGC-GRLHKPGVYTRVANYVDWINDRIRP 240 (248)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTT-TCTTCCEEEEEGGGGHHHHHHHHC-
T ss_pred CCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCC-CCCCCCcEEEEHHHHHHHHHHHhcC
Confidence 2357899999999954 45 599999998532 2223356778888889999887653
No 87
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.44 E-value=4.7e-12 Score=115.34 Aligned_cols=166 Identities=17% Similarity=0.133 Sum_probs=103.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---CC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HK 174 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~ 174 (397)
..|+|.+|+++ ||||+|||+.+ .+.|++.. .+.+..+-+..++ .+|||||+++.+- ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1euf_A 27 HICGGFLVRED-FVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDK 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred eEEEEEEeeCC-EEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCc
Confidence 47999999987 99999999975 45565531 2344444444444 4699999998762 35
Q ss_pred cceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC-C-CCCcccEEEEc-----cccCCCCcc
Q 015960 175 LRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA-T-GPPIQGLIQID-----AAINRGNSG 241 (397)
Q Consensus 175 ~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~-~-~~~~~~~i~~~-----~~i~~G~SG 241 (397)
+.++.|.... .+..|+.+.+.||..... .......+.-+....... . .......+... ...+.||||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsG 183 (227)
T 1euf_A 104 VSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSG 183 (227)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCCC
Confidence 6777776443 357899999999975321 122222232222111100 0 01112334432 234589999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|||+. +|.++||++++.. .....+....+...++|+++.++
T Consensus 184 gPL~~-~~~l~Gi~S~gc~---~~~~p~vyt~V~~y~~WI~~~~~ 224 (227)
T 1euf_A 184 GPLVC-NGVAQGIVSYGRN---DGTTPDVYTRISSFLSWIHSTMR 224 (227)
T ss_dssp CEEEE-TTEEEEEEEECCT---TCCSCEEEEEGGGTHHHHHHHTC
T ss_pred CceEE-CCEEEEEEEEeCC---CCCCCeEEEEHHHhHHHHHHHHh
Confidence 99995 7899999998721 12234666778888888887654
No 88
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.44 E-value=7.7e-12 Score=115.65 Aligned_cols=187 Identities=13% Similarity=0.161 Sum_probs=114.5
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecC----------CcEEEEEEEEEcC-
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD----------KTTLDAKVVGHDQ- 159 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~----------g~~~~a~vv~~d~- 159 (397)
-|-.|.|..... ......|+|.+|+++ ||||+|||+.+...+.|.+.. ...+..+-+..++
T Consensus 25 ~Pw~v~l~~~~~-------~~~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~ 96 (251)
T 1pyt_D 25 WPWQISLQYLRD-------NTWRHTCGGTLITPN-HVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEK 96 (251)
T ss_dssp STTEEEEEEEET-------TEEEEEEEEEEEETT-EEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTT
T ss_pred CCceEEEEEEcC-------CCcceEEEeEEecCC-EEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCC
Confidence 466677753211 112347999999987 999999999987778887642 1234444444443
Q ss_pred ------CCCeEEEEEcCCC---CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC---C
Q 015960 160 ------GTDLAVLHIDAPN---HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA---T 221 (397)
Q Consensus 160 ------~~DlAlL~v~~~~---~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~---~ 221 (397)
.+|||||+++.+- ..+.++.|.... .+..|..+++.||..... .......+.-+....... .
T Consensus 97 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 176 (251)
T 1pyt_D 97 WNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWW 176 (251)
T ss_dssp CBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTT
T ss_pred CCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhcc
Confidence 4699999998762 356777776443 356789999999975321 122222222222111110 0
Q ss_pred CC-CcccEEEEc----cccCCCCcccceecC-Cc--cEEEEEeeeec-cCCCccCceeeEeccchhHHHHHHH
Q 015960 222 GP-PIQGLIQID----AAINRGNSGGPLLDS-SG--SLIGVNTSIIT-RTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 222 ~~-~~~~~i~~~----~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~-~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
+. .....+... ...|.|||||||+.. +| .++||++++.. ..+.....+....+....+|+++.+
T Consensus 177 ~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 249 (251)
T 1pyt_D 177 GTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249 (251)
T ss_dssp TTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred CCCcCCCeEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 11 112344432 357899999999953 45 69999999852 2322233466677888888888754
No 89
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.44 E-value=6.7e-12 Score=115.02 Aligned_cols=167 Identities=13% Similarity=0.111 Sum_probs=103.8
Q ss_pred eeEEEEEcCCCEEEEcccccCCC-----CeEEEEecC-------C--cEEEEEEEEEcC-------CCCeEEEEEcCCC-
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGA-----SSVKVTLFD-------K--TTLDAKVVGHDQ-------GTDLAVLHIDAPN- 172 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~-----~~i~V~~~~-------g--~~~~a~vv~~d~-------~~DlAlL~v~~~~- 172 (397)
.|+|.+|+++ ||||+|||+.+. ..+.|.+.. + +.+..+-+..++ .+|||||+++.+-
T Consensus 29 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 107 (237)
T 2f91_A 29 FCGASIYNEN-YAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLT 107 (237)
T ss_dssp EEEEEEEETT-EEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC
T ss_pred eEEEEEeeCC-EEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCcc
Confidence 4999999987 999999999643 457777632 2 344554444454 4699999999862
Q ss_pred --CCcceeecCCCCCCCCCCeEEEEecCCCCC-----CceeeeEEeecc---ccccCCCCCCcccEEEE-----ccccCC
Q 015960 173 --HKLRSIPVGVSANLRIGQKVYAIGHPLGRK-----FTCTAGIISAFG---LEPITATGPPIQGLIQI-----DAAINR 237 (397)
Q Consensus 173 --~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~-----~~~i~~ 237 (397)
..+.++.|.... ...++.+++.||..... .......+.-+. +.............+.. ....|.
T Consensus 108 ~~~~v~picLp~~~-~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 186 (237)
T 2f91_A 108 FNDNVAPIALPEQG-HTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186 (237)
T ss_dssp CBTTBCCCBCCCTT-CCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCT
T ss_pred cCCceeeccCCCCC-CCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCC
Confidence 356788886433 46889999999975321 122222222221 11111001111233443 235789
Q ss_pred CCcccceecCCc---cEEEEEeeeeccCCCccCceeeEeccchhHHHHHH
Q 015960 238 GNSGGPLLDSSG---SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQL 284 (397)
Q Consensus 238 G~SGGPlvn~~G---~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l 284 (397)
|+|||||+..++ .++||++++... ......+....+...++|+++.
T Consensus 187 GDSGgPL~~~~~~~~~l~Gi~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 187 GDSGGPLAASDTGSTYLAGIVSWGYGC-ARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp TCTTCEEEECTTSSCEEEEEEEEESSS-SCTTCCEEEEEGGGSHHHHHHH
T ss_pred CcCCCCeEEecCCCEEEEEEEEecCCC-CCCCCCcEEEEHHHhHHHHHHh
Confidence 999999995432 699999998542 2222345667777788888764
No 90
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.44 E-value=1.3e-11 Score=112.72 Aligned_cols=170 Identities=10% Similarity=0.130 Sum_probs=105.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEec-----CCcEEEEEEEEEcC-------CCCeEEEEEcCCC---CCc
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLF-----DKTTLDAKVVGHDQ-------GTDLAVLHIDAPN---HKL 175 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~-----~g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~~~ 175 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+. ++..+..+-+..++ .+|||||+++.+- ..+
T Consensus 24 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 102 (232)
T 2oq5_A 24 HRCGATLINAT-WLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAV 102 (232)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSSS
T ss_pred eeEEEEEEcCC-EEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCce
Confidence 47999999987 999999999753 35666653 23344444444443 4699999999862 356
Q ss_pred ceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccC---CCC-CCcccEEEEc-----cccCCCCc
Q 015960 176 RSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPIT---ATG-PPIQGLIQID-----AAINRGNS 240 (397)
Q Consensus 176 ~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~---~~~-~~~~~~i~~~-----~~i~~G~S 240 (397)
.++.|.... .+..|+.+++.||..... .......+.-+...... ... ......+... ...|.|||
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 182 (232)
T 2oq5_A 103 HRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDS 182 (232)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCT
T ss_pred eEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCC
Confidence 777776433 356799999999975321 12222233222211111 011 1112344432 35789999
Q ss_pred ccceecCC--c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 241 GGPLLDSS--G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 241 GGPlvn~~--G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
||||+..+ | .++||++++.. +......+....+...++|+++..
T Consensus 183 GgPL~~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~ 230 (232)
T 2oq5_A 183 GGPLVSSDARDIWYLAGIVSWGDE-CAKPNKPGVYTRVTALRDWITSKT 230 (232)
T ss_dssp TCEEEEECTTSCEEEEEEEEECSS-SSBTTBCEEEEETGGGHHHHHHHH
T ss_pred CCcEEEECCCCCEEEEEEEEeCCC-CCCCCCCeEEEEhHHhHHHHHHHh
Confidence 99999533 3 59999998753 222223466677888888887754
No 91
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.43 E-value=5.4e-12 Score=115.86 Aligned_cols=171 Identities=14% Similarity=0.129 Sum_probs=106.2
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+-
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (241)
T 2any_A 27 HLCGGSLIGHQ-WVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEY 105 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCCC
T ss_pred eEEEEEEecCC-EEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCcccC
Confidence 47999999987 999999999754 345665531 2233444444443 4699999998762
Q ss_pred -CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeecc---ccccCCCCCCcccEEEE-----ccccCC
Q 015960 173 -HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFG---LEPITATGPPIQGLIQI-----DAAINR 237 (397)
Q Consensus 173 -~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~-----~~~i~~ 237 (397)
..+.++.|.... ....|+.+++.||..... .......+.-+. +.............+.. ....|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (241)
T 2any_A 106 TEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACK 185 (241)
T ss_dssp BTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCCT
T ss_pred CCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccCC
Confidence 346677776433 357799999999985321 112222222221 11111100011233443 235789
Q ss_pred CCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 238 GNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 238 G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|+|||||+.. +| .|+||++++.... .....+....+...++|+++..+
T Consensus 186 GDsGgPl~~~~~~~~~l~GI~S~g~~c~-~~~~p~vyt~V~~~~~WI~~~~~ 236 (241)
T 2any_A 186 GDSGGPLVCKHNGMWRLVGITSWGEGCA-RREQPGVYTKVAEYMDWILEKTQ 236 (241)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSSSS-CTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCCcEEEEECCEEEEEEEEEecCCCC-CCCCCeEEEEHHHhHHHHHHHhh
Confidence 9999999954 44 5999999875422 22335667788888999988765
No 92
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.43 E-value=1.7e-11 Score=112.99 Aligned_cols=172 Identities=14% Similarity=0.146 Sum_probs=106.0
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC-CCCeEEEEEcCCC---CCcc
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ-GTDLAVLHIDAPN---HKLR 176 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~-~~DlAlL~v~~~~---~~~~ 176 (397)
...|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+...-+..++ .+|||||+++.+- ..+.
T Consensus 41 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~ 119 (247)
T 1ddj_A 41 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 119 (247)
T ss_dssp CEEEEEEEEETT-EEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEeeCC-EEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEE
Confidence 357999999987 999999999753 346666532 1233333333443 6899999999862 3567
Q ss_pred eeecCCCC-CCCCCCeEEEEecCCCCC----CceeeeEEeeccccccCC----CCCCcccEEEEc-----cccCCCCccc
Q 015960 177 SIPVGVSA-NLRIGQKVYAIGHPLGRK----FTCTAGIISAFGLEPITA----TGPPIQGLIQID-----AAINRGNSGG 242 (397)
Q Consensus 177 ~~~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~~~~~~----~~~~~~~~i~~~-----~~i~~G~SGG 242 (397)
++.|.... .+..|+.+++.||..... .......+.-+....... ........+... ...|.|||||
T Consensus 120 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 199 (247)
T 1ddj_A 120 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGG 199 (247)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcC
Confidence 77776433 356789999999975421 122222222222111110 111112334432 3578999999
Q ss_pred ceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 243 PLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 243 Plvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||+-. +| .++||++++.... .....+....+....+|+++.++
T Consensus 200 PL~~~~~~~~~l~GI~S~g~~C~-~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 200 PLVCFEKDKYILQGVTSWGLGCA-RPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp EEEEECSSSEEEEEEECGGGCCB-BTTBCEEEEEGGGSHHHHHHHHH
T ss_pred cEEEEECCcEEEEEEEEECCCCC-CCCCCEEEEEhHHhHHHHHHHhh
Confidence 99853 33 5999999875322 22234666788888889888765
No 93
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.43 E-value=4.4e-12 Score=116.34 Aligned_cols=171 Identities=15% Similarity=0.135 Sum_probs=105.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEec---------CCcEEEEEEEEEcC-------CCCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLF---------DKTTLDAKVVGHDQ-------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~---------~g~~~~a~vv~~d~-------~~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+. +.+.+..+-+..++ .+|||||+++.+-
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (238)
T 3bg8_A 27 HLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 105 (238)
T ss_dssp EEEEEEEEETT-EEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCCC
T ss_pred EEEEEEEeeCC-EEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCcccc
Confidence 57999999987 999999999754 45667653 12345555444454 4699999998762
Q ss_pred -CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----Cceeee---EEeeccccccCCCCCCcccEEEE-----ccccCC
Q 015960 173 -HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAG---IISAFGLEPITATGPPIQGLIQI-----DAAINR 237 (397)
Q Consensus 173 -~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G---~vs~~~~~~~~~~~~~~~~~i~~-----~~~i~~ 237 (397)
..+.++.|.... ....++.+++.||..... ...... +++...+.............+.. ....|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (238)
T 3bg8_A 106 TDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACK 185 (238)
T ss_dssp BTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCCT
T ss_pred CCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcCC
Confidence 346777775432 256789999999975321 111221 22221111111100011233443 235789
Q ss_pred CCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 238 GNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 238 G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|||||||+-. +| .++||++++... ......+...-+....+|+++..+
T Consensus 186 GDSGgPL~~~~~~~~~l~GI~S~g~~C-~~~~~p~vyt~V~~y~~WI~~~~~ 236 (238)
T 3bg8_A 186 GDSGGPLSCKHNEVWHLVGITSWGEGC-AQRERPGVYTNVVEYVDWILEKTQ 236 (238)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSSS-SCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCcceEEEECCeEEEEEEEEECCCC-CCCCCCcEEEeHHHHHHHHHHHHh
Confidence 9999999954 34 499999997532 222335666788888888887653
No 94
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.42 E-value=1.1e-11 Score=114.20 Aligned_cols=170 Identities=16% Similarity=0.181 Sum_probs=104.7
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||+|||+.+. ...|.+.. .+.+..+-+..++ .+|||||+++.+- .
T Consensus 39 ~~~CgGtLI~~~-~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 116 (245)
T 1t8o_A 39 FHFCGGSLINEN-WVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 116 (245)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeeCC-EEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCC
Confidence 357999999987 999999999763 34454421 2344444444443 4699999999862 3
Q ss_pred CcceeecCCCC-CCCCCCeEEEEecCCCCC------CceeeeEEeeccccc---cCCCCCCcccEEEE---ccccCCCCc
Q 015960 174 KLRSIPVGVSA-NLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEP---ITATGPPIQGLIQI---DAAINRGNS 240 (397)
Q Consensus 174 ~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~---~~~i~~G~S 240 (397)
.+.++.|.... .+..|+.+++.||..... .......+.-+.... .... ......+.. ....|.|||
T Consensus 117 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~~Ca~~~~~~~C~GDS 195 (245)
T 1t8o_A 117 TVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGT-KIKDAMICAGASGVSSCMGDS 195 (245)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGG-GCCTTEEEEECSSCBCCTTCT
T ss_pred ceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcC-cCCCceEEccCCCCccCcccC
Confidence 56777776433 356899999999975321 122222222211111 0000 000123332 245789999
Q ss_pred ccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 241 GGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 241 GGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||||+.. +| .++||++++..... ....+....+...++|+++.++
T Consensus 196 GgPL~~~~~~~~~l~GI~S~g~~c~~-~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 196 GGPLVCKKNGAWTLVGIVSWGSSTCS-TSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp TCEEEEEETTEEEEEEEEEECCTTCC-TTSEEEEEEGGGTHHHHHHHHH
T ss_pred cCCEEEEECCEEEEEEEEEeCCCCCC-CCCCEEEEEHHHHHHHHHHHHc
Confidence 9999954 34 69999999864322 2335667788888888887654
No 95
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.41 E-value=7.3e-12 Score=114.99 Aligned_cols=172 Identities=16% Similarity=0.108 Sum_probs=108.4
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||+|||+.+...+.|++.. .+.+..+.+..++ .+|||||+++.+- .
T Consensus 24 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (241)
T 2jkh_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (241)
T ss_dssp CEEEEEEECSSS-EEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CcEEEEEEeeCC-EEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCC
Confidence 457999999987 999999999877777787742 2344455454444 4699999999862 2
Q ss_pred CcceeecCCCC----CCCCCCeEEEEecCCCCC-----CceeeeEEeeccc---cccCCCCCCcccEEEE-----ccccC
Q 015960 174 KLRSIPVGVSA----NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGL---EPITATGPPIQGLIQI-----DAAIN 236 (397)
Q Consensus 174 ~~~~~~l~~s~----~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~---~~~~~~~~~~~~~i~~-----~~~i~ 236 (397)
.+.++.|.... .+..|+.+++.||..... .......+.-+.. ..... .......+.. ....|
T Consensus 103 ~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~~C 181 (241)
T 2jkh_A 103 NVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSS-FIITQNMFCAGYDTKQEDAC 181 (241)
T ss_dssp TBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCS-SCCCTTEEEESCSSSSCBCC
T ss_pred CEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhccccc-CcCCCCeEEeeCCCCCCccC
Confidence 46677775422 145789999999975321 1122222222211 11110 0011233443 23578
Q ss_pred CCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 237 RGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 237 ~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
.|+|||||+.. +| .++||++++... ......+....+...++|+++.++.
T Consensus 182 ~GDsGgPl~~~~~~~~~l~GI~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (241)
T 2jkh_A 182 QGDSGGPHVTRFKDTYFVTGIVSWGEGC-ARKGKYGIYTKVTAFLKWIDRSMKT 234 (241)
T ss_dssp TTTTTCEEEEEETTEEEEEEEEEECSSS-SCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred cCcCCCeeEEEECCEEEEEEEEEECCCC-CCCCCceEEEEhHHHHHHHHHHhcc
Confidence 99999999954 44 499999997543 2223356678888899999887653
No 96
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.41 E-value=8.4e-14 Score=111.55 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=83.4
Q ss_pred cchhHHHHHHHhccccccccCCCchhHHHHHHcCCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC
Q 015960 275 DTVSGIVDQLVKFGKIIRPYLGIAHDQLLEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS 354 (397)
Q Consensus 275 ~~i~~~~~~l~~~g~~~~~~lGi~~~~~~~~~~~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~ 354 (397)
+.++++.++++++++..++++|+..... .....|+.|....|+|||+++||++ ||+|++|||++|.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~---~~~~~G~~V~~~~pas~A~~aGl~~-----------GDvI~~ing~~v~ 70 (105)
T 2i4s_A 5 DKVDAIREAIARNPQEIFQYVRLSQVKR---DDKVLGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDLT 70 (105)
T ss_dssp HHHHHHHHHHHHSGGGHHHHEEEEEEEE---TTEEEEEEEEECSCTHHHHHHTCCT-----------TCEEEEETTEETT
T ss_pred HHHHHHHHHHHHCHHHHHhhceeEEEec---CCcEEEEEEecCCCCCHHHHcCCCC-----------CCEEEEECCEECC
Confidence 4678899999999999999999854210 0112466677777777789999999 9999999999999
Q ss_pred CHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 355 NANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 355 ~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
++.|+..++....+|+++.++|.|+|+.+++.++|
T Consensus 71 ~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 71 DPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp STTHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred CHHHHHHHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 99999998887678999999999999988887764
No 97
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.41 E-value=8.7e-12 Score=115.63 Aligned_cols=172 Identities=16% Similarity=0.119 Sum_probs=106.6
Q ss_pred ceeEEEEEcCCCEEEEcccccCC---CCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG---ASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~---~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||+|||+.+ ...+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 24 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~ 102 (261)
T 3gyl_B 24 HVCGGSLVSEQ-WVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITF 102 (261)
T ss_dssp EEEEEEECSSS-EEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCCC
T ss_pred eEEEEEEEcCC-EEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCccC
Confidence 47999999987 99999999953 2456666642 2244444445554 3599999998762
Q ss_pred -CCcceeecCCC-CCCCCCCeEEEEecCCCCC-------CceeeeE---EeeccccccCC-------CCCCcccEEEE--
Q 015960 173 -HKLRSIPVGVS-ANLRIGQKVYAIGHPLGRK-------FTCTAGI---ISAFGLEPITA-------TGPPIQGLIQI-- 231 (397)
Q Consensus 173 -~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~-------~~~~~G~---vs~~~~~~~~~-------~~~~~~~~i~~-- 231 (397)
..+.++.|... ..+..|+.+++.||..... ....... ++...+..... ........+..
T Consensus 103 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~ 182 (261)
T 3gyl_B 103 SRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGY 182 (261)
T ss_dssp BTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESC
T ss_pred CCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeCC
Confidence 35677777543 3356899999999985321 1122222 22211111000 00011233443
Q ss_pred ---ccccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 232 ---DAAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 232 ---~~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
....|.|+|||||+.. +| .++||++++... +.....+....+...++|+++.++.
T Consensus 183 ~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c-~~~~~p~vyt~v~~~~~WI~~~i~~ 243 (261)
T 3gyl_B 183 VEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDAC-GARNRPGVYTLASSYASWIQSKVTE 243 (261)
T ss_dssp SSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCS-SCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCC-CCCCCCCEEEEHHHhHHHHHHHHhh
Confidence 2457899999999954 34 599999988543 2223356677888888888887653
No 98
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.41 E-value=1.1e-11 Score=113.97 Aligned_cols=171 Identities=13% Similarity=0.143 Sum_probs=105.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC---------CCCeEEEEEcCC-
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ---------GTDLAVLHIDAP- 171 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~---------~~DlAlL~v~~~- 171 (397)
..|+|.+|+++ ||||||||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+
T Consensus 29 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 29 YVCGGSLISPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred eEEEEEEEeCC-EEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 47999999987 999999999653 346666532 2344554444443 259999999875
Q ss_pred ------CCCcceeecCCC-CCCCCCCeEEEEecCCCCCC------ceeeeEEeeccccccCC---CCC-CcccEEEE---
Q 015960 172 ------NHKLRSIPVGVS-ANLRIGQKVYAIGHPLGRKF------TCTAGIISAFGLEPITA---TGP-PIQGLIQI--- 231 (397)
Q Consensus 172 ------~~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~~------~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~--- 231 (397)
...+.++.|... ..+..|+.+++.||...... ......+.-+....... .+. .....+..
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 235667777543 34677999999999753211 12222222222111111 000 01223433
Q ss_pred --ccccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 --DAAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 --~~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|+|||||+.. +| .++||++++... ......+....+...++|+++..+
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c-~~~~~p~vyt~V~~~~~WI~~~~~ 246 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGC-ALKDKPGVYTRVSHFLPWIRSHTK 246 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSS-SBTTBCEEEEEGGGCHHHHHHHTT
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCC-CCCCCCeEEEEHHHHHHHHHHHhc
Confidence 2457899999999953 34 499999988532 222335667788888888887643
No 99
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.41 E-value=1.8e-11 Score=112.97 Aligned_cols=170 Identities=12% Similarity=0.122 Sum_probs=106.3
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCC---
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAP--- 171 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~--- 171 (397)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++.+
T Consensus 30 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~ 108 (252)
T 1rtf_B 30 FLCGGILISSC-WILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108 (252)
T ss_dssp EEEEEEECSSS-EEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSC
T ss_pred EEEEEEEEeCC-EEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCcccc
Confidence 47999999987 999999999753 456777632 2344544444443 469999999876
Q ss_pred ----CCCcceeecCCCC-CCCCCCeEEEEecCCCCC------CceeeeEEeeccccccCC---CCC-CcccEEEEc----
Q 015960 172 ----NHKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPITA---TGP-PIQGLIQID---- 232 (397)
Q Consensus 172 ----~~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~~---- 232 (397)
...+.++.|.... .+..++.+.+.||..... .......+.-+....... ... .....+...
T Consensus 109 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 188 (252)
T 1rtf_B 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188 (252)
T ss_dssp CSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC-
T ss_pred ccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCC
Confidence 2346677776433 356789999999975321 122223332222221111 011 112334331
Q ss_pred -------cccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 233 -------AAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 233 -------~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
...|.|+|||||+-. +| .++||++++.... .....+....+...++|+++.+
T Consensus 189 ~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~-~~~~p~vyt~V~~y~~WI~~~~ 250 (252)
T 1rtf_B 189 GGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCG-QKDVPGVYTKVTNYLDWIRDNM 250 (252)
T ss_dssp -----CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSS-CTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCC-CCCCCeEEEEHHHHHHHHHHhc
Confidence 457899999999953 45 6999999986432 2223466678888888888754
No 100
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.41 E-value=1.6e-12 Score=103.12 Aligned_cols=74 Identities=23% Similarity=0.388 Sum_probs=68.9
Q ss_pred CCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEE
Q 015960 309 ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILII 388 (397)
Q Consensus 309 ~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 388 (397)
..|++|..+.++|||++ ||++ ||+|++|||++|.++.++..++....+|+++.++|.|+|+.+++.++
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 73 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHA-----------GDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIK 73 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCT-----------TCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCCCCchHH-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 37999999999999995 9999 99999999999999999999998877899999999999999999999
Q ss_pred eeeCCC
Q 015960 389 LEVEPD 394 (397)
Q Consensus 389 l~~~~~ 394 (397)
+.++++
T Consensus 74 ~~~~~~ 79 (100)
T 3i18_A 74 LTAIDK 79 (100)
T ss_dssp CEECST
T ss_pred EecCCC
Confidence 987764
No 101
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.40 E-value=2e-12 Score=118.67 Aligned_cols=172 Identities=16% Similarity=0.198 Sum_probs=105.0
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecC--CcE---------EEEEEEEEcC-------C--CCeEEEEEcCCC-
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD--KTT---------LDAKVVGHDQ-------G--TDLAVLHIDAPN- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~--g~~---------~~a~vv~~d~-------~--~DlAlL~v~~~~- 172 (397)
..|+|.+|+++ ||||+|||+.+...+.|.+.. -.. +..+-+..++ . +|||||+++.+-
T Consensus 26 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~ 104 (240)
T 1fon_A 26 HTCGGSLIAPD-WVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQ 104 (240)
T ss_dssp EEECCEEEETT-EEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCC
T ss_pred eEEEEEEeeCC-EEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCccc
Confidence 47999999987 999999999887777776642 111 1111122232 2 899999999862
Q ss_pred --CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccCC---CCC-CcccEEEEc---cccCC
Q 015960 173 --HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPITA---TGP-PIQGLIQID---AAINR 237 (397)
Q Consensus 173 --~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~~---~~i~~ 237 (397)
..+.++.|.... .+..|+.+++.||..... .......+.-+....... .+. .....+... ...|.
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~ 184 (240)
T 1fon_A 105 LGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCN 184 (240)
T ss_dssp CTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTT
T ss_pred cCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccC
Confidence 356777776543 356899999999975321 112222221111111110 010 012234332 45689
Q ss_pred CCcccceecC--Cc--cEEEEEeeeec-cCCCccCceeeEeccchhHHHHHHHh
Q 015960 238 GNSGGPLLDS--SG--SLIGVNTSIIT-RTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 238 G~SGGPlvn~--~G--~vVGI~s~~~~-~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
|+|||||+-. +| .++||++++.. .+......+....+....+|+++.++
T Consensus 185 GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 238 (240)
T 1fon_A 185 GDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIA 238 (240)
T ss_dssp SCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHh
Confidence 9999999843 56 79999998752 22222335667788888888887664
No 102
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.40 E-value=6.2e-12 Score=114.85 Aligned_cols=170 Identities=13% Similarity=0.101 Sum_probs=103.0
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC----CeEEEEecC----------CcEEEEEEEEEcCC-------CCeEEEEEcCCC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA----SSVKVTLFD----------KTTLDAKVVGHDQG-------TDLAVLHIDAPN 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~----~~i~V~~~~----------g~~~~a~vv~~d~~-------~DlAlL~v~~~~ 172 (397)
..|+|.+|+++ ||||+|||+.+. ..+.+.+.. ...+..+-+..++. +|||||+++.+-
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~ 102 (235)
T 4dgj_A 24 LLCGASLVSSD-WLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKV 102 (235)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCC
T ss_pred eEEEEEEeeCC-EEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCcc
Confidence 47999999987 999999999542 345565531 12333444444543 699999998752
Q ss_pred ---CCcceeecCCCCC-CCCCCeEEEEecCCCCC-----CceeeeEEeecc---ccccCCCCCCcccEEEEc-----ccc
Q 015960 173 ---HKLRSIPVGVSAN-LRIGQKVYAIGHPLGRK-----FTCTAGIISAFG---LEPITATGPPIQGLIQID-----AAI 235 (397)
Q Consensus 173 ---~~~~~~~l~~s~~-~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~---~~~~~~~~~~~~~~i~~~-----~~i 235 (397)
..+.++.|..... +..|+.+.+.||..... .......+.-+. +.............+... ...
T Consensus 103 ~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~ 182 (235)
T 4dgj_A 103 NYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGIDS 182 (235)
T ss_dssp CCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCCTTEEEECCTTCCCBC
T ss_pred ccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCCCCeEeecCCCCCCcc
Confidence 3467787765433 56899999999974211 112222222211 111111001112344432 356
Q ss_pred CCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 236 NRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 236 ~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
|.|+|||||+-. +| .++||++++.... .....+....+...++|+++.+
T Consensus 183 C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~-~~~~p~vyt~V~~~~~WI~~~i 234 (235)
T 4dgj_A 183 CQGDSGGPLMCQENNRWFLAGVTSFGYECA-LPNRPGVYARVSRFTEWIQSFL 234 (235)
T ss_dssp CTTCTTCEEEEEETTEEEEEEEEEECSSSS-CTTCCEEEEEGGGTHHHHHTTC
T ss_pred CCCCCCCeEEEEECCcEEEEEEEEEcCCCC-CCCCCEEEeeHHHHHHHHHHHh
Confidence 899999999954 34 3999999985432 2233566677788888887643
No 103
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.40 E-value=1.6e-11 Score=115.56 Aligned_cols=172 Identities=14% Similarity=0.164 Sum_probs=108.6
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC--------CCCeEEEEEcCC-
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ--------GTDLAVLHIDAP- 171 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~--------~~DlAlL~v~~~- 171 (397)
...|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++.+
T Consensus 57 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~ 135 (283)
T 1yc0_A 57 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 135 (283)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBT
T ss_pred CcEEEEEEeeCC-EEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCc
Confidence 357999999987 999999999764 457777642 2334444333332 469999999875
Q ss_pred ------CCCcceeecCCC-CCCCCCCeEEEEecCCCC------CCceeeeEEeeccccccCC---CCCC-cccEEEEc--
Q 015960 172 ------NHKLRSIPVGVS-ANLRIGQKVYAIGHPLGR------KFTCTAGIISAFGLEPITA---TGPP-IQGLIQID-- 232 (397)
Q Consensus 172 ------~~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~------~~~~~~G~vs~~~~~~~~~---~~~~-~~~~i~~~-- 232 (397)
...+.++.|... ..+..|+.+++.||.... ........+.-+....... .+.. ....+...
T Consensus 136 ~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~ 215 (283)
T 1yc0_A 136 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 215 (283)
T ss_dssp TBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCC
Confidence 234677777643 335689999999997532 1222333333222221111 1100 12344442
Q ss_pred ---cccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 233 ---AAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 233 ---~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
...|.|||||||+.. +| .++||++++... +.....+....+....+|+++.++
T Consensus 216 ~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C-~~~~~p~vyt~V~~y~~WI~~~i~ 274 (283)
T 1yc0_A 216 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGC-GRLHKPGVYTRVANYVDWINDRIR 274 (283)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTT-TCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred CCCCccCCCCCCCceEEEECCcEEEEEEEEECCCC-CCCCCCeEEEEhhhHHHHHHHHhc
Confidence 357899999999954 45 599999998642 222335667788888999988765
No 104
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.39 E-value=1.3e-11 Score=115.73 Aligned_cols=169 Identities=17% Similarity=0.160 Sum_probs=102.6
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC------CeEEEEecC--------------------CcEEEEEEEEEcC--------
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA------SSVKVTLFD--------------------KTTLDAKVVGHDQ-------- 159 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~------~~i~V~~~~--------------------g~~~~a~vv~~d~-------- 159 (397)
..|+|.+|+++ ||||||||+.+. ....|++.. ...+..+-+..++
T Consensus 51 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 129 (278)
T 2olg_A 51 FACGGSLINNR-YIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKD 129 (278)
T ss_dssp EEEEEEECSSS-EEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSS
T ss_pred eeEEEEEEeCC-EEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCC
Confidence 47999999987 999999999752 345666531 1233333333332
Q ss_pred -CCCeEEEEEcCCC---CCcceeecCCCC-CCCCCCeEEEEecCCCCC----CceeeeEEeecccccc---CCC-C-CCc
Q 015960 160 -GTDLAVLHIDAPN---HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK----FTCTAGIISAFGLEPI---TAT-G-PPI 225 (397)
Q Consensus 160 -~~DlAlL~v~~~~---~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~~~~---~~~-~-~~~ 225 (397)
.+|||||+++.+- ..+.++.|.... .+..|+.+++.||..... .......+.-+..... ... + ...
T Consensus 130 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~ 209 (278)
T 2olg_A 130 RYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR 209 (278)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCC
T ss_pred CCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccCC
Confidence 4799999998862 356788776543 367899999999975322 1122222222221111 100 0 011
Q ss_pred ccEEEE----ccccCCCCcccceecC--Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHH
Q 015960 226 QGLIQI----DAAINRGNSGGPLLDS--SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQL 284 (397)
Q Consensus 226 ~~~i~~----~~~i~~G~SGGPlvn~--~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l 284 (397)
...+.. ....|.|||||||+-. +| .++||+|++... +.....+....+....+|+++.
T Consensus 210 ~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C-~~~~~p~vyt~V~~y~~WI~~~ 275 (278)
T 2olg_A 210 SSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATC-GTEGWPGIYTKVGKYRDWIEGN 275 (278)
T ss_dssp TTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBC-STTCBCEEEEEGGGGHHHHHTT
T ss_pred CceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCC-CCCCCCcEEeEHHHHHHHHHHh
Confidence 233443 2357899999999953 34 589999998432 2222245667777788887753
No 105
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.39 E-value=1.9e-13 Score=106.47 Aligned_cols=74 Identities=28% Similarity=0.408 Sum_probs=68.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
.|++|..|.++|||++ ||++ ||+|++|||+++.++.++..++...++|++++|+|+|+|+.+++++++
T Consensus 1 ~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 68 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KIEV-----------GDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTL 68 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CCCS-----------SCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCEECCCEEC
T ss_pred CceEEEEECCCChHHH-cCCC-----------CCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 3788999999999999 9999 999999999999999999999988778999999999999999999999
Q ss_pred eeCCCC
Q 015960 390 EVEPDE 395 (397)
Q Consensus 390 ~~~~~~ 395 (397)
.+.++.
T Consensus 69 ~~~~~~ 74 (91)
T 2kjp_A 69 KQFPDE 74 (91)
T ss_dssp CCCTTC
T ss_pred eccCCC
Confidence 877643
No 106
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.38 E-value=8.8e-12 Score=114.42 Aligned_cols=169 Identities=15% Similarity=0.144 Sum_probs=103.3
Q ss_pred ceeEEEEEcCCCEEEEcccccCC-------CCeEEEEecCC--------cEEEEEEEEEcC----------CCCeEEEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG-------ASSVKVTLFDK--------TTLDAKVVGHDQ----------GTDLAVLHI 168 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~-------~~~i~V~~~~g--------~~~~a~vv~~d~----------~~DlAlL~v 168 (397)
..|+|.+|+++ ||||||||+.. ...+.|.+... ..+..+-+..++ .+|||||++
T Consensus 22 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 100 (242)
T 2qy0_B 22 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 100 (242)
T ss_dssp SEEEEEEETTT-EEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEEE
T ss_pred CCEEEEEEeCC-EEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEEE
Confidence 46999999987 99999999963 23456666421 123334333443 349999999
Q ss_pred cCCC---CCcceeecCCCCC-CCCCCeEEEEecCCCCC---CceeeeEEeeccccccC-----C--CCCCcccEEEE---
Q 015960 169 DAPN---HKLRSIPVGVSAN-LRIGQKVYAIGHPLGRK---FTCTAGIISAFGLEPIT-----A--TGPPIQGLIQI--- 231 (397)
Q Consensus 169 ~~~~---~~~~~~~l~~s~~-~~~G~~V~~iG~p~g~~---~~~~~G~vs~~~~~~~~-----~--~~~~~~~~i~~--- 231 (397)
+.+- ..+.|+.|..... +..|..+++.||..... .......+.-+...... . ........+..
T Consensus 101 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 180 (242)
T 2qy0_B 101 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 180 (242)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCC
Confidence 9862 3567777765432 46799999999975432 12222222222111100 0 00011234444
Q ss_pred --ccccCCCCcccceecCC---c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 --DAAINRGNSGGPLLDSS---G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 --~~~i~~G~SGGPlvn~~---G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|+|||||+..+ + .++||+|++..... +.+....+....+|+++.++
T Consensus 181 ~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~---~~~vyt~V~~y~~WI~~~~~ 239 (242)
T 2qy0_B 181 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR---GYGFYTKVLNYVDWIKKEME 239 (242)
T ss_dssp TCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS---SCEEEEEGGGGHHHHHHHTT
T ss_pred CCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC---CCcEEEEHHHHHHHHHHHhh
Confidence 23578999999999532 2 49999999864321 24667788888899888664
No 107
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.37 E-value=1.4e-11 Score=115.37 Aligned_cols=171 Identities=13% Similarity=0.135 Sum_probs=105.5
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC---------CCCeEEEEEcCC-
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ---------GTDLAVLHIDAP- 171 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~---------~~DlAlL~v~~~- 171 (397)
..|+|.+|+++ ||||||||+.+. ..+.|.+.. +..+..+-+..++ .+|||||+++.+
T Consensus 52 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 130 (276)
T 2jde_A 52 YVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130 (276)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTT
T ss_pred eeeeeEEeeCC-EEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCcc
Confidence 47999999987 999999999653 346666532 2344444444443 259999999875
Q ss_pred ------CCCcceeecCCC-CCCCCCCeEEEEecCCCCC------CceeeeEEeeccccccCC---CCC-CcccEEEE---
Q 015960 172 ------NHKLRSIPVGVS-ANLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPITA---TGP-PIQGLIQI--- 231 (397)
Q Consensus 172 ------~~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~~---~~~-~~~~~i~~--- 231 (397)
...+.++.|... ..+..|+.+++.||..... .......+.-+....... .+. .....+..
T Consensus 131 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 210 (276)
T 2jde_A 131 GRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 210 (276)
T ss_dssp SCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECT
T ss_pred ccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCC
Confidence 235677777543 3467899999999975321 112222222222111111 000 11233443
Q ss_pred --ccccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 --DAAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 --~~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+.. +| .|+||+|++... ......+....+....+|+++..+
T Consensus 211 ~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C-~~~~~p~vyt~V~~y~~WI~~~~~ 269 (276)
T 2jde_A 211 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGC-ALKDKPGVYTRVSHFLPWIRSHTK 269 (276)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSS-SCTTCCEEEEEGGGGHHHHHHTC-
T ss_pred CCCCcccccccCcceEEEeCCcEEEEEEEEECCCC-CCCCCCeEEEEHHHHHHHHHHHhh
Confidence 2467899999999953 34 499999998542 222335667788888888887553
No 108
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.36 E-value=5.1e-11 Score=112.64 Aligned_cols=172 Identities=12% Similarity=0.099 Sum_probs=105.2
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC--------------CcEEEEEEEEEcC-------CCCeEEEEEc
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD--------------KTTLDAKVVGHDQ-------GTDLAVLHID 169 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~--------------g~~~~a~vv~~d~-------~~DlAlL~v~ 169 (397)
..|.|.+|+++ ||||||||+... ..+.|.+.. .+.+..+-+..++ .+||||||++
T Consensus 30 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~ 108 (290)
T 1fiw_A 30 HVCGGSLLNSQ-WLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKIT 108 (290)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEEE
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 47999999987 999999999753 346666531 1233344344443 4699999998
Q ss_pred CCC---CCcceeecCCCC--CCCCCCeEEEEecCCCCC------CceeeeEEeeccccccCC---C-CCCcccEEEEc--
Q 015960 170 APN---HKLRSIPVGVSA--NLRIGQKVYAIGHPLGRK------FTCTAGIISAFGLEPITA---T-GPPIQGLIQID-- 232 (397)
Q Consensus 170 ~~~---~~~~~~~l~~s~--~~~~G~~V~~iG~p~g~~------~~~~~G~vs~~~~~~~~~---~-~~~~~~~i~~~-- 232 (397)
.+- ..+.++.|.... .+..|+.+++.||..... .......+.-+....... . .......+...
T Consensus 109 ~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~ 188 (290)
T 1fiw_A 109 PPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYP 188 (290)
T ss_dssp SCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECT
T ss_pred CccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCCEEEEecC
Confidence 762 346777775432 235689999999975321 122222332222211110 0 11112344432
Q ss_pred ---cccCCCCcccceecCC---c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 233 ---AAINRGNSGGPLLDSS---G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 233 ---~~i~~G~SGGPlvn~~---G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
...|.|||||||+-.+ | .++||+|++... ......+...-+...++|+++.++.
T Consensus 189 ~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C-~~~~~p~vyt~V~~y~~WI~~~~~~ 250 (290)
T 1fiw_A 189 EGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGC-ARAKRPGVYTSTWSYLNWIASKIGS 250 (290)
T ss_dssp TCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSS-SBTTBCEEEEESGGGHHHHHHHHCH
T ss_pred CCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCC-CCCCCCeEEEEHHHhHHHHHHHhCc
Confidence 3579999999999432 3 599999998542 2222346667788888898887653
No 109
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.36 E-value=1.3e-11 Score=113.57 Aligned_cols=171 Identities=14% Similarity=0.144 Sum_probs=105.3
Q ss_pred ceeEEEEEcCCCEEEEcccccCC----CCeEEEEecC------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG----ASSVKVTLFD------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~----~~~i~V~~~~------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
..|+|.+|+++ ||||+|||+.. ...+.|.+.+ ++.+..+-+..++ .+|||||+++.+- .
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 105 (245)
T 2f9n_A 27 HFCGGSLIHPQ-WVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISS 105 (245)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCS
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCC
Confidence 47999999987 99999999953 2456676542 2334444444444 4699999999862 3
Q ss_pred CcceeecCCCC-CCCCCCeEEEEecCCCCCC-------ceeee---EEeeccccccCCC--------CCCcccEEEE---
Q 015960 174 KLRSIPVGVSA-NLRIGQKVYAIGHPLGRKF-------TCTAG---IISAFGLEPITAT--------GPPIQGLIQI--- 231 (397)
Q Consensus 174 ~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~~-------~~~~G---~vs~~~~~~~~~~--------~~~~~~~i~~--- 231 (397)
.+.++.|.... .+..|+.+++.||...... ..... +++...+...... .......+..
T Consensus 106 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~~ 185 (245)
T 2f9n_A 106 RVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNS 185 (245)
T ss_dssp SSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECCS
T ss_pred CccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecCC
Confidence 56777776433 3568999999999753211 11111 1221111110000 0001223433
Q ss_pred ccccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 DAAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 ~~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+-. +| .++||++++... ......+....+...++|+++.++
T Consensus 186 ~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C-~~~~~p~vyt~V~~y~~WI~~~~~ 242 (245)
T 2f9n_A 186 QRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGC-AQPNRPGIYTRVTYYLDWIHHYVP 242 (245)
T ss_dssp SSBCCTTCTTCEEEEEETTEEEEEEEEEECSSS-SBTTBCEEEEEGGGGHHHHHHHSC
T ss_pred CCCcCCCCCCCceEEEECCEEEEEEEEEeCCCC-CCCCCCeEEEEHHHHHHHHHHHhh
Confidence 2357899999999954 45 589999997532 222334667788888899887654
No 110
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.36 E-value=3.3e-11 Score=110.13 Aligned_cols=170 Identities=16% Similarity=0.112 Sum_probs=104.8
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC---------CCCeEEEEEcCCC--
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ---------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~---------~~DlAlL~v~~~~-- 172 (397)
...|+|.+|+++ ||||+|||+.....+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 23 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~ 101 (235)
T 2wph_S 23 DAFCGGSIVNEK-WIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVL 101 (235)
T ss_dssp TTCEEEEEEETT-EEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCC
T ss_pred CeeEEEEEEeCC-EEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcC
Confidence 357999999987 999999999877777777642 2234444333333 3599999999862
Q ss_pred -CCcceeecCCCCC---CCCCCeEEEEecCCCCC-----CceeeeEEeeccccc---cCCCCCCcccEEEEc-----ccc
Q 015960 173 -HKLRSIPVGVSAN---LRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEP---ITATGPPIQGLIQID-----AAI 235 (397)
Q Consensus 173 -~~~~~~~l~~s~~---~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~---~~~~~~~~~~~i~~~-----~~i 235 (397)
..+.++.|..... +..+..+++.||..... .......+.-+.... ... .......+... ...
T Consensus 102 ~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~Ca~~~~~~~~~ 180 (235)
T 2wph_S 102 NSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTK-FTITNNMFCAGFHEGGRDS 180 (235)
T ss_dssp BTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCS-SCCCTTEEEESCTTCSCBC
T ss_pred CCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCccc-CCCCCCEEEeCCCCCCCcc
Confidence 3456777753221 23588899999874321 112222222111111 110 00112344432 357
Q ss_pred CCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 236 NRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 236 ~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
|.|||||||+.. +| .++||++++... ......+....+...++|+++..
T Consensus 181 C~GDsGgPl~~~~~~~~~l~GI~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~~ 232 (235)
T 2wph_S 181 CQGDSGGPHVTEVEGTSFLTGIISWGEEC-AMKGKYGIYTKVSRYVNWIKEKT 232 (235)
T ss_dssp CTTCTTCEEEEEETTEEEEEEEEEECSSS-SCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCCCCCCceEEeECCeEEEEEEEEECCCC-CCCCCCeEEEEHHHhHHHHHHHH
Confidence 899999999953 44 599999997542 22233566778888888888764
No 111
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.35 E-value=4.8e-11 Score=110.28 Aligned_cols=171 Identities=11% Similarity=0.087 Sum_probs=102.8
Q ss_pred ceeEEEEEcCCCEEEEcccccC--------CCCeEEEEecCC----------cEEEEEEEEEcC--------CCCeEEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIE--------GASSVKVTLFDK----------TTLDAKVVGHDQ--------GTDLAVLH 167 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~--------~~~~i~V~~~~g----------~~~~a~vv~~d~--------~~DlAlL~ 167 (397)
..|+|.+|+++ ||||+|||+. ....+.|.+... +....+-+..++ .+|||||+
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~ 104 (259)
T 3rm2_H 26 LLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 104 (259)
T ss_dssp EEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEE
T ss_pred eEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEEE
Confidence 47999999987 9999999994 234566666421 122233333333 35999999
Q ss_pred EcCCC---CCcceeecCCCCC----CCCCCeEEEEecCCCCC-----------CceeeeEEeeccccccC-CCC-CCccc
Q 015960 168 IDAPN---HKLRSIPVGVSAN----LRIGQKVYAIGHPLGRK-----------FTCTAGIISAFGLEPIT-ATG-PPIQG 227 (397)
Q Consensus 168 v~~~~---~~~~~~~l~~s~~----~~~G~~V~~iG~p~g~~-----------~~~~~G~vs~~~~~~~~-~~~-~~~~~ 227 (397)
++.+- ..+.++.|..... +..|..+.+.||..... .......+.-+...... ... .....
T Consensus 105 L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 184 (259)
T 3rm2_H 105 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 184 (259)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred eCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCCCc
Confidence 99862 3466777754221 35799999999985321 11222222222111100 000 11123
Q ss_pred EEEEc--------cccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 228 LIQID--------AAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 228 ~i~~~--------~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
.+... ...|.|+|||||+-. +| .++||++++... ......+....+...++|+++.++
T Consensus 185 ~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~i~ 255 (259)
T 3rm2_H 185 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGC-DRDGKYGFYTHVFRLKKWIQKVID 255 (259)
T ss_dssp EEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSS-SCTTCCEEEEETGGGHHHHHHHHH
T ss_pred eEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCC-CCCCCCeEEEEHHHhHHHHHHHHH
Confidence 44442 267999999999843 33 699999998542 222335667788888888888764
No 112
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.35 E-value=1.5e-11 Score=113.81 Aligned_cols=172 Identities=12% Similarity=0.091 Sum_probs=106.7
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCC---eEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGAS---SVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~---~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||+|||+.+.. .+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~ 102 (254)
T 2bz6_H 24 QLCGGTLINTI-WVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVL 102 (254)
T ss_dssp EEEEEEECSSS-EEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCCC
T ss_pred cEEEEEEecCC-EEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccc
Confidence 47999999987 9999999997654 37777642 2344444444443 4699999999862
Q ss_pred -CCcceeecCCCC----CCCCCCeEEEEecCCCCC-----CceeeeEEeecc---ccccCCC---C-CCcccEEEEc---
Q 015960 173 -HKLRSIPVGVSA----NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFG---LEPITAT---G-PPIQGLIQID--- 232 (397)
Q Consensus 173 -~~~~~~~l~~s~----~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~---~~~~~~~---~-~~~~~~i~~~--- 232 (397)
..+.++.|.... .+..|+.+++.||..... .......+..+. +...... . ......+...
T Consensus 103 ~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~ 182 (254)
T 2bz6_H 103 TDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSD 182 (254)
T ss_dssp BTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSS
T ss_pred CCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCCC
Confidence 356777775422 245689999999974321 112222222211 1111100 0 1112344432
Q ss_pred --cccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 233 --AAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 233 --~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
...|.|||||||+.. +| .++||++++... ......+....+...++|+++.++.
T Consensus 183 ~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C-~~~~~p~vyt~V~~~~~WI~~~~~~ 241 (254)
T 2bz6_H 183 GSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGC-ATVGHFGVYTRVSQYIEWLQKLMRS 241 (254)
T ss_dssp SSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSS-SCTTCCEEEEEGGGGHHHHHHHHTS
T ss_pred CCCccccccCCCceEEeECCEEEEEEEEEECCCC-CCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 357899999999954 45 599999997542 2223356678888899999988764
No 113
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.34 E-value=1.6e-12 Score=101.89 Aligned_cols=73 Identities=23% Similarity=0.431 Sum_probs=68.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
.|++|..+.++|||++ ||++ ||+|++|||+++.++.++..++...++|+++.++|.|+|+.+++++++
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~-----------GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEA-----------GDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCT-----------TCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 6899999999999999 9999 999999999999999999999988778999999999999999999998
Q ss_pred eeCCC
Q 015960 390 EVEPD 394 (397)
Q Consensus 390 ~~~~~ 394 (397)
.+++.
T Consensus 73 ~~~~~ 77 (94)
T 2kl1_A 73 KPFPH 77 (94)
T ss_dssp CBCSS
T ss_pred eeCCC
Confidence 87763
No 114
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.34 E-value=3.4e-11 Score=113.73 Aligned_cols=171 Identities=11% Similarity=0.082 Sum_probs=103.9
Q ss_pred ceeEEEEEcCCCEEEEcccccCC--------CCeEEEEecC----------CcEEEEEEEEEcC--------CCCeEEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG--------ASSVKVTLFD----------KTTLDAKVVGHDQ--------GTDLAVLH 167 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~--------~~~i~V~~~~----------g~~~~a~vv~~d~--------~~DlAlL~ 167 (397)
..|.|.+|+++ ||||||||+.. ...+.|++.. .+.+..+-+..++ .+|||||+
T Consensus 56 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~ 134 (289)
T 2bdy_A 56 LLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 134 (289)
T ss_dssp EEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEE
T ss_pred EEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEEEE
Confidence 57999999987 99999999942 3456776642 1223333333332 36999999
Q ss_pred EcCCC---CCcceeecCCCCC----CCCCCeEEEEecCCCCC-----------CceeeeEEeeccccccC-CCC-CCccc
Q 015960 168 IDAPN---HKLRSIPVGVSAN----LRIGQKVYAIGHPLGRK-----------FTCTAGIISAFGLEPIT-ATG-PPIQG 227 (397)
Q Consensus 168 v~~~~---~~~~~~~l~~s~~----~~~G~~V~~iG~p~g~~-----------~~~~~G~vs~~~~~~~~-~~~-~~~~~ 227 (397)
++.+- ..+.++.|..... +..|..+.+.||..... .......+.-+...... ... .....
T Consensus 135 L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~i~~~ 214 (289)
T 2bdy_A 135 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 214 (289)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred ECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEEEEEECHHHhhccccCcCCCC
Confidence 99862 3567777754322 46799999999975321 11222222222111100 000 01123
Q ss_pred EEEE--------ccccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 228 LIQI--------DAAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 228 ~i~~--------~~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
.+.. ....|.|||||||+-. +| .++||+|++... +.....+...-+...++|+++.++
T Consensus 215 ~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C-~~~~~p~vyt~V~~y~~WI~~~i~ 285 (289)
T 2bdy_A 215 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGC-DRDGKYGFYTHVFRLKKWIQKVID 285 (289)
T ss_dssp EEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSS-SCTTCCEEEEETGGGHHHHHHHHH
T ss_pred EEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCC-CCCCCCEEEEEHHHHHHHHHHHHH
Confidence 4444 2357999999999843 34 489999998532 222335667788888999988664
No 115
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.33 E-value=2.8e-11 Score=114.06 Aligned_cols=185 Identities=16% Similarity=0.078 Sum_probs=114.2
Q ss_pred HcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecC------CcEEEEEEEEEcC---
Q 015960 89 ENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD------KTTLDAKVVGHDQ--- 159 (397)
Q Consensus 89 ~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~------g~~~~a~vv~~d~--- 159 (397)
.--|-.|.|.. ......|+|.+|+++ ||||+|||+.+...+.|++.. .+.+..+-+..++
T Consensus 62 ~~~Pw~v~l~~----------~~~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~ 130 (283)
T 3f1s_B 62 QDLPWQVKLTN----------SEGKDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYD 130 (283)
T ss_dssp -CCTTEEEEEC----------TTSCEEEEEEEEETT-EEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCB
T ss_pred cccCCEEEEEe----------cCCCeeeccEEecCC-EEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCC
Confidence 34566777753 123457999999987 999999999887778888752 3445555455554
Q ss_pred ----CCCeEEEEEcCC---CCCcceeecCCCC----CCCCCCeEEEEecCCCCC---CceeeeEEeecc---ccccCCCC
Q 015960 160 ----GTDLAVLHIDAP---NHKLRSIPVGVSA----NLRIGQKVYAIGHPLGRK---FTCTAGIISAFG---LEPITATG 222 (397)
Q Consensus 160 ----~~DlAlL~v~~~---~~~~~~~~l~~s~----~~~~G~~V~~iG~p~g~~---~~~~~G~vs~~~---~~~~~~~~ 222 (397)
.+|||||+++.+ ...+.|+.|.... .+..|+.+++.||..... .......+.-+. ...... .
T Consensus 131 ~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~-~ 209 (283)
T 3f1s_B 131 ADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLN-V 209 (283)
T ss_dssp TTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHT-S
T ss_pred CCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhc-C
Confidence 469999999986 2356777776433 357899999999975211 111222222111 111100 0
Q ss_pred CCcccEEEE--ccccCCCCcccceecC-Ccc--EEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 223 PPIQGLIQI--DAAINRGNSGGPLLDS-SGS--LIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 223 ~~~~~~i~~--~~~i~~G~SGGPlvn~-~G~--vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
......+.. ......|+|||||+-. +|+ |+||++++. .......+...-+....+|+++.++.
T Consensus 210 ~~~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~--c~~~~~p~vyt~V~~y~~WI~~~~~~ 277 (283)
T 3f1s_B 210 TVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIMNA 277 (283)
T ss_dssp CCCTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCS--GGGCSSEEEEEEGGGGHHHHHHHHTC
T ss_pred CCCCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCC--CCCCCcceEEEEhHHhHHHHHHHhhc
Confidence 001223332 2234468999999953 565 999998753 22223355777888889999887754
No 116
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.33 E-value=4.2e-11 Score=117.23 Aligned_cols=173 Identities=14% Similarity=0.123 Sum_probs=107.0
Q ss_pred CceeEEEEEcCCCEEEEcccccCC----CCeEEEEecC-------CcEEEEEEEEEcC-------------CCCeEEEEE
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEG----ASSVKVTLFD-------KTTLDAKVVGHDQ-------------GTDLAVLHI 168 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~----~~~i~V~~~~-------g~~~~a~vv~~d~-------------~~DlAlL~v 168 (397)
...|.|.+|+++ ||||||||+.. ...+.|.+.. +..+..+-+..++ .+||||||+
T Consensus 140 ~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL 218 (372)
T 1z8g_A 140 AHLCGGSLLSGD-WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHL 218 (372)
T ss_dssp EEEEEEEESSSS-EEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEE
T ss_pred ceEEEEEEecCC-EEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEE
Confidence 357999999987 99999999942 2456666532 2344444444443 359999999
Q ss_pred cCC---CCCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccccC---CCC-CCcccEEEEc---
Q 015960 169 DAP---NHKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEPIT---ATG-PPIQGLIQID--- 232 (397)
Q Consensus 169 ~~~---~~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~~~---~~~-~~~~~~i~~~--- 232 (397)
+.+ ...+.|+.|.... .+..|+.+++.||..... .......+.-+...... ..+ ......+...
T Consensus 219 ~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~ 298 (372)
T 1z8g_A 219 SSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPE 298 (372)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTT
T ss_pred CCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCC
Confidence 876 2356788776432 356799999999975321 11222222222211111 011 1112344442
Q ss_pred --cccCCCCcccceecCC-----c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 233 --AAINRGNSGGPLLDSS-----G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 233 --~~i~~G~SGGPlvn~~-----G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
...|.|||||||+-.+ | .++||+|++... ......+....+....+|+++.++.
T Consensus 299 ~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C-~~~~~p~vyt~V~~y~~WI~~~i~~ 361 (372)
T 1z8g_A 299 GGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGC-ALAQKPGVYTKVSDFREWIFQAIKT 361 (372)
T ss_dssp CSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSS-SCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred CCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCC-CCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 3578999999999432 3 599999998642 2223356677888888998887653
No 117
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.33 E-value=2.5e-12 Score=99.24 Aligned_cols=69 Identities=20% Similarity=0.292 Sum_probs=62.3
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
.|+.|..+.|+|||+++||++ ||+|++|||++|.++.|+.+++...++|++++++|.|+|+.+++.+++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCT-----------TCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 577888888888999999999 999999999999999999999887678999999999999988887764
No 118
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.32 E-value=3.7e-12 Score=100.00 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=64.8
Q ss_pred EEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECC--eEEEEEEEee
Q 015960 313 VIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGT--QLEEILIILE 390 (397)
Q Consensus 313 ~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~l~ 390 (397)
+|.+|.++|||+++||++ ||+|++|||++|.++.|+.+++....+++++.++|.|+| ..+++.+++.
T Consensus 5 ~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAP-----------GTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp BEEEECTTSHHHHTTCCT-----------TCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred EEEeeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 688999999999999999 999999999999999999999987666789999999987 5688899998
Q ss_pred eCCCC
Q 015960 391 VEPDE 395 (397)
Q Consensus 391 ~~~~~ 395 (397)
.++.+
T Consensus 74 ~~~~~ 78 (95)
T 3id1_A 74 HWAFE 78 (95)
T ss_dssp TCCCC
T ss_pred ccccC
Confidence 87643
No 119
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.32 E-value=1.3e-11 Score=111.96 Aligned_cols=176 Identities=14% Similarity=0.083 Sum_probs=96.1
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEc---CCCEEEEcccccCCC------CeEEEEec--CC----cEEEEEEE
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWD---EDGHIVTNHHVIEGA------SSVKVTLF--DK----TTLDAKVV 155 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~---~~G~ILT~aHvv~~~------~~i~V~~~--~g----~~~~a~vv 155 (397)
-|.+++|.... ......|+|.+|+ ++ ||||||||+.+. ..+.+... +. ..+.++-+
T Consensus 6 ~p~~g~l~~~~--------~~~~~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~ 76 (218)
T 3cp7_A 6 SPHIGKVFFST--------NQGDFVCSANIVASANQS-TVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEEL 76 (218)
T ss_dssp CTTEEEEEEEE--------TTEEEEEEEEEBCCTTSC-EEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEE
T ss_pred CceEEEEEEEc--------CCCCeEEEEEEEecCCCC-EEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEE
Confidence 35677775421 1123479999998 77 999999999653 24455442 11 13344333
Q ss_pred EEc--------CCCCeEEEEEcCC--C---CCcc-eeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCC
Q 015960 156 GHD--------QGTDLAVLHIDAP--N---HKLR-SIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITAT 221 (397)
Q Consensus 156 ~~d--------~~~DlAlL~v~~~--~---~~~~-~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~ 221 (397)
..+ ..+||||||++.+ . ..+. ++++... ...|+.+.+.|||.........-..+.. .......
T Consensus 77 ~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~l~~C~~-~~~~~~~ 153 (218)
T 3cp7_A 77 VTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQELHSCHG-TATNDPM 153 (218)
T ss_dssp EECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSSCEEEEE-ECEECTT
T ss_pred EECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCceeeEeee-eEEcCCC
Confidence 332 3579999999986 1 1133 5555432 2578999999999642110000000100 0000000
Q ss_pred CCCcccEEEEccccCCCCcccceecC---CccEEEEEeeeeccCCCccCceeeEec-cchhHHHHHH
Q 015960 222 GPPIQGLIQIDAAINRGNSGGPLLDS---SGSLIGVNTSIITRTDAFCGMACSIPI-DTVSGIVDQL 284 (397)
Q Consensus 222 ~~~~~~~i~~~~~i~~G~SGGPlvn~---~G~vVGI~s~~~~~~~~~~~~~~aip~-~~i~~~~~~l 284 (397)
. .....+.++.+.|+|||||+.. .++++||+|++.... ....|+... +.++.++++.
T Consensus 154 ~---~~~~~~~Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~gc~---~~~~~~p~~~~~~~~l~~~a 214 (218)
T 3cp7_A 154 G---SSTQGIPCNMTGGSSGGPWFLGNGTGGAQNSTNSYGYTFL---PNVMFGPYFGSGAQQNYNYA 214 (218)
T ss_dssp S---SSCEEEECCCCTTCTTCEEEESSSSSSCEEEECCEEETTE---EEEEEECCCCHHHHHHHHHH
T ss_pred C---CceEEecCCCCCCCcCCeeEEccCCCeEEEEEEccccCCC---CCcEEcCcCCHHHHHHHHHH
Confidence 0 1112223445789999999954 378999999986432 112333222 4455555554
No 120
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.32 E-value=6.5e-11 Score=114.74 Aligned_cols=171 Identities=9% Similarity=0.113 Sum_probs=107.2
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCC-----------eEEEEecCCcEEEEEEEEEcC---CCCeEEEEEcCC---CCCc
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGAS-----------SVKVTLFDKTTLDAKVVGHDQ---GTDLAVLHIDAP---NHKL 175 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~-----------~i~V~~~~g~~~~a~vv~~d~---~~DlAlL~v~~~---~~~~ 175 (397)
...|.|.+|+++ ||||||||+.... ...+.....+.+..+-+..++ .+||||||++.+ ...+
T Consensus 125 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~~~v 203 (347)
T 4f4o_C 125 NLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIFHPDNSTVDIGLIKLKQKVPVNERV 203 (347)
T ss_dssp CCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEECSCTTTCCCEEEEESSCCCCSSSC
T ss_pred CEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEECcCCCCCCEEEEEECCCccCCCce
Confidence 457999999987 9999999996321 233444455566666556665 469999999886 3467
Q ss_pred ceeecCCCCCCCCCCeEEEEecCCCCCC----ceeeeEEeeccccc---cCC---------------CC-CCcccEEEE-
Q 015960 176 RSIPVGVSANLRIGQKVYAIGHPLGRKF----TCTAGIISAFGLEP---ITA---------------TG-PPIQGLIQI- 231 (397)
Q Consensus 176 ~~~~l~~s~~~~~G~~V~~iG~p~g~~~----~~~~G~vs~~~~~~---~~~---------------~~-~~~~~~i~~- 231 (397)
.++.|........|...++.||...... ......+.-+.... ... .. ......+..
T Consensus 204 ~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG 283 (347)
T 4f4o_C 204 MPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAG 283 (347)
T ss_dssp CCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEEC
T ss_pred eeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEec
Confidence 8888876666788999999999754321 11222221111110 000 00 001223333
Q ss_pred ----ccccCCCCcccceec---CCcc--EEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 ----DAAINRGNSGGPLLD---SSGS--LIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 ----~~~i~~G~SGGPlvn---~~G~--vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+- .+|+ ++||+|++.... ....+...-+...++|+++.+.
T Consensus 284 ~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~--~~~pgVYTrVs~y~~WI~~~i~ 345 (347)
T 4f4o_C 284 LSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCR--TAEYGVYVRVTSILDWIQTTIA 345 (347)
T ss_dssp CCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTT--TSSCEEEEEHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCC--CCCCeEEEEHHHHHHHHHHHHH
Confidence 234689999999972 2343 899999985432 2234666677788888888764
No 121
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.31 E-value=2.3e-11 Score=119.95 Aligned_cols=174 Identities=14% Similarity=0.110 Sum_probs=107.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC----CeEEEEecC-----------CcEEEEEEEEEcC-------CCCeEEEEEcC
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA----SSVKVTLFD-----------KTTLDAKVVGHDQ-------GTDLAVLHIDA 170 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~----~~i~V~~~~-----------g~~~~a~vv~~d~-------~~DlAlL~v~~ 170 (397)
...|.|.+|+++ ||||||||+.+. ..+.|++.. .+.+..+-+..++ .+|||||+++.
T Consensus 161 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~ 239 (394)
T 2b9l_A 161 QLVCGGSLIAPS-VVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDR 239 (394)
T ss_dssp SEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESS
T ss_pred ceEeeEEEEeCC-EEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecC
Confidence 457999999987 999999999753 457777642 1234444444444 36999999998
Q ss_pred C---CCCcceeecCCCCCCCCCCeEEEEecCCCCC-------CceeeeEEeeccccc---cC-C--CC---CCcccEEEE
Q 015960 171 P---NHKLRSIPVGVSANLRIGQKVYAIGHPLGRK-------FTCTAGIISAFGLEP---IT-A--TG---PPIQGLIQI 231 (397)
Q Consensus 171 ~---~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~-------~~~~~G~vs~~~~~~---~~-~--~~---~~~~~~i~~ 231 (397)
+ ...+.++.|........+..+++.||..... .......+.-+.... .. . .+ ......+..
T Consensus 240 pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCA 319 (394)
T 2b9l_A 240 PLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCA 319 (394)
T ss_dssp CCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEE
T ss_pred ccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEe
Confidence 6 2357788886544455678899999975321 112222222211111 00 0 00 001233433
Q ss_pred ----ccccCCCCcccceecC----Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhcc
Q 015960 232 ----DAAINRGNSGGPLLDS----SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKFG 288 (397)
Q Consensus 232 ----~~~i~~G~SGGPlvn~----~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~g 288 (397)
....|.|||||||+-. +| .++||+|++.. .+.....+...-+...++|+++.++..
T Consensus 320 g~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYT~V~~y~~WI~~~i~~~ 385 (394)
T 2b9l_A 320 GGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG-CGDENVPGVYANVAHFRNWIDQEMQAK 385 (394)
T ss_dssp CCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC-CCBSSSCEEEEEGGGGHHHHHHHHHHT
T ss_pred eCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHHhc
Confidence 2457899999999842 23 58999999854 222233566678888899998877643
No 122
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.28 E-value=8.1e-11 Score=112.59 Aligned_cols=182 Identities=16% Similarity=0.070 Sum_probs=112.0
Q ss_pred cCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecC------CcEEEEEEEEEcC----
Q 015960 90 NLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD------KTTLDAKVVGHDQ---- 159 (397)
Q Consensus 90 ~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~------g~~~~a~vv~~d~---- 159 (397)
.-|-.|.|... .....++|.+|+++ ||||+|||+.+...+.|++.. .+.+..+-+..++
T Consensus 104 ~~Pw~v~l~~~----------~~~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~ 172 (317)
T 3h5c_B 104 DLPWQVKLTNS----------EGKDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDA 172 (317)
T ss_dssp CCTTEEEEECS----------SSCEEEEEEEEETT-EEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBT
T ss_pred CCCcEEEEecc----------CCceeeeeEEeeCC-EEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCC
Confidence 35667777531 23457999999987 999999999877777887742 3445555555554
Q ss_pred ---CCCeEEEEEcCCC---CCcceeecCCCC----CCCCCCeEEEEecCCCCC---CceeeeEEeecc---ccccCCCCC
Q 015960 160 ---GTDLAVLHIDAPN---HKLRSIPVGVSA----NLRIGQKVYAIGHPLGRK---FTCTAGIISAFG---LEPITATGP 223 (397)
Q Consensus 160 ---~~DlAlL~v~~~~---~~~~~~~l~~s~----~~~~G~~V~~iG~p~g~~---~~~~~G~vs~~~---~~~~~~~~~ 223 (397)
.+|||||+++.+- ..+.++.|.... .+..|+.+++.||..... .......+.-+. ...... ..
T Consensus 173 ~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~-~~ 251 (317)
T 3h5c_B 173 DAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLN-VT 251 (317)
T ss_dssp TTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHT-CC
T ss_pred CCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhc-Cc
Confidence 4699999999862 356777775432 357899999999975211 111222222111 111100 00
Q ss_pred CcccEEEE--ccccCCCCcccceecC-Ccc--EEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 224 PIQGLIQI--DAAINRGNSGGPLLDS-SGS--LIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 224 ~~~~~i~~--~~~i~~G~SGGPlvn~-~G~--vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
.....+.. ....+.|+|||||+-. +|+ |+||++++. .......+....+....+|+++.+
T Consensus 252 ~~~~~~Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~--~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 252 VTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp CCTTEEEEECSCCCCCCCTTCEEEEEETTEEEEEEEECCCC--SSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred CCCceeECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEECC--CCCCCcceEEEEhHHhHHHHHHHh
Confidence 01222322 2334678999999954 454 999998753 222233556677888888888754
No 123
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.28 E-value=8.7e-11 Score=116.16 Aligned_cols=172 Identities=14% Similarity=0.138 Sum_probs=106.0
Q ss_pred ceeEEEEEcCCCEEEEcccccCC----CCeEEEEecC-------CcEEEEEEEEEcC--------CCCeEEEEEcCCC--
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG----ASSVKVTLFD-------KTTLDAKVVGHDQ--------GTDLAVLHIDAPN-- 172 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~----~~~i~V~~~~-------g~~~~a~vv~~d~--------~~DlAlL~v~~~~-- 172 (397)
..|+|.+|+++ ||||||||+.+ ...+.|++.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 183 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~ 261 (403)
T 1zjk_A 183 TTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI 261 (403)
T ss_dssp CCEEEEEETTT-EEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCC
T ss_pred CceEEEEecCC-EEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcC
Confidence 36999999987 99999999964 4567777642 2344444444443 4699999999862
Q ss_pred -CCcceeecCCCCC---CCCCCeEEEEecCCCCC----CceeeeEEeecccc---ccCCC-----CCCcccEEEE-----
Q 015960 173 -HKLRSIPVGVSAN---LRIGQKVYAIGHPLGRK----FTCTAGIISAFGLE---PITAT-----GPPIQGLIQI----- 231 (397)
Q Consensus 173 -~~~~~~~l~~s~~---~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~~---~~~~~-----~~~~~~~i~~----- 231 (397)
..+.++.|..... +..|+.+++.||..... .......+.-+... ..... .......+..
T Consensus 262 ~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~ 341 (403)
T 1zjk_A 262 NSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESG 341 (403)
T ss_dssp BTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSC
T ss_pred CCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCC
Confidence 3567777764332 56799999999985432 12222222222111 11100 0111234443
Q ss_pred ccccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 DAAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 ~~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+-. +| .|+||+|++....+.....+....+....+|+++.++
T Consensus 342 ~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 401 (403)
T 1zjk_A 342 GKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 401 (403)
T ss_dssp CTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHHT
T ss_pred CCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 2457899999999853 34 4899999984333222335677888888899888654
No 124
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.28 E-value=6.8e-11 Score=113.82 Aligned_cols=169 Identities=15% Similarity=0.145 Sum_probs=101.9
Q ss_pred ceeEEEEEcCCCEEEEcccccCC-------CCeEEEEecCC--------cEEEEEEEEEcC----------CCCeEEEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEG-------ASSVKVTLFDK--------TTLDAKVVGHDQ----------GTDLAVLHI 168 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~-------~~~i~V~~~~g--------~~~~a~vv~~d~----------~~DlAlL~v 168 (397)
..|.|.+|+++ ||||||||+.. ...+.|.+..- ..+..+-+..++ .+|||||++
T Consensus 111 ~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L 189 (329)
T 1md8_A 111 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189 (329)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEE
T ss_pred CCcceEEecCC-EEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEEEE
Confidence 46999999987 99999999963 23455665421 122333333332 359999999
Q ss_pred cCCC---CCcceeecCCCCC-CCCCCeEEEEecCCCCC---CceeeeEEeeccccccC-----C--CCCCcccEEEE---
Q 015960 169 DAPN---HKLRSIPVGVSAN-LRIGQKVYAIGHPLGRK---FTCTAGIISAFGLEPIT-----A--TGPPIQGLIQI--- 231 (397)
Q Consensus 169 ~~~~---~~~~~~~l~~s~~-~~~G~~V~~iG~p~g~~---~~~~~G~vs~~~~~~~~-----~--~~~~~~~~i~~--- 231 (397)
+.+- ..+.|+.|..... ...|..+++.||..... .......+.-+...... . ........+..
T Consensus 190 ~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~ 269 (329)
T 1md8_A 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 269 (329)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecC
Confidence 9862 3567788865433 36789999999975332 12222222222111100 0 00001233443
Q ss_pred --ccccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 --DAAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 --~~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+-. ++ .++||+|++.... . +.+...-+....+|+++.++
T Consensus 270 ~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~-~--~~gvyT~V~~y~~WI~~~i~ 328 (329)
T 1md8_A 270 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS-R--GYGFYTKVLNYVDWIKKEME 328 (329)
T ss_dssp TCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSS-S--SCEEEEEGGGTHHHHHHHHH
T ss_pred CCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcC-C--CCcEEEEHHHHHHHHHHHHh
Confidence 2457899999999852 23 4899999986432 1 34667788888888887654
No 125
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.28 E-value=1.3e-12 Score=109.90 Aligned_cols=95 Identities=23% Similarity=0.235 Sum_probs=69.4
Q ss_pred hccccccccCCCchhH----HH-HHHc----CCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--
Q 015960 286 KFGKIIRPYLGIAHDQ----LL-EKLM----GISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS-- 354 (397)
Q Consensus 286 ~~g~~~~~~lGi~~~~----~~-~~~~----~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~-- 354 (397)
+.+++.++++|+.... .. .+.+ ...|++|..|.++|||+++||++ ||+|++|||++|.
T Consensus 31 ~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 31 KLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDMTMV 99 (139)
T ss_dssp CEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTC
T ss_pred EcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEEcCCC
Confidence 4556666777774311 00 0111 13689999999999999999999 9999999999999
Q ss_pred CHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeeeC
Q 015960 355 NANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEVE 392 (397)
Q Consensus 355 ~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 392 (397)
++.++..++.. .+|+++.|+|.|+|+..++++.+...
T Consensus 100 ~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~~ 136 (139)
T 2vz5_A 100 THDQARKRLTK-RSEEVVRLLVTRQSLQKAVQQSMLSE 136 (139)
T ss_dssp CHHHHHHHHCC-TTCSEEEEEEEECC-------CCCCC
T ss_pred CHHHHHHHHHh-CCCCEEEEEEEECCEEEEEEEeecee
Confidence 58999999987 78999999999999998888877654
No 126
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.27 E-value=4.1e-11 Score=105.60 Aligned_cols=161 Identities=17% Similarity=0.142 Sum_probs=100.5
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEcCCC--EEEEcccccCCCCeEEEEecCCcEEE-----EEEEEEcCCCCe
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDG--HIVTNHHVIEGASSVKVTLFDKTTLD-----AKVVGHDQGTDL 163 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G--~ILT~aHvv~~~~~i~V~~~~g~~~~-----a~vv~~d~~~Dl 163 (397)
..+||.|... . ...|.|+.+..+| ++|||+||+.+.........+++.++ ..+...|+..|+
T Consensus 15 P~svv~l~~~----------d-~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k~g~~ip~~~~~~~~~~~d~~~D~ 83 (191)
T 1zyo_A 15 PASLVAIKSG----------P-TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKMLDF 83 (191)
T ss_dssp CSSEEEEEET----------T-EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEETTEEEECCSCEEEEEECCTTTCE
T ss_pred CCeEEEEEeC----------C-eEEEEEEEEEECCCcEEEEChhhCcCCcceeeecCCCCEEEcccceeeEccCCCCCcE
Confidence 3457888651 1 4578888886444 89999999977532222233555444 334445678999
Q ss_pred EEEEEcCCC---CCcceeecCCCCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCc
Q 015960 164 AVLHIDAPN---HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNS 240 (397)
Q Consensus 164 AlL~v~~~~---~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 240 (397)
||++++... .....+.+. ....++.|.++|+|.........|+.... .. ...+++++...+|.|
T Consensus 84 all~vp~~~~s~lg~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~~g~~~~~-------~~---~~~~~~~~~T~~G~S 150 (191)
T 1zyo_A 84 AIVRVPTHVWSKLGVKSTPLV---CPSSKDVITCYGGSSSDCLMSGVGSSSTS-------EF---TWKLTHTCPTAAGWS 150 (191)
T ss_dssp EEEECCHHHHHHHTCCCCCBC---CCCSCEEEEEEEESSTTSEEEEEEEEEEC-------SS---TTEEEECCCCCTTCT
T ss_pred EEEEcCCChhhhcCcceeEee---cCCCCccEEEEeecCCCCEeecccceeec-------cC---CcEEEEEcCCCCCCC
Confidence 999997531 113333342 23358999999998654433334422111 00 346888999999999
Q ss_pred ccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHH
Q 015960 241 GGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGI 280 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~ 280 (397)
|+|++|.+ .+|||+...... ...+.++-+..++.+
T Consensus 151 GsP~~ng~-~IVGvh~G~~~~----~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 151 GTPLYSSR-GVVGMHVGFEEI----GKLNRGVNMFYVANY 185 (191)
T ss_dssp TCEEECSS-CEEEEEEEEEET----TTEEEEECHHHHHHH
T ss_pred CCcEEcCC-eEEEEEeCcccC----CceeeeeehHHHhhh
Confidence 99999975 789999876431 235666655555443
No 127
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.25 E-value=5e-11 Score=111.27 Aligned_cols=147 Identities=15% Similarity=0.136 Sum_probs=84.0
Q ss_pred HcCCceEEEEeeeccccccccCCCCceeEEEEEcCC-----CEEEEcccccCCC----CeEEEEecCC------------
Q 015960 89 ENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDED-----GHIVTNHHVIEGA----SSVKVTLFDK------------ 147 (397)
Q Consensus 89 ~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~-----G~ILT~aHvv~~~----~~i~V~~~~g------------ 147 (397)
.++.||++|... ....|+|++|+++ .||||||||+.+. ..++|.+...
T Consensus 20 ~~~~aV~rl~~~-----------g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~~ 88 (268)
T 1arb_A 20 DIIRAVGAYSKS-----------GTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPAS 88 (268)
T ss_dssp TGGGGEEEEEET-----------TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGG
T ss_pred HhhceEEEEEeC-----------CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCcccccccccc
Confidence 567889998631 2357999999972 4999999999752 2455555210
Q ss_pred ---------c-EEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCce----------ee
Q 015960 148 ---------T-TLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFTC----------TA 207 (397)
Q Consensus 148 ---------~-~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~~----------~~ 207 (397)
. .....+++....+||||||++.+. ..+..+++.||........ ..
T Consensus 89 ~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v--------------~~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l 154 (268)
T 1arb_A 89 GANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA--------------NPAFNLFWAGWDRRDQNYPGAIAIHHPNVAE 154 (268)
T ss_dssp GSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC--------------CGGGCCEEBCEECCSCCCSCEEEEECGGGCS
T ss_pred ccccCCcceEEeccceEecCCCCCceEEEEecCCC--------------CCCCceEEeCcCccCCCCCcceeeccCCccc
Confidence 1 122344455678999999998842 1133455566643211100 00
Q ss_pred eEEeecccccc-CCCCCCc-ccEEEEc-----cccCCCCcccceecCCccEEEEEeeeec
Q 015960 208 GIISAFGLEPI-TATGPPI-QGLIQID-----AAINRGNSGGPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 208 G~vs~~~~~~~-~~~~~~~-~~~i~~~-----~~i~~G~SGGPlvn~~G~vVGI~s~~~~ 260 (397)
-.++....... ...+..+ ...+... ...|.|+|||||+..+++++||++++..
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~~ 214 (268)
T 1arb_A 155 KRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPS 214 (268)
T ss_dssp CEEEEECSCCEEECTTSSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECSC
T ss_pred EEEEeeccccccccccccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecCc
Confidence 11111110000 0001001 2334331 1478999999999878899999999853
No 128
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.24 E-value=1.8e-10 Score=110.95 Aligned_cols=168 Identities=14% Similarity=0.110 Sum_probs=101.0
Q ss_pred eeEEEEEcCCCEEEEcccccCCCCeEEEEecC-------CcEEEE---EEEEEcC--------------CCCeEEEEEcC
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD-------KTTLDA---KVVGHDQ--------------GTDLAVLHIDA 170 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~-------g~~~~a---~vv~~d~--------------~~DlAlL~v~~ 170 (397)
.|.|.+|+++ ||||||||+.+.....|++.. ...+.. +-+..++ .+|||||+++.
T Consensus 104 ~CgGsLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~ 182 (333)
T 1elv_A 104 WAGGALINEY-WVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKD 182 (333)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESS
T ss_pred ceeEEEecCC-EEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCC
Confidence 7999999987 999999999876544555432 112222 3222322 46999999998
Q ss_pred CC---CCcceeecCCCCC---CCCCCeEEEEecCCCCCC----ceeeeEEeeccccc---cCCC-------C-CCcccEE
Q 015960 171 PN---HKLRSIPVGVSAN---LRIGQKVYAIGHPLGRKF----TCTAGIISAFGLEP---ITAT-------G-PPIQGLI 229 (397)
Q Consensus 171 ~~---~~~~~~~l~~s~~---~~~G~~V~~iG~p~g~~~----~~~~G~vs~~~~~~---~~~~-------~-~~~~~~i 229 (397)
+- ..+.++.|..... +..|+.+++.||...... ......+.-+.... .... . ......+
T Consensus 183 ~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~ 262 (333)
T 1elv_A 183 PVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMI 262 (333)
T ss_dssp CCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEE
T ss_pred CCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeE
Confidence 62 3567777764332 456999999999754221 12222222211111 0000 0 0012234
Q ss_pred EE----ccccCCCCcccceecC---Cc---cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 230 QI----DAAINRGNSGGPLLDS---SG---SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 230 ~~----~~~i~~G~SGGPlvn~---~G---~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
.. ....|.|||||||+-. +| .++||+|++... +. .+....+.....|+++.++.
T Consensus 263 Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C-~~---~~vyt~V~~y~~WI~~~~~~ 326 (333)
T 1elv_A 263 CAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQC-GT---YGLYTRVKNYVDWIMKTMQE 326 (333)
T ss_dssp EEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSST-TS---EEEEEEGGGGHHHHHHHHHH
T ss_pred CccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCC-CC---CcEEeEHHHHHHHHHHHHhc
Confidence 33 2357899999999853 23 499999998532 22 46777888889999887653
No 129
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.24 E-value=2.5e-10 Score=113.03 Aligned_cols=172 Identities=12% Similarity=0.130 Sum_probs=105.1
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC--CeEEEEecCC---------------------cEEEEEEEEEcC-------CCCe
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA--SSVKVTLFDK---------------------TTLDAKVVGHDQ-------GTDL 163 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~--~~i~V~~~~g---------------------~~~~a~vv~~d~-------~~Dl 163 (397)
..|.|.+|+++ ||||||||+.+. ..+.|++..- ..+..+-+..++ .+||
T Consensus 146 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDI 224 (408)
T 2xxl_A 146 FLCGGAMISER-YILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224 (408)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCC
T ss_pred EEEEEEEEECC-EEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccce
Confidence 47999999987 999999999754 4667776421 123333333443 4699
Q ss_pred EEEEEcCCC---CCcceeecCCCCC----CCCCCeEEEEecCCCCC----CceeeeEEeecc---ccccCCCCCCcccEE
Q 015960 164 AVLHIDAPN---HKLRSIPVGVSAN----LRIGQKVYAIGHPLGRK----FTCTAGIISAFG---LEPITATGPPIQGLI 229 (397)
Q Consensus 164 AlL~v~~~~---~~~~~~~l~~s~~----~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~---~~~~~~~~~~~~~~i 229 (397)
|||+++.+- ..+.|+.|..... ...|..+++.||..... .......+.-+. .......... ...+
T Consensus 225 ALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~-~~~i 303 (408)
T 2xxl_A 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAVP-LSQL 303 (408)
T ss_dssp EEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEEEEEEECHHHHHHHHTSCCC-TTEE
T ss_pred EEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEeeeeecCHHHHHHHhcccCC-CceE
Confidence 999999862 3567787764332 46789999999975322 112222222111 1111100001 1334
Q ss_pred EE----ccccCCCCcccce------ecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHhc
Q 015960 230 QI----DAAINRGNSGGPL------LDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVKF 287 (397)
Q Consensus 230 ~~----~~~i~~G~SGGPl------vn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~~ 287 (397)
.. ....|.||||||| +.. +| .++||+|++....+.....+...-+....+|+++.++.
T Consensus 304 CAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~~ 374 (408)
T 2xxl_A 304 CVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMAS 374 (408)
T ss_dssp EECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHHH
T ss_pred eecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence 33 2356899999999 532 33 68999999843333223356677888888999887654
No 130
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.23 E-value=4.1e-10 Score=105.20 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=109.1
Q ss_pred CCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCC---CeEEEEec---------CCcEEEEEEEEEc
Q 015960 91 LPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLF---------DKTTLDAKVVGHD 158 (397)
Q Consensus 91 ~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~---------~g~~~~a~vv~~d 158 (397)
-|-.|.|.....+ ......|.|.+|+++ ||||||||+.+. ..+.|.+. .+..+..+-+..+
T Consensus 35 ~Pw~v~l~~~~~~------~~~~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~H 107 (276)
T 2vnt_A 35 QPWFAAIYRRHRG------GSVTYVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILH 107 (276)
T ss_dssp STTEEEEEEECSS------SCEEEEEEEEEEETT-EEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEEC
T ss_pred CCcEEEEEEecCC------CcceeEEEEEEeeCC-EEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEEEEc
Confidence 4666777543210 111247999999987 999999999653 33455542 1234455444444
Q ss_pred C---------CCCeEEEEEcCC-------CCCcceeecCCC-CCCCCCCeEEEEecCCCCCC------ceee---eEEee
Q 015960 159 Q---------GTDLAVLHIDAP-------NHKLRSIPVGVS-ANLRIGQKVYAIGHPLGRKF------TCTA---GIISA 212 (397)
Q Consensus 159 ~---------~~DlAlL~v~~~-------~~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~~------~~~~---G~vs~ 212 (397)
+ ..|||||+++.+ ...+.++.|... ..+..|..+.+.||...... .... -++..
T Consensus 108 p~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i~~~ 187 (276)
T 2vnt_A 108 KDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISH 187 (276)
T ss_dssp TTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECH
T ss_pred cccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeEecH
Confidence 3 369999999753 234567777543 34677899999998754221 1111 12221
Q ss_pred ccccccCCCC-CCcccEEEE-----ccccCCCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHH
Q 015960 213 FGLEPITATG-PPIQGLIQI-----DAAINRGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQ 283 (397)
Q Consensus 213 ~~~~~~~~~~-~~~~~~i~~-----~~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~ 283 (397)
..+....... ......+.. ....|.|||||||+-. +| .++||+|++.... .....+...-+...++|+++
T Consensus 188 ~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~-~~~~P~vyt~V~~y~~WI~~ 266 (276)
T 2vnt_A 188 RECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCA-LKDKPGVYTRVSHFLPWIRS 266 (276)
T ss_dssp HHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSS-BTTBCEEEEEGGGGHHHHHH
T ss_pred HHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCC-CCCCCEEEEEHHHHHHHHHH
Confidence 1111111000 001122222 2346899999999843 33 3999999985432 22234566778888999988
Q ss_pred HHhc
Q 015960 284 LVKF 287 (397)
Q Consensus 284 l~~~ 287 (397)
.++.
T Consensus 267 ~~~~ 270 (276)
T 2vnt_A 267 HTKE 270 (276)
T ss_dssp HHSC
T ss_pred Hhhh
Confidence 7753
No 131
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.19 E-value=3.2e-11 Score=93.61 Aligned_cols=69 Identities=22% Similarity=0.269 Sum_probs=62.5
Q ss_pred cEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEeee
Q 015960 312 GVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIILEV 391 (397)
Q Consensus 312 ~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 391 (397)
++|..+.++|||+++||++ ||+|++|||+++.++.++...+... +|+++.++|.|+|+.+++.+++..
T Consensus 6 ~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQA-----------GDRIVXVDGQPLTQWVTFVMLVRDN-PGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp CBCSEECTTSHHHHTTCCT-----------TCEEEEETTEECCCHHHHHHHHHHC-TTCCEEEEEEETTEEEEEEECCEE
T ss_pred eEEEEECCCChHHhcCCCC-----------CCEEEEECCeEcCCHHHHHHHHhcC-CCCeEEEEEEECCeEEEEEEEEee
Confidence 4678899999999999999 9999999999999999999999874 788999999999999888888754
Q ss_pred C
Q 015960 392 E 392 (397)
Q Consensus 392 ~ 392 (397)
.
T Consensus 74 ~ 74 (91)
T 2zpm_A 74 X 74 (91)
T ss_dssp E
T ss_pred e
Confidence 3
No 132
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.18 E-value=3.2e-10 Score=111.86 Aligned_cols=169 Identities=15% Similarity=0.141 Sum_probs=100.1
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC-------CeEEEEecCC--------cEEEEEEEEEcC----------CCCeEEEEE
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA-------SSVKVTLFDK--------TTLDAKVVGHDQ----------GTDLAVLHI 168 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~-------~~i~V~~~~g--------~~~~a~vv~~d~----------~~DlAlL~v 168 (397)
+.|.|.+|+++ ||||||||+.+. ..+.|.+..- ..+..+-+..++ .+|||||++
T Consensus 179 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 257 (399)
T 1gpz_A 179 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 257 (399)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEEE
T ss_pred CCeEEEEeCCC-EEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEEE
Confidence 46999999987 999999999743 2356665421 122333333333 359999999
Q ss_pred cCCC---CCcceeecCCCCC-CCCCCeEEEEecCCCCC---CceeeeEEeeccccc---cCCC----CCCcccEEEE---
Q 015960 169 DAPN---HKLRSIPVGVSAN-LRIGQKVYAIGHPLGRK---FTCTAGIISAFGLEP---ITAT----GPPIQGLIQI--- 231 (397)
Q Consensus 169 ~~~~---~~~~~~~l~~s~~-~~~G~~V~~iG~p~g~~---~~~~~G~vs~~~~~~---~~~~----~~~~~~~i~~--- 231 (397)
+.+- ..+.++.|..... ...|..+++.||..... .......+.-+.... .... .......+..
T Consensus 258 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~ 337 (399)
T 1gpz_A 258 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 337 (399)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECG
T ss_pred CCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccC
Confidence 9862 3577888865433 35789999999975321 122222222211111 0000 0001223433
Q ss_pred --ccccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 232 --DAAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 232 --~~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....|.|||||||+-. ++ .++||+|++..... +.+....+....+|+++.++
T Consensus 338 ~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~---~~~vyt~V~~y~~WI~~~~~ 396 (399)
T 1gpz_A 338 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR---GYGFYTKVLNYVDWIKKEME 396 (399)
T ss_dssp GGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTT---TEEEEEEGGGGHHHHHHHTC
T ss_pred CCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCC---CCeEEEEhHHhHHHHHHHhc
Confidence 2357899999999842 33 48999999854321 34677788888888887654
No 133
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=115.43 Aligned_cols=172 Identities=10% Similarity=0.080 Sum_probs=103.4
Q ss_pred CceeEEEEEcCCCEEEEcccccC--------CCCeEEEEecC----------CcEEEEEEEEEcC--------CCCeEEE
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIE--------GASSVKVTLFD----------KTTLDAKVVGHDQ--------GTDLAVL 166 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~--------~~~~i~V~~~~----------g~~~~a~vv~~d~--------~~DlAlL 166 (397)
...|+|.||+++ ||||||||+. ....+.|++.. .+.+..+-+..++ .+|||||
T Consensus 190 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~~nDIALL 268 (424)
T 3nxp_A 190 ELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALM 268 (424)
T ss_dssp EEEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEEEEECTTCBTTTTSBTCCEEE
T ss_pred CccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEEEEeCCCCCCCCCCcCCeEEE
Confidence 347999999987 9999999984 23456777642 1223333333333 3599999
Q ss_pred EEcCC---CCCcceeecCCCCC----CCCCCeEEEEecCCC---------C--CCceeeeEEeeccccccC--CCCCCcc
Q 015960 167 HIDAP---NHKLRSIPVGVSAN----LRIGQKVYAIGHPLG---------R--KFTCTAGIISAFGLEPIT--ATGPPIQ 226 (397)
Q Consensus 167 ~v~~~---~~~~~~~~l~~s~~----~~~G~~V~~iG~p~g---------~--~~~~~~G~vs~~~~~~~~--~~~~~~~ 226 (397)
+++.+ ...+.++.|..... +..|..+.+.||... . ........+.-+...... .......
T Consensus 269 kL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~i~~ 348 (424)
T 3nxp_A 269 KLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITD 348 (424)
T ss_dssp EESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEEEEEBCCHHHHHHTCSSCCCT
T ss_pred EecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEEEeeEEcHHHhhhhccCcCCC
Confidence 99876 23567777754321 357899999999731 1 112222223222211100 0001112
Q ss_pred cEEEEc--------cccCCCCcccceecC---Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 227 GLIQID--------AAINRGNSGGPLLDS---SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 227 ~~i~~~--------~~i~~G~SGGPlvn~---~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
..+... ...|.|||||||+-. +| .|+||+|++... +.....+....+....+|+++.++
T Consensus 349 ~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C-~~~~~pgVyT~Vs~y~~WI~~~i~ 420 (424)
T 3nxp_A 349 NMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGC-DRDGKYGFYTHVFRLKKWIQKVID 420 (424)
T ss_dssp TEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCT-TTCCSCEEEEECTTCHHHHHHHHH
T ss_pred CeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCC-CCCCCCEEEEEHHHHHHHHHHHHH
Confidence 344431 257899999999843 34 589999998543 222335677888888888887654
No 134
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.16 E-value=1.1e-09 Score=116.54 Aligned_cols=172 Identities=15% Similarity=0.145 Sum_probs=105.4
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC-CCCeEEEEEcCC---CCCcc
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ-GTDLAVLHIDAP---NHKLR 176 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~-~~DlAlL~v~~~---~~~~~ 176 (397)
...++|.||+++ ||||||||+.+. ..+.|.+.. .+.+...-+..++ ..|||||+++.+ ...+.
T Consensus 585 ~~~CGGSLIs~~-wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s~~V~ 663 (791)
T 4dur_A 585 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 663 (791)
T ss_dssp CEEEEEEEEETT-EEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEEeCC-EEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccCCcee
Confidence 457999999987 999999999753 356666632 1234443334443 579999999876 23567
Q ss_pred eeecCCCC-CCCCCCeEEEEecCCCCC----CceeeeEEeeccccc---c-CCCCCCcccEEEE-----ccccCCCCccc
Q 015960 177 SIPVGVSA-NLRIGQKVYAIGHPLGRK----FTCTAGIISAFGLEP---I-TATGPPIQGLIQI-----DAAINRGNSGG 242 (397)
Q Consensus 177 ~~~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~~~---~-~~~~~~~~~~i~~-----~~~i~~G~SGG 242 (397)
++.|.... .+..|..+++.||..... .......+.-+.... . ...+......+.. ....+.|||||
T Consensus 664 PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGG 743 (791)
T 4dur_A 664 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGG 743 (791)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCccc
Confidence 77775433 356789999999975321 112222222221111 1 0011111233433 23568999999
Q ss_pred ceecCC-c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 243 PLLDSS-G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 243 Plvn~~-G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
||+-.+ | .|+||+|++.... .....+...-+.....+|++.++
T Consensus 744 PLv~~~~~~~~LvGIvS~G~gC~-~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 744 PLVCFEKDKYILQGVTSWGLGCA-RPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp EEEEEETTEEEEEEECCTTTCCB-BTTBCEEEEEGGGTHHHHHHHHH
T ss_pred ceEEEeCCeEEEEEEEEeCCCCC-CCCCCeEEEEHHHHHHHHHHHHH
Confidence 999532 2 4999999875422 12235677888888899888765
No 135
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=7.1e-12 Score=102.18 Aligned_cols=88 Identities=18% Similarity=0.185 Sum_probs=69.8
Q ss_pred HhccccccccC----CCchhHHHHHHcC-------CCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEec
Q 015960 285 VKFGKIIRPYL----GIAHDQLLEKLMG-------ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDV 353 (397)
Q Consensus 285 ~~~g~~~~~~l----Gi~~~~~~~~~~~-------~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v 353 (397)
+++|++.|+|+ |+.+.... ..++ ..|++|..|.+++||+++||++ ||+|++|||+++
T Consensus 7 ~~~g~v~r~~l~~~~~v~l~~~~-~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~Il~vng~~v 74 (117)
T 1uit_A 7 GGERRKDRPYVEEPRHVKVQKGS-EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEY-----------GDQLLEFNGINL 74 (117)
T ss_dssp CCCCCSCCCCSCCCEEEEEECSS-CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCT-----------TCEECEETTEET
T ss_pred cccCccccccCCCCEEEEEEeCC-CCccEEEEccCCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEEC
Confidence 45788888888 66433211 1111 2589999999999999999999 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 354 SNANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 354 ~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.++.++...+....+|+++.|+|.|+++..+
T Consensus 75 ~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~ 105 (117)
T 1uit_A 75 RSATEQQARLIIGQQCDTITILAQYNPHVHQ 105 (117)
T ss_dssp TTCCHHHHHHHTTSCCSEEEEEECCCSCCCC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEECCchhh
Confidence 9998887776555789999999999987654
No 136
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.10 E-value=4.9e-11 Score=92.36 Aligned_cols=72 Identities=15% Similarity=0.225 Sum_probs=60.8
Q ss_pred ccCCCchhHHHHHHcCCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCC
Q 015960 293 PYLGIAHDQLLEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGD 370 (397)
Q Consensus 293 ~~lGi~~~~~~~~~~~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~ 370 (397)
+++|+.... ...|++|..|.++|||+++||++ ||+|++|||+++ .++.++..++...++|+
T Consensus 17 ~~lG~~~~~------~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~ 79 (90)
T 2eaq_A 17 LDFGFTIKW------DIPGIFVASVEAGSPAEFSQLQV-----------DDEIIAINNTKFSYNDSKEWEEAMAKAQETG 79 (90)
T ss_dssp SCCSEEEEE------ETTEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECCTTCHHHHHHHHHHHHHHT
T ss_pred CcccEEEEe------cCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhcCCCC
Confidence 467774431 12689999999999999999999 999999999999 89999999987655789
Q ss_pred EEEEEEEECCe
Q 015960 371 EVIVRILRGTQ 381 (397)
Q Consensus 371 ~v~l~v~R~g~ 381 (397)
++.++|.|+|+
T Consensus 80 ~v~l~v~R~g~ 90 (90)
T 2eaq_A 80 HLVMDVRRYGK 90 (90)
T ss_dssp EEEEEEEEEC-
T ss_pred EEEEEEEeCCC
Confidence 99999999874
No 137
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.09 E-value=3.7e-10 Score=120.07 Aligned_cols=175 Identities=18% Similarity=0.155 Sum_probs=101.1
Q ss_pred CceeEEEEEcCCCEEEEcccccCC---CCeEEEEec-CCcEEEEEEEEEcC----------------CCCeEEEEEcCCC
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEG---ASSVKVTLF-DKTTLDAKVVGHDQ----------------GTDLAVLHIDAPN 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~---~~~i~V~~~-~g~~~~a~vv~~d~----------------~~DlAlL~v~~~~ 172 (397)
...|+|.+|+++ ||||||||+.. ...+.|.+. ..+.+..+-+..++ .+|||||+++.+-
T Consensus 483 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv 561 (741)
T 3hrz_D 483 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 561 (741)
T ss_dssp ---EEEEECSSS-EEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCC
T ss_pred CCEEEEEEecCC-EEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcC
Confidence 457999999987 99999999964 446777775 33455555444443 3599999998762
Q ss_pred ---CCcceeecCCCC------CCCCCCeEEEEecCCCCCCce------------eeeEEeecc------ccc--cCC--C
Q 015960 173 ---HKLRSIPVGVSA------NLRIGQKVYAIGHPLGRKFTC------------TAGIISAFG------LEP--ITA--T 221 (397)
Q Consensus 173 ---~~~~~~~l~~s~------~~~~G~~V~~iG~p~g~~~~~------------~~G~vs~~~------~~~--~~~--~ 221 (397)
..+.++.|.... .+..|..+.+.||........ ....+.-.. +.. ... .
T Consensus 562 ~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 641 (741)
T 3hrz_D 562 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 641 (741)
T ss_dssp CCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccceeEeecCcccchhhhhhhhcccc
Confidence 356777775321 245667666666653222111 111111110 000 000 0
Q ss_pred -------CCCcccEEEE-------ccccCCCCcccceecC-Cc--cEEEEEeeeec-cCCC---ccCc-----eeeEecc
Q 015960 222 -------GPPIQGLIQI-------DAAINRGNSGGPLLDS-SG--SLIGVNTSIIT-RTDA---FCGM-----ACSIPID 275 (397)
Q Consensus 222 -------~~~~~~~i~~-------~~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~-~~~~---~~~~-----~~aip~~ 275 (397)
.......+.. +...|.|||||||+-. +| .++||+|++.. ..+. .... ++...+.
T Consensus 642 ~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~ 721 (741)
T 3hrz_D 642 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 721 (741)
T ss_dssp TTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGG
T ss_pred ccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhH
Confidence 0011234444 2347899999999953 23 39999999862 2221 1222 6778888
Q ss_pred chhHHHHHHHhcc
Q 015960 276 TVSGIVDQLVKFG 288 (397)
Q Consensus 276 ~i~~~~~~l~~~g 288 (397)
..++|+++.++..
T Consensus 722 ~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 722 QVLPWLKEKLQDE 734 (741)
T ss_dssp GSHHHHHHHTTTS
T ss_pred HhHHHHHHHhcCC
Confidence 9999999987653
No 138
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.08 E-value=7.7e-11 Score=91.44 Aligned_cols=61 Identities=25% Similarity=0.323 Sum_probs=55.9
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHH--HHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAN--DLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~--d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++. ++..++.. +|+++.++|.|+++.+
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCI-----------GDVITAIDGENTSNMTHLEAQNRIKG--CTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccc
Confidence 478999999999999999999 9999999999999988 88888876 7899999999998754
No 139
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.08 E-value=4.8e-10 Score=113.59 Aligned_cols=176 Identities=18% Similarity=0.138 Sum_probs=100.9
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC-CcEEEEEEEEEcC----------------CCCeEEEEEcCCC
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD-KTTLDAKVVGHDQ----------------GTDLAVLHIDAPN 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~-g~~~~a~vv~~d~----------------~~DlAlL~v~~~~ 172 (397)
...|.|.+|+++ ||||+|||+... ..+.|.+.. .+.+..+-+..++ .+|||||+++.+-
T Consensus 241 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v 319 (497)
T 1rrk_A 241 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 319 (497)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCC
T ss_pred CceeEEEEecCC-EEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCC
Confidence 457999999987 999999999753 467787754 2444444443332 3599999999862
Q ss_pred ---CCcceeecCCCC------CCCCCCeEEEEecCCCC------------CCceee---eEEee---cccccc--C--CC
Q 015960 173 ---HKLRSIPVGVSA------NLRIGQKVYAIGHPLGR------------KFTCTA---GIISA---FGLEPI--T--AT 221 (397)
Q Consensus 173 ---~~~~~~~l~~s~------~~~~G~~V~~iG~p~g~------------~~~~~~---G~vs~---~~~~~~--~--~~ 221 (397)
..+.|+.|.... .+..|..+.+.||.... ...... -++.. ..+... . ..
T Consensus 320 ~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 399 (497)
T 1rrk_A 320 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 399 (497)
T ss_dssp CCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccc
Confidence 357788876432 23456555444442111 111111 12220 011100 0 00
Q ss_pred -------CCCcccEEEEc-------cccCCCCcccceecC-Cc--cEEEEEeeeec-cCC------CccCc--eeeEecc
Q 015960 222 -------GPPIQGLIQID-------AAINRGNSGGPLLDS-SG--SLIGVNTSIIT-RTD------AFCGM--ACSIPID 275 (397)
Q Consensus 222 -------~~~~~~~i~~~-------~~i~~G~SGGPlvn~-~G--~vVGI~s~~~~-~~~------~~~~~--~~aip~~ 275 (397)
.......+... ...|.|+|||||+-. +| .++||+|++.. .++ ...++ +...-+.
T Consensus 400 ~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~ 479 (497)
T 1rrk_A 400 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 479 (497)
T ss_dssp TTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGG
T ss_pred cccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHH
Confidence 00112345442 347999999999953 33 39999999863 222 11221 2556788
Q ss_pred chhHHHHHHHhccc
Q 015960 276 TVSGIVDQLVKFGK 289 (397)
Q Consensus 276 ~i~~~~~~l~~~g~ 289 (397)
...+|+++.++...
T Consensus 480 ~~~~WI~~~~~~~~ 493 (497)
T 1rrk_A 480 QVLPWLKEKLQDED 493 (497)
T ss_dssp GGHHHHHHHTTTSS
T ss_pred HHHHHHHHHhCccc
Confidence 88999988776543
No 140
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.06 E-value=1.8e-09 Score=112.61 Aligned_cols=171 Identities=16% Similarity=0.095 Sum_probs=96.0
Q ss_pred CceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC-
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN- 172 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~- 172 (397)
...++|.||+++ ||||||||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+-
T Consensus 413 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~ 491 (625)
T 2f83_A 413 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 491 (625)
T ss_dssp EEEEEEEECSSS-EEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCC
T ss_pred cEEEEEEEECCC-EEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCccc
Confidence 357999999987 999999999753 346666531 2234444444444 3699999998862
Q ss_pred --CCcceeecCCCC-CCCCCCeEEEEecCCCCC-----CceeeeEEeeccccc---cCC----CCCCcccE-EEEccccC
Q 015960 173 --HKLRSIPVGVSA-NLRIGQKVYAIGHPLGRK-----FTCTAGIISAFGLEP---ITA----TGPPIQGL-IQIDAAIN 236 (397)
Q Consensus 173 --~~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~-----~~~~~G~vs~~~~~~---~~~----~~~~~~~~-i~~~~~i~ 236 (397)
..+.|+.|.... ....++.+++.||..... .......+.-+.... ... ....+... .......+
T Consensus 492 ~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C 571 (625)
T 2f83_A 492 YTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 571 (625)
T ss_dssp CBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----------
T ss_pred CCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCCCCCcCC
Confidence 356777775433 245688899999975321 112222222111111 000 01111111 12234578
Q ss_pred CCCcccceecC-Cc--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHH
Q 015960 237 RGNSGGPLLDS-SG--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 237 ~G~SGGPlvn~-~G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
.|||||||+-. +| .|+||++++..- ......+...-+....+|+++..
T Consensus 572 ~GDSGGPLv~~~~~~~~lvGIvS~G~~C-~~~~~P~vyT~V~~y~~WI~~~~ 622 (625)
T 2f83_A 572 KGDSGGPLSCKHNEVWHLVGITSWGEGC-AQRERPGVYTNVVEYVDWILEKT 622 (625)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEECCC-----CCCCEEEEGGGGHHHHHHTC
T ss_pred CCCcccceEEEECCeEEEEEEEEeCCCC-CCCCCCeEEEEHHHHHHHHHHHH
Confidence 99999999853 45 599999998542 21223455677778888887643
No 141
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=99.06 E-value=5.3e-10 Score=92.11 Aligned_cols=68 Identities=24% Similarity=0.275 Sum_probs=60.7
Q ss_pred CCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEE
Q 015960 309 ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILII 388 (397)
Q Consensus 309 ~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 388 (397)
..|++|..|.++|||+++ |++ ||+|++|||++|.++.++..++...++|+++.++| |+|+ ++++
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~-----------GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~---~~v~ 87 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTP-----------GLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT---FHLK 87 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCT-----------TCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE---EEEE
T ss_pred CCceEEEEECCCChHHHh-cCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE---EEEE
Confidence 478999999999999999 999 99999999999999999999998767899999999 9887 5666
Q ss_pred eeeC
Q 015960 389 LEVE 392 (397)
Q Consensus 389 l~~~ 392 (397)
+.+.
T Consensus 88 l~~~ 91 (125)
T 2hga_A 88 TGRN 91 (125)
T ss_dssp CCBC
T ss_pred Eecc
Confidence 6543
No 142
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.04 E-value=3.8e-10 Score=91.01 Aligned_cols=72 Identities=25% Similarity=0.308 Sum_probs=64.6
Q ss_pred CCcEEEEecccCcccccCc-cccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGL-RSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl-~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~ 386 (397)
.|++|..+.++|||+++|| ++ ||+|++|||+++.+ +.++.+++.. .+|+++.+++.|+++..++.
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~~~ 93 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IASETHVVLILRGPEGFTTH 93 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHH-SCSSSEEEEEEECCTTSEEE
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCCcEEEEEEeCCcccceE
Confidence 5899999999999999998 99 99999999999999 9999999987 57899999999999888888
Q ss_pred EEeeeCC
Q 015960 387 IILEVEP 393 (397)
Q Consensus 387 v~l~~~~ 393 (397)
+.....+
T Consensus 94 ~~~~~~~ 100 (112)
T 1qau_A 94 LETTFTG 100 (112)
T ss_dssp EEEEECT
T ss_pred eeeeccC
Confidence 7765544
No 143
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.01 E-value=3.4e-09 Score=109.22 Aligned_cols=171 Identities=12% Similarity=0.046 Sum_probs=87.8
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC--CeEEEEecC----------CcEEEEEEEEEcC-------CCCeEEEEEcCCCC-
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA--SSVKVTLFD----------KTTLDAKVVGHDQ-------GTDLAVLHIDAPNH- 173 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~--~~i~V~~~~----------g~~~~a~vv~~d~-------~~DlAlL~v~~~~~- 173 (397)
..++|.||+++ ||||||||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+-.
T Consensus 345 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~ 423 (565)
T 2xrc_A 345 ITCGGIYIGGC-WILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNK 423 (565)
T ss_dssp CCCCCEEEETT-EEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSS
T ss_pred eeeeEEEEeCC-EEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeecccccc
Confidence 47999999987 999999999753 345555421 1233333344443 46999999987621
Q ss_pred ------CcceeecCCCC-CCCCCCeEEEEecCCCCC----CceeeeEEeeccc-cccCCCCCCcccEEEE-----ccccC
Q 015960 174 ------KLRSIPVGVSA-NLRIGQKVYAIGHPLGRK----FTCTAGIISAFGL-EPITATGPPIQGLIQI-----DAAIN 236 (397)
Q Consensus 174 ------~~~~~~l~~s~-~~~~G~~V~~iG~p~g~~----~~~~~G~vs~~~~-~~~~~~~~~~~~~i~~-----~~~i~ 236 (397)
.+.|+.|.... .+..|+.+++.||..... .......+.-+.. .............+-. ....+
T Consensus 424 ~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C~~~~~~~~~~~~~iCAg~~~g~~d~C 503 (565)
T 2xrc_A 424 KDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSKFYGNRFYEKEMECAGTYDGSIDAC 503 (565)
T ss_dssp SCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCTHHHHTTSCCTTTEEEEEEC-------
T ss_pred ccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHhHHhhccCcCCCceEEeCCCCCCCccC
Confidence 34566665332 356799999999975322 1112222221110 0000000000112322 23568
Q ss_pred CCCcccceecC--Ccc--EEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 237 RGNSGGPLLDS--SGS--LIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 237 ~G~SGGPlvn~--~G~--vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
.|+|||||+-. +|+ |+||+|++..-. .....+...-+.....|+++.+.
T Consensus 504 ~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~-~~~~PgVYTrVs~y~~WI~~~i~ 556 (565)
T 2xrc_A 504 KGDSGGPLVCMDANNVTYVWGVVSWGENCG-KPEFPGVYTKVANYFDWISYHVG 556 (565)
T ss_dssp ---CCCEEEEECTTCCEEEEEEECC-------CCCCEEEEEGGGGHHHHHHHC-
T ss_pred CCccccceEEEeCCCcEEEEEEEeeCCCCC-CCCCCEEEEEHHHHHHHHHHHhc
Confidence 99999999842 453 899999985422 22234666778888888887654
No 144
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.01 E-value=5e-10 Score=86.85 Aligned_cols=66 Identities=14% Similarity=0.271 Sum_probs=51.6
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~ 386 (397)
.|++|.++.++|||+++| |++ ||+|++|||+++. ++.++..++.. .++++.++|.|+|+..++.
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~g~~~~~~ 89 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIER--SKGKLKMVVQRDERATLLN 89 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEEC--------
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEEeCCceeeee
Confidence 588999999999999999 999 9999999999999 99999998876 3458999999999877665
Q ss_pred EE
Q 015960 387 II 388 (397)
Q Consensus 387 v~ 388 (397)
++
T Consensus 90 v~ 91 (92)
T 3cyy_A 90 VP 91 (92)
T ss_dssp --
T ss_pred CC
Confidence 53
No 145
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.01 E-value=2.6e-10 Score=88.47 Aligned_cols=61 Identities=26% Similarity=0.384 Sum_probs=51.9
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++||++ ||+|++|||+++. ++.++..++... |+++.|+|.|+++..
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLED-----------EDVIIEVNGVNVLDEPYEKVVDRIQSS--GKNVTLLVCGKKAQD 89 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--CSEEEEEEEC-----
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCEEEEEEEeCCccc
Confidence 688999999999999999999 9999999999999 999999999764 899999999988754
No 146
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.00 E-value=2.3e-10 Score=89.71 Aligned_cols=62 Identities=32% Similarity=0.451 Sum_probs=54.6
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++.++........+|+++.++|.|+|+.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 34 EGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERET 95 (97)
T ss_dssp CSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCCcc
Confidence 689999999999999999999 99999999999999887665544334799999999999864
No 147
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=99.00 E-value=2.6e-08 Score=89.33 Aligned_cols=166 Identities=14% Similarity=0.207 Sum_probs=111.4
Q ss_pred HHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCC-CeEEEEecCCcEEEEE----EEEEcCCC
Q 015960 87 FEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGA-SSVKVTLFDKTTLDAK----VVGHDQGT 161 (397)
Q Consensus 87 ~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~-~~i~V~~~~g~~~~a~----vv~~d~~~ 161 (397)
+.-+...|+.+.+.+. .....--|+.+. .||+|++|..+.. ..+.|+...|+..-.. -+..-+..
T Consensus 11 yn~ia~~iC~l~n~sd--------g~~~~l~gigyG--~~iItn~HLf~rnng~L~I~s~hG~f~v~nt~~lki~~i~g~ 80 (241)
T 3mmg_A 11 FNPISACVCLLENSSD--------GHSERLFGIGFG--PYIIANQHLFRRNNGELTIKTMHGEFAVANSTQLQMKPVEGR 80 (241)
T ss_dssp CHHHHTTEEEEEEEET--------TEEEEEEEEEET--TEEEECGGGGSSTTCEEEEEETTEEEEEEEGGGSCEEECTBS
T ss_pred CChhhheEEEEEEEeC--------CCEEEEEEEeEC--CEEEEChhhcccCCCeEEEEECCceEEccCCCceeeEEeCCc
Confidence 3456678899987542 112233566665 4999999999855 5799998877533221 24456789
Q ss_pred CeEEEEEcCCCCCcceeecCCC-CCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCc
Q 015960 162 DLAVLHIDAPNHKLRSIPVGVS-ANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNS 240 (397)
Q Consensus 162 DlAlL~v~~~~~~~~~~~l~~s-~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 240 (397)
||.++|++. ++||.+-... ..+..||+|.++|..+...... ..||......... + ..+..+-.....|+.
T Consensus 81 DiiiIrmPk---DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~~--s~vSesS~i~p~~-~---~~fWkHwIsT~~G~C 151 (241)
T 3mmg_A 81 DIIVIKMAK---DFPPFPQKLKFRQPTIKDRVCMVSTNFQQKSVS--SLVSESSHIVHKE-D---TSFWQHWITTKDGQA 151 (241)
T ss_dssp SCEEEECCT---TSCCCCSCCCBCCCCTTCCEEEEEEEECSSCEE--EEEEEEECCEECT-T---SSEEEECBCCCTTCT
T ss_pred cEEEEeCCC---CCCCcchhcccCCCCCCCeEEEEEeecccCCcc--EEECCcceeEEcC-C---CCEEEEEcCCCCCcC
Confidence 999999966 4555544321 4589999999999765433222 2344332221111 1 467888888999999
Q ss_pred ccceecC-CccEEEEEeeeeccCCCccCceeeEecc
Q 015960 241 GGPLLDS-SGSLIGVNTSIITRTDAFCGMACSIPID 275 (397)
Q Consensus 241 GGPlvn~-~G~vVGI~s~~~~~~~~~~~~~~aip~~ 275 (397)
|+||++. +|.+|||++....... .+|+.|+.
T Consensus 152 GlPlVs~~Dg~IVGiHsl~~~~~~----~N~F~~f~ 183 (241)
T 3mmg_A 152 GSPLVSIIDGNILGIHSLTHTTNG----SNYFVEFP 183 (241)
T ss_dssp TCEEEETTTCCEEEEEEEEETTTC----CEEEEECC
T ss_pred CCeEEEcCCCcEEEEEecccCCCC----cEEEEcCC
Confidence 9999986 9999999998865432 58888874
No 148
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.00 E-value=1.8e-10 Score=90.24 Aligned_cols=62 Identities=26% Similarity=0.363 Sum_probs=56.2
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++..++.. .|+++.|+|.|+++.++
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~~~ 93 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGMQA-----------GDRLVAVAGESVEGLGHEETVSRIQG--QGSCVSLTVVDPEADRE 93 (96)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEECCCTTSC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEECCCCccc
Confidence 479999999999999999999 99999999999999 7999998876 38999999999886543
No 149
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.5e-10 Score=95.40 Aligned_cols=68 Identities=24% Similarity=0.205 Sum_probs=61.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILII 388 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 388 (397)
.|++|..|.+++||+++| |++ ||+|++|||++|.++.++..+|.. .+|+++.|+|.|+++.++....
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~~~~~ 115 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIRE-----------GDRIIQINGIEVQNREEAVALLTS-EENKNFSLLIARPELQLDEGWM 115 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCT-----------TCEEEEESSCBCCSHHHHHHHHTC-SSCCSCCEEEEECSSCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCHHHHHHHHHh-CCCCEEEEEEEECCEEeecccC
Confidence 689999999999999999 999 999999999999999999999987 5789999999999987655444
Q ss_pred e
Q 015960 389 L 389 (397)
Q Consensus 389 l 389 (397)
.
T Consensus 116 ~ 116 (124)
T 1wh1_A 116 D 116 (124)
T ss_dssp C
T ss_pred C
Confidence 3
No 150
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.98 E-value=8e-10 Score=112.40 Aligned_cols=172 Identities=13% Similarity=0.089 Sum_probs=96.4
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC---CeEEEEecC-----CcEEEEEEEEEcC----------------CCCeEEEEEc
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA---SSVKVTLFD-----KTTLDAKVVGHDQ----------------GTDLAVLHID 169 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~---~~i~V~~~~-----g~~~~a~vv~~d~----------------~~DlAlL~v~ 169 (397)
..|.|.+|+++ ||||||||+.+. ..+.|++.. ++.+..+-+..++ .+|||||+++
T Consensus 247 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~ 325 (509)
T 2odp_A 247 ETCRGALISDQ-WVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLA 325 (509)
T ss_dssp -CEEEEECSSS-EEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEES
T ss_pred cEEEEEEEcCC-EEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccccccCCCeEEEEEC
Confidence 47999999987 999999999753 456676642 3445554444443 3699999999
Q ss_pred CCC---CCcceeecCCCC------CCCCCCeEEEEecCCCCCCc------------eeeeEEe---ecccccc-------
Q 015960 170 APN---HKLRSIPVGVSA------NLRIGQKVYAIGHPLGRKFT------------CTAGIIS---AFGLEPI------- 218 (397)
Q Consensus 170 ~~~---~~~~~~~l~~s~------~~~~G~~V~~iG~p~g~~~~------------~~~G~vs---~~~~~~~------- 218 (397)
.+- ..+.|+.|.... ....|..+.+.||....... ...-++. ...+...
T Consensus 326 ~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 405 (509)
T 2odp_A 326 QKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTM 405 (509)
T ss_dssp SCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGCTTT
T ss_pred CcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHHHHHHHhhccccc
Confidence 862 356777775432 12456666555554211111 1111111 0011100
Q ss_pred CC-----CCCCcccEEEEc----cccCCCCcccceecCC-c--cEEEEEeeeec-cCC-----------CccCc----ee
Q 015960 219 TA-----TGPPIQGLIQID----AAINRGNSGGPLLDSS-G--SLIGVNTSIIT-RTD-----------AFCGM----AC 270 (397)
Q Consensus 219 ~~-----~~~~~~~~i~~~----~~i~~G~SGGPlvn~~-G--~vVGI~s~~~~-~~~-----------~~~~~----~~ 270 (397)
.. ........+... ...|.|||||||+-.. | .++||+|++.. .++ ...+. ++
T Consensus 406 ~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~v 485 (509)
T 2odp_A 406 FPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDF 485 (509)
T ss_dssp CTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCCCEE
T ss_pred ccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccccCcccCCCCCCce
Confidence 00 000112345442 3579999999999532 3 49999999863 232 11121 46
Q ss_pred eEeccchhHHHHHHHh
Q 015960 271 SIPIDTVSGIVDQLVK 286 (397)
Q Consensus 271 aip~~~i~~~~~~l~~ 286 (397)
...+....+|+++..+
T Consensus 486 yt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 486 HINLFRMQPWLRQHLG 501 (509)
T ss_dssp EEEGGGCHHHHHHHHT
T ss_pred eeeHHHHhHHHHHHhC
Confidence 6778888999988765
No 151
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.97 E-value=8.5e-10 Score=84.71 Aligned_cols=59 Identities=29% Similarity=0.381 Sum_probs=54.2
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++.+++.... +++.++|.|+++
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRP-----------GDIIVAINGESAEGMLHAEAQSKIRQSP--SPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCT-----------TCEEEEETTEESTTCCHHHHHHHHHTCC--SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCC--CeEEEEEEecCC
Confidence 478999999999999999999 99999999999999 899999998753 789999999875
No 152
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.97 E-value=4.7e-10 Score=97.09 Aligned_cols=81 Identities=19% Similarity=0.240 Sum_probs=65.7
Q ss_pred ccccCCCchhHHHHHHcCCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHH-HHHHHhcCCCC
Q 015960 291 IRPYLGIAHDQLLEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAND-LHNILDQCKVG 369 (397)
Q Consensus 291 ~~~~lGi~~~~~~~~~~~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d-~~~~l~~~~~g 369 (397)
.++|+|+.... ...|++|..+.++|||+++||++ ||+|++|||+++.++.+ +...+....+|
T Consensus 14 ~~~~lG~~~~~------~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 76 (166)
T 1w9e_A 14 QDGKIGLRLKS------IDNGIFVQLVQANSPASLVGLRF-----------GDQVLQINGENCAGWSSDKAHKVLKQAFG 76 (166)
T ss_dssp TTSCCSEEEEE------ETTEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCCcEeEEEEe------CCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 46889986543 12689999999999999999999 99999999999999988 66555555678
Q ss_pred CEEEEEEEECCeEEEEEEE
Q 015960 370 DEVIVRILRGTQLEEILII 388 (397)
Q Consensus 370 ~~v~l~v~R~g~~~~~~v~ 388 (397)
+++.++|+|+++.++++++
T Consensus 77 ~~v~l~vr~~~~~~~v~l~ 95 (166)
T 1w9e_A 77 EKITMTIRDRPFERTITMH 95 (166)
T ss_dssp SEEEEEEECCTTCEEEEEE
T ss_pred CEEEEEEEcCCCcEEEEEe
Confidence 8999999554477776665
No 153
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.97 E-value=4.6e-10 Score=88.07 Aligned_cols=61 Identities=26% Similarity=0.357 Sum_probs=56.4
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. +|+++.|+|.|+++..
T Consensus 32 ~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 32 RPVVITSVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEAALLIEYDVSET 95 (97)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--SCSEEEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCcC
Confidence 588999999999999999 999 99999999999999 9999999876 7899999999987653
No 154
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=4.4e-10 Score=90.40 Aligned_cols=63 Identities=32% Similarity=0.434 Sum_probs=53.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++||++ ||+|++|||++|.+..++........+|+++.|+|+|+++.+
T Consensus 46 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 46 EGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp CSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECSSCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECCccC
Confidence 789999999999999999999 999999999999996554443332247999999999998754
No 155
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.96 E-value=7e-10 Score=91.31 Aligned_cols=62 Identities=29% Similarity=0.382 Sum_probs=57.4
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||++ ||+|++|||++|.++ .++..++....+|++++|+|.|+++.
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCch
Confidence 689999999999999999999 999999999999998 89999888767899999999998753
No 156
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.95 E-value=9.9e-10 Score=86.29 Aligned_cols=59 Identities=27% Similarity=0.400 Sum_probs=52.9
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.++ .++..++.. +|+++.|+|.|+|+
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKV-----------GDRILSLNGKDVRNSTEQAVIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEEC--
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Confidence 589999999999999999 999 999999999999986 788888875 78999999999874
No 157
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.94 E-value=9.9e-10 Score=85.54 Aligned_cols=60 Identities=30% Similarity=0.388 Sum_probs=51.6
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++.+. +++...++|+++.|+|+|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~-~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKE-----------GDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCS-----------SCEEEEETTEECSSSCHH-HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHH-HHHHhhcCCCEEEEEEEECCC
Confidence 578999999999999999999 999999999999987554 344444579999999999764
No 158
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.93 E-value=1.5e-09 Score=83.45 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=52.8
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.++|||+++||++ ||+|++|||+++.++ .++...+.. .|+++.++|.|+++
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRI-----------GDVVLSIDGINAQGMTHLEAQNKIKG--CTGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCC
Confidence 478999999999999999999 999999999999998 788777765 38899999999874
No 159
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.92 E-value=2.2e-09 Score=87.92 Aligned_cols=61 Identities=23% Similarity=0.355 Sum_probs=55.6
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++...++|+++.|+|.|+++
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCS-----------SSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCCC
Confidence 678999999999999999 999 99999999999988 58898888876678999999999874
No 160
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=2.7e-10 Score=94.31 Aligned_cols=71 Identities=21% Similarity=0.186 Sum_probs=59.4
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++.+ .+++...+.++.+.|+|.|+|+..++.+++
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~-~~~~~~~~~~~~v~l~v~R~g~~~~~~v~~ 113 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKV-----------GDQILEVNGRSFLNILH-DEAVRLLKSSRHLILTVKDVGRLPHARTTV 113 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCT-----------TCEEEEETTEECSSCCH-HHHHHHHTTCSEEEEEEECCSCCSSCSCCC
T ss_pred CCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCH-HHHHHHHhcCCeEEEEEEECCccccccccc
Confidence 488999999999999999999 99999999999999755 444444455789999999999988877776
Q ss_pred eeC
Q 015960 390 EVE 392 (397)
Q Consensus 390 ~~~ 392 (397)
.+.
T Consensus 114 ~~~ 116 (128)
T 1uf1_A 114 DET 116 (128)
T ss_dssp CSS
T ss_pred ccc
Confidence 543
No 161
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.92 E-value=4.9e-10 Score=88.12 Aligned_cols=60 Identities=25% Similarity=0.318 Sum_probs=55.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++..++... +++.+.++|.|+|+
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEECCHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCcEEEEEEECCch
Confidence 589999999999999999999 99999999999999 99999999875 78888899999775
No 162
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.92 E-value=2.1e-09 Score=82.06 Aligned_cols=58 Identities=28% Similarity=0.363 Sum_probs=52.7
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILR 378 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R 378 (397)
.|++|..+.++|||+++| |++ ||+|++|||+++. ++.++.+++...++|+++.++|.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 578999999999999999 999 9999999999999 568999888877779999999876
No 163
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.92 E-value=1.3e-09 Score=84.17 Aligned_cols=59 Identities=24% Similarity=0.357 Sum_probs=54.2
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++ .++..++... |+++.|+|.|.+.
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRA-----------QDRLIEVNGQNVEGLRHAEVVASIKAR--EDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--SSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCcEEEEEEccCC
Confidence 589999999999999999999 999999999999998 8999988763 8899999999764
No 164
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.92 E-value=2.2e-09 Score=82.60 Aligned_cols=59 Identities=29% Similarity=0.468 Sum_probs=50.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..+ ++|||+ +||++ ||+|++|||+++.++ .++...+....+|+++.++|.|+++
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKE-----------GDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEECC
T ss_pred CcEEEEEe-cCChhH-hCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCCc
Confidence 57788776 999999 99999 999999999999987 8888888766789999999999875
No 165
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.91 E-value=3.3e-10 Score=92.38 Aligned_cols=63 Identities=14% Similarity=0.243 Sum_probs=57.7
Q ss_pred CCcEEEEecc--cCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEE
Q 015960 310 SGGVIFIAVE--EGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQLEEI 385 (397)
Q Consensus 310 ~g~~V~~v~~--~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~~~~ 385 (397)
.|++|..|.+ ++||+++||++ ||+|++|||++|.++ .++.+++... |+++.|+|.|+++.+++
T Consensus 44 ~gv~V~~V~~~~~spA~~aGL~~-----------GD~Il~Vng~~v~~~~~~dl~~~l~~~--g~~v~l~v~R~g~~~~~ 110 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNAIHP-----------GDRILEINGTPVRTLRVEEVEDAIKQT--SQTLQLLIEHDPVPQRL 110 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHHCCT-----------TCCEEEESSSBTTTSCHHHHHHHHHCC--SSCEEEEEEECSSCCCC
T ss_pred CcEEEEEecCCCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHhC--CCEEEEEEEECCEEEee
Confidence 6899999999 99999999999 999999999999999 9999999875 88999999999886543
No 166
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.91 E-value=8.2e-10 Score=99.31 Aligned_cols=70 Identities=26% Similarity=0.298 Sum_probs=61.0
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCC-cEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILG-DIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILII 388 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~G-DiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 388 (397)
.|++|.+|.++|||++|||++ | |+|++|||++|.++.++...+....+|++++++|+|+++..+.+++
T Consensus 16 ~G~~V~~V~~~SpA~~AGL~~-----------G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~ 84 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAGLEP-----------FFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETS 84 (209)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEE
T ss_pred CEEEEEEECCCCHHHHCCCCc-----------CCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEE
Confidence 689999999999999999999 9 9999999999999999887776667899999999997655555555
Q ss_pred ee
Q 015960 389 LE 390 (397)
Q Consensus 389 l~ 390 (397)
+.
T Consensus 85 l~ 86 (209)
T 3rle_A 85 VT 86 (209)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 167
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.90 E-value=3.2e-09 Score=84.82 Aligned_cols=69 Identities=23% Similarity=0.259 Sum_probs=57.5
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe-EEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ-LEEI 385 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~-~~~~ 385 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .++++.|+|.|+++ ...+
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~~~ 98 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNNVALEEVTHEEAVTALKN--TSDFVYLKVAKPGSGEKIM 98 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHS--CCSEEEEEEECCSSSCSEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCCCeEE
Confidence 589999999999999999 999 99999999999965 6777777754 57799999999875 4455
Q ss_pred EEEeee
Q 015960 386 LIILEV 391 (397)
Q Consensus 386 ~v~l~~ 391 (397)
++++.+
T Consensus 99 ~v~l~~ 104 (106)
T 4amh_A 99 EIKLIK 104 (106)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 666654
No 168
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.90 E-value=2.9e-09 Score=85.64 Aligned_cols=62 Identities=23% Similarity=0.358 Sum_probs=56.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++...++|+++.|+|.|+++.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCT-----------TCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCC
T ss_pred cCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 689999999999999999 999 99999999999965 589998888766799999999998864
No 169
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.90 E-value=1.6e-09 Score=85.28 Aligned_cols=59 Identities=32% Similarity=0.491 Sum_probs=53.9
Q ss_pred CcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 311 GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 311 g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
|++|..+.++|||+++||++ ||+|++|||+++. ++.++..++. .+|+++.|++.|+++.
T Consensus 35 g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~--~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRA-----------GDLITHINGESVLGLVHMDVVELLL--KSGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEECSCSS
T ss_pred CeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--cCCCEEEEEEEECCCc
Confidence 67899999999999999999 9999999999999 7889988887 4789999999997753
No 170
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.89 E-value=3e-09 Score=109.94 Aligned_cols=73 Identities=22% Similarity=0.330 Sum_probs=67.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
.|++|..|.++|||+++||++ ||+|++|||++| +..++.+++...++|++|+|+|.|+|+.+++++++
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~-----------GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 563 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSA-----------GDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRRDELMTLELTW 563 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CeEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEe
Confidence 478999999999999999999 999999999999 58899999988789999999999999999999998
Q ss_pred eeCCC
Q 015960 390 EVEPD 394 (397)
Q Consensus 390 ~~~~~ 394 (397)
.+.+.
T Consensus 564 ~~~~~ 568 (597)
T 4fgm_A 564 QEPAK 568 (597)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 76653
No 171
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.88 E-value=6.6e-10 Score=91.75 Aligned_cols=69 Identities=26% Similarity=0.329 Sum_probs=62.8
Q ss_pred CCcEEEEecccCcccccCc-cccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGL-RSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl-~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~ 386 (397)
.+++|..|.++|||+++|| ++ ||+|++|||+++.+ +.++.+++.. .+|+.+.++|.|+++.+++.
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~~~ 100 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IASETHVVLILRGPEGFTTH 100 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCT-----------TTCCCEETTEECSSSCHHHHHHHHHS-CCSSCEEEEEECCCCSEEEC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEEeCCceEEEE
Confidence 5789999999999999999 99 99999999999999 9999999987 57899999999999988877
Q ss_pred EEee
Q 015960 387 IILE 390 (397)
Q Consensus 387 v~l~ 390 (397)
+++.
T Consensus 101 ~~~~ 104 (127)
T 1b8q_A 101 LETT 104 (127)
T ss_dssp CCCC
T ss_pred EEEE
Confidence 7654
No 172
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=4.4e-09 Score=86.31 Aligned_cols=61 Identities=23% Similarity=0.387 Sum_probs=56.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++. ++.++.+++...++|+++.|+|.|++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMET-----------GDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 579999999999999999 999 9999999999998 678999999887679999999999874
No 173
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=1e-09 Score=86.59 Aligned_cols=74 Identities=23% Similarity=0.188 Sum_probs=57.3
Q ss_pred cccCCCchhHHHHHHcCCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCC
Q 015960 292 RPYLGIAHDQLLEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVG 369 (397)
Q Consensus 292 ~~~lGi~~~~~~~~~~~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g 369 (397)
.++||+....... ...|++|..|.++|||+++||++ ||+|++|||+++.++ .++...+. .|
T Consensus 21 ~~~lG~~~~~~~~---~~~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~---~~ 83 (100)
T 2eeh_A 21 AGRLGFSVRGGSE---HGLGIFVSKVEEGSSAERAGLCV-----------GDKITEVNGLSLESTTMGSAVKVLT---SS 83 (100)
T ss_dssp SSSCSEEEECCTT---TTCCEEEEEECTTSHHHHHTCCS-----------SCEEEEETTEECSSCCHHHHHHHHH---SC
T ss_pred CCCccEEEEcccc---CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHhhc---CC
Confidence 3567775432100 12589999999999999999999 999999999999985 55555554 37
Q ss_pred CEEEEEEEECCeE
Q 015960 370 DEVIVRILRGTQL 382 (397)
Q Consensus 370 ~~v~l~v~R~g~~ 382 (397)
+++.|+|+|+++.
T Consensus 84 ~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 84 SRLHMMVRRMGSG 96 (100)
T ss_dssp SSEEEEEEECSCC
T ss_pred CEEEEEEEECCcC
Confidence 8899999999864
No 174
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.88 E-value=1.8e-09 Score=86.00 Aligned_cols=69 Identities=22% Similarity=0.225 Sum_probs=52.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~ 386 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ ..++...+.. .|+.+.|+|.|+++.....
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~~~ 99 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNSVSLEEVTHEEAVTALKN--TSDFVYLKVAKPTSMYISR 99 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHS--CCSEEEEEEECCCC-----
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCCCCCcc
Confidence 589999999999999999 999 99999999999976 5666666654 4799999999999888777
Q ss_pred EEeee
Q 015960 387 IILEV 391 (397)
Q Consensus 387 v~l~~ 391 (397)
++...
T Consensus 100 ~~p~~ 104 (105)
T 2awx_A 100 HHHHH 104 (105)
T ss_dssp -----
T ss_pred ccccC
Confidence 66543
No 175
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.87 E-value=3.5e-09 Score=81.59 Aligned_cols=59 Identities=20% Similarity=0.326 Sum_probs=51.9
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++...+.. .|+++.++|.|+++
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAV-----------GDWVLSIDGENAGSLTHIEAQNKIRA--CGERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHT--CTTEEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEeCCC
Confidence 478999999999999999999 99999999999994 5777777764 48899999999875
No 176
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=6.1e-10 Score=86.92 Aligned_cols=60 Identities=27% Similarity=0.391 Sum_probs=54.2
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++ .++.+++.... +++.|+|+|+++.
T Consensus 30 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAADLRP-----------GDIIVAINGQSAENMLHAEAQSKIRQSA--SPLRLQLDRSSGP 91 (94)
T ss_dssp EEEECCCBCTTSSHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTCC--SSEEEEEECCCCC
T ss_pred CCeEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCC--CcEEEEEEECCcC
Confidence 578999999999999999999 999999999999997 89999887643 7899999999864
No 177
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.86 E-value=3e-09 Score=84.93 Aligned_cols=61 Identities=25% Similarity=0.297 Sum_probs=54.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+ +||++ ||+|++|||+++.++.++...+....+|+++.++|.|+++.
T Consensus 39 ~gv~V~~V~~~spA~-agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 39 TSIVISDVLKGGPAE-GQLQE-----------NDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCEEEEEECTTSTTB-TTBCT-----------TCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCEEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 589999999999999 99999 99999999999999988777665546799999999998764
No 178
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=1.1e-09 Score=87.00 Aligned_cols=62 Identities=21% Similarity=0.203 Sum_probs=56.4
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.+++|..|.++|||+++||++ ||+|++|||+++.+ +.++.+++... |+++.|+|.|+++...
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~v~l~v~R~g~~~~ 92 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCP-----------GDVILAIDGFGTESMTHADAQDRIKAA--SYQLCLKIDRAETRLW 92 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCT-----------TCBEEEETTEECSSCCHHHHHHHHTTC--CSEEECEECCCTTTTS
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEECCeEcc
Confidence 368999999999999999999 99999999999999 99999999764 8999999999987543
No 179
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.86 E-value=2.2e-09 Score=85.85 Aligned_cols=60 Identities=22% Similarity=0.341 Sum_probs=54.4
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||++|.+ +.++..++.. +|+++.|+|.|+++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 44 TGIYVKSLIPGSAAALDGRIEP-----------NDKILRVDDVNVQGMAQSDVVEVLRN--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp CCCEEEEECTTSHHHHHSSCCS-----------SEEEEEETTEECTTSCHHHHHHHHHH--HCSEEEEEEEECCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 689999999999999999 999 99999999999998 6788887765 688999999998864
No 180
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=2e-09 Score=88.22 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=56.8
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.+++|..|.+++||+++| |++ ||+|++|||+++.+ ++++.+++....+|+++.|+|.|+++.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCT-----------TCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCcc
Confidence 457999999999999999 999 99999999999988 999999998866689999999998764
No 181
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.7e-09 Score=85.82 Aligned_cols=61 Identities=20% Similarity=0.280 Sum_probs=54.4
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.++|||+++| |++ ||+|++|||++|.+ +.++.+++....+|++|.|+|.|+++
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHP-----------GDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 578999999999999999 999 99999999999965 88898888765448999999999765
No 182
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.85 E-value=2.6e-09 Score=81.55 Aligned_cols=59 Identities=14% Similarity=0.222 Sum_probs=50.9
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++ .++...+.. .++++.++|.|+++
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQ-----------GDLVVAIDGVNTDTMTHLEAQNKIKS--ASYNLSLTLQKSKR 85 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCC-----------CSBEEEETTEECTTCCHHHHHHHHTT--CSSCEEEEEESCCC
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHc--CCCeEEEEEEeCCC
Confidence 478999999999999999999 999999999999987 677666643 46679999999864
No 183
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=6.8e-09 Score=80.37 Aligned_cols=61 Identities=23% Similarity=0.270 Sum_probs=51.7
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++...+.. .++++.++|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCCC
Confidence 578999999999999999999 99999999999995 5788877765 4678999999987654
No 184
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.84 E-value=2.3e-09 Score=88.23 Aligned_cols=59 Identities=22% Similarity=0.410 Sum_probs=55.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.+++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++....+|++++|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQP-----------GDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCT-----------TCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 457899999999999999 999 9999999999995 8999999998878899999999998
No 185
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.84 E-value=6.4e-09 Score=81.50 Aligned_cols=60 Identities=23% Similarity=0.367 Sum_probs=53.9
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..+.++|||+++| |++ ||+|++|||+++.+ +.++..++. .+|+++.|+|.|+++.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~--~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHI-----------GDRILAINSSSLKGKPLSEAIHLLQ--MAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCCCeEEEEEEeCCCC
Confidence 588999999999999999 999 99999999999974 688888876 4789999999998864
No 186
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.83 E-value=7.1e-09 Score=81.00 Aligned_cols=59 Identities=24% Similarity=0.389 Sum_probs=53.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++. ++.++...+.. .|+++.++|.|++.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLEKGQS 94 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHS--CCSEEEEEEECCSC
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCC
Confidence 689999999999999999 999 9999999999999 56888877765 68999999999764
No 187
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.83 E-value=5.3e-09 Score=78.78 Aligned_cols=58 Identities=16% Similarity=0.327 Sum_probs=51.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|.++.++|||+++| |++ ||+|++|||+++. ++.++..++... ++++.++|.|+|
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~R~g 81 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQRDE 81 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTS--TTEEEEEEEC--
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHCC--CCeEEEEEEeCC
Confidence 578999999999999999 999 9999999999999 999999988763 348999999875
No 188
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.83 E-value=6.8e-10 Score=90.27 Aligned_cols=62 Identities=27% Similarity=0.334 Sum_probs=56.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC---CHHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS---NANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~---~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++. ++.++..++.. .|+++.|+|.|+++.++
T Consensus 49 ~gv~V~~V~~~spA~~aG~l~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 114 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAHRDGRLKE-----------TDQILAINGQALDQTITHQQAISILQK--AKDTVQLVIARGSLPQY 114 (117)
T ss_dssp EEEEECCCCTTSHHHHHCCCCT-----------TCEEEEETTEECCTTSCHHHHHHHHHH--CCSEEEEEEESSCCGGG
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--CCCEEEEEEEeCCccee
Confidence 589999999999999999 999 9999999999998 88999988876 58999999999987543
No 189
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.83 E-value=6.7e-10 Score=88.20 Aligned_cols=68 Identities=15% Similarity=0.193 Sum_probs=57.4
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQLEEILI 387 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v 387 (397)
.+++|..|.++|||+++||++ ||+|++|||+++.++ .++...+.. .++++.|+|.|+++..++++
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~~~~~~v 95 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRI-----------GDVVLSIDGISAQGMTHLEAQNKIKA--CTGSLNMTLQRASAAAKSEP 95 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--CSSEEEEEECCCSCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCcCCCCC
Confidence 357899999999999999999 999999999999987 566666654 47899999999998777666
Q ss_pred Eee
Q 015960 388 ILE 390 (397)
Q Consensus 388 ~l~ 390 (397)
++.
T Consensus 96 ~p~ 98 (103)
T 1wf7_A 96 VSS 98 (103)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 190
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.82 E-value=5.7e-09 Score=82.80 Aligned_cols=59 Identities=31% Similarity=0.364 Sum_probs=53.1
Q ss_pred CCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 309 ISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 309 ~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
..|++|..|.++|||+++||++ ||+|++|||+++.+ +.++...+.. .+|+++.++|.|+
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 44 DKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDMTMVTHDQARKRLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp CCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHTC-TTCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCCEEEEEEEcC
Confidence 3789999999999999999999 99999999999976 5699988876 6789999999984
No 191
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=1.3e-09 Score=86.27 Aligned_cols=60 Identities=20% Similarity=0.298 Sum_probs=52.8
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++.+ .+++...+.++++.|+|+|+++
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~-~~~~~~~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRV-----------GDQILRVNDKSLARVTH-AEAVKALKGSKKLVLSVYSAGR 94 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCS-----------SCCEEEETTEECSSCCH-HHHHHHSSSSSSCCEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCH-HHHHHhhcCCCeEEEEEEECCc
Confidence 589999999999999999999 99999999999999987 4455555667889999999876
No 192
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.82 E-value=2.9e-09 Score=83.11 Aligned_cols=59 Identities=31% Similarity=0.432 Sum_probs=51.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ +.+....+.. +|+++.++|.|+++
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSS-----------NDRVLAINGHDLKYGTPELAAQIIQA--SGERVNLTIARPGK 90 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEEESC
T ss_pred CCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEcCCc
Confidence 589999999999999999 999 99999999999986 4555555543 58999999999875
No 193
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.81 E-value=3.1e-09 Score=84.12 Aligned_cols=61 Identities=26% Similarity=0.272 Sum_probs=54.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. +|+++.|+|.|+++..
T Consensus 34 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 34 PGIFITKIIPGGAAAMDGRLGV-----------NDCVLRVNEVDVSEVVHSRAVEALKE--AGPVVRLVVRRRQPPP 97 (102)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--SCSEEEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCCC
Confidence 689999999999999999 999 99999999999987 7777777765 6899999999988653
No 194
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.81 E-value=7.1e-09 Score=81.31 Aligned_cols=62 Identities=32% Similarity=0.413 Sum_probs=53.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .++++.++|.|+++..+
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWA-----------GDQILEVNGIDLRKATHDEAINVLRQ--TPQRVRLTLYRDEAPYK 94 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEECSSCCC
T ss_pred CCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCCCCCc
Confidence 589999999999999999 999 99999999999987 4677776654 35899999999886543
No 195
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.81 E-value=5e-09 Score=81.04 Aligned_cols=57 Identities=19% Similarity=0.254 Sum_probs=48.8
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHH--HHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAND--LHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d--~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++.+ ....+. ..|+++.++|.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKP-----------YDRLLQVNHVRTRDFDCCLVVPLIA--ESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCCCEEEEEEEeC
Confidence 689999999999999999999 99999999999998643 334444 3588999999986
No 196
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=3.5e-09 Score=82.54 Aligned_cols=59 Identities=24% Similarity=0.287 Sum_probs=51.3
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.++|||+++||++ ||+|++|||+++.++ .++...+.. +|+++.|+|.|+++
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCP-----------GDLIQAINGESTELMTHLEAQNRIKG--CHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCT-----------TCEEEEETTEETTTCCHHHHHHHHHT--CCSCEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Confidence 578999999999999999999 999999999999985 566666654 67889999999875
No 197
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.80 E-value=3.7e-09 Score=81.61 Aligned_cols=60 Identities=25% Similarity=0.272 Sum_probs=52.6
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.+++|..|.++|||+++| |++ ||+|++|||+++ .++.++..++.....++++.++|.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRS-----------GDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 468999999999999999 999 999999999999 568888888876544568999999864
No 198
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=6.9e-09 Score=84.39 Aligned_cols=60 Identities=25% Similarity=0.368 Sum_probs=53.5
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++. ++.++...+.. .++++.|+|.|+++.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKR-----------GDQIIAVNGQSLEGVTHEEAVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 578999999999999999 999 9999999999999 78888888875 345699999999875
No 199
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.79 E-value=7.8e-09 Score=81.73 Aligned_cols=59 Identities=24% Similarity=0.343 Sum_probs=54.0
Q ss_pred CCcEEEEecccCcccc-cCccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGK-AGLRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~-aGl~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.+++|..|.+++||++ +||++ ||+|++|||+++ .+++++.+++...++|++++|+|.|.
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSI-----------GDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred cCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4689999999999999 67999 999999999999 89999999998876899999999884
No 200
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.79 E-value=8.5e-09 Score=84.63 Aligned_cols=59 Identities=29% Similarity=0.477 Sum_probs=53.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||++|.+ +.++.+++... ++++.|+|.|...
T Consensus 59 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 59 RGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVEAIRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp CSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC--CSSEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEECCc
Confidence 689999999999999999 999 99999999999998 89999999764 4589999998654
No 201
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.79 E-value=1.1e-08 Score=79.51 Aligned_cols=59 Identities=25% Similarity=0.357 Sum_probs=51.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..+.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .++++.|+|.|+++
T Consensus 33 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRLQI-----------GDRLLAVNNTNLQDVRHEEAVASLKN--TSDMVYLKVAKPGS 94 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHT--CCSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCC
Confidence 689999999999999999 999 99999999999988 4677766654 45689999999864
No 202
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.79 E-value=2.3e-09 Score=85.49 Aligned_cols=60 Identities=32% Similarity=0.505 Sum_probs=53.8
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHH--HHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAN--DLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~--d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++. ++...+. .+|+++.++|.|+++.
T Consensus 26 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~--~~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVR--KSGNSVTLLVLDGDSY 87 (106)
T ss_dssp CSCEEECCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHH--HTTTEEEEEEECHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--hCCCEEEEEEEECCee
Confidence 589999999999999999999 9999999999999876 8888886 3688999999997653
No 203
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.79 E-value=7.4e-09 Score=85.97 Aligned_cols=61 Identities=23% Similarity=0.242 Sum_probs=55.7
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++.+ +.++..++....+|+++.|+|.|++.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRP-----------GDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 488999999999999999 999 99999999999975 68999999887788999999999764
No 204
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=6.8e-09 Score=82.39 Aligned_cols=60 Identities=22% Similarity=0.320 Sum_probs=52.8
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.+++|..|.+++||+++| |++ ||+|++|||+++.+ +.++...+.. +|+++.|+|.|+++.
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEV-----------GDLVLHINGESTQGLTHAQAVERIRA--GGPQLHLVIRRPLSG 100 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCT-----------TCBEEEETTEECTTCCHHHHHHHHHH--TCSEEEEEECCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCCC
Confidence 578999999999999999 999 99999999999988 5677766655 688999999998763
No 205
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=7.5e-09 Score=81.95 Aligned_cols=59 Identities=29% Similarity=0.477 Sum_probs=52.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++.+++... ++++.++|.|.++
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVEAIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTC--CSSEEEEEECCCC
T ss_pred CCEEEEEeCCCCcHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEEEEECCC
Confidence 689999999999999999 999 99999999999998 99999999764 4489999999764
No 206
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.78 E-value=3.3e-09 Score=85.78 Aligned_cols=65 Identities=29% Similarity=0.470 Sum_probs=57.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQLEEILI 387 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v 387 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++ .++...+.. +|+++.|+|.|+++.+++++
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~~~~~~ 104 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVLDGDSYEKAVK 104 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCT-----------TCEEEEESSSBCSSSCHHHHHHHHHH--TCSEEEEEEECHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCcceehhh
Confidence 689999999999999999999 999999999999884 888888875 48999999999887655443
No 207
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.78 E-value=1e-07 Score=78.85 Aligned_cols=85 Identities=16% Similarity=0.200 Sum_probs=60.4
Q ss_pred CceeEEEEEcCCCEEEEcccccCCCCeEEEEecC---------CcEEEEEEEEEcC-------CCCeEEEEEcCCC---C
Q 015960 113 QATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFD---------KTTLDAKVVGHDQ-------GTDLAVLHIDAPN---H 173 (397)
Q Consensus 113 ~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~---------g~~~~a~vv~~d~-------~~DlAlL~v~~~~---~ 173 (397)
...|+|.+|+++ ||||+|||+.+ ....|.+.. .+.+..+-+..++ .+|||||+++.+- .
T Consensus 24 ~~~CgGsLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (131)
T 1yph_C 24 FHFCGGSLINEN-WVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 101 (131)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CEEEEEEEeeCC-EEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCC
Confidence 357999999987 99999999976 444555431 2344444444443 4699999999862 3
Q ss_pred CcceeecCCCC-CCCCCCeEEEEecCC
Q 015960 174 KLRSIPVGVSA-NLRIGQKVYAIGHPL 199 (397)
Q Consensus 174 ~~~~~~l~~s~-~~~~G~~V~~iG~p~ 199 (397)
.+.++.|.... .+..|+.+++.||..
T Consensus 102 ~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 102 TVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cCcceECCCcccCCCCCCEEEEEcCCc
Confidence 56788886543 256899999999974
No 208
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.77 E-value=8.5e-09 Score=80.34 Aligned_cols=60 Identities=27% Similarity=0.424 Sum_probs=51.7
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.++ .++..++.. .++++.+.+.|.+..
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGDQTTLLVLDKELE 90 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEECCccc
Confidence 489999999999999999999 999999999999998 899998876 466778888776544
No 209
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=7.2e-10 Score=89.10 Aligned_cols=68 Identities=21% Similarity=0.212 Sum_probs=57.1
Q ss_pred CCCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEE
Q 015960 309 ISGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEEI 385 (397)
Q Consensus 309 ~~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~ 385 (397)
..|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .++++.|+|.|+++.+++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~~ 101 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSL-----------GDRILEVNGSSLLGLGYLRAVDLIRH--GGKKMRFLVAKSDVETAK 101 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCT-----------TCEEEEESSCBCSSCCHHHHHHHHHT--CCSEEEEEEECCCHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcceeE
Confidence 3689999999999999999 999 99999999999974 6666666654 589999999999876655
Q ss_pred EEEe
Q 015960 386 LIIL 389 (397)
Q Consensus 386 ~v~l 389 (397)
.++.
T Consensus 102 ~v~~ 105 (110)
T 1um1_A 102 KIHS 105 (110)
T ss_dssp HHSS
T ss_pred EEEe
Confidence 5443
No 210
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.77 E-value=1e-08 Score=84.79 Aligned_cols=61 Identities=28% Similarity=0.369 Sum_probs=55.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |+. ||+|++|||++|.+ +.++.+++....+|+++.|+|.|++.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 468999999999999999 999 99999999999984 68999999887779999999999863
No 211
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.77 E-value=7.6e-09 Score=81.17 Aligned_cols=58 Identities=19% Similarity=0.393 Sum_probs=52.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|..|.++|||+++| |++ ||+|++|||++|.+ ++++.+++... +++++|+|.+..
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~~--~~~v~L~V~~~~ 96 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHV-----------GDEILEINGTNVTNHSVDQLQKAMKET--KGMISLKVIPNQ 96 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCT-----------TCEEEEETTBCCCSSCSHHHHHHHHHC--CEEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEECC
Confidence 589999999999999999 999 99999999999995 99999999863 678999988753
No 212
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=1e-08 Score=78.90 Aligned_cols=59 Identities=20% Similarity=0.389 Sum_probs=53.5
Q ss_pred CCcEEEEecccCcccc-cCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGK-AGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~-aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..+.++|||++ +||++ ||.|++|||+++. +++++.+++... ++ +++|+|.|.++
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~-~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHV-----------GDEIREINGISVANQTVEQLQKMLREM-RG-SITFKIVPSYR 86 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEEGGGSCHHHHHHHHHHC-CE-EEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcC-CC-cEEEEEECCcC
Confidence 4689999999999999 89999 9999999999999 999999999874 45 89999999765
No 213
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.76 E-value=7.5e-09 Score=81.87 Aligned_cols=60 Identities=27% Similarity=0.434 Sum_probs=53.3
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++...+.. +|+++.|+|.|+++.
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGDQTTLLVLDKEAE 91 (102)
T ss_dssp SSEEEECCCTTSTTTTTTCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHH--STTEEEEEECSTTCC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCCc
Confidence 689999999999999999999 99999999999998 4788888865 488999999986543
No 214
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=1.3e-08 Score=82.83 Aligned_cols=59 Identities=22% Similarity=0.324 Sum_probs=53.6
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++. ++.++...+.. .|+++.|+|.|+++
T Consensus 54 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 54 NSIYVTKIIDGGAAQKDGRLQV-----------GDRLLMVNNYSLEEVTHEEAVAILKN--TSEVVYLKVGKPTT 115 (117)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCc
Confidence 689999999999999999 999 9999999999999 78888888875 47999999999765
No 215
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.76 E-value=1.6e-08 Score=89.35 Aligned_cols=72 Identities=24% Similarity=0.211 Sum_probs=59.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECC--eEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGT--QLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g--~~~~~~ 386 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.++.+.........+|+.+.++|.|++ .+..+.
T Consensus 35 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~ 103 (196)
T 3gsl_A 35 PSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVME 103 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEECCCCEEEEE
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCCccccEE
Confidence 689999999999999999 999 999999999999988665554443356899999999977 556666
Q ss_pred EEeeeC
Q 015960 387 IILEVE 392 (397)
Q Consensus 387 v~l~~~ 392 (397)
+.+...
T Consensus 104 v~l~~~ 109 (196)
T 3gsl_A 104 IKLIKG 109 (196)
T ss_dssp EEEEEB
T ss_pred EEEecC
Confidence 666544
No 216
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=1.2e-08 Score=81.27 Aligned_cols=59 Identities=25% Similarity=0.406 Sum_probs=53.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. .++.+.|+|.|++.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQV-----------GDRVLSINGVDVTEARHDHAVSLLTA--ASPTIALLLEREAG 99 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHTS--CCSCEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 689999999999999999 999 99999999999988 8888888865 37889999999754
No 217
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=9.8e-09 Score=81.57 Aligned_cols=58 Identities=28% Similarity=0.342 Sum_probs=53.0
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++..++.. ++++.|+|.|+..
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~---~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQE-----------GDQVLAVNDVDFQDIEHSKAVEILKT---AREISMRVRFFSG 100 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH---SSSEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC---CCEEEEEEEECCC
Confidence 589999999999999999999 99999999999999 8999988876 6789999998754
No 218
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=9.9e-09 Score=82.86 Aligned_cols=60 Identities=22% Similarity=0.412 Sum_probs=53.7
Q ss_pred CCcEEEEecccCcccccCc-cccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGL-RSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl-~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.+++||+++|| ++ ||+|++|||++|. ++.++..++... ++++.|+|.|++++
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHE-----------GDEVLEINGIEIRGKDVNEVFDLLSDM--HGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC--CEEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEECCcc
Confidence 5889999999999999999 99 9999999999999 688999988753 36899999998864
No 219
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.74 E-value=1e-08 Score=82.17 Aligned_cols=62 Identities=19% Similarity=0.326 Sum_probs=54.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcC--CCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQC--KVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~--~~g~~v~l~v~R~g~~~ 383 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ +.++..++... ++ +.+.|+|.|.++..
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~-~~v~l~v~R~~~~~ 99 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRIEP-----------GDMLLQVNDMNFENMSNDDAVRVLRDIVHKP-GPIVLTVAKSGGGS 99 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEETTSCCHHHHHHHHHHHHTSS-SCEEEEEECCCC-C
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcccCC-CeEEEEEEeCCCCC
Confidence 689999999999999999 999 99999999999998 89999998764 33 45999999987643
No 220
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.74 E-value=1.8e-08 Score=80.82 Aligned_cols=60 Identities=18% Similarity=0.208 Sum_probs=51.8
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.++|||+++||++ ||+|++|||++|. ++.++.+++.. ..+++++++|.|...
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~-----------GD~Il~VnG~~v~~~~~~dv~~~i~~-~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGARE-----------GDYIVSIQLVDCKWLTLSEVMKLLKS-FGEDEIEMKVVSLLD 105 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT-TTTSCEEEEEESCC-
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEEECCC
Confidence 578999999999999999999 9999999999999 66999988865 345569999988643
No 221
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.74 E-value=1.4e-08 Score=80.15 Aligned_cols=59 Identities=32% Similarity=0.469 Sum_probs=52.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.++ .++...+.. .|+++.|+|.|+++
T Consensus 37 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRLQE-----------GDKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLRVQHRLE 98 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHT--CCSEEEEEEEEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCC
Confidence 689999999999999999 999 999999999999875 677766654 48899999999875
No 222
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.74 E-value=1.7e-08 Score=81.39 Aligned_cols=60 Identities=28% Similarity=0.453 Sum_probs=52.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||++|.+ +.++...+.. .|+++.|+|.|+++.
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRI-----------GDEILEINGETTKNMKHSRAIELIKN--GGRRVRLFLKRGETS 111 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEECCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 588999999999999999 999 99999999999976 4666666654 688999999998764
No 223
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.74 E-value=1.7e-08 Score=78.90 Aligned_cols=57 Identities=30% Similarity=0.450 Sum_probs=51.7
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++..++... ++++.|+|.|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTP-----------GDTIASVNGLNVEGIRHREIVDIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEEC
Confidence 578999999999999999999 99999999999999 69999999874 45899999875
No 224
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.74 E-value=1.3e-08 Score=78.58 Aligned_cols=60 Identities=27% Similarity=0.357 Sum_probs=49.7
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ ..++...+.. .+++.+.+.+.|+++
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLA-----------GDRLVEVNGENVEKETHQQVVSRIRA-ALNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEcCCcc
Confidence 589999999999999999999 99999999999998 6788888766 345555555666654
No 225
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.73 E-value=2.7e-09 Score=95.94 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=65.1
Q ss_pred cccCCCchhHHHHHHcCCCCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCE
Q 015960 292 RPYLGIAHDQLLEKLMGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDE 371 (397)
Q Consensus 292 ~~~lGi~~~~~~~~~~~~~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~ 371 (397)
++++|+.............|++|.+|.++|||+++||++ .||+|++|||+ +.++.|+.+++... +|++
T Consensus 94 ~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~----------~GD~I~~ing~-v~~~~~l~~~l~~~-~g~~ 161 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRP----------HSDYIIGADTV-MNESEDLFSLIETH-EAKP 161 (209)
T ss_dssp SSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCT----------TTEEEEEESSC-CCSSSCHHHHHHHT-TTSC
T ss_pred cCccceEEeecChhHccccceEEEEeCCCChHHHCCCCC----------CCCEEEECCCE-eCCHHHHHHHHHhC-CCCe
Confidence 467787443110000011789999999999999999986 16999999998 99999999999886 8999
Q ss_pred EEEEEEECCeEEEEEEEee
Q 015960 372 VIVRILRGTQLEEILIILE 390 (397)
Q Consensus 372 v~l~v~R~g~~~~~~v~l~ 390 (397)
+.++|+|++....+++++.
T Consensus 162 v~l~v~r~~~~~~~~v~l~ 180 (209)
T 3rle_A 162 LKLYVYNTDTDNCREVIIT 180 (209)
T ss_dssp EEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEECCceEEEEEEEE
Confidence 9999999764344444443
No 226
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.73 E-value=1.7e-08 Score=78.85 Aligned_cols=59 Identities=22% Similarity=0.413 Sum_probs=51.8
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..+.++|||+++| |++ ||+|++|||+++.++ .++...+.. +|+++.|+|.|+++
T Consensus 33 ~~~~V~~v~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 33 SGIFVKSITKSSAVEHDGRIQI-----------GDQIIAVDGTNLQGFTNQQAVEVLRH--TGQTVLLTLMRRGE 94 (97)
T ss_dssp CCCEEEEECTTCHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--CCSEEEEEEEEEEE
T ss_pred CCEEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Confidence 689999999999999999 999 999999999999964 566666654 78999999999875
No 227
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.73 E-value=7.2e-09 Score=78.71 Aligned_cols=58 Identities=29% Similarity=0.416 Sum_probs=51.0
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|..+.++|||+++||++ ||+|++|||+++.++ .++...+.. .+++++++|.|+.
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRA-----------GDQILAVNEINVKKASHEDVVKLIGK--CSGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCT-----------TCEEEEETTEECSSCCHHHHHHHHTT--CSSCEEEEEECCC
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCC
Confidence 478999999999999999999 999999999999998 888887754 3567999999863
No 228
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.73 E-value=7.4e-09 Score=85.63 Aligned_cols=62 Identities=23% Similarity=0.352 Sum_probs=56.8
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. +|+.+.|+|.|+++.++
T Consensus 46 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 46 SGIYVKSVIPGSAAYHNGHIQV-----------NDKIVAVDGVNIQGFANHDVVEVLRN--AGQVVHLTLVRRKTSSS 110 (129)
T ss_dssp CEEEEEEECTTSHHHHHTCCCS-----------SCBEEEETTBCCTTCCHHHHHHHHHH--CCSSEEEEEEEESSSSS
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcccc
Confidence 689999999999999999 999 99999999999999 8999999877 78899999999886543
No 229
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.72 E-value=2e-08 Score=80.02 Aligned_cols=60 Identities=18% Similarity=0.336 Sum_probs=52.7
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. +|+++.|+|.|+++.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 38 LGIYVKSVVKGGAADVDGRLAA-----------GDQLLSVDGRSLVGLSQERAAELMTR--TSSVVTLEVAKQGAI 100 (106)
T ss_dssp EEEEEEEEBTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEECCCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 589999999999999999 999 99999999999984 6677776654 689999999998763
No 230
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.5e-08 Score=81.83 Aligned_cols=59 Identities=32% Similarity=0.483 Sum_probs=54.2
Q ss_pred CcEEEEecccCcccc-cCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 311 GGVIFIAVEEGPAGK-AGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 311 g~~V~~v~~~spa~~-aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
+++|..|.++|||++ +||++ ||+|++|||+++.+ +.++.+++.. +|+.+.|+|.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKV-----------GDRILAVNGQSIINMPHADIVKLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCT-----------TCBEEEETTBCTTTSCHHHHHHHHHH--TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 569999999999999 99999 99999999999998 6999999876 789999999998764
No 231
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.71 E-value=2.1e-08 Score=77.67 Aligned_cols=59 Identities=32% Similarity=0.369 Sum_probs=51.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ ..++...+.. +++++.|+|.|.+.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQ-----------GDQILMVNGEDVRNATQEAVAALLKC--SLGTVTLEVGRIST 90 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcccc
Confidence 689999999999999999 999 99999999999986 4666666654 57889999999763
No 232
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=1.4e-08 Score=81.16 Aligned_cols=60 Identities=23% Similarity=0.370 Sum_probs=54.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++. ++.++...+.. .|+++.|+|.|+++.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCS-----------SCEEEEETTEECBSCTTSHHHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 689999999999999999 999 9999999999998 67788888765 489999999998764
No 233
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=9.5e-09 Score=83.53 Aligned_cols=59 Identities=20% Similarity=0.268 Sum_probs=54.0
Q ss_pred CcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 311 GGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 311 g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
+++|..|.+++||+++| |++ ||+|++|||+++ .+++++.+++.. .|+.+.|+|.|+++.
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHP-----------GDHILSIDGTSMEHCSLLEATKLLAS--ISEKVRLEILPVPQS 104 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCT-----------TCBEEEETTEETTSCCHHHHHHHHHS--CSSEEEEEECCBTTB
T ss_pred CEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEECCCC
Confidence 48999999999999999 999 999999999999 679999999974 689999999998764
No 234
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=1.4e-08 Score=78.72 Aligned_cols=69 Identities=35% Similarity=0.509 Sum_probs=58.3
Q ss_pred ccCCCchhHHHHHHcCCCCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec-CCHHHHHHHHhcCCCCC
Q 015960 293 PYLGIAHDQLLEKLMGISGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV-SNANDLHNILDQCKVGD 370 (397)
Q Consensus 293 ~~lGi~~~~~~~~~~~~~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v-~~~~d~~~~l~~~~~g~ 370 (397)
.+||+.... ...+++|..|.++|||+++| |++ ||+|++|||+++ .+++++.+++.. .++
T Consensus 18 ~~lG~~i~~------~~~~v~V~~V~~~spA~~ag~L~~-----------GD~I~~ing~~v~~~~~~~~~~l~~--~~~ 78 (91)
T 2e7k_A 18 EHLGVTFRV------EGGELVIARILHGGMVAQQGLLHV-----------GDIIKEVNGQPVGSDPRALQELLRN--ASG 78 (91)
T ss_dssp CCCCEEEEE------SSSSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCHHHHHHHHHT--CCS
T ss_pred CcEeEEEEe------cCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCHHHHHHHHHc--CCC
Confidence 567775543 13689999999999999987 999 999999999999 999999999976 367
Q ss_pred EEEEEEEECC
Q 015960 371 EVIVRILRGT 380 (397)
Q Consensus 371 ~v~l~v~R~g 380 (397)
++.|+|.|..
T Consensus 79 ~v~l~v~~~~ 88 (91)
T 2e7k_A 79 SVILKILSGP 88 (91)
T ss_dssp SBCEEEECCS
T ss_pred eEEEEEEECC
Confidence 8999998853
No 235
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.70 E-value=8.1e-09 Score=85.20 Aligned_cols=63 Identities=24% Similarity=0.247 Sum_probs=58.0
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++..++... +++.+.++|.|+|+.++
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRETDEFF 97 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-CSEEEEEEECHHHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCEEEEEEEeCCcceE
Confidence 589999999999999999999 99999999999999 99999999875 78889999999887655
No 236
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.70 E-value=1.5e-08 Score=80.91 Aligned_cols=60 Identities=25% Similarity=0.369 Sum_probs=53.2
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.+++|..+.++|||+++||++ ||+|++|||+++. ++.++..++.. .|+++.|+|.|.+.+
T Consensus 43 p~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRK-----------GDRILEVNGVNVEGATHKQVVDLIRA--GEKELILTVLSVESE 104 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEECSSCC
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEcCCCC
Confidence 345799999999999999999 9999999999999 78999998875 589999999997653
No 237
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.70 E-value=1.4e-08 Score=79.49 Aligned_cols=58 Identities=19% Similarity=0.249 Sum_probs=47.9
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+. .+....+. .+++++.|+|.|..
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVSYALFK--GANGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TCSSEEEEEEECCC
T ss_pred CcEEEEEeCCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--cCCCcEEEEEEeCC
Confidence 689999999999999999 999 999999999999863 33344443 35678999999853
No 238
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.70 E-value=2.1e-08 Score=89.04 Aligned_cols=61 Identities=23% Similarity=0.353 Sum_probs=56.9
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.++|||+++| |++ ||+|++|||+++. ++.++..++....+|++++++|.|+++
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 99 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCS-----------SCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCC
Confidence 578999999999999999 999 9999999999999 689999999887779999999999985
No 239
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.70 E-value=6.9e-09 Score=84.80 Aligned_cols=62 Identities=21% Similarity=0.328 Sum_probs=53.4
Q ss_pred CCcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.++|||+++ ||++ ||+|++|||+++.+ +.++...+.. .+++++|+|.|+++..+
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRV-----------GDRIVTICGTSTEGMTHTQAVNLLKN--ASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHH--CCSEEEEEEECCTTSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccce
Confidence 47899999999999999 9999 99999999999987 5677777765 46789999999987543
No 240
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=1.9e-08 Score=81.77 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=53.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. +++.+.|+|.|+++.
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLME-----------GMQVLEWNGIPLTSKTYEEVQSIISQ--QSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHHHHSC--CSSCEEEEEESSCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhc--CCCEEEEEEEECCcc
Confidence 478999999999999999 999 99999999999976 6788887765 678899999998764
No 241
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.69 E-value=1.3e-08 Score=80.70 Aligned_cols=59 Identities=32% Similarity=0.444 Sum_probs=49.9
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. +++++.++|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKN--AGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--SCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECcc
Confidence 489999999999999999 999 99999999999965 4555555543 68899999999754
No 242
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=2.9e-08 Score=76.72 Aligned_cols=54 Identities=24% Similarity=0.439 Sum_probs=49.3
Q ss_pred EEEEecccCcccccCccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 313 VIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 313 ~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
+|..|.++|||+++||++ ||+|++|||+++ .++.++..++.. .|+++.|+|.+.
T Consensus 34 ~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATPHEKIVHILSN--AVGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHTCCS-----------SCEEEEETTEECTTSCHHHHHHHHHH--CCEEEEEEEECC
T ss_pred EEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEC
Confidence 899999999999999999 999999999999 579999999975 488999998875
No 243
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.69 E-value=3.6e-08 Score=87.25 Aligned_cols=69 Identities=29% Similarity=0.361 Sum_probs=58.8
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEE---CCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILR---GTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R---~g~~~~ 384 (397)
.|++|..|.++|||++ ||++ ||+|++|||+++.+. .++...+.. .++.+.|+|+| +|+.++
T Consensus 24 ~g~~V~~v~~~spA~~-gl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~~G~~~~ 89 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELIIVREVGNGAKQE 89 (195)
T ss_dssp CSEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEEECSSSCEEE
T ss_pred CCEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEcCCCCCCce
Confidence 6899999999999999 9999 999999999999875 455555544 46699999999 899998
Q ss_pred EEEEeeeC
Q 015960 385 ILIILEVE 392 (397)
Q Consensus 385 ~~v~l~~~ 392 (397)
+.+++...
T Consensus 90 ~~v~~~~~ 97 (195)
T 2qbw_A 90 IRVRVEKD 97 (195)
T ss_dssp EEEEEECC
T ss_pred eEeEeecc
Confidence 88887643
No 244
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.69 E-value=3e-08 Score=79.41 Aligned_cols=58 Identities=31% Similarity=0.453 Sum_probs=52.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|..|.++|||+++||++ ||+|++|||++|.++ .++...+.. .|+++.|+|.|.+
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVT 104 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--TTTEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEECC
Confidence 489999999999999999999 999999999999998 888888876 3788999998743
No 245
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=3.3e-08 Score=77.37 Aligned_cols=59 Identities=31% Similarity=0.567 Sum_probs=51.9
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..+.+ +|+++||++ ||+|++|||+++.+ +.++.+++...++|+++.|+|.|+++
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCE-----------GDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCS-----------SCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEec--ccccCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 3688999988 378999999 99999999999986 48999999886669999999999875
No 246
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.68 E-value=2.2e-08 Score=80.40 Aligned_cols=60 Identities=28% Similarity=0.462 Sum_probs=53.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++. ++.++..++.. .|+++.|+|.|++..
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQT-----------GDHILKIGGTNVQGMTSEQVAQVLRN--CGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCS-----------SCEEEEESSCCCTTSCHHHHHHHHHH--HCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCCC
Confidence 589999999999999999 999 9999999999998 46888888765 478999999998764
No 247
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.67 E-value=1.1e-06 Score=78.35 Aligned_cols=176 Identities=11% Similarity=0.156 Sum_probs=112.5
Q ss_pred HHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCC-CeEEEEecCCcEEEE----EEEEEcCCC
Q 015960 87 FEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGA-SSVKVTLFDKTTLDA----KVVGHDQGT 161 (397)
Q Consensus 87 ~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~-~~i~V~~~~g~~~~a----~vv~~d~~~ 161 (397)
+.-+...|+.+.+.+. .....--|+.+. .||+|++|..+.. ..+.|+...|+..-. --+..-+..
T Consensus 19 yn~Ia~~ic~l~n~sd--------g~~~~l~gigyG--~~iItn~HLf~~nnG~L~I~s~hG~f~v~nt~~lki~~i~g~ 88 (229)
T 1lvm_A 19 YNPISSTICHLTNESD--------GHTTSLYGIGFG--PFIITNKHLFRRNNGTLLVQSLHGVFKVKNTTTLQQHLIDGR 88 (229)
T ss_dssp CHHHHTTEEEEEEEET--------TEEEEEEEEEET--TEEEECGGGGGCCSSEEEEEETTEEEEESCGGGSEEEECTTS
T ss_pred CChhheEEEEEEeccC--------CceEEEEEEeEC--CEEEeChhhhccCCCcEEEEeCCCeEEeCCCCceeeEEeCCc
Confidence 4456677889987532 112233566665 3999999999865 788998876642210 013345789
Q ss_pred CeEEEEEcCCCCCcceeecCC-CCCCCCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCc
Q 015960 162 DLAVLHIDAPNHKLRSIPVGV-SANLRIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNS 240 (397)
Q Consensus 162 DlAlL~v~~~~~~~~~~~l~~-s~~~~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 240 (397)
||.++|++. ++||.+-.. -..++.||+|.++|.-+..... ...||......... + ..+...=.....|+-
T Consensus 89 DiiiIrmPk---DfpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~--~s~vSesS~i~p~~-~---~~fWkHwIsT~~G~C 159 (229)
T 1lvm_A 89 DMIIIRMPK---DFPPFPQKLKFREPQREERICLVTTNFQTKSM--SSMVSDTSCTFPSS-D---GIFWKHWIQTKDGQC 159 (229)
T ss_dssp SCEEEECCT---TSCCCCSCCCBCCCCTTCEEEEEEEECSSSSC--EEEECCCEECEEET-T---TTEEEECBCCCTTCT
T ss_pred cEEEEeCCC---cCCCcccccccCCCCCCCeEEEEEeEeecCCc--cEEECCcceeEecC-C---CCEeEEEeeCCCCcC
Confidence 999999987 455544322 1458999999999976543322 22333322211111 1 345666677789999
Q ss_pred ccceecC-CccEEEEEeeeeccCCCccCceeeEeccc-hhHHHHHHH
Q 015960 241 GGPLLDS-SGSLIGVNTSIITRTDAFCGMACSIPIDT-VSGIVDQLV 285 (397)
Q Consensus 241 GGPlvn~-~G~vVGI~s~~~~~~~~~~~~~~aip~~~-i~~~~~~l~ 285 (397)
|.|+++. +|.+|||++....... .+|+.|+.. +.++++...
T Consensus 160 GlPlVs~~Dg~IVGiHsl~~~~~~----~NyF~~f~~~f~~~L~~~~ 202 (229)
T 1lvm_A 160 GSPLVSTRDGFIVGIHSASNFTNT----NNYFTSVPKNFMELLTNQE 202 (229)
T ss_dssp TCEEEETTTCCEEEEEEEEETTSC----SEEEEECCTTHHHHHHCGG
T ss_pred CCcEEECCCCcEEEEEcccccCCC----eEEEeCCCHHHHHHHhccc
Confidence 9999986 9999999998865432 588888854 335555443
No 248
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.67 E-value=1.4e-08 Score=81.05 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=47.9
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|.+|.++|||+++| |++ ||+|++|||++|.+. .+....+. .+++++.++|.|..
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFK--GANGKVSMEVTRPK 85 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCT-----------TCEEEEESSCBCSSSCHHHHHHHHH--SCBSCEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCC
Confidence 689999999999999999 999 999999999999864 33444443 35667999999963
No 249
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.67 E-value=1.6e-08 Score=82.37 Aligned_cols=61 Identities=31% Similarity=0.426 Sum_probs=51.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.++.+.........+++++.++|.|+++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE 99 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 689999999999999999 999 9999999999999886544333333478999999999753
No 250
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.66 E-value=2e-08 Score=80.58 Aligned_cols=61 Identities=20% Similarity=0.286 Sum_probs=54.7
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCC--CCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCK--VGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~--~g~~v~l~v~R~g~ 381 (397)
.+++|..|.+++||+++| |++ ||.|++|||+++.+ +.++.++|+... .+++++|++.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~-----------GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKP-----------GDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCT-----------TCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 478999999999999999 999 99999999999987 889999997643 48899999999875
No 251
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.66 E-value=2e-08 Score=82.92 Aligned_cols=59 Identities=24% Similarity=0.326 Sum_probs=53.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++ .++.++..++.. .++++.|+|.|+++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAV-----------NDEVLEVNGIEVSGKSLDQVTDMMIA--NSRNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCT-----------TCEEEEETTEESTTCCHHHHHHHHHH--TTTSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCc
Confidence 578999999999999999 899 999999999999 778999998874 45679999999875
No 252
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.66 E-value=2e-08 Score=79.14 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=51.3
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.++|||+++||++ ||+|++|||+++.+ +.++..++.. .++++.|+|+|++.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCS-----------SCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 568899999999999999999 99999999999994 6888888876 35569999999753
No 253
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.66 E-value=7.7e-09 Score=84.27 Aligned_cols=63 Identities=21% Similarity=0.275 Sum_probs=54.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++. ++.++..++.. .++..+.+++.|+++.++
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~-~~~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQK-----------GNEVLSINGKSLKGTTHHDALAILRQ-AREPRQAVIVTRKLTPEA 107 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCT-----------TCBCCEETTEECSSCCHHHHHHHHHH-TTSSSEEEEEEECCCSSS
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEEcCCCccc
Confidence 589999999999999999 999 9999999999999 58888888866 356667788999887544
No 254
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.65 E-value=5.2e-09 Score=84.43 Aligned_cols=66 Identities=20% Similarity=0.246 Sum_probs=56.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~ 386 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. .|+++.|+|.|+++..+++
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~~~~~ 101 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFMIGRERPGEQSE 101 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCSCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--SCSSCEEEEEECCCCTTSS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCCCCcch
Confidence 689999999999999999 999 99999999999985 6666666665 4888999999998866555
Q ss_pred EE
Q 015960 387 II 388 (397)
Q Consensus 387 v~ 388 (397)
+.
T Consensus 102 v~ 103 (113)
T 2g5m_B 102 VA 103 (113)
T ss_dssp CS
T ss_pred hh
Confidence 43
No 255
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.65 E-value=1.3e-08 Score=83.96 Aligned_cols=61 Identities=30% Similarity=0.365 Sum_probs=54.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcC-----CCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQC-----KVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~-----~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++.+ +.++..+|... +++++|.|+|.|+++
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRM-----------NDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCS-----------CCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 478999999999999999 999 99999999999987 66888888764 358899999999875
No 256
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.65 E-value=3.6e-07 Score=77.55 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=77.4
Q ss_pred CCCCeEEEEEcCCC---CCcceeecCCCCCCCCCCeEEEEecCCCCC--------CceeeeEEeeccccc---cCCCCCC
Q 015960 159 QGTDLAVLHIDAPN---HKLRSIPVGVSANLRIGQKVYAIGHPLGRK--------FTCTAGIISAFGLEP---ITATGPP 224 (397)
Q Consensus 159 ~~~DlAlL~v~~~~---~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~--------~~~~~G~vs~~~~~~---~~~~~~~ 224 (397)
..+||||||++.+- ..+.++.|.... ...|+.+++.||..... .......+.-+.... ... ...
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~-~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~ 83 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQE-PELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHP-DKV 83 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSC-CCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCS-SBC
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCC-CCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhc-CCC
Confidence 46899999999862 357788886543 46799999999975321 112222222222111 110 001
Q ss_pred cccEEEEc-----cccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 225 IQGLIQID-----AAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 225 ~~~~i~~~-----~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
....+... ...|.|+|||||+- +|+++||+|++..........+....+...++|+++.++
T Consensus 84 ~~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 84 TESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp CTTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 12334432 35799999999995 589999999973333322335667788888888887654
No 257
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.65 E-value=2.8e-08 Score=77.39 Aligned_cols=57 Identities=30% Similarity=0.367 Sum_probs=49.4
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|..|.++|||++ ||++ ||+|++|||+++.+ +.++...+. .+++++.|+|.|+.
T Consensus 35 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIVREV 93 (95)
T ss_dssp CCEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCBHHHHHHHHH--HCCSEEEEEEEEEC
T ss_pred CCEEEEEECCCCchhh-CCCC-----------CCEEEEECCEEcCCCCHHHHHHHhh--cCCCeEEEEEEeCC
Confidence 6899999999999999 9999 99999999999987 555656654 46899999999964
No 258
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.65 E-value=3.7e-08 Score=80.14 Aligned_cols=58 Identities=16% Similarity=0.367 Sum_probs=52.7
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++. ++.++..++.. .++++.|+|.|..
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~v~R~~ 113 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKT-----------GDILLNVDGVELTEVSRSEAVALLKR--TSSSIVLKALEVK 113 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCT-----------TCEEEEETTEEGGGSCHHHHHHHHHS--CCSEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 688999999999999999 999 9999999999999 88999988875 4788999999853
No 259
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.64 E-value=4.4e-08 Score=76.02 Aligned_cols=60 Identities=23% Similarity=0.454 Sum_probs=51.6
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.+++|..+.++|||+++| |++ ||+|++|||+++ .++.++..++... ++++.|+|.|..++
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~~~~ 90 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHV-----------GDELREVNGIPVEDKRPEEIIQILAQS--QGAITFKIIPGSKE 90 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEESTTSCHHHHHHHHHHC--CEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEeCCCC
Confidence 578999999999999999 999 999999999999 7899999999763 34899999986553
No 260
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=6.7e-09 Score=85.60 Aligned_cols=59 Identities=25% Similarity=0.336 Sum_probs=54.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||++|. ++.++.+++.. .|+++.|+|.|+++
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCT-----------GDRIIKVNGESVIGKTYSQVIALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCS-----------SCCCCEETTEECSSCCHHHHHHHHHT--CTTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCC
Confidence 678999999999999999999 9999999999998 89999999876 38999999999875
No 261
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=3.6e-08 Score=76.39 Aligned_cols=59 Identities=25% Similarity=0.335 Sum_probs=50.8
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .++++.|+|.|+.+
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKR-----------GDQLLSVNGVSVEGEQHEKAVELLKA--AQGSVKLVVRSGPS 91 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCT-----------TCBEEEETTEECTTSCHHHHHHHHHH--CCSEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEEEEeCCC
Confidence 588999999999999996 999 99999999999995 6788877765 35689999998753
No 262
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.63 E-value=8.2e-08 Score=95.73 Aligned_cols=71 Identities=30% Similarity=0.434 Sum_probs=63.7
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEEEe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILIIL 389 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 389 (397)
.|++|.+|.++|||+++||++ ||+|++|||++|.+++|+.+++.. .+ +.+.|+|.|+|+.+++.+..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~l~~-~~-~~v~l~v~R~g~~~~~~~~~ 429 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQK-----------DDVIIGVNRDRVNSIAEMRKVLAA-KP-AIIALQIVRGNESIYLLMRL 429 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHh-CC-CeEEEEEEECCEEEEEEEEe
Confidence 489999999999999999999 999999999999999999999987 33 48999999999998888777
Q ss_pred eeCC
Q 015960 390 EVEP 393 (397)
Q Consensus 390 ~~~~ 393 (397)
..+.
T Consensus 430 ~~~~ 433 (436)
T 4a8c_A 430 EHHH 433 (436)
T ss_pred cccC
Confidence 6553
No 263
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=1.1e-08 Score=80.99 Aligned_cols=60 Identities=28% Similarity=0.431 Sum_probs=52.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+. .+|+++.|+|.|+++.
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRV-----------GDQIIEINGESTRDMTHARAIELIK--SGGRRVRLLLKRGTGS 98 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCT-----------TCEEEEETTEECSSCCHHHHHHHHH--HHCSEECEEEECTTCS
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCCCeEEEEEEECCCC
Confidence 378999999999999999 999 99999999999987 466666665 4688999999998763
No 264
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.63 E-value=2.5e-08 Score=80.74 Aligned_cols=61 Identities=33% Similarity=0.401 Sum_probs=53.5
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. .++++.|+|.|+++..
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWA-----------GDQILEVNGVDLRNSSHEEAITALRQ--TPQKVRLVVYRDEAHY 106 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCT-----------TCEEEEETTEECSSSCHHHHHHHHHT--CCSEEEEEEECCSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Confidence 589999999999999999 999 99999999999988 6788877765 3489999999988643
No 265
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.63 E-value=2e-08 Score=78.63 Aligned_cols=57 Identities=21% Similarity=0.194 Sum_probs=50.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcC-CCCCEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQC-KVGDEVIVRIL 377 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~-~~g~~v~l~v~ 377 (397)
.+.+|..|.++|||++|||++ ||+|++|||++|. +|+|+...+... ..|+.+.|.|-
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~-----------GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQV-----------GRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCT-----------TCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 467899999999999999999 9999999999984 999999999764 45788888775
No 266
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.63 E-value=2.9e-08 Score=81.93 Aligned_cols=59 Identities=15% Similarity=0.130 Sum_probs=54.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC---CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS---NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~---~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++. ++.++..++.. .++++.|+|.|+..
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKE-----------NDQILAINHTPLDQNISHQQAIALLQQ--TTGSLRLIVAREPV 116 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCS-----------SCBEEEESSCBCSTTSCHHHHHHHHHH--CCSEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--CCCeEEEEEEcCCC
Confidence 489999999999999999 999 9999999999998 88999988876 57899999999864
No 267
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=3.3e-08 Score=80.63 Aligned_cols=61 Identities=33% Similarity=0.448 Sum_probs=53.0
Q ss_pred CCCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 309 ISGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 309 ~~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
..|++|..|.+++||+++| |++ ||+|++|||++|.++ .++..++.. .++++.|+|.|+++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQE-----------GDKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLRVQHRLQV 109 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCT-----------TCEEEEETTEECCSCCHHHHHHHHHH--HCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 3689999999999999999 999 999999999999985 477777764 478999999998764
No 268
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.61 E-value=2.1e-08 Score=79.03 Aligned_cols=60 Identities=13% Similarity=0.137 Sum_probs=51.2
Q ss_pred CCcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCCH-HHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSNA-NDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~~-~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.+++|..|.++|||+++ ||++ ||+|++|||+++.++ .++...+.. .++.+.|+|.|+++.
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~--~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRT-----------GDELVNINGTPLYGSRQEALILIKG--SFRILKLIVRRRNSG 96 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCT-----------TCEEEEETTEECCSCSHHHHHHHHT--CCSSCEEEEEECCCS
T ss_pred CCeEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEccchHHHHHHHHHh--CCCeEEEEEEeCCCC
Confidence 36889999999999999 9999 999999999999985 556666654 468899999998763
No 269
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.61 E-value=2.7e-08 Score=80.09 Aligned_cols=58 Identities=21% Similarity=0.341 Sum_probs=52.1
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.+++|..+.+++||+++||++ ||+|++|||++|. +++|+.+++... .++++.|+|+|.
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~-----------GD~Il~InG~~v~~~~~~d~~~~i~~~-~~~~v~l~V~~~ 95 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKE-----------GDYIVSIQGVDCKWLTVSEVMKLLKSF-GGEEVEMKVVSL 95 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCT-----------TCEEEEETTEECSSCCHHHHHHHHHHT-TTSEECEEEECE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEEec
Confidence 568899999999999999999 9999999999999 999999998763 567899999873
No 270
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.61 E-value=4.4e-08 Score=75.50 Aligned_cols=57 Identities=28% Similarity=0.331 Sum_probs=48.9
Q ss_pred CCcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.|++|..|.++|||+++ ||++ ||+|++|||+++.+ +.++...+.. .++++.++|.|-
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~ 89 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKK--TGKEVVLEVKYM 89 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEEe
Confidence 57899999999999999 9999 99999999999986 5666666654 578899999873
No 271
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.60 E-value=4.8e-08 Score=86.16 Aligned_cols=62 Identities=27% Similarity=0.342 Sum_probs=56.1
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
.|++|..|.++|||+++| |++ ||+|++|||++|.+ +.++..++.. .++.+.|+|.|+++...
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQI-----------GDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAET 194 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCBHHHHHHHHHS--CCEEEEEEEEEESCCCE
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCCcCCCCCHHHHHHHHHc--CCCeEEEEEeCCCCccc
Confidence 588999999999999999 999 99999999999998 9999999865 47899999999887544
No 272
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=2.1e-08 Score=80.01 Aligned_cols=59 Identities=24% Similarity=0.267 Sum_probs=51.7
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++..++.. .++++.|+|.|++.
T Consensus 40 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 40 LGIFVKTVTEGGAAQRDGRIQV-----------NDQIVEVDGISLVGVTQNFAATVLRN--TKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEECTTCHHHHHCSSCT-----------TCBEEEETTEECBSCCHHHHHHHHHH--CCSEEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Confidence 689999999999999999 999 99999999999985 6666676665 48999999999754
No 273
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.59 E-value=6e-08 Score=97.08 Aligned_cols=65 Identities=31% Similarity=0.483 Sum_probs=59.9
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILI 387 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v 387 (397)
.|++|.+|.++|||+++||++ ||+|++|||++|.+++|+.+++.. .++.+.|+|.|+|+.+.+.+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~-----------GD~I~~Vng~~v~~~~~~~~~l~~--~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRP-----------GDIIISANKKPVTDVKSLQTIAQE--KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHTTS--SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhc--CCCeEEEEEEECCEEEEEEe
Confidence 478999999999999999999 999999999999999999999976 57889999999999887765
No 274
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.59 E-value=6.3e-09 Score=84.09 Aligned_cols=66 Identities=24% Similarity=0.239 Sum_probs=54.0
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHH--HHHHHhcCCCCCEEEEEEEEC-CeEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNAND--LHNILDQCKVGDEVIVRILRG-TQLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d--~~~~l~~~~~g~~v~l~v~R~-g~~~~~~ 386 (397)
.|++|..|.+++||+++||++ ||+|++|||+++.++.+ +...+.. ++++.++|+|+ ++..++.
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~---~~~v~l~v~r~~g~~~~~~ 106 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEI-----------GDQIVEVNGVDFSNLDHKEAVNVLKS---SRSLTISIVAAAGRELFMT 106 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEETTSCCTTHHHHHHHH---CSSEEEEECSSTTTHHHHS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc---CCeEEEEEEcCCCCceEEE
Confidence 589999999999999999999 99999999999999854 6666654 35799999998 8765444
Q ss_pred EEe
Q 015960 387 IIL 389 (397)
Q Consensus 387 v~l 389 (397)
+++
T Consensus 107 ~~~ 109 (114)
T 1x5n_A 107 DRS 109 (114)
T ss_dssp SCC
T ss_pred ecc
Confidence 443
No 275
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.58 E-value=8.4e-08 Score=84.87 Aligned_cols=58 Identities=24% Similarity=0.372 Sum_probs=53.8
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||++|.+ +.++...+.. |+.+.|+|.|+|+
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~---~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQV-----------GDEIVRINGYSISSCTHEEVINLIRT---EKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHTS---SSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHcC---CCeEEEEEEECCc
Confidence 478999999999999999999 99999999999998 8898888765 8899999999987
No 276
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.57 E-value=1.2e-07 Score=73.58 Aligned_cols=53 Identities=26% Similarity=0.324 Sum_probs=46.0
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRIL 377 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~ 377 (397)
.|++|..|.++|||+++||++ ||+|++|||++|. +++++..++.+ ..++++|.
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~-----------GD~Il~vng~~v~~~~~~~l~~~l~~----~~l~ltV~ 89 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ----PSLGLLVR 89 (94)
T ss_dssp CEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHS----SEEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC----CeEEEEEE
Confidence 579999999999999999999 9999999999999 47899988863 34666655
No 277
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.57 E-value=1.1e-07 Score=78.91 Aligned_cols=60 Identities=30% Similarity=0.431 Sum_probs=52.3
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||+. ||+|++|||++|.+ +.++...+.. .|+++.|+|.|..+.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVTRH 126 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCT-----------TCEEEEESSSBCTTSCHHHHHHHHHH--TTTEEEEEEECCCC-
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCCC
Confidence 489999999999999999999 99999999999984 6777777765 678999999987653
No 278
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=2.1e-08 Score=80.60 Aligned_cols=59 Identities=29% Similarity=0.414 Sum_probs=53.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++. ++.++..++.. .++++.|+|.|+..
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRLRV-----------GLRLLEVNQQSLLGLTHGEAVQLLRS--VGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSCCT-----------TCBCCBBSSCBCTTSCHHHHHHHHSS--CSSEEEECCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 689999999999999999 999 9999999999999 68888888765 68999999998754
No 279
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=1.1e-07 Score=75.78 Aligned_cols=59 Identities=32% Similarity=0.510 Sum_probs=51.0
Q ss_pred CCcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++ ||++ ||+|++|||+++.+ +.++...+.. +++++.|+|.|++.
T Consensus 41 ~gv~V~~V~~~spA~~aggL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGLQI-----------HDRIIEVNGRDLSRATHDQAVEAFKT--AKEPIVVQVLRRTS 102 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCCCS-----------SCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEEECCS
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEEeCCC
Confidence 68999999999999999 9999 99999999999976 5666666654 57789999999753
No 280
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.56 E-value=1.5e-07 Score=83.71 Aligned_cols=59 Identities=25% Similarity=0.400 Sum_probs=52.9
Q ss_pred CCcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++ ||+. ||+|++|||+++.++ .++..++.. +|+++.++|.|+++
T Consensus 33 ~~~~V~~v~~~spA~~aggl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 94 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAARSDQLDV-----------GDYIKAVNGINLAKFRHDEIISLLKN--VGERVVLEVEYELP 94 (200)
T ss_dssp SCSEEEEECTTSHHHHTTSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--CCSEEEEEEEEECC
T ss_pred CCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEeccCC
Confidence 57899999999999999 9999 999999999999999 888877754 58899999999763
No 281
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.56 E-value=3.3e-08 Score=81.15 Aligned_cols=60 Identities=20% Similarity=0.304 Sum_probs=51.6
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .++++.|+|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRI-----------GDELLEINNQILYGRSHQNASAIIKT--APSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCT-----------TCEECEESSCBCTTSCHHHHHHHHHH--SCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Confidence 588999999999999999 999 99999999999976 6666666654 457999999998764
No 282
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.56 E-value=6.9e-08 Score=77.18 Aligned_cols=58 Identities=31% Similarity=0.291 Sum_probs=51.5
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++.+ +.++..++... +++++.|+|.|.
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~v~R~ 104 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLP-----------GDRLVSVNEYCLDNTSLAEAVEILKAV-PPGLVHLGICSG 104 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHHS-CSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEEEcC
Confidence 678999999999999999 999 99999999999965 78999888764 456899999985
No 283
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.56 E-value=6.8e-08 Score=85.85 Aligned_cols=61 Identities=26% Similarity=0.377 Sum_probs=56.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g~~~ 383 (397)
.|++|..+.++|||+++| |++ ||+|++|||+++. ++.++..++.. +++.+.|+|.|+++.+
T Consensus 135 ~g~~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~ 198 (200)
T 2qt5_A 135 RPVVITCVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEATLLIEYDVSVM 198 (200)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TCSEEEEEEEEEEEC-
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccC
Confidence 588999999999999999 999 9999999999999 99999999976 7899999999987754
No 284
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.55 E-value=1.6e-07 Score=83.72 Aligned_cols=69 Identities=22% Similarity=0.290 Sum_probs=55.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC----HHHHHHHHhcCCCCCEEEEEEEECCeEE-
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN----ANDLHNILDQCKVGDEVIVRILRGTQLE- 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~----~~d~~~~l~~~~~g~~v~l~v~R~g~~~- 383 (397)
.|++|.+|.++|||+++| |+. ||+|++|||+++.+ +.++...+.. ..+.++.++|+|+++..
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~~~-~~~~~v~l~v~R~~~~~~ 112 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKI-----------FDHICDINGTPIHVGSMTTLKVHQLFHT-TYEKAVTLTVFRADPPEL 112 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECCGGGSCHHHHHHHHHS-CCSSEEEEEEECCSSCCE
T ss_pred CCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEEcCCCccCHHHHHHHHHh-cCCCceEEEEEecccCCC
Confidence 589999999999999998 999 99999999999998 6666666654 33444999999987654
Q ss_pred -EEEEEee
Q 015960 384 -EILIILE 390 (397)
Q Consensus 384 -~~~v~l~ 390 (397)
.+.+.+.
T Consensus 113 ~~~~v~l~ 120 (206)
T 3r0h_A 113 EKFNVDLM 120 (206)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 4444444
No 285
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=4.6e-08 Score=76.45 Aligned_cols=57 Identities=23% Similarity=0.277 Sum_probs=49.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.+++|..|.++|||+ +||++ ||+|++|||++|.+ +.++...+.. +|+++.|+|.|++
T Consensus 31 ~~~~V~~V~~~spA~-agL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFP-----------GDQILQMNNEPAEDLSWERAVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCT-----------TCBEEEESSCBSTTCCHHHHHHHHHH--CSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 578999999999995 99999 99999999999987 5666666654 6889999999976
No 286
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.54 E-value=9.1e-08 Score=73.52 Aligned_cols=58 Identities=26% Similarity=0.374 Sum_probs=50.5
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|.+|.++|||+++| |+. ||+|++|||+++ .+++++.+++... +.++.|++.+.-
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~~--~~~v~L~v~~~~ 81 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHE-----------GDIILKINGTVTENMSLTDARKLIEKS--RGKLQLVVLRDL 81 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEECCC-
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEeCCC
Confidence 378999999999999999 999 999999999999 7889999998863 458888887643
No 287
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.53 E-value=2.5e-07 Score=90.84 Aligned_cols=68 Identities=26% Similarity=0.422 Sum_probs=59.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe---EEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ---LEE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~---~~~ 384 (397)
.+++|..+.++|||+++||++ ||+|++|||+++.++ .++...+.. .+|++++|+|.|+|+ .++
T Consensus 99 ~~~~V~~v~~~spA~~aGl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~r~g~~~~~~~ 166 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAGARA-----------GDVIVTVDGTAVKGMSLYDVSDLLQG-EADSQVEVVLHAPGAPSNTRT 166 (388)
T ss_dssp SCEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHCB-STTCEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc-CCCCEEEEEEEeCCCCcceEE
Confidence 679999999999999999999 999999999999996 788887765 679999999999988 555
Q ss_pred EEEEe
Q 015960 385 ILIIL 389 (397)
Q Consensus 385 ~~v~l 389 (397)
++++.
T Consensus 167 ~~l~r 171 (388)
T 1fc6_A 167 LQLTR 171 (388)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 65543
No 288
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.53 E-value=1.4e-07 Score=76.17 Aligned_cols=57 Identities=21% Similarity=0.352 Sum_probs=50.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.+++|..|.++|||+++| |++ ||+|++|||+++ .++.++..++... ++++.|+|++.
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~ 109 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQEV--KGEVTIHYNKL 109 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC--CSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEec
Confidence 478999999999999999 999 999999999999 8999999988753 35688888653
No 289
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.52 E-value=2.1e-08 Score=81.56 Aligned_cols=58 Identities=26% Similarity=0.302 Sum_probs=51.1
Q ss_pred CcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCC--CCCEEEEEEEEC
Q 015960 311 GGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCK--VGDEVIVRILRG 379 (397)
Q Consensus 311 g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~--~g~~v~l~v~R~ 379 (397)
.++|..|.++|||+++ ||++ ||.|++|||+++.+ ++++...+.... .|++++|+|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVK-----------GDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCT-----------TCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 4899999999999999 9999 99999999999997 678888886542 489999999994
No 290
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.51 E-value=1.2e-07 Score=75.45 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=48.8
Q ss_pred CCcEEEEecccCcccccC--ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCC--CCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAG--LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKV--GDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG--l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~--g~~v~l~v~R~ 379 (397)
.+++|..|.++|||+++| |++ ||+|++|||+++.++ .++...+..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 468999999999999999 999 999999999999965 566666665322 35899999885
No 291
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.51 E-value=1.1e-07 Score=77.00 Aligned_cols=59 Identities=29% Similarity=0.477 Sum_probs=51.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.+ +.++...+.. .|+++.|+|.|..+
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKT-----------GDKILEVSGVDLQNASHSEAVEAIKN--AGNPVVFIVQSLSS 111 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHT--SCSSEEEEECCBSC
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 689999999999999999 999 99999999999976 5677776654 57889999988654
No 292
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.51 E-value=2.1e-07 Score=71.03 Aligned_cols=56 Identities=29% Similarity=0.354 Sum_probs=47.8
Q ss_pred CCcEEEEecccCcccc-cCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGK-AGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILR 378 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~-aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R 378 (397)
.+++|..+.++|||++ +||++ ||+|++|||+++. ++.++...+.. +++++.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEE
Confidence 4689999999999999 79999 9999999999995 55788887764 56788888764
No 293
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.50 E-value=5.6e-08 Score=76.94 Aligned_cols=57 Identities=30% Similarity=0.367 Sum_probs=49.6
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|..|.++|||++ ||++ ||+|++|||+++.+ +.++...+. .+|+++.|+|.|+.
T Consensus 43 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp CSEECCCBSSSSTTSS-SCCT-----------TCEEEEETTEECSSCCHHHHHHHHH--HCCSEEEEEEECCC
T ss_pred CCEEEEEECCCCchHH-CCCC-----------CCEEEEECCEECCCCCHHHHHHHhh--cCCCeEEEEEEecC
Confidence 6899999999999999 9999 99999999999987 556666665 36899999999964
No 294
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.50 E-value=9.8e-08 Score=77.12 Aligned_cols=56 Identities=23% Similarity=0.258 Sum_probs=49.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|..|.++|||+++||++ ||+|++|||++|.+ +.++..++.. ..+.|+|.|..
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~----~~v~l~v~R~p 101 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ----PSLGLLVRTYP 101 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCT-----------TCCEEEESSCBGGGCCHHHHHHHHTS----SEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhC----CcEEEEEEECC
Confidence 578999999999999999999 99999999999998 5688888753 47999999864
No 295
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=7.2e-08 Score=76.65 Aligned_cols=60 Identities=22% Similarity=0.327 Sum_probs=51.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ +.++...+.. .++++.++|.|++..
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLA-----------DDHLIEVNGENVEDASHEEVVEKVKK--SGSRVMFLLVDKETD 93 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHHH--HCSEEEEEECCTTTS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCchh
Confidence 688999999999999999999 99999999999985 5677766654 478899999997653
No 296
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.48 E-value=1.4e-07 Score=78.03 Aligned_cols=60 Identities=17% Similarity=0.182 Sum_probs=52.9
Q ss_pred CCcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.+++|..|.+++||+++ ||++ ||+|++|||+++.+ ++++..++.. .++..+.++|.|++.
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQP-----------GDEILQLGGTAMQGLTRFEAWNIIKA-LPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCT-----------TCCEEECSSCBGGGSCHHHHHHHHHT-SCSSEEEEEEEEESS
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCceEEEEEEeCCC
Confidence 47899999999999999 9999 99999999999987 6888888876 457789999999754
No 297
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.48 E-value=3.3e-07 Score=73.65 Aligned_cols=63 Identities=30% Similarity=0.433 Sum_probs=51.4
Q ss_pred CcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 015960 311 GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQLEEIL 386 (397)
Q Consensus 311 g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~ 386 (397)
|..|..+.+ ++..+||++ ||+|++|||++|.+ +.|+.++|...++|+++.|+|.|++....+.
T Consensus 35 g~~V~~I~~--~~~~aGL~~-----------GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~~~p~~ 99 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQK-----------GDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGPPSPTK 99 (113)
T ss_dssp EEEEEEESC--GGGSTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSCC----
T ss_pred CcEEEEecC--hHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCccCccc
Confidence 445777776 588999999 99999999999995 5799999988778999999999998755444
No 298
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.48 E-value=2.5e-07 Score=75.83 Aligned_cols=56 Identities=23% Similarity=0.404 Sum_probs=50.3
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILR 378 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R 378 (397)
.+++|..+.++|||+++| |++ ||+|++|||+++. ++.++...+.. .++++.++|.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEE
Confidence 578999999999999999 999 9999999999998 68888888876 35569999988
No 299
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.46 E-value=1.5e-07 Score=83.32 Aligned_cols=58 Identities=28% Similarity=0.347 Sum_probs=54.4
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|.+|.++|||+++| |++ ||+|++|||+++.+ +.++.+++... ++.+.|+|.|++
T Consensus 135 ~gv~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~R~~ 195 (196)
T 1p1d_A 135 DPLVISDIKKGSVAHRTGTLEL-----------GDKLLAIDNIRLDSCSMEDAVQILQQC--EDLVKLKIRKDE 195 (196)
T ss_dssp CCCEEEECCSSSHHHHTSCCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHHC--TTCEEEEEECCC
T ss_pred CCEEEEEECCCCcHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCEEEEEEEeCC
Confidence 689999999999999999 999 99999999999999 99999999874 889999999986
No 300
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.46 E-value=1.6e-07 Score=92.07 Aligned_cols=61 Identities=30% Similarity=0.379 Sum_probs=56.4
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ ++++...+....+|++++|+|.|+++
T Consensus 31 ~gi~V~~V~~gspA~~aGL~~-----------GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 93 (391)
T ss_dssp TEEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCc
Confidence 689999999999999999999 99999999999976 89999999876789999999999763
No 301
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.45 E-value=2.5e-07 Score=80.18 Aligned_cols=57 Identities=21% Similarity=0.295 Sum_probs=51.2
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEec--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDV--SNANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v--~~~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++ .++.++..++.. .|++|.|+|.|+
T Consensus 111 ~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~VNG~~v~~~~~~~~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 111 LGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp BEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTBCHHHHHHHHHH--CCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEeC
Confidence 579999999999999999 999 999999999999 466788888876 578999999985
No 302
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.44 E-value=1.4e-07 Score=74.71 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=48.6
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRI 376 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v 376 (397)
.+++|..|.+++||+++||++ ||+|++|||+++. ++.++.+++... ++ ++.|+|
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~-~~-~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQA-----------GDVLANINGVSTEGFTYKQVVDLIRSS-GN-LLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCHHHHHHHHHHT-TT-EEEEEC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhC-CC-cEEEEE
Confidence 588999999999999999999 9999999999999 889999999875 44 777765
No 303
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=5.8e-08 Score=78.97 Aligned_cols=64 Identities=14% Similarity=0.235 Sum_probs=52.0
Q ss_pred CCcEEEEecccCccccc--CccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCC--CCEEEEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKA--GLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKV--GDEVIVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a--Gl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~--g~~v~l~v~R~g~~~ 383 (397)
.|++|..|.++|||+++ ||++ ||+|++|||+++.+ +.++..++..... +.++.|+|.|+....
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 109 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAVYD 109 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCT-----------TCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccccC
Confidence 46899999999999999 9999 99999999999986 5677777764311 357999999986543
Q ss_pred E
Q 015960 384 E 384 (397)
Q Consensus 384 ~ 384 (397)
.
T Consensus 110 ~ 110 (119)
T 2cs5_A 110 V 110 (119)
T ss_dssp C
T ss_pred c
Confidence 3
No 304
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.43 E-value=3.9e-07 Score=72.06 Aligned_cols=60 Identities=27% Similarity=0.299 Sum_probs=50.4
Q ss_pred CCcEEEEecccCccccc-CccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKA-GLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~a-Gl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.+++|..|.++|||+++ ||++ ||+|++|||+++.+ +.++..++.. .+++++|++.|....
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVVYVALE 97 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCS-----------SEEEEEETTEESTTSCHHHHHHHHHH--CCSEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEEEEecCCc
Confidence 47899999999999995 9999 99999999999965 7888888875 356899999996543
No 305
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.42 E-value=1.2e-07 Score=76.85 Aligned_cols=59 Identities=22% Similarity=0.262 Sum_probs=50.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.|++|..|.+++||+ +||++ ||+|++|||+++.++ .++...+.. .++++.|+|.|.++.
T Consensus 46 ~gv~V~~V~~~spA~-~gL~~-----------GD~I~~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLLQE-----------NDRVVMVNGTPMEDVLHSFAVQQLRK--SGKIAAIVVKRPRKV 106 (117)
T ss_dssp CBCEEEEECTTSSHH-HHBCT-----------TCEEEEESSCBCBTCCHHHHHHHHHH--SCSEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCccc-ccCCC-----------CCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEEEEECCcc
Confidence 689999999999997 99999 999999999999874 566666665 589999999996553
No 306
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.41 E-value=4.8e-07 Score=68.44 Aligned_cols=53 Identities=26% Similarity=0.428 Sum_probs=46.2
Q ss_pred EEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEE
Q 015960 313 VIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILR 378 (397)
Q Consensus 313 ~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R 378 (397)
.|..+.+++||+++||+. ||+|++|||+.+.. .+++.++|+ ..|++|+|+|..
T Consensus 26 ~I~~v~~gspA~~aGl~~-----------GD~Il~VNG~~v~~~~~~evv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGLKDSQIADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EEEEECTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHh--cCCCEEEEEEEe
Confidence 478999999999999999 99999999999964 567777776 478899999875
No 307
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=7.6e-08 Score=77.37 Aligned_cols=59 Identities=31% Similarity=0.468 Sum_probs=50.9
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.+++||+++| |++ ||+|++|||+++.++ .++...+. ..++++.|+|.|+++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~~~--~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRR-----------GDRILSVNGVNLRNATHEQAAAALK--RAGQSVTIVAQYRPE 100 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHH--SCCSEEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--hCCCcEEEEEEECcc
Confidence 578999999999999999 999 999999999999987 56666555 368899999998764
No 308
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.39 E-value=3e-07 Score=91.80 Aligned_cols=61 Identities=30% Similarity=0.379 Sum_probs=56.9
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.++|||+++||++ ||+|++|||+++.+ ..++..+|....+|++++|+|.|+++
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 689999999999999999999 99999999999987 89999999887789999999999764
No 309
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=2.7e-07 Score=73.10 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=51.8
Q ss_pred CcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcC---CCCCEEEEEEEECCe
Q 015960 311 GGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQC---KVGDEVIVRILRGTQ 381 (397)
Q Consensus 311 g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~---~~g~~v~l~v~R~g~ 381 (397)
+++|..+.+++||+++| |++ ||.|++|||+++.+ ++++..+|... ..++.+++.|.|.++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKV-----------GHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCT-----------TCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEccc
Confidence 35899999999999999 999 99999999999976 88888888642 357899999998754
No 310
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.29 E-value=3.8e-07 Score=89.71 Aligned_cols=58 Identities=21% Similarity=0.331 Sum_probs=50.6
Q ss_pred CcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeE
Q 015960 311 GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQL 382 (397)
Q Consensus 311 g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~ 382 (397)
.++|..|.++|||++|||++ ||+|++|||++|.+++ +..++.. +|++++|++.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~-----------GD~I~~InG~~v~~~~-~~~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQR-----------GHWIMMMNGDYITKKV-ESELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCT-----------TCEEEEETTBCBCTTT-GGGGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEEccchh-HHHHhhC--CCCEEEEEEEeCCcc
Confidence 37899999999999999999 9999999999999985 6666654 899999999998764
No 311
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.27 E-value=1.2e-07 Score=85.28 Aligned_cols=61 Identities=30% Similarity=0.371 Sum_probs=55.5
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEE-EEEEEECCeEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEV-IVRILRGTQLE 383 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v-~l~v~R~g~~~ 383 (397)
.|++|..|.+++||+++||+. ||+|++|||++|. ++.++..++... |+.+ .++|.|+|+..
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~-----------GD~Il~VNG~~V~~~s~~dl~~~l~~~--g~~v~~l~V~R~g~~~ 96 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG--GDETKLLVVDRETDEF 96 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCTHHHHHHHHHH--CSEEEEEECCHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhc--CCeEEEEEEEECCEEE
Confidence 478999999999999999999 9999999999999 999999988764 7888 99999988765
No 312
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.26 E-value=1.2e-06 Score=78.07 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=50.7
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
.|++|.+|.++|||+++| |++ ||+|++|||++|.++ .++..++.. .++.+.|+|.|..
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFKG--ANGKVSMEVTRPK 196 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEEC
T ss_pred ceEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCC
Confidence 689999999999999999 999 999999999999965 777777754 4678999999943
No 313
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.21 E-value=4.1e-07 Score=89.23 Aligned_cols=67 Identities=24% Similarity=0.400 Sum_probs=57.0
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQLEEIL 386 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~ 386 (397)
.|++|..|.++|||+++| |++ ||+|++|||+++.++ .++..++....+++++.|+|.|++...++.
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~ 300 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSI-----------GDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVL 300 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCT-----------TCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC---
T ss_pred CCEEEEeeCCCCHHHHcCCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceee
Confidence 468999999999999999 999 999999999999988 788888877667888999999998776665
Q ss_pred E
Q 015960 387 I 387 (397)
Q Consensus 387 v 387 (397)
+
T Consensus 301 l 301 (388)
T 3suz_A 301 I 301 (388)
T ss_dssp -
T ss_pred E
Confidence 5
No 314
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.18 E-value=2.1e-07 Score=93.07 Aligned_cols=65 Identities=31% Similarity=0.473 Sum_probs=0.0
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECCeEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILI 387 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g~~~~~~v 387 (397)
.|++|.+|.++|||+++||++ ||+|++|||+++.++.++.+++.. .++ .+.|+|.|+|+.+++.+
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~-----------GDiI~~vng~~v~~~~~l~~~l~~-~~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKK-----------GDVIIGANQQAVKNIAELRKVLDS-KPS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHc-CCC-eEEEEEEECCEEEEEEe
Confidence 578999999999999999999 999999999999999999999876 344 89999999998876654
No 315
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.47 E-value=2.3e-07 Score=74.67 Aligned_cols=55 Identities=29% Similarity=0.372 Sum_probs=45.4
Q ss_pred CCcEEEEecccCcccc-cCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGK-AGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRIL 377 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~-aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~ 377 (397)
.|++|..|.++|||++ +||++ ||+|++|||+++. ++.++..++.. .+++++|+|+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVV 110 (112)
Confidence 4789999999999999 99999 9999999999994 57777777653 4555777664
No 316
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.05 E-value=2.3e-06 Score=79.08 Aligned_cols=59 Identities=27% Similarity=0.326 Sum_probs=51.7
Q ss_pred CCcEEEEecccCcccc-cCccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEECCe
Q 015960 310 SGGVIFIAVEEGPAGK-AGLRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRGTQ 381 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~-aGl~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~g~ 381 (397)
.|++|..|.+++||++ +||+. ||+|++|||+++.+ ..++..++.. .|++|.|+|.|.++
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~v~~l~~--~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKK--TGKEVVLEVKYMKE 164 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCS-----------SCEEEEESSCBCTTSCHHHHHHHHHH--CCSCCCEEEECCSS
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEEEEeCcc
Confidence 4789999999999999 79999 99999999999998 4777777766 37789999999765
No 317
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.01 E-value=1.9e-05 Score=61.06 Aligned_cols=59 Identities=19% Similarity=0.286 Sum_probs=51.5
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSN--ANDLHNILDQCKVGDEVIVRILRG 379 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~--~~d~~~~l~~~~~g~~v~l~v~R~ 379 (397)
...+|..+.++++|++.| |++ ||.|++|||+.+.. ..++.++|++.+.|.+++|++.+-
T Consensus 28 g~~~I~rI~~gg~a~r~g~L~v-----------GD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKTICV-----------GDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp SCCEEEEECTTSHHHHCTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred CcEEEEEEcCCChHHhcCCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECc
Confidence 447899999999999886 566 99999999999975 578999999988899999998764
No 318
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.90 E-value=0.0013 Score=56.94 Aligned_cols=162 Identities=14% Similarity=0.169 Sum_probs=96.2
Q ss_pred HHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEE-E-Ec---CCC
Q 015960 87 FEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVV-G-HD---QGT 161 (397)
Q Consensus 87 ~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv-~-~d---~~~ 161 (397)
..-++..++.|+.. .+.=||.-|-++ ..|-+.|.-. .+.+. -||+.++..-. . .+ ...
T Consensus 12 ~~l~~~N~~~vtt~------------~g~ft~LgI~dr-~~vvP~Ha~~-~~~i~---i~g~~~~v~d~~~L~~~~g~~~ 74 (187)
T 3qzr_A 12 LSLLRRNVRQVQTD------------QGHFTMLGVRDR-LAVLPRHSQP-GKTIW---IEHKLVNVLDAVELVDEQGVNL 74 (187)
T ss_dssp HHHHHHHEEEEEET------------TEEEEEEEEEBT-EEEEEGGGCC-CSEEE---ETTEEEEEEEEEECCCTTCCCC
T ss_pred HHHHHcCeEEEEEC------------CCeEEEEEEeee-EEEEeCCCCC-CCEEE---ECCEEEEeeeeEEEECCCCCEE
Confidence 33445566788752 223488888655 8999999943 23332 35666654211 1 12 246
Q ss_pred CeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCC-CCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCc
Q 015960 162 DLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGR-KFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNS 240 (397)
Q Consensus 162 DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~-~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 240 (397)
||++++++... +++-+.--..++......+..+-+.... ...+..|.+...... ...+......+.++++..+|.-
T Consensus 75 Elt~v~l~~~~-kfRDIrkfi~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i--nlsg~~t~r~l~Y~~pTk~G~C 151 (187)
T 3qzr_A 75 ALTLITLDTNE-KFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL--NLSGKPTHRTMMYNFPTKAGQC 151 (187)
T ss_dssp SEEEEEECSSC-CBCCCGGGSCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE--EETTEEEEEEEEESSCCCTTCT
T ss_pred EEEEEEcCCCc-cccchHHhCccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE--eCCCCccccEEEECCCCCCCcc
Confidence 99999998753 4443332222333322234444343333 223344666554322 1223344678999999999999
Q ss_pred ccceecCCccEEEEEeeeeccCCCccCceeeEecc
Q 015960 241 GGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPID 275 (397)
Q Consensus 241 GGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~ 275 (397)
||+|+. .|+++||+.++ ....||+.++.
T Consensus 152 Ggvl~~-~gkIiGIHvaG------nG~~G~~a~L~ 179 (187)
T 3qzr_A 152 GGVVTS-VGKIIGIHIGG------NGRQGFCAGLK 179 (187)
T ss_dssp TCEEEE-TTEEEEEEEEE------CSSCEEEEECC
T ss_pred CCeEEe-cCcEEEEEECC------CCCcEEEEEee
Confidence 999995 89999999987 23368887763
No 319
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.87 E-value=1.5e-05 Score=84.42 Aligned_cols=68 Identities=26% Similarity=0.280 Sum_probs=55.4
Q ss_pred CCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeE--EE
Q 015960 310 SGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQL--EE 384 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~--~~ 384 (397)
.|++|..|.+++||+++| |+. ||+|++|||+++.++ .++..++. .+|++|.|+|.|++.. ..
T Consensus 89 ~g~~V~~v~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~--~~g~~v~l~v~R~~~~~~~~ 155 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALK--EAGSIVRLYVMRRKPPAEKV 155 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHhh--ccccccceEEEecccccccc
Confidence 689999999999999999 999 999999999999987 45555554 3688999999998753 23
Q ss_pred EEEEee
Q 015960 385 ILIILE 390 (397)
Q Consensus 385 ~~v~l~ 390 (397)
+++++.
T Consensus 156 ~~v~l~ 161 (721)
T 2xkx_A 156 MEIKLI 161 (721)
T ss_pred eeeeee
Confidence 444443
No 320
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.85 E-value=0.00068 Score=60.45 Aligned_cols=177 Identities=12% Similarity=0.052 Sum_probs=98.3
Q ss_pred HHHHHHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCC---CeE--EEEecCCcEEEEE-----
Q 015960 84 AGIFEENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGA---SSV--KVTLFDKTTLDAK----- 153 (397)
Q Consensus 84 ~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~---~~i--~V~~~~g~~~~a~----- 153 (397)
.++...+.+-.|+|.....+. ......+|..|-.+ +.|...|..... ..+ .+. .+|+.|+..
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~~------~~~~~~t~LgI~~r-~~lvP~H~~~~~~~~~~~~~~i~-i~g~~~~~~~~~v~ 74 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKNG------SVRWVMNALGVKDD-WLLVPSHAYKFEKDYEMMEFYFN-RGGTYYSISAGNVV 74 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETTS------CCEEEEEEEEEEBT-EEEEEGGGTTTSTTGGGEEEEEE-ETTEEEEEEGGGSE
T ss_pred eeehhhhhccEEEEEEeCCCC------CcceEEEEEEEcCC-EEEEecccCcccccccccceEEE-ECCEEEeeccccce
Confidence 456667777788887653211 11236799999866 999999997522 122 233 366666543
Q ss_pred EEEEc-CCCCeEEEEEcCCCCCcceeec--CCC-CCCCCCC-eEEEEecCCCCCCceeeeEE---eeccccccCCCCCCc
Q 015960 154 VVGHD-QGTDLAVLHIDAPNHKLRSIPV--GVS-ANLRIGQ-KVYAIGHPLGRKFTCTAGII---SAFGLEPITATGPPI 225 (397)
Q Consensus 154 vv~~d-~~~DlAlL~v~~~~~~~~~~~l--~~s-~~~~~G~-~V~~iG~p~g~~~~~~~G~v---s~~~~~~~~~~~~~~ 225 (397)
+...| ...||++++++.. ..++.+.- .+. +-...++ .+.+++...+....+..+.+ ...........+...
T Consensus 75 ~~~~d~~~~Dl~lv~Lp~~-~~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~ 153 (212)
T 2hal_A 75 IQSLDVGFQDVVLMKVPTI-PKFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYVHKKNDGTTV 153 (212)
T ss_dssp EECSSSSCCSEEEEECTTS-CCBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEEEEECTTSCEE
T ss_pred eEeccCCCceEEEEECCCC-CccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeEEEecCCCccc
Confidence 33333 4689999999763 23332221 111 1123333 33333221111111111100 000000011223222
Q ss_pred c----cEEEEccccCCCCcccceecC----CccEEEEEeeeeccCCCccCceeeEecc
Q 015960 226 Q----GLIQIDAAINRGNSGGPLLDS----SGSLIGVNTSIITRTDAFCGMACSIPID 275 (397)
Q Consensus 226 ~----~~i~~~~~i~~G~SGGPlvn~----~G~vVGI~s~~~~~~~~~~~~~~aip~~ 275 (397)
. ..+.++++..+|+-||||+.. .|+++||+.++. .+.|||.|+.
T Consensus 154 ~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~------g~~G~a~~lt 205 (212)
T 2hal_A 154 DLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG------NSILVAKLVT 205 (212)
T ss_dssp EEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE------TTEEEEEECC
T ss_pred ccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC------CCcEEEEeec
Confidence 3 678899999999999999974 799999999883 2368888763
No 321
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.83 E-value=1.5e-06 Score=74.75 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=31.9
Q ss_pred EEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCH
Q 015960 313 VIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNA 356 (397)
Q Consensus 313 ~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~ 356 (397)
+|..+.++|||+++||++ ||+|++|||+++.++
T Consensus 110 ~v~~v~~~s~a~~aGl~~-----------GD~I~~ing~~v~~~ 142 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGL 142 (166)
T ss_dssp EEEEECTTSHHHHTTCCS-----------SEEEEEETTEECTTC
T ss_pred EEEEEccCCHHHHcCCCC-----------CCEEEEECCEECCCC
Confidence 899999999999999999 999999999999987
No 322
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.76 E-value=0.00099 Score=58.14 Aligned_cols=145 Identities=14% Similarity=0.219 Sum_probs=84.3
Q ss_pred eeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEE--EEEEcC---CCCeEEEEEcCCCCCcceeecCCC-CCCCC
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAK--VVGHDQ---GTDLAVLHIDAPNHKLRSIPVGVS-ANLRI 188 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~--vv~~d~---~~DlAlL~v~~~~~~~~~~~l~~s-~~~~~ 188 (397)
.-||..|-++ ++|.+.|...+ +.+.| +|+.++.. ..-.+. ..||++++++... .++-+.--.. .....
T Consensus 24 ~ft~LgI~dr-~~lvP~Ha~~~-~ti~i---~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~~-kFRDIr~~~~~~~~~~ 97 (190)
T 3zve_A 24 EFTMLGVHDR-VAVIPTHASVG-ETIYI---NDVETKVLDACALRDLTDTNLEITIVKLDRNQ-KFRDIRHFLPRYEDDY 97 (190)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCC-SEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEECCSS-CBCCCGGGSCSSCCCE
T ss_pred EEEEEEEeCC-EEEEecCCCCC-cEEEE---CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCCc-ccCchHHhccccCCCC
Confidence 4578878766 99999997643 33322 34433321 111232 4599999998752 3433321111 11233
Q ss_pred CCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCc
Q 015960 189 GQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGM 268 (397)
Q Consensus 189 G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~ 268 (397)
.+.++++=.+......+..|.+...... ...+......+.++++..+|+-||||+ .+|+++||+.++- ...
T Consensus 98 ~~~~l~i~s~~~~~~~~~v~~v~~~~~i--~l~g~~~~~~~~Y~~pT~~G~CG~~li-~~gkI~GiHvaG~------G~~ 168 (190)
T 3zve_A 98 NDAVLSVHTSKFPNMYIPVGQVTNYGFL--NLGGTPTHRILMYNFPTRAGQCGGVVT-TTGKVIGIHVGGN------GAQ 168 (190)
T ss_dssp EEEEEEECSSSCSSEEEEEEEEEEEEEE--EETTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC------SSC
T ss_pred CCeEEEEECCCCcceEEecccceEecee--ecCCCeeeeeEEEecCCCCCccCCeEE-ECCCEEEEEECcC------CCc
Confidence 3445544333222223344555443322 122334467889999999999999999 5789999999882 236
Q ss_pred eeeEec
Q 015960 269 ACSIPI 274 (397)
Q Consensus 269 ~~aip~ 274 (397)
|||.++
T Consensus 169 g~~~~l 174 (190)
T 3zve_A 169 GFAAML 174 (190)
T ss_dssp EEEEEC
T ss_pred eEehhh
Confidence 888766
No 323
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.75 E-value=2.3e-05 Score=82.93 Aligned_cols=63 Identities=25% Similarity=0.274 Sum_probs=54.2
Q ss_pred CCCcEEEEecccCcccccC-ccccccCCCCcccCCcEEEEECCEecCCH--HHHHHHHhcCCCCCEEEEEEEECCeEEE
Q 015960 309 ISGGVIFIAVEEGPAGKAG-LRSTKFGANGKFILGDIIKAVNGEDVSNA--NDLHNILDQCKVGDEVIVRILRGTQLEE 384 (397)
Q Consensus 309 ~~g~~V~~v~~~spa~~aG-l~~~~~~~~~~l~~GDiI~~vng~~v~~~--~d~~~~l~~~~~g~~v~l~v~R~g~~~~ 384 (397)
..|++|..|.++|||+++| |++ ||+|++|||++|.++ .++...+.. .|+.+.|+|.|+++...
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~V~R~g~~~~ 248 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQI-----------GDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAYL 248 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCC-----------CCEEEEECCeeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCcccc
Confidence 3689999999999999999 999 999999999999986 566666654 57899999999987643
No 324
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.75 E-value=0.0023 Score=55.38 Aligned_cols=160 Identities=13% Similarity=0.144 Sum_probs=94.1
Q ss_pred HHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEE--EEEEcC---CCC
Q 015960 88 EENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAK--VVGHDQ---GTD 162 (397)
Q Consensus 88 ~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~--vv~~d~---~~D 162 (397)
.-.+..++.|++. .+.-||.-|-++ ..|-+.|.-. .+.+ . -||+.++.. ..-.|. ..|
T Consensus 11 sl~k~N~~~vtT~------------~G~ft~LgI~dr-~~vvPtHa~~-~~~i--~-i~G~~~~v~d~~~L~~~~g~~lE 73 (191)
T 3q3y_A 11 AMMKRNASTVKTE------------YGEFTMLGIYDR-WAVLPRHAKP-GPTI--L-MNDQEVGVLDAKELVDKDGTNLE 73 (191)
T ss_dssp HHHHHHEEEEEET------------TEEEEEEEEEBT-EEEEEGGGCC-CSEE--E-ETTEEEEEEEEEEEECTTCCEEE
T ss_pred HHHHcCeEEEEEC------------CCcEEEEEEece-EEEEECCCCC-CCEE--E-ECCEEEEeeeEEEEEcCCCCEEE
Confidence 3444566777652 223488888655 8899999833 3332 2 367766641 111232 359
Q ss_pred eEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCC-CceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcc
Q 015960 163 LAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRK-FTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSG 241 (397)
Q Consensus 163 lAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~-~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 241 (397)
|++|+++... +++-+.--..+..........+-+-.... ..+..|.+...... ...+......+.++++...|.-|
T Consensus 74 lt~v~l~~~~-kFRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i--nlsg~~t~r~l~Y~~pTk~G~CG 150 (191)
T 3q3y_A 74 LTLLKLNRNE-KFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL--NLGGTPTKRMLVYNFPTRAGQCG 150 (191)
T ss_dssp EEEEEEECSS-CBCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE--EETTEEEEEEEEEESCCCTTCTT
T ss_pred EEEEECCCCc-cccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcceE--eCCCCcccCEEEecCCCCCCccC
Confidence 9999998753 44433322223333322233333332322 23445666554321 12233346789999999999999
Q ss_pred cceecCCccEEEEEeeeeccCCCccCceeeEec
Q 015960 242 GPLLDSSGSLIGVNTSIITRTDAFCGMACSIPI 274 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~ 274 (397)
|+|+. .|+++||++++- ...||+.++
T Consensus 151 gvL~~-~gkIiGIHvgGn------G~~Gfaa~L 176 (191)
T 3q3y_A 151 GVLMS-TGKVLGIHVGGN------GHQGFSAAL 176 (191)
T ss_dssp CEEEE-TTEEEEEEEEEE------TTEEEEEEC
T ss_pred CEEEe-CCCEEEEEECCC------CcceEEeeh
Confidence 99995 789999999872 336888766
No 325
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.70 E-value=0.00073 Score=58.47 Aligned_cols=143 Identities=22% Similarity=0.292 Sum_probs=84.3
Q ss_pred eEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEE----EEEEEEc-CCCCeEEEEEcCCCCCcceeecCCCCCCCCCC
Q 015960 116 GTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLD----AKVVGHD-QGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQ 190 (397)
Q Consensus 116 GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~----a~vv~~d-~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~ 190 (397)
-||.-|-++ +.|...|..... .+ .+ +|+.++ .+++..+ ...||++++++... +++-+.--..+....-+
T Consensus 25 ~t~LgI~d~-~~vvP~Ha~~~~-~i--~i-~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~-kfRDIrkfi~~~~~~~~ 98 (182)
T 2b0f_A 25 FTGLGIHDR-VCVIPTHAQPGD-DV--LV-NGQKIRVKDKYKLVDPENINLELTVLTLDRNE-KFRDIRGFISEDLEGVD 98 (182)
T ss_dssp EEEEEEEBT-EEEEESTTCCCS-EE--EE-TTEEEEEEEEEEEEETTTEEEEEEEEEECCSS-CBCCGGGTBCSSCCCSE
T ss_pred EEEEEEeee-EEEEecCCCCcc-EE--EE-CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcc-cccchHHhcCCCCCCCc
Confidence 488888766 999999997653 33 33 555432 2222212 25799999997753 33322211111111114
Q ss_pred eEEEEecCCCCCC-ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccCce
Q 015960 191 KVYAIGHPLGRKF-TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMA 269 (397)
Q Consensus 191 ~V~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~ 269 (397)
.++++ +-.+... .+..|.+....... ..+......+.++++..+|+-||||+ .+|+++||+.++- .+.|
T Consensus 99 ~~lv~-n~~~~p~~~~~vg~~~~~g~i~--l~G~~t~~~~~Y~~pTk~G~CGgvl~-~~gkIlGIHvaG~------G~~G 168 (182)
T 2b0f_A 99 ATLVV-HSNNFTNTILEVGPVTMAGLIN--LSSTPTNRMIRYDYATKTGQCGGVLC-ATGKIFGIHVGGN------GRQG 168 (182)
T ss_dssp EEEEE-ESSSCEEEEEEEEEEEEEEEEE--ETTEEEEEEEEEESCCCTTCTTCEEE-ETTEEEEEEEEEE------TTEE
T ss_pred eEEEE-EcCCCceEEEEecceEEeceEc--CCCcEecceEEeccCCCCcccCCeEE-eCCCEEEEEeCCC------CCce
Confidence 44444 2222222 23455554433211 22434467889999999999999999 4889999999982 3378
Q ss_pred eeEec
Q 015960 270 CSIPI 274 (397)
Q Consensus 270 ~aip~ 274 (397)
|+.++
T Consensus 169 faa~l 173 (182)
T 2b0f_A 169 FSAQL 173 (182)
T ss_dssp EEEEC
T ss_pred Eehhh
Confidence 88776
No 326
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=97.68 E-value=0.00029 Score=62.69 Aligned_cols=159 Identities=16% Similarity=0.201 Sum_probs=89.1
Q ss_pred eeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEE---EEEE----EEcCC---CCeEEEEEcCCCCCcceeecCCCC
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLD---AKVV----GHDQG---TDLAVLHIDAPNHKLRSIPVGVSA 184 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~---a~vv----~~d~~---~DlAlL~v~~~~~~~~~~~l~~s~ 184 (397)
.-+|..|-.+ +.|...|....... .+.+ +++.+. ..+. ..+.. .||++++++... .++-+.--..+
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~~~-~i~i-~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~-kfrdi~k~f~~ 106 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEKYD-KIML-DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGN-KVRDITKHFRD 106 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSCCS-EEEE-TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSC-CBCCCGGGBCS
T ss_pred EEEEeeEcCC-EEEEEcccCCCCCc-EEEE-cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCc-ccCchhhhccc
Confidence 3466667555 89999999865322 3333 344332 2222 23433 799999997642 33332221123
Q ss_pred CC--CCCCeEEEEecCCCCCCceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceec---CCccEEEEEeeee
Q 015960 185 NL--RIGQKVYAIGHPLGRKFTCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLD---SSGSLIGVNTSII 259 (397)
Q Consensus 185 ~~--~~G~~V~~iG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn---~~G~vVGI~s~~~ 259 (397)
++ ..++.+..+-++.......-.|.+...........+......+.++++..+|+-||+|+- ..|+++||+.++-
T Consensus 107 ~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHvaG~ 186 (209)
T 2bhg_A 107 TARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVSMDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAGG 186 (209)
T ss_dssp SCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC-----CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEEEEE
T ss_pred ccccCCCCeEEEEeccCccCceeeeeeEEEccceeeecCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEEccC
Confidence 33 345556666566433233334444333322212234445678999999999999999964 3789999999983
Q ss_pred ccCCCccCceeeEeccchhHHHHHHH
Q 015960 260 TRTDAFCGMACSIPIDTVSGIVDQLV 285 (397)
Q Consensus 260 ~~~~~~~~~~~aip~~~i~~~~~~l~ 285 (397)
.+.|||.++ .++.++.++
T Consensus 187 ------g~~G~aa~l--~r~~~~~~~ 204 (209)
T 2bhg_A 187 ------NGVGYCSCV--SRSMLQKMK 204 (209)
T ss_dssp ------TTEEEEEEC--CHHHHHHHH
T ss_pred ------CCceEEEEc--CHHHHHHHH
Confidence 235777664 333444443
No 327
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.66 E-value=0.004 Score=53.91 Aligned_cols=144 Identities=17% Similarity=0.194 Sum_probs=84.7
Q ss_pred eeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEE--EEEEcC---CCCeEEEEEcCCCCCcceeecCCCCCCC-C
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAK--VVGHDQ---GTDLAVLHIDAPNHKLRSIPVGVSANLR-I 188 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~--vv~~d~---~~DlAlL~v~~~~~~~~~~~l~~s~~~~-~ 188 (397)
.-|+.-|..+ +.|-..|...+. . +.+ +|+.++.. ..-+|+ ..||++++++... +++-+.---.+... .
T Consensus 24 ~~t~Lgi~~~-~~lvP~Ha~~~~-~--i~i-~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~-kfrDi~kfip~~~~~~ 97 (180)
T 1cqq_A 24 KFTGLGVYDR-FVVVPTHADPGK-E--IQV-DGITTKVIDSYDLYNKNGIKLEITVLKLDRNE-KFRDIRRYIPNNEDDY 97 (180)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCCS-E--EEE-TTEEEEEEEEEEEECTTSCEEEEEEEEECSSC-CBCCGGGGSCSSCCCE
T ss_pred cEEEEEEeeE-EEEEccCcCccc-E--EEE-CCEEEEeccceEEEcCCCCeEEEEEEEcCCcc-ccCccHhhcCCCcCCC
Confidence 3677778766 999999998864 2 322 45544433 223343 3699999998643 44333211111111 1
Q ss_pred CCeEEEEecCCCCCC-ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccC
Q 015960 189 GQKVYAIGHPLGRKF-TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCG 267 (397)
Q Consensus 189 G~~V~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~ 267 (397)
.+-.+++ +-..... .+..|.+....... ..+......+.++++..+|+-||+|+ .+|+++||+.++ + ..
T Consensus 98 ~~~~l~~-n~~~~~~~~v~~g~~~~~g~i~--~~g~~~~r~l~Y~~pT~~G~CGsvl~-~~gkIiGIHvAG-~-----G~ 167 (180)
T 1cqq_A 98 PNCNLAL-LANQPEPTIINVGDVVSYGNIL--LSGNQTARMLKYSYPTKSGYCGGVLY-KIGQVLGIHVGG-N-----GR 167 (180)
T ss_dssp EEEEEEE-CTTSSSCEEEEEEEEEECCCEE--ETTEEECSEEEECCCCCTTCTTCEEE-ETTEEEEEEEEE-C-----SS
T ss_pred CceEEEE-EcCCCceEEEEccceeeeeeEe--cCCcEeccEEEecCCCCCCcCCCeEE-ECCCEEEEEECC-C-----CC
Confidence 2222232 2222222 24555554433321 12444467899999999999999999 457999999988 1 23
Q ss_pred ceeeEec
Q 015960 268 MACSIPI 274 (397)
Q Consensus 268 ~~~aip~ 274 (397)
.|||.++
T Consensus 168 ~G~aa~l 174 (180)
T 1cqq_A 168 DGFSAML 174 (180)
T ss_dssp CEEEEEC
T ss_pred cEEEeee
Confidence 6888765
No 328
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.64 E-value=0.0018 Score=56.24 Aligned_cols=145 Identities=12% Similarity=0.180 Sum_probs=85.1
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEE--EEEcC---CCCeEEEEEcCCCCCcceeecCCCCCCCC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKV--VGHDQ---GTDLAVLHIDAPNHKLRSIPVGVSANLRI 188 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~v--v~~d~---~~DlAlL~v~~~~~~~~~~~l~~s~~~~~ 188 (397)
+.-||.-|-++ +.|-..|.-. .+++.| +|..++..- .-.+. ..||++++++... +++-+.--..+....
T Consensus 30 G~ft~LgI~d~-~~viP~Ha~p-~~~i~i---~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~-kFRDIr~fi~~~~~~ 103 (190)
T 4dcd_A 30 GEFTMLGVHDN-VAILPTHASP-GESIVI---DGKEVEILDAKALEDQAGTNLEITIITLKRNE-KFRDIRPHIPTQITE 103 (190)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEESSSC-CBCCCGGGSCSSCCC
T ss_pred eEEEEEEEECc-EEEEeCCCCC-CcEEEE---CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCc-cccchhHhccccCCC
Confidence 34588888765 9999999533 233333 465554321 11232 3599999999753 444443211122222
Q ss_pred CCeE-EEEecCCCCCC-ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCcc
Q 015960 189 GQKV-YAIGHPLGRKF-TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFC 266 (397)
Q Consensus 189 G~~V-~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~ 266 (397)
...+ .++-.+ .... .+..|.+....... ..+......+.++++..+|+-||||+ .+|+++||+.++- .
T Consensus 104 ~~~~~L~vn~~-~~~~~~~~vg~v~~~g~i~--lsg~~t~r~l~Y~~pT~~G~CGg~l~-~~gkIlGIHvaG~------G 173 (190)
T 4dcd_A 104 TNDGVLIVNTS-KYPNMYVPVGAVTEQGYLN--LGGRQTARTLMYNFPTRAGQCGGVIT-CTGKVIGMHVGGN------G 173 (190)
T ss_dssp EEEEEEEECSS-SSTTEEEEEEEEEEEEEEE--ETTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC------S
T ss_pred CCceEEEEecC-CCccEEEEeeeeEEecccc--CCCCcccceEEEccCCCCCccCCEEE-eCCCEEEEEECCC------C
Confidence 3333 333222 2222 23445554433321 23444567889999999999999999 5789999999882 2
Q ss_pred CceeeEec
Q 015960 267 GMACSIPI 274 (397)
Q Consensus 267 ~~~~aip~ 274 (397)
..||+.++
T Consensus 174 ~~G~aa~L 181 (190)
T 4dcd_A 174 SHGFAAAL 181 (190)
T ss_dssp SCEEEEEC
T ss_pred CceEeeeh
Confidence 36888765
No 329
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.62 E-value=8.4e-05 Score=81.66 Aligned_cols=68 Identities=21% Similarity=0.337 Sum_probs=56.3
Q ss_pred CCcEEEEeccc--------CcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEEEECC-
Q 015960 310 SGGVIFIAVEE--------GPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGT- 380 (397)
Q Consensus 310 ~g~~V~~v~~~--------spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v~R~g- 380 (397)
.+++|..+.++ |||+++|++ ++ ||+|++|||+++.++.++...+.. ++|++|+|+|.|++
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~---------l~-GD~I~~i~g~~~~~~~~~~~~~~~-~~g~~v~l~v~r~~~ 816 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGID---------PT-GYLIEDIDGETVGAGSNIYRVLSE-KAGTSARIRLSGKGG 816 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCC---------CT-TCEEEEETTEECBTTBCHHHHHHT-TTTSEEEEEEECSSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCC---------cC-CCEEEEECCEEccchhhHHHhhcC-CCCCEEEEEEECCCC
Confidence 35788899987 999999932 23 999999999999999899888877 68999999999987
Q ss_pred eEEEEEEE
Q 015960 381 QLEEILII 388 (397)
Q Consensus 381 ~~~~~~v~ 388 (397)
+.++++++
T Consensus 817 ~~~~~~~~ 824 (1045)
T 1k32_A 817 DKRDLMID 824 (1045)
T ss_dssp CEEEEEEE
T ss_pred ceEEEEEE
Confidence 44556555
No 330
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.25 E-value=0.00067 Score=68.79 Aligned_cols=55 Identities=11% Similarity=0.138 Sum_probs=49.2
Q ss_pred CCcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecCCHHHHHHHHhcCCCCCEEEEEE
Q 015960 310 SGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRI 376 (397)
Q Consensus 310 ~g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~~~~d~~~~l~~~~~g~~v~l~v 376 (397)
.|++|..|.+++++..+|++. ||+|++|||++|.+..||.+++.+. .++.+.+++
T Consensus 415 ~gVvvs~V~~~s~a~~~g~~~-----------gdiI~~vNg~~V~s~~~l~~~l~~~-k~~~l~~~~ 469 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYEDMN-----------NQQVLKFNGIPIRNIHHLAHLIDMC-KDKYLVFEF 469 (539)
T ss_dssp CCEEEEEECCCGGGTTCSSCC-----------SEEEEEETTEECCSHHHHHHHHHTC-CSSEEEEEE
T ss_pred eEEEEEEecCCchhhhcCCCC-----------CCEEEeECCEEcCCHHHHHHHHHHc-CCCeEEEEE
Confidence 589999999999999999999 9999999999999999999999875 456666654
No 331
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.00 E-value=0.0001 Score=72.05 Aligned_cols=57 Identities=23% Similarity=0.412 Sum_probs=0.0
Q ss_pred CcEEEEecccCcccccCccccccCCCCcccCCcEEEEECCEecC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 015960 311 GGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVS--NANDLHNILDQCKVGDEVIVRILRGT 380 (397)
Q Consensus 311 g~~V~~v~~~spa~~aGl~~~~~~~~~~l~~GDiI~~vng~~v~--~~~d~~~~l~~~~~g~~v~l~v~R~g 380 (397)
+.+|..|.++|||+++||++ ||+|++|||++|. ++.++..++.. .++.+.|+|.+..
T Consensus 316 ~g~I~~V~~gs~A~~aGL~~-----------GD~Il~VNg~~v~~~s~~~~~~~l~~--~~~~v~L~V~p~~ 374 (388)
T 3suz_A 316 NGIICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATAHEKIVQALSN--SVGEIHMKTMPAA 374 (388)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cCEEEEeecCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEecc
Confidence 44889999999999999999 9999999999997 46777777764 4677888887654
No 332
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.00 E-value=0.0016 Score=48.33 Aligned_cols=23 Identities=13% Similarity=0.202 Sum_probs=20.4
Q ss_pred ceeEEEEEcCCCEEEEcccccCCC
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGA 137 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~ 137 (397)
..|.|.+|+++ ||||+|||+.+.
T Consensus 24 ~~CgGslIs~~-~VLTAAHC~~~~ 46 (80)
T 2pka_A 24 FQCGGVLVNPK-WVLTAAHCKNDN 46 (80)
T ss_dssp EEEEEEEEETT-EEEECGGGCCSC
T ss_pred eEEEEEEEcCC-EEEECHHHCCCC
Confidence 47999999987 999999999764
No 333
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=96.70 E-value=0.091 Score=54.51 Aligned_cols=144 Identities=14% Similarity=0.197 Sum_probs=80.7
Q ss_pred eeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEE--EEEEcC---CCCeEEEEEcCCCCCcceeecCCCCCCCC-
Q 015960 115 TGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAK--VVGHDQ---GTDLAVLHIDAPNHKLRSIPVGVSANLRI- 188 (397)
Q Consensus 115 ~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~--vv~~d~---~~DlAlL~v~~~~~~~~~~~l~~s~~~~~- 188 (397)
.-+|..|..+ .+|+..|...+. .+.+ +|..+... ...+++ ..||++++++... .++.+.--.......
T Consensus 24 ~~~~l~i~~~-~~l~p~H~~~~~-~~~i---~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~-~frdi~~~~~~~~~~~ 97 (644)
T 2ijd_1 24 EFTMLGVHDN-VAILPTHASPGE-SIVI---DGKEVAILAAKALADQAGTNLEITIITLKRNE-KFRDIRPHIPTQITET 97 (644)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCCS-EEEE---TTEEEEEEECCEEECTTSCEEEEEEEEECSSC-CBCCCGGGSCSSCCCE
T ss_pred EEEEEEEece-EEEEccccCCCc-eEEE---CCEEEEeccceeEEcCCCCceeEEEEECCCCC-CcCChHHhccCCccCC
Confidence 3467777666 899999988643 3222 34333211 112344 4699999997542 333332111111111
Q ss_pred CCeEEEEecCCCCCC-ceeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCccEEEEEeeeeccCCCccC
Q 015960 189 GQKVYAIGHPLGRKF-TCTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCG 267 (397)
Q Consensus 189 G~~V~~iG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~ 267 (397)
.+-++++ .-.+... .+..|.+...+.. ...+......+.++++..+|+-|+||+. .|+||||+.++- ..
T Consensus 98 ~~~~l~~-~~~~~~~~~~~~~~~~~~g~~--~~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG~------g~ 167 (644)
T 2ijd_1 98 NDGVLIV-NTSKYPNMYVPVGAVTEQGYL--NLGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHVGGN------GS 167 (644)
T ss_dssp EEEEEEE-CSSSSTTEEEEEEEEEEEEEE--CCTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEEEEC------SS
T ss_pred CceEEEE-cCCCCceEEEEeeeeeeccce--ecCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEEcCC------CC
Confidence 2223332 1112222 2345555443221 1234445678899999999999999985 799999999882 12
Q ss_pred ceeeEec
Q 015960 268 MACSIPI 274 (397)
Q Consensus 268 ~~~aip~ 274 (397)
.|||.++
T Consensus 168 ~g~a~~l 174 (644)
T 2ijd_1 168 HGFAAAL 174 (644)
T ss_dssp CEEEEEC
T ss_pred ceEEEEc
Confidence 5677665
No 334
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=95.95 E-value=0.007 Score=46.63 Aligned_cols=52 Identities=21% Similarity=0.308 Sum_probs=35.4
Q ss_pred ccCCCCcccceecCC-c--cEEEEEeeeeccCCCccCceeeEeccchhHHHHHHHh
Q 015960 234 AINRGNSGGPLLDSS-G--SLIGVNTSIITRTDAFCGMACSIPIDTVSGIVDQLVK 286 (397)
Q Consensus 234 ~i~~G~SGGPlvn~~-G--~vVGI~s~~~~~~~~~~~~~~aip~~~i~~~~~~l~~ 286 (397)
..|.|||||||+-.. | .++||++++..... ....+...-+....+|+++.++
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~-~~~p~vyt~V~~y~~WI~~~~~ 95 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCS-TSTPGVYARVTALVNWVQQTLA 95 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTCC-TTSEEEEEEHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCC-CCCCeEEEEHHHhHHHHHHHHc
Confidence 468999999998432 2 69999999864322 2234555666777778777543
No 335
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=94.80 E-value=0.077 Score=57.06 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=50.1
Q ss_pred ceeEEEEEcCCCEEEEcccccCCCCeEEEEecCC-cEEEEEEEEEc--CCCCeEEEEEcCCCCCcceeecCCCC------
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDK-TTLDAKVVGHD--QGTDLAVLHIDAPNHKLRSIPVGVSA------ 184 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g-~~~~a~vv~~d--~~~DlAlL~v~~~~~~~~~~~l~~s~------ 184 (397)
..|.+.+|+++ ||+|.+|.... . .|.|.++ ..|+. +... +..|+++.|++..-....|+.+....
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-~--~v~fG~~~n~Y~i--V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~g~~~~~y 129 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-T--NVSFGDGENRYNI--VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQGAVAGAY 129 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-C--EECCTTSCCCEEE--EECCBCSSSSCBCCEESSCCCSSCCCCBCSSCSCTTGG
T ss_pred CCceEEEEcCc-EEEEeeecCCC-c--eEEeCCCcceEEE--EeeCCCCCCCeeeeecccccccccceeeccccCccccc
Confidence 45888899987 99999996543 2 4555543 35543 3322 34599999999864455555553321
Q ss_pred -CCCCCCeEEEEecC
Q 015960 185 -NLRIGQKVYAIGHP 198 (397)
Q Consensus 185 -~~~~G~~V~~iG~p 198 (397)
+.+.....+-+|..
T Consensus 130 ~d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 130 LDKERYPVFYRLGSG 144 (1048)
T ss_dssp GCTTTCCCEEEEECS
T ss_pred cccccCceEEEECCc
Confidence 13455666777755
No 336
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=92.97 E-value=0.3 Score=40.01 Aligned_cols=138 Identities=15% Similarity=0.204 Sum_probs=74.4
Q ss_pred ceeEEEEEcCCCEEEEcccccC-CCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC-CCCcceeecCCCCCCCCCCe
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIE-GASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP-NHKLRSIPVGVSANLRIGQK 191 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~-~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~-~~~~~~~~l~~s~~~~~G~~ 191 (397)
+.|-||.|+.. ..+|+-||+. ++.++. |. +...+.++..-+++.+++..+ ..+++-..|... ...|+.
T Consensus 15 gsgwgfwVS~~-~fiTaTHV~p~~~~eif-----G~--p~~~i~v~~~GEf~~~rfp~~~rpdvsgmiLEeg--~peGtV 84 (185)
T 4ash_A 15 GTGWGFWVSGH-VFITAKHVAPPKGTEIF-----GR--KPGDFTVTSSGDFLKYYFTSAVRPDIPAMVLENG--CQEGVV 84 (185)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCCTTCCBT-----TB--CTTSEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTCE
T ss_pred cCceEEEEccc-EEEEEEeecCCCchhhc-----CC--ccceEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCcE
Confidence 47899999987 9999999994 443321 11 111223455667888888765 235566666432 234776
Q ss_pred EEEE-ecCCCC--CCceeeeEEeeccccccCCCCCC-----cccEEEEccccCCCCcccceecCCc---cEEEEEeeeec
Q 015960 192 VYAI-GHPLGR--KFTCTAGIISAFGLEPITATGPP-----IQGLIQIDAAINRGNSGGPLLDSSG---SLIGVNTSIIT 260 (397)
Q Consensus 192 V~~i-G~p~g~--~~~~~~G~vs~~~~~~~~~~~~~-----~~~~i~~~~~i~~G~SGGPlvn~~G---~vVGI~s~~~~ 260 (397)
+.++ -.+.+. ...+..|.+....-......+.. -.+.--.|-...|||-|.|-+-..| -|+||+++...
T Consensus 85 ~svlikR~sgeliPlavRmgt~as~kIqGk~v~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHtAatr 164 (185)
T 4ash_A 85 ASVLVKRASGEMLALAVRMGSQAAIKIGSAVVHGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHVAATR 164 (185)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEEEETTEEEEEEEEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEEEECS
T ss_pred EEEEEecCCCCcceeEEEecceeeeEEeeeEecceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEeecc
Confidence 6543 333332 12333344332211100000000 0111223556789999999986544 48999998754
Q ss_pred c
Q 015960 261 R 261 (397)
Q Consensus 261 ~ 261 (397)
.
T Consensus 165 ~ 165 (185)
T 4ash_A 165 S 165 (185)
T ss_dssp S
T ss_pred C
Confidence 3
No 337
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=92.00 E-value=0.31 Score=40.71 Aligned_cols=133 Identities=20% Similarity=0.265 Sum_probs=66.7
Q ss_pred cCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEc
Q 015960 90 NLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHID 169 (397)
Q Consensus 90 ~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~ 169 (397)
..+.|.+|..... -.....|-|+.- +|..=|-.||-+++. +. .+++.+... .-|-..|++ ..-
T Consensus 3 l~dGvYRI~~~gl-------~g~~Q~GVGv~~--~GVFHTmWHVTrGa~---l~-~~g~~~~P~--wa~V~~Dli--sYG 65 (172)
T 2fp7_B 3 TTTGVYRIMTRGL-------LGSYQAGAGVMV--EGVFHTLWHTTKGAA---LM-SGEGRLDPY--WGSVKEDRL--CYG 65 (172)
T ss_dssp -CCEEEEEEC------------CCEEEEEEEE--TTEEEEEHHHHTTCC---EE-ETTEEECEE--EEETTTTEE--EES
T ss_pred CCCcEEEEEeccc-------cccceeeeEEee--CCEEEeeeeecCCce---EE-ECCcEecce--eehheecee--ecC
Confidence 4556677754321 112335666665 589999999998763 22 244433222 224455653 333
Q ss_pred CCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCc---eeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceec
Q 015960 170 APNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFT---CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLD 246 (397)
Q Consensus 170 ~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn 246 (397)
.+- +|. ..-.-++.|-++-.+.+.... .+.|+..-.. + +.--+.....+|.||+|++|
T Consensus 66 G~W------kL~--~kW~g~~eVql~a~~Pgk~~~n~qt~Pg~f~~~~-------G----eigaI~lD~p~GtSGSPIin 126 (172)
T 2fp7_B 66 GPW------KLQ--HKWNGHDEVQMIVVEPGKNVKNVQTKPGVFKTPE-------G----EIGAVTLDYPTGTSGSPIVD 126 (172)
T ss_dssp SSC------CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEETT-------E----EEEEECCCCCGGGTTCEEEC
T ss_pred Ccc------ccC--cccCCCceEEEEEECCCCceEEEEccCceEecCC-------C----eEEEEECCCCCCCCCCceEc
Confidence 321 111 122234555555444443321 2233332111 1 11222334568999999999
Q ss_pred CCccEEEEEeee
Q 015960 247 SSGSLIGVNTSI 258 (397)
Q Consensus 247 ~~G~vVGI~s~~ 258 (397)
.+|+|||+.--+
T Consensus 127 ~~G~vVGLYGNG 138 (172)
T 2fp7_B 127 KNGDVIGLYGNG 138 (172)
T ss_dssp TTSCEEEESCCE
T ss_pred cCCcEEEEecce
Confidence 999999995433
No 338
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=91.88 E-value=0.31 Score=41.05 Aligned_cols=134 Identities=20% Similarity=0.264 Sum_probs=71.7
Q ss_pred HcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEE
Q 015960 89 ENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHI 168 (397)
Q Consensus 89 ~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v 168 (397)
...+.|.+|..... -.....|-|+.- +|..=|-.||-+++. +. .+++.+... --|-..|++ ..
T Consensus 16 ~l~dGvYRI~~~gl-------~G~~Q~GVGv~~--~GVFHTmWHVTrGa~---L~-~~g~~l~P~--wasV~~Dli--sY 78 (185)
T 2ggv_B 16 DTTTGVYRIMTRGL-------LGSYQAGAGVMV--EGVFHTLWATTKGAA---LM-SGEGRLDPY--WGSVKEDRL--CY 78 (185)
T ss_dssp CCCSEEEEEEEECS-------SSEEEEEEEEEE--TTEEEECHHHHTTCC---EE-ETTEEECEE--EEETTTTEE--EE
T ss_pred cCCCcEEEEEeccc-------cccceeeeEEee--CCEEEeeeeecCcce---EE-ECCcEecce--eehhhccee--ec
Confidence 47788889876432 112235666655 589999999998763 22 244433322 224455653 33
Q ss_pred cCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCc---eeeeEEeeccccccCCCCCCcccEEEEccccCCCCccccee
Q 015960 169 DAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFT---CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLL 245 (397)
Q Consensus 169 ~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlv 245 (397)
-.+- +|. ..-.-++.|-++-.+.+.... .+.|+..-.. + +.--+.....+|.||+|++
T Consensus 79 GG~W------kL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~~-------G----eigAI~lD~p~GTSGSPIi 139 (185)
T 2ggv_B 79 GGPW------QLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTPE-------G----EIGAVTLDFPTGTSGSPIV 139 (185)
T ss_dssp SSSC------CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEETT-------E----EEEEECCCCCGGGTTCEEE
T ss_pred CCcc------cCc--cccCCCceEEEEEECCCCceEEEEccCceEecCC-------C----eEEEEECCCCCCCCCCceE
Confidence 3321 111 122334555555554443321 2233332111 1 1122233456899999999
Q ss_pred cCCccEEEEEeee
Q 015960 246 DSSGSLIGVNTSI 258 (397)
Q Consensus 246 n~~G~vVGI~s~~ 258 (397)
|.+|+|||+.--+
T Consensus 140 n~~G~vvGLYGNG 152 (185)
T 2ggv_B 140 DKNGDVIGLYGNG 152 (185)
T ss_dssp CTTSCEEEEEEEE
T ss_pred cCCCcEEEEecce
Confidence 9999999997554
No 339
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=91.69 E-value=0.42 Score=40.65 Aligned_cols=135 Identities=20% Similarity=0.271 Sum_probs=73.6
Q ss_pred HHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEE
Q 015960 88 EENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLH 167 (397)
Q Consensus 88 ~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~ 167 (397)
....+.|.+|..... -.....|-|+.- +|..=|-.||-+++. +. .+++.+... .-|-..|++ .
T Consensus 20 ~~l~dGVYRI~~~gl-------~G~~Q~GVGv~k--~GVFHTMWHVTrGa~---l~-~~g~~l~P~--WasV~~Dli--s 82 (198)
T 3e90_B 20 GDTTTGVYRIMTRGL-------LGSYQAGAGVMV--EGVFHTLWHTTKGAA---LM-SGEGRLDPY--WGSVKEDRL--C 82 (198)
T ss_dssp CCCCSEEEEEEEEET-------TEEEEEEEEEEE--TTEEEECHHHHTTCC---EE-ETTEEECEE--EEETTTTEE--E
T ss_pred ccCCCceEEEEeccc-------cccceeeeEEee--CCEEEeeeeecCcce---EE-ECCcEecce--eehheecee--e
Confidence 367788999976542 111225666554 689999999998763 22 244433222 224455653 3
Q ss_pred EcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCc---eeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccce
Q 015960 168 IDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFT---CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPL 244 (397)
Q Consensus 168 v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl 244 (397)
.-.+- +|. ..-.-.+.|-++-.+.+.... .+.|+..-.. + ..--+.....+|.||+|+
T Consensus 83 YGG~W------kL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~~-------g----~iGaV~lD~p~GTSGSPI 143 (198)
T 3e90_B 83 YGGPW------KLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTPE-------G----EIGAVTLDFPTGTSGSPI 143 (198)
T ss_dssp ESSSC------CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEETT-------E----EEEEECCCCCTTCTTCEE
T ss_pred cCCcc------cCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcCC-------C----eEEEEECCCCCCCCCCce
Confidence 33321 121 112223566666666554432 2344442211 1 112223334689999999
Q ss_pred ecCCccEEEEEeee
Q 015960 245 LDSSGSLIGVNTSI 258 (397)
Q Consensus 245 vn~~G~vVGI~s~~ 258 (397)
+|.+|+|||+.-.+
T Consensus 144 in~~G~VVGLYGNG 157 (198)
T 3e90_B 144 VDKNGDVIGLYGNG 157 (198)
T ss_dssp ECTTCCEEEECCCE
T ss_pred ecCCCcEEEEecce
Confidence 99999999995443
No 340
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=91.67 E-value=0.34 Score=40.96 Aligned_cols=133 Identities=22% Similarity=0.324 Sum_probs=70.0
Q ss_pred HHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEE
Q 015960 88 EENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLH 167 (397)
Q Consensus 88 ~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~ 167 (397)
......|.+|..... -.....|-|+.- +|..=|-.||-+++. +. .+++.+... --|-..|++ .
T Consensus 16 ~~l~dGvYRI~~~gl-------~G~~Q~GVGv~~--~GVFHTmWHVTrGa~---l~-~~g~~l~P~--wa~V~~Dli--s 78 (185)
T 2fom_B 16 AELEDGAYRIKQKGI-------LGYSQIGAGVYK--EGTFHTMWHVTRGAV---LM-HKGKRIEPS--WADVKKDLI--S 78 (185)
T ss_dssp --CCSEEEEEEEEET-------TEEEEEEEEEEE--TTEEEEEHHHHTTCC---EE-ETTEEECEE--EEETTTTEE--E
T ss_pred ccCCCcEEEEEeccc-------cccceeeeEEee--CCEEEeeeeecCcce---EE-ECCcEecce--eehheecee--e
Confidence 358889999876532 111235666655 589999999998763 22 244433322 224455653 3
Q ss_pred EcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCc---eeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccce
Q 015960 168 IDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFT---CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPL 244 (397)
Q Consensus 168 v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl 244 (397)
.-.+- ++ . ..-.-++.|-++-.+.+.... .+.|+..-. .+ +.--+.....+|.||+|+
T Consensus 79 YGG~W-kL-----~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~-------~G----eigaI~lD~p~GTSGSPI 139 (185)
T 2fom_B 79 YGGGW-KL-----E--GEWKEGEEVQVLALEPGKNPRAVQTKPGLFKTN-------TG----TIGAVSLDFSPGTSGSPI 139 (185)
T ss_dssp ESSSC-CC-----C--CCCCTTCCEEEEECCTTSCCEEEEECCEEEECS-------SC----EEEEECCCSCGGGTTCEE
T ss_pred cCCcc-cC-----c--cccCCCceEEEEEECCCCceEEEEcCCceeecC-------CC----eEEEEECCCCCCCCCCce
Confidence 33321 11 1 112234555555444443321 223333211 11 122223345689999999
Q ss_pred ecCCccEEEEEe
Q 015960 245 LDSSGSLIGVNT 256 (397)
Q Consensus 245 vn~~G~vVGI~s 256 (397)
+|.+|+|||+.-
T Consensus 140 in~~G~vvGLYG 151 (185)
T 2fom_B 140 VDKKGKVVGLYG 151 (185)
T ss_dssp ECTTSCEEEETT
T ss_pred EccCCcEEEEec
Confidence 999999999953
No 341
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=91.09 E-value=0.53 Score=39.86 Aligned_cols=136 Identities=24% Similarity=0.325 Sum_probs=73.3
Q ss_pred HHcCCceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEE
Q 015960 88 EENLPSVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLH 167 (397)
Q Consensus 88 ~~~~~sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~ 167 (397)
....+.|.+|..... ......|-|+.- +|..=|-.||-+++. +. .+++.+... .-|-..|++ .
T Consensus 25 ~~~~dGVYRI~~~gl-------~G~~Q~GVGv~k--~GVFHTMWHVTrGa~---l~-~~g~~l~P~--wasV~~Dli--s 87 (191)
T 3u1j_B 25 AELEEGVYRIKQQGI-------FGKTQVGVGVQK--EGVFHTMWHVTRGAV---LT-HNGKRLEPN--WASVKKDLI--S 87 (191)
T ss_dssp CCCCSEEEEEEEEET-------TEEEEEEEEEEE--TTEEEEEHHHHTTCC---EE-ETTEEECEE--EEETTTTEE--E
T ss_pred ccCCCceEEEEeccc-------cccceeeeEEee--CCEEEeeeeecCcce---EE-ECCcEecce--eecceecee--e
Confidence 367888999976532 111224566554 689999999998763 22 244433222 224455653 2
Q ss_pred EcCCCCCcceeecCCCCCCCCCCeEEEEecCCCCCCc---eeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccce
Q 015960 168 IDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLGRKFT---CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPL 244 (397)
Q Consensus 168 v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl 244 (397)
.-.+- +|. ..=.-.+.|-++-.+.+.... .+.|+..-. .+. ...+ .....+|.||+|+
T Consensus 88 YGG~W------kL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~-------~g~--iGaV--~lD~p~GTSGSPI 148 (191)
T 3u1j_B 88 YGGGW------RLS--AQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQTT-------TGE--IGAI--ALDFKPGTSGSPI 148 (191)
T ss_dssp ESSSC------CCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEECS-------SCE--EEEE--CCCCCTTCTTCEE
T ss_pred cCCcc------cCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC-------CCe--EEEE--ECCCCCCCCCCce
Confidence 33221 111 111123556666565554332 233444221 110 2223 3335689999999
Q ss_pred ecCCccEEEEEeeee
Q 015960 245 LDSSGSLIGVNTSII 259 (397)
Q Consensus 245 vn~~G~vVGI~s~~~ 259 (397)
+|.+|+|||+.-.++
T Consensus 149 in~~G~VVGLYGNG~ 163 (191)
T 3u1j_B 149 INREGKVVGLYGNGV 163 (191)
T ss_dssp ECTTSCEEEECCBEE
T ss_pred ecCCCcEEEEecCeE
Confidence 999999999964443
No 342
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=90.77 E-value=0.57 Score=41.02 Aligned_cols=130 Identities=19% Similarity=0.313 Sum_probs=69.1
Q ss_pred ceEEEEeeeccccccccCCCCceeEEEEEcCCCEEEEcccccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCC
Q 015960 93 SVVHITNFGMNTFTLTMEYPQATGTGFIWDEDGHIVTNHHVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN 172 (397)
Q Consensus 93 sVV~I~~~~~~~~~~~~~~~~~~GSG~ii~~~G~ILT~aHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~ 172 (397)
.|.+|..... -.....|-|+.- +|..=|-.||-+++. +. .+++.+... --|-..|++ ..-.+-
T Consensus 71 GvYRI~~~gl-------~G~~Q~GVGv~~--~GVFHTmWHVTrGa~---l~-~~g~~~~P~--wa~V~~Dli--sYGG~W 133 (236)
T 3lkw_A 71 GIYRILQRGL-------LGRSQVGVGVFQ--EGVFHTMWHVTRGAV---LM-YQGKRLEPS--WASVKKDLI--SYGGGW 133 (236)
T ss_dssp EEEEEEEEET-------TEEEEEEEEEEE--TTEEEECHHHHTTCC---EE-ETTEEECEE--EEETTTTEE--EESSSC
T ss_pred cEEEEEeccc-------cccceeeeEEee--CCEEEEeeeecCcce---EE-ECCcEecce--eehheecee--ecCCCc
Confidence 7888876432 111224666554 689999999998763 22 244433222 223455653 333321
Q ss_pred CCcceeecCCCCCCCCCCeEEEEecCCCCCCc---eeeeEEeeccccccCCCCCCcccEEEEccccCCCCcccceecCCc
Q 015960 173 HKLRSIPVGVSANLRIGQKVYAIGHPLGRKFT---CTAGIISAFGLEPITATGPPIQGLIQIDAAINRGNSGGPLLDSSG 249 (397)
Q Consensus 173 ~~~~~~~l~~s~~~~~G~~V~~iG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvn~~G 249 (397)
+ |. ..=.-.+.|-++-.+.+.... .+.|+..-.. + ..--+.-...+|.||+|++|.+|
T Consensus 134 -k-----L~--~~W~g~~eVqv~A~~Pg~~~~~~qt~PG~~~~~~-------g----~igav~lD~p~GTSGSPIin~~G 194 (236)
T 3lkw_A 134 -R-----FQ--GSWNAGEEVQVIAVEPGKNPKNVQTAPGTFKTPE-------G----EVGAIALDFKPGTAGSPIVNREG 194 (236)
T ss_dssp -C-----CC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEETT-------E----EEEEECCCCCTTCTTCEEECTTS
T ss_pred -c-----CC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcCC-------C----eEEEEECCCCCCCCCCceecCCC
Confidence 1 11 111223556666666554432 2344442211 1 11222333468999999999999
Q ss_pred cEEEEEeee
Q 015960 250 SLIGVNTSI 258 (397)
Q Consensus 250 ~vVGI~s~~ 258 (397)
+|||+.-.+
T Consensus 195 ~VvGLYGnG 203 (236)
T 3lkw_A 195 KIVGLYGNG 203 (236)
T ss_dssp CEEEESCCE
T ss_pred cEEEEecce
Confidence 999995433
No 343
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=90.39 E-value=1.1 Score=36.96 Aligned_cols=138 Identities=16% Similarity=0.263 Sum_probs=72.1
Q ss_pred ceeEEEEEcCCCEEEEcccccC-CCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC-CCCcceeecCCCCCCCCCCe
Q 015960 114 ATGTGFIWDEDGHIVTNHHVIE-GASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP-NHKLRSIPVGVSANLRIGQK 191 (397)
Q Consensus 114 ~~GSG~ii~~~G~ILT~aHvv~-~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~-~~~~~~~~l~~s~~~~~G~~ 191 (397)
+.|-||-|++. ..+|+-||+. ++.++. |. +...+.++..-++..+++..+ ..+++-..|... ...|+.
T Consensus 26 gsgwgfwVS~~-~fIT~tHV~p~~~~e~f-----G~--p~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEeg--~peGtV 95 (194)
T 2fyq_A 26 GSGWGFWVSPT-VFITTTHVVPTGVKEFF-----GE--PLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEG--CPEGTV 95 (194)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCSSCSEET-----TE--EGGGEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTCE
T ss_pred cCceeEEEccc-EEEEEeeecCCCChhhc-----Cc--eeeeEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCcE
Confidence 46899999987 9999999995 444321 11 112234455667888888765 235555566432 233666
Q ss_pred EEE-EecCCCC--CCceeeeEEeeccccccCCCCCC-----cccEEEEccccCCCCcccceecCCc---cEEEEEeeeec
Q 015960 192 VYA-IGHPLGR--KFTCTAGIISAFGLEPITATGPP-----IQGLIQIDAAINRGNSGGPLLDSSG---SLIGVNTSIIT 260 (397)
Q Consensus 192 V~~-iG~p~g~--~~~~~~G~vs~~~~~~~~~~~~~-----~~~~i~~~~~i~~G~SGGPlvn~~G---~vVGI~s~~~~ 260 (397)
+.+ +-.+.+. ...+..|.+....-......+.. -.+.--.|-...|||-|.|-+-..| -|+|++++...
T Consensus 96 ~silikR~sgellPlaVRmgt~as~kIqGk~v~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~Aatr 175 (194)
T 2fyq_A 96 CSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAAATK 175 (194)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEEEEETTEEEEEEEEEECC-----------CGGGTTCEEEEEETTEEEEEEEEEEECS
T ss_pred EEEEEecCCCCcceEEEEecceeeeEEeeeEecceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEeecc
Confidence 544 3344433 12334444433221100000000 0111223456679999999996554 48999988754
Q ss_pred c
Q 015960 261 R 261 (397)
Q Consensus 261 ~ 261 (397)
.
T Consensus 176 s 176 (194)
T 2fyq_A 176 S 176 (194)
T ss_dssp S
T ss_pred C
Confidence 3
No 344
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=90.37 E-value=0.23 Score=39.12 Aligned_cols=29 Identities=24% Similarity=0.461 Sum_probs=24.4
Q ss_pred ccccCCCCcccceecCCccEEEEEeeeec
Q 015960 232 DAAINRGNSGGPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 232 ~~~i~~G~SGGPlvn~~G~vVGI~s~~~~ 260 (397)
...-.+|+||-|++|..|+||+|+-.+.+
T Consensus 93 ~G~g~~GdSGrpI~Dn~GrVVaIVlGG~~ 121 (149)
T 1vcp_A 93 TGAGKPGDSGRPIFDNKGRVVAIVLGGAN 121 (149)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred ccCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 33457899999999999999999987754
No 345
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=90.05 E-value=0.41 Score=38.15 Aligned_cols=30 Identities=30% Similarity=0.494 Sum_probs=25.0
Q ss_pred ccccCCCCcccceecCCccEEEEEeeeecc
Q 015960 232 DAAINRGNSGGPLLDSSGSLIGVNTSIITR 261 (397)
Q Consensus 232 ~~~i~~G~SGGPlvn~~G~vVGI~s~~~~~ 261 (397)
...-.+|+||-|++|..|+||+|+-.+.+.
T Consensus 101 ~g~g~~GdSGrPi~Dn~GrVVaIVlGG~ne 130 (158)
T 4agk_A 101 TGAGGPGDSGRPILDNSGKVVAIVLGGANE 130 (158)
T ss_dssp TTSSCTTCTTCEEECTTSCEEEEEEEEEEC
T ss_pred cccCCCCCCCCccccCCCCEEEEEecCCCc
Confidence 344578999999999999999999877543
No 346
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=89.88 E-value=0.26 Score=39.43 Aligned_cols=28 Identities=25% Similarity=0.527 Sum_probs=23.9
Q ss_pred cccCCCCcccceecCCccEEEEEeeeec
Q 015960 233 AAINRGNSGGPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 233 ~~i~~G~SGGPlvn~~G~vVGI~s~~~~ 260 (397)
..-.+|+||-|++|..|+||+|+-.+.+
T Consensus 103 GvG~~GDSGRpI~DN~GrVVaivlgg~~ 130 (161)
T 1svp_A 103 GVGGRGDAGRPIMDNSGRVVAIVLGGAD 130 (161)
T ss_dssp TSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred cCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 3346899999999999999999987754
No 347
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=89.40 E-value=0.45 Score=37.89 Aligned_cols=29 Identities=24% Similarity=0.538 Sum_probs=24.5
Q ss_pred ccccCCCCcccceecCCccEEEEEeeeec
Q 015960 232 DAAINRGNSGGPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 232 ~~~i~~G~SGGPlvn~~G~vVGI~s~~~~ 260 (397)
...-.+|+||-|++|..|+||+|+-.+.+
T Consensus 100 ~G~g~~GdSGrpI~Dn~GrVVaIVlGGa~ 128 (157)
T 1ep5_B 100 KGVGAKGDSGRPILDNQGRVVAIVLGGVN 128 (157)
T ss_dssp TTCCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred cCCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 34457899999999999999999987754
No 348
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=89.16 E-value=0.39 Score=41.83 Aligned_cols=28 Identities=21% Similarity=0.482 Sum_probs=24.0
Q ss_pred cccCCCCcccceecCCccEEEEEeeeec
Q 015960 233 AAINRGNSGGPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 233 ~~i~~G~SGGPlvn~~G~vVGI~s~~~~ 260 (397)
..-.+||||-|++|..|+||+|+-.+.+
T Consensus 198 G~G~~GDSGRpI~DN~GrVVaIVLGGan 225 (253)
T 2yew_A 198 GSGKPGDSGRPIFDNTGKVVAIVLGGAN 225 (253)
T ss_dssp TSCCSSCTTCEEECSSCBEEEEEEEEEE
T ss_pred CCCCCCCCCCccccCCCcEEEEEecCCC
Confidence 3446899999999999999999987754
No 349
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=87.93 E-value=0.47 Score=41.70 Aligned_cols=28 Identities=29% Similarity=0.540 Sum_probs=23.9
Q ss_pred cccCCCCcccceecCCccEEEEEeeeec
Q 015960 233 AAINRGNSGGPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 233 ~~i~~G~SGGPlvn~~G~vVGI~s~~~~ 260 (397)
..-.+||||-|++|..|+||+|+-.+.+
T Consensus 208 G~G~~GDSGRpI~DN~GrVVaIVLGGan 235 (264)
T 1kxf_A 208 GVGGRGDSGRPIMDNSGRVVAIVLGGAD 235 (264)
T ss_dssp TSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred cCCCCCCCCCccccCCCcEEEEEecCCC
Confidence 3446899999999999999999987754
No 350
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=81.51 E-value=0.97 Score=38.22 Aligned_cols=43 Identities=23% Similarity=0.522 Sum_probs=28.9
Q ss_pred ccCCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccch
Q 015960 234 AINRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTV 277 (397)
Q Consensus 234 ~i~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i 277 (397)
....|.||||++-..|.+|||..+.....+-...+ .++|++.+
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai-~fvPve~l 196 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAV-DFIPVESL 196 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEE-EEEEHHHH
T ss_pred eeccCCCCCceecCCCCEEEEEEEEEEcCceeeeE-EEEEcccc
Confidence 34679999999999999999986654433322223 33576544
No 351
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=63.07 E-value=32 Score=23.27 Aligned_cols=38 Identities=8% Similarity=0.097 Sum_probs=33.7
Q ss_pred cCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC
Q 015960 134 IEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171 (397)
Q Consensus 134 v~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~ 171 (397)
+...+++-++..||..|.++++.++...+=+++++...
T Consensus 4 f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 4 LWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred cccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 44567888899999999999999999999999999874
No 352
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=59.29 E-value=41 Score=23.87 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=29.7
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+++.++|+..++.|=....
T Consensus 15 k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 15 KKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 578999999999999999999999999887754
No 353
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=59.22 E-value=19 Score=25.70 Aligned_cols=59 Identities=20% Similarity=0.188 Sum_probs=40.3
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHP 198 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p 198 (397)
..+.|.+.+|+.+.+++.++|...++.|=.+......-....++ .-.-.|+.|..+.-|
T Consensus 15 ~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e~~~~~~~~~lg--~v~iRG~~I~~i~~~ 73 (77)
T 1i4k_A 15 SPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEIQNGEVVRKVG--SVVIRGDTVVFVSPA 73 (77)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEEETTEEEEEEE--EEEECGGGEEEEEEC
T ss_pred CEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEEEecCCcEeECC--EEEECCCEEEEEEeC
Confidence 57899999999999999999999999987775421111222222 123456767666555
No 354
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=57.85 E-value=17 Score=36.81 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=32.5
Q ss_pred CcEEEEECCEecCCHHHHH-------------HHHh----------cCCCCCEEEEEEEE-CCeEEEEEEEee
Q 015960 342 GDIIKAVNGEDVSNANDLH-------------NILD----------QCKVGDEVIVRILR-GTQLEEILIILE 390 (397)
Q Consensus 342 GDiI~~vng~~v~~~~d~~-------------~~l~----------~~~~g~~v~l~v~R-~g~~~~~~v~l~ 390 (397)
||.|++|||+++..+-+-. .+++ ...|-+.++|++.| +|+.+++.++-.
T Consensus 113 GdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~~G~~~~v~~pW~ 185 (583)
T 3dor_A 113 GDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFGTTREVRVKWR 185 (583)
T ss_dssp TCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECTTSCEEEEEEECE
T ss_pred CCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECCCCcEEEEEeeeE
Confidence 9999999999987643211 1111 11244588999866 588888877643
No 355
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=57.82 E-value=26 Score=25.31 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=38.9
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEec
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGH 197 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~ 197 (397)
..+.|.+.+|+.+.+++.++|+..++.|=.+......-....++ .-.-.|+.|..+.-
T Consensus 20 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e~~~~~~~~~lg--~v~iRG~~I~~i~~ 77 (81)
T 1th7_A 20 NLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLG--TIVIRGDNVILISP 77 (81)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEEECSSSCEEEEE--EEEECGGGEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEEEecCCceeECC--EEEECCCEEEEEEe
Confidence 57899999999999999999999999988775422121222222 11344666655543
No 356
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=52.41 E-value=53 Score=22.89 Aligned_cols=38 Identities=8% Similarity=-0.021 Sum_probs=32.9
Q ss_pred cCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC
Q 015960 134 IEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171 (397)
Q Consensus 134 v~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~ 171 (397)
....+.+..+..||..|+|+|+.++....-+++++...
T Consensus 14 f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 14 FEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp SCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 34456788888999999999999999999999999874
No 357
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=52.23 E-value=13 Score=31.87 Aligned_cols=43 Identities=23% Similarity=0.514 Sum_probs=29.4
Q ss_pred CCCCcccceecCCccEEEEEeeeeccCCCccCceeeEeccchhH
Q 015960 236 NRGNSGGPLLDSSGSLIGVNTSIITRTDAFCGMACSIPIDTVSG 279 (397)
Q Consensus 236 ~~G~SGGPlvn~~G~vVGI~s~~~~~~~~~~~~~~aip~~~i~~ 279 (397)
..|.||+||+-+.|++||+-....-..+-...+-| +|.+.+..
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~ 188 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLET 188 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eecccccc
Confidence 56889999999999999986654433333344555 67765543
No 358
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=52.16 E-value=27 Score=24.68 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=29.6
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+++.++|+..++.|=....
T Consensus 15 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 578999999999999999999999999877754
No 359
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=50.13 E-value=26 Score=25.85 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=29.4
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+.+.++|+..+|.|=....
T Consensus 15 k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 578999999999999999999999999877644
No 360
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=49.32 E-value=60 Score=22.16 Aligned_cols=35 Identities=11% Similarity=0.103 Sum_probs=27.3
Q ss_pred CCCeEEEEe-cCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 136 GASSVKVTL-FDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 136 ~~~~i~V~~-~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
-.+.+...+ .||.+|+|++..++...+-+.+.+..
T Consensus 11 vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 11 VGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp TTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 345566676 49999999999999877778777765
No 361
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=48.65 E-value=33 Score=24.90 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=29.6
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.||+.+.+++.++|+..++.|=.+..
T Consensus 26 ~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 578999999999999999999999999877654
No 362
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=46.87 E-value=24 Score=29.30 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=24.4
Q ss_pred cEEEEccccCCCCcccceecCCccEEEEEeee
Q 015960 227 GLIQIDAAINRGNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 227 ~~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~ 258 (397)
..+....+..||+-||.|. ...-||||++++
T Consensus 113 ~vl~~~G~~epGDCGG~L~-C~HGviGivTaG 143 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILR-CEHGVIGLVTMG 143 (166)
T ss_dssp SEEEEECSSSCCCCBSEEE-CSSSEEEEEEEE
T ss_pred cEEEEecCCCCCCCCceee-eCCCceEEEecC
Confidence 3444556788999999999 455699999987
No 363
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=46.85 E-value=51 Score=24.30 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=28.8
Q ss_pred CeEEEEecCCcEEEEEEEEEcC-CCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQ-GTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~-~~DlAlL~v~~ 170 (397)
.++.|.+.||+.|.+.+..+|| ...+.|+....
T Consensus 18 KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~~ 51 (86)
T 1y96_A 18 KEVRVTASEKNEYKGWVLTTDPVSANIVLVNFLE 51 (86)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTTCCEEEEEECT
T ss_pred CEEEEEEcCCCEEEEEEEEECCCceEEEEeeccc
Confidence 5799999999999999999995 67999988733
No 364
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=46.29 E-value=40 Score=23.90 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=29.5
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 16 ~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 578999999999999999999999999887754
No 365
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=45.94 E-value=39 Score=24.74 Aligned_cols=60 Identities=17% Similarity=0.019 Sum_probs=40.2
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecC
Q 015960 137 ASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHP 198 (397)
Q Consensus 137 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p 198 (397)
...+.|.+.+|+.+.+++.++|...++.|=.+......-....++ .-+-.|+.|..++-|
T Consensus 16 ~k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e~~~g~~~~~lg--~v~IRG~nI~~i~~~ 75 (86)
T 3s6n_F 16 GKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG--EVLIRCNNVLYIRGV 75 (86)
T ss_dssp TSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEEETTEEEEEES--SEEECGGGEEEEEEC
T ss_pred CCeEEEEEcCCeEEEEEEEEEcCceEEEEeeEEEEcCCceeeEcc--EEEEeCCeEEEEEeC
Confidence 357899999999999999999999999887765311111122232 123456666666555
No 366
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=45.79 E-value=31 Score=24.43 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=28.8
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 15 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 4emk_B 15 KKVLIRLSSGVDYKGILSCLDGYMNLALERTEE 47 (75)
T ss_dssp SEEEEECTTSCEEEEEEEEECTTCEEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCcceEEEccEEE
Confidence 578999999999999999999999988766543
No 367
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=44.85 E-value=39 Score=25.16 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=29.8
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 137 ASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 137 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
...+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 19 ~~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 19 DEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp TSEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 3678999999999999999999999999877654
No 368
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=44.26 E-value=32 Score=24.77 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=29.4
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+++.++|+..++.|=.+..
T Consensus 22 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 578999999999999999999999998877654
No 369
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=44.15 E-value=46 Score=23.62 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=29.3
Q ss_pred CeEEEEecCC-cEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDK-TTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g-~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+| +.+.+++.++|+..++.|=.+..
T Consensus 16 ~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 5788999999 99999999999999999877754
No 370
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=43.90 E-value=41 Score=25.18 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=29.0
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 579999999999999999999999998876643
No 371
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=43.59 E-value=54 Score=24.40 Aligned_cols=59 Identities=17% Similarity=0.072 Sum_probs=39.1
Q ss_pred CCeEEEEecCC-cEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEec
Q 015960 137 ASSVKVTLFDK-TTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGH 197 (397)
Q Consensus 137 ~~~i~V~~~~g-~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~ 197 (397)
...+.|.+.+| +.+.+++.++|...++.|=.+......-....++ .-+-.|+.|..+.-
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E~~~~~~~~~lg--~v~IRG~nI~~I~~ 90 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLG--EIFIRCNNVLYIRE 90 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEEEETTEEEEECC--SEEECGGGEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEEEcCCCeEeEcC--EEEEcCCeEEEEEe
Confidence 46799999999 9999999999999999887765421111222332 12345666665543
No 372
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=43.14 E-value=42 Score=26.05 Aligned_cols=34 Identities=15% Similarity=0.257 Sum_probs=29.8
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 137 ASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 137 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
...+.|.+.||+.+.+.+.++|...+|.|=.+..
T Consensus 33 ~k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 33 DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp CSEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 3578999999999999999999999999877654
No 373
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=42.23 E-value=36 Score=25.52 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=29.4
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.+|+.+.+.+.++|+..++.|=....
T Consensus 21 k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 21 ERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp SEEEEEEGGGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCCCcEEEcCEEE
Confidence 579999999999999999999999999877643
No 374
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=42.18 E-value=69 Score=25.00 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=42.0
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCCC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPLG 200 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~g 200 (397)
..+.|.+.+|..+.+++.++|...++.|=.+......-....++ .-+-.|+.|..+.-|..
T Consensus 13 k~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg--~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLE--TLSIRGNNIRYFILPDS 73 (119)
T ss_dssp CEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCTT
T ss_pred CEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcc--eEEEcCCeEEEEEeccc
Confidence 57899999999999999999999999987775421111222332 12345777777766643
No 375
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=41.77 E-value=43 Score=26.11 Aligned_cols=34 Identities=12% Similarity=0.230 Sum_probs=30.4
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 137 ASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 137 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 4689999999999999999999999999877754
No 376
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=41.11 E-value=25 Score=28.51 Aligned_cols=30 Identities=30% Similarity=0.452 Sum_probs=23.7
Q ss_pred EEEEccccCCCCcccceecCCccEEEEEeee
Q 015960 228 LIQIDAAINRGNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 228 ~i~~~~~i~~G~SGGPlvn~~G~vVGI~s~~ 258 (397)
.+....+..||+-||.|.- ..-||||++++
T Consensus 94 ~l~g~G~~epGDCGG~L~C-~HGviGivTaG 123 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLLC-KHGVIGIVTAG 123 (142)
T ss_dssp EEEEECCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred EEEEEcCCCCCCCCceeee-CCCceEEEecC
Confidence 3444567889999999994 55699999987
No 377
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=39.73 E-value=15 Score=30.07 Aligned_cols=22 Identities=27% Similarity=0.516 Sum_probs=19.0
Q ss_pred CCCcccceecCCccEEEEEeee
Q 015960 237 RGNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 237 ~G~SGGPlvn~~G~vVGI~s~~ 258 (397)
.+-++-|++|.+|+++|+++..
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~~ 68 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITES 68 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEGG
T ss_pred cCCeEEEEEcCCccEEEEEEHH
Confidence 4678899999999999999854
No 378
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=38.10 E-value=58 Score=24.91 Aligned_cols=61 Identities=10% Similarity=0.051 Sum_probs=39.4
Q ss_pred CCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCC-CCcceeecCCCCCCCCCCeEEEEecCC
Q 015960 137 ASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPN-HKLRSIPVGVSANLRIGQKVYAIGHPL 199 (397)
Q Consensus 137 ~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~-~~~~~~~l~~s~~~~~G~~V~~iG~p~ 199 (397)
...+.|.+.+|+.+.+++.++|...++.|=.+.... +.-....++ .-+-.|+.|..+.-|-
T Consensus 26 gk~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~e~~~dg~~~~~lg--~v~IRG~nI~~I~~pd 87 (105)
T 4emh_A 26 GRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLP--ECYIRGNNIKYLRIQD 87 (105)
T ss_dssp CCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEECTTSCEEEEEE--EEEECGGGEEEEEC--
T ss_pred CCEEEEEECCCCEEEEEEEEEcCCceEEEEEEEEEccCCceeeEcC--eEEEeCCeEEEEecCH
Confidence 357899999999999999999999999987765311 111122221 1234566666665553
No 379
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=36.66 E-value=39 Score=29.75 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=28.4
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..+.|.+.||+.+.+++.++|+..+|.|=.+..
T Consensus 15 KrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred CeEEEEECCCcEEEEEEEEEcccccEEecCEEE
Confidence 578999999999999999999999988765543
No 380
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=34.06 E-value=1e+02 Score=20.46 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=26.1
Q ss_pred CCeEEEEec-CCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 137 ASSVKVTLF-DKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 137 ~~~i~V~~~-~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
.+.+...+. ||.+|+|++...++..+-+.+++..
T Consensus 7 G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~D 41 (59)
T 1mhn_A 7 GDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTG 41 (59)
T ss_dssp TCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEc
Confidence 344556665 8999999999998777778888755
No 381
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=33.59 E-value=52 Score=23.17 Aligned_cols=20 Identities=30% Similarity=0.360 Sum_probs=17.2
Q ss_pred EEEEEEEECCeEEEEEEEee
Q 015960 371 EVIVRILRGTQLEEILIILE 390 (397)
Q Consensus 371 ~v~l~v~R~g~~~~~~v~l~ 390 (397)
.+++++.|+|++.++.+.+.
T Consensus 7 ditikiqrdgqeieidirvs 26 (96)
T 2jvf_A 7 DITIKIQRDGQEIEIDIRVS 26 (96)
T ss_dssp EEEEEEEETTEEEEEEEECC
T ss_pred EEEEEEeeCCeEEEEEEEEc
Confidence 47899999999999988765
No 382
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=33.30 E-value=21 Score=29.02 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=14.8
Q ss_pred cceecCCccEEEEEeee
Q 015960 242 GPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~ 258 (397)
-|++|.+|+++||++..
T Consensus 118 lpVVd~~g~l~GiiT~~ 134 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITRK 134 (156)
T ss_dssp EEEECTTSBEEEEEEHH
T ss_pred eEEEecCCEEEEEEEHH
Confidence 58999999999998753
No 383
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=32.38 E-value=72 Score=24.33 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=29.4
Q ss_pred EEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCC-CCCCCCeEEE-Eec
Q 015960 150 LDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSA-NLRIGQKVYA-IGH 197 (397)
Q Consensus 150 ~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~-~~~~G~~V~~-iG~ 197 (397)
++++|+.++...++|++.+... ...+.+..-. ++++||+|++ +|+
T Consensus 26 IP~kVveI~~~~~~A~Vd~~Gv---~reV~l~Lv~e~~~vGDyVLVHvGf 72 (103)
T 3d3r_A 26 IPSQVVAVDNERQSVTVDTLGV---RRDVSSHLMTEPLAIGDYVLIHIGF 72 (103)
T ss_dssp CCEEEEEEETTTTEEEEEETTE---EEEEECTTBSSCCCTTCEEEEEEEE
T ss_pred cCEEEEEEeCCCCEEEEEcCCE---EEEEEEEeecCCCCCCCEEEEeech
Confidence 4688888875558999988752 2333333222 4789999877 454
No 384
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=32.29 E-value=25 Score=28.10 Aligned_cols=18 Identities=28% Similarity=0.392 Sum_probs=14.7
Q ss_pred cceecCCccEEEEEeeee
Q 015960 242 GPLLDSSGSLIGVNTSII 259 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~ 259 (397)
.|+.|.+|++||+++.++
T Consensus 111 ~PV~~~~g~viGvv~vg~ 128 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIGL 128 (142)
T ss_dssp EEEECTTSCEEEEEEEEE
T ss_pred EeEEcCCCCEEEEEEEeE
Confidence 488887899999987663
No 385
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=32.11 E-value=23 Score=27.22 Aligned_cols=21 Identities=19% Similarity=0.156 Sum_probs=16.5
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+..--|++|.+|+++||++..
T Consensus 98 ~~~~lpVvd~~g~~~Giit~~ 118 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTIE 118 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEeCCCCEEEEEEHH
Confidence 334568999999999998753
No 386
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=32.05 E-value=25 Score=28.53 Aligned_cols=23 Identities=9% Similarity=0.118 Sum_probs=18.9
Q ss_pred CCCCcccceecCCccEEEEEeee
Q 015960 236 NRGNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 236 ~~G~SGGPlvn~~G~vVGI~s~~ 258 (397)
..|.|+=|++|.+|+++|+++..
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~~ 67 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGLR 67 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEHH
T ss_pred HcCCcEEEEEcCCCcEEEEEEec
Confidence 46889999999999999998753
No 387
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=31.41 E-value=62 Score=23.15 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=30.7
Q ss_pred CCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC
Q 015960 136 GASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171 (397)
Q Consensus 136 ~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~ 171 (397)
..+++-++..||..|.++++.++...+-+++++++.
T Consensus 29 eGeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 29 EGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp TTCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred cCCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 345666777899999999999999999999999875
No 388
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=31.08 E-value=24 Score=27.56 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=16.2
Q ss_pred CcccceecCCccEEEEEeee
Q 015960 239 NSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~ 258 (397)
-.--|++|.+|+++||++..
T Consensus 100 ~~~~~Vvd~~g~lvGiit~~ 119 (136)
T 3lfr_A 100 NHMAIVIDEYGGVAGLVTIE 119 (136)
T ss_dssp CCEEEEECTTSCEEEEEEHH
T ss_pred CeEEEEEeCCCCEEEEEEHH
Confidence 34568999999999999864
No 389
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=30.38 E-value=26 Score=26.91 Aligned_cols=19 Identities=37% Similarity=0.389 Sum_probs=15.5
Q ss_pred cccceecCCccEEEEEeee
Q 015960 240 SGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~ 258 (397)
..-|++|.+|+++|+++..
T Consensus 100 ~~lpVvd~~g~~~Giit~~ 118 (128)
T 3gby_A 100 SVVPLADEDGRYEGVVSRK 118 (128)
T ss_dssp SEEEEECTTCBEEEEEEHH
T ss_pred cEEEEECCCCCEEEEEEHH
Confidence 3468999999999998753
No 390
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=30.33 E-value=25 Score=27.21 Aligned_cols=19 Identities=26% Similarity=0.365 Sum_probs=15.6
Q ss_pred cccceecCCccEEEEEeee
Q 015960 240 SGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~ 258 (397)
.--|++|.+|+++||++..
T Consensus 101 ~~~~Vvd~~g~lvGiit~~ 119 (130)
T 3hf7_A 101 KVGLVVDEYGDIQGLVTVE 119 (130)
T ss_dssp CEEEEECTTSCEEEEEEHH
T ss_pred eEEEEEcCCCCEEEEeeHH
Confidence 4568899999999998753
No 391
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=30.04 E-value=26 Score=27.02 Aligned_cols=21 Identities=19% Similarity=0.211 Sum_probs=16.3
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+..--|++|.+|+++||++..
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~~ 121 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTLE 121 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEcCCCCEEEEEEHH
Confidence 334568899999999998753
No 392
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=29.49 E-value=48 Score=25.99 Aligned_cols=32 Identities=9% Similarity=0.236 Sum_probs=28.0
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEc
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHID 169 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~ 169 (397)
..+.|.+.+|+.+.+++.++|+..++.|=.+.
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 56899999999999999999999998876553
No 393
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=29.33 E-value=26 Score=27.01 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=15.4
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+..--|++|.+|+++||++..
T Consensus 98 ~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEHH
T ss_pred CCeEEEEEeCCCCEEEEEEHH
Confidence 334568899999999998753
No 394
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=29.06 E-value=90 Score=24.67 Aligned_cols=60 Identities=12% Similarity=0.070 Sum_probs=39.5
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPL 199 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~ 199 (397)
..+.|.+.+|+.|.+++..+|...++.|-.+......=....++ .-.-.|..|..+--|.
T Consensus 16 k~V~VeLknG~~~~G~L~~~D~~MNi~L~dv~e~~~~g~~~~l~--~v~IRGnnI~~I~lpd 75 (126)
T 2y9a_D 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLE--QVYIRGSKIRFLILPD 75 (126)
T ss_dssp CEEEEEESSCCEEEEEEEEECTTSCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCS
T ss_pred CEEEEEECCCcEEEEEEEEEcCceEEEEeeEEEEcCCCcEeecc--cEEEeCCEEEEEEccc
Confidence 57889999999999999999999999988775421010122221 1133466666655554
No 395
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=29.06 E-value=1.5e+02 Score=20.94 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.1
Q ss_pred CCeEEEEec-CCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 137 ASSVKVTLF-DKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 137 ~~~i~V~~~-~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
.+.+...+. |+.+|+|+|..++...+-+.+++-.
T Consensus 13 G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiD 47 (78)
T 2d9t_A 13 GDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTD 47 (78)
T ss_dssp TCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEc
Confidence 344555664 8999999999988766777777754
No 396
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=28.80 E-value=1.5e+02 Score=20.73 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=30.4
Q ss_pred cccCCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC
Q 015960 132 HVIEGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171 (397)
Q Consensus 132 Hvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~ 171 (397)
+.....+++-++..||..|-++++ +...+=+++++++.
T Consensus 14 ~~~~~geDVL~rw~DG~fYLGtIV--d~~~~~ClV~FeD~ 51 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDGRFYLGTII--DQTSDQYLIRFDDQ 51 (69)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEE--EECSSCEEEEETTC
T ss_pred cccccCCeEEEEecCCCEEEEEEE--ecCCceEEEEecCC
Confidence 444556778888899999999994 56688899999875
No 397
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=28.64 E-value=95 Score=24.69 Aligned_cols=56 Identities=9% Similarity=0.061 Sum_probs=40.2
Q ss_pred CeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEEecCC
Q 015960 138 SSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAIGHPL 199 (397)
Q Consensus 138 ~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~iG~p~ 199 (397)
..+.|.+.+|+.+.+++.++|...++.|=.+.... . ..++ .-+-.|+.|..+.-|.
T Consensus 11 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E~~-~---~~lg--~v~IRG~nI~~I~~~d 66 (130)
T 1m5q_A 11 REVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKA-G---EKFN--RVFIMYRYIVHIDSTE 66 (130)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEECTT-C---CEEE--EEEECGGGEEEEEECC
T ss_pred CeEEEEECCCcEEEEEEEEEcccceeEEeeEEEEc-C---CEec--eEEEeCCeEEEEEcCC
Confidence 57889999999999999999999999988876532 1 1221 1134567776666553
No 398
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.28 E-value=1.5e+02 Score=20.57 Aligned_cols=37 Identities=8% Similarity=0.074 Sum_probs=32.3
Q ss_pred CCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC
Q 015960 135 EGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171 (397)
Q Consensus 135 ~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~ 171 (397)
...+++-.+..||..|.++|..++....-+++++.+.
T Consensus 11 ~eGqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD~ 47 (68)
T 2e5p_A 11 WEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 47 (68)
T ss_dssp CTTCEEEEECTTSSEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCEEEEEecCCcEEEeEEEEEecCCcEEEEEEccC
Confidence 4456778888999999999999999999999999874
No 399
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=28.25 E-value=1.5e+02 Score=21.73 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=27.9
Q ss_pred cCCCCeEEEEec-CCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 134 IEGASSVKVTLF-DKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 134 v~~~~~i~V~~~-~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
..-.+.+...+. ||.+|+|+|..++...+-+.+.+..
T Consensus 11 ~kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiD 48 (88)
T 1g5v_A 11 WKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTG 48 (88)
T ss_dssp CCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETT
T ss_pred CCCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEec
Confidence 333455666665 9999999999998876778777755
No 400
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.12 E-value=1.6e+02 Score=20.84 Aligned_cols=35 Identities=11% Similarity=0.054 Sum_probs=26.9
Q ss_pred CCCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 135 EGASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 135 ~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
.-.+.+..++.||.+|+|+|..++.. +-+.+++..
T Consensus 11 kvGd~clA~wsDg~~Y~A~I~~v~~~-~~~~V~f~D 45 (74)
T 2equ_A 11 KAGEEVLARWTDCRYYPAKIEAINKE-GTFTVQFYD 45 (74)
T ss_dssp CTTCEEEEECSSSSEEEEEEEEESTT-SSEEEEETT
T ss_pred CCCCEEEEECCCCCEEEEEEEEECCC-CEEEEEEec
Confidence 33456677778999999999999865 667777765
No 401
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=26.66 E-value=39 Score=26.40 Aligned_cols=19 Identities=32% Similarity=0.602 Sum_probs=15.8
Q ss_pred cceecCCccEEEEEeeeec
Q 015960 242 GPLLDSSGSLIGVNTSIIT 260 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~~~ 260 (397)
.|+.|.+|++||+++.++.
T Consensus 106 ~PV~~~~g~viGvv~vg~~ 124 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYT 124 (131)
T ss_dssp EEEECTTCCEEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEEE
Confidence 4888888999999987754
No 402
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=26.64 E-value=31 Score=27.64 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=15.2
Q ss_pred cccceecCCccEEEEEee
Q 015960 240 SGGPLLDSSGSLIGVNTS 257 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~ 257 (397)
.--|++|.+|+++||++.
T Consensus 134 ~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 134 HMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp CEEEEECTTSSEEEEEEH
T ss_pred eEEEEECCCCCEEEEEEH
Confidence 446899999999999875
No 403
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=26.60 E-value=33 Score=25.78 Aligned_cols=21 Identities=33% Similarity=0.490 Sum_probs=16.4
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+.+--|++|.+|+++|+++..
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~~ 112 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTSE 112 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEHH
T ss_pred CCCeEEEECCCCCEEEEEeHH
Confidence 344568999899999998753
No 404
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=26.47 E-value=32 Score=27.12 Aligned_cols=20 Identities=25% Similarity=0.119 Sum_probs=16.0
Q ss_pred CcccceecCCccEEEEEeee
Q 015960 239 NSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~ 258 (397)
-.--|++|.+|+++||++..
T Consensus 118 ~~~l~Vvd~~g~~~Giit~~ 137 (148)
T 3lv9_A 118 LQLAIVVDEYGGTSGVVTIE 137 (148)
T ss_dssp CSEEEEECTTSSEEEEEEHH
T ss_pred CeEEEEEeCCCCEEEEEEHH
Confidence 34569999999999998753
No 405
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=26.08 E-value=1.8e+02 Score=20.63 Aligned_cols=39 Identities=13% Similarity=0.005 Sum_probs=28.4
Q ss_pred cccCCCCeEEEEe-cCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 132 HVIEGASSVKVTL-FDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 132 Hvv~~~~~i~V~~-~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
|...-.+.+...+ .||.+|+|+|..++...+-+.+.+-.
T Consensus 16 ~~~kvGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvD 55 (77)
T 3pnw_C 16 KMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFID 55 (77)
T ss_dssp TTCCTTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETT
T ss_pred CCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEc
Confidence 3344445566666 49999999999998777777777654
No 406
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=25.82 E-value=30 Score=27.58 Aligned_cols=20 Identities=20% Similarity=0.200 Sum_probs=16.0
Q ss_pred CcccceecCCccEEEEEeee
Q 015960 239 NSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~ 258 (397)
..--|++|.+|+++||++..
T Consensus 116 ~~~lpVvd~~g~~vGivt~~ 135 (153)
T 3oco_A 116 VPMAIVIDEYGGTSGIITDK 135 (153)
T ss_dssp CSCEEEECTTSCEEEEECHH
T ss_pred CcEEEEEeCCCCEEEEeeHH
Confidence 34569999999999998753
No 407
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=25.26 E-value=1.2e+02 Score=21.54 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=26.9
Q ss_pred EEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCCCCCCCCCeEEEE
Q 015960 150 LDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVSANLRIGQKVYAI 195 (397)
Q Consensus 150 ~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s~~~~~G~~V~~i 195 (397)
++++++..+. +.|++.+... ...+.+.--.+.++||+|++-
T Consensus 5 IP~kVvei~~--~~A~vd~~Gv---~r~V~l~Lv~~~~vGD~VLVH 45 (75)
T 2z1c_A 5 VPGKVIEVNG--PVAVVDFGGV---KREVRLDLMPDTKPGDWVIVH 45 (75)
T ss_dssp CCEEEEEEET--TEEEEEETTE---EEEEECTTSTTCCTTCEEEEE
T ss_pred ccEEEEEECC--CEEEEEcCCE---EEEEEEEEeCCCCCCCEEEEe
Confidence 4678887743 7899887652 233444433557899999873
No 408
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=25.03 E-value=35 Score=26.81 Aligned_cols=17 Identities=18% Similarity=0.129 Sum_probs=14.6
Q ss_pred cceecCCccEEEEEeee
Q 015960 242 GPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 242 GPlvn~~G~vVGI~s~~ 258 (397)
-|++|.+|+++||++..
T Consensus 119 l~Vvd~~g~~~Giit~~ 135 (150)
T 3lqn_A 119 ICAVNEDGYFEGILTRR 135 (150)
T ss_dssp EEEECTTCBEEEEEEHH
T ss_pred EEEECCCCcEEEEEEHH
Confidence 68999999999998753
No 409
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=24.73 E-value=35 Score=29.15 Aligned_cols=21 Identities=33% Similarity=0.423 Sum_probs=16.5
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+-.--|++|.+|+++||++..
T Consensus 146 ~~~~lpVVD~~g~lvGiIT~~ 166 (205)
T 3kxr_A 146 REIELPVIDDAGELIGRVTLR 166 (205)
T ss_dssp SCSEEEEECTTSBEEEEEEHH
T ss_pred CCCEEEEEcCCCeEEEEEEHH
Confidence 334569999999999998753
No 410
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=24.21 E-value=38 Score=26.21 Aligned_cols=20 Identities=30% Similarity=0.243 Sum_probs=15.8
Q ss_pred CcccceecCCccEEEEEeee
Q 015960 239 NSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~ 258 (397)
...-|++|.+|+++|+++..
T Consensus 114 ~~~l~Vvd~~g~~~Giit~~ 133 (144)
T 2nyc_A 114 VHRFFVVDDVGRLVGVLTLS 133 (144)
T ss_dssp CSEEEEECTTSBEEEEEEHH
T ss_pred CCEEEEECCCCCEEEEEEHH
Confidence 34568999899999998753
No 411
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=23.61 E-value=39 Score=25.83 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=15.8
Q ss_pred CcccceecCCccEEEEEeee
Q 015960 239 NSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~ 258 (397)
.+.-|++|.+|+++|+++..
T Consensus 98 ~~~l~Vvd~~g~~~Giit~~ 117 (133)
T 2ef7_A 98 IRHLPVVDDKGNLKGIISIR 117 (133)
T ss_dssp CSEEEEECTTSCEEEEEEHH
T ss_pred CCEEEEECCCCeEEEEEEHH
Confidence 34468999899999998753
No 412
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=23.43 E-value=40 Score=26.77 Aligned_cols=14 Identities=36% Similarity=0.750 Sum_probs=0.0
Q ss_pred ceecCCccEEEEEe
Q 015960 243 PLLDSSGSLIGVNT 256 (397)
Q Consensus 243 Plvn~~G~vVGI~s 256 (397)
|++|.+|+++|+++
T Consensus 119 pVvd~~g~~~Giit 132 (156)
T 3ctu_A 119 PVVDAEGIFQGIIT 132 (156)
T ss_dssp EEECTTSBEEEEEE
T ss_pred EEEcCCCeEEEEEE
No 413
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=23.26 E-value=40 Score=26.29 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=16.5
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+-+--|++|.+|+++||++..
T Consensus 115 ~~~~l~Vvd~~g~~~Giit~~ 135 (152)
T 4gqw_A 115 KYRRLPVVDSDGKLVGIITRG 135 (152)
T ss_dssp SCCEEEEECTTSBEEEEEEHH
T ss_pred CCCEEEEECCCCcEEEEEEHH
Confidence 444568999999999998753
No 414
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=22.70 E-value=42 Score=26.08 Aligned_cols=19 Identities=21% Similarity=0.323 Sum_probs=15.6
Q ss_pred cccceecCCccEEEEEeee
Q 015960 240 SGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~ 258 (397)
.--|++|.+|+++|+++..
T Consensus 102 ~~l~Vvd~~g~~~Giit~~ 120 (141)
T 2rih_A 102 RHVVVVNKNGELVGVLSIR 120 (141)
T ss_dssp SEEEEECTTSCEEEEEEHH
T ss_pred eEEEEEcCCCcEEEEEEHH
Confidence 3468999899999998864
No 415
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=22.66 E-value=41 Score=27.47 Aligned_cols=21 Identities=29% Similarity=0.278 Sum_probs=16.5
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+-.--|++|.+|+++||++..
T Consensus 136 ~~~~~pVvd~~g~lvGiit~~ 156 (172)
T 3lhh_A 136 GSQMVFVVDEYGDLKGLVTLQ 156 (172)
T ss_dssp TCSEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEeCCCCEEEEeeHH
Confidence 334568999999999998753
No 416
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=22.03 E-value=44 Score=26.43 Aligned_cols=14 Identities=14% Similarity=0.368 Sum_probs=0.0
Q ss_pred ceecCCccEEEEEe
Q 015960 243 PLLDSSGSLIGVNT 256 (397)
Q Consensus 243 Plvn~~G~vVGI~s 256 (397)
|++|.+|+++||++
T Consensus 128 pVvd~~g~~vGiit 141 (152)
T 2uv4_A 128 VVVDENDVVKGIVS 141 (152)
T ss_dssp EEECTTSBEEEEEE
T ss_pred EEECCCCeEEEEEE
No 417
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=22.01 E-value=43 Score=27.12 Aligned_cols=21 Identities=33% Similarity=0.428 Sum_probs=16.8
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+-.--|++|.+|+++||++..
T Consensus 128 ~~~~lpVvd~~g~~vGiit~~ 148 (180)
T 3sl7_A 128 KFRRLPVVDADGKLIGILTRG 148 (180)
T ss_dssp TTCEEEEECTTCBEEEEEEHH
T ss_pred CCCEEEEECCCCeEEEEEEHH
Confidence 445569999999999998754
No 418
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.70 E-value=2e+02 Score=19.66 Aligned_cols=36 Identities=8% Similarity=0.012 Sum_probs=31.1
Q ss_pred CCCeEEEEecCCcEEEEEEEEEcCCCCeEEEEEcCC
Q 015960 136 GASSVKVTLFDKTTLDAKVVGHDQGTDLAVLHIDAP 171 (397)
Q Consensus 136 ~~~~i~V~~~~g~~~~a~vv~~d~~~DlAlL~v~~~ 171 (397)
..+++-.+..||..|.++++.++....-+++++.+.
T Consensus 10 eGqdVLarWsDGlfYlgtV~kV~~~~~~ClV~FeD~ 45 (63)
T 2e5q_A 10 EGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDN 45 (63)
T ss_dssp TTCEEEEECTTSCEEEEEECCCCSTTSEEEEEETTS
T ss_pred cCCEEEEEecCCCEEEEEEEEEecCCCEEEEEEccC
Confidence 446677788899999999999999999999999874
No 419
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=21.39 E-value=40 Score=27.76 Aligned_cols=20 Identities=25% Similarity=0.238 Sum_probs=15.9
Q ss_pred CcccceecCCccEEEEEeee
Q 015960 239 NSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 239 ~SGGPlvn~~G~vVGI~s~~ 258 (397)
..--|++|.+|+++||++..
T Consensus 130 ~~~~~Vvde~g~lvGiIT~~ 149 (173)
T 3ocm_A 130 GQLVLVADEFGAIEGLVTPI 149 (173)
T ss_dssp TCCEEEECTTCCEEEEECHH
T ss_pred CeEEEEEeCCCCEEEEEeHH
Confidence 34568899999999998753
No 420
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=20.95 E-value=49 Score=25.42 Aligned_cols=19 Identities=21% Similarity=0.429 Sum_probs=15.3
Q ss_pred cccceecCCccEEEEEeee
Q 015960 240 SGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~ 258 (397)
+.-|++|.+|+++|+++..
T Consensus 110 ~~l~Vvd~~g~~~Giit~~ 128 (138)
T 2p9m_A 110 NQLPVVDKNNKLVGIISDG 128 (138)
T ss_dssp CEEEEECTTSBEEEEEEHH
T ss_pred cEEEEECCCCeEEEEEEHH
Confidence 4568898899999998753
No 421
>3s6n_E Small nuclear ribonucleoprotein E; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_E 2y9c_E 2y9d_E 3cw1_E 3pgw_E* 2y9a_E
Probab=20.85 E-value=1.3e+02 Score=22.21 Aligned_cols=26 Identities=12% Similarity=0.240 Sum_probs=23.3
Q ss_pred cCCcEEEEEEEEEcCCCCeEEEEEcC
Q 015960 145 FDKTTLDAKVVGHDQGTDLAVLHIDA 170 (397)
Q Consensus 145 ~~g~~~~a~vv~~d~~~DlAlL~v~~ 170 (397)
.+|+.+.+++.++|...++.|=....
T Consensus 38 ~~gr~~~G~L~gfD~~mNlvL~d~~E 63 (92)
T 3s6n_E 38 QVNMRIEGCIIGFDEYMNLVLDDAEE 63 (92)
T ss_dssp SCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred cCCEEEEEEEEEEcCcCcEEEeeeEE
Confidence 89999999999999999999877654
No 422
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=20.75 E-value=50 Score=22.85 Aligned_cols=20 Identities=15% Similarity=0.332 Sum_probs=14.4
Q ss_pred CCcccceecCCccEEEEEeee
Q 015960 238 GNSGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 238 G~SGGPlvn~~G~vVGI~s~~ 258 (397)
+-++=|++| +|+++||.+-.
T Consensus 22 ~i~~~~V~d-~~~lvGIvT~~ 41 (70)
T 3ghd_A 22 KAGSAVVME-GDEILGVVTER 41 (70)
T ss_dssp TCSEEEEEE-TTEEEEEEEHH
T ss_pred CCCEEEEEE-CCEEEEEEEHH
Confidence 445567775 78999999853
No 423
>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} SCOP: b.40.14.1
Probab=20.46 E-value=2.2e+02 Score=21.01 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=25.9
Q ss_pred EEEEEEEEcCCCCeEEEEEcCCCCCcceeecCCC------CCCCCCCeEEEE
Q 015960 150 LDAKVVGHDQGTDLAVLHIDAPNHKLRSIPVGVS------ANLRIGQKVYAI 195 (397)
Q Consensus 150 ~~a~vv~~d~~~DlAlL~v~~~~~~~~~~~l~~s------~~~~~G~~V~~i 195 (397)
++++++..+.. .|++.+... ...+.+.-- ..+.+||+|++-
T Consensus 5 IP~kVvei~~~--~A~Vd~~Gv---~r~V~l~Lv~~~~~~~~~~vGD~VLVH 51 (90)
T 2ot2_A 5 VPGQIRTIDGN--QAKVDVCGI---QRDVDLTLVGSCDENGQPRVGQWVLVH 51 (90)
T ss_dssp EEEEEEEECSS--EEEEECSSS---EEEEECTTTCSBCTTSCBCTTCEEEEE
T ss_pred cceEEEEEcCC--cEEEEcCCe---EEEEEEeeeeccCCCCCCCCCCEEEEe
Confidence 67888888654 388877552 233333322 457899999873
No 424
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=20.36 E-value=49 Score=26.13 Aligned_cols=14 Identities=21% Similarity=0.337 Sum_probs=0.0
Q ss_pred ceecCCccEEEEEe
Q 015960 243 PLLDSSGSLIGVNT 256 (397)
Q Consensus 243 Plvn~~G~vVGI~s 256 (397)
|++|.+|+++|+++
T Consensus 116 ~Vvd~~g~~~Giit 129 (157)
T 2emq_A 116 CVENDDGYFAGIFT 129 (157)
T ss_dssp EEECSSSSEEEEEE
T ss_pred EEEcCCCeEEEEEE
No 425
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=20.06 E-value=50 Score=26.24 Aligned_cols=19 Identities=26% Similarity=0.545 Sum_probs=15.4
Q ss_pred cccceecCCccEEEEEeee
Q 015960 240 SGGPLLDSSGSLIGVNTSI 258 (397)
Q Consensus 240 SGGPlvn~~G~vVGI~s~~ 258 (397)
..-|++|.+|+++|+++..
T Consensus 127 ~~lpVvd~~g~~vGiit~~ 145 (157)
T 1o50_A 127 QEMPVVDEKGEIVGDLNSL 145 (157)
T ss_dssp SEEEEECTTSCEEEEEEHH
T ss_pred cEEEEEcCCCEEEEEEEHH
Confidence 4568999899999998753
Done!