Query 015961
Match_columns 397
No_of_seqs 219 out of 2778
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 02:31:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015961.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015961hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1088 RfbB dTDP-D-glucose 4, 100.0 4.5E-39 9.9E-44 280.3 25.8 306 27-395 1-321 (340)
2 COG1087 GalE UDP-glucose 4-epi 100.0 7E-38 1.5E-42 274.4 24.9 296 27-391 1-322 (329)
3 PRK15181 Vi polysaccharide bio 100.0 1.6E-37 3.5E-42 294.9 27.3 301 26-393 15-340 (348)
4 PLN02427 UDP-apiose/xylose syn 100.0 2.8E-34 6.2E-39 276.7 27.6 325 17-392 6-370 (386)
5 PLN02572 UDP-sulfoquinovose sy 100.0 5.6E-34 1.2E-38 277.4 27.6 306 23-393 44-416 (442)
6 PLN02214 cinnamoyl-CoA reducta 100.0 3.3E-33 7.1E-38 264.6 29.2 298 24-397 8-323 (342)
7 PLN02695 GDP-D-mannose-3',5'-e 100.0 1.9E-33 4E-38 268.7 27.5 298 25-393 20-332 (370)
8 PLN02166 dTDP-glucose 4,6-dehy 100.0 1.4E-33 3.1E-38 273.3 25.9 286 27-393 121-426 (436)
9 TIGR01472 gmd GDP-mannose 4,6- 100.0 3.4E-33 7.4E-38 265.1 26.6 311 27-392 1-341 (343)
10 PRK11908 NAD-dependent epimera 100.0 2.1E-33 4.6E-38 267.0 24.9 311 27-393 2-338 (347)
11 PRK10217 dTDP-glucose 4,6-dehy 100.0 3.9E-33 8.5E-38 266.1 26.6 307 27-393 2-334 (355)
12 PRK08125 bifunctional UDP-gluc 100.0 4E-33 8.7E-38 285.0 27.6 316 26-394 315-653 (660)
13 PLN02653 GDP-mannose 4,6-dehyd 100.0 7.5E-33 1.6E-37 262.5 27.2 300 23-392 3-330 (340)
14 PLN02260 probable rhamnose bio 100.0 9.6E-33 2.1E-37 283.6 29.4 302 25-394 5-323 (668)
15 PLN00198 anthocyanidin reducta 100.0 1.2E-32 2.5E-37 261.0 27.8 303 23-396 6-336 (338)
16 KOG0747 Putative NAD+-dependen 100.0 5.2E-33 1.1E-37 240.4 21.1 302 27-393 7-325 (331)
17 PLN02206 UDP-glucuronate decar 100.0 1.8E-32 3.9E-37 266.1 27.6 286 27-393 120-425 (442)
18 KOG1502 Flavonol reductase/cin 100.0 1.8E-32 3.9E-37 247.2 25.4 304 25-397 5-327 (327)
19 PLN02662 cinnamyl-alcohol dehy 100.0 2E-32 4.3E-37 257.8 26.4 298 26-396 4-321 (322)
20 PLN02989 cinnamyl-alcohol dehy 100.0 4E-32 8.7E-37 256.0 28.4 301 26-396 5-325 (325)
21 PRK11150 rfaD ADP-L-glycero-D- 100.0 8.7E-33 1.9E-37 258.5 23.3 289 29-391 2-307 (308)
22 PLN02240 UDP-glucose 4-epimera 100.0 5.6E-32 1.2E-36 257.9 28.0 303 25-395 4-343 (352)
23 PLN02986 cinnamyl-alcohol dehy 100.0 1.1E-31 2.3E-36 252.7 27.2 298 26-396 5-322 (322)
24 PLN02650 dihydroflavonol-4-red 100.0 1E-31 2.2E-36 255.8 26.9 299 26-397 5-326 (351)
25 TIGR02622 CDP_4_6_dhtase CDP-g 100.0 1.6E-31 3.4E-36 254.3 26.8 300 25-393 3-331 (349)
26 PRK10675 UDP-galactose-4-epime 100.0 5.6E-31 1.2E-35 249.6 27.1 299 27-393 1-332 (338)
27 TIGR03466 HpnA hopanoid-associ 100.0 7.9E-31 1.7E-35 247.4 27.8 320 27-396 1-328 (328)
28 PRK10084 dTDP-glucose 4,6 dehy 100.0 6.3E-31 1.4E-35 250.6 26.8 310 27-393 1-337 (352)
29 TIGR01181 dTDP_gluc_dehyt dTDP 100.0 1.2E-30 2.5E-35 245.0 27.4 296 28-395 1-315 (317)
30 PLN02725 GDP-4-keto-6-deoxyman 100.0 3.4E-31 7.3E-36 247.6 23.5 282 30-393 1-300 (306)
31 PRK09987 dTDP-4-dehydrorhamnos 100.0 3.4E-31 7.3E-36 246.3 23.3 286 27-390 1-293 (299)
32 COG0451 WcaG Nucleoside-diphos 100.0 2.1E-30 4.5E-35 243.0 27.0 296 28-394 2-312 (314)
33 PLN02896 cinnamyl-alcohol dehy 100.0 1.8E-30 4E-35 247.3 25.9 305 26-397 10-346 (353)
34 PF01073 3Beta_HSD: 3-beta hyd 100.0 9.7E-31 2.1E-35 239.5 22.7 250 30-301 1-274 (280)
35 KOG1429 dTDP-glucose 4-6-dehyd 100.0 1.6E-30 3.4E-35 224.9 22.0 291 23-392 24-332 (350)
36 PLN00016 RNA-binding protein; 100.0 8.9E-31 1.9E-35 251.4 22.5 294 20-396 46-356 (378)
37 TIGR02197 heptose_epim ADP-L-g 100.0 3.1E-30 6.6E-35 242.0 23.7 291 29-391 1-313 (314)
38 TIGR01214 rmlD dTDP-4-dehydror 100.0 5.2E-30 1.1E-34 237.4 23.7 280 28-388 1-285 (287)
39 KOG1430 C-3 sterol dehydrogena 100.0 1.2E-29 2.6E-34 233.6 24.3 327 26-393 4-348 (361)
40 KOG1371 UDP-glucose 4-epimeras 100.0 2.5E-29 5.5E-34 222.9 22.2 301 25-394 1-336 (343)
41 TIGR01179 galE UDP-glucose-4-e 100.0 2.6E-28 5.7E-33 230.0 24.7 297 28-393 1-328 (328)
42 COG1089 Gmd GDP-D-mannose dehy 100.0 2.6E-28 5.5E-33 211.4 20.9 316 25-391 1-339 (345)
43 PLN02686 cinnamoyl-CoA reducta 100.0 1.7E-28 3.8E-33 234.2 22.0 269 4-300 31-328 (367)
44 CHL00194 ycf39 Ycf39; Provisio 100.0 2.1E-28 4.5E-33 229.6 19.4 295 27-390 1-299 (317)
45 TIGR01777 yfcH conserved hypot 100.0 2.9E-28 6.3E-33 226.1 18.9 236 29-299 1-245 (292)
46 PRK05865 hypothetical protein; 100.0 2.4E-27 5.3E-32 241.9 22.8 258 27-393 1-259 (854)
47 PRK07201 short chain dehydroge 99.9 7E-26 1.5E-30 233.3 27.3 324 27-392 1-353 (657)
48 PF04321 RmlD_sub_bind: RmlD s 99.9 4.4E-27 9.5E-32 216.6 15.6 276 27-390 1-285 (286)
49 PLN02583 cinnamoyl-CoA reducta 99.9 2.1E-25 4.6E-30 207.2 23.1 241 26-297 6-265 (297)
50 TIGR03589 PseB UDP-N-acetylglu 99.9 1.7E-25 3.6E-30 210.4 22.5 266 25-386 3-286 (324)
51 PF01370 Epimerase: NAD depend 99.9 6.7E-27 1.4E-31 210.1 11.1 223 29-277 1-236 (236)
52 COG1090 Predicted nucleoside-d 99.9 1.2E-25 2.5E-30 195.4 17.6 236 29-300 1-244 (297)
53 COG1091 RfbD dTDP-4-dehydrorha 99.9 1.7E-24 3.7E-29 192.9 24.3 273 28-389 2-279 (281)
54 PLN02996 fatty acyl-CoA reduct 99.9 3.9E-25 8.4E-30 217.6 22.3 264 25-299 10-361 (491)
55 KOG1431 GDP-L-fucose synthetas 99.9 3.4E-24 7.4E-29 179.6 17.2 286 27-393 2-309 (315)
56 TIGR01746 Thioester-redct thio 99.9 1.2E-22 2.5E-27 194.5 27.2 323 28-396 1-367 (367)
57 PLN02778 3,5-epimerase/4-reduc 99.9 9.1E-23 2E-27 189.3 24.9 224 25-298 8-240 (298)
58 PLN02657 3,8-divinyl protochlo 99.9 3.1E-23 6.6E-28 199.2 20.0 227 24-300 58-301 (390)
59 PLN02503 fatty acyl-CoA reduct 99.9 4.1E-22 8.9E-27 197.7 21.8 259 26-297 119-474 (605)
60 PRK12320 hypothetical protein; 99.9 1.4E-20 3.1E-25 188.7 24.5 201 27-294 1-202 (699)
61 PLN02260 probable rhamnose bio 99.9 1.4E-20 3.1E-25 193.6 24.0 222 25-296 379-609 (668)
62 TIGR03649 ergot_EASG ergot alk 99.9 6.7E-21 1.4E-25 176.2 17.1 211 28-301 1-219 (285)
63 COG1086 Predicted nucleoside-d 99.9 2.3E-20 4.9E-25 177.8 20.7 229 25-297 249-497 (588)
64 PF02719 Polysacc_synt_2: Poly 99.9 1E-21 2.2E-26 176.2 9.3 225 29-298 1-250 (293)
65 KOG1372 GDP-mannose 4,6 dehydr 99.8 4.3E-20 9.4E-25 157.0 15.9 309 27-388 29-364 (376)
66 COG3320 Putative dehydrogenase 99.8 3.4E-19 7.3E-24 162.6 20.2 255 27-293 1-289 (382)
67 TIGR03443 alpha_am_amid L-amin 99.8 2.5E-18 5.4E-23 191.2 30.1 338 26-397 971-1356(1389)
68 PF07993 NAD_binding_4: Male s 99.8 2.2E-20 4.7E-25 169.1 9.0 167 31-210 1-202 (249)
69 PLN00141 Tic62-NAD(P)-related 99.8 1.3E-18 2.7E-23 157.9 15.5 234 16-293 8-250 (251)
70 PF13460 NAD_binding_10: NADH( 99.8 5.4E-18 1.2E-22 146.2 11.5 149 29-209 1-149 (183)
71 KOG2865 NADH:ubiquinone oxidor 99.8 2.1E-16 4.4E-21 137.7 20.3 229 25-299 60-297 (391)
72 PLN03209 translocon at the inn 99.7 3E-17 6.5E-22 160.3 15.9 227 23-292 77-321 (576)
73 PRK06482 short chain dehydroge 99.7 5.9E-17 1.3E-21 149.1 15.3 229 25-296 1-263 (276)
74 KOG1221 Acyl-CoA reductase [Li 99.7 4.8E-17 1E-21 154.3 14.8 258 25-296 11-332 (467)
75 PF05368 NmrA: NmrA-like famil 99.7 3.6E-17 7.7E-22 146.7 9.7 224 29-299 1-229 (233)
76 PRK09135 pteridine reductase; 99.7 7.6E-16 1.6E-20 139.3 17.3 214 25-283 5-248 (249)
77 PRK07806 short chain dehydroge 99.6 3.2E-15 6.9E-20 135.3 14.8 217 25-281 5-244 (248)
78 PRK12826 3-ketoacyl-(acyl-carr 99.6 1.1E-14 2.3E-19 131.9 17.1 214 23-280 3-247 (251)
79 PRK08263 short chain dehydroge 99.6 3.3E-15 7.1E-20 137.4 13.8 235 25-296 2-263 (275)
80 PRK12825 fabG 3-ketoacyl-(acyl 99.6 1E-14 2.2E-19 131.7 15.7 212 25-282 5-248 (249)
81 COG0702 Predicted nucleoside-d 99.6 8.6E-14 1.9E-18 127.8 21.5 224 27-301 1-224 (275)
82 PRK13394 3-hydroxybutyrate deh 99.6 1.1E-14 2.5E-19 132.7 14.7 161 25-209 6-193 (262)
83 PRK05875 short chain dehydroge 99.6 4.5E-14 9.7E-19 129.9 18.1 227 26-297 7-272 (276)
84 TIGR01963 PHB_DH 3-hydroxybuty 99.6 9.2E-15 2E-19 132.7 12.1 156 27-209 2-186 (255)
85 PRK12429 3-hydroxybutyrate deh 99.6 1.7E-14 3.7E-19 131.2 12.8 156 26-209 4-189 (258)
86 PRK07074 short chain dehydroge 99.6 3.2E-14 6.9E-19 129.5 14.5 230 25-293 1-254 (257)
87 PRK12745 3-ketoacyl-(acyl-carr 99.6 1.2E-13 2.5E-18 125.6 18.1 158 25-209 1-196 (256)
88 PRK05653 fabG 3-ketoacyl-(acyl 99.6 6.1E-14 1.3E-18 126.4 15.8 157 26-209 5-190 (246)
89 KOG3019 Predicted nucleoside-d 99.6 6E-14 1.3E-18 118.4 14.3 250 1-300 1-263 (315)
90 PRK06180 short chain dehydroge 99.6 2.6E-13 5.5E-18 125.0 19.2 158 25-209 3-186 (277)
91 PRK12829 short chain dehydroge 99.6 3E-14 6.5E-19 130.1 12.9 159 24-209 9-196 (264)
92 PRK07774 short chain dehydroge 99.6 8.4E-14 1.8E-18 126.1 14.5 215 25-282 5-248 (250)
93 PRK12746 short chain dehydroge 99.5 2.4E-13 5.2E-18 123.4 17.3 158 25-209 5-196 (254)
94 PRK07067 sorbitol dehydrogenas 99.5 4.5E-14 9.7E-19 128.5 12.2 223 25-282 5-256 (257)
95 PRK06914 short chain dehydroge 99.5 4.6E-13 1E-17 123.4 18.4 157 25-209 2-189 (280)
96 PRK09134 short chain dehydroge 99.5 2.4E-13 5.2E-18 123.8 16.0 215 22-285 5-249 (258)
97 PRK07775 short chain dehydroge 99.5 4.5E-13 9.9E-18 123.1 17.5 156 26-208 10-194 (274)
98 PRK06128 oxidoreductase; Provi 99.5 1.2E-12 2.6E-17 121.9 19.5 213 26-282 55-299 (300)
99 PRK12384 sorbitol-6-phosphate 99.5 2.8E-13 6.1E-18 123.4 15.0 158 25-209 1-190 (259)
100 PRK12828 short chain dehydroge 99.5 4E-13 8.6E-18 120.6 14.9 156 26-208 7-189 (239)
101 PRK07453 protochlorophyllide o 99.5 3.6E-13 7.8E-18 126.8 14.6 121 25-150 5-150 (322)
102 PRK06179 short chain dehydroge 99.5 3.6E-13 7.7E-18 123.5 14.2 156 26-209 4-181 (270)
103 PRK07523 gluconate 5-dehydroge 99.5 5.3E-13 1.2E-17 121.3 15.2 215 25-283 9-254 (255)
104 PRK12823 benD 1,6-dihydroxycyc 99.5 1.3E-12 2.9E-17 119.0 17.3 156 25-209 7-191 (260)
105 PRK06077 fabG 3-ketoacyl-(acyl 99.5 3.2E-13 7E-18 122.4 13.1 213 26-281 6-246 (252)
106 TIGR03206 benzo_BadH 2-hydroxy 99.5 6.8E-13 1.5E-17 120.1 15.2 157 26-209 3-188 (250)
107 PRK06123 short chain dehydroge 99.5 2.6E-12 5.7E-17 116.1 18.9 164 25-209 1-193 (248)
108 PRK05557 fabG 3-ketoacyl-(acyl 99.5 2.5E-12 5.5E-17 116.0 18.2 115 26-145 5-142 (248)
109 PRK12827 short chain dehydroge 99.5 1.7E-12 3.6E-17 117.4 17.0 158 25-209 5-196 (249)
110 PRK08063 enoyl-(acyl carrier p 99.5 1E-12 2.2E-17 118.9 15.4 212 26-281 4-247 (250)
111 PRK09186 flagellin modificatio 99.5 6.5E-13 1.4E-17 120.7 14.0 166 25-208 3-203 (256)
112 PRK12935 acetoacetyl-CoA reduc 99.5 1.1E-12 2.3E-17 118.6 15.3 208 26-279 6-244 (247)
113 PRK06138 short chain dehydroge 99.5 1.1E-12 2.4E-17 118.8 14.8 158 25-209 4-189 (252)
114 PRK09291 short chain dehydroge 99.5 7.6E-13 1.7E-17 120.3 12.9 116 25-145 1-132 (257)
115 PRK07577 short chain dehydroge 99.5 5E-12 1.1E-16 113.2 17.9 152 26-209 3-175 (234)
116 PRK07890 short chain dehydroge 99.5 5.2E-13 1.1E-17 121.5 11.7 158 25-209 4-190 (258)
117 PRK07024 short chain dehydroge 99.4 8.6E-13 1.9E-17 120.1 12.5 157 25-208 1-186 (257)
118 PRK07231 fabG 3-ketoacyl-(acyl 99.4 1.6E-12 3.4E-17 117.7 14.1 116 26-146 5-142 (251)
119 PRK05993 short chain dehydroge 99.4 6.9E-13 1.5E-17 122.1 11.9 156 24-208 2-183 (277)
120 PRK07060 short chain dehydroge 99.4 2.1E-12 4.6E-17 116.5 14.6 158 25-209 8-186 (245)
121 PRK08219 short chain dehydroge 99.4 2.1E-12 4.7E-17 115.0 14.1 112 25-145 2-129 (227)
122 COG2910 Putative NADH-flavin r 99.4 4.6E-12 9.9E-17 104.0 14.4 206 27-277 1-210 (211)
123 PRK08220 2,3-dihydroxybenzoate 99.4 4E-12 8.6E-17 115.2 15.6 155 26-209 8-184 (252)
124 PRK06197 short chain dehydroge 99.4 1.7E-12 3.7E-17 121.2 13.5 124 17-147 7-154 (306)
125 PRK06196 oxidoreductase; Provi 99.4 1.5E-12 3.3E-17 122.1 12.9 169 25-209 25-217 (315)
126 PRK06194 hypothetical protein; 99.4 3.3E-12 7.2E-17 118.1 14.8 115 26-145 6-148 (287)
127 PRK06182 short chain dehydroge 99.4 1.3E-12 2.9E-17 119.9 11.7 154 26-209 3-182 (273)
128 PRK08264 short chain dehydroge 99.4 3.8E-12 8.3E-17 114.3 14.4 157 25-208 5-181 (238)
129 PRK05565 fabG 3-ketoacyl-(acyl 99.4 1.1E-11 2.4E-16 111.9 17.3 117 24-145 3-142 (247)
130 PRK06701 short chain dehydroge 99.4 1.7E-11 3.8E-16 113.5 18.8 157 26-209 46-231 (290)
131 PLN02253 xanthoxin dehydrogena 99.4 8.2E-12 1.8E-16 115.1 16.4 158 25-209 17-204 (280)
132 PRK12824 acetoacetyl-CoA reduc 99.4 1.1E-11 2.3E-16 111.8 16.2 158 25-209 1-188 (245)
133 PRK05876 short chain dehydroge 99.4 7.4E-12 1.6E-16 115.1 15.3 156 25-208 5-191 (275)
134 PRK06101 short chain dehydroge 99.4 4E-12 8.8E-17 114.4 13.1 155 27-208 2-176 (240)
135 PRK07666 fabG 3-ketoacyl-(acyl 99.4 4.8E-12 1E-16 113.8 13.6 156 26-208 7-191 (239)
136 PRK12743 oxidoreductase; Provi 99.4 2.2E-11 4.8E-16 110.7 17.9 158 25-209 1-189 (256)
137 PRK09730 putative NAD(P)-bindi 99.4 2E-11 4.4E-16 110.1 17.6 162 27-209 2-192 (247)
138 PRK08324 short chain dehydroge 99.4 9E-12 1.9E-16 128.5 16.9 221 24-281 420-676 (681)
139 PRK07326 short chain dehydroge 99.4 2.7E-12 5.9E-17 115.2 11.0 116 25-145 5-140 (237)
140 PRK06523 short chain dehydroge 99.4 6.5E-12 1.4E-16 114.4 13.6 157 25-209 8-188 (260)
141 PRK05717 oxidoreductase; Valid 99.4 2.4E-12 5.2E-17 117.0 10.6 161 22-209 6-192 (255)
142 PRK06500 short chain dehydroge 99.4 4.2E-12 9.1E-17 114.8 12.0 158 25-209 5-186 (249)
143 TIGR01830 3oxo_ACP_reduc 3-oxo 99.4 9.5E-12 2.1E-16 111.7 14.2 112 29-145 1-135 (239)
144 PRK06398 aldose dehydrogenase; 99.4 1.3E-11 2.8E-16 112.4 15.1 113 24-145 4-131 (258)
145 PRK08267 short chain dehydroge 99.4 4.9E-12 1.1E-16 115.3 12.3 114 27-145 2-136 (260)
146 PRK12936 3-ketoacyl-(acyl-carr 99.4 8.9E-12 1.9E-16 112.4 13.8 115 26-145 6-139 (245)
147 PRK08251 short chain dehydroge 99.4 1.2E-11 2.6E-16 111.9 14.2 116 25-145 1-140 (248)
148 PRK12937 short chain dehydroge 99.4 3.1E-11 6.6E-16 108.9 16.5 116 25-145 4-140 (245)
149 PRK12939 short chain dehydroge 99.4 4E-11 8.8E-16 108.4 17.3 115 26-145 7-143 (250)
150 PRK08213 gluconate 5-dehydroge 99.4 6.9E-12 1.5E-16 114.2 12.3 161 25-208 11-201 (259)
151 KOG2774 NAD dependent epimeras 99.4 5E-12 1.1E-16 107.5 10.3 245 24-295 42-299 (366)
152 PRK07102 short chain dehydroge 99.4 7.9E-12 1.7E-16 112.7 12.4 155 27-208 2-183 (243)
153 PRK07454 short chain dehydroge 99.3 9.2E-12 2E-16 112.1 12.0 156 26-208 6-190 (241)
154 PRK10538 malonic semialdehyde 99.3 1.2E-11 2.6E-16 111.9 12.7 156 27-209 1-183 (248)
155 PRK08643 acetoin reductase; Va 99.3 1.8E-11 3.9E-16 111.3 13.8 157 25-208 1-187 (256)
156 PRK08628 short chain dehydroge 99.3 2.2E-11 4.8E-16 110.8 14.3 158 25-209 6-189 (258)
157 PRK06550 fabG 3-ketoacyl-(acyl 99.3 2.7E-11 5.9E-16 108.6 14.6 115 24-145 3-127 (235)
158 PRK08217 fabG 3-ketoacyl-(acyl 99.3 2.9E-11 6.2E-16 109.5 14.5 208 26-280 5-251 (253)
159 PRK05854 short chain dehydroge 99.3 1.9E-11 4.1E-16 114.5 13.3 173 21-208 9-212 (313)
160 PRK12744 short chain dehydroge 99.3 7.6E-11 1.7E-15 107.2 16.9 104 25-133 7-134 (257)
161 PRK07023 short chain dehydroge 99.3 1.4E-11 3E-16 111.1 11.7 155 27-208 2-184 (243)
162 PRK07985 oxidoreductase; Provi 99.3 2.4E-11 5.2E-16 112.8 13.5 158 25-209 48-235 (294)
163 PRK07825 short chain dehydroge 99.3 1.4E-11 3E-16 113.1 11.8 115 26-145 5-137 (273)
164 COG0300 DltE Short-chain dehyd 99.3 2.7E-11 5.8E-16 108.0 12.8 159 22-208 2-191 (265)
165 PRK05866 short chain dehydroge 99.3 2.7E-11 5.9E-16 112.3 13.4 115 26-145 40-178 (293)
166 PRK05693 short chain dehydroge 99.3 1.2E-11 2.6E-16 113.7 10.8 114 27-145 2-130 (274)
167 PRK07856 short chain dehydroge 99.3 2.6E-11 5.7E-16 109.9 12.9 115 25-145 5-135 (252)
168 PRK06181 short chain dehydroge 99.3 1.8E-11 3.8E-16 111.8 11.7 155 27-208 2-185 (263)
169 PRK06171 sorbitol-6-phosphate 99.3 3.6E-11 7.9E-16 109.9 13.8 114 25-145 8-145 (266)
170 TIGR01832 kduD 2-deoxy-D-gluco 99.3 2.4E-11 5.1E-16 109.9 12.4 158 25-209 4-189 (248)
171 PRK06057 short chain dehydroge 99.3 1.5E-11 3.3E-16 111.7 11.1 158 25-209 6-190 (255)
172 PRK12748 3-ketoacyl-(acyl-carr 99.3 1.1E-10 2.3E-15 106.2 16.5 116 25-145 4-154 (256)
173 PRK05650 short chain dehydroge 99.3 3.5E-11 7.5E-16 110.3 13.2 155 27-209 1-185 (270)
174 PRK06953 short chain dehydroge 99.3 2.9E-11 6.3E-16 107.5 12.2 163 27-208 2-179 (222)
175 PRK08642 fabG 3-ketoacyl-(acyl 99.3 2.1E-11 4.6E-16 110.5 11.5 157 25-208 4-194 (253)
176 PRK08177 short chain dehydroge 99.3 3.4E-11 7.4E-16 107.3 12.6 113 27-144 2-130 (225)
177 PRK05786 fabG 3-ketoacyl-(acyl 99.3 1.3E-11 2.8E-16 110.9 9.9 158 25-208 4-185 (238)
178 PRK12742 oxidoreductase; Provi 99.3 3.5E-11 7.6E-16 108.0 12.6 159 24-208 4-181 (237)
179 PRK06947 glucose-1-dehydrogena 99.3 2.6E-11 5.7E-16 109.6 11.9 159 25-209 1-193 (248)
180 PRK07904 short chain dehydroge 99.3 1.3E-10 2.8E-15 105.5 15.5 154 25-208 7-194 (253)
181 TIGR01829 AcAcCoA_reduct aceto 99.3 2E-10 4.3E-15 103.4 16.4 114 27-145 1-137 (242)
182 COG4221 Short-chain alcohol de 99.3 1.7E-10 3.7E-15 100.0 14.8 155 26-208 6-188 (246)
183 PRK09242 tropinone reductase; 99.3 2.2E-10 4.8E-15 104.1 16.5 158 25-209 8-196 (257)
184 PRK06841 short chain dehydroge 99.3 6.5E-11 1.4E-15 107.5 12.7 116 25-145 14-148 (255)
185 PRK07063 short chain dehydroge 99.3 5.7E-11 1.2E-15 108.2 12.3 116 25-145 6-145 (260)
186 PRK06463 fabG 3-ketoacyl-(acyl 99.3 7.4E-11 1.6E-15 107.2 12.9 115 26-145 7-138 (255)
187 PRK08226 short chain dehydroge 99.3 5.1E-11 1.1E-15 108.7 11.7 116 25-145 5-141 (263)
188 PRK08278 short chain dehydroge 99.3 1.4E-10 2.9E-15 106.6 14.5 104 25-133 5-135 (273)
189 PRK08017 oxidoreductase; Provi 99.2 9.7E-11 2.1E-15 106.4 13.1 114 25-145 1-133 (256)
190 PRK07814 short chain dehydroge 99.2 4E-11 8.7E-16 109.5 10.7 116 25-145 9-147 (263)
191 PRK06124 gluconate 5-dehydroge 99.2 1.4E-10 3.1E-15 105.4 13.8 116 25-145 10-147 (256)
192 PRK06949 short chain dehydroge 99.2 7.5E-11 1.6E-15 107.2 12.0 104 24-132 7-130 (258)
193 PRK08265 short chain dehydroge 99.2 1.1E-10 2.3E-15 106.5 12.8 116 25-145 5-137 (261)
194 PRK06935 2-deoxy-D-gluconate 3 99.2 9.9E-11 2.2E-15 106.5 12.5 157 25-208 14-198 (258)
195 PRK07478 short chain dehydroge 99.2 1.3E-10 2.8E-15 105.5 12.9 116 25-145 5-143 (254)
196 PRK08703 short chain dehydroge 99.2 2.3E-10 5E-15 102.9 14.3 115 25-144 5-146 (239)
197 PRK08085 gluconate 5-dehydroge 99.2 1.1E-10 2.4E-15 106.0 12.2 158 25-209 8-194 (254)
198 PRK06114 short chain dehydroge 99.2 1.6E-10 3.4E-15 105.0 13.1 159 26-209 8-196 (254)
199 PRK06172 short chain dehydroge 99.2 1E-10 2.2E-15 106.0 11.8 115 26-145 7-144 (253)
200 PRK09072 short chain dehydroge 99.2 1.2E-10 2.7E-15 106.2 12.2 115 26-145 5-139 (263)
201 PRK07576 short chain dehydroge 99.2 1.2E-10 2.5E-15 106.5 11.9 117 24-145 7-144 (264)
202 PRK07677 short chain dehydroge 99.2 8.6E-11 1.9E-15 106.6 11.0 115 26-145 1-138 (252)
203 PRK07041 short chain dehydroge 99.2 3E-10 6.5E-15 101.4 14.0 110 30-146 1-125 (230)
204 PRK06198 short chain dehydroge 99.2 2E-10 4.4E-15 104.5 13.1 159 24-209 4-193 (260)
205 PRK08945 putative oxoacyl-(acy 99.2 2.6E-10 5.6E-15 103.1 13.6 120 21-145 7-152 (247)
206 PRK06113 7-alpha-hydroxysteroi 99.2 1.6E-10 3.4E-15 105.0 12.1 116 25-145 10-146 (255)
207 PRK12747 short chain dehydroge 99.2 3.2E-10 6.8E-15 102.8 13.5 158 25-209 3-194 (252)
208 PRK07035 short chain dehydroge 99.2 1.8E-10 3.9E-15 104.4 11.9 117 24-145 6-145 (252)
209 PRK07109 short chain dehydroge 99.2 2.9E-10 6.2E-15 107.4 13.4 117 25-146 7-145 (334)
210 PRK07097 gluconate 5-dehydroge 99.2 1.7E-10 3.6E-15 105.5 11.5 158 25-209 9-195 (265)
211 PRK12481 2-deoxy-D-gluconate 3 99.2 2.1E-10 4.6E-15 104.0 12.0 117 25-146 7-144 (251)
212 TIGR02632 RhaD_aldol-ADH rhamn 99.2 4.4E-10 9.6E-15 115.5 15.5 156 25-207 413-600 (676)
213 PRK05867 short chain dehydroge 99.2 3E-10 6.5E-15 103.1 12.8 103 25-132 8-130 (253)
214 PRK12938 acetyacetyl-CoA reduc 99.2 2.2E-10 4.9E-15 103.4 12.0 115 26-145 3-140 (246)
215 PRK07069 short chain dehydroge 99.2 4.2E-10 9E-15 101.9 13.5 112 28-146 1-139 (251)
216 PRK07832 short chain dehydroge 99.2 3.8E-10 8.2E-15 103.6 13.1 114 27-145 1-138 (272)
217 PRK08589 short chain dehydroge 99.2 4.4E-10 9.5E-15 103.2 13.1 157 25-208 5-189 (272)
218 PRK08277 D-mannonate oxidoredu 99.2 3.1E-10 6.6E-15 104.5 12.1 157 26-209 10-210 (278)
219 PRK06483 dihydromonapterin red 99.2 2.3E-10 5E-15 102.7 10.9 103 25-132 1-118 (236)
220 TIGR02415 23BDH acetoin reduct 99.2 2.6E-10 5.7E-15 103.4 11.4 114 27-145 1-137 (254)
221 PRK08993 2-deoxy-D-gluconate 3 99.2 5E-10 1.1E-14 101.6 13.2 117 25-146 9-146 (253)
222 PRK08339 short chain dehydroge 99.1 6.2E-10 1.4E-14 101.6 13.3 156 25-208 7-192 (263)
223 PRK07062 short chain dehydroge 99.1 7E-10 1.5E-14 101.3 13.6 117 24-145 6-146 (265)
224 PRK06924 short chain dehydroge 99.1 4.4E-10 9.6E-15 101.7 12.0 114 27-145 2-141 (251)
225 TIGR01289 LPOR light-dependent 99.1 6.9E-10 1.5E-14 104.0 13.6 121 24-149 1-147 (314)
226 smart00822 PKS_KR This enzymat 99.1 5.9E-10 1.3E-14 94.8 12.0 112 27-145 1-136 (180)
227 PRK05855 short chain dehydroge 99.1 5.3E-10 1.2E-14 113.8 13.7 155 26-208 315-500 (582)
228 PRK06139 short chain dehydroge 99.1 5.2E-10 1.1E-14 105.3 12.4 116 25-145 6-143 (330)
229 TIGR03325 BphB_TodD cis-2,3-di 99.1 2.9E-10 6.4E-15 103.7 10.0 103 26-133 5-129 (262)
230 PRK07201 short chain dehydroge 99.1 5.2E-10 1.1E-14 115.7 13.0 159 23-208 368-557 (657)
231 PRK08936 glucose-1-dehydrogena 99.1 1.4E-09 3.1E-14 99.0 14.2 116 24-145 5-145 (261)
232 PRK05884 short chain dehydroge 99.1 5.5E-10 1.2E-14 99.4 11.1 112 28-144 2-130 (223)
233 PRK05872 short chain dehydroge 99.1 8.2E-10 1.8E-14 102.6 12.5 116 25-145 8-143 (296)
234 PRK06940 short chain dehydroge 99.1 7E-10 1.5E-14 102.0 11.5 101 25-133 1-114 (275)
235 PRK07831 short chain dehydroge 99.1 1.6E-09 3.4E-14 98.8 13.7 159 24-209 15-206 (262)
236 PRK07578 short chain dehydroge 99.1 1.2E-09 2.5E-14 95.4 12.1 102 27-144 1-111 (199)
237 KOG1203 Predicted dehydrogenas 99.1 1.9E-09 4.2E-14 101.3 13.7 159 25-208 78-248 (411)
238 PRK06484 short chain dehydroge 99.1 1E-09 2.2E-14 110.3 12.5 159 23-208 266-449 (520)
239 PRK06200 2,3-dihydroxy-2,3-dih 99.1 6.8E-10 1.5E-14 101.3 9.9 116 25-145 5-143 (263)
240 PRK12367 short chain dehydroge 99.1 7.6E-10 1.6E-14 99.8 9.6 104 25-133 13-121 (245)
241 TIGR01831 fabG_rel 3-oxoacyl-( 99.0 9.6E-10 2.1E-14 98.8 9.6 112 29-145 1-136 (239)
242 KOG4039 Serine/threonine kinas 99.0 2.1E-09 4.5E-14 87.7 9.9 151 27-212 19-175 (238)
243 PRK08416 7-alpha-hydroxysteroi 99.0 3.7E-09 8.1E-14 96.3 12.9 116 25-145 7-152 (260)
244 PRK07424 bifunctional sterol d 99.0 1.1E-09 2.4E-14 104.9 9.7 103 25-132 177-286 (406)
245 PRK07792 fabG 3-ketoacyl-(acyl 99.0 2.7E-09 5.9E-14 99.6 12.0 103 25-132 11-133 (306)
246 PRK09009 C factor cell-cell si 99.0 1.3E-08 2.9E-13 91.1 16.0 114 27-144 1-131 (235)
247 PRK08261 fabG 3-ketoacyl-(acyl 99.0 3.3E-09 7.2E-14 104.5 12.7 118 23-145 207-343 (450)
248 TIGR02685 pter_reduc_Leis pter 99.0 5.9E-09 1.3E-13 95.4 11.9 101 27-132 2-139 (267)
249 PLN02780 ketoreductase/ oxidor 99.0 7.3E-09 1.6E-13 97.2 12.7 116 25-145 52-193 (320)
250 PRK08340 glucose-1-dehydrogena 99.0 7.2E-09 1.6E-13 94.4 12.3 113 27-145 1-138 (259)
251 KOG4288 Predicted oxidoreducta 98.9 4.8E-09 1E-13 89.4 9.1 157 20-209 46-205 (283)
252 PRK06079 enoyl-(acyl carrier p 98.9 1.2E-08 2.7E-13 92.4 12.1 115 25-144 6-143 (252)
253 PRK06125 short chain dehydroge 98.9 2.8E-08 6.1E-13 90.4 14.5 114 26-144 7-139 (259)
254 PRK06484 short chain dehydroge 98.9 1.4E-08 3E-13 102.1 12.2 116 25-145 4-141 (520)
255 PRK12859 3-ketoacyl-(acyl-carr 98.9 3.5E-08 7.7E-13 89.6 13.3 117 24-145 4-155 (256)
256 KOG1205 Predicted dehydrogenas 98.8 8E-08 1.7E-12 86.6 14.4 118 25-147 11-152 (282)
257 PRK07791 short chain dehydroge 98.8 2.6E-08 5.7E-13 92.0 11.5 103 24-131 4-135 (286)
258 PRK07889 enoyl-(acyl carrier p 98.8 6.8E-08 1.5E-12 87.8 13.8 104 25-133 6-134 (256)
259 PRK08594 enoyl-(acyl carrier p 98.8 1.2E-07 2.5E-12 86.3 15.0 116 25-145 6-148 (257)
260 PRK07533 enoyl-(acyl carrier p 98.8 5.7E-08 1.2E-12 88.4 12.3 115 25-144 9-148 (258)
261 PRK06505 enoyl-(acyl carrier p 98.8 5.4E-08 1.2E-12 89.2 11.9 156 25-208 6-194 (271)
262 PRK07370 enoyl-(acyl carrier p 98.8 7.5E-08 1.6E-12 87.6 12.8 116 25-145 5-148 (258)
263 PRK08159 enoyl-(acyl carrier p 98.8 1.1E-07 2.3E-12 87.3 13.2 115 25-144 9-148 (272)
264 PRK07984 enoyl-(acyl carrier p 98.8 1.4E-07 2.9E-12 86.1 13.2 115 25-144 5-145 (262)
265 PRK08690 enoyl-(acyl carrier p 98.8 1.3E-07 2.7E-12 86.3 12.7 115 25-144 5-146 (261)
266 PRK06997 enoyl-(acyl carrier p 98.7 1.5E-07 3.3E-12 85.7 13.1 115 25-144 5-145 (260)
267 PRK08303 short chain dehydroge 98.7 3.4E-07 7.4E-12 85.4 15.0 116 25-145 7-159 (305)
268 PRK08415 enoyl-(acyl carrier p 98.7 1.1E-07 2.4E-12 87.3 11.6 114 26-145 5-144 (274)
269 TIGR01500 sepiapter_red sepiap 98.7 1E-07 2.2E-12 86.6 11.0 117 28-145 2-151 (256)
270 PRK08862 short chain dehydroge 98.7 3.8E-07 8.1E-12 81.3 13.6 101 25-130 4-126 (227)
271 cd01336 MDH_cytoplasmic_cytoso 98.7 1.3E-07 2.8E-12 88.5 10.7 115 27-141 3-126 (325)
272 PRK06603 enoyl-(acyl carrier p 98.7 3.2E-07 7E-12 83.5 13.2 116 25-145 7-147 (260)
273 PRK05599 hypothetical protein; 98.7 4.5E-07 9.8E-12 81.9 13.9 113 27-145 1-137 (246)
274 PTZ00325 malate dehydrogenase; 98.6 2.3E-07 5E-12 86.2 10.9 120 21-145 3-125 (321)
275 PF00106 adh_short: short chai 98.6 1.6E-07 3.5E-12 79.3 8.7 112 27-145 1-135 (167)
276 KOG1208 Dehydrogenases with di 98.6 7.4E-07 1.6E-11 82.5 13.4 119 22-147 31-173 (314)
277 KOG1200 Mitochondrial/plastidi 98.6 1.2E-06 2.6E-11 73.0 13.1 166 23-208 11-199 (256)
278 PRK08309 short chain dehydroge 98.6 7.9E-08 1.7E-12 81.7 6.1 89 27-134 1-99 (177)
279 PF08659 KR: KR domain; Inter 98.6 3E-07 6.5E-12 78.9 9.6 112 28-145 2-136 (181)
280 PLN00015 protochlorophyllide r 98.6 2.1E-07 4.5E-12 87.0 9.0 115 30-149 1-141 (308)
281 KOG1209 1-Acyl dihydroxyaceton 98.5 4.5E-07 9.8E-12 76.6 8.7 102 26-132 7-125 (289)
282 KOG4169 15-hydroxyprostaglandi 98.5 1.4E-06 3.1E-11 74.5 11.8 115 25-144 4-136 (261)
283 KOG1610 Corticosteroid 11-beta 98.5 1.7E-06 3.8E-11 77.9 12.9 162 23-208 26-212 (322)
284 COG3967 DltE Short-chain dehyd 98.5 1.9E-06 4.1E-11 72.7 11.4 163 25-208 4-187 (245)
285 PRK12428 3-alpha-hydroxysteroi 98.5 5E-07 1.1E-11 81.3 8.4 97 42-149 1-101 (241)
286 KOG1201 Hydroxysteroid 17-beta 98.4 1.9E-06 4.2E-11 77.2 10.8 120 23-147 35-175 (300)
287 KOG1210 Predicted 3-ketosphing 98.4 3.9E-06 8.4E-11 75.5 12.5 159 27-208 34-220 (331)
288 KOG1611 Predicted short chain- 98.4 5.3E-06 1.2E-10 71.1 12.6 100 27-130 4-127 (249)
289 PLN00106 malate dehydrogenase 98.4 1.6E-06 3.5E-11 80.6 10.3 107 27-136 19-128 (323)
290 KOG0725 Reductases with broad 98.4 1E-05 2.2E-10 73.7 14.4 160 23-209 5-200 (270)
291 PRK09620 hypothetical protein; 98.3 9.8E-07 2.1E-11 78.1 6.0 74 26-104 3-97 (229)
292 TIGR02813 omega_3_PfaA polyket 98.3 1.4E-05 3.1E-10 92.0 15.7 116 24-145 1995-2176(2582)
293 PLN02730 enoyl-[acyl-carrier-p 98.3 2.1E-05 4.6E-10 73.0 14.1 117 23-145 6-179 (303)
294 PRK06732 phosphopantothenate-- 98.2 4.7E-06 1E-10 74.0 8.0 68 33-105 23-92 (229)
295 COG1748 LYS9 Saccharopine dehy 98.2 2.8E-06 6.2E-11 80.1 6.8 86 27-134 2-92 (389)
296 cd00704 MDH Malate dehydrogena 98.2 1.1E-05 2.4E-10 75.4 10.6 109 28-141 2-124 (323)
297 PRK06720 hypothetical protein; 98.2 6E-06 1.3E-10 69.8 7.7 76 25-105 15-104 (169)
298 COG1028 FabG Dehydrogenases wi 98.2 1.8E-05 3.8E-10 71.5 11.4 116 24-145 3-143 (251)
299 PRK05086 malate dehydrogenase; 98.1 3.1E-05 6.8E-10 72.1 10.5 111 27-143 1-116 (312)
300 PRK06300 enoyl-(acyl carrier p 98.0 0.00014 3.1E-09 67.4 14.5 36 23-63 5-42 (299)
301 TIGR01758 MDH_euk_cyt malate d 98.0 3E-05 6.6E-10 72.5 9.6 108 28-140 1-122 (324)
302 TIGR00715 precor6x_red precorr 98.0 3.9E-05 8.4E-10 69.1 9.0 90 27-135 1-93 (256)
303 cd01338 MDH_choloroplast_like 97.9 3.4E-05 7.4E-10 72.1 7.1 160 26-210 2-185 (322)
304 PF13561 adh_short_C2: Enoyl-( 97.8 6.8E-05 1.5E-09 67.4 7.1 148 33-208 1-183 (241)
305 cd01078 NAD_bind_H4MPT_DH NADP 97.7 5.4E-05 1.2E-09 65.6 5.3 72 25-101 27-104 (194)
306 KOG1207 Diacetyl reductase/L-x 97.7 6.4E-05 1.4E-09 61.7 5.1 102 25-131 6-120 (245)
307 KOG1014 17 beta-hydroxysteroid 97.7 9.3E-05 2E-09 66.8 6.7 158 22-208 45-235 (312)
308 PF13950 Epimerase_Csub: UDP-g 97.7 3.3E-05 7.2E-10 53.1 2.8 34 360-393 24-58 (62)
309 PRK14982 acyl-ACP reductase; P 97.6 2.2E-05 4.7E-10 73.3 2.0 72 24-104 153-225 (340)
310 PRK05579 bifunctional phosphop 97.6 0.00015 3.2E-09 69.7 7.4 73 23-104 185-277 (399)
311 PF03435 Saccharop_dh: Sacchar 97.5 0.00013 2.8E-09 70.5 5.6 70 29-103 1-76 (386)
312 PF00056 Ldh_1_N: lactate/mala 97.4 0.00012 2.6E-09 59.9 3.5 105 27-141 1-116 (141)
313 PRK05442 malate dehydrogenase; 97.4 0.0016 3.5E-08 60.9 10.7 104 26-134 4-120 (326)
314 cd05294 LDH-like_MDH_nadp A la 97.4 0.00062 1.3E-08 63.4 7.9 103 27-138 1-116 (309)
315 TIGR01759 MalateDH-SF1 malate 97.3 0.0014 3.1E-08 61.2 9.3 108 27-135 4-120 (323)
316 KOG2733 Uncharacterized membra 97.3 0.00039 8.5E-09 63.7 4.9 77 28-105 7-94 (423)
317 KOG1199 Short-chain alcohol de 97.2 0.00021 4.5E-09 58.6 2.2 100 25-129 8-130 (260)
318 cd01337 MDH_glyoxysomal_mitoch 97.2 0.0022 4.8E-08 59.5 9.0 108 27-141 1-115 (310)
319 TIGR01772 MDH_euk_gproteo mala 97.1 0.003 6.4E-08 58.8 8.9 108 28-140 1-113 (312)
320 PRK00066 ldh L-lactate dehydro 97.0 0.0078 1.7E-07 56.2 11.6 101 26-139 6-118 (315)
321 PRK13656 trans-2-enoyl-CoA red 97.0 0.0014 3E-08 62.0 6.2 73 26-104 41-141 (398)
322 PF04127 DFP: DNA / pantothena 97.0 0.0012 2.6E-08 56.4 4.8 65 34-105 27-93 (185)
323 PLN00112 malate dehydrogenase 96.9 0.0063 1.4E-07 59.0 9.8 109 26-141 100-224 (444)
324 TIGR00521 coaBC_dfp phosphopan 96.9 0.0027 5.8E-08 60.9 7.1 74 23-105 182-276 (390)
325 PLN02968 Probable N-acetyl-gam 96.9 0.0011 2.4E-08 63.4 4.4 101 25-149 37-139 (381)
326 cd05291 HicDH_like L-2-hydroxy 96.8 0.012 2.6E-07 54.9 10.8 99 27-138 1-112 (306)
327 COG3268 Uncharacterized conser 96.7 0.0018 3.9E-08 59.0 4.2 78 22-104 2-81 (382)
328 TIGR02114 coaB_strep phosphopa 96.7 0.0022 4.9E-08 56.9 4.7 62 33-104 22-90 (227)
329 KOG1204 Predicted dehydrogenas 96.6 0.0068 1.5E-07 52.5 6.5 113 24-145 4-145 (253)
330 cd05295 MDH_like Malate dehydr 96.6 0.025 5.3E-07 55.0 11.1 106 23-135 120-240 (452)
331 PRK00436 argC N-acetyl-gamma-g 96.6 0.0092 2E-07 56.5 8.1 36 25-64 1-36 (343)
332 PLN02602 lactate dehydrogenase 96.5 0.031 6.7E-07 52.9 11.2 105 27-141 38-152 (350)
333 COG0039 Mdh Malate/lactate deh 96.5 0.014 3.1E-07 53.7 8.6 105 27-141 1-116 (313)
334 COG0569 TrkA K+ transport syst 96.5 0.0034 7.3E-08 55.7 4.2 68 27-100 1-72 (225)
335 PRK12548 shikimate 5-dehydroge 96.4 0.0075 1.6E-07 55.7 6.6 71 25-101 125-206 (289)
336 TIGR01757 Malate-DH_plant mala 96.4 0.02 4.4E-07 54.6 9.4 102 26-134 44-160 (387)
337 cd05290 LDH_3 A subgroup of L- 96.4 0.039 8.5E-07 51.3 10.9 100 28-138 1-114 (307)
338 PRK04148 hypothetical protein; 96.4 0.0045 9.8E-08 49.5 4.0 67 26-101 17-84 (134)
339 PRK09496 trkA potassium transp 96.3 0.0043 9.3E-08 61.3 4.6 69 27-101 1-72 (453)
340 cd05293 LDH_1 A subgroup of L- 96.3 0.041 9E-07 51.3 10.7 104 27-141 4-118 (312)
341 KOG1478 3-keto sterol reductas 96.2 0.0089 1.9E-07 52.5 5.3 79 25-103 2-98 (341)
342 PF01113 DapB_N: Dihydrodipico 96.2 0.012 2.7E-07 46.8 5.6 68 28-101 2-74 (124)
343 PF01118 Semialdhyde_dh: Semia 96.1 0.0063 1.4E-07 48.3 3.8 34 28-65 1-35 (121)
344 PRK00048 dihydrodipicolinate r 96.1 0.02 4.4E-07 51.9 7.4 65 27-101 2-67 (257)
345 PRK14874 aspartate-semialdehyd 96.1 0.013 2.7E-07 55.4 6.2 65 27-101 2-70 (334)
346 cd00650 LDH_MDH_like NAD-depen 96.1 0.014 2.9E-07 53.2 6.1 108 29-141 1-117 (263)
347 PLN02819 lysine-ketoglutarate 96.1 0.0062 1.3E-07 65.0 4.3 75 26-101 569-655 (1042)
348 KOG1494 NAD-dependent malate d 96.1 0.039 8.5E-07 49.2 8.5 108 26-136 28-138 (345)
349 PRK08057 cobalt-precorrin-6x r 96.0 0.051 1.1E-06 48.7 9.5 91 25-135 1-93 (248)
350 PTZ00117 malate dehydrogenase; 95.8 0.027 5.9E-07 52.8 7.1 101 26-137 5-116 (319)
351 cd05292 LDH_2 A subgroup of L- 95.7 0.091 2E-06 49.0 10.0 97 28-137 2-110 (308)
352 PRK06223 malate dehydrogenase; 95.6 0.032 6.9E-07 52.1 6.6 103 27-136 3-112 (307)
353 PRK08664 aspartate-semialdehyd 95.6 0.018 3.9E-07 54.8 5.0 37 25-65 2-38 (349)
354 KOG1496 Malate dehydrogenase [ 95.5 0.023 4.9E-07 49.5 4.7 111 27-141 5-128 (332)
355 TIGR01763 MalateDH_bact malate 95.4 0.044 9.5E-07 51.0 7.0 104 27-137 2-112 (305)
356 PRK10669 putative cation:proto 95.2 0.015 3.3E-07 59.0 3.2 68 23-96 414-483 (558)
357 PRK11199 tyrA bifunctional cho 95.1 0.043 9.3E-07 52.7 5.9 35 25-64 97-131 (374)
358 PTZ00082 L-lactate dehydrogena 95.1 0.24 5.1E-06 46.5 10.6 98 27-137 7-122 (321)
359 TIGR01915 npdG NADPH-dependent 95.0 0.028 6.1E-07 49.7 4.1 35 27-66 1-35 (219)
360 cd00300 LDH_like L-lactate deh 95.0 0.04 8.6E-07 51.2 5.3 101 29-141 1-113 (300)
361 COG0002 ArgC Acetylglutamate s 94.9 0.059 1.3E-06 50.0 6.0 36 25-64 1-36 (349)
362 PRK15469 ghrA bifunctional gly 94.8 0.11 2.3E-06 48.6 7.4 64 23-100 133-196 (312)
363 PF02254 TrkA_N: TrkA-N domain 94.7 0.013 2.7E-07 46.0 1.0 64 29-98 1-66 (116)
364 cd01080 NAD_bind_m-THF_DH_Cycl 94.7 0.092 2E-06 44.1 6.3 54 23-101 41-94 (168)
365 TIGR01296 asd_B aspartate-semi 94.7 0.046 9.9E-07 51.7 4.8 64 28-101 1-68 (339)
366 TIGR01771 L-LDH-NAD L-lactate 94.7 0.19 4.1E-06 46.6 8.7 99 31-140 1-110 (299)
367 PRK13982 bifunctional SbtC-lik 94.6 0.089 1.9E-06 51.6 6.8 74 22-104 252-344 (475)
368 PRK09496 trkA potassium transp 94.6 0.04 8.7E-07 54.4 4.6 69 25-99 230-302 (453)
369 TIGR01850 argC N-acetyl-gamma- 94.6 0.045 9.7E-07 51.9 4.6 34 27-64 1-35 (346)
370 PRK14106 murD UDP-N-acetylmura 94.5 0.033 7.1E-07 55.0 3.6 67 25-102 4-76 (450)
371 PRK03659 glutathione-regulated 94.4 0.074 1.6E-06 54.4 5.9 70 25-100 399-470 (601)
372 PRK09288 purT phosphoribosylgl 94.3 0.17 3.7E-06 49.0 7.9 68 25-99 11-80 (395)
373 PRK07688 thiamine/molybdopteri 94.2 0.21 4.6E-06 47.1 8.1 36 24-65 22-58 (339)
374 KOG0172 Lysine-ketoglutarate r 94.2 0.056 1.2E-06 50.6 4.0 72 25-101 1-75 (445)
375 PLN02383 aspartate semialdehyd 94.1 0.13 2.7E-06 48.7 6.4 23 26-48 7-29 (344)
376 COG2085 Predicted dinucleotide 94.1 0.061 1.3E-06 46.4 3.8 35 27-67 2-36 (211)
377 PRK05671 aspartate-semialdehyd 94.0 0.058 1.3E-06 50.8 3.8 22 27-48 5-26 (336)
378 PRK06019 phosphoribosylaminoim 93.8 0.18 4E-06 48.4 7.1 65 27-98 3-67 (372)
379 COG0623 FabI Enoyl-[acyl-carri 93.8 0.66 1.4E-05 40.6 9.5 105 24-133 4-133 (259)
380 PRK10537 voltage-gated potassi 93.6 0.1 2.2E-06 50.3 4.8 67 26-99 240-307 (393)
381 KOG1202 Animal-type fatty acid 93.5 0.11 2.4E-06 55.2 5.1 114 26-145 1768-1905(2376)
382 PRK03562 glutathione-regulated 93.5 0.12 2.6E-06 53.1 5.4 70 25-100 399-470 (621)
383 PRK11863 N-acetyl-gamma-glutam 93.3 0.15 3.2E-06 47.4 5.2 36 25-64 1-36 (313)
384 PLN02928 oxidoreductase family 93.3 0.17 3.6E-06 48.0 5.8 70 23-98 156-230 (347)
385 TIGR02853 spore_dpaA dipicolin 93.3 0.055 1.2E-06 49.8 2.4 66 25-101 150-216 (287)
386 cd01339 LDH-like_MDH L-lactate 93.2 0.72 1.6E-05 42.8 9.8 96 29-136 1-108 (300)
387 PRK14619 NAD(P)H-dependent gly 93.1 0.17 3.7E-06 47.2 5.5 34 26-65 4-37 (308)
388 COG0289 DapB Dihydrodipicolina 93.1 0.45 9.9E-06 42.5 7.6 37 26-66 2-39 (266)
389 PF00899 ThiF: ThiF family; I 93.1 0.35 7.6E-06 39.0 6.6 33 26-64 2-35 (135)
390 TIGR01142 purT phosphoribosylg 92.9 0.27 6E-06 47.3 6.8 65 28-99 1-67 (380)
391 PRK08410 2-hydroxyacid dehydro 92.9 0.28 6.1E-06 45.8 6.6 62 23-101 142-204 (311)
392 PRK08306 dipicolinate synthase 92.9 0.073 1.6E-06 49.3 2.7 66 25-101 151-217 (296)
393 PRK14194 bifunctional 5,10-met 92.8 0.21 4.6E-06 45.9 5.4 54 24-102 157-210 (301)
394 PRK06849 hypothetical protein; 92.8 0.15 3.2E-06 49.3 4.7 36 25-65 3-38 (389)
395 PRK12475 thiamine/molybdopteri 92.7 0.9 1.9E-05 42.9 9.6 35 25-65 23-58 (338)
396 PF00070 Pyr_redox: Pyridine n 92.7 0.18 3.9E-06 36.5 3.9 33 28-66 1-33 (80)
397 PF02571 CbiJ: Precorrin-6x re 92.6 0.63 1.4E-05 41.8 8.1 89 27-135 1-94 (249)
398 PLN02948 phosphoribosylaminoim 92.5 0.41 9E-06 48.7 7.6 70 22-98 18-87 (577)
399 PRK06598 aspartate-semialdehyd 92.5 0.29 6.4E-06 46.4 6.1 34 27-64 2-38 (369)
400 PRK14175 bifunctional 5,10-met 92.5 0.27 5.7E-06 45.0 5.6 54 24-102 156-209 (286)
401 PRK13243 glyoxylate reductase; 92.4 0.12 2.7E-06 48.6 3.5 65 23-101 147-212 (333)
402 TIGR03693 ocin_ThiF_like putat 92.4 0.59 1.3E-05 46.9 8.2 105 13-141 121-238 (637)
403 cd01485 E1-1_like Ubiquitin ac 92.4 0.76 1.6E-05 39.8 8.1 37 23-65 16-53 (198)
404 PRK14192 bifunctional 5,10-met 92.2 0.34 7.3E-06 44.5 6.0 55 23-102 156-210 (283)
405 TIGR01851 argC_other N-acetyl- 92.2 0.27 5.8E-06 45.5 5.2 32 28-63 3-34 (310)
406 TIGR00978 asd_EA aspartate-sem 92.1 0.19 4.2E-06 47.6 4.5 33 27-63 1-33 (341)
407 cd01075 NAD_bind_Leu_Phe_Val_D 92.1 0.21 4.7E-06 43.3 4.4 37 23-65 25-61 (200)
408 PRK06436 glycerate dehydrogena 92.1 0.39 8.6E-06 44.6 6.3 59 23-98 119-177 (303)
409 PF02826 2-Hacid_dh_C: D-isome 91.9 0.28 6.1E-06 41.7 4.8 39 22-66 32-70 (178)
410 PRK07877 hypothetical protein; 91.9 0.31 6.7E-06 50.6 5.9 45 14-65 95-141 (722)
411 COG1052 LdhA Lactate dehydroge 91.9 0.35 7.6E-06 45.3 5.7 65 23-101 143-208 (324)
412 PF02670 DXP_reductoisom: 1-de 91.7 0.22 4.8E-06 39.6 3.7 32 29-63 1-32 (129)
413 PRK06129 3-hydroxyacyl-CoA deh 91.7 0.17 3.8E-06 47.1 3.6 33 27-65 3-35 (308)
414 PRK08229 2-dehydropantoate 2-r 91.7 0.2 4.2E-06 47.5 4.0 35 25-65 1-35 (341)
415 PRK08655 prephenate dehydrogen 91.7 0.2 4.3E-06 49.2 4.1 35 27-66 1-35 (437)
416 COG0111 SerA Phosphoglycerate 91.6 0.31 6.8E-06 45.6 5.1 66 23-101 139-205 (324)
417 PRK07574 formate dehydrogenase 91.5 0.21 4.5E-06 48.0 3.9 62 24-98 190-252 (385)
418 PRK15438 erythronate-4-phospha 91.4 0.3 6.5E-06 46.7 4.8 61 24-101 114-175 (378)
419 PRK06487 glycerate dehydrogena 91.3 0.36 7.9E-06 45.2 5.3 60 23-101 145-205 (317)
420 TIGR03026 NDP-sugDHase nucleot 91.3 0.35 7.6E-06 47.1 5.3 33 28-66 2-34 (411)
421 TIGR02356 adenyl_thiF thiazole 91.3 0.69 1.5E-05 40.2 6.7 38 22-65 17-55 (202)
422 TIGR01161 purK phosphoribosyla 91.1 0.5 1.1E-05 44.9 6.1 63 28-97 1-63 (352)
423 PRK12480 D-lactate dehydrogena 91.0 0.27 5.9E-06 46.3 4.1 59 24-98 144-202 (330)
424 PF03721 UDPG_MGDP_dh_N: UDP-g 90.9 0.22 4.9E-06 42.6 3.2 33 27-65 1-33 (185)
425 PRK14188 bifunctional 5,10-met 90.8 0.48 1E-05 43.7 5.4 35 23-62 155-189 (296)
426 COG0287 TyrA Prephenate dehydr 90.7 0.76 1.6E-05 42.1 6.6 35 26-66 3-37 (279)
427 PRK00257 erythronate-4-phospha 90.6 0.4 8.7E-06 45.9 4.9 62 23-101 113-175 (381)
428 cd00757 ThiF_MoeB_HesA_family 90.5 0.72 1.6E-05 40.9 6.2 36 23-64 18-54 (228)
429 COG0240 GpsA Glycerol-3-phosph 90.5 0.74 1.6E-05 42.8 6.3 67 27-99 2-76 (329)
430 KOG4288 Predicted oxidoreducta 90.5 0.15 3.3E-06 44.4 1.7 36 27-67 3-38 (283)
431 PF01488 Shikimate_DH: Shikima 90.2 0.37 7.9E-06 38.9 3.7 68 23-101 9-82 (135)
432 cd01492 Aos1_SUMO Ubiquitin ac 90.2 1.2 2.7E-05 38.5 7.3 36 24-65 19-55 (197)
433 PRK06932 glycerate dehydrogena 90.2 0.51 1.1E-05 44.1 5.2 61 23-101 144-205 (314)
434 PRK06719 precorrin-2 dehydroge 90.2 0.49 1.1E-05 39.3 4.5 33 25-63 12-44 (157)
435 PRK11790 D-3-phosphoglycerate 90.2 0.39 8.4E-06 46.7 4.5 63 23-101 148-211 (409)
436 PRK08040 putative semialdehyde 90.0 0.62 1.4E-05 43.8 5.5 38 25-64 3-40 (336)
437 PRK06249 2-dehydropantoate 2-r 89.9 0.44 9.4E-06 44.6 4.5 34 26-65 5-38 (313)
438 PRK13581 D-3-phosphoglycerate 89.8 0.49 1.1E-05 47.6 5.0 64 24-101 138-202 (526)
439 cd01065 NAD_bind_Shikimate_DH 89.7 0.47 1E-05 39.0 4.1 36 25-66 18-54 (155)
440 PLN02306 hydroxypyruvate reduc 89.5 0.46 1E-05 45.7 4.4 37 23-65 162-199 (386)
441 TIGR00518 alaDH alanine dehydr 89.5 0.41 8.9E-06 45.9 4.0 71 26-102 167-238 (370)
442 PRK06728 aspartate-semialdehyd 89.5 0.48 1E-05 44.7 4.4 33 27-63 6-41 (347)
443 KOG0023 Alcohol dehydrogenase, 89.5 0.55 1.2E-05 43.1 4.5 73 25-103 181-255 (360)
444 TIGR01035 hemA glutamyl-tRNA r 89.4 0.22 4.7E-06 48.6 2.1 67 24-101 178-247 (417)
445 KOG1198 Zinc-binding oxidoredu 89.4 0.47 1E-05 44.9 4.3 75 23-103 155-234 (347)
446 cd05212 NAD_bind_m-THF_DH_Cycl 89.4 0.98 2.1E-05 36.7 5.6 53 24-101 26-78 (140)
447 cd01079 NAD_bind_m-THF_DH NAD 89.3 1.3 2.7E-05 38.0 6.3 76 23-103 59-135 (197)
448 PRK06444 prephenate dehydrogen 89.3 0.42 9.2E-06 41.3 3.6 28 27-59 1-28 (197)
449 PLN03139 formate dehydrogenase 89.3 0.41 8.8E-06 46.0 3.8 64 23-99 196-260 (386)
450 PRK15409 bifunctional glyoxyla 89.2 0.71 1.5E-05 43.3 5.3 65 23-101 142-208 (323)
451 PRK00045 hemA glutamyl-tRNA re 89.2 0.23 4.9E-06 48.6 2.0 69 24-101 180-249 (423)
452 COG0027 PurT Formate-dependent 89.1 1.1 2.5E-05 40.9 6.2 70 21-97 7-76 (394)
453 PRK11064 wecC UDP-N-acetyl-D-m 89.1 0.44 9.4E-06 46.5 4.0 34 27-66 4-37 (415)
454 PRK08328 hypothetical protein; 89.1 2.6 5.7E-05 37.4 8.6 37 23-65 24-61 (231)
455 TIGR01327 PGDH D-3-phosphoglyc 89.0 0.52 1.1E-05 47.5 4.5 66 23-101 135-201 (525)
456 COG1179 Dinucleotide-utilizing 89.0 0.91 2E-05 40.1 5.3 68 24-97 28-98 (263)
457 PRK00258 aroE shikimate 5-dehy 88.9 0.58 1.2E-05 43.0 4.4 37 24-66 121-158 (278)
458 PLN02696 1-deoxy-D-xylulose-5- 88.9 0.76 1.6E-05 44.6 5.3 36 26-64 57-92 (454)
459 TIGR00243 Dxr 1-deoxy-D-xylulo 88.9 0.49 1.1E-05 44.9 3.9 35 27-64 2-36 (389)
460 COG0136 Asd Aspartate-semialde 88.8 0.62 1.4E-05 43.3 4.5 22 27-48 2-23 (334)
461 PLN02735 carbamoyl-phosphate s 88.8 1.2 2.7E-05 48.9 7.5 70 20-94 17-96 (1102)
462 PF03446 NAD_binding_2: NAD bi 88.7 0.48 1E-05 39.6 3.5 34 27-66 2-35 (163)
463 PF13241 NAD_binding_7: Putati 88.7 0.89 1.9E-05 34.7 4.7 35 25-65 6-40 (103)
464 cd08259 Zn_ADH5 Alcohol dehydr 88.6 0.58 1.3E-05 43.7 4.4 37 24-65 161-197 (332)
465 PRK06718 precorrin-2 dehydroge 88.6 0.62 1.4E-05 40.5 4.2 35 25-65 9-43 (202)
466 PRK11559 garR tartronate semia 88.6 0.49 1.1E-05 43.8 3.8 36 25-66 1-36 (296)
467 cd05213 NAD_bind_Glutamyl_tRNA 88.4 0.28 6E-06 45.9 2.0 68 24-101 176-245 (311)
468 PRK08605 D-lactate dehydrogena 88.3 0.6 1.3E-05 44.0 4.2 62 24-99 144-205 (332)
469 PF03807 F420_oxidored: NADP o 88.3 0.55 1.2E-05 35.1 3.3 33 28-66 1-37 (96)
470 COG0026 PurK Phosphoribosylami 88.2 1.7 3.8E-05 40.8 7.0 66 27-99 2-67 (375)
471 PRK05690 molybdopterin biosynt 88.1 2.4 5.2E-05 38.1 7.7 34 25-64 31-65 (245)
472 KOG4022 Dihydropteridine reduc 88.0 7 0.00015 32.3 9.4 34 27-65 4-37 (236)
473 PRK14179 bifunctional 5,10-met 88.0 0.92 2E-05 41.4 5.0 55 24-103 156-210 (284)
474 PF02882 THF_DHG_CYH_C: Tetrah 87.9 1.3 2.9E-05 36.8 5.5 53 24-101 34-86 (160)
475 PRK02472 murD UDP-N-acetylmura 87.7 0.58 1.3E-05 46.1 3.9 34 26-65 5-38 (447)
476 TIGR01470 cysG_Nterm siroheme 87.7 0.89 1.9E-05 39.6 4.6 53 25-83 8-63 (205)
477 PLN02775 Probable dihydrodipic 87.6 9 0.00019 35.1 11.0 41 20-65 5-46 (286)
478 PRK08644 thiamine biosynthesis 87.6 3 6.6E-05 36.5 7.9 35 25-65 27-62 (212)
479 PRK05597 molybdopterin biosynt 87.6 2 4.3E-05 40.9 7.3 37 23-65 25-62 (355)
480 KOG2013 SMT3/SUMO-activating c 87.4 1.4 3.1E-05 42.6 6.0 55 26-86 12-67 (603)
481 PF02737 3HCDH_N: 3-hydroxyacy 87.4 0.66 1.4E-05 39.5 3.5 33 28-66 1-33 (180)
482 cd01483 E1_enzyme_family Super 87.3 3.8 8.2E-05 33.2 8.0 32 28-65 1-33 (143)
483 PRK12409 D-amino acid dehydrog 87.3 0.73 1.6E-05 44.8 4.3 33 27-65 2-34 (410)
484 smart00859 Semialdhyde_dh Semi 87.2 0.87 1.9E-05 35.9 4.0 30 28-61 1-30 (122)
485 TIGR00872 gnd_rel 6-phosphoglu 87.2 0.44 9.6E-06 44.2 2.6 33 28-66 2-34 (298)
486 PRK05447 1-deoxy-D-xylulose 5- 86.9 0.82 1.8E-05 43.6 4.1 33 27-62 2-34 (385)
487 PRK11880 pyrroline-5-carboxyla 86.8 0.71 1.5E-05 42.0 3.7 36 25-66 1-39 (267)
488 PRK14189 bifunctional 5,10-met 86.8 1.4 3.1E-05 40.3 5.5 54 24-102 156-209 (285)
489 cd05191 NAD_bind_amino_acid_DH 86.7 1.3 2.8E-05 32.5 4.4 35 24-63 21-55 (86)
490 PRK06522 2-dehydropantoate 2-r 86.7 0.79 1.7E-05 42.5 4.0 33 27-65 1-33 (304)
491 cd08295 double_bond_reductase_ 86.6 0.9 2E-05 42.8 4.4 39 23-66 149-187 (338)
492 PRK08818 prephenate dehydrogen 86.6 0.86 1.9E-05 43.5 4.2 35 26-64 4-38 (370)
493 PF01210 NAD_Gly3P_dh_N: NAD-d 86.6 0.76 1.6E-05 38.1 3.4 32 28-65 1-32 (157)
494 PRK09260 3-hydroxybutyryl-CoA 86.5 0.68 1.5E-05 42.7 3.4 34 27-66 2-35 (288)
495 TIGR02355 moeB molybdopterin s 86.4 5.5 0.00012 35.6 9.0 35 25-65 23-58 (240)
496 PRK06545 prephenate dehydrogen 86.2 0.55 1.2E-05 44.8 2.7 34 27-66 1-34 (359)
497 cd05211 NAD_bind_Glu_Leu_Phe_V 86.1 1.1 2.4E-05 39.4 4.4 36 23-64 20-55 (217)
498 PLN00203 glutamyl-tRNA reducta 86.1 0.39 8.4E-06 48.0 1.6 69 24-101 264-336 (519)
499 PRK07417 arogenate dehydrogena 86.1 0.87 1.9E-05 41.8 3.9 33 28-66 2-34 (279)
500 PLN02712 arogenate dehydrogena 86.0 1.1 2.3E-05 46.5 4.9 52 7-65 346-402 (667)
No 1
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.5e-39 Score=280.28 Aligned_cols=306 Identities=16% Similarity=0.144 Sum_probs=227.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHcc--CCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQ--LTD 97 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~ 97 (397)
+++|||||+||||+++++++++.. ...+|+.++.-.-.. ....+++.++++|+.|.+.+..+++. .|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~---~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKH---PDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcC---CCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 479999999999999999999743 224688888743221 23457899999999999999999985 778
Q ss_pred eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961 98 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 175 (397)
Q Consensus 98 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~ 175 (397)
|+|+|+-+++..+ .|..+.++|+.||.+||+|+++.... .+|+.+|+..+|++- ...+..++|++|..|.
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l-------~~~~~~FtE~tp~~Ps 149 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDL-------GLDDDAFTETTPYNPS 149 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccc-------cCCCCCcccCCCCCCC
Confidence 9999988776554 78999999999999999999997432 567778776655542 2223468999999998
Q ss_pred CCcchh--HHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccH
Q 015961 176 PNFYYT--LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDA 253 (397)
Q Consensus 176 ~~~~y~--~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da 253 (397)
++|.-+ ..+++..++.+.+|++++|.|+++-|| |.....-+.++.+ +..-.|+++++.|++.+.++++++.|-
T Consensus 150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYG--PyqfpEKlIP~~I---~nal~g~~lpvYGdG~~iRDWl~VeDh 224 (340)
T COG1088 150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYG--PYQFPEKLIPLMI---INALLGKPLPVYGDGLQIRDWLYVEDH 224 (340)
T ss_pred CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcC--CCcCchhhhHHHH---HHHHcCCCCceecCCcceeeeEEeHhH
Confidence 884322 244444444488999999999999999 5433322222221 122248899999999999999999886
Q ss_pred HHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHH
Q 015961 254 DLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV 333 (397)
Q Consensus 254 ~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (397)
|+++ ++....+..|++|||+++...+..|+++.|.+.+|+..+... ++-.++.+
T Consensus 225 ---~~ai-~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~-------------~li~~V~D--------- 278 (340)
T COG1088 225 ---CRAI-DLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR-------------DLITFVED--------- 278 (340)
T ss_pred ---HHHH-HHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchh-------------hheEeccC---------
Confidence 5543 344555777999999999999999999999999998643210 11111111
Q ss_pred HHhCCCcccccccccchhhhhhhcCc-ccccchhhHH-HcCCCCccCCHHHHHHHHHHHhcCCC
Q 015961 334 RENQLQPTRLDEVGAWWFVDLVLTGE-AKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFKI 395 (397)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~~~~~ 395 (397)
. -..+ ++.+|.+|++ +|||.|+++.++||+++++||.++.+
T Consensus 279 -------R--------------pGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~ 321 (340)
T COG1088 279 -------R--------------PGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW 321 (340)
T ss_pred -------C--------------CCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence 0 0122 6778999975 79999999999999999999988754
No 2
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=7e-38 Score=274.35 Aligned_cols=296 Identities=17% Similarity=0.122 Sum_probs=216.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCC--ceEEEccCCCHHHHHHHHcc--CCCeeEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL--VEYVQCDVSDPEETQAKLSQ--LTDVTHIF 102 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~--v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a 102 (397)
++||||||+||||||.+.+|++ .|++|+++++-.......... ++++++|+.|.+.|.+.|+. ++.|+|+|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~-----~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLK-----TGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHH-----CCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 4799999999999999999999 899999999855432111122 68999999999999999976 55699999
Q ss_pred EecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961 103 YVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180 (397)
Q Consensus 103 ~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y 180 (397)
+...+..+ +|.++++.|+.||.+|+++|++++ +++++|.||+.+|+.+ ...|++|+.|..|..+|..
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g--v~~~vFSStAavYG~p---------~~~PI~E~~~~~p~NPYG~ 144 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG--VKKFIFSSTAAVYGEP---------TTSPISETSPLAPINPYGR 144 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhC--CCEEEEecchhhcCCC---------CCcccCCCCCCCCCCcchh
Confidence 98777655 899999999999999999999976 8999988877655532 3579999999888777333
Q ss_pred h---HHHHHHHHHhcCCCeeEEEEcCCceeeccCCC-------cchhHHHHHHHHHHhhhcCCCceecC------Ccccc
Q 015961 181 T---LEDILFEEVEKKEELSWSVHRPDTIFGFSPYS-------LMNLVGALCVYAAVCKHEGIPLRFPG------TKAAW 244 (397)
Q Consensus 181 ~---~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~g------~~~~~ 244 (397)
+ .|++|..+. +.+++++++||..++.|..|.. ..+...++....++.+ ...+.+.| ++...
T Consensus 145 sKlm~E~iL~d~~-~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~--r~~l~ifG~DY~T~DGT~i 221 (329)
T COG1087 145 SKLMSEEILRDAA-KANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGK--RDKLFIFGDDYDTKDGTCI 221 (329)
T ss_pred HHHHHHHHHHHHH-HhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcC--CceeEEeCCCCCCCCCCee
Confidence 3 377777776 7788999999999999986541 1233444433333222 11133333 23334
Q ss_pred ceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961 245 ECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM 322 (397)
Q Consensus 245 ~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (397)
++++|+.|. |.+.+.+... .....++||+++|..+|+.|+++.+.++.|.+.+.--.
T Consensus 222 RDYIHV~DL---A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~------------------ 280 (329)
T COG1087 222 RDYIHVDDL---ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIA------------------ 280 (329)
T ss_pred eeeeehhHH---HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeC------------------
Confidence 555555443 5555554432 22233699999999999999999999999976543100
Q ss_pred ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCcc-CCHHHHHHHHHHHh
Q 015961 323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVK 391 (397)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~e~~~~~~~~~~ 391 (397)
+. +.++ . ..++.|.+|||+ |||+|++ +++++++++.+|..
T Consensus 281 -----------------~R-----R~GD---p----a~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~ 322 (329)
T COG1087 281 -----------------PR-----RAGD---P----AILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ 322 (329)
T ss_pred -----------------CC-----CCCC---C----ceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence 00 1111 0 156789999985 7999999 99999999999987
No 3
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=100.00 E-value=1.6e-37 Score=294.94 Aligned_cols=301 Identities=16% Similarity=0.119 Sum_probs=211.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C---------CCCCCceEEEccCCCHHHHHHHHc
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W---------NADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~---------~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
+|+|||||||||||++|+++|++ +|++|++++|..... . ....+++++.+|+.|.+.+..+++
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~ 89 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLF-----LNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK 89 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence 37899999999999999999999 899999999864321 0 001357889999999999999999
Q ss_pred cCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p 171 (397)
++|.|+|+|+...... .++.+.+++|+.||.|++++|++.+ +++++++||..+|+.. .+.+..|+++
T Consensus 90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~v~~SS~~vyg~~---------~~~~~~e~~~ 158 (348)
T PRK15181 90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH--VSSFTYAASSSTYGDH---------PDLPKIEERI 158 (348)
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeechHhhCCC---------CCCCCCCCCC
Confidence 9999999998644322 3567789999999999999999863 7899988876655432 1345566666
Q ss_pred CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--c-hhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961 172 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--M-NLVGALCVYAAVCKHEGIPLRFPGTKAA 243 (397)
Q Consensus 172 ~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~ 243 (397)
..|... |+. |+++..+. ++++++++++||++|||++.... . .+...+.. .+. .+.++.+.|++.+
T Consensus 159 ~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~--~~~--~~~~i~~~g~g~~ 231 (348)
T PRK15181 159 GRPLSP--YAVTKYVNELYADVFA-RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWIL--SLL--KDEPIYINGDGST 231 (348)
T ss_pred CCCCCh--hhHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCcCCCCCCccccCHHHHHH--HHH--cCCCcEEeCCCCc
Confidence 555444 654 55555544 56789999999999999643211 1 12222211 111 2556677788887
Q ss_pred cceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHH
Q 015961 244 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF 321 (397)
Q Consensus 244 ~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (397)
.++++|+.|+ |.+++.++.... ..+++|||++++.+|++|+++.+.+.++........ ..+
T Consensus 232 ~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~---------~~~----- 294 (348)
T PRK15181 232 SRDFCYIENV---IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSR---------AEP----- 294 (348)
T ss_pred eEeeEEHHHH---HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccC---------CCc-----
Confidence 7777777776 677666554322 357899999999999999999999998743211000 000
Q ss_pred hccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 322 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
.+.+..... .....+|++|+++ +||+|+++++|+|+++++|++..
T Consensus 295 ---------------~~~~~~~~~------------~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 295 ---------------IYKDFRDGD------------VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred ---------------ccCCCCCCc------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 000000000 0134579999986 69999999999999999999765
No 4
>PLN02427 UDP-apiose/xylose synthase
Probab=100.00 E-value=2.8e-34 Score=276.73 Aligned_cols=325 Identities=14% Similarity=0.166 Sum_probs=207.4
Q ss_pred CccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC--C------CCCCCceEEEccCCCHHH
Q 015961 17 EEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--W------NADHLVEYVQCDVSDPEE 87 (397)
Q Consensus 17 ~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~--~------~~~~~v~~~~~Dl~d~~~ 87 (397)
+.+.++..+ |+|||||||||||++|+++|++ + |++|++++|+.... . ...++++++.+|+.|.+.
T Consensus 6 ~~~~~~~~~-~~VlVTGgtGfIGs~lv~~L~~-----~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~ 79 (386)
T PLN02427 6 DLDGKPIKP-LTICMIGAGGFIGSHLCEKLMT-----ETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSR 79 (386)
T ss_pred cCCCCcccC-cEEEEECCcchHHHHHHHHHHh-----cCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHH
Confidence 445566555 6899999999999999999998 5 69999999865321 0 012468999999999999
Q ss_pred HHHHHccCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 88 TQAKLSQLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 88 l~~~~~~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
+.++++++|.|+|+|+..... ..++.+.+..|+.++.+++++|++.+ ++|+++||..+|+... +...+.+.|
T Consensus 80 l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~vYg~~~---~~~~~e~~p 153 (386)
T PLN02427 80 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTI---GSFLPKDHP 153 (386)
T ss_pred HHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeeeeeCCCc---CCCCCcccc
Confidence 999999999999998754321 12455667889999999999998753 6788888877775421 100011222
Q ss_pred C---------CCCCCCC---C--CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC------cchhHHH
Q 015961 166 F---------TEDMPRL---D--APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS------LMNLVGA 220 (397)
Q Consensus 166 ~---------~E~~p~~---~--~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~------~~~~~~~ 220 (397)
. .|+.+.. + .+...|+. |+++..+. +..+++++++||++|||+.... .......
T Consensus 154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~ 232 (386)
T PLN02427 154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEG-AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 232 (386)
T ss_pred cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHH-hhcCCceEEecccceeCCCCCccccccccccccch
Confidence 2 2222111 1 11233664 45555443 5578999999999999964210 0001111
Q ss_pred -HHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC-CCCCceeccCC-CeeehHHHHHHHHHHhCC
Q 015961 221 -LCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNG-DVFKWKHLWKVLAEQFGI 297 (397)
Q Consensus 221 -~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~-~~g~~yni~~~-~~~s~~el~~~i~~~~g~ 297 (397)
+..++. ....+.++.+.|++.+.++++|+.|+ |++++.++.++. ..+++||++++ ..+|++|+++.+.+.+|.
T Consensus 233 ~i~~~~~-~~~~~~~~~~~g~g~~~r~~i~V~Dv---a~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 233 VLACFSN-NLLRREPLKLVDGGQSQRTFVYIKDA---IEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred HHHHHHH-HHhcCCCeEEECCCCceECcEeHHHH---HHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 111111 11135566666766666666666555 777777665543 45789999987 589999999999999985
Q ss_pred CCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCc
Q 015961 298 EDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGF 376 (397)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~ 376 (397)
........ ...+.. ...+... ..+ .+ ....+.|++|+++ +||+|+
T Consensus 309 ~~~~~~~~-------~~~~~~--------------------~~~~~~~-~~~--~~----~~~~~~d~~k~~~~lGw~p~ 354 (386)
T PLN02427 309 VSGEPALE-------EPTVDV--------------------SSKEFYG-EGY--DD----SDKRIPDMTIINKQLGWNPK 354 (386)
T ss_pred cccccccc-------cccccc--------------------CcccccC-ccc--cc----hhhccCCHHHHHHhcCCCcC
Confidence 32110000 000000 0000000 000 00 0145679999986 699999
Q ss_pred cCCHHHHHHHHHHHhc
Q 015961 377 RNSKNSFITWIDKVKG 392 (397)
Q Consensus 377 ~~~~e~~~~~~~~~~~ 392 (397)
++++++|+++++|++.
T Consensus 355 ~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 355 TSLWDLLESTLTYQHK 370 (386)
T ss_pred ccHHHHHHHHHHHHHH
Confidence 9999999999999864
No 5
>PLN02572 UDP-sulfoquinovose synthase
Probab=100.00 E-value=5.6e-34 Score=277.38 Aligned_cols=306 Identities=18% Similarity=0.105 Sum_probs=201.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C---------------CCCCCceEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W---------------NADHLVEYV 78 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------------~~~~~v~~~ 78 (397)
..++|+|||||||||||++|+++|++ +|++|++++|..... . ....+++++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~-----~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v 118 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSK-----RGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY 118 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence 34568999999999999999999999 899999987532110 0 001258899
Q ss_pred EccCCCHHHHHHHHcc--CCCeeEEEEecccCCC--c---HHHHHHhHHHHHHHHHHHHcccCCCcc-eEEEecCCcccc
Q 015961 79 QCDVSDPEETQAKLSQ--LTDVTHIFYVTWTNRS--T---EAENCKINGSMFRNVLRAVIPNAPNLR-HVCLQTGTKHYL 150 (397)
Q Consensus 79 ~~Dl~d~~~l~~~~~~--~~~V~h~a~~~~~~~~--~---~~~~~~~nv~gt~~ll~a~~~~~~~~~-~~~~~s~~~~y~ 150 (397)
.+|++|.+.+..++++ +|.|+|+|+....... + ....+++|+.|+.|++++|++.+ ++ +++++||..+|+
T Consensus 119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--v~~~~V~~SS~~vYG 196 (442)
T PLN02572 119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--PDCHLVKLGTMGEYG 196 (442)
T ss_pred ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--CCccEEEEecceecC
Confidence 9999999999998885 7889999865332211 2 23456899999999999999864 43 788888766665
Q ss_pred ccccccCCCCCCCCCCC------CCC---CCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--
Q 015961 151 GPFEAFGKIKPYDPPFT------EDM---PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-- 214 (397)
Q Consensus 151 ss~~~~g~~~~~~~~~~------E~~---p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-- 214 (397)
.+. .+. .+.++. |++ |..|.. .|+. |.++..+. +++|++++++||++|||++....
T Consensus 197 ~~~---~~~--~E~~i~~~~~~~e~~~~~~~~P~s--~Yg~SK~a~E~l~~~~~-~~~gl~~v~lR~~~vyGp~~~~~~~ 268 (442)
T PLN02572 197 TPN---IDI--EEGYITITHNGRTDTLPYPKQASS--FYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVRTDETMM 268 (442)
T ss_pred CCC---CCC--cccccccccccccccccCCCCCCC--cchhHHHHHHHHHHHHH-HhcCCCEEEEecccccCCCCccccc
Confidence 321 000 011111 232 333332 3664 44554444 66799999999999999543210
Q ss_pred ----------ch-hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCC--CceeccCCCe
Q 015961 215 ----------MN-LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKN--EAFNCNNGDV 281 (397)
Q Consensus 215 ----------~~-~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g--~~yni~~~~~ 281 (397)
.+ +...+..++. ....+.++.+.|++.+.++++|+.|+ |.+++.++......| ++||+++ ..
T Consensus 269 ~~~li~~~~~~~~~~~~i~~~~~-~~~~g~~i~v~g~G~~~Rdfi~V~Dv---a~a~~~al~~~~~~g~~~i~Nigs-~~ 343 (442)
T PLN02572 269 DEELINRLDYDGVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGFLDIRDT---VRCIEIAIANPAKPGEFRVFNQFT-EQ 343 (442)
T ss_pred ccccccccCcccchhhHHHHHHH-HHhcCCCceecCCCCEEECeEEHHHH---HHHHHHHHhChhhcCceeEEEeCC-Cc
Confidence 00 0011111111 11125666677888877888877776 677766665432334 5899986 67
Q ss_pred eehHHHHHHHHHH---hCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcC
Q 015961 282 FKWKHLWKVLAEQ---FGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTG 358 (397)
Q Consensus 282 ~s~~el~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
+|++|+++.+.+. +|.+..... .+. +... . ..
T Consensus 344 ~si~el~~~i~~~~~~~g~~~~~~~----------~p~-------------------------~~~~-~---------~~ 378 (442)
T PLN02572 344 FSVNELAKLVTKAGEKLGLDVEVIS----------VPN-------------------------PRVE-A---------EE 378 (442)
T ss_pred eeHHHHHHHHHHHHHhhCCCCCeee----------CCC-------------------------Cccc-c---------cc
Confidence 9999999999999 775532100 000 0000 0 00
Q ss_pred cccccchhhHHHcCCCCcc---CCHHHHHHHHHHHhcC
Q 015961 359 EAKLASMNKSKEHGFSGFR---NSKNSFITWIDKVKGF 393 (397)
Q Consensus 359 ~~~~~d~~k~~~lG~~p~~---~~~e~~~~~~~~~~~~ 393 (397)
.....|++|+++|||+|.+ ++++++.++++||++.
T Consensus 379 ~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~ 416 (442)
T PLN02572 379 HYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR 416 (442)
T ss_pred cccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence 0234699999999999999 9999999999999864
No 6
>PLN02214 cinnamoyl-CoA reductase
Probab=100.00 E-value=3.3e-33 Score=264.58 Aligned_cols=298 Identities=15% Similarity=0.154 Sum_probs=200.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHccC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQL 95 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~ 95 (397)
.++++|||||||||||++|+++|++ +|++|++++|+.... .. ...+++++.+|++|.+++.++++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLE-----RGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGC 82 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcC
Confidence 4567899999999999999999999 899999999975421 10 1135788999999999999999999
Q ss_pred CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCC-ccccccccccCCCCCCCCCCCCCCCCC-
Q 015961 96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT-KHYLGPFEAFGKIKPYDPPFTEDMPRL- 173 (397)
Q Consensus 96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~-~~y~ss~~~~g~~~~~~~~~~E~~p~~- 173 (397)
|.|+|+|+.. ..++...+++|+.|+.+++++|++.+ +++++++||. .+|+... .....+++|+++..
T Consensus 83 d~Vih~A~~~---~~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~------~~~~~~~~E~~~~~~ 151 (342)
T PLN02214 83 DGVFHTASPV---TDDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPN------RDPEAVVDESCWSDL 151 (342)
T ss_pred CEEEEecCCC---CCCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCC------CCCCcccCcccCCCh
Confidence 9999998642 34577889999999999999999864 6788888864 3453210 00113466764211
Q ss_pred --C-CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961 174 --D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 245 (397)
Q Consensus 174 --~-~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 245 (397)
+ .+...|+. |+++..+. ++.+++++++||++|||+......+. .+.....+. .+.... .+ .+.+
T Consensus 152 ~~~~~p~~~Y~~sK~~aE~~~~~~~-~~~g~~~v~lRp~~vyGp~~~~~~~~--~~~~~~~~~--~g~~~~-~~--~~~~ 223 (342)
T PLN02214 152 DFCKNTKNWYCYGKMVAEQAAWETA-KEKGVDLVVLNPVLVLGPPLQPTINA--SLYHVLKYL--TGSAKT-YA--NLTQ 223 (342)
T ss_pred hhccccccHHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCCc--hHHHHHHHH--cCCccc-CC--CCCc
Confidence 1 11223654 55655554 56799999999999999543211111 111111111 232222 22 2334
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961 246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
.++|+.|+ |++++.++..+. .++.||+++ ...+++|+++.+++.++....+ ... .
T Consensus 224 ~~i~V~Dv---a~a~~~al~~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~--------------~~~----~-- 278 (342)
T PLN02214 224 AYVDVRDV---ALAHVLVYEAPS-ASGRYLLAE-SARHRGEVVEILAKLFPEYPLP--------------TKC----K-- 278 (342)
T ss_pred CeeEHHHH---HHHHHHHHhCcc-cCCcEEEec-CCCCHHHHHHHHHHHCCCCCCC--------------CCC----c--
Confidence 56555554 788887776543 456899987 5789999999999998632111 000 0
Q ss_pred hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~ 397 (397)
...+.. .....+|++|+++|||+| ++++|+|+++++|+++.|++|
T Consensus 279 -----------~~~~~~---------------~~~~~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~~~~~~ 323 (342)
T PLN02214 279 -----------DEKNPR---------------AKPYKFTNQKIKDLGLEF-TSTKQSLYDTVKSLQEKGHLA 323 (342)
T ss_pred -----------cccCCC---------------CCccccCcHHHHHcCCcc-cCHHHHHHHHHHHHHHcCCCC
Confidence 000000 002347999999999998 699999999999999999985
No 7
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=100.00 E-value=1.9e-33 Score=268.69 Aligned_cols=298 Identities=12% Similarity=0.047 Sum_probs=205.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCC-CCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 103 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~ 103 (397)
.+|+|||||||||||++|+++|.+ .||+|++++|........ ...++++.+|++|.+.+..++.++|.|+|+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~-----~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKA-----EGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHh-----CCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 357999999999999999999998 899999999864322111 12357889999999998888889999999987
Q ss_pred eccc---CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC--CCCCCCCc
Q 015961 104 VTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM--PRLDAPNF 178 (397)
Q Consensus 104 ~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~--p~~~~~~~ 178 (397)
.... ...++...+..|+.++.|++++|++.+ +++|+++||..+|+... . . ....++.|+. |..|...
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~--vk~~V~~SS~~vYg~~~-~-~---~~~~~~~E~~~~p~~p~s~- 166 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARING--VKRFFYASSACIYPEFK-Q-L---ETNVSLKESDAWPAEPQDA- 166 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhC--CCEEEEeCchhhcCCcc-c-c---CcCCCcCcccCCCCCCCCH-
Confidence 5321 122445567889999999999998754 78999888877665321 0 0 0123456654 4445433
Q ss_pred chhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc--chh-HHHHHHHHHHhhhcCCCceecCCccccceeeec
Q 015961 179 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNL-VGALCVYAAVCKHEGIPLRFPGTKAAWECYSIA 250 (397)
Q Consensus 179 ~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~ 250 (397)
|+. |+++..+. ++.+++++++||++|||+..... ... ...+.. .+.+ .+.++.++|++.+.+.++|+
T Consensus 167 -Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~--~~~~-~~~~i~~~g~g~~~r~~i~v 241 (370)
T PLN02695 167 -YGLEKLATEELCKHYT-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCR--KALT-STDEFEMWGDGKQTRSFTFI 241 (370)
T ss_pred -HHHHHHHHHHHHHHHH-HHhCCCEEEEEECCccCCCCCccccccccHHHHHH--HHHc-CCCCeEEeCCCCeEEeEEeH
Confidence 554 55555554 56799999999999999532211 111 111211 1111 23566777888777777777
Q ss_pred ccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHH
Q 015961 251 SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE 330 (397)
Q Consensus 251 ~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (397)
.|+ ++++++++... .+++||+++++.+|++|+++.+.+.+|.+.+... .+
T Consensus 242 ~D~---a~ai~~~~~~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~------------~~------------- 291 (370)
T PLN02695 242 DEC---VEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKH------------IP------------- 291 (370)
T ss_pred HHH---HHHHHHHHhcc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCcee------------cC-------------
Confidence 665 67766655442 3578999999999999999999999986432110 00
Q ss_pred HHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 331 EIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
.+... . ...+|++|+++ +||+|+++++++|+++++|+++.
T Consensus 292 --------~~~~~---~------------~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~ 332 (370)
T PLN02695 292 --------GPEGV---R------------GRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQ 332 (370)
T ss_pred --------CCCCc---c------------ccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 00000 0 12369999996 69999999999999999999753
No 8
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=100.00 E-value=1.4e-33 Score=273.30 Aligned_cols=286 Identities=15% Similarity=0.145 Sum_probs=199.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 100 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h 100 (397)
++|||||||||||++|+++|++ +|++|++++|..... ....++++++.+|+.+. .+.++|.|+|
T Consensus 121 mkILVTGatGFIGs~Lv~~Ll~-----~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViH 190 (436)
T PLN02166 121 LRIVVTGGAGFVGSHLVDKLIG-----RGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYH 190 (436)
T ss_pred CEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEE
Confidence 5899999999999999999999 899999999853211 11224678889998764 3467899999
Q ss_pred EEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC-----CCC
Q 015961 101 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM-----PRL 173 (397)
Q Consensus 101 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~-----p~~ 173 (397)
+|+..... ..++.+.+++|+.||.+++++|++.+ . +++++||..+|+.. ...+.+|+. |..
T Consensus 191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~-r~V~~SS~~VYg~~---------~~~p~~E~~~~~~~p~~ 258 (436)
T PLN02166 191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--A-RFLLTSTSEVYGDP---------LEHPQKETYWGNVNPIG 258 (436)
T ss_pred CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECcHHHhCCC---------CCCCCCccccccCCCCC
Confidence 99864432 23678889999999999999999864 3 68888876666432 134556653 333
Q ss_pred CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-cchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961 174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY 247 (397)
Q Consensus 174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~ 247 (397)
|... |+. |+++..+. +..+++++++||++|||+.... .......+.. .+. .+.++.+.|++.+.+.+
T Consensus 259 p~s~--Yg~SK~~aE~~~~~y~-~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~--~~l--~~~~i~v~g~g~~~rdf 331 (436)
T PLN02166 259 ERSC--YDEGKRTAETLAMDYH-RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVA--QTI--RKQPMTVYGDGKQTRSF 331 (436)
T ss_pred CCCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEEccccCCCCCCCccchHHHHHH--HHh--cCCCcEEeCCCCeEEee
Confidence 3333 553 66666655 5678999999999999954221 1111111111 111 25566677888777777
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961 248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 327 (397)
Q Consensus 248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (397)
+|+.|+ +++++.++... .+++|||++++.+|++|+++.+.+.+|.+..... .
T Consensus 332 i~V~Dv---a~ai~~~~~~~--~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~----------~------------- 383 (436)
T PLN02166 332 QYVSDL---VDGLVALMEGE--HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEF----------K------------- 383 (436)
T ss_pred EEHHHH---HHHHHHHHhcC--CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeee----------C-------------
Confidence 776665 77776665432 3568999999999999999999999986532100 0
Q ss_pred HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
+..-.. .+ ...+|++|+++ +||+|+++++++|+++++|++++
T Consensus 384 ------------p~~~~~--~~----------~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 384 ------------PNTADD--PH----------KRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred ------------CCCCCC--cc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 000000 00 33579999997 59999999999999999999764
No 9
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=100.00 E-value=3.4e-33 Score=265.14 Aligned_cols=311 Identities=16% Similarity=0.116 Sum_probs=207.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC----CCC---------CCCCceEEEccCCCHHHHHHHHc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN---------ADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~----~~~---------~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
|+|||||||||||++|+++|++ .|++|++++|++.. ... ...+++++.+|++|.+.+.++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLE-----KGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHH-----CCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence 5899999999999999999999 89999999997531 000 01358899999999999999998
Q ss_pred c--CCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961 94 Q--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE 168 (397)
Q Consensus 94 ~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E 168 (397)
+ +|.|+|+|+...... .++....++|+.|+.+++++|++.+. +..+++++||..+|+.. ...+.+|
T Consensus 76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~---------~~~~~~E 146 (343)
T TIGR01472 76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKV---------QEIPQNE 146 (343)
T ss_pred hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCC---------CCCCCCC
Confidence 6 488999998644322 24567778999999999999998642 23478888876655432 1346778
Q ss_pred CCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhH-HHHHHHHH-HhhhcCC-CceecCC
Q 015961 169 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAA-VCKHEGI-PLRFPGT 240 (397)
Q Consensus 169 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~-i~~~~~~-~~~~~g~ 240 (397)
+.|..|... |+. |.++..+. ++.++++++.|+.++||+..+. ++. ..+..++. +. .+. +..+.|+
T Consensus 147 ~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~g~ 219 (343)
T TIGR01472 147 TTPFYPRSP--YAAAKLYAHWITVNYR-EAYGLFAVNGILFNHESPRRGE--NFVTRKITRAAAKIK--LGLQEKLYLGN 219 (343)
T ss_pred CCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCceEEEeecccCCCCCCc--cccchHHHHHHHHHH--cCCCCceeeCC
Confidence 887766544 664 55555443 5568999999999999954322 211 11111111 11 233 2345677
Q ss_pred ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccC---
Q 015961 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK--- 317 (397)
Q Consensus 241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~--- 317 (397)
+.+.++++|+.|+ |.+++.++.+. .+++|||++++.+|++|+++.+.+.+|.+..... .+..
T Consensus 220 g~~~rd~i~V~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~ 284 (343)
T TIGR01472 220 LDAKRDWGHAKDY---VEAMWLMLQQD--KPDDYVIATGETHSVREFVEVSFEYIGKTLNWKD----------KGINEVG 284 (343)
T ss_pred CccccCceeHHHH---HHHHHHHHhcC--CCccEEecCCCceeHHHHHHHHHHHcCCCccccc----------ccccccc
Confidence 7777888877776 77777666543 2368999999999999999999999996432100 0000
Q ss_pred HHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961 318 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 392 (397)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~ 392 (397)
+...... .. ..+.+... ..+ + .....+|++|+++ +||+|+++++|+|+++++++++
T Consensus 285 ~~~~~~~-------~~--~~~~~~~~---~~~---~----~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 285 RCKETGK-------VH--VEIDPRYF---RPT---E----VDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred cccccCc-------ee--EEeCcccc---CCC---c----cchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 0000000 00 00000000 000 0 0134579999986 6999999999999999999875
No 10
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=266.96 Aligned_cols=311 Identities=13% Similarity=0.227 Sum_probs=204.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--CCCCCCCceEEEccCC-CHHHHHHHHccCCCeeEEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVS-DPEETQAKLSQLTDVTHIFY 103 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~~V~h~a~ 103 (397)
|+|||||||||||++|+++|++. .|++|++++|+... .....++++++.+|++ +.+.+.++++++|.|+|+|+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~----~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILET----TDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhC----CCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 57999999999999999999872 37999999986532 1112346899999998 67788888899999999988
Q ss_pred ecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC---C--CC
Q 015961 104 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---D--AP 176 (397)
Q Consensus 104 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~---~--~~ 176 (397)
..... ..++...+++|+.++.+++++|++.+ ++++++||..+|+. . ...++.|+.+.. | .+
T Consensus 78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~vyg~-------~--~~~~~~ee~~~~~~~~~~~p 145 (347)
T PRK11908 78 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGM-------C--PDEEFDPEASPLVYGPINKP 145 (347)
T ss_pred cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecceeecc-------C--CCcCcCccccccccCcCCCc
Confidence 64432 23677888999999999999999753 57888887665542 1 123455554321 1 12
Q ss_pred CcchhHHH-----HHHHHHhcCCCeeEEEEcCCceeeccCCCc-------chhHHHHHHHHHHhhhcCCCceecCCcccc
Q 015961 177 NFYYTLED-----ILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTKAAW 244 (397)
Q Consensus 177 ~~~y~~e~-----~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 244 (397)
...|+..| ++..+. ++.+++++++||+++||++.... ..+...+ +. ....+.++.+.+++.+.
T Consensus 146 ~~~Y~~sK~~~e~~~~~~~-~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~---~~-~~~~~~~~~~~~~g~~~ 220 (347)
T PRK11908 146 RWIYACSKQLMDRVIWAYG-MEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQF---LG-HIVRGEPISLVDGGSQK 220 (347)
T ss_pred cchHHHHHHHHHHHHHHHH-HHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHH---HH-HHhCCCceEEecCCcee
Confidence 23477544 444443 56789999999999999643210 1111111 11 11135566666666666
Q ss_pred ceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCC-CeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHH
Q 015961 245 ECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF 321 (397)
Q Consensus 245 ~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (397)
+.++|+.|+ +.+++.++.++. ..+++|||+++ ..+|++|+++.+.+.+|..+.. .. .+..+ ++
T Consensus 221 r~~i~v~D~---a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~-~~---------~~~~~-~~ 286 (347)
T PRK11908 221 RAFTDIDDG---IDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEY-AE---------SAKKV-KL 286 (347)
T ss_pred eccccHHHH---HHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccc-cc---------ccccc-cc
Confidence 666666555 777777666543 45789999987 4799999999999999854221 00 00000 00
Q ss_pred hccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 322 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
... ....+.. ..+ .+ ...+..|++|+++ +||+|+++++|+++++++|+++.
T Consensus 287 ~~~--------------~~~~~~~-~~~--~~----~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~ 338 (347)
T PRK11908 287 VET--------------TSGAYYG-KGY--QD----VQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH 338 (347)
T ss_pred ccC--------------CchhccC-cCc--ch----hccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 000 0000000 000 00 0134568999985 69999999999999999999764
No 11
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=100.00 E-value=3.9e-33 Score=266.08 Aligned_cols=307 Identities=14% Similarity=0.109 Sum_probs=206.2
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEE-EeCCCCC-C---C---CCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPKP-N---W---NADHLVEYVQCDVSDPEETQAKLSQ--LT 96 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~-l~R~~~~-~---~---~~~~~v~~~~~Dl~d~~~l~~~~~~--~~ 96 (397)
++|||||||||||++|+++|++ +|++|++ ++|.... . . ....+++++.+|++|.+++.+++++ +|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D 76 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIIN-----ETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPD 76 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHH-----cCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCC
Confidence 6899999999999999999998 7887554 4443221 1 0 0113577899999999999998885 78
Q ss_pred CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHccc-------CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961 97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPN-------APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 167 (397)
Q Consensus 97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~-------~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~ 167 (397)
.|+|+|+...... .++.+.+++|+.|+.+++++|++. ...+++++++||..+|+ .......+++
T Consensus 77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg-------~~~~~~~~~~ 149 (355)
T PRK10217 77 CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYG-------DLHSTDDFFT 149 (355)
T ss_pred EEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcC-------CCCCCCCCcC
Confidence 8999987654322 256788999999999999999763 12367888888665553 2111234678
Q ss_pred CCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-chhHHHHHHHHHHhhhcCCCceecCCc
Q 015961 168 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGIPLRFPGTK 241 (397)
Q Consensus 168 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~ 241 (397)
|+.+..|... |+. |+++..+. ++.+++++++||++|||+ +.. ..+...+ +. ....+.++.+.|++
T Consensus 150 E~~~~~p~s~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~v~Gp--~~~~~~~~~~~---~~-~~~~~~~~~~~g~g 220 (355)
T PRK10217 150 ETTPYAPSSP--YSASKASSDHLVRAWL-RTYGLPTLITNCSNNYGP--YHFPEKLIPLM---IL-NALAGKPLPVYGNG 220 (355)
T ss_pred CCCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCeEEEeeeeeeCC--CCCcccHHHHH---HH-HHhcCCCceEeCCC
Confidence 8877665444 554 55555554 667899999999999994 432 1222212 11 11125566667877
Q ss_pred cccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHH
Q 015961 242 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF 321 (397)
Q Consensus 242 ~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (397)
.+.++++|+.|+ |.+++.++.. ...+++|||++++.+|++|+++.+++.+|...+..+ ..+..
T Consensus 221 ~~~~~~i~v~D~---a~a~~~~~~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~------------~~~~~- 283 (355)
T PRK10217 221 QQIRDWLYVEDH---ARALYCVATT-GKVGETYNIGGHNERKNLDVVETICELLEELAPNKP------------QGVAH- 283 (355)
T ss_pred CeeeCcCcHHHH---HHHHHHHHhc-CCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccc------------ccccc-
Confidence 777666665555 7777666654 445789999999999999999999999986432211 10000
Q ss_pred hccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 322 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
... . ....+.... ......+|++|+++ |||+|.++++|+|+++++|++..
T Consensus 284 ~~~-------~---~~~~~~~~~------------~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~ 334 (355)
T PRK10217 284 YRD-------L---ITFVADRPG------------HDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN 334 (355)
T ss_pred ccc-------c---ceecCCCCC------------CCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence 000 0 000000000 00134579999975 79999999999999999999765
No 12
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=100.00 E-value=4e-33 Score=284.97 Aligned_cols=316 Identities=16% Similarity=0.209 Sum_probs=209.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHH-HHHHHccCCCeeEEE
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVTHIF 102 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~-l~~~~~~~~~V~h~a 102 (397)
.++|||||||||||++|+++|++. .||+|++++|.+... ....++++++.+|++|... +.++++++|.|+|+|
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRD----DNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhC----CCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 468999999999999999999972 379999999976431 1223478999999998765 577889999999999
Q ss_pred EecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC---CCC--
Q 015961 103 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR---LDA-- 175 (397)
Q Consensus 103 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~---~~~-- 175 (397)
+..... ..++.+.+++|+.++.+++++|++.+ ++++++||..+| |.. ...+++|+.+. .|.
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~vy-------g~~--~~~~~~E~~~~~~~~p~~~ 458 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSEVY-------GMC--TDKYFDEDTSNLIVGPINK 458 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchhhc-------CCC--CCCCcCccccccccCCCCC
Confidence 865432 23567788999999999999999864 578888866555 421 13456777643 121
Q ss_pred CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc--hh--HHHHHHHHHHhhhcCCCceecCCccccce
Q 015961 176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--NL--VGALCVYAAVCKHEGIPLRFPGTKAAWEC 246 (397)
Q Consensus 176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~--~~--~~~~~~~~~i~~~~~~~~~~~g~~~~~~~ 246 (397)
+...|+. |+++..+. +.++++++++||++|||++..... .. ...+..++. ....+.++.+.|++.+.++
T Consensus 459 p~s~Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~-~~~~~~~i~~~g~g~~~rd 536 (660)
T PRK08125 459 QRWIYSVSKQLLDRVIWAYG-EKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL-NLVEGSPIKLVDGGKQKRC 536 (660)
T ss_pred CccchHHHHHHHHHHHHHHH-HhcCCceEEEEEceeeCCCccccccccccccchHHHHHH-HhcCCCCeEEeCCCceeec
Confidence 2234664 55555554 567899999999999995432110 00 001111111 1112566667787777777
Q ss_pred eeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC-eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhc
Q 015961 247 YSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK 323 (397)
Q Consensus 247 ~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (397)
++|+.|+ |.+++.++.+.. ..+++||+++++ .+|++|+++.+.+.+|.+...... +.. ....
T Consensus 537 ~i~v~Dv---a~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~----------~~~--~~~~ 601 (660)
T PRK08125 537 FTDIRDG---IEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHF----------PPF--AGFR 601 (660)
T ss_pred eeeHHHH---HHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccC----------Ccc--cccc
Confidence 7777665 777766665432 357899999985 799999999999999964321110 000 0000
Q ss_pred cchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCC
Q 015961 324 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK 394 (397)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~ 394 (397)
. ........ ..| .+. ....+|++|+|+ |||+|+++++|+|+++++|+++..
T Consensus 602 ~-------------~~~~~~~~-~~~--~~~----~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~ 653 (660)
T PRK08125 602 V-------------VESSSYYG-KGY--QDV----EHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_pred c-------------cccccccc-ccc--ccc----cccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 0 00000000 000 000 134579999986 699999999999999999999764
No 13
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=100.00 E-value=7.5e-33 Score=262.52 Aligned_cols=300 Identities=16% Similarity=0.127 Sum_probs=206.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC----CCC--------CCCCceEEEccCCCHHHHHH
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN--------ADHLVEYVQCDVSDPEETQA 90 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~----~~~--------~~~~v~~~~~Dl~d~~~l~~ 90 (397)
+.++++|||||||||||++|+++|++ +|++|++++|++.. ... ...+++++.+|++|.+.+.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLS-----KGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence 44568999999999999999999999 89999999986532 110 01357899999999999988
Q ss_pred HHcc--CCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCC---CcceEEEecCCccccccccccCCCCCCC
Q 015961 91 KLSQ--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAP---NLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 91 ~~~~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~---~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
+++. +|.|+|+|+...... .++...+++|+.|+.+++++|++.+. ++++++++||..+| |.. .
T Consensus 78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vy-------g~~---~ 147 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMY-------GST---P 147 (340)
T ss_pred HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHh-------CCC---C
Confidence 8875 478999987643322 25567779999999999999987642 13478877765555 432 2
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHH-HHHHHH-HhhhcCCCc-
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAA-VCKHEGIPL- 235 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~-i~~~~~~~~- 235 (397)
.+++|+.|..|... |+. |.++..+. ++++++++..|+.++||+..+ .++... +..++. +. .+.++
T Consensus 148 ~~~~E~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~--~~~~~~~~~~~~~~~~--~~~~~~ 220 (340)
T PLN02653 148 PPQSETTPFHPRSP--YAVAKVAAHWYTVNYR-EAYGLFACNGILFNHESPRRG--ENFVTRKITRAVGRIK--VGLQKK 220 (340)
T ss_pred CCCCCCCCCCCCCh--hHHHHHHHHHHHHHHH-HHcCCeEEEeeeccccCCCCC--cccchhHHHHHHHHHH--cCCCCc
Confidence 36788888776544 554 55555443 567888899999999995332 222211 211111 22 23333
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 015961 236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR 315 (397)
Q Consensus 236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 315 (397)
.+.|++.+.++++|+.|+ |.+++.++... .++.||+++++.+|++|+++.+.+.+|.+.... ..
T Consensus 221 ~~~g~g~~~rd~i~v~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~-----------~~ 284 (340)
T PLN02653 221 LFLGNLDASRDWGFAGDY---VEAMWLMLQQE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDH-----------VE 284 (340)
T ss_pred eEeCCCcceecceeHHHH---HHHHHHHHhcC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcc-----------ee
Confidence 345777777777776665 77777766543 256899999999999999999999998642110 00
Q ss_pred cCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961 316 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 392 (397)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~ 392 (397)
... ....+... ....+|++|+++ |||+|+++++|+|+++++|+++
T Consensus 285 ~~~-----------------~~~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 285 IDP-----------------RYFRPAEV---------------DNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred eCc-----------------ccCCcccc---------------ccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 000 00001000 133579999986 6999999999999999998874
No 14
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=100.00 E-value=9.6e-33 Score=283.56 Aligned_cols=302 Identities=15% Similarity=0.125 Sum_probs=211.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-C---C---CCCCCceEEEccCCCHHHHHHHH--ccC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-N---W---NADHLVEYVQCDVSDPEETQAKL--SQL 95 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~---~---~~~~~v~~~~~Dl~d~~~l~~~~--~~~ 95 (397)
.+|+|||||||||||++|+++|++.. .+++|++++|.... . . ...++++++.+|++|.+.+..++ .++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g---~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNY---PDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGI 81 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhC---CCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence 34799999999999999999999721 26899999985311 0 0 11247899999999998887665 568
Q ss_pred CCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC
Q 015961 96 TDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL 173 (397)
Q Consensus 96 ~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~ 173 (397)
|.|+|+|+...... .++.+.+++|+.||.+++++|++.+ .+++++++||..+|+... .. ...+..|+.+..
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~--~~----~~~~~~E~~~~~ 154 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETD--ED----ADVGNHEASQLL 154 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCc--cc----cccCccccCCCC
Confidence 88999987644322 2566788999999999999999864 478999998877665321 00 012235666655
Q ss_pred CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc-hhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961 174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECY 247 (397)
Q Consensus 174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~ 247 (397)
|... |+. |+++..+. ++.+++++++||++|||+ +... .+...+ .... ..+.++.+.|++.+.+++
T Consensus 155 p~~~--Y~~sK~~aE~~v~~~~-~~~~l~~vilR~~~VyGp--~~~~~~~i~~~---~~~a-~~g~~i~i~g~g~~~r~~ 225 (668)
T PLN02260 155 PTNP--YSATKAGAEMLVMAYG-RSYGLPVITTRGNNVYGP--NQFPEKLIPKF---ILLA-MQGKPLPIHGDGSNVRSY 225 (668)
T ss_pred CCCC--cHHHHHHHHHHHHHHH-HHcCCCEEEECcccccCc--CCCcccHHHHH---HHHH-hCCCCeEEecCCCceEee
Confidence 5444 553 66666554 567899999999999994 4321 222222 1111 135566777888777777
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961 248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 327 (397)
Q Consensus 248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (397)
+|+.|+ |++++.++.. ...+++||+++++.+|++|+++.+++.+|.+......
T Consensus 226 ihV~Dv---a~a~~~~l~~-~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~----------------------- 278 (668)
T PLN02260 226 LYCEDV---AEAFEVVLHK-GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIK----------------------- 278 (668)
T ss_pred EEHHHH---HHHHHHHHhc-CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceee-----------------------
Confidence 777776 6666655533 4457899999999999999999999999975321000
Q ss_pred HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCC
Q 015961 328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFK 394 (397)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~ 394 (397)
+ ....++. ...+.+|++|++++||+|.++++|+|+++++|+++.+
T Consensus 279 --------~-~~~~p~~-------------~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~ 323 (668)
T PLN02260 279 --------F-VENRPFN-------------DQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP 323 (668)
T ss_pred --------e-cCCCCCC-------------cceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence 0 0000110 0134579999999999999999999999999998764
No 15
>PLN00198 anthocyanidin reductase; Provisional
Probab=100.00 E-value=1.2e-32 Score=261.02 Aligned_cols=303 Identities=15% Similarity=0.096 Sum_probs=197.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHcc
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQ 94 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~~ 94 (397)
+.++++||||||+||||++|+++|++ +|++|++++|+.... ....++++++.+|++|.+++...+++
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQ-----KGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG 80 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHH-----CCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc
Confidence 34467899999999999999999999 899999999875321 11113588999999999999999999
Q ss_pred CCCeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC---
Q 015961 95 LTDVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM--- 170 (397)
Q Consensus 95 ~~~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~--- 170 (397)
+|.|+|+|+.......++ ...+++|+.|+.++++++++.. .+++++++||..+|+... ..+. ..+.+|+.
T Consensus 81 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~-~~~~----~~~~~E~~~~~ 154 (338)
T PLN00198 81 CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINK-LSGT----GLVMNEKNWTD 154 (338)
T ss_pred CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccC-CCCC----CceeccccCCc
Confidence 999999987532222233 3567999999999999998752 477899888776664320 0010 12333331
Q ss_pred ------CCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 015961 171 ------PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG 239 (397)
Q Consensus 171 ------p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g 239 (397)
+..|... |+. |+++..+. ++.+++++++||++|||++..........+ ...+. .+.++.+.|
T Consensus 155 ~~~~~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~--~~~~~--~~~~~~~~g 227 (338)
T PLN00198 155 VEFLTSEKPPTWG--YPASKTLAEKAAWKFA-EENNIDLITVIPTLMAGPSLTSDIPSSLSL--AMSLI--TGNEFLING 227 (338)
T ss_pred hhhhhhcCCccch--hHHHHHHHHHHHHHHH-HhcCceEEEEeCCceECCCccCCCCCcHHH--HHHHH--cCCcccccc
Confidence 1112222 554 55555555 667899999999999996432111111111 11111 133333333
Q ss_pred -Cccc----cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 015961 240 -TKAA----WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ 314 (397)
Q Consensus 240 -~~~~----~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~ 314 (397)
.+.+ .++++|+ +++|++++.++.... .++.|+ +++..+|++|+++.+.+.++....+
T Consensus 228 ~~~~~~~~~~~~~i~V---~D~a~a~~~~~~~~~-~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~------------- 289 (338)
T PLN00198 228 LKGMQMLSGSISITHV---EDVCRAHIFLAEKES-ASGRYI-CCAANTSVPELAKFLIKRYPQYQVP------------- 289 (338)
T ss_pred ccccccccCCcceeEH---HHHHHHHHHHhhCcC-cCCcEE-EecCCCCHHHHHHHHHHHCCCCCCC-------------
Confidence 1111 1345554 445777777665533 334685 5567899999999999887532111
Q ss_pred ccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCC
Q 015961 315 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFK 394 (397)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~ 394 (397)
.. ++..+.. ....+|.+|++++||+|+++++|+|+++++|+++++
T Consensus 290 -~~------------------~~~~~~~----------------~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 290 -TD------------------FGDFPSK----------------AKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred -cc------------------ccccCCC----------------CccccChHHHHhCCceecCcHHHHHHHHHHHHHHcC
Confidence 00 0000000 023479999998999999999999999999999999
Q ss_pred CC
Q 015961 395 IV 396 (397)
Q Consensus 395 ~~ 396 (397)
++
T Consensus 335 ~~ 336 (338)
T PLN00198 335 LL 336 (338)
T ss_pred CC
Confidence 87
No 16
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.2e-33 Score=240.44 Aligned_cols=302 Identities=17% Similarity=0.153 Sum_probs=218.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC---C-CC---CCCCCCceEEEccCCCHHHHHHHHc--cCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---K-PN---WNADHLVEYVQCDVSDPEETQAKLS--QLTD 97 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~---~-~~---~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~ 97 (397)
+++|||||+||||++.+..+..+++ .++.+.++--. . .. ....++.+++.+|+.+...+...+. .+|.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p---~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYP---DYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCC---CCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 7999999999999999999998663 44666665421 1 11 1234788999999999988777664 3667
Q ss_pred eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961 98 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 175 (397)
Q Consensus 98 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~ 175 (397)
|+|.|+.+....+ ++.+....|+.+|..|+++++..+ ++++|+++||..+||.+. . .....|.+.+.|.
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~-------~-~~~~~E~s~~nPt 154 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSD-------E-DAVVGEASLLNPT 154 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCcc-------c-cccccccccCCCC
Confidence 9999887665433 778888999999999999999864 699999998777665431 1 1222377776776
Q ss_pred CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCc-chhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 015961 176 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI 249 (397)
Q Consensus 176 ~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~ 249 (397)
.+ |+. |..+..+. ++++++++++|.++||| |+.. ..... .|+.+.. .+.+..+.|++.+.+.+++
T Consensus 155 np--yAasKaAaE~~v~Sy~-~sy~lpvv~~R~nnVYG--P~q~~~klip---kFi~l~~-~~~~~~i~g~g~~~rs~l~ 225 (331)
T KOG0747|consen 155 NP--YAASKAAAEMLVRSYG-RSYGLPVVTTRMNNVYG--PNQYPEKLIP---KFIKLAM-RGKEYPIHGDGLQTRSYLY 225 (331)
T ss_pred Cc--hHHHHHHHHHHHHHHh-hccCCcEEEEeccCccC--CCcChHHHhH---HHHHHHH-hCCCcceecCcccceeeEe
Confidence 66 554 55555555 88999999999999999 6533 22222 3333232 3667788999999999999
Q ss_pred cccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHH
Q 015961 250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW 329 (397)
Q Consensus 250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (397)
+.|+ ++++-.+. ..+..|++|||+++...+..|+++.+.+.+++..+.... .+...++.
T Consensus 226 veD~---~ea~~~v~-~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~-----------~p~~~~v~------ 284 (331)
T KOG0747|consen 226 VEDV---SEAFKAVL-EKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDT-----------EPFIFFVE------ 284 (331)
T ss_pred HHHH---HHHHHHHH-hcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCC-----------CCcceecC------
Confidence 9887 45544444 447779999999999999999999999998875443211 11101111
Q ss_pred HHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961 330 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
..+..+ .++.+|.+|+|.|||+|+++.++||+.+++||.++
T Consensus 285 ----------dRp~nd-------------~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 285 ----------DRPYND-------------LRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred ----------CCCccc-------------ccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence 111111 16678999999999999999999999999999765
No 17
>PLN02206 UDP-glucuronate decarboxylase
Probab=100.00 E-value=1.8e-32 Score=266.09 Aligned_cols=286 Identities=17% Similarity=0.130 Sum_probs=197.7
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 100 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h 100 (397)
|+|||||||||||++|+++|++ +|++|++++|..... .....+++++.+|+.++ .+.++|.|+|
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~-----~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViH 189 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMA-----RGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYH 189 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHH-----CcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEE
Confidence 6899999999999999999999 899999998753211 11234678899998775 3467899999
Q ss_pred EEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC-----CCC
Q 015961 101 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM-----PRL 173 (397)
Q Consensus 101 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~-----p~~ 173 (397)
+|+..... ..++.+.+++|+.|+.||+++|++.+ + +++++||..+|+.. ...+.+|+. |..
T Consensus 190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~-r~V~~SS~~VYg~~---------~~~p~~E~~~~~~~P~~ 257 (442)
T PLN02206 190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--A-RFLLTSTSEVYGDP---------LQHPQVETYWGNVNPIG 257 (442)
T ss_pred eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECChHHhCCC---------CCCCCCccccccCCCCC
Confidence 99865432 23677889999999999999999864 3 68888876666432 123455553 222
Q ss_pred CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-cchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961 174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY 247 (397)
Q Consensus 174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~ 247 (397)
+. ..|+. |+++..+. +..+++++++||+++||+.... .......+ +. ....+.++.++|++.+.+++
T Consensus 258 ~~--s~Y~~SK~~aE~~~~~y~-~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~---i~-~~l~~~~i~i~g~G~~~rdf 330 (442)
T PLN02206 258 VR--SCYDEGKRTAETLTMDYH-RGANVEVRIARIFNTYGPRMCIDDGRVVSNF---VA-QALRKEPLTVYGDGKQTRSF 330 (442)
T ss_pred cc--chHHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCCccccchHHHH---HH-HHHcCCCcEEeCCCCEEEeE
Confidence 22 23654 55555554 5678999999999999954221 11222112 11 11125566777888777777
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961 248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 327 (397)
Q Consensus 248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (397)
+|+.|+ |++++.++... .+++|||++++.+|++|+++.+++.+|.+..... .+.
T Consensus 331 i~V~Dv---a~ai~~a~e~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~----------~p~----------- 384 (442)
T PLN02206 331 QFVSDL---VEGLMRLMEGE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEF----------RPN----------- 384 (442)
T ss_pred EeHHHH---HHHHHHHHhcC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCceee----------CCC-----------
Confidence 776665 77777666432 3568999999999999999999999985422100 000
Q ss_pred HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
.... .+ ...+|++|+++ +||+|+++++|+|+++++|+++.
T Consensus 385 -----------~~~~-----~~----------~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~ 425 (442)
T PLN02206 385 -----------TEDD-----PH----------KRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQR 425 (442)
T ss_pred -----------CCCC-----cc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 0000 00 23479999986 69999999999999999999764
No 18
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=100.00 E-value=1.8e-32 Score=247.22 Aligned_cols=304 Identities=18% Similarity=0.194 Sum_probs=207.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHccC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQL 95 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~ 95 (397)
++++|+|||||||||++++++|++ +||.|++.+|++... +. ..+++..+.+||+|.+++..++.+|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~-----rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLS-----RGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHh-----CCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence 567999999999999999999999 899999999987652 11 2345889999999999999999999
Q ss_pred CCeeEEEEecccCCC-cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961 96 TDVTHIFYVTWTNRS-TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 174 (397)
Q Consensus 96 ~~V~h~a~~~~~~~~-~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~ 174 (397)
|.|||+|+....... ++.+..++++.||.|+|++|++.. .|++++++||...-... ++.......++|+....+
T Consensus 80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~----~~~~~~~~vvdE~~wsd~ 154 (327)
T KOG1502|consen 80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYN----GPNIGENSVVDEESWSDL 154 (327)
T ss_pred CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccC----CcCCCCCcccccccCCcH
Confidence 999999886554333 355899999999999999999964 79999999864433211 011112345566543211
Q ss_pred C----CCcchh-----HHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961 175 A----PNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 245 (397)
Q Consensus 175 ~----~~~~y~-----~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 245 (397)
. ....|. .|+...++. ++.+++.+.+.|+.|+||.-....+. .....+.+.+ |..-.+++. +.
T Consensus 155 ~~~~~~~~~Y~~sK~lAEkaAw~fa-~e~~~~lv~inP~lV~GP~l~~~l~~--s~~~~l~~i~--G~~~~~~n~---~~ 226 (327)
T KOG1502|consen 155 DFCRCKKLWYALSKTLAEKAAWEFA-KENGLDLVTINPGLVFGPGLQPSLNS--SLNALLKLIK--GLAETYPNF---WL 226 (327)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHH-HhCCccEEEecCCceECCCcccccch--hHHHHHHHHh--cccccCCCC---ce
Confidence 0 012244 277777776 77799999999999999543221222 1111122222 211112221 11
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961 246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
. ..|++++|.+++.+.+.+.+.|+ |.|.+ ...++.|+++++.+.+..-..+...
T Consensus 227 ~---~VdVrDVA~AHv~a~E~~~a~GR-yic~~-~~~~~~ei~~~l~~~~P~~~ip~~~--------------------- 280 (327)
T KOG1502|consen 227 A---FVDVRDVALAHVLALEKPSAKGR-YICVG-EVVSIKEIADILRELFPDYPIPKKN--------------------- 280 (327)
T ss_pred e---eEeHHHHHHHHHHHHcCcccCce-EEEec-CcccHHHHHHHHHHhCCCCCCCCCC---------------------
Confidence 2 34555569999998888777755 87776 4555999999999887543211000
Q ss_pred hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~ 397 (397)
...... ......+|.+|++++|+.-.++++|++.+++++++++|.++
T Consensus 281 -------------~~~~~~------------~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~ 327 (327)
T KOG1502|consen 281 -------------AEEHEG------------FLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL 327 (327)
T ss_pred -------------Cccccc------------cccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence 000000 00023479999999985559999999999999999999874
No 19
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=2e-32 Score=257.78 Aligned_cols=298 Identities=16% Similarity=0.171 Sum_probs=199.0
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHccCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
+++|||||||||||++|+++|++ +|++|++++|+.... .. ..++++++.+|++|++.+..+++++|
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 78 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQ-----RGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCE 78 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHH-----CCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCC
Confidence 47899999999999999999999 899999999875421 00 12468899999999999999999999
Q ss_pred CeeEEEEecccCCCcHH-HHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC-CCCCCCCCCCCCCC
Q 015961 97 DVTHIFYVTWTNRSTEA-ENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD 174 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~~-~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~~~~E~~p~~~ 174 (397)
.|+|+|+.......++. ..+++|+.|+.+++++|++. .++++++++||...+ .|+... ....+++|+.+..|
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~v~~SS~~~~-----~y~~~~~~~~~~~~E~~~~~p 152 (322)
T PLN02662 79 GVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV-PSVKRVVVTSSMAAV-----AYNGKPLTPDVVVDETWFSDP 152 (322)
T ss_pred EEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEccCHHHh-----cCCCcCCCCCCcCCcccCCCh
Confidence 99999875432223443 77899999999999999875 237799988875422 232111 11345777766544
Q ss_pred C----CCcchhHH-----HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961 175 A----PNFYYTLE-----DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 245 (397)
Q Consensus 175 ~----~~~~y~~e-----~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 245 (397)
. ....|+.. +++..+. ++.+++++++||+++||+......+....+ ...+.. +.+ .++ .+.+
T Consensus 153 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~--~~~~~~--~~~-~~~---~~~~ 223 (322)
T PLN02662 153 AFCEESKLWYVLSKTLAEEAAWKFA-KENGIDMVTINPAMVIGPLLQPTLNTSAEA--ILNLIN--GAQ-TFP---NASY 223 (322)
T ss_pred hHhhcccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCcccCCCCCCCCCchHHH--HHHHhc--CCc-cCC---CCCc
Confidence 2 11236654 4444443 567899999999999995322111111111 111111 322 122 2334
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961 246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
+++|+.| +|++++.++..+.. ++.||++ +..+|++|+++.+.+.++....+. . ..
T Consensus 224 ~~i~v~D---va~a~~~~~~~~~~-~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~~~-----------~-~~-------- 278 (322)
T PLN02662 224 RWVDVRD---VANAHIQAFEIPSA-SGRYCLV-ERVVHYSEVVKILHELYPTLQLPE-----------K-CA-------- 278 (322)
T ss_pred CeEEHHH---HHHHHHHHhcCcCc-CCcEEEe-CCCCCHHHHHHHHHHHCCCCCCCC-----------C-CC--------
Confidence 5555555 47887777665433 3468887 578999999999999876421110 0 00
Q ss_pred hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV 396 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~ 396 (397)
...+. .....+|++|++++||++ ++++|+++++++||+++|++
T Consensus 279 -------------~~~~~--------------~~~~~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~~~~ 321 (322)
T PLN02662 279 -------------DDKPY--------------VPTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFL 321 (322)
T ss_pred -------------Ccccc--------------ccccccChHHHHHhCCcc-ccHHHHHHHHHHHHHHcCCC
Confidence 00000 002347999999999996 79999999999999999986
No 20
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=4e-32 Score=255.99 Aligned_cols=301 Identities=19% Similarity=0.191 Sum_probs=203.2
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceEEEccCCCHHHHHHHHccCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
+|+||||||+||||++|+++|++ +|++|++++|++.... ....+++++.+|++|.+++.++++++|
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 79 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLF-----RGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE 79 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence 47999999999999999999999 8999999988754310 011367899999999999999999999
Q ss_pred CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961 97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 174 (397)
Q Consensus 97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~ 174 (397)
.|+|+|+...... +++...+++|+.|+.+++++|.+.. .+++|+++||...|.+.....+ ...+++|+.+..|
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~----~~~~~~E~~~~~p 154 (325)
T PLN02989 80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLG----PNDVVDETFFTNP 154 (325)
T ss_pred EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCC----CCCccCcCCCCch
Confidence 9999987533222 2456788999999999999998742 3578888887655533210011 1345778877654
Q ss_pred CC----CcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961 175 AP----NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 245 (397)
Q Consensus 175 ~~----~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 245 (397)
.. ...|+. |+++..+. ++.+++++++||+++||+......++...+ ...+. .+.+.. + .+.+
T Consensus 155 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~--i~~~~--~~~~~~--~--~~~r 225 (325)
T PLN02989 155 SFAEERKQWYVLSKTLAEDAAWRFA-KDNEIDLIVLNPGLVTGPILQPTLNFSVAV--IVELM--KGKNPF--N--TTHH 225 (325)
T ss_pred hHhcccccchHHHHHHHHHHHHHHH-HHcCCeEEEEcCCceeCCCCCCCCCchHHH--HHHHH--cCCCCC--C--CcCc
Confidence 21 123654 55555554 567899999999999995432212222111 11111 132211 1 1234
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961 246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
.++|+.| +|.+++.++..+. .+++||++ +..+|++|+++.+.+.++...... .+.
T Consensus 226 ~~i~v~D---va~a~~~~l~~~~-~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~~~~-----------~~~--------- 280 (325)
T PLN02989 226 RFVDVRD---VALAHVKALETPS-ANGRYIID-GPVVTIKDIENVLREFFPDLCIAD-----------RNE--------- 280 (325)
T ss_pred CeeEHHH---HHHHHHHHhcCcc-cCceEEEe-cCCCCHHHHHHHHHHHCCCCCCCC-----------CCC---------
Confidence 5555555 4788777765543 35689995 568999999999999987321100 000
Q ss_pred hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV 396 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~ 396 (397)
+..... ..+...|++|+++|||+|.++++|+|+++++|+++.|.+
T Consensus 281 -------------~~~~~~-------------~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~ 325 (325)
T PLN02989 281 -------------DITELN-------------SVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV 325 (325)
T ss_pred -------------Cccccc-------------ccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 000000 003457999999999999999999999999999988863
No 21
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=100.00 E-value=8.7e-33 Score=258.54 Aligned_cols=289 Identities=12% Similarity=0.141 Sum_probs=185.9
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH---HH-HHHHc-----cCCCee
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE---ET-QAKLS-----QLTDVT 99 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~---~l-~~~~~-----~~~~V~ 99 (397)
|||||||||||++|+++|++ .|++|+++.|+..... ....+..+|+.|.. ++ ...+. ++|.|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~-----~g~~~v~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi 73 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGT---KFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF 73 (308)
T ss_pred EEEecCCcHHHHHHHHHHHh-----CCCceEEEecCCCcch---HHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence 89999999999999999998 7998777766533211 01223456666543 32 33332 578899
Q ss_pred EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 015961 100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY 179 (397)
Q Consensus 100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~ 179 (397)
|+|+.......++...++.|+.++.+|+++|++.+ + +++++||..+|+.. ...+.+|+.+..|...
T Consensus 74 h~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~-~~i~~SS~~vyg~~---------~~~~~~E~~~~~p~~~-- 139 (308)
T PRK11150 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATYGGR---------TDDFIEEREYEKPLNV-- 139 (308)
T ss_pred ECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEcchHHhCcC---------CCCCCccCCCCCCCCH--
Confidence 99985443333556678999999999999999864 4 57888876655431 1234567666555444
Q ss_pred hhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHH-HHhhhcCC-CceecCCccccceeeeccc
Q 015961 180 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYA-AVCKHEGI-PLRFPGTKAAWECYSIASD 252 (397)
Q Consensus 180 y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~i~~~~~~-~~~~~g~~~~~~~~~~~~d 252 (397)
|+. |+++..+. .+.+++++++||++|||++..........+..+. .+.+ +. +..+.|++...++++|+.|
T Consensus 140 Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~g~~~~~r~~i~v~D 216 (308)
T PRK11150 140 YGYSKFLFDEYVRQIL-PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNN--GENPKLFEGSENFKRDFVYVGD 216 (308)
T ss_pred HHHHHHHHHHHHHHHH-HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhc--CCCCEEecCCCceeeeeeeHHH
Confidence 664 55555554 5568999999999999954322111111111111 1222 33 3344566655566666666
Q ss_pred HHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHH
Q 015961 253 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEI 332 (397)
Q Consensus 253 a~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (397)
+ |.+++.++... .+++||++++..+|++|+++.+.+.+|...... .+.+
T Consensus 217 ~---a~a~~~~~~~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~-----------~~~~--------------- 265 (308)
T PRK11150 217 V---AAVNLWFWENG--VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEY-----------IPFP--------------- 265 (308)
T ss_pred H---HHHHHHHHhcC--CCCeEEcCCCCceeHHHHHHHHHHHhCCCccee-----------ccCc---------------
Confidence 5 66666665442 356999999999999999999999998531110 0000
Q ss_pred HHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCc-cCCHHHHHHHHHHHh
Q 015961 333 VRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGF-RNSKNSFITWIDKVK 391 (397)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~-~~~~e~~~~~~~~~~ 391 (397)
..... . .. .....|++|++++||+|+ .+++|+|+++++|+.
T Consensus 266 --------~~~~~--~-------~~-~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 266 --------DKLKG--R-------YQ-AFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred --------ccccc--c-------cc-eecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 00000 0 00 023479999999999987 599999999999975
No 22
>PLN02240 UDP-glucose 4-epimerase
Probab=100.00 E-value=5.6e-32 Score=257.89 Aligned_cols=303 Identities=17% Similarity=0.133 Sum_probs=205.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------C--CCCCCceEEEccCCCHHHHHHHHc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W--NADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~--~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
|+++|||||||||||++|+++|++ .|++|++++|..... . ....+++++.+|++|++.+..+++
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~ 78 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLL-----AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFA 78 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHH
Confidence 458999999999999999999998 799999998753211 0 012468899999999999988886
Q ss_pred --cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED 169 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~ 169 (397)
++|.|+|+|+..... ..++...+++|+.++.+++++|++.+ +++++++||..+|+.. ...+++|+
T Consensus 79 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~---------~~~~~~E~ 147 (352)
T PLN02240 79 STRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG--CKKLVFSSSATVYGQP---------EEVPCTEE 147 (352)
T ss_pred hCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhCCC---------CCCCCCCC
Confidence 478899998753222 23567789999999999999998753 6788888876555421 24567888
Q ss_pred CCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-----cchhHHHHHHHH-HHhhhcCCCceec
Q 015961 170 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-----LMNLVGALCVYA-AVCKHEGIPLRFP 238 (397)
Q Consensus 170 ~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~-~i~~~~~~~~~~~ 238 (397)
.|..+... |+. |+++..+.....+++++++|++++||+.+.. .......+..++ .+..+...++.+.
T Consensus 148 ~~~~~~~~--Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T PLN02240 148 FPLSATNP--YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF 225 (352)
T ss_pred CCCCCCCH--HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence 87766443 664 5555544322357899999999999964321 000001111111 1222112233333
Q ss_pred C------CccccceeeecccHHHHHHHHHHHhcC----CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhc
Q 015961 239 G------TKAAWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEE 308 (397)
Q Consensus 239 g------~~~~~~~~~~~~da~~la~~~~~~~~~----~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~ 308 (397)
| ++.+.++++|+.|+ |++++.++.. ....+++||+++++.+|++|+++.+++.+|.+.+....
T Consensus 226 g~~~~~~~g~~~~~~i~v~D~---a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~---- 298 (352)
T PLN02240 226 GNDYPTKDGTGVRDYIHVMDL---ADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLA---- 298 (352)
T ss_pred CCCCCCCCCCEEEeeEEHHHH---HHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeC----
Confidence 3 45666677776666 6655554432 23446899999999999999999999999865332100
Q ss_pred CCCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHH
Q 015961 309 GGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWI 387 (397)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~ 387 (397)
+. .+... ..+.+|++|+++ |||+|+++++|++++++
T Consensus 299 ------~~----------------------~~~~~---------------~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~ 335 (352)
T PLN02240 299 ------PR----------------------RPGDA---------------EEVYASTEKAEKELGWKAKYGIDEMCRDQW 335 (352)
T ss_pred ------CC----------------------CCCCh---------------hhhhcCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 00 00000 023469999986 69999999999999999
Q ss_pred HHHhcCCC
Q 015961 388 DKVKGFKI 395 (397)
Q Consensus 388 ~~~~~~~~ 395 (397)
+|+++++.
T Consensus 336 ~~~~~~~~ 343 (352)
T PLN02240 336 NWASKNPY 343 (352)
T ss_pred HHHHhCcc
Confidence 99998864
No 23
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=1.1e-31 Score=252.75 Aligned_cols=298 Identities=17% Similarity=0.166 Sum_probs=199.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CC----CCCCceEEEccCCCHHHHHHHHccCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN----ADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~----~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
+++|||||||||||++|+++|++ .|++|+++.|+.... .. ...+++++.+|++|.+.+.++++++|
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLL-----RGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCD 79 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCC
Confidence 57999999999999999999999 899999999875431 00 12468899999999999999999999
Q ss_pred CeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC-CCCCCCCCCCCCCC
Q 015961 97 DVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD 174 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~~~~E~~p~~~ 174 (397)
.|+|+|+.......++ .+.+++|+.|+.+++++|++. ..+++|+++||...|. |+... ....+++|+.+..|
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~-----~~~~~~~~~~~~~E~~~~~p 153 (322)
T PLN02986 80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVL-----FRQPPIEANDVVDETFFSDP 153 (322)
T ss_pred EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhhee-----cCCccCCCCCCcCcccCCCh
Confidence 9999987533222233 456899999999999999874 2478999998765441 22110 11334667654333
Q ss_pred C----CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961 175 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 245 (397)
Q Consensus 175 ~----~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 245 (397)
. +...|+. |+.+.++. ++++++++++||+.|||+......++...+. .... .+.++ .+ .+.+
T Consensus 154 ~~~~~~~~~Y~~sK~~aE~~~~~~~-~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~--~~~~--~g~~~--~~--~~~~ 224 (322)
T PLN02986 154 SLCRETKNWYPLSKILAENAAWEFA-KDNGIDMVVLNPGFICGPLLQPTLNFSVELI--VDFI--NGKNL--FN--NRFY 224 (322)
T ss_pred HHhhccccchHHHHHHHHHHHHHHH-HHhCCeEEEEcccceeCCCCCCCCCccHHHH--HHHH--cCCCC--CC--CcCc
Confidence 1 1233654 55555554 5679999999999999953221112111111 1111 13332 22 2334
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961 246 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 246 ~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
.++|+. ++|++++.++..+.. ++.||++ +..+|++|+++.+.+.++.. .++. .
T Consensus 225 ~~v~v~---Dva~a~~~al~~~~~-~~~yni~-~~~~s~~e~~~~i~~~~~~~--~~~~------------~-------- 277 (322)
T PLN02986 225 RFVDVR---DVALAHIKALETPSA-NGRYIID-GPIMSVNDIIDILRELFPDL--CIAD------------T-------- 277 (322)
T ss_pred ceeEHH---HHHHHHHHHhcCccc-CCcEEEe-cCCCCHHHHHHHHHHHCCCC--CCCC------------C--------
Confidence 555554 458888887766544 3589995 56899999999999998631 1110 0
Q ss_pred hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV 396 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~ 396 (397)
-.+... ......+|++|+++|||+|+ +++|+++++++|+++.|+|
T Consensus 278 ------------~~~~~~-------------~~~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 278 ------------NEESEM-------------NEMICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred ------------Cccccc-------------cccCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 000000 00012369999999999985 9999999999999999986
No 24
>PLN02650 dihydroflavonol-4-reductase
Probab=100.00 E-value=1e-31 Score=255.84 Aligned_cols=299 Identities=15% Similarity=0.132 Sum_probs=194.8
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceEEEccCCCHHHHHHHHccCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----N----ADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----~----~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
+++|||||||||||++|+++|++ +|++|++++|+..... . ...+++++.+|++|.+.+.++++++|
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d 79 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLE-----RGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT 79 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHH-----CCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence 46899999999999999999998 8999999998753320 0 01257889999999999999999999
Q ss_pred CeeEEEEecccCCCcH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCC-CCCCCCC--
Q 015961 97 DVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP-FTEDMPR-- 172 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~-~~E~~p~-- 172 (397)
.|+|+|+.......++ .+.+++|+.|+.+++++|++.+ .+++|+++||...|+... ...+ ++|+...
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~~--------~~~~~~~E~~~~~~ 150 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVEE--------HQKPVYDEDCWSDL 150 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccCC--------CCCCccCcccCCch
Confidence 9999987533222233 4678999999999999998753 367888888765443210 0122 3444210
Q ss_pred ----C-CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961 173 ----L-DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA 242 (397)
Q Consensus 173 ----~-~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ 242 (397)
. +.+...|+. |.++..+. +++|++++++||++|||+..... ....+...+ ....+.... .+...
T Consensus 151 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRp~~v~Gp~~~~~--~~~~~~~~~--~~~~~~~~~-~~~~~ 224 (351)
T PLN02650 151 DFCRRKKMTGWMYFVSKTLAEKAAWKYA-AENGLDFISIIPTLVVGPFISTS--MPPSLITAL--SLITGNEAH-YSIIK 224 (351)
T ss_pred hhhhccccccchHHHHHHHHHHHHHHHH-HHcCCeEEEECCCceECCCCCCC--CCccHHHHH--HHhcCCccc-cCcCC
Confidence 1 111223664 55555554 66799999999999999543221 111111111 111122111 11111
Q ss_pred ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961 243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM 322 (397)
Q Consensus 243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (397)
.++++|+.| +|.+++.++..+.. ++.| ++++..+|++|+++.+.+.++....+. ...
T Consensus 225 -~r~~v~V~D---va~a~~~~l~~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~------------~~~----- 281 (351)
T PLN02650 225 -QGQFVHLDD---LCNAHIFLFEHPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYNIPA------------RFP----- 281 (351)
T ss_pred -CcceeeHHH---HHHHHHHHhcCcCc-CceE-EecCCCcCHHHHHHHHHHhCcccCCCC------------CCC-----
Confidence 235555555 47887777765433 3478 556688999999999999876321110 000
Q ss_pred ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcCCCCC
Q 015961 323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 397 (397)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~~~~~ 397 (397)
+. +... .....|++|++++||+|+++++|+|+++++|+++.+++|
T Consensus 282 --------------~~-~~~~---------------~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~ 326 (351)
T PLN02650 282 --------------GI-DEDL---------------KSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP 326 (351)
T ss_pred --------------Cc-Cccc---------------ccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 00 0000 023468999988999999999999999999999999875
No 25
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=100.00 E-value=1.6e-31 Score=254.29 Aligned_cols=300 Identities=15% Similarity=0.100 Sum_probs=201.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHccC--C
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQL--T 96 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~~~--~ 96 (397)
++|+|||||||||||++|++.|++ .|++|++++|+..... ....+++++.+|++|.+++.++++.+ |
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLE-----LGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHH-----CCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCC
Confidence 357999999999999999999999 8999999998764321 01135778999999999999988864 7
Q ss_pred CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961 97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 174 (397)
Q Consensus 97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~ 174 (397)
.|+|+|+...... .++...+++|+.++.+++++|+..+ .+++++++||..+|+.. ....++.|+.+..|
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~--------~~~~~~~e~~~~~p 148 (349)
T TIGR02622 78 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRND--------EWVWGYRETDPLGG 148 (349)
T ss_pred EEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCC--------CCCCCCccCCCCCC
Confidence 7999987543322 2667888999999999999998653 36788888876656431 01235677766655
Q ss_pred CCCcchhH-----HHHHHHHHhcC-------CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961 175 APNFYYTL-----EDILFEEVEKK-------EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA 242 (397)
Q Consensus 175 ~~~~~y~~-----e~~l~~~~~~~-------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ 242 (397)
... |+. |.++..+. ++ .+++++++||+.|||++......+...+ +... ..+.++.+ +++.
T Consensus 149 ~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~---~~~~-~~g~~~~~-~~g~ 220 (349)
T TIGR02622 149 HDP--YSSSKACAELVIASYR-SSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDV---IRAF-SSNKIVII-RNPD 220 (349)
T ss_pred CCc--chhHHHHHHHHHHHHH-HHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHH---HHHH-hcCCCeEE-CCCC
Confidence 444 553 55554443 22 3899999999999995321111222222 1111 12455444 4566
Q ss_pred ccceeeecccHHHHHHHHHHHhcC----CCCCCCceeccCC--CeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcccc
Q 015961 243 AWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRV 316 (397)
Q Consensus 243 ~~~~~~~~~da~~la~~~~~~~~~----~~~~g~~yni~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (397)
+.+.++|+.|+ |.+++.++.. +...+++|||+++ ..+|+.|++..+.+.++.....+.. .+.
T Consensus 221 ~~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~---------~~~ 288 (349)
T TIGR02622 221 ATRPWQHVLEP---LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWED---------DSD 288 (349)
T ss_pred cccceeeHHHH---HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceee---------ccC
Confidence 77788877765 5565554432 1233679999975 6899999999999887642211110 000
Q ss_pred CHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 317 KLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
+ ..+... ....+|++|+++ +||+|+++++++++++++|+++.
T Consensus 289 ~--------------------~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~ 331 (349)
T TIGR02622 289 L--------------------NHPHEA---------------RLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAW 331 (349)
T ss_pred C--------------------CCCccc---------------ceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 0 000000 034579999987 69999999999999999998753
No 26
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=100.00 E-value=5.6e-31 Score=249.60 Aligned_cols=299 Identities=15% Similarity=0.089 Sum_probs=199.2
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc--cCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QLT 96 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--~~~ 96 (397)
++|||||||||||++|+++|++ +|++|++++|...... ....++.++.+|++|.+.+..++. ++|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAID 75 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHH-----CCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCC
Confidence 3799999999999999999998 8999999986432110 012346788999999999888886 478
Q ss_pred CeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC-C
Q 015961 97 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-L 173 (397)
Q Consensus 97 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~-~ 173 (397)
.|+|+|+..... ...+.+.+++|+.++.+++++|++.+ +++++++||..+|+.. ...+++|++|. .
T Consensus 76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~yg~~---------~~~~~~E~~~~~~ 144 (338)
T PRK10675 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNLIFSSSATVYGDQ---------PKIPYVESFPTGT 144 (338)
T ss_pred EEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhhCCC---------CCCccccccCCCC
Confidence 899998654322 12456788999999999999999764 6788888876555421 24567788775 3
Q ss_pred CCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcc---h--hHHHHHHH-HHHhhhcCCCceecC---
Q 015961 174 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM---N--LVGALCVY-AAVCKHEGIPLRFPG--- 239 (397)
Q Consensus 174 ~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~---~--~~~~~~~~-~~i~~~~~~~~~~~g--- 239 (397)
|.. .|+. |+++..+.....+++++++|++.+||+.|.... . ....+..+ ..+..+...++...|
T Consensus 145 p~~--~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
T PRK10675 145 PQS--PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY 222 (338)
T ss_pred CCC--hhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcC
Confidence 433 3554 555555431234799999999999996543111 0 00111111 111211112222222
Q ss_pred ---CccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 015961 240 ---TKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ 314 (397)
Q Consensus 240 ---~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~ 314 (397)
++.+.++++|+.|+ |++++.++.. ....+++|||++++.+|++|+++.+.+.+|.+..... .
T Consensus 223 ~~~~g~~~~~~v~v~D~---a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~ 289 (338)
T PRK10675 223 PTEDGTGVRDYIHVMDL---ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHF----------A 289 (338)
T ss_pred CCCCCcEEEeeEEHHHH---HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeee----------C
Confidence 34555566666555 6666666543 2234689999999999999999999999997532210 0
Q ss_pred ccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 315 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
+. .+... ....+|++|+++ +||+|+++++++|+++++|++++
T Consensus 290 ~~----------------------~~~~~---------------~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 290 PR----------------------REGDL---------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred CC----------------------CCCch---------------hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence 00 00000 023479999986 59999999999999999999874
No 27
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=100.00 E-value=7.9e-31 Score=247.41 Aligned_cols=320 Identities=17% Similarity=0.129 Sum_probs=209.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT 105 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~ 105 (397)
++||||||+||||++|++.|++ .|++|++++|++.... ....+++++.+|++|.+++.++++++|.|+|+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLE-----QGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHH-----CCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 3799999999999999999998 8999999999765421 122368899999999999999999999999998753
Q ss_pred ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC-CcchhH--
Q 015961 106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP-NFYYTL-- 182 (397)
Q Consensus 106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~-~~~y~~-- 182 (397)
.....++...+++|+.++.++++++++.+ +++++++||..+|+.. ....+.+|+.+..+.. ...|+.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~--------~~~~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVR--------GDGTPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcC--------CCCCCcCccCCCCcccccChHHHHH
Confidence 32334677889999999999999998753 6788888876555421 1134677877765432 223654
Q ss_pred ---HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961 183 ---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 259 (397)
Q Consensus 183 ---e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~ 259 (397)
|+++.++. ...+++++++||+.+||++....... ..+. ..... .+.+ .+.+.+ ..+++ ++++|++
T Consensus 146 ~~~e~~~~~~~-~~~~~~~~ilR~~~~~G~~~~~~~~~-~~~~--~~~~~-~~~~-~~~~~~---~~~i~---v~D~a~a 213 (328)
T TIGR03466 146 FLAEQAALEMA-AEKGLPVVIVNPSTPIGPRDIKPTPT-GRII--VDFLN-GKMP-AYVDTG---LNLVH---VDDVAEG 213 (328)
T ss_pred HHHHHHHHHHH-HhcCCCEEEEeCCccCCCCCCCCCcH-HHHH--HHHHc-CCCc-eeeCCC---cceEE---HHHHHHH
Confidence 55556554 45689999999999999543222111 1111 11111 1222 222222 23444 4455777
Q ss_pred HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCC
Q 015961 260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ 339 (397)
Q Consensus 260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (397)
++.++.. ...++.||++ ++.+|++|+++.+.+.+|.+..... .|..+...+....+.+.. ..+..
T Consensus 214 ~~~~~~~-~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~ 278 (328)
T TIGR03466 214 HLLALER-GRIGERYILG-GENLTLKQILDKLAEITGRPAPRVK----------LPRWLLLPVAWGAEALAR---LTGKE 278 (328)
T ss_pred HHHHHhC-CCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCc----------CCHHHHHHHHHHHHHHHH---hcCCC
Confidence 7766655 3457788886 6889999999999999997644321 122221111111111211 11211
Q ss_pred cccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961 340 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV 396 (397)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~~ 396 (397)
+ .+. .....+...++.+|++|+++ +||+|. +++++|+++++||++.|.+
T Consensus 279 ~-~~~------~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~ 328 (328)
T TIGR03466 279 P-RVT------VDGVRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL 328 (328)
T ss_pred C-CCC------HHHHHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence 1 000 00000111256789999986 699995 9999999999999998864
No 28
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=100.00 E-value=6.3e-31 Score=250.62 Aligned_cols=310 Identities=14% Similarity=0.079 Sum_probs=204.7
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCC-CC------CCCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK-PN------WNADHLVEYVQCDVSDPEETQAKLSQ--LT 96 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~-~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~ 96 (397)
++|||||||||||++|+++|++ +|++ |++++|... .. .....+++++.+|++|.+++.+++.. +|
T Consensus 1 mkilITGgtG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIIN-----NTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPD 75 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHH-----hCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 3799999999999999999998 6765 666665321 11 00123577899999999999998874 78
Q ss_pred CeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccC-------CCcceEEEecCCccccccccccCCCC-CCC-CC
Q 015961 97 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNA-------PNLRHVCLQTGTKHYLGPFEAFGKIK-PYD-PP 165 (397)
Q Consensus 97 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~-------~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~-~~ 165 (397)
.|+|+|+..... ..++.+.+++|+.|+.+++++|++.. .++.+++++||..+|+..... .... ... .+
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~~~~~~ 154 (352)
T PRK10084 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHP-DEVENSEELPL 154 (352)
T ss_pred EEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcc-ccccccccCCC
Confidence 899998764332 22567889999999999999998641 235688888877766431000 0000 001 23
Q ss_pred CCCCCCCCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCC
Q 015961 166 FTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 240 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~ 240 (397)
++|+.+..|... |+. |+++..+. +.++++++++||+.|||+... ...+...+.. ....+.++.+.|+
T Consensus 155 ~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~vilr~~~v~Gp~~~-~~~~~~~~~~----~~~~~~~~~~~~~ 226 (352)
T PRK10084 155 FTETTAYAPSSP--YSASKASSDHLVRAWL-RTYGLPTIVTNCSNNYGPYHF-PEKLIPLVIL----NALEGKPLPIYGK 226 (352)
T ss_pred ccccCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeccceeCCCcC-ccchHHHHHH----HHhcCCCeEEeCC
Confidence 677777666544 654 55555544 567899999999999994321 1122222211 1112445566677
Q ss_pred ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE 320 (397)
Q Consensus 241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
+.+.++++|+.|+ |.+++.++.. ...+++||+++++.+|++|+++.+++.+|...+.. .+. ..
T Consensus 227 g~~~~~~v~v~D~---a~a~~~~l~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-----------~~~--~~ 289 (352)
T PRK10084 227 GDQIRDWLYVEDH---ARALYKVVTE-GKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-----------TSY--RE 289 (352)
T ss_pred CCeEEeeEEHHHH---HHHHHHHHhc-CCCCceEEeCCCCcCcHHHHHHHHHHHhccccccc-----------cch--hh
Confidence 7777777766665 7777666554 44578999999999999999999999998642210 000 00
Q ss_pred HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
. ......... ....+.+|++|+++ +||+|+++++|+|+++++|+++.
T Consensus 290 ~--------------~~~~~~~~~------------~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 290 Q--------------ITYVADRPG------------HDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred h--------------ccccccCCC------------CCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 0 000000000 00134579999986 79999999999999999999864
No 29
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=100.00 E-value=1.2e-30 Score=244.95 Aligned_cols=296 Identities=14% Similarity=0.125 Sum_probs=204.1
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCC---C----CCCCCCceEEEccCCCHHHHHHHHcc--CC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKP---N----WNADHLVEYVQCDVSDPEETQAKLSQ--LT 96 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~---~----~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~ 96 (397)
+|||||||||||++|+++|++ .| ++|++++|.... . ....++++++.+|++|++++.+++++ +|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 75 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILN-----EHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPD 75 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHH-----hCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCC
Confidence 589999999999999999997 45 789999874211 0 11123688999999999999999987 78
Q ss_pred CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961 97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 174 (397)
Q Consensus 97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~ 174 (397)
.|+|+|+...... .++...+++|+.++.+++++|.+...+. +++++||..+|++. . ...+.+|+.+..|
T Consensus 76 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~v~g~~-------~-~~~~~~e~~~~~~ 146 (317)
T TIGR01181 76 AVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEF-RFHHISTDEVYGDL-------E-KGDAFTETTPLAP 146 (317)
T ss_pred EEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEeeccceeCCC-------C-CCCCcCCCCCCCC
Confidence 8999987544322 2567788999999999999998753323 67888876666432 1 1225677776555
Q ss_pred CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 015961 175 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI 249 (397)
Q Consensus 175 ~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~ 249 (397)
... |+. |.++..+. ++.+++++++||+.+||+... ...+...+.. .+. .+.++.+.+++.+.++++|
T Consensus 147 ~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~R~~~i~G~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~g~~~~~~i~ 218 (317)
T TIGR01181 147 SSP--YSASKAASDHLVRAYH-RTYGLPALITRCSNNYGPYQF-PEKLIPLMIT--NAL--AGKPLPVYGDGQQVRDWLY 218 (317)
T ss_pred CCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCC-cccHHHHHHH--HHh--cCCCceEeCCCceEEeeEE
Confidence 433 554 55555544 567899999999999994321 1222222211 111 2445566677766666666
Q ss_pred cccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHH
Q 015961 250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW 329 (397)
Q Consensus 250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (397)
+.|+ |+++..+..+ ...+++||+++++.+|++|+++.+.+.+|.+...... ..
T Consensus 219 v~D~---a~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~-----------------~~------ 271 (317)
T TIGR01181 219 VEDH---CRAIYLVLEK-GRVGETYNIGGGNERTNLEVVETILELLGKDEDLITH-----------------VE------ 271 (317)
T ss_pred HHHH---HHHHHHHHcC-CCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccc-----------------cC------
Confidence 5554 7777666644 4457899999999999999999999999864321100 00
Q ss_pred HHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCC
Q 015961 330 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI 395 (397)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~ 395 (397)
..+ .. .....+|++|+++ +||+|.++++++++++++||+++++
T Consensus 272 ----------~~~-~~------------~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~ 315 (317)
T TIGR01181 272 ----------DRP-GH------------DRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEW 315 (317)
T ss_pred ----------CCc-cc------------hhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccC
Confidence 000 00 0022479999975 7999999999999999999998765
No 30
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=100.00 E-value=3.4e-31 Score=247.56 Aligned_cols=282 Identities=16% Similarity=0.141 Sum_probs=193.2
Q ss_pred EEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEeccc
Q 015961 30 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYVTWT 107 (397)
Q Consensus 30 LVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~~~~ 107 (397)
||||||||||++|+++|++ .|++|+++.+. ..+|++|.+++.+.++. +|.|+|+|+....
T Consensus 1 lItGa~GfiG~~l~~~L~~-----~g~~v~~~~~~-------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEA-----LGFTNLVLRTH-------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHh-----CCCcEEEeecc-------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecc
Confidence 6999999999999999998 78887766532 15899999999888875 5779999986432
Q ss_pred ---CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC----CCCCCCCcch
Q 015961 108 ---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLDAPNFYY 180 (397)
Q Consensus 108 ---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~----p~~~~~~~~y 180 (397)
...++.+.+++|+.++.+++++|++.+ +++++++||..+|+.. ...|++|++ |..|... .|
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~SS~~vyg~~---------~~~~~~E~~~~~~~~~p~~~-~Y 130 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHG--VKKLLFLGSSCIYPKF---------APQPIPETALLTGPPEPTNE-WY 130 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcC--CCeEEEeCceeecCCC---------CCCCCCHHHhccCCCCCCcc-hH
Confidence 123567788999999999999999864 7789988876655431 245677765 2223222 26
Q ss_pred hH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCC-c--chhHHHHHHHHHHhhhcCCCcee-cCCccccceeeecc
Q 015961 181 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-L--MNLVGALCVYAAVCKHEGIPLRF-PGTKAAWECYSIAS 251 (397)
Q Consensus 181 ~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~-~--~~~~~~~~~~~~i~~~~~~~~~~-~g~~~~~~~~~~~~ 251 (397)
+. |+++..+. +..+++++++||+.|||+.... . ..+...+..........+.++.+ .|++.+.++++|+.
T Consensus 131 ~~sK~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 209 (306)
T PLN02725 131 AIAKIAGIKMCQAYR-IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVD 209 (306)
T ss_pred HHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHH
Confidence 54 44444444 5678999999999999964321 1 11122221111011123555444 67777666666655
Q ss_pred cHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHH
Q 015961 252 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE 331 (397)
Q Consensus 252 da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (397)
|+ +++++.++... ..++.||++++..+|+.|+++.+.+.+|.+...... +
T Consensus 210 Dv---~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~----------~---------------- 259 (306)
T PLN02725 210 DL---ADAVVFLMRRY-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWD----------T---------------- 259 (306)
T ss_pred HH---HHHHHHHHhcc-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeec----------C----------------
Confidence 55 77777666543 334679999999999999999999999864321000 0
Q ss_pred HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961 332 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
..+.. .....+|++|++++||+|+++++|+|+++++|+++.
T Consensus 260 ------~~~~~---------------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 300 (306)
T PLN02725 260 ------SKPDG---------------TPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN 300 (306)
T ss_pred ------CCCCc---------------ccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 00000 002357999999899999999999999999999865
No 31
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=100.00 E-value=3.4e-31 Score=246.27 Aligned_cols=286 Identities=13% Similarity=0.071 Sum_probs=186.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEe
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV 104 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~ 104 (397)
|+||||||+||||++|+++|++ +| +|++++|... .+.+|++|.+.+.+++++ +|.|+|+|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~-----~g-~V~~~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAP-----LG-NLIALDVHST----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhc-----cC-CEEEeccccc----------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 3799999999999999999998 67 7999988631 246899999999988884 6889999886
Q ss_pred cccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961 105 TWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 182 (397)
Q Consensus 105 ~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~ 182 (397)
..... .++...+++|+.++.+|+++|++.+ . +++++||..+|++. ...|++|+++..|... |+.
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~-~~v~~Ss~~Vy~~~---------~~~p~~E~~~~~P~~~--Yg~ 130 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--A-WVVHYSTDYVFPGT---------GDIPWQETDATAPLNV--YGE 130 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEccceEECCC---------CCCCcCCCCCCCCCCH--HHH
Confidence 55432 2567778999999999999999865 3 57777776666432 1457888888666544 887
Q ss_pred HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCC--ccccceeeecccHHHHHHHH
Q 015961 183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT--KAAWECYSIASDADLIAEHQ 260 (397)
Q Consensus 183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~--~~~~~~~~~~~da~~la~~~ 260 (397)
.|...|........+++|+||++|||+.. .++...+ +...+ .+.++.+.++ +.+.... ++ +++++.++
T Consensus 131 sK~~~E~~~~~~~~~~~ilR~~~vyGp~~---~~~~~~~---~~~~~-~~~~~~v~~d~~g~~~~~~-~~--~d~~~~~~ 200 (299)
T PRK09987 131 TKLAGEKALQEHCAKHLIFRTSWVYAGKG---NNFAKTM---LRLAK-EREELSVINDQFGAPTGAE-LL--ADCTAHAI 200 (299)
T ss_pred HHHHHHHHHHHhCCCEEEEecceecCCCC---CCHHHHH---HHHHh-cCCCeEEeCCCcCCCCCHH-HH--HHHHHHHH
Confidence 77776655444456789999999999432 2332222 11111 2445555554 2222111 22 23344444
Q ss_pred HHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCc
Q 015961 261 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQP 340 (397)
Q Consensus 261 ~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (397)
..++.. ...+++||+++++.+|+.|+++.+.+.++......+.. .-.+.+... +....
T Consensus 201 ~~~~~~-~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~------~i~~~~~~~---------------~~~~~ 258 (299)
T PRK09987 201 RVALNK-PEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALN------KLNAVPTSA---------------YPTPA 258 (299)
T ss_pred HHhhcc-CCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcC------eeeecchhh---------------cCCCC
Confidence 433322 22346999999999999999999988654321100000 000111110 10000
Q ss_pred ccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHH
Q 015961 341 TRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV 390 (397)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~ 390 (397)
.+ -.+..+|++|+++ +||+| .+++|+|+++++.+
T Consensus 259 ---~r------------p~~~~ld~~k~~~~lg~~~-~~~~~~l~~~~~~~ 293 (299)
T PRK09987 259 ---RR------------PHNSRLNTEKFQQNFALVL-PDWQVGVKRMLTEL 293 (299)
T ss_pred ---CC------------CCcccCCHHHHHHHhCCCC-ccHHHHHHHHHHHH
Confidence 00 0145689999997 69997 49999999999865
No 32
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.1e-30 Score=242.97 Aligned_cols=296 Identities=20% Similarity=0.221 Sum_probs=207.8
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC-CCeeEEEEecc
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL-TDVTHIFYVTW 106 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~V~h~a~~~~ 106 (397)
+|||||||||||++|+++|++ +||+|++++|..........+++++.+|++|.+.+...+..+ |.|+|+|+...
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~ 76 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLA-----AGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSS 76 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHh-----CCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCc
Confidence 499999999999999999999 899999999976543221146889999999998888888888 89999998765
Q ss_pred cCCC---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC-CCCCCCCCcchhH
Q 015961 107 TNRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED-MPRLDAPNFYYTL 182 (397)
Q Consensus 107 ~~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~-~p~~~~~~~~y~~ 182 (397)
.... ++.+.+++|+.++.+++++|++. .++++++.||..+|+.. ....+++|+ .|..|.. .|+.
T Consensus 77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~--------~~~~~~~E~~~~~~p~~--~Yg~ 144 (314)
T COG0451 77 VPDSNASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGD--------PPPLPIDEDLGPPRPLN--PYGV 144 (314)
T ss_pred hhhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCC--------CCCCCcccccCCCCCCC--HHHH
Confidence 4433 24568999999999999999983 48888886654434321 123367787 4555544 4764
Q ss_pred -----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcch--hHHHHHHHHHHhhhcCCC-ceecCCccccceeeecccHH
Q 015961 183 -----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN--LVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSIASDAD 254 (397)
Q Consensus 183 -----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~~~da~ 254 (397)
|+++..+. +..+++++++||+.|||++.....+ +...+ ...+. .+.+ +.+.+++.+.+.++++.|
T Consensus 145 sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~i~v~D-- 217 (314)
T COG0451 145 SKLAAEQLLRAYA-RLYGLPVVILRPFNVYGPGDKPDLSSGVVSAF--IRQLL--KGEPIIVIGGDGSQTRDFVYVDD-- 217 (314)
T ss_pred HHHHHHHHHHHHH-HHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHH--HHHHH--hCCCcceEeCCCceeEeeEeHHH--
Confidence 55555554 4567999999999999954322111 11111 11112 2444 455666665556666555
Q ss_pred HHHHHHHHHhcCCCCCCCceeccCCC-eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHH
Q 015961 255 LIAEHQIWAAVDPYAKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV 333 (397)
Q Consensus 255 ~la~~~~~~~~~~~~~g~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (397)
++.+++.++.++... +||++++. ..+++|+++.+.+.+|.....+.. ...
T Consensus 218 -~a~~~~~~~~~~~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-----------~~~--------------- 268 (314)
T COG0451 218 -VADALLLALENPDGG--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVY-----------IPL--------------- 268 (314)
T ss_pred -HHHHHHHHHhCCCCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceee-----------cCC---------------
Confidence 477777777654444 89999997 899999999999999987442110 000
Q ss_pred HHhCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHHHhcCC
Q 015961 334 RENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFK 394 (397)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~~~~ 394 (397)
.... .......+|.+|++ ++||.|..++++++.++++|+....
T Consensus 269 -----~~~~-------------~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 269 -----GRRG-------------DLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred -----CCCC-------------cccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 0000 01114457999998 5799999999999999999987654
No 33
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.98 E-value=1.8e-30 Score=247.33 Aligned_cols=305 Identities=14% Similarity=0.174 Sum_probs=194.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
+++||||||+||||++|+++|++ +|++|++++|+.... +....+++++.+|++|.+.+.+++.++|.|+
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQ-----RGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 46899999999999999999999 899999999875321 1112468899999999999999999999999
Q ss_pred EEEEecccCC----CcHHH-----HHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961 100 HIFYVTWTNR----STEAE-----NCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 170 (397)
Q Consensus 100 h~a~~~~~~~----~~~~~-----~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~ 170 (397)
|+|+...... .++.. .+++|+.|+.+++++|++.. .+++|+++||..+|+... .-|. ...+++|+.
T Consensus 85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~-~~~~---~~~~~~E~~ 159 (353)
T PLN02896 85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKD-SNGR---WRAVVDETC 159 (353)
T ss_pred ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccc-cCCC---CCCccCccc
Confidence 9988643321 13333 34556799999999998753 367899888777665320 0010 013455552
Q ss_pred C--CC----C-CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC--ce
Q 015961 171 P--RL----D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP--LR 236 (397)
Q Consensus 171 p--~~----~-~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 236 (397)
+ .. + .+...|+. |+++..+. +..+++++++||++|||+......+. .+...+... .+.+ ..
T Consensus 160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~--~~~~~~~~~--~g~~~~~~ 234 (353)
T PLN02896 160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYA-KENGIDLVSVITTTVAGPFLTPSVPS--SIQVLLSPI--TGDSKLFS 234 (353)
T ss_pred CCcHHHhhccCCCCccHHHHHHHHHHHHHHHH-HHcCCeEEEEcCCcccCCCcCCCCCc--hHHHHHHHh--cCCccccc
Confidence 2 10 0 11223664 55555554 66789999999999999533211111 111111111 1222 11
Q ss_pred ecCCccc---cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCc
Q 015961 237 FPGTKAA---WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGT 313 (397)
Q Consensus 237 ~~g~~~~---~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~ 313 (397)
..+.... .++++|+ +++|++++.++..+. .++.||+ ++..+|++|+++.+.+.++.....+.
T Consensus 235 ~~~~~~~~~~~~dfi~v---~Dva~a~~~~l~~~~-~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~---------- 299 (353)
T PLN02896 235 ILSAVNSRMGSIALVHI---EDICDAHIFLMEQTK-AEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVR---------- 299 (353)
T ss_pred cccccccccCceeEEeH---HHHHHHHHHHHhCCC-cCccEEe-cCCCCCHHHHHHHHHHhCCCCCcccc----------
Confidence 1111111 1244444 445777777765433 3456865 56789999999999998863211100
Q ss_pred cccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccCCHHHHHHHHHHHhcC
Q 015961 314 QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
+. +... ..+ ....|.+|++++||+|.++++++|+++++|+++.
T Consensus 300 ----------------------~~--~~~~---~~~----------~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~ 342 (353)
T PLN02896 300 ----------------------LD--EEKR---GSI----------PSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDH 342 (353)
T ss_pred ----------------------cc--cccc---Ccc----------ccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHC
Confidence 00 0000 000 1235899999999999999999999999999999
Q ss_pred CCCC
Q 015961 394 KIVP 397 (397)
Q Consensus 394 ~~~~ 397 (397)
+.+|
T Consensus 343 ~~~~ 346 (353)
T PLN02896 343 GFLP 346 (353)
T ss_pred CCCC
Confidence 8765
No 34
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.98 E-value=9.7e-31 Score=239.50 Aligned_cols=250 Identities=21% Similarity=0.238 Sum_probs=172.3
Q ss_pred EEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961 30 LIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 103 (397)
Q Consensus 30 LVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~ 103 (397)
|||||+||||++|+++|++ +| ++|+++++.+.... ......+++++|++|++++.++++++|.|+|+|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~-----~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLE-----RGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHHH-----CCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence 7999999999999999999 77 78999998765432 1122334999999999999999999999999988
Q ss_pred ecccCC-CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961 104 VTWTNR-STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 182 (397)
Q Consensus 104 ~~~~~~-~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~ 182 (397)
...... .+++.++++|+.||+|++++|++. ++++++++||..++... ..+. .-...+|+.|..+.....|+.
T Consensus 76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~--~~~~---~~~~~dE~~~~~~~~~~~Y~~ 148 (280)
T PF01073_consen 76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDN--YKGD---PIINGDEDTPYPSSPLDPYAE 148 (280)
T ss_pred cccccCcccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEec--cCCC---CcccCCcCCcccccccCchHH
Confidence 654433 367789999999999999999986 49999999977665431 0110 011235555543333344776
Q ss_pred HHHHHHHHh---cC------CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccH
Q 015961 183 EDILFEEVE---KK------EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDA 253 (397)
Q Consensus 183 e~~l~~~~~---~~------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da 253 (397)
+|.++|... .. ..+.+++|||+.|||++........... .+ .+......|.+.....++ ++
T Consensus 149 SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~------~~-~g~~~~~~g~~~~~~~~v---yV 218 (280)
T PF01073_consen 149 SKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM------VR-SGLFLFQIGDGNNLFDFV---YV 218 (280)
T ss_pred HHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH------HH-hcccceeecCCCceECcE---eH
Confidence 554444321 12 2399999999999995433222222111 11 233334455555444444 44
Q ss_pred HHHHHHHHHHhc---C----CCCCCCceeccCCCeee-hHHHHHHHHHHhCCCCCC
Q 015961 254 DLIAEHQIWAAV---D----PYAKNEAFNCNNGDVFK-WKHLWKVLAEQFGIEDYG 301 (397)
Q Consensus 254 ~~la~~~~~~~~---~----~~~~g~~yni~~~~~~s-~~el~~~i~~~~g~~~~~ 301 (397)
.++|.+++.++. . ....|++|+|+++++++ +.|++..+.+.+|.+.+.
T Consensus 219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred HHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 444666665543 1 34679999999999998 999999999999988654
No 35
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.98 E-value=1.6e-30 Score=224.92 Aligned_cols=291 Identities=19% Similarity=0.200 Sum_probs=204.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC------CCCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------NWNADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~------~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
+...++|+||||.||||||||+.|.. +||+|++++..-.. .+...++++.+.-|+..+ .+..+|
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~-----egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD 93 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMT-----EGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVD 93 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHh-----cCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhh
Confidence 44558999999999999999999998 89999999974321 133446777777777554 678889
Q ss_pred CeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC-
Q 015961 97 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL- 173 (397)
Q Consensus 97 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~- 173 (397)
.|+|+|+.+.... .+|...+.+|+.++.+++..|++.+ .++++.||. ++||. +...|..|+....
T Consensus 94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aSTs-------eVYgd--p~~hpq~e~ywg~v 161 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTS-------EVYGD--PLVHPQVETYWGNV 161 (350)
T ss_pred hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEeecc-------cccCC--cccCCCcccccccc
Confidence 9999998766543 2788889999999999999999865 556655543 46665 2355655554322
Q ss_pred -CC-CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961 174 -DA-PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC 246 (397)
Q Consensus 174 -~~-~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~ 246 (397)
|. +...|.. |.++-.|. ++.|+.+.|.|+.+.|||... ++-...++.|.. ..-.+.|+...|++.|.++
T Consensus 162 npigpr~cydegKr~aE~L~~~y~-k~~giE~rIaRifNtyGPrm~--~~dgrvvsnf~~-q~lr~epltv~g~G~qtRS 237 (350)
T KOG1429|consen 162 NPIGPRSCYDEGKRVAETLCYAYH-KQEGIEVRIARIFNTYGPRMH--MDDGRVVSNFIA-QALRGEPLTVYGDGKQTRS 237 (350)
T ss_pred CcCCchhhhhHHHHHHHHHHHHhh-cccCcEEEEEeeecccCCccc--cCCChhhHHHHH-HHhcCCCeEEEcCCcceEE
Confidence 21 2233654 44444444 788999999999999995322 211122222221 1112678888999999999
Q ss_pred eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCC-CCchhhcCCCCccccCHHHHhccc
Q 015961 247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG-LSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
|.++.|. .+.++.+..++. .+.+||++++-+|+.||++++.+..|-.... +..
T Consensus 238 F~yvsD~---Vegll~Lm~s~~--~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~--------------------- 291 (350)
T KOG1429|consen 238 FQYVSDL---VEGLLRLMESDY--RGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVE--------------------- 291 (350)
T ss_pred EEeHHHH---HHHHHHHhcCCC--cCCcccCCccceeHHHHHHHHHHHcCCCcceeecC---------------------
Confidence 9998887 566666554433 3449999999999999999999988543221 100
Q ss_pred hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhc
Q 015961 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 392 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~ 392 (397)
-+-+. + ..+..|++||++ |||.|..+++|+|..++.|+|+
T Consensus 292 ----------~~~Dd-p----------------~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~ 332 (350)
T KOG1429|consen 292 ----------NGPDD-P----------------RKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE 332 (350)
T ss_pred ----------CCCCC-c----------------cccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence 00000 0 033479999997 6999999999999999999975
No 36
>PLN00016 RNA-binding protein; Provisional
Probab=99.97 E-value=8.9e-31 Score=251.44 Aligned_cols=294 Identities=18% Similarity=0.138 Sum_probs=195.7
Q ss_pred CccCCCCCEEEEE----cCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceEEEccCC
Q 015961 20 EPARSYQSVALIV----GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------------NADHLVEYVQCDVS 83 (397)
Q Consensus 20 ~~~~~~~~~ILVt----GatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v~~~~~Dl~ 83 (397)
..+..|+++|||| |||||||++|+++|++ +||+|++++|+..... ....+++++.+|+.
T Consensus 46 ~~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~ 120 (378)
T PLN00016 46 AAAAVEKKKVLIVNTNSGGHAFIGFYLAKELVK-----AGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPA 120 (378)
T ss_pred hhcccccceEEEEeccCCCceeEhHHHHHHHHH-----CCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHH
Confidence 3344566899999 9999999999999999 8999999999764310 01235889999997
Q ss_pred CHHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961 84 DPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 84 d~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
|.+++. ...++|.|+|+++ .++.++++++++|++.+ +++|+++||..+|+.. ..
T Consensus 121 d~~~~~-~~~~~d~Vi~~~~--------------~~~~~~~~ll~aa~~~g--vkr~V~~SS~~vyg~~---------~~ 174 (378)
T PLN00016 121 DVKSKV-AGAGFDVVYDNNG--------------KDLDEVEPVADWAKSPG--LKQFLFCSSAGVYKKS---------DE 174 (378)
T ss_pred HHHhhh-ccCCccEEEeCCC--------------CCHHHHHHHHHHHHHcC--CCEEEEEccHhhcCCC---------CC
Confidence 733322 2246788888732 12457889999999764 8899998876655421 13
Q ss_pred CCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 015961 164 PPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA 243 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~ 243 (397)
.|..|+.+..|.. .....|+++ ++.+++++++||+++||+ +........+. ..+. .+.++.++|++.+
T Consensus 175 ~p~~E~~~~~p~~-sK~~~E~~l-----~~~~l~~~ilRp~~vyG~--~~~~~~~~~~~--~~~~--~~~~i~~~g~g~~ 242 (378)
T PLN00016 175 PPHVEGDAVKPKA-GHLEVEAYL-----QKLGVNWTSFRPQYIYGP--GNNKDCEEWFF--DRLV--RGRPVPIPGSGIQ 242 (378)
T ss_pred CCCCCCCcCCCcc-hHHHHHHHH-----HHcCCCeEEEeceeEECC--CCCCchHHHHH--HHHH--cCCceeecCCCCe
Confidence 4556666654432 222234433 456899999999999994 32222211111 1112 2556667777766
Q ss_pred cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhc
Q 015961 244 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK 323 (397)
Q Consensus 244 ~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (397)
...++|+.| +|.+++.++.++...+++||+++++.+|+.|+++.+++.+|.+..... .+...+
T Consensus 243 ~~~~i~v~D---va~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~------------~~~~~~-- 305 (378)
T PLN00016 243 LTQLGHVKD---LASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVH------------YDPKAV-- 305 (378)
T ss_pred eeceecHHH---HHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceee------------cCcccc--
Confidence 655655544 577877777666566799999999999999999999999997642210 010000
Q ss_pred cchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcCCCC
Q 015961 324 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV 396 (397)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~~~~ 396 (397)
. .+... . +. +...+..+|++|+++ |||+|+++++|+|+++++||++.|.+
T Consensus 306 ~-----------~~~~~-~------~p-----~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 306 G-----------FGAKK-A------FP-----FRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred C-----------ccccc-c------cc-----ccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 0 00000 0 00 000134579999986 69999999999999999999998865
No 37
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.97 E-value=3.1e-30 Score=241.99 Aligned_cols=291 Identities=11% Similarity=0.080 Sum_probs=188.4
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc----cCCCeeEEEE
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHIFY 103 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~----~~~~V~h~a~ 103 (397)
|||||||||||++|+++|++ .|+ +|++++|..............+.+|+.+.+.++.+.. ++|.|+|+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNE-----RGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHH-----cCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 69999999999999999998 787 7888887543221110112356788888877766553 6888999998
Q ss_pred ecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCC-CCCCCcchhH
Q 015961 104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-LDAPNFYYTL 182 (397)
Q Consensus 104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~-~~~~~~~y~~ 182 (397)
.......++...+++|+.++.+++++|++.+ + +++++||..+|+ .. ..+.+|+++. .|.. .|+.
T Consensus 76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~-~~v~~SS~~vy~-------~~---~~~~~e~~~~~~p~~--~Y~~ 140 (314)
T TIGR02197 76 CSDTTETDGEYMMENNYQYSKRLLDWCAEKG--I-PFIYASSAATYG-------DG---EAGFREGRELERPLN--VYGY 140 (314)
T ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHhC--C-cEEEEccHHhcC-------CC---CCCcccccCcCCCCC--HHHH
Confidence 6443344677788999999999999998864 3 578787665553 21 2345555543 2333 3665
Q ss_pred -----HHHHHHHHhc-CCCeeEEEEcCCceeeccCCCcc---hhHHHHHHHHHHhhhcCCCceec------CCcccccee
Q 015961 183 -----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFP------GTKAAWECY 247 (397)
Q Consensus 183 -----e~~l~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~------g~~~~~~~~ 247 (397)
|+++.++..+ ..+++++++||+.|||+...... ++...+. ..+. .+.++... +++.+.+++
T Consensus 141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~g~~~~~~ 216 (314)
T TIGR02197 141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLF--NQIK--AGGNVKLFKSSEGFKDGEQLRDF 216 (314)
T ss_pred HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHH--HHHh--cCCCeEEecCccccCCCCceeee
Confidence 4444443212 34579999999999995432111 1111111 1111 23333322 345555666
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961 248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 327 (397)
Q Consensus 248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (397)
+|+.|+ +++++.++.. ..+++||+++++++|++|+++.+.+.+|.+..... .+.+ .
T Consensus 217 i~v~D~---a~~i~~~~~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~--~------- 272 (314)
T TIGR02197 217 VYVKDV---VDVNLWLLEN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEY----------IPMP--E------- 272 (314)
T ss_pred EEHHHH---HHHHHHHHhc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCccee----------ccCc--c-------
Confidence 666665 7777766654 45679999999999999999999999997532100 0000 0
Q ss_pred HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHh
Q 015961 328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK 391 (397)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~ 391 (397)
..... + .....+|++|+++ +||+|+++++|+++++++|++
T Consensus 273 -------------~~~~~---~--------~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 273 -------------ALRGK---Y--------QYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred -------------ccccc---c--------ccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 00000 0 0023479999987 499999999999999999986
No 38
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.97 E-value=5.2e-30 Score=237.36 Aligned_cols=280 Identities=16% Similarity=0.147 Sum_probs=192.0
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEec
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT 105 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~~ 105 (397)
+|||||||||||++|+++|++ +|++|++++|. .+|+.|.+++.++++++ |.|+|+++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~-----~g~~v~~~~r~--------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSP-----EGRVVVALTSS--------------QLDLTDPEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHh-----cCCEEEEeCCc--------------ccCCCCHHHHHHHHHhCCCCEEEECCccc
Confidence 589999999999999999998 89999999985 57999999999999876 7799998754
Q ss_pred ccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHH
Q 015961 106 WTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE 183 (397)
Q Consensus 106 ~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e 183 (397)
.... ..+...+++|+.++.+++++|++.+ . +++++||..+|+.. ...+++|+++..|.. .|+..
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~v~~Ss~~vy~~~---------~~~~~~E~~~~~~~~--~Y~~~ 127 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHG--A-RLVHISTDYVFDGE---------GKRPYREDDATNPLN--VYGQS 127 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEeeeeeecCC---------CCCCCCCCCCCCCcc--hhhHH
Confidence 3221 2466788999999999999998754 2 67878766555321 245778888765543 48877
Q ss_pred HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 015961 184 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA 263 (397)
Q Consensus 184 ~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~ 263 (397)
|...|...+..+++++++||+.|||+. ...++...+... +. .+.++...++ ++..++ +++++|.+++.+
T Consensus 128 K~~~E~~~~~~~~~~~ilR~~~v~G~~--~~~~~~~~~~~~--~~--~~~~~~~~~~--~~~~~v---~v~Dva~a~~~~ 196 (287)
T TIGR01214 128 KLAGEQAIRAAGPNALIVRTSWLYGGG--GGRNFVRTMLRL--AG--RGEELRVVDD--QIGSPT---YAKDLARVIAAL 196 (287)
T ss_pred HHHHHHHHHHhCCCeEEEEeeecccCC--CCCCHHHHHHHH--hh--cCCCceEecC--CCcCCc---CHHHHHHHHHHH
Confidence 777665445567899999999999954 223333222111 11 1334444443 233444 445557787777
Q ss_pred hcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccc
Q 015961 264 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL 343 (397)
Q Consensus 264 ~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
+..+...+++||+++++.+|+.|+++.+++.+|.+....+. +. +.... ...+. . +.
T Consensus 197 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~------------~~---~~~~~------~~~~~--~-~~ 252 (287)
T TIGR01214 197 LQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHP------------QE---VKPIS------SKEYP--R-PA 252 (287)
T ss_pred HhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccC------------ce---eEeec------HHHcC--C-CC
Confidence 76554568899999999999999999999999976432211 00 00000 00000 0 00
Q ss_pred cccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHH
Q 015961 344 DEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID 388 (397)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~ 388 (397)
.. .....+|++|+|+ +|| +.++++++++++++
T Consensus 253 ~~------------~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~ 285 (287)
T TIGR01214 253 RR------------PAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ 285 (287)
T ss_pred CC------------CCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence 00 0134589999997 599 56899999998875
No 39
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.97 E-value=1.2e-29 Score=233.62 Aligned_cols=327 Identities=16% Similarity=0.125 Sum_probs=212.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-CCC------CCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NWN------ADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~~~------~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
+.++|||||+||+|.||+++|++.. ...+|++++..+.. .+. ....++++++|+.|...+..+++++ .|
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~---~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V 79 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENE---LKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VV 79 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcc---cccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence 4689999999999999999999832 13789999987642 211 1467889999999999999999999 88
Q ss_pred eEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 015961 99 THIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP 176 (397)
Q Consensus 99 ~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~ 176 (397)
+|+|+...... .+++..+++|+.||+|++++|++.+ +++++++||..+...... ....+|+.|.....
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~--v~~lIYtSs~~Vvf~g~~--------~~n~~E~~p~p~~~ 149 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG--VKRLIYTSSAYVVFGGEP--------IINGDESLPYPLKH 149 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhC--CCEEEEecCceEEeCCee--------cccCCCCCCCcccc
Confidence 88877533322 2578889999999999999999875 899999987665532211 12234554432211
Q ss_pred CcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce---ee
Q 015961 177 NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC---YS 248 (397)
Q Consensus 177 ~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~---~~ 248 (397)
...|+. |+++.++. ...++..++|||..|||++...... .+... .+ .+..+...|....+.+ ..
T Consensus 150 ~d~Y~~sKa~aE~~Vl~an-~~~~l~T~aLR~~~IYGpgd~~~~~---~i~~~---~~-~g~~~f~~g~~~~~~~~~~~~ 221 (361)
T KOG1430|consen 150 IDPYGESKALAEKLVLEAN-GSDDLYTCALRPPGIYGPGDKRLLP---KIVEA---LK-NGGFLFKIGDGENLNDFTYGE 221 (361)
T ss_pred ccccchHHHHHHHHHHHhc-CCCCeeEEEEccccccCCCCccccH---HHHHH---HH-ccCceEEeeccccccceEEec
Confidence 224665 44444432 2345999999999999944332222 22111 12 2333233444433333 33
Q ss_pred ecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHH
Q 015961 249 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV 328 (397)
Q Consensus 249 ~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (397)
.++.+..+|...+.. ..+...|+.|+|+++.++...+++..+.+.+|...+.... .|..+..+++-..+.
T Consensus 222 Nva~ahilA~~aL~~-~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~---------~p~~l~~~~~~l~e~ 291 (361)
T KOG1430|consen 222 NVAWAHILAARALLD-KSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIK---------LPLFLSYFLAYLLEI 291 (361)
T ss_pred hhHHHHHHHHHHHHh-cCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceee---------cchHHHHHHHHHHHH
Confidence 344455444433321 4567789999999999988778888999999987662111 456666666654444
Q ss_pred HHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 329 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
-.++... . ...+.. ....+......+|.+||+. |||.|..+++|++.+++.|+..+
T Consensus 292 ~~~~l~p--~-~p~lt~------~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~ 348 (361)
T KOG1430|consen 292 VYFLLRP--Y-QPILTR------FRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE 348 (361)
T ss_pred HHHhccC--C-CCCcCh------hheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence 3333221 1 111111 0011111256789999985 79999999999999999988654
No 40
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.97 E-value=2.5e-29 Score=222.86 Aligned_cols=301 Identities=17% Similarity=0.146 Sum_probs=211.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHcc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQ 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~ 94 (397)
+.++||||||+||||+|.+-+|++ +|++|++++.-.... ..+..+|.++++|+.|.+.|++.++.
T Consensus 1 ~~~~VLVtGgaGyiGsht~l~L~~-----~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~ 75 (343)
T KOG1371|consen 1 GGKHVLVTGGAGYIGSHTVLALLK-----RGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE 75 (343)
T ss_pred CCcEEEEecCCcceehHHHHHHHh-----CCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence 457999999999999999999999 899999999632211 11236899999999999999999976
Q ss_pred --CCCeeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961 95 --LTDVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 170 (397)
Q Consensus 95 --~~~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~ 170 (397)
.|.|+|+|+......+ +|..++..|+.||.|||++|++++ ++++++.||+. +||. +...|++|+.
T Consensus 76 ~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssat-------vYG~--p~~ip~te~~ 144 (343)
T KOG1371|consen 76 VKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSAT-------VYGL--PTKVPITEED 144 (343)
T ss_pred cCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC--CceEEEeccee-------eecC--cceeeccCcC
Confidence 5569999988776554 778889999999999999999975 88898877655 5553 2468999999
Q ss_pred CCC-CCCCc---chhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCC---------cchhHHHHHHHHHHhhh-----cC
Q 015961 171 PRL-DAPNF---YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKH-----EG 232 (397)
Q Consensus 171 p~~-~~~~~---~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~-----~~ 232 (397)
|.. |.++| .|..|+++..+. ...++.++.||..+++|..|.. ..++.. .....++-+. .+
T Consensus 145 ~t~~p~~pyg~tK~~iE~i~~d~~-~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g 222 (343)
T KOG1371|consen 145 PTDQPTNPYGKTKKAIEEIIHDYN-KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVG 222 (343)
T ss_pred CCCCCCCcchhhhHHHHHHHHhhh-ccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeec
Confidence 877 65552 233477777665 5666999999999999943311 112221 1111111111 12
Q ss_pred CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCC
Q 015961 233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGG 310 (397)
Q Consensus 233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~ 310 (397)
.+.... +++..+.++++.| +|+..+.++.... ..-++||++++...++.+|+..+++..|.+.+...
T Consensus 223 ~d~~t~-dgt~vrdyi~v~D---la~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~------- 291 (343)
T KOG1371|consen 223 RDYTTI-DGTIVRDYIHVLD---LADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKV------- 291 (343)
T ss_pred Cccccc-CCCeeecceeeEe---hHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccc-------
Confidence 232221 2233344444444 4667666665433 23459999999999999999999999998755311
Q ss_pred CCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHH
Q 015961 311 GGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDK 389 (397)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~ 389 (397)
+. + +.. |. ..++.+.++++ ||||+|.++++|++++..+|
T Consensus 292 -----v~---------------------------~-R~g---dv----~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W 331 (343)
T KOG1371|consen 292 -----VP---------------------------R-RNG---DV----AFVYANPSKAQRELGWKAKYGLQEMLKDLWRW 331 (343)
T ss_pred -----cC---------------------------C-CCC---Cc----eeeeeChHHHHHHhCCccccCHHHHHHHHHHH
Confidence 00 0 000 00 14567888886 68999999999999999999
Q ss_pred HhcCC
Q 015961 390 VKGFK 394 (397)
Q Consensus 390 ~~~~~ 394 (397)
+.+.-
T Consensus 332 ~~~np 336 (343)
T KOG1371|consen 332 QKQNP 336 (343)
T ss_pred HhcCC
Confidence 98763
No 41
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.96 E-value=2.6e-28 Score=230.02 Aligned_cols=297 Identities=18% Similarity=0.136 Sum_probs=196.3
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCC---CCCceEEEccCCCHHHHHHHHc--cCCCee
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNA---DHLVEYVQCDVSDPEETQAKLS--QLTDVT 99 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~---~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~ 99 (397)
+|||||||||||++|+++|++ .|++|++++|..... ... ..+++++.+|+.+.+++.+++. .+|.|+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLE-----SGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHh-----CCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 589999999999999999998 899999887643221 110 1156788999999999988886 477899
Q ss_pred EEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 015961 100 HIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN 177 (397)
Q Consensus 100 h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~ 177 (397)
|+|+...... .++.+.++.|+.++.+++++|.+.+ +.+++++||..+|+.. ...+++|+++..|...
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~ss~~~~g~~---------~~~~~~e~~~~~~~~~ 144 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG--VKKFIFSSSAAVYGEP---------SSIPISEDSPLGPINP 144 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC--CCEEEEecchhhcCCC---------CCCCccccCCCCCCCc
Confidence 9987543221 2456778999999999999998753 6788888876555321 1346778877665444
Q ss_pred cchhH-----HHHHHHHHhcC-CCeeEEEEcCCceeeccCCCcc----hhHHHHHHHH-HHhhhcCCCceecC------C
Q 015961 178 FYYTL-----EDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLM----NLVGALCVYA-AVCKHEGIPLRFPG------T 240 (397)
Q Consensus 178 ~~y~~-----e~~l~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~-~i~~~~~~~~~~~g------~ 240 (397)
|+. |.++..+. ++ .+++++++||+.+||+.+.... .....+..++ ....+...++...| +
T Consensus 145 --y~~sK~~~e~~~~~~~-~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (328)
T TIGR01179 145 --YGRSKLMSERILRDLS-KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPD 221 (328)
T ss_pred --hHHHHHHHHHHHHHHH-HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCC
Confidence 543 55555554 44 7899999999999996443210 0001111111 11111222332222 3
Q ss_pred ccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCH
Q 015961 241 KAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL 318 (397)
Q Consensus 241 ~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 318 (397)
+.+.+.++++.|+ +++++.++.. ....+++||++++..+|++|+++.+++.+|.+...... +.
T Consensus 222 g~~~~~~v~~~D~---a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~----------~~-- 286 (328)
T TIGR01179 222 GTCVRDYIHVMDL---ADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELA----------PR-- 286 (328)
T ss_pred CceEEeeeeHHHH---HHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeC----------CC--
Confidence 3334455555555 6665555432 22457899999999999999999999999976432100 00
Q ss_pred HHHhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccC-CHHHHHHHHHHHhcC
Q 015961 319 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRN-SKNSFITWIDKVKGF 393 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~-~~e~~~~~~~~~~~~ 393 (397)
.... .....+|++|+++ +||+|.++ ++++++++++|++++
T Consensus 287 --------------------~~~~---------------~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 287 --------------------RPGD---------------PASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred --------------------CCcc---------------ccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 0000 0033469999986 69999998 999999999999864
No 42
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=2.6e-28 Score=211.45 Aligned_cols=316 Identities=16% Similarity=0.148 Sum_probs=214.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
|.|+.||||-||+-|++|++.|++ +||+|+++.|+.... ...++++.++.+|++|...+..+++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLe-----kGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLE-----KGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHh-----cCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 568999999999999999999999 899999999974321 1133458899999999999999999
Q ss_pred cCCC--eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961 94 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED 169 (397)
Q Consensus 94 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~ 169 (397)
.+.+ |+|+|+++++..+ .|....+++..||.+||+|+|..+++-.+|.. .|+++.||.. .+.|.+|+
T Consensus 76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQ-------AStSE~fG~v--~~~pq~E~ 146 (345)
T COG1089 76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQ-------ASTSELYGLV--QEIPQKET 146 (345)
T ss_pred hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEe-------cccHHhhcCc--ccCccccC
Confidence 8776 9999999887655 78888899999999999999987642233332 4667788875 47899999
Q ss_pred CCCCCCCCcchhHHHHHHHHH----hcCCCeeEEEEcCCceeec-cCCCcchh-HHHHHHHHH-HhhhcCCCceecCCcc
Q 015961 170 MPRLDAPNFYYTLEDILFEEV----EKKEELSWSVHRPDTIFGF-SPYSLMNL-VGALCVYAA-VCKHEGIPLRFPGTKA 242 (397)
Q Consensus 170 ~p~~~~~~~~y~~e~~l~~~~----~~~~g~~~~ilRp~~v~G~-~~~~~~~~-~~~~~~~~~-i~~~~~~~~~~~g~~~ 242 (397)
+|+.|.++ |+..|+.+-+. .+.+|+-.+.= ..|-. +|..+..| ...+...++ |..++.. ....|+.+
T Consensus 147 TPFyPrSP--YAvAKlYa~W~tvNYResYgl~AcnG---ILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~-~l~lGNld 220 (345)
T COG1089 147 TPFYPRSP--YAVAKLYAYWITVNYRESYGLFACNG---ILFNHESPLRGETFVTRKITRAVARIKLGLQD-KLYLGNLD 220 (345)
T ss_pred CCCCCCCH--HHHHHHHHHheeeehHhhcCceeecc---eeecCCCCCCccceehHHHHHHHHHHHccccc-eEEecccc
Confidence 99999877 88877776543 24456544432 23332 24444455 344544443 4444333 36689888
Q ss_pred ccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHh
Q 015961 243 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM 322 (397)
Q Consensus 243 ~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (397)
..+++.+..|. +++ +|++++... .+.|.|++|+..|++|++++..+..|....-... +..+ .-.+
T Consensus 221 AkRDWG~A~DY---Ve~-mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~----g~~e-~g~d----- 285 (345)
T COG1089 221 AKRDWGHAKDY---VEA-MWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGT----GVDE-KGVD----- 285 (345)
T ss_pred ccccccchHHH---HHH-HHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeec----cccc-cccc-----
Confidence 77766655554 555 455555443 6779999999999999999999999965321000 0000 0000
Q ss_pred ccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHH-HcCCCCccCCHHHHHHHHHHHh
Q 015961 323 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVK 391 (397)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~~~~~~~~~~ 391 (397)
.+.|-..-.++. +-+-. ...+-.+.|.+||+ +|||+|.++++|.+++++++..
T Consensus 286 -----------a~~G~~~V~idp-~~fRP----aEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl 339 (345)
T COG1089 286 -----------AKTGKIIVEIDP-RYFRP----AEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADL 339 (345)
T ss_pred -----------cccCceeEEECc-cccCc----hhhhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHH
Confidence 000100001100 00000 01114567999998 5899999999999999998753
No 43
>PLN02686 cinnamoyl-CoA reductase
Probab=99.96 E-value=1.7e-28 Score=234.19 Aligned_cols=269 Identities=14% Similarity=0.163 Sum_probs=174.3
Q ss_pred cccccccccccccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CC-------C
Q 015961 4 WWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-------A 71 (397)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-------~ 71 (397)
.|.+..+..+..-..+.....++|+||||||+||||++|+++|++ +|++|++++|+.... .. .
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~k~VLVTGatGfIG~~lv~~L~~-----~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~ 105 (367)
T PLN02686 31 GWRGSRGGGKEANAGDAGADAEARLVCVTGGVSFLGLAIVDRLLR-----HGYSVRIAVDTQEDKEKLREMEMFGEMGRS 105 (367)
T ss_pred ccccccCccccccccccccCCCCCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhcccccc
Confidence 444555555532233445566788999999999999999999999 899999988864221 00 0
Q ss_pred CCCceEEEccCCCHHHHHHHHccCCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCC--c
Q 015961 72 DHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT--K 147 (397)
Q Consensus 72 ~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~--~ 147 (397)
..++.++.+|++|.+++.+++.++|.|+|+++...... .......++|+.++.+++++|++. .++++++++||. .
T Consensus 106 ~~~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~-~~v~r~V~~SS~~~~ 184 (367)
T PLN02686 106 NDGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT-ESVRKCVFTSSLLAC 184 (367)
T ss_pred CCceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc-CCccEEEEeccHHHh
Confidence 12578899999999999999999999999987643222 122456688999999999999874 247899988874 2
Q ss_pred cccccccccCCCCCCCCCCCCCCC------CCCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcch
Q 015961 148 HYLGPFEAFGKIKPYDPPFTEDMP------RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN 216 (397)
Q Consensus 148 ~y~ss~~~~g~~~~~~~~~~E~~p------~~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~ 216 (397)
+|+.. ++. ....+++|+.+ ..|. ..|+. |+++..+. +..|++++++||++|||++......
T Consensus 185 vyg~~---~~~--~~~~~i~E~~~~~~~~~~~p~--~~Y~~sK~~~E~~~~~~~-~~~gl~~v~lRp~~vyGp~~~~~~~ 256 (367)
T PLN02686 185 VWRQN---YPH--DLPPVIDEESWSDESFCRDNK--LWYALGKLKAEKAAWRAA-RGKGLKLATICPALVTGPGFFRRNS 256 (367)
T ss_pred ccccc---CCC--CCCcccCCCCCCChhhccccc--chHHHHHHHHHHHHHHHH-HhcCceEEEEcCCceECCCCCCCCC
Confidence 34310 110 00122445432 2222 22664 55555554 5679999999999999954221111
Q ss_pred hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCCceeccCCCeeehHHHHHHHHHH
Q 015961 217 LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQ 294 (397)
Q Consensus 217 ~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~--~~~~g~~yni~~~~~~s~~el~~~i~~~ 294 (397)
..+. ...+ +. +.+.|++. ..++| ++++|.+++.++.. ....+++| ++++..+|++|+++.+.+.
T Consensus 257 --~~~~---~~~~--g~-~~~~g~g~--~~~v~---V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~ 322 (367)
T PLN02686 257 --TATI---AYLK--GA-QEMLADGL--LATAD---VERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQ 322 (367)
T ss_pred --hhHH---HHhc--CC-CccCCCCC--cCeEE---HHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHH
Confidence 1111 1112 22 23334433 23444 44557777776653 23456778 7888999999999999999
Q ss_pred hCCCCC
Q 015961 295 FGIEDY 300 (397)
Q Consensus 295 ~g~~~~ 300 (397)
+|.+..
T Consensus 323 ~g~~~~ 328 (367)
T PLN02686 323 IGLPIN 328 (367)
T ss_pred cCCCCC
Confidence 987543
No 44
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.96 E-value=2.1e-28 Score=229.65 Aligned_cols=295 Identities=14% Similarity=0.130 Sum_probs=188.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT 105 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~ 105 (397)
|+|||||||||||++|+++|++ +||+|++++|++... .....+++++.+|++|++++.++++++|.|+|+++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~-----~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~-- 73 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALD-----EGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST-- 73 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC--
Confidence 3799999999999999999998 899999999985432 11235799999999999999999999999999854
Q ss_pred ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961 106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI 185 (397)
Q Consensus 106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~ 185 (397)
....++....++|+.++.|++++|++.+ +++++++|+...+ .|+ . .. |...+.
T Consensus 74 -~~~~~~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~-----~~~--------------~---~~--~~~~K~ 126 (317)
T CHL00194 74 -SRPSDLYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAE-----QYP--------------Y---IP--LMKLKS 126 (317)
T ss_pred -CCCCCccchhhhhHHHHHHHHHHHHHcC--CCEEEEecccccc-----ccC--------------C---Ch--HHHHHH
Confidence 2223445677899999999999999864 7899987742110 111 0 11 333333
Q ss_pred HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961 186 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 265 (397)
Q Consensus 186 l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~ 265 (397)
..+.+.++.+++++++||+.+|+. .. ..+. ..+. .+.++...+ +.+.+.++ +++++|++++.++.
T Consensus 127 ~~e~~l~~~~l~~tilRp~~~~~~----~~---~~~~--~~~~--~~~~~~~~~-~~~~~~~i---~v~Dva~~~~~~l~ 191 (317)
T CHL00194 127 DIEQKLKKSGIPYTIFRLAGFFQG----LI---SQYA--IPIL--EKQPIWITN-ESTPISYI---DTQDAAKFCLKSLS 191 (317)
T ss_pred HHHHHHHHcCCCeEEEeecHHhhh----hh---hhhh--hhhc--cCCceEecC-CCCccCcc---CHHHHHHHHHHHhc
Confidence 222222567899999999988862 11 0010 0011 133433333 33333444 45555888777776
Q ss_pred CCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccccc
Q 015961 266 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDE 345 (397)
Q Consensus 266 ~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
.+...+++||+++++.+|++|+++.+.+.+|.+..... .|..+..+.. .|.. .++..+ ....
T Consensus 192 ~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~----------vp~~~~~~~~----~~~~---~~~~~~-~~~~ 253 (317)
T CHL00194 192 LPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISR----------VPLFLLKLLR----QITG---FFEWTW-NISD 253 (317)
T ss_pred CccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEe----------CCHHHHHHHH----HHHh---hcccch-hhHH
Confidence 66667899999999999999999999999998643211 2222222221 1111 111100 0000
Q ss_pred cccchhhhhhhcCcccccchhhHHH-cCCCC--ccCCHHHHHHHHHHH
Q 015961 346 VGAWWFVDLVLTGEAKLASMNKSKE-HGFSG--FRNSKNSFITWIDKV 390 (397)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p--~~~~~e~~~~~~~~~ 390 (397)
...+........+..++.+++++ +|+.| ..++++.++++++..
T Consensus 254 --~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 299 (317)
T CHL00194 254 --RLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERI 299 (317)
T ss_pred --HHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHH
Confidence 00111111111145567888886 59998 478999999887653
No 45
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.96 E-value=2.9e-28 Score=226.13 Aligned_cols=236 Identities=16% Similarity=0.124 Sum_probs=152.5
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecccC
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN 108 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~ 108 (397)
|||||||||||++|+++|++ +|++|++++|++..... .. .....|+.. ..+...+.++|.|+|+|+.....
T Consensus 1 vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~--~~-~~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTK-----DGHEVTILTRSPPAGAN--TK-WEGYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHH-----cCCEEEEEeCCCCCCCc--cc-ceeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 69999999999999999998 89999999998654311 01 011122222 44556778899999998753321
Q ss_pred --CC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh---
Q 015961 109 --RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT--- 181 (397)
Q Consensus 109 --~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~--- 181 (397)
.. .+...+++|+.++++++++|++.+.+..++++.|++.+| |.. ...+++|+.+..+.+ ++.
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~y-------g~~--~~~~~~E~~~~~~~~--~~~~~~ 140 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYY-------GTS--EDRVFTEEDSPAGDD--FLAELC 140 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEe-------CCC--CCCCcCcccCCCCCC--hHHHHH
Confidence 11 456678999999999999999875333456655544444 421 235677777543322 232
Q ss_pred --HHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961 182 --LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 259 (397)
Q Consensus 182 --~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~ 259 (397)
.|+.+.. . ++.+++++++||+.|||+..+ ....+.... ....+.+ .|++.+.++++++.| +|++
T Consensus 141 ~~~e~~~~~-~-~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~--~~~~~~~---~g~~~~~~~~i~v~D---va~~ 206 (292)
T TIGR01777 141 RDWEEAAQA-A-EDLGTRVVLLRTGIVLGPKGG----ALAKMLPPF--RLGLGGP---LGSGRQWFSWIHIED---LVQL 206 (292)
T ss_pred HHHHHHhhh-c-hhcCCceEEEeeeeEECCCcc----hhHHHHHHH--hcCcccc---cCCCCcccccEeHHH---HHHH
Confidence 2333332 2 456899999999999995322 111111101 1111212 455665666665544 5777
Q ss_pred HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCC
Q 015961 260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED 299 (397)
Q Consensus 260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~ 299 (397)
+..++..+. .+++||+++++.+|++|+++.+.+.+|.+.
T Consensus 207 i~~~l~~~~-~~g~~~~~~~~~~s~~di~~~i~~~~g~~~ 245 (292)
T TIGR01777 207 ILFALENAS-ISGPVNATAPEPVRNKEFAKALARALHRPA 245 (292)
T ss_pred HHHHhcCcc-cCCceEecCCCccCHHHHHHHHHHHhCCCC
Confidence 777776544 356899999999999999999999999754
No 46
>PRK05865 hypothetical protein; Provisional
Probab=99.96 E-value=2.4e-27 Score=241.87 Aligned_cols=258 Identities=19% Similarity=0.266 Sum_probs=178.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 106 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~ 106 (397)
|+|||||||||||++|+++|++ +|++|++++|+..... ..+++++.+|+.|.+++..+++++|.|+|+|+...
T Consensus 1 MkILVTGATGfIGs~La~~Ll~-----~G~~Vv~l~R~~~~~~--~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~ 73 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLS-----QGHEVVGIARHRPDSW--PSSADFIAADIRDATAVESAMTGADVVAHCAWVRG 73 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCchhhc--ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCccc
Confidence 3799999999999999999998 8999999999753322 13688999999999999999999999999975321
Q ss_pred cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH
Q 015961 107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL 186 (397)
Q Consensus 107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l 186 (397)
..+++|+.++.+++++|++.+ +++++++||. . ....|+++
T Consensus 74 -------~~~~vNv~GT~nLLeAa~~~g--vkr~V~iSS~----------------~---------------K~aaE~ll 113 (854)
T PRK05865 74 -------RNDHINIDGTANVLKAMAETG--TGRIVFTSSG----------------H---------------QPRVEQML 113 (854)
T ss_pred -------chHHHHHHHHHHHHHHHHHcC--CCeEEEECCc----------------H---------------HHHHHHHH
Confidence 146899999999999998764 6788877631 0 13334444
Q ss_pred HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 015961 187 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD 266 (397)
Q Consensus 187 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~ 266 (397)
.+++++++++||++||| ++. .++...+ ...++...|+..+.+.++|+.|+ |.+++.++..
T Consensus 114 -----~~~gl~~vILRp~~VYG--P~~-~~~i~~l---------l~~~v~~~G~~~~~~dfIhVdDV---A~Ai~~aL~~ 173 (854)
T PRK05865 114 -----ADCGLEWVAVRCALIFG--RNV-DNWVQRL---------FALPVLPAGYADRVVQVVHSDDA---QRLLVRALLD 173 (854)
T ss_pred -----HHcCCCEEEEEeceEeC--CCh-HHHHHHH---------hcCceeccCCCCceEeeeeHHHH---HHHHHHHHhC
Confidence 34689999999999999 431 1111111 12232334444444456665554 7777766654
Q ss_pred CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCccccccc
Q 015961 267 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEV 346 (397)
Q Consensus 267 ~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
....+++|||++++.+|++|+++.+.+... ++. ......+.. ...+.
T Consensus 174 ~~~~ggvyNIgsg~~~Si~EIae~l~~~~~----~v~------------~~~~~~~~~---------------~~~~~-- 220 (854)
T PRK05865 174 TVIDSGPVNLAAPGELTFRRIAAALGRPMV----PIG------------SPVLRRVTS---------------FAELE-- 220 (854)
T ss_pred CCcCCCeEEEECCCcccHHHHHHHHhhhhc----cCC------------chhhhhccc---------------hhhhh--
Confidence 444578999999999999999998876431 100 000000000 00000
Q ss_pred ccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 347 GAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
.......+|++|+++ +||+|+++++|+|+++++||+.+
T Consensus 221 ---------~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 221 ---------LLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred ---------cccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 000133579999986 69999999999999999999864
No 47
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.95 E-value=7e-26 Score=233.30 Aligned_cols=324 Identities=14% Similarity=0.061 Sum_probs=196.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCH------HHHHHHHc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDP------EETQAKLS 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~------~~l~~~~~ 93 (397)
++|||||||||||++|+++|+++. .|++|++++|++.... ....+++++.+|++|+ +.+..+ .
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~ 76 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRR---REATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G 76 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcC---CCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence 379999999999999999999311 6899999999643210 0114689999999984 345554 8
Q ss_pred cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL 173 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~ 173 (397)
++|.|+|+|+..... .++.+..++|+.++.+++++|++.+ +++++++||..+|+.. ..+.+|+....
T Consensus 77 ~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~--~~~~v~~SS~~v~g~~----------~~~~~e~~~~~ 143 (657)
T PRK07201 77 DIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQ--AATFHHVSSIAVAGDY----------EGVFREDDFDE 143 (657)
T ss_pred CCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcC--CCeEEEEeccccccCc----------cCccccccchh
Confidence 899999998854332 3456678999999999999998863 6788888876655421 12233433211
Q ss_pred -CCCCcchhHHHHHHHHHhc-CCCeeEEEEcCCceeeccCCCc-chhHH--HHHHHHHHhhhcCCCceecCCccccceee
Q 015961 174 -DAPNFYYTLEDILFEEVEK-KEELSWSVHRPDTIFGFSPYSL-MNLVG--ALCVYAAVCKHEGIPLRFPGTKAAWECYS 248 (397)
Q Consensus 174 -~~~~~~y~~e~~l~~~~~~-~~g~~~~ilRp~~v~G~~~~~~-~~~~~--~~~~~~~i~~~~~~~~~~~g~~~~~~~~~ 248 (397)
......|+..|...|...+ ..+++++++||+.|||+..... .+... .+...+.........+...+.+.....
T Consensus 144 ~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 221 (657)
T PRK07201 144 GQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTN-- 221 (657)
T ss_pred hcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeee--
Confidence 1112237766666554323 4689999999999999643211 11100 010111100111111222333333333
Q ss_pred ecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCC---CCCCchhhcCCCCccccCHHHHhccc
Q 015961 249 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED---YGLSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 249 ~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
..++++++.+++.++..+...+++||+++++.+|++|+++.+.+.+|.+. +... .|..+...+...
T Consensus 222 -~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----------~p~~~~~~~~~~ 290 (657)
T PRK07201 222 -IVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGF----------LPGFVAAPLLAA 290 (657)
T ss_pred -eeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCcccccccc----------CChHHHHHHhhh
Confidence 44555668887777766566789999999999999999999999999875 2211 122222222110
Q ss_pred ---hHHHHH-HHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-c---CCCCccCCHHHHHHHHHHHhc
Q 015961 326 ---EGVWEE-IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-H---GFSGFRNSKNSFITWIDKVKG 392 (397)
Q Consensus 326 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-l---G~~p~~~~~e~~~~~~~~~~~ 392 (397)
...+.. +.+..++.+..+.. ......+|.+|+++ | |+. ..++++.+...++++.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~f~~~~~~~~L~~~~~~-~p~~~~~~~~~~~~~~~ 353 (657)
T PRK07201 291 LGPVRRLRNAVATQLGIPPEVLDF-----------VNYPTTFDSRETRAALKGSGIE-VPRLASYAPRLWDYWER 353 (657)
T ss_pred cchhhHHHHHHHHhcCCCHHHHHh-----------ccCCCeeccHHHHHHhccCCcC-CCChHHHHHHHHHHHHh
Confidence 011111 12233333322211 11145689999975 5 554 55678888888876644
No 48
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.95 E-value=4.4e-27 Score=216.64 Aligned_cols=276 Identities=17% Similarity=0.160 Sum_probs=173.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEEe
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV 104 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~~ 104 (397)
||||||||+|+||++|+++|.+ +|++|+++.|. ..|++|.+.+.+.+.. .|.|+|+|+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~-----~~~~v~~~~r~--------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKE-----RGYEVIATSRS--------------DLDLTDPEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----TSEEEEEESTT--------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhh-----CCCEEEEeCch--------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence 4899999999999999999998 89999999775 6899999999888876 4569999876
Q ss_pred cccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961 105 TWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 182 (397)
Q Consensus 105 ~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~ 182 (397)
+.... .+++..+++|+.++.+|+++|...+ .+++++||..+|.+. ...|++|++++.|. ..|+.
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~---~~li~~STd~VFdG~---------~~~~y~E~d~~~P~--~~YG~ 127 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKERG---ARLIHISTDYVFDGD---------KGGPYTEDDPPNPL--NVYGR 127 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEGGGS-SS---------TSSSB-TTS----S--SHHHH
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC---CcEEEeeccEEEcCC---------cccccccCCCCCCC--CHHHH
Confidence 54332 2788899999999999999999865 467777877777543 25678999887665 34887
Q ss_pred HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961 183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW 262 (397)
Q Consensus 183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~ 262 (397)
.|...|...++..-+..|+|++++||.. ..++...+...+ ..+.++....+ + +.....+.++|+.++.
T Consensus 128 ~K~~~E~~v~~~~~~~~IlR~~~~~g~~---~~~~~~~~~~~~----~~~~~i~~~~d--~---~~~p~~~~dlA~~i~~ 195 (286)
T PF04321_consen 128 SKLEGEQAVRAACPNALILRTSWVYGPS---GRNFLRWLLRRL----RQGEPIKLFDD--Q---YRSPTYVDDLARVILE 195 (286)
T ss_dssp HHHHHHHHHHHH-SSEEEEEE-SEESSS---SSSHHHHHHHHH----HCTSEEEEESS--C---EE--EEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEecceecccC---CCchhhhHHHHH----hcCCeeEeeCC--c---eeCCEEHHHHHHHHHH
Confidence 7766665433333489999999999952 234443332111 12444444432 2 3344455556777776
Q ss_pred HhcCCC---CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCC
Q 015961 263 AAVDPY---AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ 339 (397)
Q Consensus 263 ~~~~~~---~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (397)
++.... ...++||+++++.+|+.|++..+++.+|.....+.+ .+..+ .+.
T Consensus 196 l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~-----------~~~~~---------------~~~- 248 (286)
T PF04321_consen 196 LIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKP-----------VSSSE---------------FPR- 248 (286)
T ss_dssp HHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEE-----------ESSTT---------------STT-
T ss_pred HHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEe-----------ccccc---------------CCC-
Confidence 665422 236899999999999999999999999987633211 11000 000
Q ss_pred cccccccccchhhhhhhcCc-ccccchhhHHHc-CCCCccCCHHHHHHHHHHH
Q 015961 340 PTRLDEVGAWWFVDLVLTGE-AKLASMNKSKEH-GFSGFRNSKNSFITWIDKV 390 (397)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~l-G~~p~~~~~e~~~~~~~~~ 390 (397)
. ...+ +..+|++|++.+ |++ ..+.+++|+++++.|
T Consensus 249 --~-------------~~rp~~~~L~~~kl~~~~g~~-~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 249 --A-------------APRPRNTSLDCRKLKNLLGIK-PPPWREGLEELVKQY 285 (286)
T ss_dssp --S-------------SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred --C-------------CCCCCcccccHHHHHHccCCC-CcCHHHHHHHHHHHh
Confidence 0 0111 567899999986 998 588999999998865
No 49
>PLN02583 cinnamoyl-CoA reductase
Probab=99.94 E-value=2.1e-25 Score=207.24 Aligned_cols=241 Identities=13% Similarity=0.093 Sum_probs=160.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHccCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
+++|||||||||||++++++|++ +||+|++++|+.... .. ...+++++.+|++|.+++.+++.+++
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~-----~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d 80 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLS-----RGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCS 80 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCC
Confidence 46899999999999999999999 899999999853211 10 12368899999999999999999999
Q ss_pred CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCC-CCCCCCCCCCCCCCCCC
Q 015961 97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK-IKPYDPPFTEDMPRLDA 175 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~-~~~~~~~~~E~~p~~~~ 175 (397)
.|+|+++.........++.+++|+.|+.+++++|.+.. .+++++++||...+. ++. ......+++|+.+..+.
T Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~-----~~~~~~~~~~~~~E~~~~~~~ 154 (297)
T PLN02583 81 GLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVI-----WRDDNISTQKDVDERSWSDQN 154 (297)
T ss_pred EEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHhee-----cccccCCCCCCCCcccCCCHH
Confidence 99997643221112356789999999999999998752 367899888754431 221 11113456776543211
Q ss_pred ----CCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 015961 176 ----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC 246 (397)
Q Consensus 176 ----~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~ 246 (397)
....|+. |+++.++. +..+++++++||++|||+.... .+ .+ . .+....+++. ...
T Consensus 155 ~~~~~~~~Y~~sK~~aE~~~~~~~-~~~gi~~v~lrp~~v~Gp~~~~-~~---~~------~--~~~~~~~~~~---~~~ 218 (297)
T PLN02583 155 FCRKFKLWHALAKTLSEKTAWALA-MDRGVNMVSINAGLLMGPSLTQ-HN---PY------L--KGAAQMYENG---VLV 218 (297)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHH-HHhCCcEEEEcCCcccCCCCCC-ch---hh------h--cCCcccCccc---Ccc
Confidence 0113664 45554443 4568999999999999943211 11 11 0 1111111221 123
Q ss_pred eeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCC
Q 015961 247 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI 297 (397)
Q Consensus 247 ~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~ 297 (397)
++ |++++|++++.++..+...+ .|+++++....+.++.+++.+.+..
T Consensus 219 ~v---~V~Dva~a~~~al~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 219 TV---DVNFLVDAHIRAFEDVSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred eE---EHHHHHHHHHHHhcCcccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence 44 45556888888887655544 6999886666778899999888763
No 50
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.94 E-value=1.7e-25 Score=210.37 Aligned_cols=266 Identities=16% Similarity=0.151 Sum_probs=178.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTD 97 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 97 (397)
++|+||||||+||||++|+++|++ +| ++|++++|+.... .....+++++.+|++|.+.+.+++.++|.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~-----~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLE-----NYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-----hCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 457999999999999999999998 54 7899999875321 11124688999999999999999999999
Q ss_pred eeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCC
Q 015961 98 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 175 (397)
Q Consensus 98 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~ 175 (397)
|+|+|+..... ..++.+.+++|+.|+.+++++|++.+ +.+|+++||.. + ..|.
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~--~~~iV~~SS~~-----------------~------~~p~ 132 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG--VKRVVALSTDK-----------------A------ANPI 132 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeCCC-----------------C------CCCC
Confidence 99998864332 22567889999999999999999754 66888776411 0 0121
Q ss_pred CCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC-CceecCCcccccee
Q 015961 176 PNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECY 247 (397)
Q Consensus 176 ~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~ 247 (397)
.. |+. |+++..+. ....|++++++||++|||+ +. +....+ ..... .+. ++++. ++.+.+.+
T Consensus 133 ~~--Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~--~~--~~i~~~---~~~~~-~~~~~~~i~-~~~~~r~~ 201 (324)
T TIGR03589 133 NL--YGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS--RG--SVVPFF---KSLKE-EGVTELPIT-DPRMTRFW 201 (324)
T ss_pred CH--HHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC--CC--CcHHHH---HHHHH-hCCCCeeeC-CCCceEee
Confidence 22 554 44443321 1457899999999999994 32 121111 11111 233 33332 44555667
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchH
Q 015961 248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 327 (397)
Q Consensus 248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (397)
+++.|+ +++++.++.. ...+++|+ +++..+++.|+++.+.+..+......
T Consensus 202 i~v~D~---a~a~~~al~~-~~~~~~~~-~~~~~~sv~el~~~i~~~~~~~~~~~------------------------- 251 (324)
T TIGR03589 202 ITLEQG---VNFVLKSLER-MLGGEIFV-PKIPSMKITDLAEAMAPECPHKIVGI------------------------- 251 (324)
T ss_pred EEHHHH---HHHHHHHHhh-CCCCCEEc-cCCCcEEHHHHHHHHHhhCCeeEeCC-------------------------
Confidence 766665 7777766654 33567784 66678999999999988654321110
Q ss_pred HHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHH
Q 015961 328 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITW 386 (397)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~ 386 (397)
++.... .....|++|+++ +||.|+++++++++++
T Consensus 252 -----------~~g~~~--------------~~~~~~~~~~~~~lg~~~~~~l~~~~~~~ 286 (324)
T TIGR03589 252 -----------RPGEKL--------------HEVMITEDDARHTYELGDYYAILPSISFW 286 (324)
T ss_pred -----------CCCchh--------------HhhhcChhhhhhhcCCCCeEEEccccccc
Confidence 000000 023469999986 6999999999998744
No 51
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.94 E-value=6.7e-27 Score=210.09 Aligned_cols=223 Identities=24% Similarity=0.311 Sum_probs=165.4
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEe
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYV 104 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~ 104 (397)
|||||||||||++|+++|++ +|++|+.+.|++..... ...+++++.+|+.|.+.+.++++.. |.|+|+|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLK-----KGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHH-----TTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHH-----cCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 79999999999999999999 89999999998755311 0127899999999999999999887 889999764
Q ss_pred ccc--CCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhH
Q 015961 105 TWT--NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 182 (397)
Q Consensus 105 ~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~ 182 (397)
... ...++.+.++.|+.++.+++++|++.+ +++++++||..+| |.. ...+++|+.+..|... |+.
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~sS~~~y-------~~~--~~~~~~e~~~~~~~~~--Y~~ 142 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAG--VKRFIFLSSASVY-------GDP--DGEPIDEDSPINPLSP--YGA 142 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--TSEEEEEEEGGGG-------TSS--SSSSBETTSGCCHSSH--HHH
T ss_pred cccccccccccccccccccccccccccccccc--ccccccccccccc-------ccc--cccccccccccccccc--ccc
Confidence 321 113567888999999999999999875 4888888865555 432 2567788887755444 553
Q ss_pred -----HHHHHHHHhcCCCeeEEEEcCCceeecc-CCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961 183 -----EDILFEEVEKKEELSWSVHRPDTIFGFS-PYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL 255 (397)
Q Consensus 183 -----e~~l~~~~~~~~g~~~~ilRp~~v~G~~-~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~ 255 (397)
|+++..+. +..+++++++||+.|||+. +.. ...+...+.. ....+.++.+++++.+.++++|+.|+
T Consensus 143 ~K~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~v~D~-- 215 (236)
T PF01370_consen 143 SKRAAEELLRDYA-KKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIR----QALKGKPIKIPGDGSQVRDFIHVDDL-- 215 (236)
T ss_dssp HHHHHHHHHHHHH-HHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHH----HHHTTSSEEEESTSSCEEEEEEHHHH--
T ss_pred ccccccccccccc-cccccccccccccccccccccccccccccchhhH----HhhcCCcccccCCCCCccceEEHHHH--
Confidence 66666654 5568999999999999965 111 2222222211 11236677888888887777777665
Q ss_pred HHHHHHHHhcCCCCCCCceecc
Q 015961 256 IAEHQIWAAVDPYAKNEAFNCN 277 (397)
Q Consensus 256 la~~~~~~~~~~~~~g~~yni~ 277 (397)
|+++++++.++...+++|||+
T Consensus 216 -a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 216 -AEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp -HHHHHHHHHHSCTTTEEEEES
T ss_pred -HHHHHHHHhCCCCCCCEEEeC
Confidence 888888888777789999986
No 52
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.94 E-value=1.2e-25 Score=195.40 Aligned_cols=236 Identities=15% Similarity=0.135 Sum_probs=167.7
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCC-CCCceEEEccCCCHHHHHHHHc-cCCCeeEEEEecc
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-DHLVEYVQCDVSDPEETQAKLS-QLTDVTHIFYVTW 106 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~-~~~~V~h~a~~~~ 106 (397)
|+|||||||||++|+.+|.+ .||+|++++|++...... ...+. ..+.+..... ++|.|+|+|+-.-
T Consensus 1 IliTGgTGlIG~~L~~~L~~-----~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I 68 (297)
T COG1090 1 ILITGGTGLIGRALTARLRK-----GGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPI 68 (297)
T ss_pred CeEeccccchhHHHHHHHHh-----CCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCcc
Confidence 68999999999999999999 899999999998654211 11111 1122333344 6999999988543
Q ss_pred cCC--C--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC--Ccch
Q 015961 107 TNR--S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP--NFYY 180 (397)
Q Consensus 107 ~~~--~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~--~~~y 180 (397)
... . ..+..++..+..|+.|.++..+...+++.++..|.+.+|+.+ .+..++|+.|....- ...+
T Consensus 69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~---------~~~~~tE~~~~g~~Fla~lc~ 139 (297)
T COG1090 69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS---------GDRVVTEESPPGDDFLAQLCQ 139 (297)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC---------CceeeecCCCCCCChHHHHHH
Confidence 222 1 456678999999999999998776678888877777766543 266788886543210 1112
Q ss_pred hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 015961 181 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ 260 (397)
Q Consensus 181 ~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~ 260 (397)
.-|+....+ +..|.+++++|.+.|.|+..|....+...+ ..++|.+ .|+++||.+++|+.|. ++++
T Consensus 140 ~WE~~a~~a--~~~gtRvvllRtGvVLs~~GGaL~~m~~~f------k~glGG~---~GsGrQ~~SWIhieD~---v~~I 205 (297)
T COG1090 140 DWEEEALQA--QQLGTRVVLLRTGVVLSPDGGALGKMLPLF------KLGLGGK---LGSGRQWFSWIHIEDL---VNAI 205 (297)
T ss_pred HHHHHHhhh--hhcCceEEEEEEEEEecCCCcchhhhcchh------hhccCCc---cCCCCceeeeeeHHHH---HHHH
Confidence 225544443 466899999999999995444332322222 2234545 7899999988888776 7788
Q ss_pred HHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961 261 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300 (397)
Q Consensus 261 ~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~ 300 (397)
.++..++...| .||++++.+++.+++...+++.++++..
T Consensus 206 ~fll~~~~lsG-p~N~taP~PV~~~~F~~al~r~l~RP~~ 244 (297)
T COG1090 206 LFLLENEQLSG-PFNLTAPNPVRNKEFAHALGRALHRPAI 244 (297)
T ss_pred HHHHhCcCCCC-cccccCCCcCcHHHHHHHHHHHhCCCcc
Confidence 88887766655 6999999999999999999999997644
No 53
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=1.7e-24 Score=192.89 Aligned_cols=273 Identities=17% Similarity=0.208 Sum_probs=197.2
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccC--CCeeEEEEec
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT 105 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--~~V~h~a~~~ 105 (397)
+|||||++|++|+.|++.|.. +++|++++|.. +|++|++.+.+.+... |.|+|+|+.+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~~------~~~v~a~~~~~--------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt 61 (281)
T COG1091 2 KILITGANGQLGTELRRALPG------EFEVIATDRAE--------------LDITDPDAVLEVIRETRPDVVINAAAYT 61 (281)
T ss_pred cEEEEcCCChHHHHHHHHhCC------CceEEeccCcc--------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence 499999999999999999972 67999999862 8999999999999876 5699998866
Q ss_pred ccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHH
Q 015961 106 WTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE 183 (397)
Q Consensus 106 ~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e 183 (397)
.+.. .+++..+.+|..|+.|+.++|++.+.. ++++||..+|-+. ...|+.|++++.|.. +|+++
T Consensus 62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~---lVhiSTDyVFDG~---------~~~~Y~E~D~~~P~n--vYG~s 127 (281)
T COG1091 62 AVDKAESEPELAFAVNATGAENLARAAAEVGAR---LVHISTDYVFDGE---------KGGPYKETDTPNPLN--VYGRS 127 (281)
T ss_pred ccccccCCHHHHHHhHHHHHHHHHHHHHHhCCe---EEEeecceEecCC---------CCCCCCCCCCCCChh--hhhHH
Confidence 5543 267889999999999999999998744 4555666666442 246889999877754 49999
Q ss_pred HHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 015961 184 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA 263 (397)
Q Consensus 184 ~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~ 263 (397)
|++.|...++.+-+.+|+|.+++||..+ .||...+... .+ .+.++....+ .+.....+.++|.++..+
T Consensus 128 Kl~GE~~v~~~~~~~~I~Rtswv~g~~g---~nFv~tml~l---a~-~~~~l~vv~D-----q~gsPt~~~dlA~~i~~l 195 (281)
T COG1091 128 KLAGEEAVRAAGPRHLILRTSWVYGEYG---NNFVKTMLRL---AK-EGKELKVVDD-----QYGSPTYTEDLADAILEL 195 (281)
T ss_pred HHHHHHHHHHhCCCEEEEEeeeeecCCC---CCHHHHHHHH---hh-cCCceEEECC-----eeeCCccHHHHHHHHHHH
Confidence 9998877677778999999999999543 4555444221 11 2444443322 455667778888888776
Q ss_pred hcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccchHHHHHHHHHhCCCcccc
Q 015961 264 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL 343 (397)
Q Consensus 264 ~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
+.. ...+.+||+++...+||-|+++.|.+.+|.+..... +.+.. +++. +.
T Consensus 196 l~~-~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~-----------~~~~~---------------~~~~---~a 245 (281)
T COG1091 196 LEK-EKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIE-----------PIASA---------------EYPT---PA 245 (281)
T ss_pred Hhc-cccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccc-----------ccccc---------------ccCc---cC
Confidence 654 334459999998889999999999999997653211 11110 1111 11
Q ss_pred cccccchhhhhhhcCcccccchhhHHHc-CCCCccCCHHHHHHHHHH
Q 015961 344 DEVGAWWFVDLVLTGEAKLASMNKSKEH-GFSGFRNSKNSFITWIDK 389 (397)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~d~~k~~~l-G~~p~~~~~e~~~~~~~~ 389 (397)
.+ + .+..+|+.|+++. |++ ..+.+++++++++.
T Consensus 246 ~R---P---------~~S~L~~~k~~~~~g~~-~~~w~~~l~~~~~~ 279 (281)
T COG1091 246 KR---P---------ANSSLDTKKLEKAFGLS-LPEWREALKALLDE 279 (281)
T ss_pred CC---C---------cccccchHHHHHHhCCC-CccHHHHHHHHHhh
Confidence 11 0 0345799999876 776 67788888877764
No 54
>PLN02996 fatty acyl-CoA reductase
Probab=99.94 E-value=3.9e-25 Score=217.64 Aligned_cols=264 Identities=16% Similarity=0.061 Sum_probs=169.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCC-CCCCCCcEEEEEeCCCCCC---------C-----C--------------CCCCc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------W-----N--------------ADHLV 75 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~-~~~~~g~~V~~l~R~~~~~---------~-----~--------------~~~~v 75 (397)
.+|+|||||||||||++|+++|++. +.+. +|+++.|..... . + ...++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~---~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVK---KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCC---EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 4589999999999999999998863 3222 799999965321 0 0 01578
Q ss_pred eEEEccCC-------CHHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcc
Q 015961 76 EYVQCDVS-------DPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 148 (397)
Q Consensus 76 ~~~~~Dl~-------d~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~ 148 (397)
+++.||++ +.+.+..+++++|.|+|+|+.... ..++....++|+.||.+++++|++. .++++++++||..+
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~~v 164 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTAYV 164 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeeEE
Confidence 89999998 444567778889999999986543 2467888999999999999999874 24788999998888
Q ss_pred ccccccccCCC-CCCCC--------CCC-------------------CC-----------CC--CCCCCCcchhHHHHHH
Q 015961 149 YLGPFEAFGKI-KPYDP--------PFT-------------------ED-----------MP--RLDAPNFYYTLEDILF 187 (397)
Q Consensus 149 y~ss~~~~g~~-~~~~~--------~~~-------------------E~-----------~p--~~~~~~~~y~~e~~l~ 187 (397)
|+......... .+... .+. ++ .+ ....++ .|+.+|.++
T Consensus 165 yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn-~Y~~TK~~a 243 (491)
T PLN02996 165 CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN-TYVFTKAMG 243 (491)
T ss_pred ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC-chHhhHHHH
Confidence 86421110000 00000 000 00 00 001122 377655555
Q ss_pred HHHhc--CCCeeEEEEcCCceeeccCCC----cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 015961 188 EEVEK--KEELSWSVHRPDTIFGFSPYS----LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI 261 (397)
Q Consensus 188 ~~~~~--~~g~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~ 261 (397)
|.... ..+++++|+||++|||+.... ..++...-... +.-..|....++|++.+.++++++.|+ +.+++
T Consensus 244 E~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~--~~~~~g~~~~~~gdg~~~~D~v~Vddv---v~a~l 318 (491)
T PLN02996 244 EMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVI--VGYGKGKLTCFLADPNSVLDVIPADMV---VNAMI 318 (491)
T ss_pred HHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHH--HHhccceEeEEecCCCeecceecccHH---HHHHH
Confidence 54422 247999999999999964221 11111100011 111234444677888766666665555 77777
Q ss_pred HHhcCC--C-CCCCceeccCC--CeeehHHHHHHHHHHhCCCC
Q 015961 262 WAAVDP--Y-AKNEAFNCNNG--DVFKWKHLWKVLAEQFGIED 299 (397)
Q Consensus 262 ~~~~~~--~-~~g~~yni~~~--~~~s~~el~~~i~~~~g~~~ 299 (397)
.++... . ..+++||++++ .++|+.|+++.+.+.++..+
T Consensus 319 ~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 319 VAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred HHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 666542 1 24679999998 88999999999999887643
No 55
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=3.4e-24 Score=179.60 Aligned_cols=286 Identities=17% Similarity=0.195 Sum_probs=198.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC--eeEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD--VTHIF 102 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~--V~h~a 102 (397)
++|||||++|.+|+++++.+.+ +|. +=..+.- --.+||++.++.++.++...+ |+|+|
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~-----q~~~~e~wvf~~-------------skd~DLt~~a~t~~lF~~ekPthVIhlA 63 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQE-----QGFDDENWVFIG-------------SKDADLTNLADTRALFESEKPTHVIHLA 63 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHh-----cCCCCcceEEec-------------cccccccchHHHHHHHhccCCceeeehH
Confidence 6899999999999999999987 444 2111111 115899999999999988776 99998
Q ss_pred EecccC---CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC----CCCCC
Q 015961 103 YVTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLDA 175 (397)
Q Consensus 103 ~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~----p~~~~ 175 (397)
+..+.- ...+.+++..|+.--.|++..|-+.+ ++++++.-|++.|. . ....|+.|+. |+.|
T Consensus 64 AmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g--v~K~vsclStCIfP-------d--kt~yPIdEtmvh~gpphp- 131 (315)
T KOG1431|consen 64 AMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG--VKKVVSCLSTCIFP-------D--KTSYPIDETMVHNGPPHP- 131 (315)
T ss_pred hhhcchhhcCCCchHHHhhcceechhHHHHHHHhc--hhhhhhhcceeecC-------C--CCCCCCCHHHhccCCCCC-
Confidence 865432 23678889999999999999998875 66666555555442 2 1256788875 3333
Q ss_pred CCcchhHHHHH----HHHHhcCCCeeEEEEcCCceeeccCC-Ccc-hh-HHHHHHHHHHhhhcCC-CceecCCcccccee
Q 015961 176 PNFYYTLEDIL----FEEVEKKEELSWSVHRPDTIFGFSPY-SLM-NL-VGALCVYAAVCKHEGI-PLRFPGTKAAWECY 247 (397)
Q Consensus 176 ~~~~y~~e~~l----~~~~~~~~g~~~~ilRp~~v~G~~~~-~~~-~~-~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~ 247 (397)
+++.|+..|.+ ..++..++|..++.+-|+++|||..+ ++. .. ...+...+...+..+. ++...|++...+.+
T Consensus 132 sN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqF 211 (315)
T KOG1431|consen 132 SNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQF 211 (315)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHH
Confidence 36667754422 22334678999999999999995433 222 22 2223222223333344 57778888888888
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCCceeccCCC--eeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHHHhccc
Q 015961 248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD--VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 325 (397)
Q Consensus 248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
++..| ||+.+++.+.+ -..-+-.+++.++ .+|++|+++.+.+.+|......
T Consensus 212 iys~D---LA~l~i~vlr~-Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~----------------------- 264 (315)
T KOG1431|consen 212 IYSDD---LADLFIWVLRE-YEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV----------------------- 264 (315)
T ss_pred hhHhH---HHHHHHHHHHh-hcCccceEeccCccceeEHHHHHHHHHHHhCCCceEE-----------------------
Confidence 87666 48888888754 3334567888877 6999999999999999875431
Q ss_pred hHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHHcCCCCccC-CHHHHHHHHHHHhcC
Q 015961 326 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRN-SKNSFITWIDKVKGF 393 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~e~~~~~~~~~~~~ 393 (397)
|+ .++- + .. .+..+|++|++.+||.|+.+ +++++.++++||.++
T Consensus 265 ---~D---------ttK~-D-Gq----------~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 265 ---WD---------TTKS-D-GQ----------FKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLDN 309 (315)
T ss_pred ---ee---------ccCC-C-CC----------cccccchHHHHHhCCCcccChHHHHHHHHHHHHHHh
Confidence 11 1110 0 00 14468999999999999998 999999999999753
No 56
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.92 E-value=1.2e-22 Score=194.53 Aligned_cols=323 Identities=18% Similarity=0.138 Sum_probs=191.3
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC--------------CC--C-C-CCceEEEccCCCH--
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--------------WN--A-D-HLVEYVQCDVSDP-- 85 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~--------------~~--~-~-~~v~~~~~Dl~d~-- 85 (397)
+|||||||||||++|+++|++ +| ++|+|++|+.... .. . . .+++++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~-----~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLR-----RSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHh-----CCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 589999999999999999998 66 6799999975421 00 0 0 4789999999754
Q ss_pred ----HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC
Q 015961 86 ----EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 86 ----~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
+.+.....++|.|+|+|+.... ..+.....++|+.++.+++++|.+.+ +++++++||..+|+...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~~-------- 144 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAID-------- 144 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCcC--------
Confidence 4566677889999999875432 23456677899999999999998753 56788888766664310
Q ss_pred CCCCCCCCCCCCC---CCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961 162 YDPPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI 233 (397)
Q Consensus 162 ~~~~~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~ 233 (397)
..+..|+.+..+ .....|+. |+++.++. ..|++++++||+.|+|+......+....+...+......+.
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (367)
T TIGR01746 145 -LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS--DRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA 221 (367)
T ss_pred -CCCccccccccccccccCCChHHHHHHHHHHHHHHH--hcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC
Confidence 111233332211 11223665 44444432 34899999999999995322211111111111111111221
Q ss_pred CceecCCccccceeeecccHHHHHHHHHHHhcCCCC--CCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 015961 234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYA--KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG 311 (397)
Q Consensus 234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~--~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~ 311 (397)
++..... ..+..+++++|.+++.++..+.. .+++||++++..++++|+++.+.+ +|.+..
T Consensus 222 ---~p~~~~~---~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~----------- 283 (367)
T TIGR01746 222 ---YPDSPEL---TEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK----------- 283 (367)
T ss_pred ---CCCCCcc---ccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC-----------
Confidence 1222111 22344556668888777665443 278999999999999999999998 887543
Q ss_pred CccccCHHHHhccchHHHHHHHHHh-CCCcccccccccchhhh--hhhc-CcccccchhhHHH----cCCCCccCCHHHH
Q 015961 312 GTQRVKLAEFMKGKEGVWEEIVREN-QLQPTRLDEVGAWWFVD--LVLT-GEAKLASMNKSKE----HGFSGFRNSKNSF 383 (397)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~-~~~~~~d~~k~~~----lG~~p~~~~~e~~ 383 (397)
.+++.+|+...... ..+. +....++. .-|.+.. .... .....+++++.++ +|..+..-..+.+
T Consensus 284 ---~~~~~~w~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (367)
T TIGR01746 284 ---LVSFDEWLQRLEDS----DTAKRDPPRYPLL--PLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLL 354 (367)
T ss_pred ---cCCHHHHHHHHHHh----hhcCCCcccccch--hhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHH
Confidence 24556666532110 0000 00000110 0111110 0000 0022456655532 4766555577889
Q ss_pred HHHHHHHhcCCCC
Q 015961 384 ITWIDKVKGFKIV 396 (397)
Q Consensus 384 ~~~~~~~~~~~~~ 396 (397)
+.++++++..|++
T Consensus 355 ~~~~~~~~~~~~~ 367 (367)
T TIGR01746 355 HLYLQYLKEIGFL 367 (367)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999988764
No 57
>PLN02778 3,5-epimerase/4-reductase
Probab=99.92 E-value=9.1e-23 Score=189.30 Aligned_cols=224 Identities=14% Similarity=0.045 Sum_probs=143.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeEEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIF 102 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a 102 (397)
+.|+||||||+||||++|+++|++ +|++|+... +|+.|.+.+...+. ++|.|+|+|
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~-----~g~~V~~~~-----------------~~~~~~~~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQE-----QGIDFHYGS-----------------GRLENRASLEADIDAVKPTHVFNAA 65 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHh-----CCCEEEEec-----------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence 447899999999999999999998 899987432 33455555666665 578899999
Q ss_pred EecccC-----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC--CCCCCCCCCCCCCC
Q 015961 103 YVTWTN-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP--YDPPFTEDMPRLDA 175 (397)
Q Consensus 103 ~~~~~~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~--~~~~~~E~~p~~~~ 175 (397)
+.+... ..++.+.+++|+.|+.+|+++|++.+ +++++ .||..+|+. +...+ ...+++|++++.+.
T Consensus 66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g--v~~v~-~sS~~vy~~-----~~~~p~~~~~~~~Ee~~p~~~ 137 (298)
T PLN02778 66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG--LVLTN-YATGCIFEY-----DDAHPLGSGIGFKEEDTPNFT 137 (298)
T ss_pred cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCEEE-EecceEeCC-----CCCCCcccCCCCCcCCCCCCC
Confidence 865432 13678889999999999999999865 44444 444444421 11000 12346776654332
Q ss_pred CCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961 176 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL 255 (397)
Q Consensus 176 ~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~ 255 (397)
...|+..|.+.|.+...+ -+..++|+..++|.......++... +.+ +.++...+. ++.++.|+
T Consensus 138 -~s~Yg~sK~~~E~~~~~y-~~~~~lr~~~~~~~~~~~~~~fi~~------~~~--~~~~~~~~~-----s~~yv~D~-- 200 (298)
T PLN02778 138 -GSFYSKTKAMVEELLKNY-ENVCTLRVRMPISSDLSNPRNFITK------ITR--YEKVVNIPN-----SMTILDEL-- 200 (298)
T ss_pred -CCchHHHHHHHHHHHHHh-hccEEeeecccCCcccccHHHHHHH------HHc--CCCeeEcCC-----CCEEHHHH--
Confidence 234887777766543332 2567889888888432221222211 111 333222221 34555444
Q ss_pred HHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCC
Q 015961 256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE 298 (397)
Q Consensus 256 la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~ 298 (397)
+.+++.++.. +. +++||++++..+|+.|+++.+++.+|..
T Consensus 201 -v~al~~~l~~-~~-~g~yNigs~~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 201 -LPISIEMAKR-NL-TGIYNFTNPGVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred -HHHHHHHHhC-CC-CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 6666655543 22 4699999999999999999999999964
No 58
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.91 E-value=3.1e-23 Score=199.21 Aligned_cols=227 Identities=19% Similarity=0.148 Sum_probs=158.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceEEEccCCCHHHHHHHHc-
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLS- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~- 93 (397)
..+++|||||||||||++++++|++ +|++|++++|+..... ...++++++.+|++|++++..+++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~ 132 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVR-----RGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFS 132 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHH
Confidence 3457999999999999999999998 8999999999753210 012478999999999999999888
Q ss_pred ---cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 170 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~ 170 (397)
++|.|+|+++. ......+.+++|+.++.+++++|++.+ +++|+++|+..+| +
T Consensus 133 ~~~~~D~Vi~~aa~---~~~~~~~~~~vn~~~~~~ll~aa~~~g--v~r~V~iSS~~v~-------~------------- 187 (390)
T PLN02657 133 EGDPVDVVVSCLAS---RTGGVKDSWKIDYQATKNSLDAGREVG--AKHFVLLSAICVQ-------K------------- 187 (390)
T ss_pred hCCCCcEEEECCcc---CCCCCccchhhHHHHHHHHHHHHHHcC--CCEEEEEeecccc-------C-------------
Confidence 47889987652 112223457889999999999998764 7788888754322 1
Q ss_pred CCCCCCCcchhH---HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 015961 171 PRLDAPNFYYTL---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY 247 (397)
Q Consensus 171 p~~~~~~~~y~~---e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~ 247 (397)
|...+..+. |+.+.. ...+++++|+||+.+||.- ..+ + ...+ .+.++.+.|++...+
T Consensus 188 ---p~~~~~~sK~~~E~~l~~---~~~gl~~tIlRp~~~~~~~----~~~---~----~~~~-~g~~~~~~GdG~~~~-- 247 (390)
T PLN02657 188 ---PLLEFQRAKLKFEAELQA---LDSDFTYSIVRPTAFFKSL----GGQ---V----EIVK-DGGPYVMFGDGKLCA-- 247 (390)
T ss_pred ---cchHHHHHHHHHHHHHHh---ccCCCCEEEEccHHHhccc----HHH---H----Hhhc-cCCceEEecCCcccc--
Confidence 111111222 333322 2478999999999999821 111 1 1111 256655667665322
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCCceeccCC-CeeehHHHHHHHHHHhCCCCC
Q 015961 248 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDY 300 (397)
Q Consensus 248 ~~~~da~~la~~~~~~~~~~~~~g~~yni~~~-~~~s~~el~~~i~~~~g~~~~ 300 (397)
....++.++|..++.++.++...+++|||+++ +.+|++|+++.+.+.+|.+..
T Consensus 248 ~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 248 CKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred cCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 12234455577777777666667899999986 589999999999999998643
No 59
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.90 E-value=4.1e-22 Score=197.68 Aligned_cols=259 Identities=12% Similarity=0.063 Sum_probs=166.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCC-CCCCCCcEEEEEeCCCCCC---------CC-------------------CCCCce
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------WN-------------------ADHLVE 76 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~-~~~~~g~~V~~l~R~~~~~---------~~-------------------~~~~v~ 76 (397)
+++|||||||||||++|+++|++. +.+ .+|++++|..... +. ...++.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v---~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDV---GKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCC---cEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 589999999999999999999962 222 2799999964321 00 024688
Q ss_pred EEEccCCCH------HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCcccc
Q 015961 77 YVQCDVSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYL 150 (397)
Q Consensus 77 ~~~~Dl~d~------~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ 150 (397)
++.+|++++ +..+.+.+.+|.|+|+|+.... ..+++..+++|+.|+.+++++|++. .++++++++||+.+|+
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f-~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTayVyG 273 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF-DERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTAYVNG 273 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc-ccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCceeec
Confidence 999999987 3455666778999999986543 2467888999999999999999875 3477899999988886
Q ss_pred ccccccCC-CCCCCC-----------------CCC------------CC--C---------C-------CCCCCCcchhH
Q 015961 151 GPFEAFGK-IKPYDP-----------------PFT------------ED--M---------P-------RLDAPNFYYTL 182 (397)
Q Consensus 151 ss~~~~g~-~~~~~~-----------------~~~------------E~--~---------p-------~~~~~~~~y~~ 182 (397)
.....+-. ..+... +.+ +. . + ..+.++ .|..
T Consensus 274 ~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN-tYt~ 352 (605)
T PLN02503 274 QRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD-TYVF 352 (605)
T ss_pred CCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC-hHHH
Confidence 53211111 110000 000 00 0 0 011122 3776
Q ss_pred HHHHHHHHhc--CCCeeEEEEcCCceeec----cCCCcch--hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 015961 183 EDILFEEVEK--KEELSWSVHRPDTIFGF----SPYSLMN--LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD 254 (397)
Q Consensus 183 e~~l~~~~~~--~~g~~~~ilRp~~v~G~----~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~ 254 (397)
.|.++|.... ..++|++|+||+.|.+. -||...+ ...++.... +.|.--.+++++. ...|++.+|
T Consensus 353 TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~----g~G~lr~~~~~~~---~~~DiVPVD 425 (605)
T PLN02503 353 TKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY----GKGQLTGFLADPN---GVLDVVPAD 425 (605)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhhe----eccceeEEEeCCC---eeEeEEeec
Confidence 6666665422 34699999999999542 2222222 222221111 1232223566665 556777777
Q ss_pred HHHHHHHHHhcC-C---CCCCCceeccCC--CeeehHHHHHHHHHHhCC
Q 015961 255 LIAEHQIWAAVD-P---YAKNEAFNCNNG--DVFKWKHLWKVLAEQFGI 297 (397)
Q Consensus 255 ~la~~~~~~~~~-~---~~~g~~yni~~~--~~~s~~el~~~i~~~~g~ 297 (397)
.++.+++.++.. . ...+++||++++ .+++|+|+.+.+.+.+..
T Consensus 426 ~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 426 MVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred HHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 778888777321 1 234789999988 889999999999987764
No 60
>PRK12320 hypothetical protein; Provisional
Probab=99.87 E-value=1.4e-20 Score=188.72 Aligned_cols=201 Identities=18% Similarity=0.188 Sum_probs=135.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 106 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~ 106 (397)
|+|||||||||||++|+++|++ +||+|++++|.+... ..++++++.+|++|+. +.+++.++|.|+|+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~-----~G~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~- 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIA-----AGHTVSGIAQHPHDA--LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD- 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEeCChhhc--ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC-
Confidence 3799999999999999999998 899999999975432 2257889999999985 778888999999997632
Q ss_pred cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH
Q 015961 107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL 186 (397)
Q Consensus 107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l 186 (397)
... ...+|+.|+.|++++|++.+ + +++++||. +|. . ..+...|.++
T Consensus 72 --~~~---~~~vNv~Gt~nLleAA~~~G--v-RiV~~SS~---------~G~----~-------------~~~~~aE~ll 117 (699)
T PRK12320 72 --TSA---PGGVGITGLAHVANAAARAG--A-RLLFVSQA---------AGR----P-------------ELYRQAETLV 117 (699)
T ss_pred --ccc---hhhHHHHHHHHHHHHHHHcC--C-eEEEEECC---------CCC----C-------------ccccHHHHHH
Confidence 111 23589999999999998865 3 46666632 221 0 0011234443
Q ss_pred HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhh-cCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961 187 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 265 (397)
Q Consensus 187 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~ 265 (397)
. .++++++++|++++||+ +........+..++ ... .+.++ .++|+ ++++.+++.++.
T Consensus 118 ~-----~~~~p~~ILR~~nVYGp--~~~~~~~r~I~~~l--~~~~~~~pI----------~vIyV---dDvv~alv~al~ 175 (699)
T PRK12320 118 S-----TGWAPSLVIRIAPPVGR--QLDWMVCRTVATLL--RSKVSARPI----------RVLHL---DDLVRFLVLALN 175 (699)
T ss_pred H-----hcCCCEEEEeCceecCC--CCcccHhHHHHHHH--HHHHcCCce----------EEEEH---HHHHHHHHHHHh
Confidence 3 34589999999999995 32111111111111 111 12232 23444 444677666654
Q ss_pred CCCCCCCceeccCCCeeehHHHHHHHHHH
Q 015961 266 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQ 294 (397)
Q Consensus 266 ~~~~~g~~yni~~~~~~s~~el~~~i~~~ 294 (397)
.. .+++|||++++.+|++|+++.+...
T Consensus 176 ~~--~~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 176 TD--RNGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred CC--CCCEEEEeCCCeeEHHHHHHHHHHh
Confidence 32 2359999999999999998888665
No 61
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.87 E-value=1.4e-20 Score=193.59 Aligned_cols=222 Identities=14% Similarity=0.050 Sum_probs=144.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCeeEEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIF 102 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~h~a 102 (397)
+.++||||||+||||++|+++|.+ +|++|.. ..+|++|.+.+...+. +.|.|+|+|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~-----~g~~v~~-----------------~~~~l~d~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEK-----QGIAYEY-----------------GKGRLEDRSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHh-----CCCeEEe-----------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence 346899999999999999999998 7888731 1246788888877776 467799999
Q ss_pred EecccC-----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC--CCCCCCCCCCCCCCC
Q 015961 103 YVTWTN-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK--PYDPPFTEDMPRLDA 175 (397)
Q Consensus 103 ~~~~~~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~--~~~~~~~E~~p~~~~ 175 (397)
+.+... ..++.+.+++|+.|+.+|+++|++.+ +++ ++.||..+|+. +... ....|++|++++.|.
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g--~~~-v~~Ss~~v~~~-----~~~~~~~~~~p~~E~~~~~~~ 508 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG--LLM-MNFATGCIFEY-----DAKHPEGSGIGFKEEDKPNFT 508 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC--CeE-EEEcccceecC-----CcccccccCCCCCcCCCCCCC
Confidence 865321 12678889999999999999999875 443 44455444421 1100 012467887755442
Q ss_pred CCcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 015961 176 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL 255 (397)
Q Consensus 176 ~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~ 255 (397)
...|+..|...|.+.+.+ -+..++|+.++||..+....|+...+ .+ ...++.++. ...++.++
T Consensus 509 -~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~------~~-~~~~~~vp~------~~~~~~~~-- 571 (668)
T PLN02260 509 -GSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKI------SR-YNKVVNIPN------SMTVLDEL-- 571 (668)
T ss_pred -CChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHH------hc-cceeeccCC------CceehhhH--
Confidence 234887777766553333 36778888888975443444655444 11 122223332 12233222
Q ss_pred HHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961 256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG 296 (397)
Q Consensus 256 la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g 296 (397)
+.+++.++.. ..+++||+++++.+||.|+++.+.+.++
T Consensus 572 -~~~~~~l~~~--~~~giyni~~~~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 572 -LPISIEMAKR--NLRGIWNFTNPGVVSHNEILEMYKDYID 609 (668)
T ss_pred -HHHHHHHHHh--CCCceEEecCCCcCcHHHHHHHHHHhcC
Confidence 3333433332 3358999999999999999999999874
No 62
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.86 E-value=6.7e-21 Score=176.20 Aligned_cols=211 Identities=15% Similarity=0.116 Sum_probs=141.9
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH------cc-CCCeeE
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL------SQ-LTDVTH 100 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~------~~-~~~V~h 100 (397)
+||||||||++|++++++|++ .|++|++++|++.... ..+++.+.+|+.|++++..++ .+ +|.|+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~-----~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQA-----ASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHh-----CCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 489999999999999999998 8999999999876432 257788899999999999998 56 777888
Q ss_pred EEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcch
Q 015961 101 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 180 (397)
Q Consensus 101 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y 180 (397)
++.. ... ....+.+++++|++.+ ++||+++|+...+ .+ . + .. .
T Consensus 74 ~~~~---~~~--------~~~~~~~~i~aa~~~g--v~~~V~~Ss~~~~------~~------------~---~-~~--~ 116 (285)
T TIGR03649 74 VAPP---IPD--------LAPPMIKFIDFARSKG--VRRFVLLSASIIE------KG------------G---P-AM--G 116 (285)
T ss_pred eCCC---CCC--------hhHHHHHHHHHHHHcC--CCEEEEeeccccC------CC------------C---c-hH--H
Confidence 7431 111 1234568999998864 8899988742111 00 0 0 00 1
Q ss_pred hHHHHHHHHHhcC-CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 015961 181 TLEDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 259 (397)
Q Consensus 181 ~~e~~l~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~ 259 (397)
..++ +. ++ .|++++++||+.+++.-.. .. ....+ . ..+ ++. .+.+.....+ .++.++|++
T Consensus 117 ~~~~----~l-~~~~gi~~tilRp~~f~~~~~~-~~-~~~~~------~-~~~-~~~-~~~g~~~~~~---v~~~Dva~~ 177 (285)
T TIGR03649 117 QVHA----HL-DSLGGVEYTVLRPTWFMENFSE-EF-HVEAI------R-KEN-KIY-SATGDGKIPF---VSADDIARV 177 (285)
T ss_pred HHHH----HH-HhccCCCEEEEeccHHhhhhcc-cc-ccccc------c-cCC-eEE-ecCCCCccCc---ccHHHHHHH
Confidence 1233 33 33 4899999999988862110 00 00001 1 112 222 2333333344 455555777
Q ss_pred HHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCC
Q 015961 260 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG 301 (397)
Q Consensus 260 ~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~ 301 (397)
+..++..+...++.||+++++.+|++|+++.+.+.+|++...
T Consensus 178 ~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~ 219 (285)
T TIGR03649 178 AYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITH 219 (285)
T ss_pred HHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEE
Confidence 777776666667889999999999999999999999987654
No 63
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.3e-20 Score=177.80 Aligned_cols=229 Identities=18% Similarity=0.142 Sum_probs=167.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHcc-
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~~- 94 (397)
.+|+||||||+|.||+.|++++++. +--+|+.++|+..+. .....++.++-||+.|.+.+..++++
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~----~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKF----NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhc----CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence 4799999999999999999999984 122699999986432 11235788999999999999999999
Q ss_pred -CCCeeEEEEecccCC--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961 95 -LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171 (397)
Q Consensus 95 -~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p 171 (397)
+|.|||.|+.-+++. .+|.+.+++|+.||.|+++||.+.+ +++|+.+||.+.
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~--V~~~V~iSTDKA----------------------- 379 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG--VKKFVLISTDKA----------------------- 379 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC--CCEEEEEecCcc-----------------------
Confidence 888999998777654 3899999999999999999999864 999999885331
Q ss_pred CCCCCCcchhH-----HHHHHHHHhcCC--CeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcccc
Q 015961 172 RLDAPNFYYTL-----EDILFEEVEKKE--ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAW 244 (397)
Q Consensus 172 ~~~~~~~~y~~-----e~~l~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 244 (397)
..|... |+. |+.+..+..+.. +..++++|+|+|.|+ .|+...++... |.+ |.|++.. +.+-.
T Consensus 380 V~PtNv--mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGS-rGSViPlFk~Q-----I~~--GgplTvT-dp~mt 448 (588)
T COG1086 380 VNPTNV--MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGS-RGSVIPLFKKQ-----IAE--GGPLTVT-DPDMT 448 (588)
T ss_pred cCCchH--hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecC-CCCCHHHHHHH-----HHc--CCCcccc-CCCce
Confidence 123222 554 444444431123 489999999999994 23333222111 333 5665543 33445
Q ss_pred ceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCC
Q 015961 245 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI 297 (397)
Q Consensus 245 ~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~ 297 (397)
+.+..+.+|.. .++.+... ...|++|-+--|+++++.|+++.+.+..|.
T Consensus 449 RyfMTI~EAv~---LVlqA~a~-~~gGeifvldMGepvkI~dLAk~mi~l~g~ 497 (588)
T COG1086 449 RFFMTIPEAVQ---LVLQAGAI-AKGGEIFVLDMGEPVKIIDLAKAMIELAGQ 497 (588)
T ss_pred eEEEEHHHHHH---HHHHHHhh-cCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence 68888989844 44444332 567899999989999999999999999984
No 64
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.86 E-value=1e-21 Score=176.22 Aligned_cols=225 Identities=21% Similarity=0.206 Sum_probs=143.9
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceE----EEccCCCHHHHHHHHc--
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEY----VQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~----~~~Dl~d~~~l~~~~~-- 93 (397)
||||||+|.||+.|+++|++. +-.+|++++|+.... . ...+++++ +.+|+.|.+.+..+++
T Consensus 1 VLVTGa~GSIGseL~rql~~~----~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRY----GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCC----B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhc----CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence 799999999999999999983 224799999985321 1 12234543 5899999999999999
Q ss_pred cCCCeeEEEEecccC--CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p 171 (397)
+.|.|||.|+.-+++ ..+|.+.+++|+.||+|++++|.+++ +++|+++||.+..
T Consensus 77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~--v~~~v~ISTDKAv---------------------- 132 (293)
T PF02719_consen 77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG--VERFVFISTDKAV---------------------- 132 (293)
T ss_dssp T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT---SEEEEEEECGCS----------------------
T ss_pred CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEccccccC----------------------
Confidence 677899999875553 34899999999999999999999874 8999999864422
Q ss_pred CCCCCCcchhHHHHHHHHH----hcCC---CeeEEEEcCCceeeccCCCcchhHHHHHHHHH-HhhhcCCCceecCCccc
Q 015961 172 RLDAPNFYYTLEDILFEEV----EKKE---ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA-VCKHEGIPLRFPGTKAA 243 (397)
Q Consensus 172 ~~~~~~~~y~~e~~l~~~~----~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~ 243 (397)
.|... |+.+|.+.|.. .... +..++++|+++|.|+. |+... .|.. +. .|.|+.... .+-
T Consensus 133 -~Ptnv--mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-GSVip------~F~~Qi~--~g~PlTvT~-p~m 199 (293)
T PF02719_consen 133 -NPTNV--MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-GSVIP------LFKKQIK--NGGPLTVTD-PDM 199 (293)
T ss_dssp -S--SH--HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-TSCHH------HHHHHHH--TTSSEEECE-TT-
T ss_pred -CCCcH--HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-CcHHH------HHHHHHH--cCCcceeCC-CCc
Confidence 12222 66544444432 1222 4799999999999942 33322 1221 23 366765433 344
Q ss_pred cceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCC
Q 015961 244 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE 298 (397)
Q Consensus 244 ~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~ 298 (397)
.+.+..+.+|..|+ +.++.. ...|++|.+--|+++++.|+++.+.+..|..
T Consensus 200 tRffmti~EAv~Lv---l~a~~~-~~~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 200 TRFFMTIEEAVQLV---LQAAAL-AKGGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp EEEEE-HHHHHHHH---HHHHHH---TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred EEEEecHHHHHHHH---HHHHhh-CCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 56888888884443 333322 3468899988899999999999999999964
No 65
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4.3e-20 Score=157.05 Aligned_cols=309 Identities=17% Similarity=0.158 Sum_probs=192.7
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC------CCCCceEEEccCCCHHHHHHHHc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN------ADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~------~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
|-.||||-||.-|++|++.|++ +||+|+++.|+++.- +. .........+|++|...+...+.
T Consensus 29 kvALITGItGQDGSYLaEfLL~-----KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLS-----KGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred eEEEEecccCCCchHHHHHHHh-----CCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 4679999999999999999999 899999999976431 11 11345678899999999999988
Q ss_pred cCCC--eeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961 94 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 167 (397)
Q Consensus 94 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~ 167 (397)
-+.+ |+|+|+.+++..+ -++...++...||..||+|++..+ .+++++- .|+++.||.. .+.|.+
T Consensus 104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQ--------AstSElyGkv--~e~PQs 173 (376)
T KOG1372|consen 104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQ--------ASTSELYGKV--QEIPQS 173 (376)
T ss_pred ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEe--------cccHhhcccc--cCCCcc
Confidence 8776 9999998775433 456667888899999999998752 2222221 4667789975 477889
Q ss_pred CCCCCCCCCCcchhHHHHHHHHHh----cCCCeeEEEEcCCceeec-cCCCcchhH-HHHHHHHH-HhhhcCCCceecCC
Q 015961 168 EDMPRLDAPNFYYTLEDILFEEVE----KKEELSWSVHRPDTIFGF-SPYSLMNLV-GALCVYAA-VCKHEGIPLRFPGT 240 (397)
Q Consensus 168 E~~p~~~~~~~~y~~e~~l~~~~~----~~~g~~~~ilRp~~v~G~-~~~~~~~~~-~~~~~~~~-i~~~~~~~~~~~g~ 240 (397)
|.+|..|.++ |+..|+..-++. +.+++=. .-++++-. +|+...||+ ..+....+ |..+ ...-...|+
T Consensus 174 E~TPFyPRSP--Ya~aKmy~~WivvNyREAYnmfA---cNGILFNHESPRRGenFVTRKItRsvakI~~g-qqe~~~LGN 247 (376)
T KOG1372|consen 174 ETTPFYPRSP--YAAAKMYGYWIVVNYREAYNMFA---CNGILFNHESPRRGENFVTRKITRSVAKISLG-QQEKIELGN 247 (376)
T ss_pred cCCCCCCCCh--hHHhhhhheEEEEEhHHhhccee---eccEeecCCCCccccchhhHHHHHHHHHhhhc-ceeeEEecc
Confidence 9999999877 666555432210 1111100 01233332 455566663 33433322 2221 122355888
Q ss_pred ccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcCCCCccccCHHH
Q 015961 241 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE 320 (397)
Q Consensus 241 ~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
.+..+++.+..|. +++ +|.+++...+ +.|-|+.++..|++|+++......|....- ..+..+-.+.+. .
T Consensus 248 L~a~RDWGhA~dY---VEA-MW~mLQ~d~P-dDfViATge~hsVrEF~~~aF~~ig~~l~W-eg~gv~~~~~n~-~---- 316 (376)
T KOG1372|consen 248 LSALRDWGHAGDY---VEA-MWLMLQQDSP-DDFVIATGEQHSVREFCNLAFAEIGEVLNW-EGEGVDEVGKND-D---- 316 (376)
T ss_pred hhhhcccchhHHH---HHH-HHHHHhcCCC-CceEEecCCcccHHHHHHHHHHhhCcEEee-cccccccccccC-C----
Confidence 8766666555544 555 4555554443 459999999999999999988888853210 000000000000 0
Q ss_pred HhccchHHHHHHHHHhCCCcccccccccchhhhhhhcCcccccchhhHHH-cCCCCccCCHHHHHHHHH
Q 015961 321 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID 388 (397)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~ 388 (397)
-+. +-.+++.-+.. -..+.+..|.+|+++ |||+|+.+..|-++++++
T Consensus 317 g~v-----------~V~v~~kYyRP----------tEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~ 364 (376)
T KOG1372|consen 317 GVV-----------RVKVDPKYYRP----------TEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVA 364 (376)
T ss_pred ceE-----------EEEecccccCc----------chhhhhcCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence 000 00011111100 011256689999986 799999999888887765
No 66
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=3.4e-19 Score=162.58 Aligned_cols=255 Identities=17% Similarity=0.087 Sum_probs=151.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------------C--CCCCCceEEEccCCCH----
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------------W--NADHLVEYVQCDVSDP---- 85 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------------~--~~~~~v~~~~~Dl~d~---- 85 (397)
++||+||||||+|.+|+.+|+... ..+|+|++|..+.+ + ....+|+++.||+..+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~----~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL 76 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS----DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL 76 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC----CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence 479999999999999999999842 34899999976521 1 1236899999999854
Q ss_pred --HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961 86 --EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 86 --~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
..++++...+|.|+|.++... ...++.+....||.||+.+++.|... +.+.++|+||+.++.......+ .
T Consensus 77 ~~~~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~~~~~-----~ 148 (382)
T COG3320 77 SERTWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEYYSNF-----T 148 (382)
T ss_pred CHHHHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccccCCC-----c
Confidence 567777788999999987532 23467888899999999999988763 4777888887766644211111 1
Q ss_pred CCCCCCCCCCC---CCCcchhHHHHHHHHHh---cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC-C-c
Q 015961 164 PPFTEDMPRLD---APNFYYTLEDILFEEVE---KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-P-L 235 (397)
Q Consensus 164 ~~~~E~~p~~~---~~~~~y~~e~~l~~~~~---~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~-~ 235 (397)
...+++.|... .....|+++|+.+|... .+.|++++|+||+.|.|.+.....|.-..+..++.....+|. | +
T Consensus 149 ~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~ 228 (382)
T COG3320 149 VDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS 228 (382)
T ss_pred cccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc
Confidence 11223333221 11234666555544431 234899999999999997653222222222222222222332 2 1
Q ss_pred eecCCccccceeeeccc--HHHHHHHHHHHhcCCCCCCCcee-ccCCCeeehHHHHHHHHH
Q 015961 236 RFPGTKAAWECYSIASD--ADLIAEHQIWAAVDPYAKNEAFN-CNNGDVFKWKHLWKVLAE 293 (397)
Q Consensus 236 ~~~g~~~~~~~~~~~~d--a~~la~~~~~~~~~~~~~g~~yn-i~~~~~~s~~el~~~i~~ 293 (397)
...-+...-+++.+... +..+++++..+..++......|+ ..-|..+...++.+-+.+
T Consensus 229 ~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 229 EYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred ccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 11111111112222222 23344333333323333334455 233778899988887777
No 67
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.83 E-value=2.5e-18 Score=191.18 Aligned_cols=338 Identities=15% Similarity=0.113 Sum_probs=193.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---------------C--CCCCceEEEccCCCH---
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------------N--ADHLVEYVQCDVSDP--- 85 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---------------~--~~~~v~~~~~Dl~d~--- 85 (397)
.++|||||||||+|++|+++|++.+.. ..++|+|+.|...... . ...+++++.+|+.++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~-~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSN-SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCC-CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 478999999999999999999973210 1378999999743210 0 013688999999744
Q ss_pred ---HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCC--
Q 015961 86 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-- 160 (397)
Q Consensus 86 ---~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-- 160 (397)
+.+..+..++|.|+|+|+.... ..+......+|+.|+.+++++|++. ++++++++||..+|+.. .+....
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~--~~~~~~~~ 1124 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHW-VYPYSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTE--YYVNLSDE 1124 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecC-ccCHHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcc--cccchhhh
Confidence 5566677789999999876432 2234555578999999999999875 36788999988777532 111100
Q ss_pred ---CCCCCCCCCCCCCC---CCCcchhHHHHHHHHHh---cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961 161 ---PYDPPFTEDMPRLD---APNFYYTLEDILFEEVE---KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE 231 (397)
Q Consensus 161 ---~~~~~~~E~~p~~~---~~~~~y~~e~~l~~~~~---~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~ 231 (397)
.....+.|+.+..+ .....|++.|++.+... .+.|++++++||+.|||++.....+....+...+.-....
T Consensus 1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443 1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence 00112333332211 11234776555444321 2358999999999999964332222212221111111112
Q ss_pred CCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCeeehHHHHHHHHHHhCCCCCCCCchhhcC
Q 015961 232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEG 309 (397)
Q Consensus 232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~ 309 (397)
+. +| .... ..+..+++++|.+++.++..+. ..+.+||++++..+++.++++.+.+. |.+..
T Consensus 1205 ~~---~p-~~~~---~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~--------- 1267 (1389)
T TIGR03443 1205 GL---IP-NINN---TVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE--------- 1267 (1389)
T ss_pred CC---cC-CCCC---ccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC---------
Confidence 21 12 1121 2344556667888887776543 23468999999899999999999764 55422
Q ss_pred CCCccccCHHHHhccchHHHHHHHHHhCCCcccccccccchhhh-hhhcCcccccchhhHHH-c-------CCCCc---c
Q 015961 310 GGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVD-LVLTGEAKLASMNKSKE-H-------GFSGF---R 377 (397)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~-l-------G~~p~---~ 377 (397)
..+..+|....... ....+ ...++.....+ |.+ .........+|.++.++ + |.... .
T Consensus 1268 -----~~~~~~w~~~l~~~----~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1336 (1389)
T TIGR03443 1268 -----IVDYVHWRKSLERF----VIERS-EDNALFPLLHF-VLDDLPQSTKAPELDDTNAATSLKADAAWTGVDVSSGAG 1336 (1389)
T ss_pred -----ccCHHHHHHHHHHh----ccccC-ccchhhhHHHH-hhccCcccccCCCCCCHHHHHHHHhhcccccCCCcCCCC
Confidence 24455665432100 00000 00111000000 000 00111144567777765 3 33322 2
Q ss_pred CCHHHHHHHHHHHhcCCCCC
Q 015961 378 NSKNSFITWIDKVKGFKIVP 397 (397)
Q Consensus 378 ~~~e~~~~~~~~~~~~~~~~ 397 (397)
-.++-|+.+++++++.|++|
T Consensus 1337 ~~~~~~~~~~~~~~~~~~l~ 1356 (1389)
T TIGR03443 1337 VTEEQIGIYIAYLVKVGFLP 1356 (1389)
T ss_pred CCHHHHHHHHHHHHHCCCCC
Confidence 35678889999999888874
No 68
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.82 E-value=2.2e-20 Score=169.07 Aligned_cols=167 Identities=23% Similarity=0.223 Sum_probs=93.4
Q ss_pred EEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC------------CC--------CCCCceEEEccCCCH---
Q 015961 31 IVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN------------WN--------ADHLVEYVQCDVSDP--- 85 (397)
Q Consensus 31 VtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~------------~~--------~~~~v~~~~~Dl~d~--- 85 (397)
|||||||+|++|+++|++ .+. +|+|+.|..... .. ...+++++.||++++
T Consensus 1 lTGaTGflG~~ll~~Ll~-----~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLR-----QPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHH-----HS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHc-----CCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 799999999999999998 443 899999976321 00 146899999999975
Q ss_pred ---HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCC
Q 015961 86 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 86 ---~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+++..+.+.++.|+|+|+..... .+..+..++|+.||+++++.|.... .++++++||..+.+. ..+.. .
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~--~~~~~~iSTa~v~~~---~~~~~--~ 147 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGK--RKRFHYISTAYVAGS---RPGTI--E 147 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS----TTT----
T ss_pred CChHHhhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhcc--CcceEEeccccccCC---CCCcc--c
Confidence 45666778899999998754332 2556688999999999999998643 348888887222221 11110 0
Q ss_pred CCC--CCCCCC-CCCCCCcchhHHHHHHHHHh----cCCCeeEEEEcCCceeecc
Q 015961 163 DPP--FTEDMP-RLDAPNFYYTLEDILFEEVE----KKEELSWSVHRPDTIFGFS 210 (397)
Q Consensus 163 ~~~--~~E~~p-~~~~~~~~y~~e~~l~~~~~----~~~g~~~~ilRp~~v~G~~ 210 (397)
+.. ..+... ........|.++|+++|... ++.|++++|+||+.|+|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~ 202 (249)
T PF07993_consen 148 EKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDS 202 (249)
T ss_dssp SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SS
T ss_pred ccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccC
Confidence 110 111111 11112335776555554431 3458999999999999953
No 69
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.80 E-value=1.3e-18 Score=157.89 Aligned_cols=234 Identities=15% Similarity=0.137 Sum_probs=146.1
Q ss_pred cCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCC-HHHHHHH
Q 015961 16 FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSD-PEETQAK 91 (397)
Q Consensus 16 ~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d-~~~l~~~ 91 (397)
-+++....+| ++||||||||+||++|+++|++ +||+|++++|++... .....+++++.+|+.| .+.+.+.
T Consensus 8 ~~~~~~~~~~-~~ilItGasG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~ 81 (251)
T PLN00141 8 SEEDAENVKT-KTVFVAGATGRTGKRIVEQLLA-----KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEA 81 (251)
T ss_pred cccccccccC-CeEEEECCCcHHHHHHHHHHHh-----CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHH
Confidence 3444445555 6899999999999999999998 899999999976432 1112468899999998 4667777
Q ss_pred H-ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961 92 L-SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 170 (397)
Q Consensus 92 ~-~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~ 170 (397)
+ .++|.|+|+++... ..++...+++|..++.++++++++.+ +++++++||..+|+.. ...+..+..
T Consensus 82 ~~~~~d~vi~~~g~~~--~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~iV~iSS~~v~g~~---------~~~~~~~~~ 148 (251)
T PLN00141 82 IGDDSDAVICATGFRR--SFDPFAPWKVDNFGTVNLVEACRKAG--VTRFILVSSILVNGAA---------MGQILNPAY 148 (251)
T ss_pred hhcCCCEEEECCCCCc--CCCCCCceeeehHHHHHHHHHHHHcC--CCEEEEEccccccCCC---------cccccCcch
Confidence 7 67888888754321 11223345789999999999998753 6889988876555321 011111110
Q ss_pred CCCCCCCc-chhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 015961 171 PRLDAPNF-YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI 249 (397)
Q Consensus 171 p~~~~~~~-~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~ 249 (397)
. ....+ .+...+...+.+.++.+++++++||+++++.... +.....++.. .+ ..
T Consensus 149 ~--~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~-------------------~~~~~~~~~~-~~---~~ 203 (251)
T PLN00141 149 I--FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT-------------------GNIVMEPEDT-LY---EG 203 (251)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC-------------------ceEEECCCCc-cc---cC
Confidence 0 00010 0112333333222567899999999999983111 0000011111 00 11
Q ss_pred cccHHHHHHHHHHHhcCCCCCCCceeccCC---CeeehHHHHHHHHH
Q 015961 250 ASDADLIAEHQIWAAVDPYAKNEAFNCNNG---DVFKWKHLWKVLAE 293 (397)
Q Consensus 250 ~~da~~la~~~~~~~~~~~~~g~~yni~~~---~~~s~~el~~~i~~ 293 (397)
..+..++|..+..++..+...+.++.+.+. -..++++++..+++
T Consensus 204 ~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 204 SISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 234566688888887776666777888762 23789988887754
No 70
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.76 E-value=5.4e-18 Score=146.17 Aligned_cols=149 Identities=24% Similarity=0.335 Sum_probs=107.7
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecccC
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN 108 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~ 108 (397)
|+|+||||++|++|+++|++ +|++|++++|++.+... ..+++++.+|+.|++++.+++.++|.|+|+++ ..
T Consensus 1 I~V~GatG~vG~~l~~~L~~-----~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~---~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLR-----RGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAG---PP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHH-----TTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCH---ST
T ss_pred eEEECCCChHHHHHHHHHHH-----CCCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhhcchhhhhhh---hh
Confidence 79999999999999999999 78999999998764321 47999999999999999999999999999853 22
Q ss_pred CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHH
Q 015961 109 RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFE 188 (397)
Q Consensus 109 ~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~ 188 (397)
.. ....+++++++|++.+ +++++++|+..+|... ........ .+....++...+...+
T Consensus 72 ~~--------~~~~~~~~~~a~~~~~--~~~~v~~s~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~e~ 129 (183)
T PF13460_consen 72 PK--------DVDAAKNIIEAAKKAG--VKRVVYLSSAGVYRDP----------PGLFSDED--KPIFPEYARDKREAEE 129 (183)
T ss_dssp TT--------HHHHHHHHHHHHHHTT--SSEEEEEEETTGTTTC----------TSEEEGGT--CGGGHHHHHHHHHHHH
T ss_pred cc--------cccccccccccccccc--cccceeeeccccCCCC----------Cccccccc--ccchhhhHHHHHHHHH
Confidence 12 2778889999999864 7899988876655321 11000000 0111122322223333
Q ss_pred HHhcCCCeeEEEEcCCceeec
Q 015961 189 EVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 189 ~~~~~~g~~~~ilRp~~v~G~ 209 (397)
.. ++.+++|+++||+.+||.
T Consensus 130 ~~-~~~~~~~~ivrp~~~~~~ 149 (183)
T PF13460_consen 130 AL-RESGLNWTIVRPGWIYGN 149 (183)
T ss_dssp HH-HHSTSEEEEEEESEEEBT
T ss_pred HH-HhcCCCEEEEECcEeEeC
Confidence 33 556999999999999995
No 71
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.75 E-value=2.1e-16 Score=137.65 Aligned_cols=229 Identities=15% Similarity=0.138 Sum_probs=158.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
.+--+-|+|||||+|.+++.+|.+ .|-+|++--|..+.. .-+...+-+...|+.|+++++++++..+.|
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak-----~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVV 134 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAK-----MGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVV 134 (391)
T ss_pred cceEEEEecccccccHHHHHHHhh-----cCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEE
Confidence 344567999999999999999999 788999888865432 112356778899999999999999999999
Q ss_pred eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCC--
Q 015961 99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP-- 176 (397)
Q Consensus 99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~-- 176 (397)
+++.+.-+-. ....+.++|+.+.+.|...|++.+ +.+++.+|. .|.. +. .+..
T Consensus 135 INLIGrd~eT--knf~f~Dvn~~~aerlAricke~G--VerfIhvS~----------Lgan------v~-----s~Sr~L 189 (391)
T KOG2865|consen 135 INLIGRDYET--KNFSFEDVNVHIAERLARICKEAG--VERFIHVSC----------LGAN------VK-----SPSRML 189 (391)
T ss_pred EEeecccccc--CCcccccccchHHHHHHHHHHhhC--hhheeehhh----------cccc------cc-----ChHHHH
Confidence 9997643221 223456899999999999999875 788887762 2210 00 0000
Q ss_pred CcchhHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec-CCccccceeeecccHHH
Q 015961 177 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP-GTKAAWECYSIASDADL 255 (397)
Q Consensus 177 ~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-g~~~~~~~~~~~~da~~ 255 (397)
...+..|+.+.++. -+.+|+||+.|||...+ ..|. |+.+.+..+ .+++. +.......-+++.|+
T Consensus 190 rsK~~gE~aVrdaf-----PeAtIirPa~iyG~eDr-fln~------ya~~~rk~~-~~pL~~~GekT~K~PVyV~DV-- 254 (391)
T KOG2865|consen 190 RSKAAGEEAVRDAF-----PEATIIRPADIYGTEDR-FLNY------YASFWRKFG-FLPLIGKGEKTVKQPVYVVDV-- 254 (391)
T ss_pred HhhhhhHHHHHhhC-----Ccceeechhhhcccchh-HHHH------HHHHHHhcC-ceeeecCCcceeeccEEEehH--
Confidence 11133355554433 46899999999994322 2221 222234333 23332 223334455566665
Q ss_pred HHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCC
Q 015961 256 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED 299 (397)
Q Consensus 256 la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~ 299 (397)
|.+++.++..+...|++|..+++..+.+.||++.+-+..-+-.
T Consensus 255 -aa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ 297 (391)
T KOG2865|consen 255 -AAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWP 297 (391)
T ss_pred -HHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhhcc
Confidence 8888888888899999999999999999999999988876533
No 72
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.74 E-value=3e-17 Score=160.30 Aligned_cols=227 Identities=15% Similarity=0.096 Sum_probs=142.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------C----------CCCCceEEEccCCCHH
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------N----------ADHLVEYVQCDVSDPE 86 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~----------~~~~v~~~~~Dl~d~~ 86 (397)
..++++||||||+|+||++++++|++ .|++|++++|+..... . ...+++++.+|+.|.+
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk-----~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLK-----LGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 34568999999999999999999998 8999999999754210 0 0135789999999999
Q ss_pred HHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961 87 ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 166 (397)
Q Consensus 87 ~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~ 166 (397)
++.+++.++|.|+|+++.......+....+++|+.|+.+++++|++.+ +.+|+++||...+ ..+ .+
T Consensus 152 sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag--VgRIV~VSSiga~-----~~g------~p- 217 (576)
T PLN03209 152 QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK--VNHFILVTSLGTN-----KVG------FP- 217 (576)
T ss_pred HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC--CCEEEEEccchhc-----ccC------cc-
Confidence 999999999999998764321112345567899999999999998754 7789988864321 011 00
Q ss_pred CCCCCCCCCCCcch-hHHHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 015961 167 TEDMPRLDAPNFYY-TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 245 (397)
Q Consensus 167 ~E~~p~~~~~~~~y-~~e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 245 (397)
.. ... ....| ...+.+++.+ ...|+++++|||+.+.++..+.... ..+ . ...++ .
T Consensus 218 -~~-~~~--sk~~~~~~KraaE~~L-~~sGIrvTIVRPG~L~tp~d~~~~t--~~v------------~-~~~~d-~--- 273 (576)
T PLN03209 218 -AA-ILN--LFWGVLCWKRKAEEAL-IASGLPYTIVRPGGMERPTDAYKET--HNL------------T-LSEED-T--- 273 (576)
T ss_pred -cc-chh--hHHHHHHHHHHHHHHH-HHcCCCEEEEECCeecCCccccccc--cce------------e-ecccc-c---
Confidence 00 000 11112 2233333333 5679999999999998731111000 000 0 00000 0
Q ss_pred eeeecccHHHHHHHHHHHhcCCC-CCCCceeccCCCeeehHHHHHHHH
Q 015961 246 CYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNGDVFKWKHLWKVLA 292 (397)
Q Consensus 246 ~~~~~~da~~la~~~~~~~~~~~-~~g~~yni~~~~~~s~~el~~~i~ 292 (397)
.+.....-.++|..+++++.++. ..+.+|.+.++.......+.+.+.
T Consensus 274 ~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 274 LFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred cCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHH
Confidence 00111233456888888777554 568899999876443344444443
No 73
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.73 E-value=5.9e-17 Score=149.12 Aligned_cols=229 Identities=13% Similarity=0.080 Sum_probs=142.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
|.|+||||||+||||++++++|++ +|++|+++.|++... . ....++.++.+|++|.+++.+++.
T Consensus 1 m~k~vlVtGasg~IG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (276)
T PRK06482 1 MSKTWFITGASSGFGRGMTERLLA-----RGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALG 75 (276)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999998 899999999975321 0 012468899999999988776654
Q ss_pred cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
.+|.|+|+++...... +.....+++|+.++.++++++... .....+++++||...+ .+ .
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~------~- 142 (276)
T PRK06482 76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ------IA------Y- 142 (276)
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc------cC------C-
Confidence 3677999887543211 134567789999999999997432 1235678877642111 00 0
Q ss_pred CCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCce---eeccCCCc--ch-h-HHHHHHHHHHhhhc
Q 015961 166 FTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTI---FGFSPYSL--MN-L-VGALCVYAAVCKHE 231 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v---~G~~~~~~--~~-~-~~~~~~~~~i~~~~ 231 (397)
| + ...|+. +.++..+.. ..+|++++++||+.+ ||.+.... .. . ......+ .+..
T Consensus 143 -----~--~--~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 210 (276)
T PRK06482 143 -----P--G--FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDL---RRAL 210 (276)
T ss_pred -----C--C--CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHH---HHHH
Confidence 0 1 112553 333333221 246899999999987 65322110 00 0 0001011 1111
Q ss_pred -CCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961 232 -GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG 296 (397)
Q Consensus 232 -~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g 296 (397)
..++. . ..|.++++.+++.++..+ ..+..||++++...+++|+++.+.+.++
T Consensus 211 ~~~~~~---------~---~~d~~~~~~a~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 211 ADGSFA---------I---PGDPQKMVQAMIASADQT-PAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred hhccCC---------C---CCCHHHHHHHHHHHHcCC-CCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 11101 0 134566688888877543 3456799999988999988888877664
No 74
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.73 E-value=4.8e-17 Score=154.32 Aligned_cols=258 Identities=19% Similarity=0.193 Sum_probs=158.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCC-CCCCCCcEEEEEeCCCCCC--------C--------------CCCCCceEEEcc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN--------W--------------NADHLVEYVQCD 81 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~-~~~~~g~~V~~l~R~~~~~--------~--------------~~~~~v~~~~~D 81 (397)
.+|+|||||||||+|+-|+++|++. +.+. +|+.+.|.+... + ....++..+.||
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~---~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVK---RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcc---eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 4689999999999999999999874 3443 899999975422 0 012467789999
Q ss_pred CCCH------HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccc
Q 015961 82 VSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEA 155 (397)
Q Consensus 82 l~d~------~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~ 155 (397)
+.++ .+++.....++.|+|+|+.... .+..+....+|..||+++++.|++. .+++-++++|++.+.+-....
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrF-de~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n~~~~~i 165 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRF-DEPLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSNCNVGHI 165 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeecc-chhhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhheecccccc
Confidence 9865 4566677888999999875332 2244556789999999999999985 568888888875544211101
Q ss_pred cCCCCCCCC--C------CCCCC---------CC--CCCCCcchhH-----HHHHHHHHhcCCCeeEEEEcCCceeecc-
Q 015961 156 FGKIKPYDP--P------FTEDM---------PR--LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFS- 210 (397)
Q Consensus 156 ~g~~~~~~~--~------~~E~~---------p~--~~~~~~~y~~-----e~~l~~~~~~~~g~~~~ilRp~~v~G~~- 210 (397)
....++... + ..|+. |. ...++. |.. |.++.+ ...++|++|+||+.|....
T Consensus 166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNT-YtfTKal~E~~i~~---~~~~lPivIiRPsiI~st~~ 241 (467)
T KOG1221|consen 166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNT-YTFTKALAEMVIQK---EAENLPLVIIRPSIITSTYK 241 (467)
T ss_pred cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCc-eeehHhhHHHHHHh---hccCCCeEEEcCCceecccc
Confidence 000000000 0 11111 00 011222 333 444444 4567999999999999852
Q ss_pred ---CCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC-CC----CCCCceeccCCC--
Q 015961 211 ---PYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD-PY----AKNEAFNCNNGD-- 280 (397)
Q Consensus 211 ---~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~-~~----~~g~~yni~~~~-- 280 (397)
||+..|.-.+.++.+. -+.|.--.+.++.. .+.|+..+|.++.+++.++-. .. ....+||++++.
T Consensus 242 EP~pGWidn~~gp~g~i~g--~gkGvlr~~~~d~~---~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~N 316 (467)
T KOG1221|consen 242 EPFPGWIDNLNGPDGVIIG--YGKGVLRCFLVDPK---AVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDN 316 (467)
T ss_pred CCCCCccccCCCCceEEEE--eccceEEEEEEccc---cccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccC
Confidence 2332232111111100 01121112334433 677888888888888866522 11 124599999854
Q ss_pred eeehHHHHHHHHHHhC
Q 015961 281 VFKWKHLWKVLAEQFG 296 (397)
Q Consensus 281 ~~s~~el~~~i~~~~g 296 (397)
+++|.++.+...+.+-
T Consensus 317 p~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 317 PVTWGDFIELALRYFE 332 (467)
T ss_pred cccHHHHHHHHHHhcc
Confidence 4999999998888765
No 75
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.71 E-value=3.6e-17 Score=146.71 Aligned_cols=224 Identities=16% Similarity=0.199 Sum_probs=140.4
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEec
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT 105 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~ 105 (397)
|+||||||.+|+++++.|++ .+++|++++|++... .+...+++++.+|+.|.+++.++++++|.|+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~-----~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~--- 72 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-----AGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVT--- 72 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-----TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEES---
T ss_pred CEEECCccHHHHHHHHHHHh-----CCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeec---
Confidence 79999999999999999999 799999999987432 1123578899999999999999999999887762
Q ss_pred ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 015961 106 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI 185 (397)
Q Consensus 106 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~ 185 (397)
.... ...+....++++||++++ ++||++.| ++.. . .+.....|. ...+.....
T Consensus 73 ~~~~-------~~~~~~~~~li~Aa~~ag--Vk~~v~ss-----------~~~~----~--~~~~~~~p~-~~~~~~k~~ 125 (233)
T PF05368_consen 73 PPSH-------PSELEQQKNLIDAAKAAG--VKHFVPSS-----------FGAD----Y--DESSGSEPE-IPHFDQKAE 125 (233)
T ss_dssp SCSC-------CCHHHHHHHHHHHHHHHT---SEEEESE-----------ESSG----T--TTTTTSTTH-HHHHHHHHH
T ss_pred Ccch-------hhhhhhhhhHHHhhhccc--cceEEEEE-----------eccc----c--ccccccccc-chhhhhhhh
Confidence 2111 223445668999999875 99998543 1110 0 111111111 112333344
Q ss_pred HHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 015961 186 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 265 (397)
Q Consensus 186 l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~ 265 (397)
+.++. ++.+++++++||+..+... ...+..... .+.....+.+++++.....+. .+..++++++..++.
T Consensus 126 ie~~l-~~~~i~~t~i~~g~f~e~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~Dvg~~va~il~ 194 (233)
T PF05368_consen 126 IEEYL-RESGIPYTIIRPGFFMENL-------LPPFAPVVD-IKKSKDVVTLPGPGNQKAVPV--TDTRDVGRAVAAILL 194 (233)
T ss_dssp HHHHH-HHCTSEBEEEEE-EEHHHH-------HTTTHHTTC-SCCTSSEEEEETTSTSEEEEE--EHHHHHHHHHHHHHH
T ss_pred hhhhh-hhccccceeccccchhhhh-------hhhhccccc-ccccceEEEEccCCCcccccc--ccHHHHHHHHHHHHc
Confidence 44554 5669999999988776621 110100000 000011234455444322232 355556777777776
Q ss_pred CCCCC--CCceeccCCCeeehHHHHHHHHHHhCCCC
Q 015961 266 DPYAK--NEAFNCNNGDVFKWKHLWKVLAEQFGIED 299 (397)
Q Consensus 266 ~~~~~--g~~yni~~~~~~s~~el~~~i~~~~g~~~ 299 (397)
++... ++.+++++ +.+|++|+++.+.+.+|++.
T Consensus 195 ~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 195 DPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp SGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEE
T ss_pred ChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCcc
Confidence 66544 67777765 88999999999999999874
No 76
>PRK09135 pteridine reductase; Provisional
Probab=99.70 E-value=7.6e-16 Score=139.29 Aligned_cols=214 Identities=16% Similarity=0.130 Sum_probs=129.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHcc-
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~~- 94 (397)
++++||||||+||||++++++|++ +|++|++++|+.... . .....+.++.+|++|.+++..+++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 79 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHA-----AGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAAC 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 457899999999999999999998 899999999864221 0 0113577899999999988777664
Q ss_pred ------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecCCccccccccccCCCCC
Q 015961 95 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 95 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
+|.|+|+++...... ++....+++|+.|+.++++++...- ..-..++..++ ..
T Consensus 80 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~---------~~----- 145 (249)
T PRK09135 80 VAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD---------IH----- 145 (249)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC---------hh-----
Confidence 578999977432211 1356678999999999999986531 11122322221 11
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhc-CCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 235 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (397)
+..|..+... |+. +.++..+..+ ..+++++++||+.++|+......+ ...... .. .+.++
T Consensus 146 ------~~~~~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~---~~~~~~-~~--~~~~~ 211 (249)
T PRK09135 146 ------AERPLKGYPV--YCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD---EEARQA-IL--ARTPL 211 (249)
T ss_pred ------hcCCCCCchh--HHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCC---HHHHHH-HH--hcCCc
Confidence 1122222222 553 4444444311 136999999999999953221111 111100 01 11121
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCC-CCCCCceeccCCCeee
Q 015961 236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP-YAKNEAFNCNNGDVFK 283 (397)
Q Consensus 236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~-~~~g~~yni~~~~~~s 283 (397)
... .+.+++|+++.+++... ...|++||++++..++
T Consensus 212 ~~~------------~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 212 KRI------------GTPEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred CCC------------cCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 101 12455677775555432 3468899999987655
No 77
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.2e-15 Score=135.27 Aligned_cols=217 Identities=22% Similarity=0.173 Sum_probs=132.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
++++||||||+|+||++++++|++ +|++|++++|+.... +. ...++.++.+|++|++++..+++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAG-----AGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAR 79 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 458999999999999999999998 899999999865321 00 11356789999999998876665
Q ss_pred ----cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCC
Q 015961 94 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED 169 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~ 169 (397)
.+|.|+|+|+.......++...+++|+.++.++++++.+...+-.+++++||.... +. +..+.
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~------~~-------~~~~~ 146 (248)
T PRK07806 80 EEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH------FI-------PTVKT 146 (248)
T ss_pred HhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh------cC-------ccccC
Confidence 46778888754222222456678899999999999998652222467767642111 10 00111
Q ss_pred CCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCc-
Q 015961 170 MPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK- 241 (397)
Q Consensus 170 ~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~- 241 (397)
.|. ...|+. |.++..+.. ...++++++++|+.+-++- ...+. .+ ..+ +..
T Consensus 147 ~~~----~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~-------~~~~~-----~~--~~~----~~~~ 204 (248)
T PRK07806 147 MPE----YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV-------TATLL-----NR--LNP----GAIE 204 (248)
T ss_pred Ccc----ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch-------hhhhh-----cc--CCH----HHHH
Confidence 111 112553 444433321 3467999999988776621 01110 00 000 000
Q ss_pred cccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCe
Q 015961 242 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV 281 (397)
Q Consensus 242 ~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~ 281 (397)
..........++.++|.++++++......|++|++++++.
T Consensus 205 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 205 ARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADY 244 (248)
T ss_pred HHHhhhcccCCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence 0001122445666778888888876666799999998764
No 78
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.64 E-value=1.1e-14 Score=131.89 Aligned_cols=214 Identities=15% Similarity=0.052 Sum_probs=130.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
+.++++||||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|+.|.+++.+.++
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAA-----DGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAG 77 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 34668999999999999999999998 899999999974321 0 011357889999999998877775
Q ss_pred -----cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961 94 -----QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK 160 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~ 160 (397)
.+|.|+|+++..... . .+....+++|+.++.++++++... ..+..+++++|+...+.
T Consensus 78 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~---------- 147 (251)
T PRK12826 78 VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR---------- 147 (251)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc----------
Confidence 467789987643321 1 134667899999999999987532 12356777776532220
Q ss_pred CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCC
Q 015961 161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI 233 (397)
Q Consensus 161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~ 233 (397)
.+ ... ...|+. +.++..+. ....+++++++||+.++|+....... ..+ ..... ...
T Consensus 148 ---~~------~~~--~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~---~~~~~-~~~ 210 (251)
T PRK12826 148 ---VG------YPG--LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--AQW---AEAIA-AAI 210 (251)
T ss_pred ---cC------CCC--ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--hHH---HHHHH-hcC
Confidence 00 001 112443 33333322 13458999999999999943221111 000 00000 111
Q ss_pred CceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCC
Q 015961 234 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD 280 (397)
Q Consensus 234 ~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~ 280 (397)
|+. ...++.++|..+..++.... ..|++|++.+|.
T Consensus 211 ~~~------------~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 211 PLG------------RLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred CCC------------CCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 210 12344555777766654432 358899987654
No 79
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.63 E-value=3.3e-15 Score=137.42 Aligned_cols=235 Identities=13% Similarity=-0.049 Sum_probs=139.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
|+++||||||+|+||++++++|++ +|++|++++|++... ......+.++++|++|.+++.+.+.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALE-----RGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999998 899999999975321 0012357788999999988766654
Q ss_pred cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
.+|.|+|+|+...... ++....+++|+.++.++++++... ..+..+++++||...+.+ .
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~- 143 (275)
T PRK08263 77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA------------F- 143 (275)
T ss_pred CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC------------C-
Confidence 3577889877543211 145677899999998887776321 112457777765322211 0
Q ss_pred CCCCCCCCCCCCcchhHHHH-----HHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceec
Q 015961 166 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP 238 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (397)
+ ....|+..|. ...+. ....|++++++||+.+..+..+...........+..+......
T Consensus 144 --------~-~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----- 209 (275)
T PRK08263 144 --------P-MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE----- 209 (275)
T ss_pred --------C-CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH-----
Confidence 0 0112543222 22221 1346899999999988763211100000000000000000000
Q ss_pred CCccccceeeec-ccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhC
Q 015961 239 GTKAAWECYSIA-SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG 296 (397)
Q Consensus 239 g~~~~~~~~~~~-~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g 296 (397)
.. ....+ .+..++|+.++.++..+...++.|+.+.+..+++.++.+.+.++.+
T Consensus 210 --~~---~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 210 --QW---SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred --HH---HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 00 00112 4556678888887766555566555445567899999999888643
No 80
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=1e-14 Score=131.71 Aligned_cols=212 Identities=17% Similarity=0.105 Sum_probs=130.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
++++||||||||+||++|+++|++ +|++|+++.|+..... ....++.++.+|+.|.+++.++++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLAR-----AGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAV 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHH
Confidence 347999999999999999999998 8999988887653210 112468899999999998877664
Q ss_pred ----cCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961 94 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
.+|.|+|+++...... . .....+++|+.++.++++++... .....+++++||...+. +.
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~------~~--- 150 (249)
T PRK12825 80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP------GW--- 150 (249)
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC------CC---
Confidence 4577999887432211 1 34567889999999999887432 12367888777433221 10
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCC
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP 234 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~ 234 (397)
.. ...|+. +.++..+. ....+++++++||+.++|+..... ..... . ......+
T Consensus 151 -----------~~--~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~-~----~~~~~~~ 210 (249)
T PRK12825 151 -----------PG--RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT--IEEAR-E----AKDAETP 210 (249)
T ss_pred -----------CC--chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc--cchhH-H----hhhccCC
Confidence 01 112443 33333222 134689999999999999421111 10000 0 0000111
Q ss_pred ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCee
Q 015961 235 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF 282 (397)
Q Consensus 235 ~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~ 282 (397)
+......++++..+.+++.+. ...|++|+++++..+
T Consensus 211 ------------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 211 ------------LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred ------------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence 011233455577777776543 245899999987543
No 81
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.62 E-value=8.6e-14 Score=127.76 Aligned_cols=224 Identities=16% Similarity=0.114 Sum_probs=147.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 106 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~ 106 (397)
++|||||||||+|++++++|++ .|++|++++|++........++++..+|+.++..+...+.+++.++++.....
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~-----~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~ 75 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLA-----RGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD 75 (275)
T ss_pred CeEEEEecccchHHHHHHHHHh-----CCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccccEEEEEecccc
Confidence 4799999999999999999999 89999999998764321117899999999999999999999998888754322
Q ss_pred cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchhHHHHH
Q 015961 107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL 186 (397)
Q Consensus 107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~e~~l 186 (397)
... ...........+..+++. ..+.+++++| +++.. . .+...|...+..
T Consensus 76 ---~~~-~~~~~~~~~~~~~a~~a~---~~~~~~~~~s----------~~~~~--------~------~~~~~~~~~~~~ 124 (275)
T COG0702 76 ---GSD-AFRAVQVTAVVRAAEAAG---AGVKHGVSLS----------VLGAD--------A------ASPSALARAKAA 124 (275)
T ss_pred ---ccc-chhHHHHHHHHHHHHHhc---CCceEEEEec----------cCCCC--------C------CCccHHHHHHHH
Confidence 111 233444445455555544 2366777554 33310 0 011225554444
Q ss_pred HHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 015961 187 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD 266 (397)
Q Consensus 187 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~ 266 (397)
.+......|++++++|+..+|. .. .... . . .....+.++...+.+ .......++++..+..+...
T Consensus 125 ~e~~l~~sg~~~t~lr~~~~~~--~~--~~~~--~--~--~~~~~~~~~~~~~~~-----~~~~i~~~d~a~~~~~~l~~ 189 (275)
T COG0702 125 VEAALRSSGIPYTTLRRAAFYL--GA--GAAF--I--E--AAEAAGLPVIPRGIG-----RLSPIAVDDVAEALAAALDA 189 (275)
T ss_pred HHHHHHhcCCCeEEEecCeeee--cc--chhH--H--H--HHHhhCCceecCCCC-----ceeeeEHHHHHHHHHHHhcC
Confidence 4444467899999999777766 11 1110 0 0 012224443322222 12333445556666655666
Q ss_pred CCCCCCceeccCCCeeehHHHHHHHHHHhCCCCCC
Q 015961 267 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG 301 (397)
Q Consensus 267 ~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~~ 301 (397)
+...+++|.+++++..+..|+.+.+.+..|++...
T Consensus 190 ~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 190 PATAGRTYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred CcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence 66778999999999999999999999999988665
No 82
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.61 E-value=1.1e-14 Score=132.68 Aligned_cols=161 Identities=12% Similarity=-0.002 Sum_probs=103.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
++++||||||+|+||++++++|++ .|++|++++|++... . .....+.++++|++|.+.+.+++..
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELAR-----AGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE 80 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999976321 0 0123567899999999888776653
Q ss_pred ----CCCeeEEEEecccCC------CcHHHHHHhHHHH----HHHHHHHH-cccCCCcceEEEecCCccccccccccCCC
Q 015961 95 ----LTDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAV-IPNAPNLRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~-~~~~~~~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
+|.|+|+++...... +..+..+++|+.+ ++++++++ +.. ...+++++||...+ ++
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~~~~iv~~ss~~~~------~~-- 150 (262)
T PRK13394 81 RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD--RGGVVIYMGSVHSH------EA-- 150 (262)
T ss_pred HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CCcEEEEEcchhhc------CC--
Confidence 677999987532211 1345667899999 67777777 432 35678877752211 11
Q ss_pred CCCCCCCCCCCCCCCCCCcchhHHHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
.+ +.........+.+.++..+.. ...+++++++||+.++++
T Consensus 151 ----~~-----~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~ 193 (262)
T PRK13394 151 ----SP-----LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTP 193 (262)
T ss_pred ----CC-----CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccch
Confidence 00 000000011112333322221 235799999999999984
No 83
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.60 E-value=4.5e-14 Score=129.91 Aligned_cols=227 Identities=15% Similarity=0.114 Sum_probs=138.3
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC---CCCCceEEEccCCCHHHHHHHHc---
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
+++||||||+|+||++++++|++ +|++|++++|+.... .. ...++.++.+|+.|++++...++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVA-----AGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999975321 00 01357789999999988877665
Q ss_pred ----cCCCeeEEEEeccc--C---CC--cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCC
Q 015961 94 ----QLTDVTHIFYVTWT--N---RS--TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIK 160 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~--~---~~--~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~ 160 (397)
.+|.++|+++.... . .+ .....+++|+.++.++++++.+.. .+-.+++++||...+ .
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~-------~--- 151 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS-------N--- 151 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc-------C---
Confidence 56889998864211 1 11 345677899999999988775531 123466766643221 1
Q ss_pred CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhh-cC
Q 015961 161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EG 232 (397)
Q Consensus 161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~-~~ 232 (397)
.. + + ...|+. +.++..+.. ...+++++++||+.+.++-...... .... . ... ..
T Consensus 152 --~~------~--~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~---~--~~~~~~ 213 (276)
T PRK05875 152 --TH------R--W--FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPEL---S--ADYRAC 213 (276)
T ss_pred --CC------C--C--CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHH---H--HHHHcC
Confidence 00 0 1 112443 333333321 2357999999999887631111000 0001 0 000 01
Q ss_pred CCceecCCccccceeeecccHHHHHHHHHHHhcCCCC--CCCceeccCCCee----ehHHHHHHHHHHhCC
Q 015961 233 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYA--KNEAFNCNNGDVF----KWKHLWKVLAEQFGI 297 (397)
Q Consensus 233 ~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~--~g~~yni~~~~~~----s~~el~~~i~~~~g~ 297 (397)
.++ ....++.++|.++++++..+.. .|++||++++..+ +..|+++.+.+..|.
T Consensus 214 ~~~------------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 214 TPL------------PRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred CCC------------CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence 111 1122345567777777765433 3889999988776 777777776655544
No 84
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.59 E-value=9.2e-15 Score=132.72 Aligned_cols=156 Identities=14% Similarity=0.095 Sum_probs=101.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCceEEEccCCCHHHHHHHH-------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKL------- 92 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~l~~~~------- 92 (397)
++||||||+|+||++|+++|++ +|++|++++|++... . ....++.++.+|+.|.+++..++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAA-----AGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF 76 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 6899999999999999999998 899999999975321 0 01235788999999998665544
Q ss_pred ccCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 93 SQLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 93 ~~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
..+|.|+|+++...... + +....+++|+.|+.++++++... .....+++++|+...+. + .
T Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~------~------~ 144 (255)
T TIGR01963 77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV------A------S 144 (255)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC------C------C
Confidence 34577888876533211 1 23556789999988888877432 12356788777532221 1 0
Q ss_pred CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
+. ... |.. +.+...+. ....+++++++||+.++++
T Consensus 145 ~~--------~~~--y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~ 186 (255)
T TIGR01963 145 PF--------KSA--YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTP 186 (255)
T ss_pred CC--------Cch--hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 00 011 332 22222221 0235899999999999983
No 85
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.58 E-value=1.7e-14 Score=131.19 Aligned_cols=156 Identities=15% Similarity=0.048 Sum_probs=102.1
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+++||||||+|+||++++++|++ +|++|++++|++... . ....++.++.+|++|++++.+++.
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAK-----EGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999998 899999999975431 0 012467789999999998877665
Q ss_pred --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.|+|+++...... +.....+++|+.++.++++++... .....+++++||...+ ++.
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~------~~~----- 147 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL------VGS----- 147 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc------cCC-----
Confidence 4677888876432211 133456788999955555544322 1236788887753222 110
Q ss_pred CCCCCCCCCCCCCCcchhH-----H---HHHHHHHhcCCCeeEEEEcCCceeec
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----E---DILFEEVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e---~~l~~~~~~~~g~~~~ilRp~~v~G~ 209 (397)
+ .... |+. + +.+.... ...++.++++||+.++++
T Consensus 148 -~--------~~~~--y~~~k~a~~~~~~~l~~~~-~~~~i~v~~~~pg~v~~~ 189 (258)
T PRK12429 148 -A--------GKAA--YVSAKHGLIGLTKVVALEG-ATHGVTVNAICPGYVDTP 189 (258)
T ss_pred -C--------Ccch--hHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCCcch
Confidence 0 0111 322 2 2222222 456899999999999984
No 86
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.58 E-value=3.2e-14 Score=129.48 Aligned_cols=230 Identities=13% Similarity=0.039 Sum_probs=137.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ----- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~----- 94 (397)
|++++|||||+|+||.+++++|++ +|++|++++|++... .....++.++.+|+.|.+++..++..
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFLA-----AGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER 75 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999998 899999999975421 01123578899999999988776653
Q ss_pred --CCCeeEEEEecccCC---Cc---HHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 95 --LTDVTHIFYVTWTNR---ST---EAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 95 --~~~V~h~a~~~~~~~---~~---~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
+|.|+|+++...... .+ ....+++|+.++.++++++... ..+..+++++||...+. .+|
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~------- 144 (257)
T PRK07074 76 GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA----ALG------- 144 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC----CCC-------
Confidence 677888876432111 12 2334678999998888887432 12245677776422110 111
Q ss_pred CCCCCCCCCCCCCcchhHHHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 015961 165 PFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA 242 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ 242 (397)
.+ .......+.+.++..+.. ...|+++..+||+.++++.-.........+.. ... ...
T Consensus 145 -----~~--~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~--~~~--------- 204 (257)
T PRK07074 145 -----HP--AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFE--ELK--KWY--------- 204 (257)
T ss_pred -----Cc--ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHH--HHH--hcC---------
Confidence 00 000111222333333321 33579999999999988421110000001100 000 011
Q ss_pred ccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeeehHHHHHHHHH
Q 015961 243 AWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAE 293 (397)
Q Consensus 243 ~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s~~el~~~i~~ 293 (397)
...+..++++++.++++++... ...|+++++.++...+.+||++.+.+
T Consensus 205 ---~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 205 ---PLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred ---CCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 1123344555678877776442 33478889988888999999887754
No 87
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=1.2e-13 Score=125.59 Aligned_cols=158 Identities=17% Similarity=0.100 Sum_probs=105.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
|+|+||||||+|+||++++++|++ +|++|++++|+.... . ....++.++.+|++|++++..+++
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALAA-----AGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ 75 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 568899999999999999999998 899999999864321 0 012367899999999987766554
Q ss_pred ----cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc---CC-----CcceEEEecCCccccccc
Q 015961 94 ----QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN---AP-----NLRHVCLQTGTKHYLGPF 153 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~---~~-----~~~~~~~~s~~~~y~ss~ 153 (397)
.+|.|+|+++...... +..++.+++|+.++.++++++.+. .. ...+++++||...+
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~---- 151 (256)
T PRK12745 76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI---- 151 (256)
T ss_pred HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc----
Confidence 4677999876532211 244667899999999998887543 11 14567777643221
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 154 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 154 ~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
++. . +... |+. +.++..+.. ...|++++++||+.+.++
T Consensus 152 --~~~--------~------~~~~--Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~ 196 (256)
T PRK12745 152 --MVS--------P------NRGE--YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD 196 (256)
T ss_pred --cCC--------C------CCcc--cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence 110 0 1112 432 333333221 246899999999999883
No 88
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.58 E-value=6.1e-14 Score=126.43 Aligned_cols=157 Identities=17% Similarity=0.093 Sum_probs=105.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
+++||||||+|+||.+++++|++ +|++|++++|++.... ....++.++.+|+.|++++..++++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAA-----DGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999998 8999999999764310 0123577889999999887776654
Q ss_pred ---CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 95 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
+|.|+|+++...... +.....++.|+.++.++++++... ..+..+++++|+... .++.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~------~~~~----- 148 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG------VTGN----- 148 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh------ccCC-----
Confidence 477999876432211 123556889999999999888542 223568887774221 1110
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
.+... |.. +.+...+. ....+++++++||+.++++
T Consensus 149 ---------~~~~~--y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~ 190 (246)
T PRK05653 149 ---------PGQTN--YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTD 190 (246)
T ss_pred ---------CCCcH--hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCc
Confidence 01111 332 33333322 1346899999999999994
No 89
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=99.58 E-value=6e-14 Score=118.36 Aligned_cols=250 Identities=12% Similarity=0.100 Sum_probs=152.1
Q ss_pred CcccccccccccccccCccCccCCCCCEEEEEcCCChhHHHHHH-----HccCCCCCCCCcEEEEEeCCCCCCCCCCCCc
Q 015961 1 MSWWWAGAIGAARKKFEEDEPARSYQSVALIVGVTGIVGNSLAE-----ILPLPDTPGGPWKVYGVARRPKPNWNADHLV 75 (397)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~-----~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v 75 (397)
|+|++...+|..|+ .++-+.+|+|+..|.. ++-+.. ...+|+|+.++|.+.+. ++
T Consensus 1 ~~w~~~~~~~~sr~--------------a~~~~~~g~i~~nl~~~~~~~H~t~~~-~a~~h~vtv~sR~pg~~-----ri 60 (315)
T KOG3019|consen 1 KVWFSFFNSGKSRD--------------AVSNWSNGIIRENLGSETSCCHDTNVH-SADNHAVTVLSRSPGKA-----RI 60 (315)
T ss_pred CccceeecCCcccc--------------CCCCccccchhccccCcccccccCCCC-cccccceEEEecCCCCc-----cc
Confidence 78988888777765 3556889999988876 333311 22469999999988653 33
Q ss_pred eEEEccCCCHHHHHHHHccCCCeeEEEEe----cccCCC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccc
Q 015961 76 EYVQCDVSDPEETQAKLSQLTDVTHIFYV----TWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY 149 (397)
Q Consensus 76 ~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~----~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y 149 (397)
.+-..|..-.. -.|+.++++++. .-...+ -.++.....+..|+.|.+++..+-...+-++.+|++.+|
T Consensus 61 tw~el~~~Gip------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y 134 (315)
T KOG3019|consen 61 TWPELDFPGIP------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVY 134 (315)
T ss_pred ccchhcCCCCc------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEe
Confidence 33333321110 012222222111 111111 234555667777888999998874445678888988888
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCcchhH--HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHH
Q 015961 150 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAV 227 (397)
Q Consensus 150 ~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~--e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i 227 (397)
.-| ....++|+.+...-+ +.+. -++-..+.......+.+++|.+.|.|.+.+....+..++
T Consensus 135 ~pS---------~s~eY~e~~~~qgfd--~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF------ 197 (315)
T KOG3019|consen 135 VPS---------ESQEYSEKIVHQGFD--ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPF------ 197 (315)
T ss_pred ccc---------cccccccccccCChH--HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhh------
Confidence 543 123345555533211 1111 122222221233489999999999995444333333333
Q ss_pred hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehHHHHHHHHHHhCCCCC
Q 015961 228 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 300 (397)
Q Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~g~~~~ 300 (397)
..+.|.| .|++.|+..++|+.|. +..+.++.+++ ...++.|-..+++.+..|+++.+.+.++.+.-
T Consensus 198 ~~g~GGP---lGsG~Q~fpWIHv~DL---~~li~~ale~~-~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~ 263 (315)
T KOG3019|consen 198 QMGAGGP---LGSGQQWFPWIHVDDL---VNLIYEALENP-SVKGVINGVAPNPVRNGEFCQQLGSALSRPSW 263 (315)
T ss_pred hhccCCc---CCCCCeeeeeeehHHH---HHHHHHHHhcC-CCCceecccCCCccchHHHHHHHHHHhCCCcc
Confidence 3344666 7888988888887776 55555555553 44568999999999999999999999998743
No 90
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.57 E-value=2.6e-13 Score=124.98 Aligned_cols=158 Identities=16% Similarity=0.090 Sum_probs=105.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
++++||||||+|+||++++++|++ +|++|++++|++... . ....++..+.+|++|.+++..+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALA-----AGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHh-----CcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 357899999999999999999998 899999999975421 0 012357789999999988877665
Q ss_pred cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
.+|.|+|+|+...... + .....+++|+.|+.++++++... .....+++++||...+. + .
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~------~------~- 144 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI------T------M- 144 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC------C------C-
Confidence 3677999987533211 1 23556899999999999986432 12245677776432111 1 0
Q ss_pred CCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 166 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
| +... |+. +.+...+. ....|++++++||+.+.++
T Consensus 145 -----~--~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 145 -----P--GIGY--YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD 186 (277)
T ss_pred -----C--Ccch--hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence 0 1112 443 33332222 1245899999999999773
No 91
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.57 E-value=3e-14 Score=130.07 Aligned_cols=159 Identities=14% Similarity=0.071 Sum_probs=104.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
.++++||||||+|+||++++++|++ +|++|++++|+.... .....++.++.+|++|++++..+++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAE-----AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3458999999999999999999998 899999999975321 0011246889999999988776654
Q ss_pred --cCCCeeEEEEecccC-------CCcHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEecCCccccccccccCCCCC
Q 015961 94 --QLTDVTHIFYVTWTN-------RSTEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~-------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
++|.|+|+++..... .++....+++|+.++.++++++... ..+. .+++++|+.. ..+|.
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~------~~~~~--- 154 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVA------GRLGY--- 154 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccc------cccCC---
Confidence 578899998753111 1134677899999999998887432 1122 4565554311 01111
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
+ .... |+. +.++..... ...+++++++||+.++|+
T Consensus 155 ---------~--~~~~--y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~ 196 (264)
T PRK12829 155 ---------P--GRTP--YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGP 196 (264)
T ss_pred ---------C--CCch--hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCCh
Confidence 0 0011 443 333333221 235899999999999994
No 92
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.55 E-value=8.4e-14 Score=126.08 Aligned_cols=215 Identities=16% Similarity=0.102 Sum_probs=128.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
++|++|||||+|+||.+++++|++ .|++|++++|..... . ....++.++.+|++|.+++..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAR-----EGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999 899999999975321 0 011356788999999988766554
Q ss_pred ---cCCCeeEEEEecccC------C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCC
Q 015961 94 ---QLTDVTHIFYVTWTN------R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~------~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
.+|.|+|+++..... . +.....+++|+.++.++++++... ..+..+++++||...| ..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~- 151 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW-------LY- 151 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc-------CC-
Confidence 467899987743210 0 134556789999999999988764 1124577776643322 10
Q ss_pred CCCCCCCCCCCCCCCCCCcchhHHHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF 237 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (397)
..+......+.+.+...+.. ...++++++++|+.+..+...... ...+.. ...+ +.+...
T Consensus 152 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~--~~~~--~~~~~~ 213 (250)
T PRK07774 152 ------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVA--DMVK--GIPLSR 213 (250)
T ss_pred ------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHH--HHHh--cCCCCC
Confidence 00100111222444433321 245799999999988763211111 111100 0111 222110
Q ss_pred cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961 238 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF 282 (397)
Q Consensus 238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~ 282 (397)
+ .+..++|..+++++.... ..|++||+.++..+
T Consensus 214 ---------~---~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~ 248 (250)
T PRK07774 214 ---------M---GTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII 248 (250)
T ss_pred ---------C---cCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence 1 123455777777665432 46789999987654
No 93
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2.4e-13 Score=123.42 Aligned_cols=158 Identities=11% Similarity=0.016 Sum_probs=102.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
++++|+||||+|+||++++++|++ +|++|+++ .|+.... .. ....+.++.+|++|.+++..+++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~-----~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~ 79 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLAN-----DGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLK 79 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHH
Confidence 357999999999999999999998 89998775 4543211 10 12357789999999998877665
Q ss_pred ----------cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccC
Q 015961 94 ----------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 94 ----------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
++|.|+|+++...... + .....+++|+.++.++++++.+.-....+++++||...+ .
T Consensus 80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~-------~ 152 (254)
T PRK12746 80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR-------L 152 (254)
T ss_pred HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc-------C
Confidence 3677888876432211 1 225567899999999999887642223467777643322 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
+ . .+ ...|+. +.+...+.. ...++++++++|+.+.++
T Consensus 153 ~-----~--------~~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 196 (254)
T PRK12746 153 G-----F--------TG--SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTD 196 (254)
T ss_pred C-----C--------CC--CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCc
Confidence 1 0 01 111442 333322221 246799999999999883
No 94
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.55 E-value=4.5e-14 Score=128.50 Aligned_cols=223 Identities=12% Similarity=0.039 Sum_probs=129.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
++++||||||+|+||.+++++|++ +|++|++++|+..... .....+.++.+|++|.+++..++.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLA-----EGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG 79 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999 8999999999754210 012357889999999988777665
Q ss_pred cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
.+|.++|+++...... ++.+..+++|+.++.++++++.... ..-.+++++||... .++.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~------ 147 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAG------RRGE------ 147 (257)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHh------CCCC------
Confidence 3577888876432111 1456678999999999999886531 11235666664210 1110
Q ss_pred CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961 165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF 237 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (397)
+ +. ..|+. +.+...+. ....|+++++++|+.|+++....... .+........ +.....
T Consensus 148 ------~--~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~--~~~~~~ 212 (257)
T PRK07067 148 ------A--LV--SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDA---LFARYENRPP--GEKKRL 212 (257)
T ss_pred ------C--CC--chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhh---hhhhccCCCH--HHHHHH
Confidence 0 11 12443 22222222 13568999999999999842111000 0000000000 000000
Q ss_pred cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961 238 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF 282 (397)
Q Consensus 238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~ 282 (397)
.+....... ..+..++|.++++++.... ..|++|++.+|..+
T Consensus 213 ~~~~~~~~~---~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~ 256 (257)
T PRK07067 213 VGEAVPLGR---MGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM 256 (257)
T ss_pred HhhcCCCCC---ccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence 111111222 3344556777777765432 35899999887554
No 95
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.54 E-value=4.6e-13 Score=123.43 Aligned_cols=157 Identities=14% Similarity=0.078 Sum_probs=102.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
++++||||||+|+||+++++.|++ +|++|++++|++... .....++.++.+|++|++++.. +.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~ 75 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAK-----KGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLV 75 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHH
Confidence 457899999999999999999998 899999999975421 0012468899999999988765 43
Q ss_pred -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961 94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK 160 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~ 160 (397)
.+|.|+|+++...... +.....+++|+.++.++++++... ..+..+++++||... .+|.
T Consensus 76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~------~~~~-- 147 (280)
T PRK06914 76 LKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG------RVGF-- 147 (280)
T ss_pred HHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc------cCCC--
Confidence 3466888876433211 134556789999998888876432 123467777764211 1221
Q ss_pred CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
.+... |+. +.++..+. ....|++++++||+.+.++
T Consensus 148 ------------~~~~~--Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 148 ------------PGLSP--YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN 189 (280)
T ss_pred ------------CCCch--hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence 01111 442 33333321 1346899999999998874
No 96
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.4e-13 Score=123.82 Aligned_cols=215 Identities=15% Similarity=0.124 Sum_probs=129.7
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
++.++|++|||||+|+||++++++|++ .|++|+++.|+..... .....+.++.+|++|.+++.++++
T Consensus 5 ~~~~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 79 (258)
T PRK09134 5 SMAAPRAALVTGAARRIGRAIALDLAA-----HGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVA 79 (258)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 345678999999999999999999998 8999988877532110 012457889999999988877665
Q ss_pred c-------CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCC--CcceEEEecCCccccccccccCC
Q 015961 94 Q-------LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAP--NLRHVCLQTGTKHYLGPFEAFGK 158 (397)
Q Consensus 94 ~-------~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~--~~~~~~~~s~~~~y~ss~~~~g~ 158 (397)
. +|.|+|+|+..... .+..+..+++|+.++.++++++..... .-.+++.+++.. .+.+
T Consensus 80 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~-------~~~~ 152 (258)
T PRK09134 80 RASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQR-------VWNL 152 (258)
T ss_pred HHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchh-------hcCC
Confidence 3 57788887643211 113466789999999999998876421 123444443211 1110
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHHhcC--CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhc
Q 015961 159 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVEKK--EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE 231 (397)
Q Consensus 159 ~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~~~--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~ 231 (397)
.|. ...|+..| +...+. ++ .++.++.++|+.+....... ...+ ....+
T Consensus 153 --------------~p~-~~~Y~~sK~a~~~~~~~la-~~~~~~i~v~~i~PG~v~t~~~~~----~~~~---~~~~~-- 207 (258)
T PRK09134 153 --------------NPD-FLSYTLSKAALWTATRTLA-QALAPRIRVNAIGPGPTLPSGRQS----PEDF---ARQHA-- 207 (258)
T ss_pred --------------CCC-chHHHHHHHHHHHHHHHHH-HHhcCCcEEEEeecccccCCcccC----hHHH---HHHHh--
Confidence 011 11255433 222222 21 23899999999887621110 1111 11011
Q ss_pred CCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCeeehH
Q 015961 232 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWK 285 (397)
Q Consensus 232 ~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~~s~~ 285 (397)
..+ .+ ...++.++|.++++++..+...|+.|++.++..++|.
T Consensus 208 ~~~---~~---------~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 208 ATP---LG---------RGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred cCC---CC---------CCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence 111 11 1134556688888877766667889999887766654
No 97
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.53 E-value=4.5e-13 Score=123.10 Aligned_cols=156 Identities=15% Similarity=0.129 Sum_probs=103.0
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+|++|||||+|+||++++++|++ +|++|++++|+.... . ....++.++.+|++|.+++.++++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAA-----AGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999998 899999999864321 0 011357788999999998877665
Q ss_pred --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.|+|+|+...... +.....+++|+.++.++++++... .....+|+++||...|.+
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~------------ 152 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ------------ 152 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC------------
Confidence 4577888876532211 133456789999999998887532 122456777775332211
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G 208 (397)
.+ .... |+. +.++..+.. ...|++++++||+.+..
T Consensus 153 ~~--------~~~~--Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t 194 (274)
T PRK07775 153 RP--------HMGA--YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLT 194 (274)
T ss_pred CC--------Ccch--HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccC
Confidence 00 1112 443 444433321 23589999999988754
No 98
>PRK06128 oxidoreductase; Provisional
Probab=99.52 E-value=1.2e-12 Score=121.95 Aligned_cols=213 Identities=13% Similarity=0.041 Sum_probs=127.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
+|+||||||+|+||++++++|++ .|++|++..|+.... . ....++.++.+|++|.+++.+++.
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~-----~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAR-----EGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHH-----cCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 48999999999999999999998 899998877653211 0 012356788999999987766654
Q ss_pred ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCC
Q 015961 94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
.+|.++|+|+...... ++....+++|+.++.++++++...-..-.+++++||...|...
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 199 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS---------- 199 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC----------
Confidence 4677888877432111 1456788999999999999987642222467777653332110
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 235 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (397)
+ . ...|+. +.+...+. ....|+++.+++|+.|.++-..........+.. .. ...|+
T Consensus 200 --~--------~--~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~---~~--~~~p~ 262 (300)
T PRK06128 200 --P--------T--LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPD---FG--SETPM 262 (300)
T ss_pred --C--------C--chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHH---Hh--cCCCC
Confidence 0 0 111443 32222222 134689999999999998421111000011100 00 01121
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCee
Q 015961 236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF 282 (397)
Q Consensus 236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~~ 282 (397)
....+.+++|..+++++.... ..|++|++.+|..+
T Consensus 263 ------------~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 263 ------------KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred ------------CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 112244556777776665432 34789999877543
No 99
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.52 E-value=2.8e-13 Score=123.38 Aligned_cols=158 Identities=9% Similarity=-0.006 Sum_probs=102.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
|+|+||||||+|+||.+++++|++ +|++|++++|+.... . .....+.++.+|++|.+++..++.
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 75 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLAE-----EGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV 75 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH
Confidence 578999999999999999999998 899999999875321 0 011357899999999987766554
Q ss_pred -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEecCCccccccccccCCC
Q 015961 94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
.+|.|+|+|+...... ++....+++|+.++.++++++.+. ..+ -.+++++||.. ..+|.
T Consensus 76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~------~~~~~- 148 (259)
T PRK12384 76 DEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS------GKVGS- 148 (259)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc------cccCC-
Confidence 3577899876433211 134566799999988877777543 112 23666665321 12221
Q ss_pred CCCCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
+ . ...|+..| ++..+. ....|+++.++||+.+++.
T Consensus 149 -----~--------~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~ 190 (259)
T PRK12384 149 -----K--------H--NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKS 190 (259)
T ss_pred -----C--------C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence 0 0 11144322 222221 1357899999999999873
No 100
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4e-13 Score=120.62 Aligned_cols=156 Identities=16% Similarity=0.079 Sum_probs=105.1
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
+|+||||||+|+||++++++|++ +|++|++++|++... .....+++++.+|+.|.+++..+++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAA-----RGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG 81 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHH-----CCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 57999999999999999999998 899999999975431 1112357788999999988776665
Q ss_pred cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
++|.|+|+++..... . +...+.+++|+.++.++++++.+. ..+..+++++||...| +. .
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----~- 148 (239)
T PRK12828 82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAAL-------KA-----G- 148 (239)
T ss_pred CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhc-------cC-----C-
Confidence 467788987642111 0 123456789999999998887542 1236788877753322 11 0
Q ss_pred CCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 166 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
+ + ...|+. +.++.... ....++++.++||+.+++
T Consensus 149 -----~--~--~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~ 189 (239)
T PRK12828 149 -----P--G--MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDT 189 (239)
T ss_pred -----C--C--cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence 0 1 111433 23333222 134689999999999998
No 101
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.50 E-value=3.6e-13 Score=126.76 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=88.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
++++||||||+|+||.+++++|++ .|++|++++|+.... . .....+.++.+|++|.+++.++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAK-----RGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 457899999999999999999998 899999999975321 1 1123578899999999988776653
Q ss_pred ----CCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCcccc
Q 015961 95 ----LTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYL 150 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ 150 (397)
+|.++|.|+..... . +..+..+++|+.|+.++++++... .....+++++||..++.
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 67788887743211 1 145667899999999988877653 11134788888766553
No 102
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.50 E-value=3.6e-13 Score=123.50 Aligned_cols=156 Identities=20% Similarity=0.186 Sum_probs=107.1
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-------CCCe
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV 98 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~~~V 98 (397)
+++|+||||||+||++++++|++ +|++|++++|++.... ...+++++++|++|++++..+++. +|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLAR-----AGYRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46899999999999999999998 8999999999764432 225788999999999988887764 5778
Q ss_pred eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961 99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 170 (397)
Q Consensus 99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~ 170 (397)
+|+|+...... ++....+++|+.|+.++++++... ..+..+++++||...+. ..
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------~~------ 139 (270)
T PRK06179 78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL------------PA------ 139 (270)
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC------------CC------
Confidence 88876532211 134677899999999988876432 12356788777532111 00
Q ss_pred CCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 171 PRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 171 p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
|. ...|+. +.+..... .+..|+++++++|+.+.++
T Consensus 140 ---~~-~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~ 181 (270)
T PRK06179 140 ---PY-MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN 181 (270)
T ss_pred ---CC-ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccc
Confidence 10 111442 32222211 1456899999999998874
No 103
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.50 E-value=5.3e-13 Score=121.28 Aligned_cols=215 Identities=15% Similarity=0.086 Sum_probs=129.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
.+|+||||||+|+||++++++|++ +|++|++++|+.... .. ...++.++.+|++|.+++..++..
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQ-----AGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 458999999999999999999998 899999999975321 00 113477899999999888777654
Q ss_pred ----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
.|.|+|+++...... +..+..+++|+.++.++++++.+. .....+++++||...+
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~------------- 150 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA------------- 150 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc-------------
Confidence 567888876432111 123556789999999999988754 1124577777642111
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 235 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (397)
.+. + . ...|+. +.+...+.. ..+|+++.++||+.+.++.-..... ...+.. .+.+ ..|+
T Consensus 151 -~~~----~--~--~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~--~~~~--~~~~ 216 (255)
T PRK07523 151 -LAR----P--G--IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSA--WLEK--RTPA 216 (255)
T ss_pred -cCC----C--C--CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHH--HHHh--cCCC
Confidence 000 0 1 112443 333333221 3568999999999998832111000 001100 0111 1121
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCCceeccCCCeee
Q 015961 236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK 283 (397)
Q Consensus 236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~--~~~g~~yni~~~~~~s 283 (397)
.......++|.++++++... ...|+++++.++...|
T Consensus 217 ------------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 217 ------------GRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred ------------CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 11224556677777776542 2347889988776544
No 104
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.49 E-value=1.3e-12 Score=119.01 Aligned_cols=156 Identities=13% Similarity=0.023 Sum_probs=99.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
++|++|||||+|+||++++++|++ +|++|++++|+.... . .....+.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAA-----EGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999998 899999999974211 0 012356788999999887766554
Q ss_pred --cCCCeeEEEEeccc--C-----CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 94 --QLTDVTHIFYVTWT--N-----RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 94 --~~~~V~h~a~~~~~--~-----~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
.+|.++|.|+.... + ..+....+++|+.++..+++++... ..+..+++++||...| +.
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~---- 150 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-------GI---- 150 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-------CC----
Confidence 45778888763211 1 1134556788998877665555432 1123567777653222 10
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
+... |+. +.+...+. ....|+++.+++|+.|+++
T Consensus 151 -----------~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 151 -----------NRVP--YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred -----------CCCc--cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 0011 443 33333222 1345899999999999984
No 105
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=3.2e-13 Score=122.37 Aligned_cols=213 Identities=11% Similarity=-0.012 Sum_probs=126.3
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
+++||||||+|+||++++++|++ +|++|++..|+..... .....+.++.+|+++.+++..+++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAK-----EGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 47999999999999999999998 8999888776432110 011245688999999987766654
Q ss_pred ---cCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
.+|.|+|+|+...... + ..+..+++|+.++.++++++.+.-....+++++||...| .+
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------ 147 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI-------RP------ 147 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc-------CC------
Confidence 4677999887532211 1 124567999999999999887652223467766643222 11
Q ss_pred CCCCCCCCCCCCCcchhH-----HHHHHHHHhcC--CCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCcee
Q 015961 165 PFTEDMPRLDAPNFYYTL-----EDILFEEVEKK--EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF 237 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (397)
..+. ..|+. +.+...+. ++ .++.+.+++|+.+.++.......... .. .+.....+.
T Consensus 148 -------~~~~--~~Y~~sK~~~~~~~~~l~-~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~-~~-----~~~~~~~~~- 210 (252)
T PRK06077 148 -------AYGL--SIYGAMKAAVINLTKYLA-LELAPKIRVNAIAPGFVKTKLGESLFKVLG-MS-----EKEFAEKFT- 210 (252)
T ss_pred -------CCCc--hHHHHHHHHHHHHHHHHH-HHHhcCCEEEEEeeCCccChHHHhhhhccc-cc-----HHHHHHhcC-
Confidence 0111 12553 33333332 22 26899999999998731100000000 00 000000000
Q ss_pred cCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCCe
Q 015961 238 PGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV 281 (397)
Q Consensus 238 ~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~~ 281 (397)
......+..++|+++++++..+...|++||+.++..
T Consensus 211 --------~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 211 --------LMGKILDPEEVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred --------cCCCCCCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence 011234455568888887766666789999998753
No 106
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.49 E-value=6.8e-13 Score=120.10 Aligned_cols=157 Identities=11% Similarity=0.071 Sum_probs=104.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+++||||||+|+||++++++|++ +|++|++++|+.... . ....++.++.+|++|.+++++++.
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAE-----EGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999 899999999875321 0 012358899999999988877665
Q ss_pred --cCCCeeEEEEecccCC---C---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.|+|+++...... . ..+..+++|+.++.++++++... ..+..+++++||...|.+. .
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~----------~ 147 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS----------S 147 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC----------C
Confidence 3677888876422111 1 23556899999999988877532 1234678877754332110 0
Q ss_pred CCCCCCCCCCCCCCcchhHHH-----HHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 164 PPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
. ...|+..| +...+.. ...+++++++||+.++++
T Consensus 148 ----------~--~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~ 188 (250)
T TIGR03206 148 ----------G--EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTA 188 (250)
T ss_pred ----------C--CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccch
Confidence 0 01144322 2222221 234799999999999984
No 107
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.49 E-value=2.6e-12 Score=116.11 Aligned_cols=164 Identities=12% Similarity=0.053 Sum_probs=102.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
|++++|||||+|+||++++++|++ +|++|+...++.... .. ...++.++.+|++|.+++.+++.
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAAE-----RGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVD 75 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 567899999999999999999998 798887776443211 00 11356789999999988877665
Q ss_pred ----cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC-----CCcceEEEecCCccccccccccC
Q 015961 94 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-----PNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-----~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
.+|.|+|+++...... ++....+++|+.++.++++++.+.- .+-.+++++||... .++
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~------~~~ 149 (248)
T PRK06123 76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAA------RLG 149 (248)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhh------cCC
Confidence 4577899876532211 1345678999999999888876531 11235666654211 222
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
. .. . .........+.+.++..+. ....+++++++||+.++++
T Consensus 150 ~----~~----~--~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~ 193 (248)
T PRK06123 150 S----PG----E--YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTE 193 (248)
T ss_pred C----CC----C--ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCc
Confidence 1 00 0 0000111122244333332 1345899999999999994
No 108
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.48 E-value=2.5e-12 Score=116.00 Aligned_cols=115 Identities=19% Similarity=0.087 Sum_probs=84.1
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
+++||||||||+||++++++|++ +|++|+++.|+.... . ....++.++.+|++|.+++.++++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAA-----QGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 37899999999999999999998 899998888865421 0 112467789999999988777665
Q ss_pred ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|+++...... +.....+++|+.++.++++++... .....+++++|+
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 4677899876432211 134556789999999999888754 122456777764
No 109
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.48 E-value=1.7e-12 Score=117.36 Aligned_cols=158 Identities=18% Similarity=0.092 Sum_probs=104.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceEEEccCCCHHHHHHHHc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
++++||||||+|+||++++++|++ +|++|++++|...... .....+.++.+|+.|.+++...++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 79 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAA-----DGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALD 79 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 457999999999999999999998 8999999877432110 012357889999999988777663
Q ss_pred -------cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEecCCccccccccccC
Q 015961 94 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 94 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
.+|.|+|+++..... . ++....+++|+.++.++++++. .. .....+++++||...+. +
T Consensus 80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~ 153 (249)
T PRK12827 80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR------G 153 (249)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC------C
Confidence 467799987643211 1 1345677999999999999987 21 12356777776533221 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
. .+ ...|+. +.+...+. ....+++++++||+.+.++
T Consensus 154 ~--------------~~--~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~ 196 (249)
T PRK12827 154 N--------------RG--QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTP 196 (249)
T ss_pred C--------------CC--CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCC
Confidence 0 01 111443 22222221 1335899999999999983
No 110
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.48 E-value=1e-12 Score=118.92 Aligned_cols=212 Identities=11% Similarity=0.014 Sum_probs=125.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
++++|||||+|+||++++++|++ .|++|+++ .|+.... . ....++.++.+|++|++++..+++.
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAE-----EGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE 78 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999 89998764 5654221 0 0123578899999999988776653
Q ss_pred ----CCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ----LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.|+|.++...... + .....+++|+.++.++++++.... .+..+|+++||...+. +
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------~----- 147 (250)
T PRK08063 79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR------Y----- 147 (250)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc------C-----
Confidence 577888876432111 1 223457899999999998887541 2345788777532110 0
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 235 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (397)
..+.. .|+. +.++..+.. ...++++++++|+.+..+........ ..+ ...... ..+
T Consensus 148 ---------~~~~~--~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~--~~~~~~--~~~- 210 (250)
T PRK08063 148 ---------LENYT--TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-EEL--LEDARA--KTP- 210 (250)
T ss_pred ---------CCCcc--HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-hHH--HHHHhc--CCC-
Confidence 00111 1443 344333221 24689999999999987321111100 001 000000 111
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCCceeccCCCe
Q 015961 236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV 281 (397)
Q Consensus 236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~--~~g~~yni~~~~~ 281 (397)
.....+..++|+.+++++..+. ..|+.+++.++..
T Consensus 211 -----------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 211 -----------AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred -----------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 0123445666888877765433 3478888877654
No 111
>PRK09186 flagellin modification protein A; Provisional
Probab=99.48 E-value=6.5e-13 Score=120.70 Aligned_cols=166 Identities=13% Similarity=0.075 Sum_probs=103.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHcc-
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~~- 94 (397)
.+|+||||||+|+||.+++++|++ +|++|++++|++... ......+.++.+|++|++++.+++..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~-----~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILE-----AGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKS 77 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHH
Confidence 358999999999999999999998 899999999875431 01123466789999999888777654
Q ss_pred ------CCCeeEEEEeccc-------CC--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961 95 ------LTDVTHIFYVTWT-------NR--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 95 ------~~~V~h~a~~~~~-------~~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
+|.|+|+|+.... .. +.....+++|+.++..+++++... ..+..+++++||...+. +
T Consensus 78 ~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~ 151 (256)
T PRK09186 78 AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV------A 151 (256)
T ss_pred HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc------c
Confidence 6778888753211 01 124556788888877666655432 11245778777533221 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhHHH-----HHH---HHHhcCCCeeEEEEcCCceee
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTLED-----ILF---EEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~e~-----~l~---~~~~~~~g~~~~ilRp~~v~G 208 (397)
+ .....+..+..... .|+..| +.. ... ...++++++++|+.+++
T Consensus 152 ~----~~~~~~~~~~~~~~--~Y~~sK~a~~~l~~~la~e~-~~~~i~v~~i~Pg~~~~ 203 (256)
T PRK09186 152 P----KFEIYEGTSMTSPV--EYAAIKAGIIHLTKYLAKYF-KDSNIRVNCVSPGGILD 203 (256)
T ss_pred c----cchhccccccCCcc--hhHHHHHHHHHHHHHHHHHh-CcCCeEEEEEecccccC
Confidence 1 11112222221111 255332 222 221 35679999999998876
No 112
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.48 E-value=1.1e-12 Score=118.60 Aligned_cols=208 Identities=19% Similarity=0.142 Sum_probs=124.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
++++|||||+|+||++++++|++ +|++|+++.++.... . ....++.++.+|++|++++.++++.
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQ-----EGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999998 899998776543211 0 0113578899999999988777665
Q ss_pred ----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.|+|+++...... ....+.+++|+.++.++++++... .....+++++||...+ ++.
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~~---- 150 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ------AGG---- 150 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc------CCC----
Confidence 577889876532211 245667899999999999988653 1123467766642211 110
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCc
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 235 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (397)
.+... |+. +.+...... ...++++++++|+.+.++.... ...... ..... +.+
T Consensus 151 ----------~~~~~--Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~--~~~~~--~~~- 210 (247)
T PRK12935 151 ----------FGQTN--YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE---VPEEVR--QKIVA--KIP- 210 (247)
T ss_pred ----------CCCcc--hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh---ccHHHH--HHHHH--hCC-
Confidence 01112 443 222222210 2358999999999987631111 000010 00011 111
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCCC-CCCCceeccCC
Q 015961 236 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNG 279 (397)
Q Consensus 236 ~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~-~~g~~yni~~~ 279 (397)
...+. +..++++++++++.... ..|++||+.++
T Consensus 211 --------~~~~~---~~edva~~~~~~~~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 211 --------KKRFG---QADEIAKGVVYLCRDGAYITGQQLNINGG 244 (247)
T ss_pred --------CCCCc---CHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence 01222 44555777777764422 46789999876
No 113
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.1e-12 Score=118.85 Aligned_cols=158 Identities=14% Similarity=0.039 Sum_probs=103.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
.+|++|||||+|+||++|+++|++ +|++|+++.|+.... .....++.++.+|++|++++.++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAR-----EGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-----CCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999975321 1012357889999999998877665
Q ss_pred --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.|+|+++...... +.....+++|+.++.++.+++... .....+++++||... .+|.
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~------~~~~----- 147 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA------LAGG----- 147 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhh------ccCC-----
Confidence 4677889877432111 134556889999997776665432 112467777764321 1121
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
.. ...|+. +.++..+.. ...+++++++||+.++++
T Consensus 148 ---------~~--~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (252)
T PRK06138 148 ---------RG--RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTP 189 (252)
T ss_pred ---------CC--ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCc
Confidence 00 111442 333333221 345899999999999884
No 114
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.46 E-value=7.6e-13 Score=120.31 Aligned_cols=116 Identities=11% Similarity=0.011 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceEEEccCCCHHHHHHHHc-cCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS-QLT 96 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~-~~~ 96 (397)
|+++||||||||+||++++++|++ .|++|++++|++... .....++.++.+|++|++++..++. ++|
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id 75 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLAR-----KGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVD 75 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence 567999999999999999999998 899999999975321 0012357899999999999988876 688
Q ss_pred CeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 97 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 97 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.|+|+|+...... +.....+++|+.++.++.+++... ..+..+++++||
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS 132 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSS 132 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcC
Confidence 8999876432111 123456788999877666544321 112467887774
No 115
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.46 E-value=5e-12 Score=113.22 Aligned_cols=152 Identities=17% Similarity=0.178 Sum_probs=101.9
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc------cCCCee
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS------QLTDVT 99 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~------~~~~V~ 99 (397)
+|+||||||+|+||.+++++|++ +|++|+++.|++.... ..+++.+|++|.+++..++. ++|.|+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLAN-----LGHQVIGIARSAIDDF----PGELFACDLADIEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCccccc----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEE
Confidence 47899999999999999999998 8999999999865422 23678999999988776665 467799
Q ss_pred EEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961 100 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171 (397)
Q Consensus 100 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p 171 (397)
|+++...... ++....+++|+.++.++.+++... ..+..+++++||...| +. +
T Consensus 74 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------~------ 134 (234)
T PRK07577 74 NNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF-------GA------L------ 134 (234)
T ss_pred ECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc-------CC------C------
Confidence 9876532211 134556789999988877666432 1124577777753322 21 0
Q ss_pred CCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 172 RLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 172 ~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
.... |+. +.+...+. ....|++++++||+.+..+
T Consensus 135 --~~~~--Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 135 --DRTS--YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETE 175 (234)
T ss_pred --CchH--HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCc
Confidence 0012 443 22222211 1346899999999998873
No 116
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.46 E-value=5.2e-13 Score=121.47 Aligned_cols=158 Identities=13% Similarity=0.059 Sum_probs=105.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
++|+||||||+|+||++++++|++ +|++|++++|++... . ....++.++.+|++|.+++..++.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAAR-----AGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999975321 0 012357889999999988766554
Q ss_pred ---cCCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
.+|.|+|+|+..... . +.....+++|+.++..+++++... .....+++++||...+ .
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~-------~----- 146 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR-------H----- 146 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc-------c-----
Confidence 457789987642211 1 144667899999999999988753 1112467776642211 1
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
+ ..+... |+. +.++..+.. ...++++.++||+.++++
T Consensus 147 --~------~~~~~~--Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~ 190 (258)
T PRK07890 147 --S------QPKYGA--YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGD 190 (258)
T ss_pred --C------CCCcch--hHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcH
Confidence 0 001111 442 333333221 345799999999999994
No 117
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.45 E-value=8.6e-13 Score=120.06 Aligned_cols=157 Identities=15% Similarity=0.016 Sum_probs=102.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
|+++||||||+|+||.+++++|++ +|++|++++|+.... .....++.++.+|++|++++.++++.
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 75 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYAR-----QGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA 75 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh
Confidence 457999999999999999999998 899999999875321 11112678999999999888776543
Q ss_pred ---CCCeeEEEEecccC---C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ---LTDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.++|.++..... . +.....+++|+.|+.++++++... ..+..+++.+||...+ ++.
T Consensus 76 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~------~~~---- 145 (257)
T PRK07024 76 HGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV------RGL---- 145 (257)
T ss_pred CCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc------CCC----
Confidence 57788887643211 1 134667899999998877744221 1123567766642211 110
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
|. ...|+. +.+...+. .+..|++++++||+.|.+
T Consensus 146 -----------~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 186 (257)
T PRK07024 146 -----------PG-AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRT 186 (257)
T ss_pred -----------CC-CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcC
Confidence 10 112543 22222211 145689999999999987
No 118
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.45 E-value=1.6e-12 Score=117.75 Aligned_cols=116 Identities=17% Similarity=0.111 Sum_probs=84.2
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~----- 94 (397)
+++||||||+|+||.+++++|++ +|++|++++|++... .....++.++.+|++|++++..+++.
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAA-----EGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 47899999999999999999998 899999999986421 00113477999999999988777653
Q ss_pred --CCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCC
Q 015961 95 --LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT 146 (397)
Q Consensus 95 --~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~ 146 (397)
+|.|+|+++...... +.....+++|+.++.++++.+... ..+..+|+++||.
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 142 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAST 142 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCh
Confidence 577888876422111 134567899999987777766543 1235677777653
No 119
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.45 E-value=6.9e-13 Score=122.09 Aligned_cols=156 Identities=17% Similarity=0.150 Sum_probs=102.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHcc--------
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ-------- 94 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~-------- 94 (397)
.|+++||||||+|+||.+++++|.+ +|++|++++|++... .....+++++.+|++|.+++..+++.
T Consensus 2 ~~~k~vlItGasggiG~~la~~l~~-----~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 2 DMKRSILITGCSSGIGAYCARALQS-----DGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999999999999999999998 899999999976431 01123678899999999877666543
Q ss_pred CCCeeEEEEecccCC--C----cHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 95 LTDVTHIFYVTWTNR--S----TEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 95 ~~~V~h~a~~~~~~~--~----~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
+|.++|+|+...... + .....+++|+.| ++++++.+++.+ ..+++++||.. |..
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS~~---------~~~----- 140 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSSIL---------GLV----- 140 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECChh---------hcC-----
Confidence 466888765432211 1 235578999999 566666666543 45788776522 210
Q ss_pred CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
+ ... ...|+. +.+...+. .+..|+++++++|+.|-.
T Consensus 141 ~------~~~--~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T 183 (277)
T PRK05993 141 P------MKY--RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIET 183 (277)
T ss_pred C------CCc--cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccC
Confidence 0 001 112553 22222211 145789999999998865
No 120
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.1e-12 Score=116.48 Aligned_cols=158 Identities=15% Similarity=0.093 Sum_probs=105.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHcc---CCCee
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVT 99 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~ 99 (397)
.+++++||||+|+||+++++.|++ +|++|++++|+.... .....+..++.+|++|.+++..+++. +|.|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQ-----RGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 357999999999999999999998 899999999975321 10112467889999999888777764 67788
Q ss_pred EEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961 100 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 170 (397)
Q Consensus 100 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~ 170 (397)
|+++...... .+....+++|+.++.++++++.+.. ....+++++||...|. +. .
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~----~------- 145 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV------GL----P------- 145 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC------CC----C-------
Confidence 8876532211 1345567899999999999887541 1125677776433221 10 0
Q ss_pred CCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 171 PRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 171 p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
. ...|+. +.+...+.. ...+++++.+||+.++++
T Consensus 146 ---~--~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~ 186 (245)
T PRK07060 146 ---D--HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTP 186 (245)
T ss_pred ---C--CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCc
Confidence 0 111442 443333321 245799999999999984
No 121
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.1e-12 Score=114.99 Aligned_cols=112 Identities=21% Similarity=0.139 Sum_probs=80.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHcc---CCCe
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQ---LTDV 98 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V 98 (397)
|+|+||||||+|+||++++++|++ + ++|++++|++... . ...++++++++|++|.+++.+++.. +|.|
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~-----~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 75 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAP-----T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVL 75 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHh-----h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence 357899999999999999999998 7 8999999975331 0 0113678999999999999888874 6779
Q ss_pred eEEEEecccCC------CcHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecC
Q 015961 99 THIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 99 ~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
+|+++...... ......+++|+.+ ++++++++++. ..+++++||
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss 129 (227)
T PRK08219 76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINS 129 (227)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcc
Confidence 99876532111 1234557888888 45555555543 356676664
No 122
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.43 E-value=4.6e-12 Score=104.00 Aligned_cols=206 Identities=17% Similarity=0.143 Sum_probs=126.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 106 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~ 106 (397)
+||.|.||||-+|++++++.++ +||+|++++|++.+.. ..+++.+++.|+.|++.+.+.+.++|.|+...+...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~-----RGHeVTAivRn~~K~~-~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~ 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALK-----RGHEVTAIVRNASKLA-ARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHh-----CCCeeEEEEeChHhcc-ccccceeecccccChhhhHhhhcCCceEEEeccCCC
Confidence 4799999999999999999999 8999999999876532 126788999999999999999999998887654321
Q ss_pred cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh----H
Q 015961 107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT----L 182 (397)
Q Consensus 107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~----~ 182 (397)
.+.+.. .....+.|++.++.++ +.+++.+.++. | .|-. +...-.+.|..|. -||. +
T Consensus 75 ---~~~~~~---~~k~~~~li~~l~~ag--v~RllVVGGAG----S--L~id----~g~rLvD~p~fP~--ey~~~A~~~ 134 (211)
T COG2910 75 ---SDNDEL---HSKSIEALIEALKGAG--VPRLLVVGGAG----S--LEID----EGTRLVDTPDFPA--EYKPEALAQ 134 (211)
T ss_pred ---CChhHH---HHHHHHHHHHHHhhcC--CeeEEEEcCcc----c--eEEc----CCceeecCCCCch--hHHHHHHHH
Confidence 222222 2233566777777653 66666665421 1 1110 1111223343332 2343 2
Q ss_pred HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 015961 183 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW 262 (397)
Q Consensus 183 e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~ 262 (397)
.+.|...- .+..++||.+-|+..+-|++... ++ .+ .+..+..-..+.. .+...| .|.+++.
T Consensus 135 ae~L~~Lr-~~~~l~WTfvSPaa~f~PGerTg-~y--rl---------ggD~ll~n~~G~S---rIS~aD---YAiA~lD 195 (211)
T COG2910 135 AEFLDSLR-AEKSLDWTFVSPAAFFEPGERTG-NY--RL---------GGDQLLVNAKGES---RISYAD---YAIAVLD 195 (211)
T ss_pred HHHHHHHh-hccCcceEEeCcHHhcCCccccC-ce--Ee---------ccceEEEcCCCce---eeeHHH---HHHHHHH
Confidence 44454443 45569999999999999533221 11 00 1222233223332 233333 3666666
Q ss_pred HhcCCCCCCCceecc
Q 015961 263 AAVDPYAKNEAFNCN 277 (397)
Q Consensus 263 ~~~~~~~~g~~yni~ 277 (397)
-.+++....+.|-+.
T Consensus 196 e~E~~~h~rqRftv~ 210 (211)
T COG2910 196 ELEKPQHIRQRFTVA 210 (211)
T ss_pred HHhcccccceeeeec
Confidence 666766666666543
No 123
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.43 E-value=4e-12 Score=115.22 Aligned_cols=155 Identities=15% Similarity=0.077 Sum_probs=104.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-------CCCe
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV 98 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~~~V 98 (397)
+|++|||||+|+||++++++|++ +|++|++++|+.... ....+.++++|++|.+++.++++. +|.|
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~-----~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVE-----AGAKVIGFDQAFLTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecchhhh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47899999999999999999998 899999999976221 124678899999999888777654 6778
Q ss_pred eEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCC
Q 015961 99 THIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 170 (397)
Q Consensus 99 ~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~ 170 (397)
+|+++..... .++....+++|+.++.++++++... .....+++++|+.... .+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~--------------~~----- 141 (252)
T PRK08220 81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH--------------VP----- 141 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc--------------cC-----
Confidence 8887643211 1145667899999999999987543 1123467766642111 00
Q ss_pred CCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 171 PRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 171 p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
..+. ..|+. +.+...+. ....++++.+++|+.++++
T Consensus 142 -~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~ 184 (252)
T PRK08220 142 -RIGM--AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTD 184 (252)
T ss_pred -CCCC--chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcch
Confidence 0011 11442 33332222 0246899999999999984
No 124
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.43 E-value=1.7e-12 Score=121.23 Aligned_cols=124 Identities=14% Similarity=0.052 Sum_probs=88.6
Q ss_pred CccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHH
Q 015961 17 EEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEE 87 (397)
Q Consensus 17 ~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~ 87 (397)
+..+.++.++|+||||||+|+||++++++|++ .|++|++++|+.... . .....+.++.+|+.|.++
T Consensus 7 ~~~~~~~~~~k~vlItGas~gIG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 81 (306)
T PRK06197 7 TAADIPDQSGRVAVVTGANTGLGYETAAALAA-----KGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLAS 81 (306)
T ss_pred CccccccCCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHH
Confidence 33345666778999999999999999999998 899999999974321 0 012357889999999988
Q ss_pred HHHHHc-------cCCCeeEEEEecccCC----CcHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecCCc
Q 015961 88 TQAKLS-------QLTDVTHIFYVTWTNR----STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTK 147 (397)
Q Consensus 88 l~~~~~-------~~~~V~h~a~~~~~~~----~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~ 147 (397)
+..++. .+|.|+|+|+...... +..+..+++|+.| ++.+++.+++.+ ..+++++||..
T Consensus 82 v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~ 154 (306)
T PRK06197 82 VRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGG 154 (306)
T ss_pred HHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHH
Confidence 776654 3677888877533221 2345678999999 566666665432 35778777654
No 125
>PRK06196 oxidoreductase; Provisional
Probab=99.43 E-value=1.5e-12 Score=122.11 Aligned_cols=169 Identities=17% Similarity=0.015 Sum_probs=105.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------Q 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~-------~ 94 (397)
++|+||||||||+||.+++++|++ .|++|++++|+..... ....++.++.+|++|.+++++++. .
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~-----~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQ-----AGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999998 8999999999754210 011247899999999988776653 4
Q ss_pred CCCeeEEEEecccCC----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCC
Q 015961 95 LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE 168 (397)
Q Consensus 95 ~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E 168 (397)
+|.++|.|+...... +..+..+++|+.++.++++++... .....+++++||...+. +.... .. ...
T Consensus 100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~------~~~~~-~~-~~~ 171 (315)
T PRK06196 100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRR------SPIRW-DD-PHF 171 (315)
T ss_pred CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhcc------CCCCc-cc-cCc
Confidence 677888876432211 134667899999976665544322 11235777777543221 11000 00 000
Q ss_pred CCCCCCCCCcchhHHHHH--------HHHHhcCCCeeEEEEcCCceeec
Q 015961 169 DMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 169 ~~p~~~~~~~~y~~e~~l--------~~~~~~~~g~~~~ilRp~~v~G~ 209 (397)
..+..+ ...|+..|.. +... ...|+++++++|+.|.++
T Consensus 172 ~~~~~~--~~~Y~~SK~a~~~~~~~la~~~-~~~gi~v~~v~PG~v~t~ 217 (315)
T PRK06196 172 TRGYDK--WLAYGQSKTANALFAVHLDKLG-KDQGVRAFSVHPGGILTP 217 (315)
T ss_pred cCCCCh--HHHHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeCCcccCC
Confidence 111111 1236643332 2222 456899999999999884
No 126
>PRK06194 hypothetical protein; Provisional
Probab=99.42 E-value=3.3e-12 Score=118.15 Aligned_cols=115 Identities=18% Similarity=0.011 Sum_probs=82.9
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
+++||||||+|+||++++++|++ +|++|++++|+.... .. ...++.++.+|++|.+++.++++.
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAA-----LGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999998 899999999864321 00 123567799999999988777764
Q ss_pred ---CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHc----ccCC----CcceEEEecC
Q 015961 95 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVI----PNAP----NLRHVCLQTG 145 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~----~~~~----~~~~~~~~s~ 145 (397)
+|.|+|+|+...... ++....+++|+.|+.++++++. +... ...+++++||
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS 148 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTAS 148 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCC
Confidence 688999987643211 1345568899999999776643 2221 1246777664
No 127
>PRK06182 short chain dehydrogenase; Validated
Probab=99.42 E-value=1.3e-12 Score=119.95 Aligned_cols=154 Identities=19% Similarity=0.112 Sum_probs=102.1
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTD 97 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~ 97 (397)
+++|+||||+|+||++++++|++ +|++|++++|+..... ....+++++.+|++|.+++..+++ ++|.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAA-----QGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 47899999999999999999998 8999999999754210 011358899999999998877775 5677
Q ss_pred eeEEEEecccCC------CcHHHHHHhHHHHHH----HHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961 98 VTHIFYVTWTNR------STEAENCKINGSMFR----NVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 167 (397)
Q Consensus 98 V~h~a~~~~~~~------~~~~~~~~~nv~gt~----~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~ 167 (397)
++|+|+...... ++.+..+++|+.++. .++..+++.+ ..+++++||...+ . ..
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~~~-----~-------~~--- 140 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISSMGGK-----I-------YT--- 140 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcchhhc-----C-------CC---
Confidence 888876532211 145667889998854 4445555432 4577777642111 0 00
Q ss_pred CCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeec
Q 015961 168 EDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 168 E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~ 209 (397)
+.. ..|+..|. ++... ...|++++++||+.+..+
T Consensus 141 ------~~~-~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~ 182 (273)
T PRK06182 141 ------PLG-AWYHATKFALEGFSDALRLEV-APFGIDVVVIEPGGIKTE 182 (273)
T ss_pred ------CCc-cHhHHHHHHHHHHHHHHHHHh-cccCCEEEEEecCCcccc
Confidence 111 11443222 22222 456899999999999873
No 128
>PRK08264 short chain dehydrogenase; Validated
Probab=99.42 E-value=3.8e-12 Score=114.34 Aligned_cols=157 Identities=18% Similarity=0.073 Sum_probs=105.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc---CCCeeE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH 100 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~h 100 (397)
++++||||||+|+||++++++|++ .|+ +|++++|++........++.++.+|+.|.+++.++++. +|.|+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLA-----RGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 347899999999999999999998 898 89999997654221224688999999999988887764 567888
Q ss_pred EEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961 101 IFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171 (397)
Q Consensus 101 ~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p 171 (397)
.++..... . ++....+++|+.++.++++++... .....+++++||...+.. .
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~------------~------- 140 (238)
T PRK08264 80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN------------F------- 140 (238)
T ss_pred CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC------------C-------
Confidence 87642211 1 134567889999999999987643 112456776664322210 0
Q ss_pred CCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 172 RLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 172 ~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
+ ....|+. +.+...+. ....+++++++||+.+.+
T Consensus 141 --~-~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t 181 (238)
T PRK08264 141 --P-NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDT 181 (238)
T ss_pred --C-CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccc
Confidence 0 0112443 33332221 134589999999998876
No 129
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.41 E-value=1.1e-11 Score=111.86 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
.|+++||||||||+||.+++++|++ .|++|+++ +|++... . ....++.++.+|++|++++.+++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAK-----EGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQI 77 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3567999999999999999999998 89999988 8865321 0 012357889999999998877665
Q ss_pred -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|.++...... +..+..+++|+.++.++++++... ..+..+++++||
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 142 (247)
T PRK05565 78 VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS 142 (247)
T ss_pred HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 5788999876532111 134567889999988888877653 122456777764
No 130
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.41 E-value=1.7e-11 Score=113.48 Aligned_cols=157 Identities=14% Similarity=0.123 Sum_probs=104.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
+|+||||||+|+||.+++++|++ .|++|++++|+.... . ....++.++.+|++|.+.+.++++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~-----~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAK-----EGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 57899999999999999999998 899999999875321 0 011357789999999988777664
Q ss_pred ---cCCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.|+|+|+...... +.....+++|+.++.++++++...-....+++++||...|...
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~----------- 189 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN----------- 189 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC-----------
Confidence 4677889877532211 1335678999999999999987641112467777654333110
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
+ . ... |+. +.+...+.. ...|++++.++|+.++.+
T Consensus 190 -~------~--~~~--Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~ 231 (290)
T PRK06701 190 -E------T--LID--YSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTP 231 (290)
T ss_pred -C------C--cch--hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCc
Confidence 0 0 011 432 222222221 235899999999999873
No 131
>PLN02253 xanthoxin dehydrogenase
Probab=99.41 E-value=8.2e-12 Score=115.10 Aligned_cols=158 Identities=15% Similarity=0.066 Sum_probs=104.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
++|++|||||+|+||++++++|++ .|++|++++|+.... .....++.++++|++|.+++.+++.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHK-----HGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 457899999999999999999998 899999999864321 1112367899999999988877665
Q ss_pred --cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCC
Q 015961 94 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
.+|.++|+|+...... ++....+++|+.++.++++++.... ..-.++++++|.. ..++.
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~------~~~~~--- 162 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA------SAIGG--- 162 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh------hcccC---
Confidence 5788999887532110 1356678999999999988776431 1123455554311 11221
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
+. ...|+. +.+...+.. ...++++..++|+.+..+
T Consensus 163 ------------~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 163 ------------LG-PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred ------------CC-CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 00 011443 333333221 245799999999998773
No 132
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.40 E-value=1.1e-11 Score=111.79 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=102.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
|.|+||||||+|+||++++++|.+ +|++|++++|+.... . ....++.++.+|++|.+++.++++.
T Consensus 1 ~~k~vlItG~s~~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (245)
T PRK12824 1 MKKIALVTGAKRGIGSAIARELLN-----DGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIE 75 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 457899999999999999999998 799999999874211 0 0123578999999999887776643
Q ss_pred -----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCC
Q 015961 95 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 95 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
+|.++|+++..... .+..+..+++|+.++.++.+++.+. .....+++++||...+..
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---------- 145 (245)
T PRK12824 76 EEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG---------- 145 (245)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC----------
Confidence 56688876542211 1134567789999988886655321 123567887774322210
Q ss_pred CCCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
. + ..+. |...| +...+. ....++++++++|+.+.++
T Consensus 146 --~------~--~~~~--Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 188 (245)
T PRK12824 146 --Q------F--GQTN--YSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATP 188 (245)
T ss_pred --C------C--CChH--HHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCc
Confidence 0 0 0111 54333 222221 1345799999999999873
No 133
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.40 E-value=7.4e-12 Score=115.07 Aligned_cols=156 Identities=15% Similarity=0.005 Sum_probs=103.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
++|++|||||+|+||++++++|++ +|++|++++|+.... .. ...++.++.+|++|.+++.+++..
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~-----~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFAR-----RGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999998 899999999875321 00 112467889999999988776653
Q ss_pred ----CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961 95 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
+|.++|.|+..... . +.....+++|+.++.++++++... ...-.+++++||...+ .+
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~-------~~--- 149 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL-------VP--- 149 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc-------cC---
Confidence 57788887653211 1 134556799999999998887532 1113567777643222 10
Q ss_pred CCCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961 162 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
. .+ ...|+..|. +.... ...|+++++++|+.+.+
T Consensus 150 --~--------~~--~~~Y~asK~a~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t 191 (275)
T PRK05876 150 --N--------AG--LGAYGVAKYGVVGLAETLAREV-TADGIGVSVLCPMVVET 191 (275)
T ss_pred --C--------CC--CchHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEEeCcccc
Confidence 0 01 112553332 22222 34689999999999877
No 134
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.40 E-value=4e-12 Score=114.43 Aligned_cols=155 Identities=17% Similarity=0.085 Sum_probs=101.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHccC----CCee
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQL----TDVT 99 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~V~ 99 (397)
++||||||||+||.+++++|++ +|++|++++|++... . ....++.++.+|++|.+++.+++..+ |.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAK-----QGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 6899999999999999999998 899999999975321 0 01235788999999999998888764 4466
Q ss_pred EEEEeccc-CC---C--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCC
Q 015961 100 HIFYVTWT-NR---S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL 173 (397)
Q Consensus 100 h~a~~~~~-~~---~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~ 173 (397)
|.++.... .. + ..+..+++|+.++.++++++...-.+-.+++.+||.. ..++.
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~------~~~~~--------------- 135 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA------SELAL--------------- 135 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh------hccCC---------------
Confidence 66543211 11 1 2356789999999999998876411224556555321 01110
Q ss_pred CCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 174 DAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 174 ~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
+. ...|+.. .+...+. ....|++++++||+.|++
T Consensus 136 ~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t 176 (240)
T PRK06101 136 PR-AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVAT 176 (240)
T ss_pred CC-CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCC
Confidence 00 1124432 2222111 145689999999999988
No 135
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.40 E-value=4.8e-12 Score=113.79 Aligned_cols=156 Identities=19% Similarity=0.106 Sum_probs=104.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+++||||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|+++++++.++++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAK-----EGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999998 899999999975321 0 012367889999999998877765
Q ss_pred --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.|+|+++...... ++..+.+++|+.++.++++++... .....+++++|+...+ ++.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~------~~~----- 150 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ------KGA----- 150 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc------cCC-----
Confidence 5778999887533211 133567899999999998887643 1234567766642211 110
Q ss_pred CCCCCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 164 PPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
.+ ...|+.. .++..+. ....|++++++||+.+..
T Consensus 151 ---------~~--~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t 191 (239)
T PRK07666 151 ---------AV--TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVAT 191 (239)
T ss_pred ---------CC--CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccC
Confidence 00 1114432 2222211 134689999999999887
No 136
>PRK12743 oxidoreductase; Provisional
Probab=99.39 E-value=2.2e-11 Score=110.73 Aligned_cols=158 Identities=12% Similarity=0.005 Sum_probs=102.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
|+|+||||||+|+||.+++++|++ .|++|+++.|+..... ....++.++.+|++|.+++..++.
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQ-----QGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLI 75 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 568999999999999999999999 8999988876543210 012357889999999987766554
Q ss_pred ----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCCC
Q 015961 94 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK 160 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~ 160 (397)
.+|.|+|+++...... +.....+++|+.++.++++++.... .+-.+++++||.. +
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~---------~--- 143 (256)
T PRK12743 76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH---------E--- 143 (256)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc---------c---
Confidence 3577888766422110 1345678999999999998876531 1124677665321 1
Q ss_pred CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
.. +..+... |+. +.++.... ....+++++.++|+.+..+
T Consensus 144 --~~------~~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~ 189 (256)
T PRK12743 144 --HT------PLPGASA--YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATP 189 (256)
T ss_pred --cC------CCCCcch--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence 01 1111112 443 33332222 1346799999999999984
No 137
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.39 E-value=2e-11 Score=110.14 Aligned_cols=162 Identities=15% Similarity=0.123 Sum_probs=98.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc----
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
++||||||+|+||++++++|++ .|++|+++. |+.... .. ...++.++++|+.|++++..+++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~ 76 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQ-----EGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQH 76 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 5899999999999999999998 899988754 443211 00 113577899999999988777664
Q ss_pred ---CCCeeEEEEecccCCC-------cHHHHHHhHHHHHHHHHHHHccc-----CCCcceEEEecCCccccccccccCCC
Q 015961 95 ---LTDVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIPN-----APNLRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
+|.|+|.++....... +....+++|+.++.++++++... ..+-.+|+++||...+ ++.
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~------~~~- 149 (247)
T PRK09730 77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR------LGA- 149 (247)
T ss_pred CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------cCC-
Confidence 4568888764322111 23467899999998777765432 1123457777643221 111
Q ss_pred CCCCCCCCCCCCCCCCCCcchhHHHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
| .+. .+......+.+.++..+. ....+++++++||+.++++
T Consensus 150 -----~-~~~---~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~ 192 (247)
T PRK09730 150 -----P-GEY---VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTE 192 (247)
T ss_pred -----C-Ccc---cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCc
Confidence 0 000 010011112233333221 0346899999999999995
No 138
>PRK08324 short chain dehydrogenase; Validated
Probab=99.39 E-value=9e-12 Score=128.46 Aligned_cols=221 Identities=14% Similarity=0.100 Sum_probs=130.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
..+++||||||+|+||+++++.|++ .|++|++++|+.... .....++.++.+|++|.+++.++++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~-----~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAA-----EGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3568999999999999999999998 899999999975321 1011367889999999988776664
Q ss_pred ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEecCCccccccccccCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
++|.|+|+|+...... ......+++|+.|+.++++++.+. .... .+++++||...+ ++
T Consensus 495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~------~~---- 564 (681)
T PRK08324 495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV------NP---- 564 (681)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc------CC----
Confidence 4677899876432211 134567899999999998877543 1112 467766642211 11
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCcee-eccCCCcchhHHHHHHHHHHhhhcCC
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF-GFSPYSLMNLVGALCVYAAVCKHEGI 233 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~i~~~~~~ 233 (397)
. + ....|+. +.++..+.. ...|+++.+++|+.|| +..... ...... . ....+.
T Consensus 565 --~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~--~~~~~~-~----~~~~g~ 625 (681)
T PRK08324 565 --G---------P-NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT--GEWIEA-R----AAAYGL 625 (681)
T ss_pred --C---------C-CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc--chhhhh-h----hhhccC
Confidence 0 0 0112553 333333321 3457999999999998 532111 100000 0 000111
Q ss_pred Cc----eecCCccccceeeecccHHHHHHHHHHHhc--CCCCCCCceeccCCCe
Q 015961 234 PL----RFPGTKAAWECYSIASDADLIAEHQIWAAV--DPYAKNEAFNCNNGDV 281 (397)
Q Consensus 234 ~~----~~~g~~~~~~~~~~~~da~~la~~~~~~~~--~~~~~g~~yni~~~~~ 281 (397)
+. .+.+.+..... ...+.++|.++++++. .....|++|++.+|..
T Consensus 626 ~~~~~~~~~~~~~~l~~---~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 626 SEEELEEFYRARNLLKR---EVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred ChHHHHHHHHhcCCcCC---ccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence 10 01111222222 3344566888877763 3344578999988754
No 139
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.38 E-value=2.7e-12 Score=115.20 Aligned_cols=116 Identities=22% Similarity=0.082 Sum_probs=84.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
++++||||||+|+||++++++|++ .|++|++++|++... .....++.++.+|+.|.+++.+.++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLA-----EGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999998 799999999976321 1011467889999999988877665
Q ss_pred --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~ 145 (397)
.+|.|+|+++..... .++..+.+++|+.++.++++++.... .+..+++++|+
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISS 140 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECC
Confidence 567799987643211 11345678899999999988876431 22456777664
No 140
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.38 E-value=6.5e-12 Score=114.44 Aligned_cols=157 Identities=17% Similarity=0.097 Sum_probs=102.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH-------ccCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL-------SQLTD 97 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~-------~~~~~ 97 (397)
.+|+||||||+|+||++++++|.+ .|++|++++|+..... ..++.++++|++|.+++..++ ..+|.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLE-----AGARVVTTARSRPDDL--PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHH-----CCCEEEEEeCChhhhc--CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 458999999999999999999998 8999999999764432 246789999999998765544 34677
Q ss_pred eeEEEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961 98 VTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 167 (397)
Q Consensus 98 V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~ 167 (397)
|+|+|+..... .++....+++|+.++.++++++... .....+++++||...+ . +..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------~-------~~~ 146 (260)
T PRK06523 81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR-------L-------PLP 146 (260)
T ss_pred EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc-------C-------CCC
Confidence 88887642211 1145667889999998776655432 1123467766642211 1 100
Q ss_pred CCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 168 EDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 168 E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
+ . ...|+. +.+...+. ....|+++.+++|+.|..+
T Consensus 147 ~-----~--~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~ 188 (260)
T PRK06523 147 E-----S--TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE 188 (260)
T ss_pred C-----C--cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCc
Confidence 0 1 112443 32222222 1345799999999999883
No 141
>PRK05717 oxidoreductase; Validated
Probab=99.38 E-value=2.4e-12 Score=116.98 Aligned_cols=161 Identities=14% Similarity=0.099 Sum_probs=105.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc----
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
++..+|+||||||+|+||++++++|++ .|++|++++|+.... ......+.++.+|++|.+++..++.
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIA-----EGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 344568999999999999999999998 899999998864321 0011357789999999987755443
Q ss_pred ---cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
.+|.++|+|+...... ++....+++|+.++.++++++... ..+..+++++||...+ ++.
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~------~~~--- 151 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR------QSE--- 151 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc------CCC---
Confidence 3577999987532211 134577899999999999998643 1112456666642211 110
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHhc-CCCeeEEEEcCCceeec
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGF 209 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~g~~~~ilRp~~v~G~ 209 (397)
+ .... |+. +.+...+..+ ..++++..++|+.+.++
T Consensus 152 ---~--------~~~~--Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~ 192 (255)
T PRK05717 152 ---P--------DTEA--YAASKGGLLALTHALAISLGPEIRVNAVSPGWIDAR 192 (255)
T ss_pred ---C--------CCcc--hHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCC
Confidence 0 0011 443 3333333211 12489999999999884
No 142
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.38 E-value=4.2e-12 Score=114.81 Aligned_cols=158 Identities=15% Similarity=0.037 Sum_probs=102.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC----CCCCCceEEEccCCCHHHHHHHH-------c
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKL-------S 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~l~~~~-------~ 93 (397)
++++||||||+|+||++++++|++ +|++|++++|+..... ....++.++++|++|.+++...+ .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLA-----EGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 457999999999999999999998 8999999998743210 00135678999999987655443 3
Q ss_pred cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 167 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~ 167 (397)
.+|.|+|+++...... +.....+++|+.++.++++++...-....++++++| ....+|.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S------~~~~~~~--------- 144 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGS------INAHIGM--------- 144 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec------hHhccCC---------
Confidence 4677899876432211 144567899999999999999753111234444442 1112221
Q ss_pred CCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 168 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 168 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
+ ....|+. +.++..+.. ...|+++.++||+.++++
T Consensus 145 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 145 ------P-NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred ------C-CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence 0 0112553 333332221 345899999999999984
No 143
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.38 E-value=9.5e-12 Score=111.68 Aligned_cols=112 Identities=21% Similarity=0.140 Sum_probs=82.5
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHcc------
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ------ 94 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~~------ 94 (397)
|||||++|+||++++++|++ +|++|++++|+.... .. ....+.++.+|++|.+++.+++++
T Consensus 1 vlItG~~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAK-----EGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG 75 (239)
T ss_pred CEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 68999999999999999998 899999999875221 00 112467899999999988776654
Q ss_pred -CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 95 -LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 95 -~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
+|.|+|.++..... .+.....+++|+.++.++++++... .....+++++||
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 135 (239)
T TIGR01830 76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISS 135 (239)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 47799987753211 1245667899999999999988754 123457777764
No 144
>PRK06398 aldose dehydrogenase; Validated
Probab=99.37 E-value=1.3e-11 Score=112.41 Aligned_cols=113 Identities=13% Similarity=0.102 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLT 96 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~ 96 (397)
.++|+||||||+|.||.+++++|++ .|++|++++|+.... .++.++.+|++|++++.++++ .+|
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~-----~G~~Vi~~~r~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id 74 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKE-----EGSNVINFDIKEPSY----NDVDYFKVDVSNKEQVIKGIDYVISKYGRID 74 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCcccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3468999999999999999999998 899999999975432 368899999999988776664 467
Q ss_pred CeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 97 DVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 97 ~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.++|+|+..... .+ +....+++|+.++.++++++.+. ..+..+++++||
T Consensus 75 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 131 (258)
T PRK06398 75 ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIAS 131 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCc
Confidence 788877642211 11 34556799999999988877543 122457777765
No 145
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.37 E-value=4.9e-12 Score=115.29 Aligned_cols=114 Identities=17% Similarity=0.064 Sum_probs=83.7
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHcc-------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ------- 94 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~------- 94 (397)
|++|||||||+||++++++|++ +|++|++++|++... .....++.++.+|++|.+++.+++..
T Consensus 2 k~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAA-----EGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGG 76 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999998 899999999976421 01124688999999999887766543
Q ss_pred -CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 95 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 95 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
+|.|+|+|+...... ++.+..+++|+.++.++++++... .....+++++||
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 136 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS 136 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 477888876532111 135667899999999998887542 122456666664
No 146
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.37 E-value=8.9e-12 Score=112.36 Aligned_cols=115 Identities=16% Similarity=0.078 Sum_probs=82.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------~ 94 (397)
++++|||||+|+||+++++.|++ +|+.|++..|+.... . ....++.++.+|++|.+++.++++ .
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHA-----QGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999998 799988888764321 0 011357889999999988776543 4
Q ss_pred CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 95 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 95 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
+|.|+|+++..... .++....+++|+.++.++++++.+. .....+++++||
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 139 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITS 139 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 67788987643211 1145667899999999888876532 122457777764
No 147
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.2e-11 Score=111.86 Aligned_cols=116 Identities=16% Similarity=0.080 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
|++++|||||+|+||.+++++|++ +|++|++++|++... ......+.++++|++|.+++.++++
T Consensus 1 ~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFAA-----KGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF 75 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 467999999999999999999998 799999999975321 0012367889999999987766554
Q ss_pred -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|.|+...... ......+++|+.++.++++++... ..+..+++++||
T Consensus 76 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 140 (248)
T PRK08251 76 RDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISS 140 (248)
T ss_pred HHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 4677888776432211 133556889999999888877532 123557777764
No 148
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.36 E-value=3.1e-11 Score=108.88 Aligned_cols=116 Identities=16% Similarity=0.036 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
++++||||||+|+||++++++|++ +|++|+++.|+.... . ....++.++.+|++|.+++.++++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAA-----DGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAE 78 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 458999999999999999999999 899988887754211 0 012457889999999988877766
Q ss_pred ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
.+|.|+|+++..... .+.....+++|+.++.++++++.+....-.+++++|+
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 467788887643211 1134556789999999999888654222246666653
No 149
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.36 E-value=4e-11 Score=108.40 Aligned_cols=115 Identities=18% Similarity=0.123 Sum_probs=83.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+++||||||+|.||++++++|++ +|++|++++|++... . ....++.++.+|++|.+++.++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAE-----AGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999875421 0 011357889999999998877664
Q ss_pred --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 145 (397)
.+|.|+|+++...... ......+++|+.++.++++++.... .+..+++++||
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 4677888876432111 1345567899999999998876531 12347777764
No 150
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.36 E-value=6.9e-12 Score=114.20 Aligned_cols=161 Identities=15% Similarity=0.123 Sum_probs=105.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
++++||||||+|+||++++++|++ +|++|++++|+.... . ....++.++.+|++|+++++.+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGE-----AGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999975321 0 011357789999999988865554
Q ss_pred ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
.+|.|+|+++...... +.....+++|+.++.++++++... .....+++++||...+ ++.
T Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~------~~~--- 156 (259)
T PRK08213 86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL------GGN--- 156 (259)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc------cCC---
Confidence 3677899876432111 133556789999999999987653 1235677777753222 111
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G 208 (397)
.+ .. .+. ..|+. +.++..+.. ...|+++.+++|+.+-.
T Consensus 157 --~~---~~--~~~--~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t 201 (259)
T PRK08213 157 --PP---EV--MDT--IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPT 201 (259)
T ss_pred --Cc---cc--cCc--chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCC
Confidence 00 00 011 12553 333333321 34579999999988865
No 151
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.36 E-value=5e-12 Score=107.50 Aligned_cols=245 Identities=17% Similarity=0.157 Sum_probs=143.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEe-CCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCee
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVT 99 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~ 99 (397)
+..-+|||||+-|.+|..++..|... -|-+ |+.-+ ++++.... ..-.++..|+.|...+++..-. +|-.+
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~----yGs~~VILSDI~KPp~~V~--~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYM----YGSECVILSDIVKPPANVT--DVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHH----hCCccEehhhccCCchhhc--ccCCchhhhhhccccHHHhhcccccceee
Confidence 34458999999999999999999863 2444 55444 34433221 2335788999999888877654 33366
Q ss_pred EEEEec-ccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC-CCCCCC
Q 015961 100 HIFYVT-WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP-RLDAPN 177 (397)
Q Consensus 100 h~a~~~-~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p-~~~~~~ 177 (397)
|..+.. .+...+-....++|+.|..|+++.+.+++ ++-|+ - |+.+.||+..+ ..| +.+.. ..| .
T Consensus 116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFV-P-------STIGAFGPtSP-RNP-TPdltIQRP--R 181 (366)
T KOG2774|consen 116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK--LKVFV-P-------STIGAFGPTSP-RNP-TPDLTIQRP--R 181 (366)
T ss_pred eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC--eeEee-c-------ccccccCCCCC-CCC-CCCeeeecC--c
Confidence 653321 12233445567899999999999998874 55555 2 33346665311 011 11111 122 3
Q ss_pred cchhH----HHHHHHHHhcCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH-HhhhcCCCceecCCccccceeeeccc
Q 015961 178 FYYTL----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA-VCKHEGIPLRFPGTKAAWECYSIASD 252 (397)
Q Consensus 178 ~~y~~----e~~l~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~~~~~~~~~d 252 (397)
..|+. .+++.|++....|+++-.+|++.++...+.........++.|-. +.+ |+- ..+=..+......+..|
T Consensus 182 TIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~--gk~-tCylrpdtrlpmmy~~d 258 (366)
T KOG2774|consen 182 TIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQK--GKH-TCYLRPDTRLPMMYDTD 258 (366)
T ss_pred eeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHc--CCc-ccccCCCccCceeehHH
Confidence 33664 45566666567899999999998888654333222223333332 222 332 11111223335555555
Q ss_pred HHHHHHHHHH--HhcCCCCCCCceeccCCCeeehHHHHHHHHHHh
Q 015961 253 ADLIAEHQIW--AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 295 (397)
Q Consensus 253 a~~la~~~~~--~~~~~~~~g~~yni~~~~~~s~~el~~~i~~~~ 295 (397)
-. ++++. ++.+.....++||+++ -..|-.|+++.+.+.+
T Consensus 259 c~---~~~~~~~~a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 259 CM---ASVIQLLAADSQSLKRRTYNVTG-FSFTPEEIADAIRRVM 299 (366)
T ss_pred HH---HHHHHHHhCCHHHhhhheeeece-eccCHHHHHHHHHhhC
Confidence 41 12222 2334456678999984 8899999999888765
No 152
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.36 E-value=7.9e-12 Score=112.70 Aligned_cols=155 Identities=15% Similarity=0.039 Sum_probs=102.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
|+|+||||+|+||.+++++|++ +|++|++++|++.... ....+++++++|++|.+++.+.++.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAA-----AGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence 6899999999999999999998 8999999999764210 0124688999999999888776654
Q ss_pred CCCeeEEEEecccCC---C---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961 95 LTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 166 (397)
Q Consensus 95 ~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~ 166 (397)
+|.|+|.++...... . +....+++|+.++.++++++... ..+..+++++||... .++.
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------~~~~-------- 142 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG------DRGR-------- 142 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc------cCCC--------
Confidence 466888765422111 1 33456889999999999887653 122456776664210 1110
Q ss_pred CCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 167 TEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 167 ~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
+ ....|+.. .+...+. ....|+++..++|+.+.+
T Consensus 143 -------~-~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t 183 (243)
T PRK07102 143 -------A-SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRT 183 (243)
T ss_pred -------C-CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccC
Confidence 0 01114432 2222221 145689999999999987
No 153
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.34 E-value=9.2e-12 Score=112.12 Aligned_cols=156 Identities=15% Similarity=0.077 Sum_probs=102.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+|++|||||+|+||..++++|++ +|++|++++|++... . ....++.++.+|++|.+++..+++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAK-----AGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999998 899999999975321 0 012367889999999988766665
Q ss_pred --cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.|+|+++...... ++....+++|+.++.++++++... ..+..+++++||...+ ++.
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~~~---- 149 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR-------NAF---- 149 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC-------cCC----
Confidence 3677888876422111 134566889999988877776432 1224577777643322 110
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
.. ...|+. +.+..... ....|++++++||+.+-.
T Consensus 150 ---------~~--~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t 190 (241)
T PRK07454 150 ---------PQ--WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNT 190 (241)
T ss_pred ---------CC--ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccC
Confidence 01 111443 22222211 134689999999998876
No 154
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.34 E-value=1.2e-11 Score=111.92 Aligned_cols=156 Identities=15% Similarity=0.118 Sum_probs=101.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--C--CCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLVEYVQCDVSDPEETQAKLS-------QL 95 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v~~~~~Dl~d~~~l~~~~~-------~~ 95 (397)
|+|+||||||+||.+++++|++ +|++|++++|++.... . ...++.++.+|++|.+++..+++ ++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQ-----QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999998 8999999999754210 0 11367889999999988776654 57
Q ss_pred CCeeEEEEecccC---C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961 96 TDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 166 (397)
Q Consensus 96 ~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~ 166 (397)
|.|+|+++..... . +.....+++|+.++.++++++... ..+..+++++||...+ .+.
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------------~~~ 141 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS--------------WPY 141 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC--------------CCC
Confidence 7788887643211 1 134567899999976666655432 1235677777642211 000
Q ss_pred CCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 167 TEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 167 ~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
.. ...|+. +.+..... ....++.+.+++|+.+.|.
T Consensus 142 ------~~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 142 ------AG--GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred ------CC--CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 01 112443 33332222 1346799999999999873
No 155
>PRK08643 acetoin reductase; Validated
Probab=99.34 E-value=1.8e-11 Score=111.27 Aligned_cols=157 Identities=18% Similarity=0.091 Sum_probs=101.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
|+|++|||||+|+||.+++++|++ +|++|++++|+.... .. ...++.++.+|++|++++.+++.
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVE-----DGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVD 75 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 568999999999999999999998 899999999975321 00 12356789999999987766654
Q ss_pred ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCC
Q 015961 94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
++|.|+|+++...... +.....+++|+.++..+++++... ...-.+++++||... .++.
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~--- 146 (256)
T PRK08643 76 TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG------VVGN--- 146 (256)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc------ccCC---
Confidence 4677888875422111 133567889999988777766543 111245666664221 1111
Q ss_pred CCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
+. ...|+. +.+...+. ....|++++.++|+.+..
T Consensus 147 ------------~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t 187 (256)
T PRK08643 147 ------------PE-LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKT 187 (256)
T ss_pred ------------CC-CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcC
Confidence 00 112443 22222221 135689999999998877
No 156
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.34 E-value=2.2e-11 Score=110.79 Aligned_cols=158 Identities=11% Similarity=0.056 Sum_probs=105.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
.+++||||||+|+||++++++|++ +|++|++++|++.... ....++.++.+|+++++++...++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAE-----EGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----cCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 358999999999999999999999 8999999998764320 012367899999999998877665
Q ss_pred --cCCCeeEEEEecccC-C----CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTN-R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
.+|.|+|+++..... . ++....+++|+.++.++.+++.+. .....+++++||...+ ++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------~~~------- 147 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL------TGQ------- 147 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc------cCC-------
Confidence 467788987642111 1 134556789999999988877643 1123567777642211 110
Q ss_pred CCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 166 FTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
.+ ...|+. +.+...... ...+++++.++|+.|+++
T Consensus 148 -------~~--~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~ 189 (258)
T PRK08628 148 -------GG--TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTP 189 (258)
T ss_pred -------CC--CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCH
Confidence 01 112553 333333221 346899999999999983
No 157
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.34 E-value=2.7e-11 Score=108.58 Aligned_cols=115 Identities=17% Similarity=0.127 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCH-HHHHHHHccCCCeeEEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIF 102 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~V~h~a 102 (397)
.++|++|||||+|+||.+++++|++ +|++|++++|++.... ..++.++.+|++++ +.+.+.+..+|.|+|++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~a 75 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLA-----QGAQVYGVDKQDKPDL--SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTA 75 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHH-----CCCEEEEEeCCccccc--CCcEEEEECChHHHHHHHHHhhCCCCEEEECC
Confidence 4568999999999999999999998 8999999999764432 24678999999997 44555556678888887
Q ss_pred Eecc--cC-C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 103 YVTW--TN-R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 103 ~~~~--~~-~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
+... .. . ++....+++|+.++.++++++... ..+..+++++||
T Consensus 76 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 127 (235)
T PRK06550 76 GILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS 127 (235)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 6321 11 1 134567899999999999887643 112346777764
No 158
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=2.9e-11 Score=109.53 Aligned_cols=208 Identities=13% Similarity=0.098 Sum_probs=121.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
++++|||||+|+||.++++.|++ +|++|++++|+.... . ....++.++++|++|.+++.++++.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQ-----KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999998 799999999875321 0 0123577899999998877655543
Q ss_pred ---CCCeeEEEEecccC-----------C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccc
Q 015961 95 ---LTDVTHIFYVTWTN-----------R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPF 153 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~-----------~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~ 153 (397)
+|.|+|+++..... . +.....+++|+.++.++++++... ...-..++++|+..
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~------ 153 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA------ 153 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc------
Confidence 56788887632110 0 133456789999998776655432 11123455555322
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeeccCCCcchhHHHHHHHHH
Q 015961 154 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA 226 (397)
Q Consensus 154 ~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 226 (397)
.+|.. +... |+. +.++..+.. ...+++++.++|+.+.++...... ... ..
T Consensus 154 -~~~~~--------------~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~---~~ 210 (253)
T PRK08217 154 -RAGNM--------------GQTN--YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---PEA---LE 210 (253)
T ss_pred -ccCCC--------------CCch--hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---HHH---HH
Confidence 22210 1111 443 333333221 246899999999999873211111 111 00
Q ss_pred HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCCceeccCCC
Q 015961 227 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD 280 (397)
Q Consensus 227 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~~~~~~~~~~~g~~yni~~~~ 280 (397)
... ...+.. ...+..++|..+.+++......|++|++.++.
T Consensus 211 ~~~-~~~~~~------------~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 211 RLE-KMIPVG------------RLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred HHH-hcCCcC------------CCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 000 111211 11234555777777765544578899988753
No 159
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.9e-11 Score=114.48 Aligned_cols=173 Identities=13% Similarity=-0.018 Sum_probs=106.5
Q ss_pred ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHH
Q 015961 21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAK 91 (397)
Q Consensus 21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~ 91 (397)
.++.++|+++||||||+||.+++++|++ .|++|+++.|+.... .....++.++.+|+.|.+++.++
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~-----~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~ 83 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAA-----AGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAAL 83 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHH
Confidence 3445678999999999999999999998 899999999975321 01123578899999999887666
Q ss_pred Hcc-------CCCeeEEEEecccCC-----CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCC
Q 015961 92 LSQ-------LTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGK 158 (397)
Q Consensus 92 ~~~-------~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~ 158 (397)
++. +|.++|.|+...... +..+..+++|+.|...+.+.+... ...-.+++.+||...+.+.
T Consensus 84 ~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~------ 157 (313)
T PRK05854 84 GEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGA------ 157 (313)
T ss_pred HHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCC------
Confidence 543 566888876533211 245667899999977776665432 1112356666654333211
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhHHHHHHH-----HHh----cCCCeeEEEEcCCceee
Q 015961 159 IKPYDPPFTEDMPRLDAPNFYYTLEDILFE-----EVE----KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 159 ~~~~~~~~~E~~p~~~~~~~~y~~e~~l~~-----~~~----~~~g~~~~ilRp~~v~G 208 (397)
. ......++.+..+ ...|+..|.... +.. ...|+.+..+.|+.|-.
T Consensus 158 ~--~~~~~~~~~~~~~--~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 158 I--NWDDLNWERSYAG--MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred c--CcccccccccCcc--hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 0 0111222222212 223665433322 211 13469999999998864
No 160
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.32 E-value=7.6e-11 Score=107.22 Aligned_cols=104 Identities=13% Similarity=0.030 Sum_probs=76.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceEEEccCCCHHHHHHHHc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
++|++|||||+|+||.++++.|++ +|++|+++.++..... ....++.++++|++|++++.+++.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~-----~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 81 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAA-----QGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFD 81 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHH-----CCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHH
Confidence 457999999999999999999998 8999777776532110 011357789999999988876664
Q ss_pred -------cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc
Q 015961 94 -------QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN 133 (397)
Q Consensus 94 -------~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~ 133 (397)
.+|.++|.|+..... . +.....+++|+.++..+++++...
T Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 134 (257)
T PRK12744 82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH 134 (257)
T ss_pred HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 357788887653211 1 134567889999999999988654
No 161
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.4e-11 Score=111.13 Aligned_cols=155 Identities=18% Similarity=0.078 Sum_probs=99.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccCCCHHHHHHHHc-----------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLS----------- 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~----------- 93 (397)
++||||||||+||++++++|++ +|++|++++|+...... ...++.++++|++|.+++..++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQ-----PGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHh-----CCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 4899999999999999999998 89999999997543211 12357889999999988777443
Q ss_pred cCCCeeEEEEecccC--C-----CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCccccccccccCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTN--R-----STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~--~-----~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
..+.++|+++..... . +.....+++|+.++..+.+++.+.. ....+++++||...+ .+
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------~~------ 143 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR-------NA------ 143 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc-------CC------
Confidence 234578877643221 1 1345667899999777766655431 124577777643221 10
Q ss_pred CCCCCCCCCCCCCcchhH-----HHHHHHHHh-cCCCeeEEEEcCCceee
Q 015961 165 PFTEDMPRLDAPNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~~-~~~g~~~~ilRp~~v~G 208 (397)
..+ ...|+. +.++..+.. ...++++..++|+.+-.
T Consensus 144 -------~~~--~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 144 -------YAG--WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred -------CCC--chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 001 122554 333433321 23579999999987744
No 162
>PRK07985 oxidoreductase; Provisional
Probab=99.32 E-value=2.4e-11 Score=112.76 Aligned_cols=158 Identities=12% Similarity=0.039 Sum_probs=102.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
.+|++|||||+|+||.+++++|++ +|++|+++.|+.... . ....++.++.+|++|.+++..++.
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~-----~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAR-----EGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 347999999999999999999999 899999887653211 0 012346788999999987765544
Q ss_pred -----cCCCeeEEEEecccC-------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCC
Q 015961 94 -----QLTDVTHIFYVTWTN-------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~-------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
.+|.++|.|+..... .++....+++|+.++.++++++...-..-.+|+++||...|..
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~---------- 192 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP---------- 192 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC----------
Confidence 356677776532110 1145667899999999999988754212246777765332211
Q ss_pred CCCCCCCCCCCCCCCCcchhHHH-----HHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 162 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
. +. ...|+..| +...... ...|+++.+++|+.|.++
T Consensus 193 --~---------~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~ 235 (294)
T PRK07985 193 --S---------PH-LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_pred --C---------CC-cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccc
Confidence 0 00 11155322 2222210 346899999999999984
No 163
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.4e-11 Score=113.12 Aligned_cols=115 Identities=17% Similarity=-0.020 Sum_probs=81.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------QL 95 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~-------~~ 95 (397)
+++||||||||.||.+++++|++ +|++|++++|++.... .....+.++.+|++|++++.++++ .+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAA-----LGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999998 8999999999753210 011247889999999988765554 35
Q ss_pred CCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 96 TDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 96 ~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
|.++|.|+...... + .....+++|+.|+.++++++... ..+..+++.+||
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS 137 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVAS 137 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 66888776432111 1 34556789999988877766542 123457887774
No 164
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.31 E-value=2.7e-11 Score=108.00 Aligned_cols=159 Identities=20% Similarity=0.188 Sum_probs=108.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHc
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
.+.+++++||||||+-||..++++|.+ +|++|+.+.|+.++- .. ..-.++++.+|+++++++.....
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~-----~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~ 76 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLAR-----RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLED 76 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHH
Confidence 345668999999999999999999999 899999999986531 11 12356799999999987766553
Q ss_pred -------cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCC
Q 015961 94 -------QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK 158 (397)
Q Consensus 94 -------~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~ 158 (397)
.+|..++.|+..... .+...+++++|+.++..|-.+.... ..+-.+++-++|...|..
T Consensus 77 ~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------- 149 (265)
T COG0300 77 ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------- 149 (265)
T ss_pred HHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC-------
Confidence 366677777653322 1145678899999988777766543 122456776664332311
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 159 IKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 159 ~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
.|.... |+. .+.|+... +.+|+.++.+-|+.+.-
T Consensus 150 --------------~p~~av-Y~ATKa~v~~fSeaL~~EL-~~~gV~V~~v~PG~~~T 191 (265)
T COG0300 150 --------------TPYMAV-YSATKAFVLSFSEALREEL-KGTGVKVTAVCPGPTRT 191 (265)
T ss_pred --------------CcchHH-HHHHHHHHHHHHHHHHHHh-cCCCeEEEEEecCcccc
Confidence 121122 332 55555555 78899999999887765
No 165
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.7e-11 Score=112.33 Aligned_cols=115 Identities=18% Similarity=0.137 Sum_probs=82.2
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+++||||||+|+||.+++++|++ +|++|++++|+.... . .....+.++.+|++|.+++.++++
T Consensus 40 ~k~vlItGasggIG~~la~~La~-----~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFAR-----RGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999998 899999999975321 0 011346789999999988877766
Q ss_pred --cCCCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.++|+|+...... ......+++|+.|+.++++++... .....+++++||
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 178 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT 178 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 5677888876432111 123456789999988887766432 112457777764
No 166
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.2e-11 Score=113.67 Aligned_cols=114 Identities=20% Similarity=0.133 Sum_probs=81.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc-------cCCCe
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTDV 98 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~V 98 (397)
|++|||||+|+||++++++|++ +|++|++++|+..... ....++.++.+|++|.+++.++++ .+|.|
T Consensus 2 k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKA-----AGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899999999999999999998 8999999999753210 011357789999999988766553 46779
Q ss_pred eEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecC
Q 015961 99 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG 145 (397)
Q Consensus 99 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~ 145 (397)
+|+++...... ++....+++|+.|+.++++++... .....+++.+||
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 130 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS 130 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 99876432111 134567899999999988887542 111245665553
No 167
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.6e-11 Score=109.95 Aligned_cols=115 Identities=17% Similarity=0.086 Sum_probs=85.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc-------CCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTD 97 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-------~~~ 97 (397)
++|++|||||+|+||++++++|++ .|++|++++|+..... ...++.++.+|+.|.+++.+++.. +|.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~-----~g~~v~~~~r~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLA-----AGATVVVCGRRAPETV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCChhhhh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999998 8999999999764311 124678999999999888776654 477
Q ss_pred eeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961 98 VTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 145 (397)
Q Consensus 98 V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 145 (397)
|+|+|+..... . +..+..+++|+.++.++++++... .....+++++||
T Consensus 79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 135 (252)
T PRK07856 79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS 135 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 88987642211 1 134567899999999999987652 112356777664
No 168
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.8e-11 Score=111.78 Aligned_cols=155 Identities=15% Similarity=0.094 Sum_probs=101.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------ 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~------ 93 (397)
++||||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|++|.+++..++.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~-----~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLAR-----AGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999998 899999999975321 0 012367789999999988777665
Q ss_pred -cCCCeeEEEEecccCC--C-----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 94 -QLTDVTHIFYVTWTNR--S-----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 94 -~~~~V~h~a~~~~~~~--~-----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
.+|.|+|+++...... + .....+++|+.++.++++++... .....+++++||...| ..
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~-------~~------ 143 (263)
T PRK06181 77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGL-------TG------ 143 (263)
T ss_pred CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccccc-------CC------
Confidence 4677899876432210 1 23456899999999999988643 1123566666542221 11
Q ss_pred CCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceee
Q 015961 165 PFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
..+... |+..| +...+. ....++++++++|+.+..
T Consensus 144 -------~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t 185 (263)
T PRK06181 144 -------VPTRSG--YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVAT 185 (263)
T ss_pred -------CCCccH--HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCcccc
Confidence 001112 54322 222211 134689999999998876
No 169
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.30 E-value=3.6e-11 Score=109.91 Aligned_cols=114 Identities=12% Similarity=0.088 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc-------cCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD 97 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~~ 97 (397)
++|++|||||+|+||.+++++|++ +|++|++++|+..... ..++.++.+|++|++++.++++ .+|.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~-----~G~~v~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLA-----NGANVVNADIHGGDGQ--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG 80 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCccccc--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357999999999999999999998 8999999998764431 2467889999999988776654 3577
Q ss_pred eeEEEEecccC---------------CCcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961 98 VTHIFYVTWTN---------------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 145 (397)
Q Consensus 98 V~h~a~~~~~~---------------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 145 (397)
++|+|+..... .++.+..+++|+.++.++++++...- .+..+++++||
T Consensus 81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 145 (266)
T PRK06171 81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSS 145 (266)
T ss_pred EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 88887642210 11335578999999999998886541 12346777664
No 170
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.30 E-value=2.4e-11 Score=109.89 Aligned_cols=158 Identities=13% Similarity=0.067 Sum_probs=103.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLS------ 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~l~~~~~------ 93 (397)
++|+||||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|+++.+++..+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAE-----AGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999 899999999865211 0 012357889999999988776554
Q ss_pred -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEecCCccccccccccCCCCCCC
Q 015961 94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.++|+++...... ...++.+++|+.++.++++++... ... ..+++++||...| ++
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~----- 146 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF-------QG----- 146 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc-------cC-----
Confidence 3666888876432111 134566889999999999887543 111 3567777653322 11
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
.+ ..+. |+. +.+...+.. ...|+++.+++|+.|..+
T Consensus 147 ~~--------~~~~--Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 189 (248)
T TIGR01832 147 GI--------RVPS--YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATN 189 (248)
T ss_pred CC--------CCch--hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCc
Confidence 00 0012 432 333322221 345899999999998873
No 171
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.5e-11 Score=111.72 Aligned_cols=158 Identities=14% Similarity=0.081 Sum_probs=100.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc-------cC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-------QL 95 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~ 95 (397)
++++||||||+|+||.+++++|++ +|++|++++|+.... ........++++|++|.+++..+++ .+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAA-----EGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSV 80 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999998 899999999975421 0001123688999999988777665 35
Q ss_pred CCeeEEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 96 TDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 96 ~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
|.|+|+++...... +.....+++|+.++.++++++... .....+++++||.. ..+|..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~------~~~g~~------ 148 (255)
T PRK06057 81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFV------AVMGSA------ 148 (255)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchh------hccCCC------
Confidence 77888876432111 124567889999988777766432 11234566655311 122210
Q ss_pred CCCCCCCCCCCCcchhHHH-----HHHH---HHhcCCCeeEEEEcCCceeec
Q 015961 166 FTEDMPRLDAPNFYYTLED-----ILFE---EVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~e~-----~l~~---~~~~~~g~~~~ilRp~~v~G~ 209 (397)
.....|+..| +... .. ...|++++++||+.+.++
T Consensus 149 ---------~~~~~Y~~sKaal~~~~~~l~~~~-~~~gi~v~~i~pg~v~t~ 190 (255)
T PRK06057 149 ---------TSQISYTASKGGVLAMSRELGVQF-ARQGIRVNALCPGPVNTP 190 (255)
T ss_pred ---------CCCcchHHHHHHHHHHHHHHHHHH-HhhCcEEEEEeeCCcCCc
Confidence 0011244322 2221 22 345899999999999873
No 172
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.30 E-value=1.1e-10 Score=106.23 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=81.6
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------------C-CCCCCceEEEccCCC
Q 015961 25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------------W-NADHLVEYVQCDVSD 84 (397)
Q Consensus 25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------------~-~~~~~v~~~~~Dl~d 84 (397)
++++|||||||| .||.+++++|++ .|++|+++.|++.+. . ....++.++.+|++|
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 78 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAA-----KGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ 78 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHH-----cCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC
Confidence 557899999996 699999999998 899999999872210 0 001357899999999
Q ss_pred HHHHHHHHcc-------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecC
Q 015961 85 PEETQAKLSQ-------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG 145 (397)
Q Consensus 85 ~~~l~~~~~~-------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~ 145 (397)
.+++..+++. +|.|+|+|+...... ......+++|+.++.++++++... . ....+++++|+
T Consensus 79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss 154 (256)
T PRK12748 79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS 154 (256)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECC
Confidence 9877665543 566888876421111 134556889999999999988643 1 12346777764
No 173
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.30 E-value=3.5e-11 Score=110.33 Aligned_cols=155 Identities=15% Similarity=0.092 Sum_probs=100.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------ 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~------ 93 (397)
|+||||||||+||++++++|++ +|++|++++|+.... . .....+.++.+|++|.+++.+++.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 75 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAR-----EGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW 75 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999 899999999875321 0 112457789999999988777664
Q ss_pred -cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 94 -QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 94 -~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
.+|.|+|.++...... + ..+..+++|+.++.++.+++... ..+..+++++||...+.. .
T Consensus 76 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~ 143 (270)
T PRK05650 76 GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ------------G 143 (270)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC------------C
Confidence 4677888876432211 1 23446789988887766654321 112467777764322110 0
Q ss_pred CCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceeec
Q 015961 165 PFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G~ 209 (397)
+ ....|+..|. +.... ...|+++++++|+.+..+
T Consensus 144 ---------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~ 185 (270)
T PRK05650 144 ---------P-AMSSYNVAKAGVVALSETLLVEL-ADDEIGVHVVCPSFFQTN 185 (270)
T ss_pred ---------C-CchHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEecCccccC
Confidence 0 0112443222 22222 346899999999999873
No 174
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.30 E-value=2.9e-11 Score=107.50 Aligned_cols=163 Identities=15% Similarity=0.076 Sum_probs=102.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHc-----cCCCeeE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-----QLTDVTH 100 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~-----~~~~V~h 100 (397)
++++||||+|+||++++++|++ .|++|++++|++.... ....+++++.+|++|.+++..++. .+|.|+|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRA-----DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHh-----CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 6899999999999999999998 8999999999754311 111346789999999988877542 2566888
Q ss_pred EEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961 101 IFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171 (397)
Q Consensus 101 ~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p 171 (397)
+++..... .++.+..+++|+.++.++++++.+. ...-.+++++||.. ..++. .+. .+
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~------~~~~~-----~~~---~~ 142 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM------GSIGD-----ATG---TT 142 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc------ccccc-----ccC---CC
Confidence 77643111 1145667899999999999988753 11123455555321 12221 000 00
Q ss_pred CCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 172 RLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 172 ~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
..+......+.+.++..+..+..+++++.++|+.+.-
T Consensus 143 ~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t 179 (222)
T PRK06953 143 GWLYRASKAALNDALRAASLQARHATCIALHPGWVRT 179 (222)
T ss_pred ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeec
Confidence 0011111122344444443233468999999998876
No 175
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=2.1e-11 Score=110.46 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=101.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C--CCCCCceEEEccCCCHHHHHHHHcc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W--NADHLVEYVQCDVSDPEETQAKLSQ----- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~--~~~~~v~~~~~Dl~d~~~l~~~~~~----- 94 (397)
++|+||||||+|+||+++++.|++ +|++|+++.++.... . ....++.++.+|+.|++++.++++.
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAR-----EGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 347899999999999999999998 899998776543211 0 0113678899999999888776653
Q ss_pred ---CCCeeEEEEeccc-------CC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961 95 ---LTDVTHIFYVTWT-------NR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 95 ---~~~V~h~a~~~~~-------~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
+|.++|.|+.... .. ++....+++|+.++.++++++... ..+..+++++||.. +
T Consensus 79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~---------~ 149 (253)
T PRK08642 79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL---------F 149 (253)
T ss_pred CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcc---------c
Confidence 6778888753211 00 133556899999999999988643 11235666665311 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G 208 (397)
.. +..+... |+. +.++..+.. ...|+.+..++|+.+--
T Consensus 150 -----~~------~~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t 194 (253)
T PRK08642 150 -----QN------PVVPYHD--YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRT 194 (253)
T ss_pred -----cC------CCCCccc--hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCC
Confidence 00 1111112 443 444444321 34579999999998865
No 176
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.29 E-value=3.4e-11 Score=107.25 Aligned_cols=113 Identities=18% Similarity=0.197 Sum_probs=81.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc-----cCCCee
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-----QLTDVT 99 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~-----~~~~V~ 99 (397)
++|+||||+|+||++++++|++ .|++|++++|++... .....++.++.+|++|.+++.++++ .+|.|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLE-----RGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHh-----CCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 6899999999999999999998 899999999986432 1112467788999999987766665 367788
Q ss_pred EEEEecccCC--------CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEec
Q 015961 100 HIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQT 144 (397)
Q Consensus 100 h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s 144 (397)
|+++...... .+....+++|+.++.++++++.... ....+++++|
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~s 130 (225)
T PRK08177 77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMS 130 (225)
T ss_pred EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEc
Confidence 8876532111 1334566889999998888876541 1123455554
No 177
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=1.3e-11 Score=110.86 Aligned_cols=158 Identities=15% Similarity=0.082 Sum_probs=99.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
++++||||||+|+||+++++.|++ .|++|++++|++... .....+++++.+|++|++++.++++.
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALK-----EGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999975421 01113578899999999887665543
Q ss_pred ---CCCeeEEEEecccCC----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCC
Q 015961 95 ---LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 167 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~ 167 (397)
+|.++|.++...... +..+..+++|+.+..++++.+...-.+-.+++++|+... .++. .
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~------~~~~-----~--- 144 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG------IYKA-----S--- 144 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh------cccC-----C---
Confidence 466777654321111 123455788999988887776654111234565553110 1110 0
Q ss_pred CCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961 168 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 168 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G 208 (397)
+ +... |.. +.++..+.. ...+++++++||+.+++
T Consensus 145 ---~--~~~~--Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~ 185 (238)
T PRK05786 145 ---P--DQLS--YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISG 185 (238)
T ss_pred ---C--CchH--HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCC
Confidence 0 1111 443 323322221 34589999999999998
No 178
>PRK12742 oxidoreductase; Provisional
Probab=99.29 E-value=3.5e-11 Score=107.98 Aligned_cols=159 Identities=13% Similarity=0.040 Sum_probs=100.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHcc---CCC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ---LTD 97 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~ 97 (397)
.++|+||||||+|.||++++++|++ +|++|+++.|+.... .....++.++.+|++|.+++.+.+.. +|.
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 78 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVT-----DGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDI 78 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence 3468999999999999999999998 899998877643211 10112467889999999887776654 566
Q ss_pred eeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCC
Q 015961 98 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 171 (397)
Q Consensus 98 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p 171 (397)
++|+++...... ++.+..+++|+.++.+++.++...-..-.+++++||. .+. .. +
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~---------~~~----~~------~ 139 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV---------NGD----RM------P 139 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc---------ccc----cC------C
Confidence 778765432111 1346678999999998876665431123466666531 110 00 1
Q ss_pred CCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961 172 RLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 172 ~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G 208 (397)
..+... |+. +.+...... ...|+++.+++|+.+..
T Consensus 140 ~~~~~~--Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t 181 (237)
T PRK12742 140 VAGMAA--YAASKSALQGMARGLARDFGPRGITINVVQPGPIDT 181 (237)
T ss_pred CCCCcc--hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccC
Confidence 111112 442 433333221 34679999999998876
No 179
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.29 E-value=2.6e-11 Score=109.59 Aligned_cols=159 Identities=14% Similarity=0.074 Sum_probs=98.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
|+|+||||||+|+||+.+++.|++ +|++|+++.++.... . ....++.++.+|+.|.+++.++++
T Consensus 1 m~k~ilItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAA-----RGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQ 75 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 668999999999999999999998 899987765433211 0 012367899999999987766554
Q ss_pred ----cCCCeeEEEEecccCC---C----cHHHHHHhHHHHHHHHHHHHccc-CC----CcceEEEecCCccccccccccC
Q 015961 94 ----QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPN-AP----NLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~-~~----~~~~~~~~s~~~~y~ss~~~~g 157 (397)
.+|.++|+|+...... + +....+++|+.++.++++++.+. .. +-.+++++||... .+|
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~------~~~ 149 (248)
T PRK06947 76 SAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIAS------RLG 149 (248)
T ss_pred HhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhh------cCC
Confidence 4677888876432111 1 23456889999998887644332 11 1234676664221 222
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
. .. .... |+. +.+...+.. ...+++++++||+.+..+
T Consensus 150 ~----~~---------~~~~--Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~ 193 (248)
T PRK06947 150 S----PN---------EYVD--YAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETE 193 (248)
T ss_pred C----CC---------CCcc--cHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccc
Confidence 1 00 0011 432 322222221 345799999999999873
No 180
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.28 E-value=1.3e-10 Score=105.48 Aligned_cols=154 Identities=16% Similarity=0.140 Sum_probs=97.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCCCCCC-------CC--CCCCceEEEccCCCHHHHHHHHc-
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEETQAKLS- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~l~~~~~- 93 (397)
.+++||||||+|.||.+++++|++ + |++|++++|++... .. ...+++++.+|++|.+++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~-----~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~ 81 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLK-----NAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDA 81 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHh-----cCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHH
Confidence 457899999999999999999998 5 58999999976531 10 11267899999999887554443
Q ss_pred -----cCCCeeEEEEecccCCC---cH---HHHHHhHHHHHHH----HHHHHcccCCCcceEEEecCCccccccccccCC
Q 015961 94 -----QLTDVTHIFYVTWTNRS---TE---AENCKINGSMFRN----VLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK 158 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~~---~~---~~~~~~nv~gt~~----ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~ 158 (397)
.+|.++|.++....... ++ .+.+++|+.++.+ +++.+++.+ ..+++++||...+.
T Consensus 82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~isS~~g~~-------- 151 (253)
T PRK07904 82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMSSVAGER-------- 151 (253)
T ss_pred HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEechhhcC--------
Confidence 46667776654321111 11 2357999998876 455555432 46777776432110
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhHHH--------HHHHHHhcCCCeeEEEEcCCceee
Q 015961 159 IKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 159 ~~~~~~~~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
.. + . ...|+..| .+.... +..++++++++|+.+.-
T Consensus 152 ----~~------~--~--~~~Y~~sKaa~~~~~~~l~~el-~~~~i~v~~v~Pg~v~t 194 (253)
T PRK07904 152 ----VR------R--S--NFVYGSTKAGLDGFYLGLGEAL-REYGVRVLVVRPGQVRT 194 (253)
T ss_pred ----CC------C--C--CcchHHHHHHHHHHHHHHHHHH-hhcCCEEEEEeeCceec
Confidence 00 0 1 11144322 233333 56789999999999876
No 181
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.27 E-value=2e-10 Score=103.35 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=78.7
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
|.+|||||+|+||++++++|++ .|++|+++.|+.... . ....++.++.+|++|++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAK-----DGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE 75 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999998 899999998842211 0 012357899999999987766554
Q ss_pred --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|+++..... .++....+++|+.++..+++++... ..+..+++++||
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss 137 (242)
T TIGR01829 76 LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISS 137 (242)
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 356788887643211 1134566789999987766655332 123457777764
No 182
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.27 E-value=1.7e-10 Score=100.05 Aligned_cols=155 Identities=20% Similarity=0.155 Sum_probs=103.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHH-------c
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKL-------S 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~-------~ 93 (397)
+|.|+|||||+-||.++++.|.+ .|++|++..|+.+.- ......+..+..|++|.+++.+++ .
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~-----~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAE-----AGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHH-----CCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 47899999999999999999999 899999999986531 111135778999999998754444 3
Q ss_pred cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCCC
Q 015961 94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 165 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~ 165 (397)
.+|.++|-|+.+-... ++.+.++++|+.|..+...++... ..+-.+++.+||+. |.. +
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA---------G~~-----~ 146 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA---------GRY-----P 146 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc---------ccc-----c
Confidence 4676777766543311 156788999999998888877654 12234677665422 110 0
Q ss_pred CCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 166 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 166 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
.|.... |+. .+-|+..+ ...+++++.+-|+.|-.
T Consensus 147 -------y~~~~v-Y~ATK~aV~~fs~~LR~e~-~g~~IRVt~I~PG~v~~ 188 (246)
T COG4221 147 -------YPGGAV-YGATKAAVRAFSLGLRQEL-AGTGIRVTVISPGLVET 188 (246)
T ss_pred -------CCCCcc-chhhHHHHHHHHHHHHHHh-cCCCeeEEEecCceecc
Confidence 111111 443 33333333 45679999999998855
No 183
>PRK09242 tropinone reductase; Provisional
Probab=99.26 E-value=2.2e-10 Score=104.14 Aligned_cols=158 Identities=16% Similarity=-0.002 Sum_probs=102.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHHc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
.+|++|||||+|.||++++++|.+ +|++|++++|+.... .....++.++.+|+++.+++..++.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLG-----LGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 358999999999999999999998 899999999975321 0012357788999999987665554
Q ss_pred -----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCC
Q 015961 94 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK 160 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~ 160 (397)
.+|.|+|+++..... .++....+++|+.++.++++++... ..+..+++++||...+ ..
T Consensus 83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~-------~~-- 153 (257)
T PRK09242 83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL-------TH-- 153 (257)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC-------CC--
Confidence 356677776542111 1144567899999999998887542 1124567777643211 10
Q ss_pred CCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 161 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 161 ~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
. ..... |+. +.++..+. ....++++..++|+.+..+
T Consensus 154 -----~------~~~~~--Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~ 196 (257)
T PRK09242 154 -----V------RSGAP--YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTP 196 (257)
T ss_pred -----C------CCCcc--hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCc
Confidence 0 01111 332 33332221 1346899999999999874
No 184
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.26 E-value=6.5e-11 Score=107.48 Aligned_cols=116 Identities=17% Similarity=0.107 Sum_probs=84.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
.+++||||||+|+||.+++++|++ +|++|++++|+.... ......+..+.+|+++.+++..++.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAA-----KGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999998 899999999975321 0112346689999999988776654
Q ss_pred cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|+++...... .+....+++|+.++.++++++... .....+++++||
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 4577888876432111 133557899999999999988653 112457777764
No 185
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.26 E-value=5.7e-11 Score=108.22 Aligned_cols=116 Identities=17% Similarity=0.078 Sum_probs=83.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC---CCCCceEEEccCCCHHHHHHHHc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
.+|+||||||+|+||.+++++|++ +|++|++++|+.... .. ...++.++.+|++|++++..+++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAR-----EGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA 80 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence 357999999999999999999998 899999999965321 00 12357789999999988777665
Q ss_pred -----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.++|+|+..... .++....+++|+.++.++++++... .....+++++||
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 145 (260)
T PRK07063 81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS 145 (260)
T ss_pred HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECC
Confidence 467788887643211 1134566889999998888877543 112356777664
No 186
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.26 E-value=7.4e-11 Score=107.20 Aligned_cols=115 Identities=17% Similarity=0.092 Sum_probs=78.9
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHc-------cCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLS-------QLT 96 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~-------~~~ 96 (397)
+|+++||||+|+||.+++++|.+ .|++|+++.|+..... ....++.++.+|++|++++.++++ .+|
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLR-----EGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD 81 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999 8999988877543210 111257889999999988777665 457
Q ss_pred CeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 97 DVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 97 ~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.|+|+++..... . ++....+++|+.++..+..++.+. ..+..+++++||
T Consensus 82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS 138 (255)
T PRK06463 82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIAS 138 (255)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 788887643211 0 134567889999965554443221 112356777765
No 187
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.25 E-value=5.1e-11 Score=108.71 Aligned_cols=116 Identities=20% Similarity=0.212 Sum_probs=82.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
.++++|||||+|+||++++++|++ +|++|++++|+.... . ....++.++.+|+++.+++..++.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFAR-----HGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 458999999999999999999999 899999999975311 0 012356789999999988777655
Q ss_pred --cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|.++...... + ..+..+++|+.++.++++++... .....+++++||
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 141 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSS 141 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 3567888876432211 1 23456889999999998887643 112346666653
No 188
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.25 E-value=1.4e-10 Score=106.61 Aligned_cols=104 Identities=15% Similarity=0.039 Sum_probs=78.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--------------CCCCCceEEEccCCCHHHHHH
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------------NADHLVEYVQCDVSDPEETQA 90 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--------------~~~~~v~~~~~Dl~d~~~l~~ 90 (397)
+++++|||||+|+||++++++|++ +|++|++++|+..... ....++.++.+|+++++++..
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~ 79 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAAR-----DGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA 79 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 347899999999999999999998 8999999999753210 011356788999999988776
Q ss_pred HHc-------cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc
Q 015961 91 KLS-------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN 133 (397)
Q Consensus 91 ~~~-------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~ 133 (397)
++. .+|.|+|+|+...... + +....+++|+.++.++++++...
T Consensus 80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 665 4677888876532211 1 34557789999999999988653
No 189
>PRK08017 oxidoreductase; Provisional
Probab=99.25 E-value=9.7e-11 Score=106.38 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=78.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHcc--------C
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--------L 95 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~--------~ 95 (397)
|.++||||||+|+||.++++.|++ +|++|++++|+.... .....+++.+.+|+.|.+++..++.. +
T Consensus 1 m~k~vlVtGasg~IG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 75 (256)
T PRK08017 1 MQKSVLITGCSSGIGLEAALELKR-----RGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRL 75 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 457899999999999999999998 899999999975432 11123578899999999877665543 3
Q ss_pred CCeeEEEEecccCC------CcHHHHHHhHHHHHHHH----HHHHcccCCCcceEEEecC
Q 015961 96 TDVTHIFYVTWTNR------STEAENCKINGSMFRNV----LRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 96 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~l----l~a~~~~~~~~~~~~~~s~ 145 (397)
+.++|.++...... +.....+++|+.|+.++ ++++++.+ ..+++++||
T Consensus 76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~iv~~ss 133 (256)
T PRK08017 76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG--EGRIVMTSS 133 (256)
T ss_pred eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CCEEEEEcC
Confidence 44667655321111 13456789999998776 45554432 456776664
No 190
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.25 E-value=4e-11 Score=109.47 Aligned_cols=116 Identities=20% Similarity=0.122 Sum_probs=84.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
.++++|||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|+++.+++..++.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAE-----AGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999975321 0 012357889999999988766554
Q ss_pred ---cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961 94 ---QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 145 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 145 (397)
.+|.|+|+|+..... . ++....+++|+.++.++++++... .....+++.+|+
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS 147 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS 147 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 467789987642211 1 145677899999999999998642 112456776653
No 191
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.24 E-value=1.4e-10 Score=105.36 Aligned_cols=116 Identities=16% Similarity=0.052 Sum_probs=82.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
.+|+|+||||+|+||++++++|++ .|++|++++|++... . ....++.++.+|++|++++..+++.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAG-----AGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 468999999999999999999998 899999999975321 0 0123578999999999887766653
Q ss_pred ----CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 95 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
+|.|+|.++..... . ++.+..+++|+.++.++.+++.+. .....+++++|+
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss 147 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITS 147 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEee
Confidence 45678876542211 0 134556889999999988776542 122456776664
No 192
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.24 E-value=7.5e-11 Score=107.24 Aligned_cols=104 Identities=20% Similarity=0.103 Sum_probs=78.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
..+++||||||+|+||++++++|++ .|++|+++.|+.... . ....++.++.+|+++.+++.+.++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQ-----AGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE 81 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 4568999999999999999999998 899999999975321 0 012357899999999988877665
Q ss_pred ----cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcc
Q 015961 94 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIP 132 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~ 132 (397)
.+|.++|+++..... ..+.+..+++|+.++.++++++..
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (258)
T PRK06949 82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK 130 (258)
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence 367788887642211 114566788999999988887753
No 193
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.1e-10 Score=106.51 Aligned_cols=116 Identities=12% Similarity=0.116 Sum_probs=82.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
.++++|||||+|.||.+++++|++ +|++|++++|+.... . ....++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVA-----AGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 458999999999999999999998 899999999975421 0 012357889999999988777665
Q ss_pred cCCCeeEEEEecccC---C--CcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961 94 QLTDVTHIFYVTWTN---R--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG 145 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~---~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~ 145 (397)
.+|.++|+|+..... . +.....+++|+.++.++++++...- .+-.+++++||
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS 137 (261)
T PRK08265 80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS 137 (261)
T ss_pred CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 356788876532111 1 1345678899999998888776431 12346666664
No 194
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.23 E-value=9.9e-11 Score=106.54 Aligned_cols=157 Identities=14% Similarity=0.094 Sum_probs=102.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
++|+||||||+|+||.+++++|++ .|++|+++.|+.... . ....++.++.+|++|.+++..+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAK-----AGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE 88 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999998 899999999873211 0 012357899999999988777665
Q ss_pred --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.++|+++..... .++.+..+++|+.++.++++++... ..+..+++++|+...+.+
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 156 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG------------ 156 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC------------
Confidence 467788887643211 1134567789999988777766543 122456777764322211
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceee
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 208 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G 208 (397)
. + ..+. |+. +.+...+.. ...|+++.+++|+.|..
T Consensus 157 ~------~--~~~~--Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t 198 (258)
T PRK06935 157 G------K--FVPA--YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKT 198 (258)
T ss_pred C------C--Cchh--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccc
Confidence 0 0 0011 442 333332221 34579999999998876
No 195
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.3e-10 Score=105.48 Aligned_cols=116 Identities=18% Similarity=0.031 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
++|++|||||+|.||.+++++|.+ .|++|++++|++.+. . ....++.++.+|++|++++.++++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAR-----EGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999975421 0 011357789999999988776665
Q ss_pred ---cCCCeeEEEEeccc--CC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 ---QLTDVTHIFYVTWT--NR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~--~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.++|.|+.... .. ++....+++|+.++..+.+++... ..+..+++++||
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS 143 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTST 143 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 45667777664211 10 134567899998877765554332 112346776664
No 196
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.22 E-value=2.3e-10 Score=102.88 Aligned_cols=115 Identities=17% Similarity=0.097 Sum_probs=77.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCH--HHHHHH---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDP--EETQAK--- 91 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~--~~l~~~--- 91 (397)
.+++|+||||+|+||.+++++|++ +|++|++++|+.... ......+.++.+|+.+. +++..+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAA-----AGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT 79 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH
Confidence 357999999999999999999998 899999999976421 00113456788999753 333322
Q ss_pred ----H-ccCCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 015961 92 ----L-SQLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT 144 (397)
Q Consensus 92 ----~-~~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s 144 (397)
+ ..+|.|+|+|+..... .+ +....+++|+.++.++++++.+. ...-.+++++|
T Consensus 80 i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s 146 (239)
T PRK08703 80 IAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVG 146 (239)
T ss_pred HHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 2 3467799998753211 11 34456899999999988887653 11124555554
No 197
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.22 E-value=1.1e-10 Score=105.97 Aligned_cols=158 Identities=11% Similarity=0.008 Sum_probs=103.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
.+|++|||||+|+||.+++++|++ +|++|++++|+.... .. ...++..+.+|++|.+++.+++..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~-----~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAE-----YGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999998 899999999975321 00 113567889999999887766543
Q ss_pred ----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.|+|+++..... .++....+++|+.++.++++++... ..+..+++++||... .++.
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~------~~~~---- 152 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS------ELGR---- 152 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh------ccCC----
Confidence 57788887643211 1134567899999998888877653 122456777664211 1110
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
..... |+. +.+...+.. ...|+++..++|+.+..+
T Consensus 153 ----------~~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~ 194 (254)
T PRK08085 153 ----------DTITP--YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTE 194 (254)
T ss_pred ----------CCCcc--hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCc
Confidence 01112 332 333333221 345899999999999884
No 198
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.6e-10 Score=104.95 Aligned_cols=159 Identities=13% Similarity=-0.004 Sum_probs=101.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
+|++|||||+|+||++++++|.+ .|++|++++|+.... .. ...++.++.+|++|++++.+++..
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQ-----AGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 57999999999999999999998 899999999875321 00 123577899999999887766554
Q ss_pred ----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.++|+|+..... .++.+..+++|+.++..+++++... ..+..+++++||...+ .+.
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------~~~---- 152 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI------IVN---- 152 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc------CCC----
Confidence 46788887643211 1134667889999998777765432 1123466666642211 110
Q ss_pred CCCCCCCCCCCCCCCcchhHHH-----HHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 163 DPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
.. .+ ...|+..| +..... ....|+++.+++|+.+..+
T Consensus 153 ~~--------~~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~ 196 (254)
T PRK06114 153 RG--------LL--QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP 196 (254)
T ss_pred CC--------CC--cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCc
Confidence 00 00 11254322 222221 1356899999999998773
No 199
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1e-10 Score=106.05 Aligned_cols=115 Identities=19% Similarity=0.120 Sum_probs=81.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
+|+||||||+|+||.+++++|++ .|++|++++|+.... . ....++.++.+|++|.+++..+++.
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAR-----EGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999975321 0 0123578899999999887776654
Q ss_pred ---CCCeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 95 ---LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
+|.|+|+++...... ++..+.+++|+.++.++++++... ..+..+++++||
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS 144 (253)
T PRK06172 82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTAS 144 (253)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 477888876422111 144567889999997776654322 112356776664
No 200
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.2e-10 Score=106.24 Aligned_cols=115 Identities=18% Similarity=0.151 Sum_probs=82.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc------
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------ 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~------ 93 (397)
+++||||||+|+||.+++++|++ +|++|++++|++... .....++.++.+|++|.+++..+++
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAA-----AGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 57899999999999999999998 899999999975321 1112468899999999987766544
Q ss_pred cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|+|+..... . +.....+++|+.|+.++++++... .....+++++||
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 457788887643211 1 134567789999999999888653 112345665553
No 201
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.21 E-value=1.2e-10 Score=106.52 Aligned_cols=117 Identities=16% Similarity=0.026 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
.++++||||||+|+||++++++|++ .|++|++++|++... . ....++.++.+|++|.+++..+++.
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFAR-----AGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIA 81 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3458999999999999999999998 899999999975321 0 0113567889999999887776644
Q ss_pred -----CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961 95 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG 145 (397)
Q Consensus 95 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~ 145 (397)
+|.++|+|+..... .++....+++|+.++.++++++...- .+-.+++++|+
T Consensus 82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss 144 (264)
T PRK07576 82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISA 144 (264)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 57788876532111 11345667899999999998876531 11136666654
No 202
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.21 E-value=8.6e-11 Score=106.57 Aligned_cols=115 Identities=16% Similarity=0.038 Sum_probs=82.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+|++|||||+|.||+++++.|++ .|++|++++|+.... .. ...++.++.+|++|++++.+++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAE-----EGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK 75 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 37899999999999999999998 899999999975321 00 12467889999999988766554
Q ss_pred --cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 145 (397)
.+|.|+|+++...... + .....+++|+.++.++++++.+. ...-.+++++|+
T Consensus 76 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 138 (252)
T PRK07677 76 FGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA 138 (252)
T ss_pred hCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 3566888765322111 1 34667899999999999988542 111356776664
No 203
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.21 E-value=3e-10 Score=101.44 Aligned_cols=110 Identities=16% Similarity=0.052 Sum_probs=80.4
Q ss_pred EEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc---CCCeeE
Q 015961 30 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH 100 (397)
Q Consensus 30 LVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~V~h 100 (397)
|||||+|+||++++++|++ +|++|++++|++... .....+++++.+|++|.+++.+++.. +|.++|
T Consensus 1 lItGas~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAA-----EGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 6999999999999999999 899999999974321 00124678899999999999888876 456777
Q ss_pred EEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCC
Q 015961 101 IFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT 146 (397)
Q Consensus 101 ~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~ 146 (397)
.++..... .++....+++|+.++.+++++.... ...+++++||.
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~g~iv~~ss~ 125 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA--PGGSLTFVSGF 125 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc--CCeEEEEECch
Confidence 76542211 1145667899999999999855432 35677777643
No 204
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.21 E-value=2e-10 Score=104.52 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=103.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCCC-------CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
.++|+|+||||+|+||++++++|.+ .|++ |++++|+..... .....+.++.+|+++++++.+++.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAE-----RGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAA 78 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHH-----CCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 3458899999999999999999998 7888 999998753210 012356788999999988776654
Q ss_pred -----cCCCeeEEEEecccC---CC---cHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecCCccccccccccCCC
Q 015961 94 -----QLTDVTHIFYVTWTN---RS---TEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~---~~---~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
++|.|+|+++..... .. .....+++|+.++.++++++.+.. ....+++++|+...+ +.
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~-------~~- 150 (260)
T PRK06198 79 DEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH-------GG- 150 (260)
T ss_pred HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc-------cC-
Confidence 467788987643211 11 235568999999999988875431 112467766643322 11
Q ss_pred CCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
.+ .... |+. +.+..... ....+++++.++|+.+.++
T Consensus 151 ----~~--------~~~~--Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~ 193 (260)
T PRK06198 151 ----QP--------FLAA--YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATE 193 (260)
T ss_pred ----CC--------Ccch--hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCc
Confidence 00 0011 443 32222221 1345799999999999884
No 205
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.20 E-value=2.6e-10 Score=103.08 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=82.1
Q ss_pred ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCC--CHHHHHH
Q 015961 21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVS--DPEETQA 90 (397)
Q Consensus 21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~--d~~~l~~ 90 (397)
.....+++||||||+|+||.+++++|++ .|++|++++|+.... .....++.++.+|+. +.+++.+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 81 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYAR-----HGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQ 81 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHH-----CCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHH
Confidence 3455678999999999999999999998 899999999975321 001235677888886 4544333
Q ss_pred -------HHccCCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 91 -------KLSQLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 91 -------~~~~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+..+|.|+|.|+..... . +.....+++|+.++.++++++... ..+..+|+++|+
T Consensus 82 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 82 LADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 234567799987643221 1 134667899999988888877532 123567777664
No 206
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.20 E-value=1.6e-10 Score=105.04 Aligned_cols=116 Identities=13% Similarity=0.048 Sum_probs=82.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
.+|+||||||+|+||.+++++|.+ .|++|++++|+.... . ....++.++.+|++|.+++.+++.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~-----~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 468999999999999999999998 899999999864321 0 011356788999999988766554
Q ss_pred ---cCCCeeEEEEecccC-C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 ---QLTDVTHIFYVTWTN-R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.++|+++..... . +.....+++|+.++.++++++... .....+++++||
T Consensus 85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 356788887643211 1 134556899999999999988642 112246776664
No 207
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.19 E-value=3.2e-10 Score=102.83 Aligned_cols=158 Identities=10% Similarity=0.028 Sum_probs=98.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
++|++|||||+|+||.+++++|++ .|++|+++.++. ... . .....+..+.+|+++.+++...+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLAN-----DGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD 77 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHH
Confidence 358999999999999999999998 899998875432 210 0 011345678899999875543321
Q ss_pred ----------cCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccC
Q 015961 94 ----------QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 94 ----------~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
.+|.++|+|+..... .+ ..+..+++|+.++..+++++...-.+-.+++++||...+.
T Consensus 78 ~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------- 150 (252)
T PRK12747 78 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI------- 150 (252)
T ss_pred HHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-------
Confidence 467788887743211 11 2356678999999999987765422224677776432111
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
+.. .... |+. +.+...+. ....|+++..+.|+.|.++
T Consensus 151 -------~~~------~~~~--Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~ 194 (252)
T PRK12747 151 -------SLP------DFIA--YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD 194 (252)
T ss_pred -------CCC------Cchh--HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence 000 1112 543 22222221 1356899999999999873
No 208
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.8e-10 Score=104.40 Aligned_cols=117 Identities=13% Similarity=0.083 Sum_probs=81.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
.++|+||||||+|+||.+++++|++ .|++|++++|+.... . .....+.++++|+.|.+++..+++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQ-----QGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 4468999999999999999999998 899999999975321 0 011346788999999987766554
Q ss_pred ----cCCCeeEEEEeccc--C--CC---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 ----QLTDVTHIFYVTWT--N--RS---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~--~--~~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.++|+++.... . .. .....+++|+.++.++++++.+. .....+++++||
T Consensus 81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (252)
T PRK07035 81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS 145 (252)
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence 35668887753110 1 11 34567889999998888777443 123456776664
No 209
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.19 E-value=2.9e-10 Score=107.42 Aligned_cols=117 Identities=18% Similarity=0.052 Sum_probs=80.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
.+++|+||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|++|.++++++++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~-----~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFAR-----RGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE 81 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 357899999999999999999998 899999999975321 0 012357789999999998877654
Q ss_pred ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCC
Q 015961 94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT 146 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~ 146 (397)
.+|.++|.++...... +.....+++|+.|+.++..++... ..+..+++++||.
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~ 145 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA 145 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence 4677888876422111 133456788888776655544332 1123567777653
No 210
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.18 E-value=1.7e-10 Score=105.48 Aligned_cols=158 Identities=15% Similarity=0.074 Sum_probs=102.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHcc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
.+|++|||||+|+||.+++++|++ .|++|+++.|+.... .. ...++.++++|++|.+++..++..
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAK-----AGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999998 899999998875321 10 113578899999999887776643
Q ss_pred ----CCCeeEEEEecccC---C---CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ----LTDVTHIFYVTWTN---R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~---~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.++|+++..... . +.....+++|+.++..+++++... ..+..+++++||.. ..++.
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~------~~~~~---- 153 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM------SELGR---- 153 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc------ccCCC----
Confidence 56788887653221 1 134566789999988887776542 11245677666321 11211
Q ss_pred CCCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceeec
Q 015961 163 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G~ 209 (397)
..... |+. +.+...+. ....|+.+..++|+.+..+
T Consensus 154 ----------~~~~~--Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (265)
T PRK07097 154 ----------ETVSA--YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATP 195 (265)
T ss_pred ----------CCCcc--HHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccccc
Confidence 01112 442 33333222 1346899999999999874
No 211
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.18 E-value=2.1e-10 Score=103.95 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=82.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLS------ 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~l~~~~~------ 93 (397)
.+|++|||||+|.||.+++++|++ .|++|++++|+.... . ....++.++.+|++|.+++.++++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAK-----AGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 358999999999999999999999 899999998864211 0 012357789999999988877665
Q ss_pred -cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCC
Q 015961 94 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGT 146 (397)
Q Consensus 94 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~ 146 (397)
.+|.++|.|+...... ++.+..+++|+.++..+.+++... ...-.+++++||.
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~ 144 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASM 144 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCCh
Confidence 3566778766432111 144567889999988888876543 1112467777643
No 212
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.18 E-value=4.4e-10 Score=115.47 Aligned_cols=156 Identities=13% Similarity=0.075 Sum_probs=99.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
.+|+||||||+|+||++++++|++ .|++|++++|+.... . .....+..+.+|++|.+++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~-----~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAA-----EGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 458999999999999999999998 899999999975321 0 011246688999999998877765
Q ss_pred -----cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCC
Q 015961 94 -----QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
++|.|+|+|+...... + .....+++|+.+...+..++... ...-.+++++||... .++.
T Consensus 488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a------~~~~- 560 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA------VYAG- 560 (676)
T ss_pred HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh------cCCC-
Confidence 4677899887533211 1 23456788888877665444322 111235666664211 1110
Q ss_pred CCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCcee
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF 207 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~ 207 (397)
+ ....|+. +.+...+.. ...|+++..++|+.|+
T Consensus 561 --------------~-~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 561 --------------K-NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred --------------C-CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 0 0122554 333333221 2457999999999887
No 213
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.18 E-value=3e-10 Score=103.07 Aligned_cols=103 Identities=17% Similarity=0.026 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
.+|++|||||+|.||.+++++|++ .|++|++++|+.... . ....++..+.+|++|++++.++++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVE-----AGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 458999999999999999999999 899999999975321 0 012357788999999988766654
Q ss_pred ---cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcc
Q 015961 94 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIP 132 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~ 132 (397)
.+|.++|+++...... +.....+++|+.++..+++++..
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK 130 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH
Confidence 5677888876432111 13355678999999999888754
No 214
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.18 E-value=2.2e-10 Score=103.35 Aligned_cols=115 Identities=19% Similarity=0.200 Sum_probs=78.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
+|.+|||||+|+||++++++|++ .|++|+++.++.... . .....+..+.+|+.|.+++.++++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHK-----DGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA 77 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999 899988865432111 0 011246678999999988776654
Q ss_pred ---cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.|+|+++..... .++....+++|+.++.++.+++... .....+++++||
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 140 (246)
T PRK12938 78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS 140 (246)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence 467788887643211 1144667899999977766655432 123457777764
No 215
>PRK07069 short chain dehydrogenase; Validated
Probab=99.17 E-value=4.2e-10 Score=101.85 Aligned_cols=112 Identities=18% Similarity=0.092 Sum_probs=78.2
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC---CCCCceEEEccCCCHHHHHHHHc----
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN---ADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~---~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
+||||||+|+||.++++.|++ +|++|++++|+.... .. ....+..+.+|++|.+++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAE-----QGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD 75 (251)
T ss_pred CEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH
Confidence 489999999999999999998 899999999973211 00 01123457899999988766554
Q ss_pred ---cCCCeeEEEEecccCC--C----cHHHHHHhHHH----HHHHHHHHHcccCCCcceEEEecCC
Q 015961 94 ---QLTDVTHIFYVTWTNR--S----TEAENCKINGS----MFRNVLRAVIPNAPNLRHVCLQTGT 146 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~----gt~~ll~a~~~~~~~~~~~~~~s~~ 146 (397)
.+|.|+|+++...... + +....+++|+. +++++++++++.+ ..+++++||.
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~ss~ 139 (251)
T PRK07069 76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ--PASIVNISSV 139 (251)
T ss_pred HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CcEEEEecCh
Confidence 4577888876432211 1 23456778888 7777888777543 5677877753
No 216
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.17 E-value=3.8e-10 Score=103.58 Aligned_cols=114 Identities=15% Similarity=0.070 Sum_probs=79.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
|+++||||+|+||.+++++|++ .|++|++++|+.... . .....+.++.+|++|++++.+++.
T Consensus 1 k~vlItGas~giG~~la~~la~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAA-----QGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAA 75 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence 4799999999999999999998 899999999875321 0 011224567899999987765554
Q ss_pred --cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 145 (397)
.+|.|+|+++..... . ++....+++|+.++.++++++... .....+++++||
T Consensus 76 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS 138 (272)
T PRK07832 76 HGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS 138 (272)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence 357788887642111 1 134667899999999999987532 112346776664
No 217
>PRK08589 short chain dehydrogenase; Validated
Probab=99.16 E-value=4.4e-10 Score=103.17 Aligned_cols=157 Identities=12% Similarity=0.000 Sum_probs=99.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
.+|++|||||+|.||.+++++|++ +|++|++++|+.... . ....++.++.+|++|.+++..+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQ-----EGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 457999999999999999999999 899999999972110 0 012357889999999987766554
Q ss_pred --cCCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCCCCC
Q 015961 94 --QLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 163 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 163 (397)
.+|.++|.|+..... .+ ..+..+++|+.++..+++++... ..+-.+++++||...+. +
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------ 147 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA------A------ 147 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC------C------
Confidence 356688887643211 11 23456788999987777765543 11114677766432111 0
Q ss_pred CCCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 164 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 164 ~~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
. +. ...|+. +.+...+. ....|+++..+.|+.|..
T Consensus 148 ~---------~~-~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T 189 (272)
T PRK08589 148 D---------LY-RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIET 189 (272)
T ss_pred C---------CC-CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence 0 00 112543 22222221 134679999999999876
No 218
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.16 E-value=3.1e-10 Score=104.51 Aligned_cols=157 Identities=14% Similarity=0.032 Sum_probs=100.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc-----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+|+++||||+|+||++++++|++ +|++|++++|+.... .. ...++.++++|+.|.+++..++.
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELAR-----AGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999998 899999999975321 00 11357789999999987766554
Q ss_pred --cCCCeeEEEEecccC---------------------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCcc
Q 015961 94 --QLTDVTHIFYVTWTN---------------------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKH 148 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~---------------------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~ 148 (397)
.+|.++|+|+..... .++....+++|+.++..+++++.+. ..+..+++++||...
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~ 164 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA 164 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence 467788887632111 1134567789999987666654332 112356776664322
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 149 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 149 y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
| .+ ...... |+. +.+...+.. ...|+++..++|+.|..+
T Consensus 165 ~-------~~-------------~~~~~~--Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~ 210 (278)
T PRK08277 165 F-------TP-------------LTKVPA--YSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE 210 (278)
T ss_pred c-------CC-------------CCCCch--hHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCc
Confidence 2 10 001111 443 222222221 345799999999999884
No 219
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.16 E-value=2.3e-10 Score=102.67 Aligned_cols=103 Identities=18% Similarity=0.033 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHcc-------C
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQ-------L 95 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~-------~ 95 (397)
|+|++|||||+|.||.+++++|++ +|++|++++|++.... ....++.++.+|++|.+++...+.. +
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLA-----QGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence 678999999999999999999998 8999999999764321 0112467899999999877665533 5
Q ss_pred CCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHcc
Q 015961 96 TDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIP 132 (397)
Q Consensus 96 ~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~ 132 (397)
|.++|+|+..... . ++.+..+++|+.++..+.+++..
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 118 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED 118 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence 6688887642111 1 13456778999998877776654
No 220
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.16 E-value=2.6e-10 Score=103.41 Aligned_cols=114 Identities=15% Similarity=0.064 Sum_probs=80.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------ 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~------ 93 (397)
|++|||||+|+||.+++++|++ .|++|+++.|+.... . .....+.++.+|++|++++.+++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 75 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAK-----DGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF 75 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999998 899999999874321 0 012357789999999998777654
Q ss_pred -cCCCeeEEEEecccC---C---CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961 94 -QLTDVTHIFYVTWTN---R---STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 145 (397)
Q Consensus 94 -~~~~V~h~a~~~~~~---~---~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 145 (397)
.+|.|+|+++..... . ...+..+++|+.++..+++++... .....+++++||
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 137 (254)
T TIGR02415 76 GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAAS 137 (254)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 357788887643211 1 133567889999988777766542 111256676653
No 221
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.16 E-value=5e-10 Score=101.60 Aligned_cols=117 Identities=11% Similarity=0.026 Sum_probs=82.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CC-CCCCceEEEccCCCHHHHHHHHc------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN-ADHLVEYVQCDVSDPEETQAKLS------ 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~-~~~~v~~~~~Dl~d~~~l~~~~~------ 93 (397)
.+|++|||||+|.||.+++++|.+ .|++|++++|..... .. ....+..+++|++|.+++..+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAE-----AGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 358999999999999999999998 899999888754211 00 12356789999999988776664
Q ss_pred -cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCC
Q 015961 94 -QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGT 146 (397)
Q Consensus 94 -~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~ 146 (397)
.+|.++|+|+..... .++....+++|+.++.++++++... ...-.+++++||.
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~ 146 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASM 146 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECch
Confidence 367788887642211 1145667899999999998887543 1112456666643
No 222
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.15 E-value=6.2e-10 Score=101.61 Aligned_cols=156 Identities=13% Similarity=0.065 Sum_probs=99.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHcc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
.+|++|||||+|.||.+++++|++ +|++|++++|+.... .. ...++.++.+|++|++++..+++.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLAR-----AGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 458899999999999999999999 899999999975321 00 123578899999999888776653
Q ss_pred ----CCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.++|.++..... . ++.+..+++|+.+...+.+++... ..+..+++++||...+.
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~------------ 149 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE------------ 149 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC------------
Confidence 56677776532211 1 134567788988766665554432 11235677776432110
Q ss_pred CCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 163 DPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
+ .+. ...|+. .+.++..+ ...|+++..+.|+.|-.
T Consensus 150 --~-------~~~-~~~y~asKaal~~l~~~la~el-~~~gIrVn~v~PG~v~T 192 (263)
T PRK08339 150 --P-------IPN-IALSNVVRISMAGLVRTLAKEL-GPKGITVNGIMPGIIRT 192 (263)
T ss_pred --C-------CCc-chhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCcCcc
Confidence 0 010 011331 33333333 45689999999998865
No 223
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.14 E-value=7e-10 Score=101.33 Aligned_cols=117 Identities=15% Similarity=0.069 Sum_probs=79.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc-
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~- 93 (397)
.++|++|||||+|.||.+++++|++ .|++|++++|+.... . ....++..+.+|++|.+++.++++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLE-----AGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA 80 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence 3568999999999999999999998 899999999975321 0 011356788999999988766554
Q ss_pred ------cCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 ------QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ------~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.++|+|+..... .+ .....+++|+.+...+++++... ..+..+++++||
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 146 (265)
T PRK07062 81 VEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNS 146 (265)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecc
Confidence 356688877642211 01 34556788888876666655332 112346776664
No 224
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.14 E-value=4.4e-10 Score=101.73 Aligned_cols=114 Identities=11% Similarity=0.100 Sum_probs=75.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccC------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQL------ 95 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~------ 95 (397)
|+||||||+|+||++++++|++ +|++|++++|.+.+. .....+++++.+|++|.+++...++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLE-----KGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHh-----cCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 6899999999999999999998 899999999976221 011246789999999998887766542
Q ss_pred ---C--CeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecC
Q 015961 96 ---T--DVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG 145 (397)
Q Consensus 96 ---~--~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~ 145 (397)
+ .++|.++...... +.....+++|+.+...+++++...- ....+++++||
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS 141 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecc
Confidence 1 2445544322111 1345567789888666655543321 11346676664
No 225
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.14 E-value=6.9e-10 Score=103.98 Aligned_cols=121 Identities=11% Similarity=0.072 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
+|++++|||||++.||.+++++|++ +| ++|++++|+.... . .....+.++.+|++|.+++++++.
T Consensus 1 ~~~k~vlITGas~GIG~aia~~L~~-----~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 75 (314)
T TIGR01289 1 QQKPTVIITGASSGLGLYAAKALAA-----TGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQF 75 (314)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHH-----cCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4778999999999999999999998 79 9999999875321 1 012356788999999987766553
Q ss_pred -----cCCCeeEEEEecccC----C---CcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccc
Q 015961 94 -----QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHY 149 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y 149 (397)
.+|.++|.|+..... . +..+..+++|+.++..+.+++... +.+-.+|+.+||...+
T Consensus 76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~ 147 (314)
T TIGR01289 76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN 147 (314)
T ss_pred HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence 356677776642211 1 133556899999987776655432 1113578888876554
No 226
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.14 E-value=5.9e-10 Score=94.79 Aligned_cols=112 Identities=22% Similarity=0.089 Sum_probs=80.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCC----------CCCCceEEEccCCCHHHHHHHHcc-
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWN----------ADHLVEYVQCDVSDPEETQAKLSQ- 94 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~----------~~~~v~~~~~Dl~d~~~l~~~~~~- 94 (397)
++++||||+|+||.+++++|.+ +|+ .|+++.|+...... ...++.++.+|+++.+++...+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~-----~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAE-----RGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI 75 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHH-----hhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4799999999999999999998 675 68888886543210 113566889999998877665543
Q ss_pred ------CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 95 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 95 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
+|.|+|.++...... ++....+++|+.++.++++++.+. +..+++++|+
T Consensus 76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss 136 (180)
T smart00822 76 PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSS 136 (180)
T ss_pred HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEcc
Confidence 467888876432111 134667899999999999999764 3566776664
No 227
>PRK05855 short chain dehydrogenase; Validated
Probab=99.13 E-value=5.3e-10 Score=113.78 Aligned_cols=155 Identities=12% Similarity=0.006 Sum_probs=103.1
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
.+++|||||+|+||++++++|.+ +|++|++++|+.... . ....++.++.+|++|++++.++++.
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAR-----EGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999998 899999999975321 0 0113578899999999887776653
Q ss_pred ---CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccCCCCCC
Q 015961 95 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPY 162 (397)
Q Consensus 95 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 162 (397)
+|.++|+|+...... ++....+++|+.|+.++++++... ...-.+|+++||...|...
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 459 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS---------- 459 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC----------
Confidence 577888877533211 134566789999999988876432 1112467777754333210
Q ss_pred CCCCCCCCCCCCCCCcchhHHHH--------HHHHHhcCCCeeEEEEcCCceee
Q 015961 163 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 163 ~~~~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
+ ....|+..|. ++... ...|++++.++|+.|-.
T Consensus 460 -----------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 460 -----------R-SLPAYATSKAAVLMLSECLRAEL-AAAGIGVTAICPGFVDT 500 (582)
T ss_pred -----------C-CCcHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEEeCCCcc
Confidence 0 0112543322 22222 45689999999998754
No 228
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.13 E-value=5.2e-10 Score=105.33 Aligned_cols=116 Identities=16% Similarity=0.086 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
.+++||||||+|.||.+++++|++ +|++|++++|+.... . .....+.++.+|++|.+++..+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~-----~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFAR-----RGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 357999999999999999999999 899999999975321 0 011356688999999988877653
Q ss_pred ---cCCCeeEEEEecccC--CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 94 ---QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+|.++|+|+..... .+ .....+++|+.++.++.+++... ..+..+++.+||
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS 143 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMIS 143 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 467788887643221 11 33457899999998887776432 111245665553
No 229
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.12 E-value=2.9e-10 Score=103.68 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=76.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~-------~ 94 (397)
+|+++||||+|+||.+++++|++ .|++|++++|+.... . .....+..+.+|+.|.+++.++++ .
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVA-----EGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999 899999999975321 0 012357789999999887766554 4
Q ss_pred CCCeeEEEEeccc--C-CC--------cHHHHHHhHHHHHHHHHHHHccc
Q 015961 95 LTDVTHIFYVTWT--N-RS--------TEAENCKINGSMFRNVLRAVIPN 133 (397)
Q Consensus 95 ~~~V~h~a~~~~~--~-~~--------~~~~~~~~nv~gt~~ll~a~~~~ 133 (397)
+|.++|+|+.... . .+ ..+..+++|+.++.++++++...
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 129 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPA 129 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHH
Confidence 5778888764211 1 01 23467899999999999988654
No 230
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.12 E-value=5.2e-10 Score=115.65 Aligned_cols=159 Identities=11% Similarity=0.066 Sum_probs=105.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
+..+|++|||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|++|.+++.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAE-----AGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 34468999999999999999999998 899999999975321 0 012357889999999998877765
Q ss_pred -----cCCCeeEEEEecccC--------CCcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCC
Q 015961 94 -----QLTDVTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK 158 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~ 158 (397)
.+|.++|+|+..... .++....+++|+.|+.++++++... .....+++++||...|..
T Consensus 443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------- 515 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN------- 515 (657)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC-------
Confidence 467788887643111 0134567899999998887766432 123457887775433211
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhHH-----HHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 159 IKPYDPPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 159 ~~~~~~~~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
. +. ...|+.. .+...+. ....|+.+++++|+.|..
T Consensus 516 -----~---------~~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T 557 (657)
T PRK07201 516 -----A---------PR-FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRT 557 (657)
T ss_pred -----C---------CC-cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcc
Confidence 0 00 1115432 2222211 134689999999999876
No 231
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.11 E-value=1.4e-09 Score=99.05 Aligned_cols=116 Identities=13% Similarity=-0.043 Sum_probs=78.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc--
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
..+|++|||||+|.||.+++++|++ +|++|+++.|+.... . ....++.++.+|++|.+++.+.++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~-----~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 79 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGK-----EKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTA 79 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4568999999999999999999998 899998888854211 0 012356788999999988776654
Q ss_pred -----cCCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHH----cccCCCcceEEEecC
Q 015961 94 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAV----IPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~~~~~~s~ 145 (397)
.+|.++|+++...... +..+..+++|+.++.++++++ .+.+ .-.+++++||
T Consensus 80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS 145 (261)
T PRK08936 80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSS 145 (261)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcc
Confidence 3566888876432211 134456789988876655544 3322 1245666653
No 232
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.11 E-value=5.5e-10 Score=99.36 Aligned_cols=112 Identities=15% Similarity=0.117 Sum_probs=80.1
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHc----cCCCeeEE
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHI 101 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~----~~~~V~h~ 101 (397)
+++||||+|.||+++++.|.+ +|++|++++|+.... .....+++++.+|++|++++.++++ .+|.++|+
T Consensus 2 ~vlItGas~giG~~ia~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRN-----DGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 699999999999999999998 899999999975321 0011246788999999998877765 46778888
Q ss_pred EEeccc---C--------CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961 102 FYVTWT---N--------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 144 (397)
Q Consensus 102 a~~~~~---~--------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 144 (397)
++..+. . .++....+++|+.++.++++++...-..-.+++.+|
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is 130 (223)
T PRK05884 77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV 130 (223)
T ss_pred CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence 753211 0 113456679999999999988765411124566555
No 233
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.11 E-value=8.2e-10 Score=102.64 Aligned_cols=116 Identities=19% Similarity=0.075 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
.+++||||||+|.||.+++++|.+ .|++|++++|+.... ......+..+.+|++|.+++..+++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHA-----RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 458999999999999999999998 899999999975321 1111245566799999988766654
Q ss_pred --cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~ 145 (397)
.+|.|+|.|+..... . +..+..+++|+.++.++++++... ..+..+++.+||
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 467788887653211 1 133567889999999999887643 112346777764
No 234
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.10 E-value=7e-10 Score=101.96 Aligned_cols=101 Identities=20% Similarity=0.162 Sum_probs=76.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC-CCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
|+|.++|||| |+||++++++|. +|++|++++|+.... .. ...++.++.+|++|.+++..+++
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 7789999998 799999999994 589999999975321 00 11357789999999988777664
Q ss_pred --cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHccc
Q 015961 94 --QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN 133 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~ 133 (397)
.+|.++|+|+.. ....+....+++|+.++.++++++...
T Consensus 74 ~g~id~li~nAG~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~ 114 (275)
T PRK06940 74 LGPVTGLVHTAGVS-PSQASPEAILKVDLYGTALVLEEFGKV 114 (275)
T ss_pred cCCCCEEEECCCcC-CchhhHHHHHHHhhHHHHHHHHHHHHH
Confidence 356678876642 223467788999999999999988654
No 235
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.10 E-value=1.6e-09 Score=98.85 Aligned_cols=159 Identities=12% Similarity=-0.004 Sum_probs=101.0
Q ss_pred CCCCEEEEEcCCC-hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHc
Q 015961 24 SYQSVALIVGVTG-IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 24 ~~~~~ILVtGatG-fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
..++++|||||+| -||..+++.|++ +|++|++++|+.... . ....++.++.+|+++++++..+++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALE-----EGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 3468999999998 599999999998 899999998865321 0 111357789999999988776664
Q ss_pred -------cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecCCccccccccccC
Q 015961 94 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 94 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
.+|.++|+++..... . +.....+++|+.++..+++++... ...-.+++.+++. .+
T Consensus 90 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~---------~~ 160 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASV---------LG 160 (262)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCch---------hh
Confidence 357788887642211 1 134556789999999888877543 1112355554431 11
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhH-----HHHHHHHHh--cCCCeeEEEEcCCceeec
Q 015961 158 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~g~~~~ilRp~~v~G~ 209 (397)
. .+. .. ...|+. +.+...+.. ...|+++..++|+.+..+
T Consensus 161 ~-----~~~------~~--~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~ 206 (262)
T PRK07831 161 W-----RAQ------HG--QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHP 206 (262)
T ss_pred c-----CCC------CC--CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCc
Confidence 1 000 01 112443 333332221 346899999999998873
No 236
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.09 E-value=1.2e-09 Score=95.43 Aligned_cols=102 Identities=16% Similarity=0.120 Sum_probs=74.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc---cCCCeeEEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---QLTDVTHIFY 103 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---~~~~V~h~a~ 103 (397)
+++|||||+|.||.+++++|.+ + ++|++++|++. .+++|++|.++++.+++ .+|.++|.++
T Consensus 1 ~~vlItGas~giG~~la~~l~~-----~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSK-----R-HEVITAGRSSG----------DVQVDITDPASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHh-----c-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence 3799999999999999999998 6 78999998642 46899999998888776 4566777765
Q ss_pred ecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961 104 VTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 144 (397)
Q Consensus 104 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 144 (397)
...... ++....+++|+.++.++++++...-.+-..++++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 422111 13455678999999999998865421224566555
No 237
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1.9e-09 Score=101.31 Aligned_cols=159 Identities=20% Similarity=0.189 Sum_probs=95.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC----CCCCceEEEccCCCHHHHHHHHccCCC-
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN----ADHLVEYVQCDVSDPEETQAKLSQLTD- 97 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~----~~~~v~~~~~Dl~d~~~l~~~~~~~~~- 97 (397)
...+|||+||||.+|+.+++.|++ +|+.|++++|+.... .. .+.....+..|.....+....+.....
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llk-----rgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLK-----RGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHH-----CCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence 346899999999999999999999 899999999986543 11 234455566665555443333322221
Q ss_pred --eeEEEEecccCCC-cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCC
Q 015961 98 --VTHIFYVTWTNRS-TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 174 (397)
Q Consensus 98 --V~h~a~~~~~~~~-~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~ 174 (397)
++...+....+.. +-..-..+...|+.|+++||+.++ ++|++++++ +|... . +.+...
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG--vk~~vlv~s----------i~~~~-----~--~~~~~~ 213 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG--VKRVVLVGS----------IGGTK-----F--NQPPNI 213 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC--CceEEEEEe----------ecCcc-----c--CCCchh
Confidence 1222211111111 112334688899999999998765 899998863 22110 0 001000
Q ss_pred CC-Ccch-hHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 175 AP-NFYY-TLEDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 175 ~~-~~~y-~~e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
.. ...+ .....+..+. ++.|++++|+||+...-
T Consensus 214 ~~~~~~~~~~k~~~e~~~-~~Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 214 LLLNGLVLKAKLKAEKFL-QDSGLPYTIIRPGGLEQ 248 (411)
T ss_pred hhhhhhhhHHHHhHHHHH-HhcCCCcEEEecccccc
Confidence 00 1111 2234444444 78899999999987665
No 238
>PRK06484 short chain dehydrogenase; Validated
Probab=99.08 E-value=1e-09 Score=110.32 Aligned_cols=159 Identities=13% Similarity=0.015 Sum_probs=104.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHcc----
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLSQ---- 94 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~~---- 94 (397)
...+|++|||||+|.||.+++++|.+ +|++|++++|+.... . .....+..+.+|++|++++.++++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 340 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAA-----AGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR 340 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH
Confidence 34578999999999999999999999 899999999975321 0 0113456789999999887766643
Q ss_pred ---CCCeeEEEEeccc--C-C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 95 ---LTDVTHIFYVTWT--N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 95 ---~~~V~h~a~~~~~--~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
+|.++|.|+.... . . +..+..+++|+.++.++++++...-.+-.+|+++||...+ .+ .
T Consensus 341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~------~ 408 (520)
T PRK06484 341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL------LA------L 408 (520)
T ss_pred cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc------CC------C
Confidence 5678888764311 1 1 1345678999999999988876642223467766642211 00 0
Q ss_pred CCCCCCCCCCCCCcchhH-----HHHHHHHH--hcCCCeeEEEEcCCceee
Q 015961 165 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 165 ~~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~g~~~~ilRp~~v~G 208 (397)
+ . ...|+. +.+..... ....|+++..+.|+.|..
T Consensus 409 ------~--~--~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t 449 (520)
T PRK06484 409 ------P--P--RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIET 449 (520)
T ss_pred ------C--C--CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccC
Confidence 0 1 112543 22222221 134689999999999977
No 239
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.07 E-value=6.8e-10 Score=101.33 Aligned_cols=116 Identities=17% Similarity=0.067 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C--CCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
.+|++|||||+|+||.+++++|++ .|++|++++|++... . ....++.++.+|++|.+++..+++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLA-----EGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFG 79 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence 357999999999999999999998 899999999975321 0 012357789999999987766654
Q ss_pred cCCCeeEEEEeccc--CC-C-c-------HHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecC
Q 015961 94 QLTDVTHIFYVTWT--NR-S-T-------EAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG 145 (397)
Q Consensus 94 ~~~~V~h~a~~~~~--~~-~-~-------~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~ 145 (397)
.+|.++|.|+.... .. + + .+..+++|+.++..+++++...- ..-.++++++|
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS 143 (263)
T PRK06200 80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLS 143 (263)
T ss_pred CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECC
Confidence 35778888764221 11 1 1 33457899999988888776531 11235666654
No 240
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.06 E-value=7.6e-10 Score=99.78 Aligned_cols=104 Identities=17% Similarity=0.159 Sum_probs=80.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
+++++|||||+|+||++++++|++ +|++|++++|+..... ........+.+|++|.+++.+.+..+|.++|+|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnA 87 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRA-----KGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNH 87 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence 357999999999999999999998 8999999998752211 011123578899999999988888899999998
Q ss_pred EecccCC---CcHHHHHHhHHHHHHHHHHHHccc
Q 015961 103 YVTWTNR---STEAENCKINGSMFRNVLRAVIPN 133 (397)
Q Consensus 103 ~~~~~~~---~~~~~~~~~nv~gt~~ll~a~~~~ 133 (397)
+...... ++....+++|+.++.++++++...
T Consensus 88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 88 GINPGGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 7532211 245677899999999999987653
No 241
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.04 E-value=9.6e-10 Score=98.77 Aligned_cols=112 Identities=16% Similarity=0.126 Sum_probs=77.2
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHcc------
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ------ 94 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~~------ 94 (397)
||||||+|+||.+++++|.+ +|++|++++|+.... . ....++.++.+|++|.+++..+++.
T Consensus 1 vlItGas~giG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAA-----DGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHG 75 (239)
T ss_pred CEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999998 899999998764221 0 0123588999999999887666543
Q ss_pred -CCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEecC
Q 015961 95 -LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTG 145 (397)
Q Consensus 95 -~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~ 145 (397)
.|.++|.++..... .++....+++|+.++.++++++. .. ..+..+++++||
T Consensus 76 ~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS 136 (239)
T TIGR01831 76 AYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLAS 136 (239)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 35566765532111 11456678999999999988763 11 112356776664
No 242
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.03 E-value=2.1e-09 Score=87.75 Aligned_cols=151 Identities=18% Similarity=0.229 Sum_probs=102.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEEecc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 106 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~~~~ 106 (397)
+..+|.||||-.|+-|++++++.++.+ +|+++.|+..........+.....|....+++...+++.|..|.+-+.+.
T Consensus 19 ~s~fvlGAtG~~G~~llk~~~E~~~FS---KV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR 95 (238)
T KOG4039|consen 19 MSGFVLGATGLCGGGLLKHAQEAPQFS---KVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR 95 (238)
T ss_pred cceEEEeccccccHHHHHHHHhcccce---eEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence 689999999999999999999976655 89999998644333446778889999888888889999987666544332
Q ss_pred cCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCCcchh-----
Q 015961 107 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT----- 181 (397)
Q Consensus 107 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~~~y~----- 181 (397)
... ..+.++++..+-...+.+++++. .+++|+++||...-.| +++.|-
T Consensus 96 gka-GadgfykvDhDyvl~~A~~AKe~--Gck~fvLvSS~GAd~s------------------------SrFlY~k~KGE 148 (238)
T KOG4039|consen 96 GKA-GADGFYKVDHDYVLQLAQAAKEK--GCKTFVLVSSAGADPS------------------------SRFLYMKMKGE 148 (238)
T ss_pred ccc-ccCceEeechHHHHHHHHHHHhC--CCeEEEEEeccCCCcc------------------------cceeeeeccch
Confidence 211 23334444444444566777764 4899999985432222 233333
Q ss_pred HHHHHHHHHhcCCCe-eEEEEcCCceeeccCC
Q 015961 182 LEDILFEEVEKKEEL-SWSVHRPDTIFGFSPY 212 (397)
Q Consensus 182 ~e~~l~~~~~~~~g~-~~~ilRp~~v~G~~~~ 212 (397)
.|+-+.+ ..+ .++|+||+.+.|..+.
T Consensus 149 vE~~v~e-----L~F~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 149 VERDVIE-----LDFKHIIILRPGPLLGERTE 175 (238)
T ss_pred hhhhhhh-----ccccEEEEecCcceeccccc
Confidence 2444443 233 6899999999995443
No 243
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.03 E-value=3.7e-09 Score=96.29 Aligned_cols=116 Identities=6% Similarity=-0.061 Sum_probs=76.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceEEEccCCCHHHHHHHHcc-
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~l~~~~~~- 94 (397)
++|+||||||++.||.+++++|++ .|++|+++.|+.... . ....++.++.+|++|++++.+++..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQ-----SGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 468999999999999999999999 899998887643211 0 0123577899999999877666543
Q ss_pred ------CCCeeEEEEeccc-------CC-----CcHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 95 ------LTDVTHIFYVTWT-------NR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 95 ------~~~V~h~a~~~~~-------~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
+|.++|.|+.... .. ......+++|+.+...+.+++... ..+-.+++++||
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 152 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSS 152 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEec
Confidence 5667887753210 00 123445677887766555544332 112346777664
No 244
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.02 E-value=1.1e-09 Score=104.90 Aligned_cols=103 Identities=12% Similarity=0.104 Sum_probs=80.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-CCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH 100 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h 100 (397)
++|+|+||||+|+||++++++|.+ +|++|++++|++... . .....+..+.+|++|.+++.+.+.++|.++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~-----~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQ-----QGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 468999999999999999999998 899999999875321 0 0112466889999999999999999998899
Q ss_pred EEEecccCCC---cHHHHHHhHHHHHHHHHHHHcc
Q 015961 101 IFYVTWTNRS---TEAENCKINGSMFRNVLRAVIP 132 (397)
Q Consensus 101 ~a~~~~~~~~---~~~~~~~~nv~gt~~ll~a~~~ 132 (397)
.|+....... +....+++|+.|+.++++++..
T Consensus 252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8764322111 4467789999999999998754
No 245
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.02 E-value=2.7e-09 Score=99.63 Aligned_cols=103 Identities=15% Similarity=-0.029 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
.+|++|||||+|+||.+++++|++ +|++|++.+|..... . ....++.++.+|++|.+++..+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~-----~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLAR-----LGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 458999999999999999999999 899999988753211 0 012357789999999987766554
Q ss_pred ---cCCCeeEEEEecccC----C--CcHHHHHHhHHHHHHHHHHHHcc
Q 015961 94 ---QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIP 132 (397)
Q Consensus 94 ---~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~ 132 (397)
.+|.++|.|+..... . .+....+++|+.++.++++++..
T Consensus 86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~ 133 (306)
T PRK07792 86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA 133 (306)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 467788887653221 1 14566789999999999887753
No 246
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.02 E-value=1.3e-08 Score=91.11 Aligned_cols=114 Identities=19% Similarity=0.157 Sum_probs=76.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHH---ccCCCeeEEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL---SQLTDVTHIFY 103 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~---~~~~~V~h~a~ 103 (397)
|+|+||||+|+||++++++|++.. .++.|+...|..... ...+++.++++|++|.++++... .++|.|+|+++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~---~~~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG 76 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERY---PDATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVG 76 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhC---CCCEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence 479999999999999999999821 145676666654332 12357889999999998766544 45677888877
Q ss_pred ecccC----C----C----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEec
Q 015961 104 VTWTN----R----S----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQT 144 (397)
Q Consensus 104 ~~~~~----~----~----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s 144 (397)
..... . . .....+++|+.++..+.+++...- .+..+++.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~is 131 (235)
T PRK09009 77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVIS 131 (235)
T ss_pred cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEe
Confidence 54311 0 0 123567899999888877765531 1224555554
No 247
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.01 E-value=3.3e-09 Score=104.54 Aligned_cols=118 Identities=14% Similarity=0.066 Sum_probs=83.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
+..++++|||||+|.||..++++|.+ +|++|++++|+.... ....-+..++.+|++|.+++..++.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~-----~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLAR-----DGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 34568999999999999999999998 899999998853221 0011234688999999987766554
Q ss_pred --cCCCeeEEEEecccC------CCcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 145 (397)
.+|.|+|+++..... .+..+..+++|+.++.++.+++.... .+-.+|+++||
T Consensus 282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 467788987643211 11345678899999999999887631 12256776664
No 248
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.97 E-value=5.9e-09 Score=95.39 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=70.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-------CC--CCCCceEEEccCCCHHHH----HHHH-
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEET----QAKL- 92 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~l----~~~~- 92 (397)
+.++||||+|+||.+++++|++ +|++|+++.|+.... +. ....+.++.+|++|.+++ ++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~ 76 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQ-----EGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIID 76 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHh-----CCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHH
Confidence 4799999999999999999999 899999987653211 10 112455789999998644 2222
Q ss_pred ------ccCCCeeEEEEecccC----CC-------------cHHHHHHhHHHHHHHHHHHHcc
Q 015961 93 ------SQLTDVTHIFYVTWTN----RS-------------TEAENCKINGSMFRNVLRAVIP 132 (397)
Q Consensus 93 ------~~~~~V~h~a~~~~~~----~~-------------~~~~~~~~nv~gt~~ll~a~~~ 132 (397)
..+|.|+|+|+..... .+ .....+++|+.++..+++++..
T Consensus 77 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 77 ACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred HHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3467788887642211 01 1345689999999988887654
No 249
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.97 E-value=7.3e-09 Score=97.19 Aligned_cols=116 Identities=22% Similarity=0.186 Sum_probs=78.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCC--HHH---HHH
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSD--PEE---TQA 90 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d--~~~---l~~ 90 (397)
.++.++||||||.||.+++++|.+ +|++|++++|++... . .....+..+.+|+++ .+. +.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~-----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~ 126 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLAR-----KGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE 126 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH
Confidence 468999999999999999999998 899999999976421 0 011246678899985 232 334
Q ss_pred HHccCC--CeeEEEEecccC----CC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecC
Q 015961 91 KLSQLT--DVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 145 (397)
Q Consensus 91 ~~~~~~--~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 145 (397)
.+.+.| .++|.|+..... .+ .....+++|+.|+.++.+++... ..+..+++.+||
T Consensus 127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS 193 (320)
T PLN02780 127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS 193 (320)
T ss_pred HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 444444 578887653211 11 23457899999999988877543 122456777764
No 250
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.96 E-value=7.2e-09 Score=94.36 Aligned_cols=113 Identities=11% Similarity=-0.022 Sum_probs=74.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHc-------
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------- 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~------- 93 (397)
++||||||+|.||+.++++|++ +|++|++++|++... .....++.++.+|++|.+++.++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLK-----KGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999998 899999999975321 1111357789999999988776664
Q ss_pred cCCCeeEEEEecccC----CC----cHHHHHHhHHHHHHHHHHH----HcccCCCcceEEEecC
Q 015961 94 QLTDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRA----VIPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a----~~~~~~~~~~~~~~s~ 145 (397)
.+|.++|.|+..... .+ +....+.+|+.++..+..+ ..+. ..-.+++++||
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~g~iv~isS 138 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK-KMKGVLVYLSS 138 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc-CCCCEEEEEeC
Confidence 456678877642111 11 2233456777765444333 2211 12346776664
No 251
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.94 E-value=4.8e-09 Score=89.36 Aligned_cols=157 Identities=17% Similarity=0.134 Sum_probs=102.5
Q ss_pred CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC--CCCCceEEEccCCCHHHHHHHHccCCC
Q 015961 20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQLTD 97 (397)
Q Consensus 20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 97 (397)
++.+-...+.++.|+.||.|+++++.-.. .++.|-.+.|+..+... ....+.+.++|.....-+...+.+.-.
T Consensus 46 ~~~dve~e~tlvlggnpfsgs~vlk~A~~-----vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~ 120 (283)
T KOG4288|consen 46 DKQDVEVEWTLVLGGNPFSGSEVLKNATN-----VVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTF 120 (283)
T ss_pred chhhhhHHHHhhhcCCCcchHHHHHHHHh-----hceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcc
Confidence 33333336789999999999999999988 89999999998544321 124678899998877666677776665
Q ss_pred eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 015961 98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN 177 (397)
Q Consensus 98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~~E~~p~~~~~~ 177 (397)
++-+++ ...+...+.++|-....+-.+++.+.+ +++|+|+|.. .||- . |..| .
T Consensus 121 v~e~~g----gfgn~~~m~~ing~ani~a~kaa~~~g--v~~fvyISa~--------d~~~-----~------~~i~--r 173 (283)
T KOG4288|consen 121 VYEMMG----GFGNIILMDRINGTANINAVKAAAKAG--VPRFVYISAH--------DFGL-----P------PLIP--R 173 (283)
T ss_pred cHHHhc----CccchHHHHHhccHhhHHHHHHHHHcC--CceEEEEEhh--------hcCC-----C------Cccc--h
Confidence 655533 123445566677777777777777654 8899988721 2221 0 1111 2
Q ss_pred cchh-HHHHHHHHHhcCCCeeEEEEcCCceeec
Q 015961 178 FYYT-LEDILFEEVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 178 ~~y~-~e~~l~~~~~~~~g~~~~ilRp~~v~G~ 209 (397)
.|+. ....-.|.. +.++++-++|||+.|||.
T Consensus 174 GY~~gKR~AE~Ell-~~~~~rgiilRPGFiyg~ 205 (283)
T KOG4288|consen 174 GYIEGKREAEAELL-KKFRFRGIILRPGFIYGT 205 (283)
T ss_pred hhhccchHHHHHHH-HhcCCCceeeccceeecc
Confidence 2333 222222222 456788999999999995
No 252
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.92 E-value=1.2e-08 Score=92.43 Aligned_cols=115 Identities=15% Similarity=0.092 Sum_probs=78.7
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHc-----
Q 015961 25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
.+|++|||||+ +-||..++++|++ .|++|++..|+.... ......+.++++|++|+++++++++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKD-----QGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 45899999999 7999999999998 899999998863210 0112357789999999987765543
Q ss_pred --cCCCeeEEEEeccc-----C-C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961 94 --QLTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 144 (397)
Q Consensus 94 --~~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 144 (397)
.+|.++|.|+.... + . ++.+..+++|+.++..+++++...-.+-.+++.+|
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~is 143 (252)
T PRK06079 81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLT 143 (252)
T ss_pred hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEe
Confidence 35667777764321 0 1 13455678999998888877765311123555554
No 253
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.92 E-value=2.8e-08 Score=90.41 Aligned_cols=114 Identities=15% Similarity=0.065 Sum_probs=79.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHcc---
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ--- 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~~--- 94 (397)
+|+||||||+|.||.++++.|++ .|++|++++|+.... .. ...++.++.+|++|.+++..+++.
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAA-----EGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 57999999999999999999998 899999999975321 00 123577899999999988776654
Q ss_pred CCCeeEEEEeccc--CCC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 015961 95 LTDVTHIFYVTWT--NRS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT 144 (397)
Q Consensus 95 ~~~V~h~a~~~~~--~~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s 144 (397)
+|.++|+++.... ..+ +....+++|+.+..++.+++... ..+-.+++++|
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVI 139 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 5557777653211 011 34566789999998888876432 11123566555
No 254
>PRK06484 short chain dehydrogenase; Validated
Probab=98.89 E-value=1.4e-08 Score=102.08 Aligned_cols=116 Identities=16% Similarity=0.053 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC--CCCCceEEEccCCCHHHHHHHHcc------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLSQ------ 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~l~~~~~~------ 94 (397)
.+|++|||||++.||..++++|.+ .|++|++++|+.... .. ...++.++.+|++|++++.++++.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFAR-----AGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 467999999999999999999999 899999999975431 00 113466799999999887666543
Q ss_pred -CCCeeEEEEeccc------CC--CcHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecC
Q 015961 95 -LTDVTHIFYVTWT------NR--STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG 145 (397)
Q Consensus 95 -~~~V~h~a~~~~~------~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~ 145 (397)
+|.++|.|+.... .. ++....+++|+.++..+++++...- ..-.+++.+||
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS 141 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS 141 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 5667887764211 01 1356678999999999888876541 11126666664
No 255
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.87 E-value=3.5e-08 Score=89.64 Aligned_cols=117 Identities=10% Similarity=0.042 Sum_probs=75.9
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCC---------C----C----C-CCCCCceEEEccCC
Q 015961 24 SYQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPK---------P----N----W-NADHLVEYVQCDVS 83 (397)
Q Consensus 24 ~~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~---------~----~----~-~~~~~v~~~~~Dl~ 83 (397)
..+|+||||||+| .||.+++++|++ .|++|+++.|... . . . .....+.++.+|++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~-----~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~ 78 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAE-----AGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT 78 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence 3468999999995 799999999999 8999988754210 0 0 0 01124668899999
Q ss_pred CHHHHHHHHcc-------CCCeeEEEEecccC---CC---cHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecC
Q 015961 84 DPEETQAKLSQ-------LTDVTHIFYVTWTN---RS---TEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG 145 (397)
Q Consensus 84 d~~~l~~~~~~-------~~~V~h~a~~~~~~---~~---~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~ 145 (397)
|.+++.+++.. .|.++|.|+..... .. .....+++|+.+...+..++... . ..-.+++++||
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 155 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTS 155 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 99887666543 45577776542211 11 34456889999988776544332 1 12346776664
No 256
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.85 E-value=8e-08 Score=86.59 Aligned_cols=118 Identities=21% Similarity=0.156 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHH---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL--- 92 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~--- 92 (397)
.+|.|+|||||.-||.+++.+|.+ .|.+++.+.|+.... .....++.++++|++|.+++..++
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~-----~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAK-----RGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh-----CCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 358899999999999999999999 899888787764321 111125899999999999887654
Q ss_pred ----ccCCCeeEEEEecccCC-C-----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecCCc
Q 015961 93 ----SQLTDVTHIFYVTWTNR-S-----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTK 147 (397)
Q Consensus 93 ----~~~~~V~h~a~~~~~~~-~-----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~ 147 (397)
.++|..++-|+.+.... + +....+++|+.|+..+..++..+- .+-.||+.+||+.
T Consensus 86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia 152 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA 152 (282)
T ss_pred HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence 33454444444332111 1 345578999999988888776541 1236777777543
No 257
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.84 E-value=2.6e-08 Score=92.04 Aligned_cols=103 Identities=12% Similarity=-0.028 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC---------CCC------C-CCCCCceEEEccCCCHHH
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---------KPN------W-NADHLVEYVQCDVSDPEE 87 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~---------~~~------~-~~~~~v~~~~~Dl~d~~~ 87 (397)
.++|++|||||++.||.+++++|++ .|++|++++|+. ... . ....++.++.+|++|.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~-----~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 78 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAA-----EGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDG 78 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHH
Confidence 3468999999999999999999998 899999888754 110 0 011346688999999987
Q ss_pred HHHHHc-------cCCCeeEEEEecccC--C----CcHHHHHHhHHHHHHHHHHHHc
Q 015961 88 TQAKLS-------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI 131 (397)
Q Consensus 88 l~~~~~-------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~ 131 (397)
+.++++ .+|.++|.|+..... . +.....+++|+.++..+++++.
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 135 (286)
T PRK07791 79 AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA 135 (286)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 766553 356677776643211 1 1456678999999988877664
No 258
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.84 E-value=6.8e-08 Score=87.81 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=73.3
Q ss_pred CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C--CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W--NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~--~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
.+|+++|||| ++-||.+++++|++ +|++|++++|+.... . .....+.++.+|++|+++++++++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQE-----QGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHH-----CCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 4579999999 89999999999998 899999998753111 0 011246789999999987766543
Q ss_pred ----cCCCeeEEEEeccc-----C--CC---cHHHHHHhHHHHHHHHHHHHccc
Q 015961 94 ----QLTDVTHIFYVTWT-----N--RS---TEAENCKINGSMFRNVLRAVIPN 133 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~-----~--~~---~~~~~~~~nv~gt~~ll~a~~~~ 133 (397)
.+|.++|.|+.... . .. .....+++|+.++..+.+++...
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 134 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPL 134 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 35667777764311 0 11 23446789999988887776543
No 259
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=1.2e-07 Score=86.30 Aligned_cols=116 Identities=15% Similarity=0.046 Sum_probs=77.6
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceEEEccCCCHHHHHHHHc-
Q 015961 25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS- 93 (397)
Q Consensus 25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~l~~~~~- 93 (397)
.+|.++||||+ +-||.+++++|++ .|++|+++.|+.... .....++.++.+|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHN-----AGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 45899999997 8999999999999 899999887753211 0012357788999999987766553
Q ss_pred ------cCCCeeEEEEeccc-----C-CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 94 ------QLTDVTHIFYVTWT-----N-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 ------~~~~V~h~a~~~~~-----~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
.+|.++|+|+.... . .+ .....+++|+.++..+.+++...-.+-.+++.+||
T Consensus 81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS 148 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTY 148 (257)
T ss_pred HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcc
Confidence 35667777664321 0 11 23445688999988777776553111235666653
No 260
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.81 E-value=5.7e-08 Score=88.42 Aligned_cols=115 Identities=14% Similarity=0.070 Sum_probs=78.1
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
.+|.+|||||+ +-||.+++++|++ +|++|++.+|+.... . .....+.++.+|++|.+++.++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRA-----LGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----cCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence 35899999998 5999999999998 899999998864321 0 011234578999999987766543
Q ss_pred ----cCCCeeEEEEeccc-----C--C---CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961 94 ----QLTDVTHIFYVTWT-----N--R---STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 144 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~-----~--~---~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 144 (397)
.+|.++|.|+.... . . ++.+..+++|+.++.++++++...-.+-.+++.+|
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~is 148 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMS 148 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 35667887764221 0 0 13456789999999998887754311113455554
No 261
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=5.4e-08 Score=89.24 Aligned_cols=156 Identities=13% Similarity=0.039 Sum_probs=96.4
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
.+|.+|||||++ -||..++++|++ .|++|++..|+.... . ........+.+|++|.+++.++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAA-----QGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHh-----CCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHH
Confidence 457899999997 899999999999 899999988863210 0 011123468999999987766553
Q ss_pred ----cCCCeeEEEEeccc-----C---C--CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCC
Q 015961 94 ----QLTDVTHIFYVTWT-----N---R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~-----~---~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
.+|.++|.|+.... . . ++.+..+++|+.++.++++++...-.+-.+++.+||.. +.
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~---------~~- 150 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG---------ST- 150 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC---------cc-
Confidence 35667777764321 0 0 13455678999999888877654311113455554311 10
Q ss_pred CCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
.+ . |. ...|+. .+.++..+ ...|+++..+.|+.|-.
T Consensus 151 ----~~----~---~~-~~~Y~asKaAl~~l~r~la~el-~~~gIrVn~v~PG~i~T 194 (271)
T PRK06505 151 ----RV----M---PN-YNVMGVAKAALEASVRYLAADY-GPQGIRVNAISAGPVRT 194 (271)
T ss_pred ----cc----C---Cc-cchhhhhHHHHHHHHHHHHHHH-hhcCeEEEEEecCCccc
Confidence 00 0 10 011432 33333333 45689999999998865
No 262
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.80 E-value=7.5e-08 Score=87.61 Aligned_cols=116 Identities=14% Similarity=0.108 Sum_probs=78.0
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCceEEEccCCCHHHHHHHHc
Q 015961 25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
++|.+|||||+ +-||..++++|.+ .|++|++..|+.... .. ....+.++.+|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHA-----AGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence 46899999986 7999999999998 899998876643210 00 11235688999999988766553
Q ss_pred -------cCCCeeEEEEeccc-----CC-----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 94 -------QLTDVTHIFYVTWT-----NR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 -------~~~~V~h~a~~~~~-----~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
.+|.++|.|+.... .. +..+..+++|+.++..+.+++...-.+-.+++++||
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS 148 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTY 148 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 35667787764321 11 133567789999998888876543111245666653
No 263
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.78 E-value=1.1e-07 Score=87.32 Aligned_cols=115 Identities=16% Similarity=0.059 Sum_probs=77.7
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCceEEEccCCCHHHHHHHHcc--
Q 015961 25 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 25 ~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
.+|++|||||+ +-||..++++|++ +|++|++..|+.. .. .. .......+++|++|+++++++++.
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~-----~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRA-----AGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHH
Confidence 45899999997 8999999999999 8999988877521 10 00 112345789999999887665543
Q ss_pred -----CCCeeEEEEeccc-----C-----CCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961 95 -----LTDVTHIFYVTWT-----N-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 144 (397)
Q Consensus 95 -----~~~V~h~a~~~~~-----~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 144 (397)
+|.++|.|+.... . .+.....+++|+.++..+++++...-.+-.+++.+|
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~is 148 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLT 148 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 5667777664321 0 013456779999999999887765421124555555
No 264
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.76 E-value=1.4e-07 Score=86.09 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=75.6
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCC-C----C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961 25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKP-N----W-NADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~-~----~-~~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
.+|++|||||++ -||.++++.|++ +|++|++..|+... . . ...+.+..+.+|++|+++++.+++.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~-----~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 79 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELG 79 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHH-----CCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHH
Confidence 357899999985 899999999999 89999988876310 0 1 0113456789999999887766532
Q ss_pred -----CCCeeEEEEecccCC-----------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961 95 -----LTDVTHIFYVTWTNR-----------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 144 (397)
Q Consensus 95 -----~~~V~h~a~~~~~~~-----------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 144 (397)
+|.++|.|+...... +..+..+++|+.+...+.+++...-..-.+++.+|
T Consensus 80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~is 145 (262)
T PRK07984 80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 145 (262)
T ss_pred hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEe
Confidence 566777776422100 12345678899988777776643211113455555
No 265
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.75 E-value=1.3e-07 Score=86.31 Aligned_cols=115 Identities=13% Similarity=0.062 Sum_probs=74.7
Q ss_pred CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
++|++||||| ++-||.+++++|++ +|++|++..|..... . ........+++|++|+++++.++.
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACRE-----QGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence 4579999997 67999999999998 899998877642110 1 011234578999999988766553
Q ss_pred ----cCCCeeEEEEecccC-------CC----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEec
Q 015961 94 ----QLTDVTHIFYVTWTN-------RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQT 144 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~-------~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s 144 (397)
.+|.++|.|+..... .+ ..+..+++|+.++..+.+++... ..+-.+++.+|
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~is 146 (261)
T PRK08690 80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALS 146 (261)
T ss_pred HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEc
Confidence 366688887653210 11 22345678998887777765442 11113566555
No 266
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.75 E-value=1.5e-07 Score=85.70 Aligned_cols=115 Identities=14% Similarity=0.084 Sum_probs=76.2
Q ss_pred CCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
++|++||||| ++-||.+++++|++ .|++|++..|... .. .. .......+.+|++|++++..+++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKR-----EGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHH-----CCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHH
Confidence 4589999996 67999999999998 8999988765421 00 00 11223468999999988766653
Q ss_pred ----cCCCeeEEEEecccC---------CC--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 015961 94 ----QLTDVTHIFYVTWTN---------RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 144 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~---------~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 144 (397)
.+|.++|.|+..... .+ +.+..+++|+.++..+.+++...-.+-.+++.+|
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~is 145 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 145 (260)
T ss_pred HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Confidence 356677777643210 01 3345678999999888887765421124566655
No 267
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.73 E-value=3.4e-07 Score=85.35 Aligned_cols=116 Identities=19% Similarity=0.054 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC---------C-------CC-CCCCceEEEccCCCHHH
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---------N-------WN-ADHLVEYVQCDVSDPEE 87 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~---------~-------~~-~~~~v~~~~~Dl~d~~~ 87 (397)
.+|.+|||||++.||.+++++|++ .|++|++++|+... . .. ....+.++++|++|+++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGA-----AGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ 81 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 358999999999999999999998 89999999986321 0 00 01245678999999987
Q ss_pred HHHHHc-------cCCCeeEEE-Eecc-----cCC-----CcHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecC
Q 015961 88 TQAKLS-------QLTDVTHIF-YVTW-----TNR-----STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 145 (397)
Q Consensus 88 l~~~~~-------~~~~V~h~a-~~~~-----~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 145 (397)
++.+++ .+|.++|.| +... ... +.....+++|+.++..+.+++...- ..-.+|+.+||
T Consensus 82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS 159 (305)
T PRK08303 82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITD 159 (305)
T ss_pred HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECC
Confidence 766553 356677766 3210 000 1234567889998877777665431 11245666653
No 268
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.73 E-value=1.1e-07 Score=87.27 Aligned_cols=114 Identities=15% Similarity=0.031 Sum_probs=76.7
Q ss_pred CCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--C---C-CC-CCCceEEEccCCCHHHHHHHHc---
Q 015961 26 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N---W-NA-DHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 26 ~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~---~-~~-~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
+|.+|||||+ +-||..+++.|++ .|++|++..|+... . . .. ... ..+.+|++|.+++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~-----~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFE-----QGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 5899999997 7999999999999 89999998886310 0 0 00 112 578999999987766553
Q ss_pred ----cCCCeeEEEEeccc-----C-C----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 94 ----QLTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
.+|.++|.|+.... . . +..+..+++|+.++..+.+++...-..-.+++.+||
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS 144 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY 144 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence 35667777664211 0 1 134567899999998888776653111135665553
No 269
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.72 E-value=1e-07 Score=86.57 Aligned_cols=117 Identities=15% Similarity=0.004 Sum_probs=76.1
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceEEEccCCCHHHHHHHHccC---
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLSQL--- 95 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~l~~~~~~~--- 95 (397)
.+|||||+|.||.+++++|.+.... .|++|+++.|+.... . .....+.++.+|++|.+++.++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKS-PGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhcc-CCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 5899999999999999999841000 488999999975321 0 01235778999999998876655432
Q ss_pred --------CCeeEEEEecccC----C-----CcHHHHHHhHHHHHHHHHHHHcccC----CCcceEEEecC
Q 015961 96 --------TDVTHIFYVTWTN----R-----STEAENCKINGSMFRNVLRAVIPNA----PNLRHVCLQTG 145 (397)
Q Consensus 96 --------~~V~h~a~~~~~~----~-----~~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~~~~~s~ 145 (397)
+.++|.|+..... . +.....+++|+.++..+.+++...- ..-.+++++||
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS 151 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISS 151 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECC
Confidence 2477776542110 1 1235678999999877776664431 11246776664
No 270
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.69 E-value=3.8e-07 Score=81.31 Aligned_cols=101 Identities=8% Similarity=-0.055 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~---- 93 (397)
++|+++||||++-||..++++|.+ +|++|+++.|+.... . ....++..+.+|+.|++++.++++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~-----~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFAR-----LGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQ 78 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence 458999999999999999999999 899999999875421 0 012346678899999987765542
Q ss_pred ----cCCCeeEEEEecccC---CC----cHHHHHHhHHHHHHHHHHHH
Q 015961 94 ----QLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAV 130 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~ 130 (397)
.+|.++|.++..... .+ .....+++|+.++-.++.++
T Consensus 79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (227)
T PRK08862 79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVA 126 (227)
T ss_pred HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 456677776421111 11 22335567777766655544
No 271
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.68 E-value=1.3e-07 Score=88.46 Aligned_cols=115 Identities=15% Similarity=0.126 Sum_probs=78.7
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCce------EEEccCCCHHHHHHHHccCCCe
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVE------YVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~------~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
.+|+||||+|++|++++..|+..+... ++.+|+++++.+..........+ ....|+....++.+.++++|.|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 479999999999999999998732221 24589999986532111100111 1123444455677889999999
Q ss_pred eEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 015961 99 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVC 141 (397)
Q Consensus 99 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~ 141 (397)
+|+|+.......+..+.++.|+.-.+.+.+.+.++. +....++
T Consensus 83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiiv 126 (325)
T cd01336 83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLV 126 (325)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 999886544444678899999999999999888874 3444333
No 272
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.68 E-value=3.2e-07 Score=83.53 Aligned_cols=116 Identities=9% Similarity=0.002 Sum_probs=75.6
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCceEEEccCCCHHHHHHHHc---
Q 015961 25 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 25 ~~~~ILVtGatG--fiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
.+|.+|||||++ -||.+++++|.+ +|++|++..|+.... .. ......++++|++|+++++++++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~-----~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKK-----HGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHH-----cCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence 457899999997 799999999998 899999888763110 10 11122357899999988766553
Q ss_pred ----cCCCeeEEEEeccc-----C-CC----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 94 ----QLTDVTHIFYVTWT-----N-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~-----~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
.+|.++|.++.... . .+ +....+++|+.++..+++++...-.+-.+++.+||
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS 147 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTY 147 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEec
Confidence 35666776553211 0 11 34567889999998888876543111135665553
No 273
>PRK05599 hypothetical protein; Provisional
Probab=98.68 E-value=4.5e-07 Score=81.87 Aligned_cols=113 Identities=15% Similarity=0.151 Sum_probs=70.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHHHHHHHHc-----
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS----- 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~l~~~~~----- 93 (397)
|++|||||++-||..++++|.+ |++|++++|+.... .. ....+.++.+|++|.+++++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~------g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 74 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH------GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL 74 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC------CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh
Confidence 4799999999999999999974 78999999975321 10 11247789999999987766543
Q ss_pred --cCCCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecC
Q 015961 94 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 145 (397)
Q Consensus 94 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 145 (397)
.+|.++|.|+...... + ...+..++|+.+..+++.++... ...-.+++.+||
T Consensus 75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 137 (246)
T PRK05599 75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSS 137 (246)
T ss_pred cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 3555667665322111 1 12344567887776555444221 111245666664
No 274
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.64 E-value=2.3e-07 Score=86.16 Aligned_cols=120 Identities=15% Similarity=0.054 Sum_probs=83.8
Q ss_pred ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-C--CCCCceEEEccCCCHHHHHHHHccCCC
Q 015961 21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-N--ADHLVEYVQCDVSDPEETQAKLSQLTD 97 (397)
Q Consensus 21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 97 (397)
|+...++||+|+||+|.||+.++..|.... ...+++++++...... . .+........+.+|+.++.+.++++|.
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~---~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDv 79 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNP---HVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADL 79 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcCC---CCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCE
Confidence 344445799999999999999999998521 2458999998322110 0 011112334566665555678999999
Q ss_pred eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
|+++++.......+..+.+..|+..++++++++++++ +.++++++|
T Consensus 80 VVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~--~~~iviv~S 125 (321)
T PTZ00325 80 VLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA--PKAIVGIVS 125 (321)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEec
Confidence 9999875433334678889999999999999999875 566766654
No 275
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.62 E-value=1.6e-07 Score=79.26 Aligned_cols=112 Identities=18% Similarity=0.213 Sum_probs=79.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCC-CcEEEEEeCC--CCCC------C-CCCCCceEEEccCCCHHHHHHHHcc--
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARR--PKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~-g~~V~~l~R~--~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
|++|||||+|-||..++++|++ + +..|+++.|+ .... . ....++.++++|+++.++++..++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~-----~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALAR-----RGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-----TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----cCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 5799999999999999999998 5 5678888887 1110 0 0125788999999999877766654
Q ss_pred -----CCCeeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 95 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 95 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
+|.++|+++...... +.....+++|+.+...+.+++.. ..-.+++++||
T Consensus 76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS 135 (167)
T PF00106_consen 76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISS 135 (167)
T ss_dssp HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEE
T ss_pred cccccccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecc
Confidence 445666655432111 13356789999999999998877 23566776664
No 276
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.61 E-value=7.4e-07 Score=82.54 Aligned_cols=119 Identities=16% Similarity=0.018 Sum_probs=82.0
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceEEEccCCCHHHHHHHH
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL 92 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~l~~~~ 92 (397)
.+..++.++|||||.-||..++++|.+ +|.+|+...|+.... ......+.++++|++|.+++....
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~-----~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa 105 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELAL-----RGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFA 105 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHH
Confidence 344568999999999999999999999 899999999986321 112356778999999998876655
Q ss_pred cc-------CCCeeEEEEecccCC----CcHHHHHHhHHHHHHHHHHHH----cccCCCcceEEEecCCc
Q 015961 93 SQ-------LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAV----IPNAPNLRHVCLQTGTK 147 (397)
Q Consensus 93 ~~-------~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~~~~~~s~~~ 147 (397)
+. .|..++-|+....+. +..+..+.+|..|...|.+.+ +... ..+||.+||..
T Consensus 106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~--~~RIV~vsS~~ 173 (314)
T KOG1208|consen 106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA--PSRIVNVSSIL 173 (314)
T ss_pred HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC--CCCEEEEcCcc
Confidence 43 233344444333222 235667899999976665544 4332 27888887644
No 277
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.61 E-value=1.2e-06 Score=73.03 Aligned_cols=166 Identities=15% Similarity=0.137 Sum_probs=102.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHcc--
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
..|.+..+||||+.-||++++..|.+ .|++|.+.+++...+ +....+-..+.||+.+.++++..++.
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~-----~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~ 85 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAK-----KGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEME 85 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHh-----cCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHH
Confidence 34567899999999999999999999 899999888875432 21222344789999999876654433
Q ss_pred -----CCCeeEEEEecc------cCCCcHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEecCCccccccccccCCC
Q 015961 95 -----LTDVTHIFYVTW------TNRSTEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKI 159 (397)
Q Consensus 95 -----~~~V~h~a~~~~------~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~ 159 (397)
.+.+++||+.+- ..+++.++.+.+|+.|+-.+.+++.+. ..+...++-+||+..-.+ .+|.
T Consensus 86 k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiG---N~GQ- 161 (256)
T KOG1200|consen 86 KSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIG---NFGQ- 161 (256)
T ss_pred HhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccc---cccc-
Confidence 344777776532 123367888999999988777766554 223335665554221111 1221
Q ss_pred CCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 160 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 160 ~~~~~~~~E~~p~~~~~~~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
..+..+ .... -+..+.+++.. ...++++-++-|+.|--
T Consensus 162 ----tnYAAs----K~Gv--IgftktaArEl-a~knIrvN~VlPGFI~t 199 (256)
T KOG1200|consen 162 ----TNYAAS----KGGV--IGFTKTAAREL-ARKNIRVNVVLPGFIAT 199 (256)
T ss_pred ----hhhhhh----cCce--eeeeHHHHHHH-hhcCceEeEeccccccC
Confidence 000000 0000 11244454444 45679999999988876
No 278
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.60 E-value=7.9e-08 Score=81.75 Aligned_cols=89 Identities=16% Similarity=0.081 Sum_probs=64.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccC----C
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL----T 96 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~ 96 (397)
++++|||||||+|. +++.|.+ .|++|++++|++... ......+.++.+|++|.+++..+++++ .
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~-----~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g 74 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCE-----KGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG 74 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHH-----CcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47999999999886 9999998 899999999875321 111246778899999999887777643 2
Q ss_pred CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961 97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA 134 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 134 (397)
.+..++. .+++.+++++..+|++.+
T Consensus 75 ~id~lv~-------------~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 75 PFDLAVA-------------WIHSSAKDALSVVCRELD 99 (177)
T ss_pred CCeEEEE-------------eccccchhhHHHHHHHHc
Confidence 2323221 234457778999999875
No 279
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.59 E-value=3e-07 Score=78.89 Aligned_cols=112 Identities=30% Similarity=0.293 Sum_probs=75.7
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC-CCCC---------CCCCCceEEEccCCCHHHHHHHHccC--
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPNW---------NADHLVEYVQCDVSDPEETQAKLSQL-- 95 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~-~~~~---------~~~~~v~~~~~Dl~d~~~l~~~~~~~-- 95 (397)
++|||||+|-||..+++.|.+. ...+|+++.|++ .... .....+.++.+|++|++++.+++..+
T Consensus 2 tylitGG~gglg~~la~~La~~----~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~ 77 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAER----GARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQ 77 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----T-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred EEEEECCccHHHHHHHHHHHHc----CCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHh
Confidence 6899999999999999999983 234699999983 2210 01246789999999999999988664
Q ss_pred -----CCeeEEEEeccc---CCC---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 96 -----TDVTHIFYVTWT---NRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 96 -----~~V~h~a~~~~~---~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
+.|+|+++.... ... .....+.+-+.|+.+|.++.... .+.+++..||
T Consensus 78 ~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SS 136 (181)
T PF08659_consen 78 RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSS 136 (181)
T ss_dssp TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEE
T ss_pred ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECC
Confidence 239999875321 111 23455788999999999998763 4788887764
No 280
>PLN00015 protochlorophyllide reductase
Probab=98.58 E-value=2.1e-07 Score=87.04 Aligned_cols=115 Identities=11% Similarity=0.060 Sum_probs=78.5
Q ss_pred EEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961 30 LIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-------Q 94 (397)
Q Consensus 30 LVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~-------~ 94 (397)
|||||++.||.+++++|++ +| ++|++..|+.... . .....+.++.+|++|.+++.+++. .
T Consensus 1 lITGas~GIG~aia~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 75 (308)
T PLN00015 1 IITGASSGLGLATAKALAE-----TGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP 75 (308)
T ss_pred CEeCCCChHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 6999999999999999998 78 9999999865321 1 012357788999999988766553 3
Q ss_pred CCCeeEEEEecccC--C-----CcHHHHHHhHHHHHHHHHHHHccc--CCC--cceEEEecCCccc
Q 015961 95 LTDVTHIFYVTWTN--R-----STEAENCKINGSMFRNVLRAVIPN--APN--LRHVCLQTGTKHY 149 (397)
Q Consensus 95 ~~~V~h~a~~~~~~--~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~--~~~~~~~s~~~~y 149 (397)
+|.++|.|+..... . +..+..+++|+.|+..+.+++... ..+ ..+++.+||...+
T Consensus 76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 56678877642211 1 134567899999987776655432 111 2467777765443
No 281
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.53 E-value=4.5e-07 Score=76.62 Aligned_cols=102 Identities=23% Similarity=0.252 Sum_probs=71.2
Q ss_pred CCEEEEEcC-CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--CCCCCCCceEEEccCCCHHHHHHHHccC----CC-
Q 015961 26 QSVALIVGV-TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQAKLSQL----TD- 97 (397)
Q Consensus 26 ~~~ILVtGa-tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~- 97 (397)
.++|||||+ .|-||.+|+++|.+ +|+.|++..|+-.. ++....++...+.|+++++++.+....+ +.
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~-----~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFAR-----NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHh-----CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 368898875 59999999999999 89999999997543 2222357889999999999876655432 22
Q ss_pred ---eeEEEEec--ccCCC----cHHHHHHhHHHHHHHHHHHHcc
Q 015961 98 ---VTHIFYVT--WTNRS----TEAENCKINGSMFRNVLRAVIP 132 (397)
Q Consensus 98 ---V~h~a~~~--~~~~~----~~~~~~~~nv~gt~~ll~a~~~ 132 (397)
.++-|+.. +...+ .-+..+++|+-|..++.++...
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h 125 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH 125 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH
Confidence 33333221 11111 3356789999998888777753
No 282
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.53 E-value=1.4e-06 Score=74.54 Aligned_cols=115 Identities=14% Similarity=0.115 Sum_probs=76.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC--------CCCCCCCceEEEccCCCHHHHHHHHcc--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--------NWNADHLVEYVQCDVSDPEETQAKLSQ-- 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~--------~~~~~~~v~~~~~Dl~d~~~l~~~~~~-- 94 (397)
.+|++++||+.|-||..+.++|++ +|..+.++..+.+. +..+...+-|+++|+++..+++++++.
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~-----kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLE-----KGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHH-----cCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence 478999999999999999999999 78887777655332 122345788999999999888777654
Q ss_pred --CCCeeEEEEecccCCC-cHHHHHHhHHHHH----HHHHHHHccc-CCCcceEEEec
Q 015961 95 --LTDVTHIFYVTWTNRS-TEAENCKINGSMF----RNVLRAVIPN-APNLRHVCLQT 144 (397)
Q Consensus 95 --~~~V~h~a~~~~~~~~-~~~~~~~~nv~gt----~~ll~a~~~~-~~~~~~~~~~s 144 (397)
...|+.+.-.+....+ +.+..+.+|+.|. ...+.+..+. +..-.-++-+|
T Consensus 79 ~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNms 136 (261)
T KOG4169|consen 79 ATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMS 136 (261)
T ss_pred HHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEec
Confidence 2334444333444333 6777888887764 4455655543 22333444444
No 283
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.53 E-value=1.7e-06 Score=77.85 Aligned_cols=162 Identities=16% Similarity=0.126 Sum_probs=101.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccC--
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQL-- 95 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~-- 95 (397)
+..+|-|||||+-.-.|..|+++|.+ +|+.|.+-.-.+..+ ....++...++.|++++++++++.+-+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~-----~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDK-----KGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHh-----cCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHH
Confidence 34457799999999999999999999 899998887543321 112467888999999999988776431
Q ss_pred ----C---CeeEEEEecccCC-------CcHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecCCccccccccccCCCC
Q 015961 96 ----T---DVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIK 160 (397)
Q Consensus 96 ----~---~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~ 160 (397)
+ .++|.|+...... ++.....++|+.|+..+..+.... .+.-.+++.+|| +-|..
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS---------~~GR~- 170 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSS---------VLGRV- 170 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecc---------cccCc-
Confidence 1 2778776432221 145667799999976665554332 111234555543 33321
Q ss_pred CCCCCCCCCCCCCCCCCcchhHHHH---HHHHHhcCCCeeEEEEcCCceee
Q 015961 161 PYDPPFTEDMPRLDAPNFYYTLEDI---LFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 161 ~~~~~~~E~~p~~~~~~~~y~~e~~---l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
..|. ..|...+.|+.|.+ ++..+ ...|++++++-|| ++-
T Consensus 171 --~~p~-----~g~Y~~SK~aVeaf~D~lR~EL-~~fGV~VsiiePG-~f~ 212 (322)
T KOG1610|consen 171 --ALPA-----LGPYCVSKFAVEAFSDSLRREL-RPFGVKVSIIEPG-FFK 212 (322)
T ss_pred --cCcc-----cccchhhHHHHHHHHHHHHHHH-HhcCcEEEEeccC-ccc
Confidence 1110 11223334554433 33333 5789999999999 444
No 284
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.50 E-value=1.9e-06 Score=72.66 Aligned_cols=163 Identities=13% Similarity=0.078 Sum_probs=102.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHc-------c
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------Q 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~-------~ 94 (397)
++.+||||||+.-||..|+++|++ -|-+|++..|+...- ....+.+.-..||+.|.+..++.++ .
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~e-----lgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLE-----LGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHH-----hCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCc
Confidence 467999999999999999999998 788999999985321 1123678889999999875544332 2
Q ss_pred CCCeeEEEEeccc----CCC----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccCCCCCCCC
Q 015961 95 LTDVTHIFYVTWT----NRS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 95 ~~~V~h~a~~~~~----~~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
.+.+++.|+.-.. ..+ +..+.+++|+.++..|..+...+ ...---++-+|| -.+..
T Consensus 79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSS---------GLafv----- 144 (245)
T COG3967 79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSS---------GLAFV----- 144 (245)
T ss_pred hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecc---------ccccC-----
Confidence 4457777765221 111 23456789999998887777654 111223444442 12211
Q ss_pred CCCCCCCCCCCCC-cchhHHHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 165 PFTEDMPRLDAPN-FYYTLEDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 165 ~~~E~~p~~~~~~-~~y~~e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
| .+..|.+...- .-...+..|++.. +..++.+.-+=|+.|--
T Consensus 145 P-m~~~PvYcaTKAaiHsyt~aLR~Ql-k~t~veVIE~~PP~V~t 187 (245)
T COG3967 145 P-MASTPVYCATKAAIHSYTLALREQL-KDTSVEVIELAPPLVDT 187 (245)
T ss_pred c-ccccccchhhHHHHHHHHHHHHHHh-hhcceEEEEecCCceec
Confidence 1 12222221110 0011366777776 77789999999988876
No 285
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.48 E-value=5e-07 Score=81.29 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=71.3
Q ss_pred HHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc----CCCeeEEEEecccCCCcHHHHHH
Q 015961 42 LAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ----LTDVTHIFYVTWTNRSTEAENCK 117 (397)
Q Consensus 42 lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~----~~~V~h~a~~~~~~~~~~~~~~~ 117 (397)
++++|++ +|++|++++|+.... ...+++++|++|.+++.++++. +|.++|.|+.. ...+.+..++
T Consensus 1 ~a~~l~~-----~G~~Vv~~~r~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~--~~~~~~~~~~ 69 (241)
T PRK12428 1 TARLLRF-----LGARVIGVDRREPGM----TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP--GTAPVELVAR 69 (241)
T ss_pred ChHHHHh-----CCCEEEEEeCCcchh----hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC--CCCCHHHhhh
Confidence 4677887 899999999976442 2246789999999998887764 67788887642 2345678899
Q ss_pred hHHHHHHHHHHHHcccCCCcceEEEecCCccc
Q 015961 118 INGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY 149 (397)
Q Consensus 118 ~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y 149 (397)
+|+.++..+++++...-.+-.+++++||...|
T Consensus 70 vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~ 101 (241)
T PRK12428 70 VNFLGLRHLTEALLPRMAPGGAIVNVASLAGA 101 (241)
T ss_pred hchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence 99999999999887541122578888776555
No 286
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.44 E-value=1.9e-06 Score=77.22 Aligned_cols=120 Identities=16% Similarity=0.081 Sum_probs=79.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC------CCCCceEEEccCCCHHHHHHHHc---
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLS--- 93 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~--- 93 (397)
+-.++.||||||.+-+|+.++.++++ +|.++.+.+..+..... ....+....||++|.+++....+
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~-----rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAK-----RGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHH-----hCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence 33578999999999999999999999 78888888887643211 11257789999999987655443
Q ss_pred ----cCCCeeEEEEecccCC----C--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCc
Q 015961 94 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTK 147 (397)
Q Consensus 94 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~ 147 (397)
.++.+++-|+...... + .-+..+++|+.|.-...++.... ..+=.|++.++|..
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~a 175 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVA 175 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhh
Confidence 2444666666533211 1 23556789999865544443322 12346778776543
No 287
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.43 E-value=3.9e-06 Score=75.53 Aligned_cols=159 Identities=19% Similarity=0.105 Sum_probs=102.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC---CCCCceEEEccCCCHHHHHHHHccC--
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLSQL-- 95 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~l~~~~~~~-- 95 (397)
++|+|||++--+|..++.++.. +|++|+++.|+..+. +. ....+.+..+|+.|.+++...+++.
T Consensus 34 ~hi~itggS~glgl~la~e~~~-----~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKR-----EGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHH-----ccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 6899999999999999999998 899999999985431 11 1123668899999998877776654
Q ss_pred -----CCeeEEEEecccCC--C----cHHHHHHhHHHHHHHHHHHHcccCCC---cceEEEecCCccccccccccCCCCC
Q 015961 96 -----TDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPN---LRHVCLQTGTKHYLGPFEAFGKIKP 161 (397)
Q Consensus 96 -----~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~---~~~~~~~s~~~~y~ss~~~~g~~~~ 161 (397)
|.++|+|+.+.... + .-+...++|..|+-|++.++....+. ..+++.+||..... ..||..
T Consensus 109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~---~i~Gys-- 183 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML---GIYGYS-- 183 (331)
T ss_pred ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc---Cccccc--
Confidence 34777776543221 1 23456789999999999877665222 33777776422111 123321
Q ss_pred CCCCCCCCCCCCCCCCcchhH---HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 162 YDPPFTEDMPRLDAPNFYYTL---EDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 162 ~~~~~~E~~p~~~~~~~~y~~---e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
..+...++. ...++... ...++.++..-|+.+--
T Consensus 184 ------------aYs~sK~alrgLa~~l~qE~-i~~~v~Vt~~~P~~~~t 220 (331)
T KOG1210|consen 184 ------------AYSPSKFALRGLAEALRQEL-IKYGVHVTLYYPPDTLT 220 (331)
T ss_pred ------------ccccHHHHHHHHHHHHHHHH-hhcceEEEEEcCCCCCC
Confidence 111122331 33333333 45589999988887776
No 288
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.43 E-value=5.3e-06 Score=71.11 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=67.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC-CCCC------C-CCCCCceEEEccCCCHHHHHHHHccC---
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR-PKPN------W-NADHLVEYVQCDVSDPEETQAKLSQL--- 95 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~-~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~~~~--- 95 (397)
+.|+||||+.-||--|+++|++. +|.++++..++ ++.+ + ..++++++++.|+++.+++.+..+++
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~----~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKD----KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcC----CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 57999999999999999999986 57776666554 4431 1 13689999999999998877665442
Q ss_pred ------CCeeEEEEecccCC---C-c---HHHHHHhHHHHHHHHHHHH
Q 015961 96 ------TDVTHIFYVTWTNR---S-T---EAENCKINGSMFRNVLRAV 130 (397)
Q Consensus 96 ------~~V~h~a~~~~~~~---~-~---~~~~~~~nv~gt~~ll~a~ 130 (397)
+..++.|+...... . + ..+.+++|..|+..+.+++
T Consensus 80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~ 127 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF 127 (249)
T ss_pred cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence 22444444322111 1 1 3456789998876655544
No 289
>PLN00106 malate dehydrogenase
Probab=98.42 E-value=1.6e-06 Score=80.64 Aligned_cols=107 Identities=14% Similarity=0.072 Sum_probs=75.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--C-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 103 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~ 103 (397)
+||+||||+|.||+.++..|.... ...+++++++.+... . ..+........++.+.+++.+++.++|.|+|+|+
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~---~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNP---LVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 689999999999999999998622 223799999865211 0 0011111223344444457788999999999987
Q ss_pred ecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961 104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 136 (397)
Q Consensus 104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 136 (397)
....+..+..+....|+..++++.+++++++++
T Consensus 96 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~ 128 (323)
T PLN00106 96 VPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPN 128 (323)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 644433467889999999999999999988643
No 290
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.38 E-value=1e-05 Score=73.69 Aligned_cols=160 Identities=16% Similarity=0.058 Sum_probs=101.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHH
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL 92 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~ 92 (397)
...+|.+|||||+.-||..++++|.+ .|.+|++..|+.... .....++..+.+|+++.++.++++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~-----~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~ 79 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAK-----AGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLV 79 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHH
Confidence 44678999999999999999999999 899999999976431 111245788999999886543332
Q ss_pred --------ccCCCeeEEEEecccCC---C----cHHHHHHhHHHH-HHHHHHHHccc--CCCcceEEEecCCcccccccc
Q 015961 93 --------SQLTDVTHIFYVTWTNR---S----TEAENCKINGSM-FRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFE 154 (397)
Q Consensus 93 --------~~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~g-t~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~ 154 (397)
-.+|.+++.|+...... + ..+..+++|+.| +.++..++..+ ..+--.++++|+...+..
T Consensus 80 ~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~--- 156 (270)
T KOG0725|consen 80 EFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP--- 156 (270)
T ss_pred HHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC---
Confidence 33666677666433221 1 456678999995 66666666654 222345555553221110
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcchhH--------HHHHHHHHhcCCCeeEEEEcCCceeec
Q 015961 155 AFGKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF 209 (397)
Q Consensus 155 ~~g~~~~~~~~~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G~ 209 (397)
+ .+.. .+|+. .+-++... ..+|+++-.+-|+.|..+
T Consensus 157 --~---------------~~~~-~~Y~~sK~al~~ltr~lA~El-~~~gIRvN~v~PG~i~T~ 200 (270)
T KOG0725|consen 157 --G---------------PGSG-VAYGVSKAALLQLTRSLAKEL-AKHGIRVNSVSPGLVKTS 200 (270)
T ss_pred --C---------------CCCc-ccchhHHHHHHHHHHHHHHHH-hhcCcEEEEeecCcEeCC
Confidence 0 0001 22443 23333222 567899999999988874
No 291
>PRK09620 hypothetical protein; Provisional
Probab=98.31 E-value=9.8e-07 Score=78.11 Aligned_cols=74 Identities=14% Similarity=0.024 Sum_probs=51.9
Q ss_pred CCEEEEEcCC----------------ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHH
Q 015961 26 QSVALIVGVT----------------GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPE 86 (397)
Q Consensus 26 ~~~ILVtGat----------------GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~ 86 (397)
+|+||||+|. ||+|++|+++|++ +|++|+++++..... ......+..+.+|....+
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~-----~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~ 77 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELIS-----KGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQD 77 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHH-----CCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHH
Confidence 6899999886 9999999999999 899999998743211 111112334555333335
Q ss_pred HHHHHHc--cCCCeeEEEEe
Q 015961 87 ETQAKLS--QLTDVTHIFYV 104 (397)
Q Consensus 87 ~l~~~~~--~~~~V~h~a~~ 104 (397)
.+.+.+. ++|.|+|+|+.
T Consensus 78 ~l~~~~~~~~~D~VIH~AAv 97 (229)
T PRK09620 78 KMKSIITHEKVDAVIMAAAG 97 (229)
T ss_pred HHHHHhcccCCCEEEECccc
Confidence 6777774 57889999875
No 292
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.28 E-value=1.4e-05 Score=92.03 Aligned_cols=116 Identities=17% Similarity=0.126 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C------------------------------
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W------------------------------ 69 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~------------------------------ 69 (397)
..++.+|||||+|-||..++++|.+. .|++|+++.|++... |
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~----~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~ 2070 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQ----CQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVD 2070 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHh----cCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhh
Confidence 35689999999999999999999972 368999999972100 0
Q ss_pred --------------------CCCCCceEEEccCCCHHHHHHHHcc------CCCeeEEEEecccC---C---CcHHHHHH
Q 015961 70 --------------------NADHLVEYVQCDVSDPEETQAKLSQ------LTDVTHIFYVTWTN---R---STEAENCK 117 (397)
Q Consensus 70 --------------------~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~V~h~a~~~~~~---~---~~~~~~~~ 117 (397)
.....+.++.+|++|.+++.+++.. +|.|+|.|+..... . +.....++
T Consensus 2071 ~~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~ 2150 (2582)
T TIGR02813 2071 ALVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYG 2150 (2582)
T ss_pred hcccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 0012467899999999887766643 57789987753221 1 14566789
Q ss_pred hHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 118 INGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 118 ~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
+|+.|+.++++++.... ..+|+.+||
T Consensus 2151 ~nv~G~~~Ll~al~~~~--~~~IV~~SS 2176 (2582)
T TIGR02813 2151 TKVDGLLSLLAALNAEN--IKLLALFSS 2176 (2582)
T ss_pred HHHHHHHHHHHHHHHhC--CCeEEEEec
Confidence 99999999999987642 456776664
No 293
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.27 E-value=2.1e-05 Score=72.98 Aligned_cols=117 Identities=14% Similarity=0.020 Sum_probs=72.6
Q ss_pred CCCCCEEEEEcC--CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC----------C-------CCC---CCCceEEEc
Q 015961 23 RSYQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----------N-------WNA---DHLVEYVQC 80 (397)
Q Consensus 23 ~~~~~~ILVtGa--tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~----------~-------~~~---~~~v~~~~~ 80 (397)
+.++|.+||||| +.-||..+++.|.+ .|.+|++ .|.... . ... ......+.+
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~-----~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAA-----AGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPL 79 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHH-----CCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence 356789999999 79999999999999 8999887 443110 0 000 011356788
Q ss_pred cC--CCHH------------------HHHHHH-------ccCCCeeEEEEecc---cC-C----CcHHHHHHhHHHHHHH
Q 015961 81 DV--SDPE------------------ETQAKL-------SQLTDVTHIFYVTW---TN-R----STEAENCKINGSMFRN 125 (397)
Q Consensus 81 Dl--~d~~------------------~l~~~~-------~~~~~V~h~a~~~~---~~-~----~~~~~~~~~nv~gt~~ 125 (397)
|+ .+++ ++++++ ..+|.++|.|+... .+ . ++....+++|+.++..
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 88 3222 443333 23677888874211 11 1 1456678999999988
Q ss_pred HHHHHcccCCCcceEEEecC
Q 015961 126 VLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 126 ll~a~~~~~~~~~~~~~~s~ 145 (397)
+++++...-..--+++++||
T Consensus 160 l~~~~~p~m~~~G~II~isS 179 (303)
T PLN02730 160 LLQHFGPIMNPGGASISLTY 179 (303)
T ss_pred HHHHHHHHHhcCCEEEEEec
Confidence 88877654111145666653
No 294
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.21 E-value=4.7e-06 Score=74.02 Aligned_cols=68 Identities=16% Similarity=0.148 Sum_probs=48.8
Q ss_pred cCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCC--HHHHHHHHccCCCeeEEEEec
Q 015961 33 GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD--PEETQAKLSQLTDVTHIFYVT 105 (397)
Q Consensus 33 GatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~~V~h~a~~~ 105 (397)
.+|||+|++|+++|++ +|++|+++.|..........+++++.++-.+ .+.+.+.+.++|.|+|+|+.+
T Consensus 23 ~SSG~iG~aLA~~L~~-----~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs 92 (229)
T PRK06732 23 HSTGQLGKIIAETFLA-----AGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS 92 (229)
T ss_pred ccchHHHHHHHHHHHh-----CCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence 6799999999999998 8999999997643211112467776654332 245566677888999998754
No 295
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.21 E-value=2.8e-06 Score=80.09 Aligned_cols=86 Identities=22% Similarity=0.144 Sum_probs=68.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
++|||.|| |+||+.++..|++ ++ .+|++.+|+..+. ....++++.+++|+.|.+++.+++++.|.|+++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~-----~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQ-----NGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINA 75 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHh-----CCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence 68999997 9999999999998 45 7999999986432 112348999999999999999999999989998
Q ss_pred EEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961 102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA 134 (397)
Q Consensus 102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 134 (397)
+-.. . ..+++++|.+.+
T Consensus 76 ~p~~---~-------------~~~i~ka~i~~g 92 (389)
T COG1748 76 APPF---V-------------DLTILKACIKTG 92 (389)
T ss_pred CCch---h-------------hHHHHHHHHHhC
Confidence 5311 0 115788888865
No 296
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.20 E-value=1.1e-05 Score=75.40 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=77.0
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCceEEEccCCCH-----------HHHHHHHcc
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKLSQ 94 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~l~~~~~~ 94 (397)
||.||||+|++|+.++..|...+-.. ..++++.+++.... +..+....|+.|. ....+.+++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~ 76 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALEGVVMELQDCAFPLLKGVVITTDPEEAFKD 76 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----CccceeeeehhhhcccccCCcEEecChHHHhCC
Confidence 79999999999999999988632221 12358888886521 1223334444443 245678999
Q ss_pred CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 015961 95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVC 141 (397)
Q Consensus 95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~ 141 (397)
+|.|+|+|+....+..+..+.+..|+.-.+.+.+.+.+.+ +..+.++
T Consensus 77 aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv 124 (323)
T cd00704 77 VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV 124 (323)
T ss_pred CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9999999886544444788899999999999999999874 5554443
No 297
>PRK06720 hypothetical protein; Provisional
Probab=98.18 E-value=6e-06 Score=69.79 Aligned_cols=76 Identities=17% Similarity=0.076 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------C-CCCCCceEEEccCCCHHHHHHHH-----
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL----- 92 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~l~~~~----- 92 (397)
.++.++||||+|.||..+++.|.+ .|++|++++|+.... . .....+.++.+|+++.+++.+.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~-----~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAK-----QGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 357899999999999999999998 799999999875321 0 01234567899999998776543
Q ss_pred --ccCCCeeEEEEec
Q 015961 93 --SQLTDVTHIFYVT 105 (397)
Q Consensus 93 --~~~~~V~h~a~~~ 105 (397)
..+|.++|.|+..
T Consensus 90 ~~G~iDilVnnAG~~ 104 (169)
T PRK06720 90 AFSRIDMLFQNAGLY 104 (169)
T ss_pred HcCCCCEEEECCCcC
Confidence 3467788887653
No 298
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.18 E-value=1.8e-05 Score=71.52 Aligned_cols=116 Identities=19% Similarity=0.135 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----C--CCC----CCceEEEccCCC-HHHHHHHH
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W--NAD----HLVEYVQCDVSD-PEETQAKL 92 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~--~~~----~~v~~~~~Dl~d-~~~l~~~~ 92 (397)
.++++||||||++-||..+++.|.+ +|++|+++.|+.... . ... ..+.+..+|+++ .++++.++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~ 77 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAR-----EGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALV 77 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHH
Confidence 3458999999999999999999997 899988888865421 0 011 256678899998 76654443
Q ss_pred c-------cCCCeeEEEEeccc--CC-----CcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 93 S-------QLTDVTHIFYVTWT--NR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 93 ~-------~~~~V~h~a~~~~~--~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
. .+|.+++.|+.... .. +..+..+++|+.|...+.+++..... -++++.+||
T Consensus 78 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~Iv~isS 143 (251)
T COG1028 78 AAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQRIVNISS 143 (251)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hCeEEEECC
Confidence 2 25656666554221 11 14466789999998888875554321 117776664
No 299
>PRK05086 malate dehydrogenase; Provisional
Probab=98.06 E-value=3.1e-05 Score=72.11 Aligned_cols=111 Identities=13% Similarity=0.064 Sum_probs=73.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---C-CCC-CCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-NAD-HLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~-~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
+||+|+||||.+|++++..|..... .++++++++|.+... . ..+ +....+.+ .+.+++.+.++++|.|+.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~--~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIit 76 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLP--AGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLIS 76 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC--CccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEc
Confidence 5899999999999999988743100 356888888864321 0 011 11122333 1223445677889988888
Q ss_pred EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEe
Q 015961 102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQ 143 (397)
Q Consensus 102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~ 143 (397)
++.......++.+.+..|...++++++++++++ +..++.+
T Consensus 77 aG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~--~~~iviv 116 (312)
T PRK05086 77 AGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC--PKACIGI 116 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEE
Confidence 665433333678889999999999999999875 4445444
No 300
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.04 E-value=0.00014 Score=67.36 Aligned_cols=36 Identities=17% Similarity=0.093 Sum_probs=31.1
Q ss_pred CCCCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961 23 RSYQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVAR 63 (397)
Q Consensus 23 ~~~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R 63 (397)
..++|.+|||||+ .-||.++++.|.+ +|++|++.+|
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~-----~Ga~Vvv~~~ 42 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAE-----AGATILVGTW 42 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHH-----CCCEEEEEec
Confidence 3457899999995 8999999999999 8999988664
No 301
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.02 E-value=3e-05 Score=72.45 Aligned_cols=108 Identities=14% Similarity=0.153 Sum_probs=74.3
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH-----------HHHHHHcc
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE-----------ETQAKLSQ 94 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~-----------~l~~~~~~ 94 (397)
+|.|+||+|.+|+.++..|....... +.++++.+++.+... ..+....|+.|.. ...+.+++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~ 75 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----VLEGVVMELMDCAFPLLDGVVPTHDPAVAFTD 75 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----ccceeEeehhcccchhcCceeccCChHHHhCC
Confidence 58999999999999999998632211 122588888864321 1223344444443 34578899
Q ss_pred CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC-CCcceE
Q 015961 95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHV 140 (397)
Q Consensus 95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~ 140 (397)
+|.|+|+|+.......+..+....|+.-.+.+.+.+.++. +..+.+
T Consensus 76 aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iii 122 (324)
T TIGR01758 76 VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVL 122 (324)
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 9999999875433333578889999999999999998873 444333
No 302
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.97 E-value=3.9e-05 Score=69.06 Aligned_cols=90 Identities=13% Similarity=0.045 Sum_probs=64.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFY 103 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a~ 103 (397)
++|||+||||. |+.|++.|.+ .|++|++.++..... .....+...+..+..|.+++.+.++. ++.|++..|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~-----~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIA-----QGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHh-----CCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 47999999999 9999999998 799999999976432 22222334556777888888888876 455777643
Q ss_pred ecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961 104 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAP 135 (397)
Q Consensus 104 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~ 135 (397)
. + -..-++|+.++|++.+.
T Consensus 75 P-----------f--A~~is~~a~~a~~~~~i 93 (256)
T TIGR00715 75 P-----------F--AAQITTNATAVCKELGI 93 (256)
T ss_pred H-----------H--HHHHHHHHHHHHHHhCC
Confidence 2 1 12456678899998763
No 303
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.87 E-value=3.4e-05 Score=72.06 Aligned_cols=160 Identities=13% Similarity=0.043 Sum_probs=93.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-------EEEEEeCCCCC--C------CCC-----CCCceEEEccCCCH
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPKP--N------WNA-----DHLVEYVQCDVSDP 85 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-------~V~~l~R~~~~--~------~~~-----~~~v~~~~~Dl~d~ 85 (397)
++||.|+||+|++|+.++..|+. ++. +++.++..... . +.. ..++++.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~------- 69 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIAS-----GEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT------- 69 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-----ccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------
Confidence 36899999999999999999986 333 68888874322 1 000 0111111
Q ss_pred HHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEecCCccccccccccCCCCCCCC
Q 015961 86 EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDP 164 (397)
Q Consensus 86 ~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 164 (397)
....+.++++|.|+.+|+....+..+..+.+..|+.-.+.+.+.+.++++ ..+. +.+|- +..+.. .
T Consensus 70 ~~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~ii-ivvsN------PvD~~t------~ 136 (322)
T cd01338 70 DDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKV-LVVGN------PCNTNA------L 136 (322)
T ss_pred cCcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEE-EEecC------cHHHHH------H
Confidence 11246689999888887654333347788899999999999999998763 4443 32331 000000 0
Q ss_pred CCCCCCC-CCCCCCcchhH--HHHHHHHHhcCCCeeEEEEcCCceeecc
Q 015961 165 PFTEDMP-RLDAPNFYYTL--EDILFEEVEKKEELSWSVHRPDTIFGFS 210 (397)
Q Consensus 165 ~~~E~~p-~~~~~~~~y~~--e~~l~~~~~~~~g~~~~ilRp~~v~G~~ 210 (397)
-..+..+ ..+...+..+. +..++...++..+++...+|...|||..
T Consensus 137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 0001111 11111211111 2333333347788999999988999943
No 304
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.77 E-value=6.8e-05 Score=67.35 Aligned_cols=148 Identities=16% Similarity=0.142 Sum_probs=93.1
Q ss_pred cCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHH--------ccCC
Q 015961 33 GVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKL--------SQLT 96 (397)
Q Consensus 33 Gat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~--------~~~~ 96 (397)
|++ +-||..++++|++ .|++|++++|+.... .....+.+++.+|++|+++++.++ ..+|
T Consensus 1 g~~~s~GiG~aia~~l~~-----~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD 75 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAE-----EGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID 75 (241)
T ss_dssp STSSTSHHHHHHHHHHHH-----TTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred CCCCCCChHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence 666 9999999999999 899999999986531 001123457999999998776653 4467
Q ss_pred CeeEEEEeccc---CCC-------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccccccccccCCCCCCCCCC
Q 015961 97 DVTHIFYVTWT---NRS-------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 166 (397)
Q Consensus 97 ~V~h~a~~~~~---~~~-------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~~~ 166 (397)
.++|.++.... ..+ .....+++|+.++..+++++.+.-.+-..++++|+.. + ..+
T Consensus 76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~---------~-----~~~- 140 (241)
T PF13561_consen 76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA---------A-----QRP- 140 (241)
T ss_dssp EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG---------G-----TSB-
T ss_pred EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh---------h-----ccc-
Confidence 78888775432 111 3455678999999888887755411123455554211 1 000
Q ss_pred CCCCCCCCCCCcchhH--------HHHHHHHHhcC-CCeeEEEEcCCceee
Q 015961 167 TEDMPRLDAPNFYYTL--------EDILFEEVEKK-EELSWSVHRPDTIFG 208 (397)
Q Consensus 167 ~E~~p~~~~~~~~y~~--------e~~l~~~~~~~-~g~~~~ilRp~~v~G 208 (397)
.+. ...|+. .+.++..+ .. .|+++-.+.|+.|..
T Consensus 141 ------~~~-~~~y~~sKaal~~l~r~lA~el-~~~~gIrVN~V~pG~i~t 183 (241)
T PF13561_consen 141 ------MPG-YSAYSASKAALEGLTRSLAKEL-APKKGIRVNAVSPGPIET 183 (241)
T ss_dssp ------STT-THHHHHHHHHHHHHHHHHHHHH-GGHGTEEEEEEEESSBSS
T ss_pred ------Ccc-chhhHHHHHHHHHHHHHHHHHh-ccccCeeeeeecccceec
Confidence 011 112542 33333333 45 789999999998876
No 305
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.71 E-value=5.4e-05 Score=65.65 Aligned_cols=72 Identities=22% Similarity=0.136 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
.+++++|+||+|.+|+.+++.|.+ .|++|++++|+.... .....+.+...+|..+.+++.+.+.++|.|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~-----~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAR-----EGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence 457999999999999999999998 788999999975321 101124556678888998888999999876
Q ss_pred eEE
Q 015961 99 THI 101 (397)
Q Consensus 99 ~h~ 101 (397)
++.
T Consensus 102 i~a 104 (194)
T cd01078 102 FAA 104 (194)
T ss_pred EEC
Confidence 664
No 306
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.70 E-value=6.4e-05 Score=61.73 Aligned_cols=102 Identities=17% Similarity=0.074 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCC-CceEEEccCCCHHHHHHHHccCCC---
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADH-LVEYVQCDVSDPEETQAKLSQLTD--- 97 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~--- 97 (397)
-++.|++||+.--||+.++..|.+ .|.+|+++.|.+..-. ...+ -|..+.+|+.+-+.+.+.+..+-+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~-----aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg 80 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAK-----AGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG 80 (245)
T ss_pred cceEEEeecccccccHHHHHHHHh-----cCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence 357899999999999999999999 8999999999864320 1223 488999999998888887776544
Q ss_pred eeEEEEecccCC------CcHHHHHHhHHHHHHHHHHHHc
Q 015961 98 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVI 131 (397)
Q Consensus 98 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~ 131 (397)
.++-|+.+-... .+.+..|++|+.+..++.+...
T Consensus 81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~va 120 (245)
T KOG1207|consen 81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVA 120 (245)
T ss_pred hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHH
Confidence 444444322211 1345567899998877766543
No 307
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.69 E-value=9.3e-05 Score=66.83 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=96.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC--CCCCceEEEccCCCHH----HHH
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPE----ETQ 89 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~----~l~ 89 (397)
...+++-..|||||.-||+..+++|.+ +|++|+.++|..++- .. ..-.+.++..|.++.+ .+.
T Consensus 45 ~~~~g~WAVVTGaTDGIGKayA~eLAk-----rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~ 119 (312)
T KOG1014|consen 45 KEKLGSWAVVTGATDGIGKAYARELAK-----RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLL 119 (312)
T ss_pred HHhcCCEEEEECCCCcchHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHH
Confidence 345667899999999999999999999 899999999986431 11 1135778899998765 466
Q ss_pred HHHccCCC--eeEEEEecccCCC-----cH---HHHHHhHHHHHHHHHHHHccc--CCCcceEEEecCCccccccccccC
Q 015961 90 AKLSQLTD--VTHIFYVTWTNRS-----TE---AENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG 157 (397)
Q Consensus 90 ~~~~~~~~--V~h~a~~~~~~~~-----~~---~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g 157 (397)
+.+.+.|. .++.++..+.... +. .....+|+.++..+.+..... .++-.-++.++| + -|
T Consensus 120 ~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS------~---ag 190 (312)
T KOG1014|consen 120 EKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGS------F---AG 190 (312)
T ss_pred HHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecc------c---cc
Confidence 66777775 6666665442211 11 233467777766555544332 111223443332 1 11
Q ss_pred CCCCCCCCCCCCCCCCCCCC-cchhH--------HHHHHHHHhcCCCeeEEEEcCCceee
Q 015961 158 KIKPYDPPFTEDMPRLDAPN-FYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 208 (397)
Q Consensus 158 ~~~~~~~~~~E~~p~~~~~~-~~y~~--------e~~l~~~~~~~~g~~~~ilRp~~v~G 208 (397)
- .|.+. ..|+. ++.|.+.+ +..|+.+-.+-|..|-.
T Consensus 191 ~--------------~p~p~~s~ysasK~~v~~~S~~L~~Ey-~~~gI~Vq~v~p~~VaT 235 (312)
T KOG1014|consen 191 L--------------IPTPLLSVYSASKAFVDFFSRCLQKEY-ESKGIFVQSVIPYLVAT 235 (312)
T ss_pred c--------------ccChhHHHHHHHHHHHHHHHHHHHHHH-HhcCeEEEEeehhheec
Confidence 0 11111 12443 44455555 67789888888888877
No 308
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=97.68 E-value=3.3e-05 Score=53.08 Aligned_cols=34 Identities=15% Similarity=0.078 Sum_probs=24.1
Q ss_pred ccccchhhHHH-cCCCCccCCHHHHHHHHHHHhcC
Q 015961 360 AKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 393 (397)
Q Consensus 360 ~~~~d~~k~~~-lG~~p~~~~~e~~~~~~~~~~~~ 393 (397)
.++.|++||++ |||+|+++++++++++.+|++++
T Consensus 24 ~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n 58 (62)
T PF13950_consen 24 HLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN 58 (62)
T ss_dssp EE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred hhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence 56789999985 79999999999999999999875
No 309
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.65 E-value=2.2e-05 Score=73.25 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
..+++|+||||+|+||+.++++|.+. .| .+|+.++|+...... -..++..+++. ++.+++.++|.|+|++
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~----~gv~~lilv~R~~~rl~~--La~el~~~~i~---~l~~~l~~aDiVv~~t 223 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAK----TGVAELLLVARQQERLQE--LQAELGGGKIL---SLEEALPEADIVVWVA 223 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhh----CCCCEEEEEcCCHHHHHH--HHHHhccccHH---hHHHHHccCCEEEECC
Confidence 45689999999999999999999852 23 479989886432210 01112234443 4667889999999997
Q ss_pred Ee
Q 015961 103 YV 104 (397)
Q Consensus 103 ~~ 104 (397)
+.
T Consensus 224 s~ 225 (340)
T PRK14982 224 SM 225 (340)
T ss_pred cC
Confidence 64
No 310
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.62 E-value=0.00015 Score=69.71 Aligned_cols=73 Identities=18% Similarity=0.004 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH
Q 015961 23 RSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE 86 (397)
Q Consensus 23 ~~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~ 86 (397)
+..+++|||||| +|.+|.+++++|.+ .|++|++++++..... ..+ +..+|+++.+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~-----~Ga~V~~v~~~~~~~~--~~~--~~~~dv~~~~ 255 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAAR-----RGADVTLVSGPVNLPT--PAG--VKRIDVESAQ 255 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHH-----CCCEEEEeCCCccccC--CCC--cEEEccCCHH
Confidence 346789999999 99999999999999 8999999998653211 122 3467999987
Q ss_pred HHHHHH----ccCCCeeEEEEe
Q 015961 87 ETQAKL----SQLTDVTHIFYV 104 (397)
Q Consensus 87 ~l~~~~----~~~~~V~h~a~~ 104 (397)
++.+++ ..+|.++|.|+.
T Consensus 256 ~~~~~v~~~~~~~DilI~~Aav 277 (399)
T PRK05579 256 EMLDAVLAALPQADIFIMAAAV 277 (399)
T ss_pred HHHHHHHHhcCCCCEEEEcccc
Confidence 766655 346778888764
No 311
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.53 E-value=0.00013 Score=70.54 Aligned_cols=70 Identities=33% Similarity=0.423 Sum_probs=53.2
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
|+|.|| |++|+.+++.|.+. ..+ +|++.+|+.... .....+++.+++|+.|.+++.++++++|.|++++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~----~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~ 75 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARR----GPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCA 75 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCT----TCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred CEEEcC-cHHHHHHHHHHhcC----CCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence 799999 99999999999984 345 899999986431 1133689999999999999999999999999984
Q ss_pred E
Q 015961 103 Y 103 (397)
Q Consensus 103 ~ 103 (397)
.
T Consensus 76 g 76 (386)
T PF03435_consen 76 G 76 (386)
T ss_dssp S
T ss_pred c
Confidence 3
No 312
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.44 E-value=0.00012 Score=59.86 Aligned_cols=105 Identities=15% Similarity=0.129 Sum_probs=70.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL 95 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 95 (397)
+||.|+||+|.+|++++..|...+. ..+++++++..... ......+.+..+| .+.++++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l---~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL---ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT---SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC---CCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccc
Confidence 4899999999999999999987432 34799999874321 0011122233322 2346778
Q ss_pred CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
|.|+-.++....+..+..+.++.|..-.+.+.+.+.+.+++...++
T Consensus 71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~viv 116 (141)
T PF00056_consen 71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIV 116 (141)
T ss_dssp SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEE
Confidence 8776665433223346788899999999999999998876554333
No 313
>PRK05442 malate dehydrogenase; Provisional
Probab=97.37 E-value=0.0016 Score=60.91 Aligned_cols=104 Identities=16% Similarity=0.128 Sum_probs=66.8
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCCCCCCCCceEEEccCCCH-----------HHHHHHH
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKL 92 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~l~~~~ 92 (397)
++||.|+||+|++|+.++..|....... .-.+++.++..+.... .+-...|+.|. ....+.+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~-----~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~ 78 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKA-----LEGVVMELDDCAFPLLAGVVITDDPNVAF 78 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccc-----cceeehhhhhhhhhhcCCcEEecChHHHh
Confidence 4699999999999999999887621110 0116888887532110 00011111110 1224668
Q ss_pred ccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961 93 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA 134 (397)
Q Consensus 93 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 134 (397)
+++|.|+-.|+....+..+..+.+..|..-.+.+.+.+.++.
T Consensus 79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~ 120 (326)
T PRK05442 79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA 120 (326)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 889988777664433334788899999999999999998854
No 314
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.37 E-value=0.00062 Score=63.45 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=66.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCCCC-------CC----CCceEEEccCCCHHHHHHHHc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWN-------AD----HLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~~~-------~~----~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
+||.|+||||++|..++..|+. .|+ +|++++|....... .+ ..... ..... .+. +.+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~-----~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d~-~~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAK-----EDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SDL-SDVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CCH-HHhC
Confidence 4899999999999999999998 554 59999995411100 00 00100 11111 112 3488
Q ss_pred cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961 94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR 138 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~ 138 (397)
++|.|+-+++.......+..+..+.|+.-.+.+.+.+.+..++.+
T Consensus 72 ~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~ 116 (309)
T cd05294 72 GSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTK 116 (309)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 899877776543222235577889999999999998887755443
No 315
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.30 E-value=0.0014 Score=61.24 Aligned_cols=108 Identities=15% Similarity=0.095 Sum_probs=68.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCC--CC-----CCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKP--NW-----NADHLVEYVQCDVSDPEETQAKLSQLTD 97 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~--~~-----~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 97 (397)
-||.|+||+|++|+.++..|...+... ...+++.++..... .. ..+... ....+..-.....+.++++|.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~~~~~~~i~~~~~~~~~daDv 82 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAF-PLLAGVVATTDPEEAFKDVDA 82 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccc-cccCCcEEecChHHHhCCCCE
Confidence 589999999999999999998621110 11178888885421 10 000000 000011000123466889998
Q ss_pred eeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961 98 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP 135 (397)
Q Consensus 98 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~ 135 (397)
|+..|+....+..+..+.+..|..-.+.+.+.+.++++
T Consensus 83 VVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~ 120 (323)
T TIGR01759 83 ALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK 120 (323)
T ss_pred EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 88887754333447888999999999999999998765
No 316
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.26 E-value=0.00039 Score=63.69 Aligned_cols=77 Identities=12% Similarity=0.011 Sum_probs=57.1
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
-++|.|||||.|.++++++.+.... .+..+-+..|+..+- ..+.+...++.+|..|++++.+..+.+.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~-~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVF-EGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcc-cCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence 4899999999999999999873222 466677777764321 0011233389999999999999999999
Q ss_pred CeeEEEEec
Q 015961 97 DVTHIFYVT 105 (397)
Q Consensus 97 ~V~h~a~~~ 105 (397)
.|+++++.-
T Consensus 86 vivN~vGPy 94 (423)
T KOG2733|consen 86 VIVNCVGPY 94 (423)
T ss_pred EEEeccccc
Confidence 899997753
No 317
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.19 E-value=0.00021 Score=58.61 Aligned_cols=100 Identities=19% Similarity=0.140 Sum_probs=73.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCCCCCceEEEccCCCHHHHHHHHcc------
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ------ 94 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~l~~~~~~------ 94 (397)
.+.-.|||||..-+|...++.|.+ +|..|..++-..++. ..-..++-+...|+++.++++.++..
T Consensus 8 kglvalvtggasglg~ataerlak-----qgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAK-----QGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHh-----cCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 345679999999999999999999 899999999765432 11124678999999999988877654
Q ss_pred -CCCeeEEEEecccCC-----C-------cHHHHHHhHHHHHHHHHHH
Q 015961 95 -LTDVTHIFYVTWTNR-----S-------TEAENCKINGSMFRNVLRA 129 (397)
Q Consensus 95 -~~~V~h~a~~~~~~~-----~-------~~~~~~~~nv~gt~~ll~a 129 (397)
.|..++||+.+.... . +.+..+++|+.||-|++..
T Consensus 83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl 130 (260)
T KOG1199|consen 83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRL 130 (260)
T ss_pred ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeee
Confidence 456788877644211 0 3344567899999887653
No 318
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.16 E-value=0.0022 Score=59.51 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=71.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----CCCC-CCceEEEccCCCHHHHHHHHccCCCee
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----WNAD-HLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
+||.|+||+|++|+.++..|.. ++ .++++++...... +... ....+.... ..+++.+.++++|.|+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~-----~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivv 73 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKL-----NPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVV 73 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEE
Confidence 3799999999999999999987 44 3788888761111 0000 111111110 1122456788999888
Q ss_pred EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
-.|+....+..+..+.++.|..-.+.+.+.+.+++++...++
T Consensus 74 itaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~viv 115 (310)
T cd01337 74 IPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILI 115 (310)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 777654333447888999999999999999998866554443
No 319
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.07 E-value=0.003 Score=58.76 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=70.6
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----CCC-CCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
||.|+||+|.||+.++..|..... ..++.++++.+... +.. .....+.... +.+++.+.++++|.|+-.|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~---~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY---VSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC---CcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence 589999999999999999987321 23799998865211 000 0111111101 1112456789999888877
Q ss_pred EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961 103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV 140 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~ 140 (397)
+....+..+..+....|..-.+.+.+.+.+.+++...+
T Consensus 76 G~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iii 113 (312)
T TIGR01772 76 GVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMIL 113 (312)
T ss_pred CCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEE
Confidence 65433344778889999999999999998876554433
No 320
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.04 E-value=0.0078 Score=56.23 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=69.9
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHc
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
++||.|+|| |.+|+.++..|.. .+. +++.+++..... .....++.+... + .+.++
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~-----~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~----~~~~~ 72 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVN-----QGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D----YSDCK 72 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C----HHHhC
Confidence 469999997 9999999999987 454 799999865421 000012333222 2 24578
Q ss_pred cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 015961 94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH 139 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~ 139 (397)
++|.|+-.|+....+..+..+.+..|+.-.+.+++.+++.++....
T Consensus 73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~v 118 (315)
T PRK00066 73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIF 118 (315)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 9998887776543333467888999999999999999887654443
No 321
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.02 E-value=0.0014 Score=62.01 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=51.6
Q ss_pred CCEEEEEcCCChhHHH--HHHHccCCCCCCCCcEEEEEeCCCC--C-C--------------CCCC--CCceEEEccCCC
Q 015961 26 QSVALIVGVTGIVGNS--LAEILPLPDTPGGPWKVYGVARRPK--P-N--------------WNAD--HLVEYVQCDVSD 84 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~--lv~~L~~~~~~~~g~~V~~l~R~~~--~-~--------------~~~~--~~v~~~~~Dl~d 84 (397)
+|++|||||++-+|.+ +++.| + .|.+|+++++... . . .... ..+..+.+|+++
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss 114 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS 114 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC
Confidence 5899999999999999 89999 7 7999888885321 1 0 0011 134578999999
Q ss_pred HHHHHHHHc-------cCCCeeEEEEe
Q 015961 85 PEETQAKLS-------QLTDVTHIFYV 104 (397)
Q Consensus 85 ~~~l~~~~~-------~~~~V~h~a~~ 104 (397)
.+++.++++ .+|.++|.++.
T Consensus 115 ~E~v~~lie~I~e~~G~IDiLVnSaA~ 141 (398)
T PRK13656 115 DEIKQKVIELIKQDLGQVDLVVYSLAS 141 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCcc
Confidence 977655443 36667777653
No 322
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.95 E-value=0.0012 Score=56.43 Aligned_cols=65 Identities=15% Similarity=0.098 Sum_probs=39.5
Q ss_pred CCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCH--HHHHHHHccCCCeeEEEEec
Q 015961 34 VTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTDVTHIFYVT 105 (397)
Q Consensus 34 atGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~~~V~h~a~~~ 105 (397)
.||-.|..|++++.. .|++|+.+.....-. .+.+++.+...-.+. +.+.+.+..+|.++|+|+.+
T Consensus 27 SSG~~G~~lA~~~~~-----~Ga~V~li~g~~~~~--~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs 93 (185)
T PF04127_consen 27 SSGKMGAALAEEAAR-----RGAEVTLIHGPSSLP--PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVS 93 (185)
T ss_dssp --SHHHHHHHHHHHH-----TT-EEEEEE-TTS------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred CcCHHHHHHHHHHHH-----CCCEEEEEecCcccc--ccccceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence 489999999999999 899999999874211 224677666543221 34555667788889987653
No 323
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=96.90 E-value=0.0063 Score=59.03 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=71.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCC--CCc--EEEEEeCCCCCCC-----------CCCCCceEEEccCCCHHHHHH
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPW--KVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQA 90 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~--~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~l~~ 90 (397)
.-||.|+||+|++|++++..|....-.. ++. +++.+++...... .....+.+..+ + .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence 3589999999999999999998721000 143 6888887654320 00112221122 2 35
Q ss_pred HHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcc-cCCCcceEE
Q 015961 91 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIP-NAPNLRHVC 141 (397)
Q Consensus 91 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~~~~ 141 (397)
.++++|.|+-.|+....+..+..+..+.|+.-.+.+.+.+.+ ++++.+.++
T Consensus 173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIV 224 (444)
T PLN00112 173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIV 224 (444)
T ss_pred HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 678899877776643333347888999999999999999998 565555444
No 324
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.89 E-value=0.0027 Score=60.87 Aligned_cols=74 Identities=20% Similarity=0.016 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHH
Q 015961 23 RSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE 86 (397)
Q Consensus 23 ~~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~ 86 (397)
+..+++|||||| ||.+|..++++|.. .|++|+++.+...... ... ....|+.+.+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~-----~Ga~V~~~~g~~~~~~--~~~--~~~~~v~~~~ 252 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYK-----RGADVTLITGPVSLLT--PPG--VKSIKVSTAE 252 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHH-----CCCEEEEeCCCCccCC--CCC--cEEEEeccHH
Confidence 356789999999 47899999999999 8999999887653321 122 3568888887
Q ss_pred HH-HHHH----ccCCCeeEEEEec
Q 015961 87 ET-QAKL----SQLTDVTHIFYVT 105 (397)
Q Consensus 87 ~l-~~~~----~~~~~V~h~a~~~ 105 (397)
++ +..+ ..+|.+++.|+.+
T Consensus 253 ~~~~~~~~~~~~~~D~~i~~Aavs 276 (390)
T TIGR00521 253 EMLEAALNELAKDFDIFISAAAVA 276 (390)
T ss_pred HHHHHHHHhhcccCCEEEEccccc
Confidence 76 4344 3467788887753
No 325
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.87 E-value=0.0011 Score=63.37 Aligned_cols=101 Identities=9% Similarity=0.165 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCC-CCCCceEEEccCCCHHHHHH-HHccCCCeeEEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQA-KLSQLTDVTHIF 102 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~l~~-~~~~~~~V~h~a 102 (397)
++++|.|.||||++|..|++.|.++ ..++|+.+.++...... .........+|+.+.++++. .++++|.||-+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h----P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Al 112 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH----PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCL 112 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC----CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcC
Confidence 5579999999999999999999984 36689999875432110 00111222345443333322 257777555431
Q ss_pred EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecCCccc
Q 015961 103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY 149 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y 149 (397)
. . ....+++.++. .+ .+++..|+...+
T Consensus 113 p----~------------~~s~~i~~~~~-~g---~~VIDlSs~fRl 139 (381)
T PLN02968 113 P----H------------GTTQEIIKALP-KD---LKIVDLSADFRL 139 (381)
T ss_pred C----H------------HHHHHHHHHHh-CC---CEEEEcCchhcc
Confidence 1 0 13344555553 22 457777765544
No 326
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.82 E-value=0.012 Score=54.91 Aligned_cols=99 Identities=13% Similarity=0.043 Sum_probs=69.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCCCC-----------CCCCceEEEccCCCHHHHHHHHc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNWN-----------ADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~~~-----------~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
++|.|.| +|.+|+.++..|+. .| ++|++++|.+..... ....+.+.. .+. +.+.
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~-----~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~ 67 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVN-----QGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCK 67 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhC
Confidence 4799999 59999999999987 56 589999997643210 011122221 122 3468
Q ss_pred cCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961 94 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR 138 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~ 138 (397)
++|.|+.+++....+..+..+.++.|..-.+.+.+.++++++...
T Consensus 68 ~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~ 112 (306)
T cd05291 68 DADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGI 112 (306)
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 899888886644333346788899999999999999998866543
No 327
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.0018 Score=58.97 Aligned_cols=78 Identities=19% Similarity=0.052 Sum_probs=56.3
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC--CCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
++.|...++|-|||||.|..++++|.+ +|.+-....|+..+-. ...-+.++-..++.++..+++.+...+.|+
T Consensus 2 ~~e~e~d~iiYGAtGy~G~lvae~l~~-----~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl 76 (382)
T COG3268 2 PMEREYDIIIYGATGYAGGLVAEYLAR-----EGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL 76 (382)
T ss_pred CCCcceeEEEEccccchhHHHHHHHHH-----cCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence 455667899999999999999999998 6777766667653310 000123333445555888999999999999
Q ss_pred EEEEe
Q 015961 100 HIFYV 104 (397)
Q Consensus 100 h~a~~ 104 (397)
|+++.
T Consensus 77 ncvGP 81 (382)
T COG3268 77 NCVGP 81 (382)
T ss_pred ecccc
Confidence 99874
No 328
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.70 E-value=0.0022 Score=56.87 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=42.8
Q ss_pred cCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHH-------HccCCCeeEEEEe
Q 015961 33 GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-------LSQLTDVTHIFYV 104 (397)
Q Consensus 33 GatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-------~~~~~~V~h~a~~ 104 (397)
.++|.||.+++++|.+ +|++|+++++..... . . ....+|+.+.+++.+. +..+|.++|.|+.
T Consensus 22 ~SSGgIG~AIA~~la~-----~Ga~Vvlv~~~~~l~--~-~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv 90 (227)
T TIGR02114 22 HSTGHLGKIITETFLS-----AGHEVTLVTTKRALK--P-E--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV 90 (227)
T ss_pred CcccHHHHHHHHHHHH-----CCCEEEEEcChhhcc--c-c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence 4599999999999999 899999987642111 0 0 1235788887655443 2346778888774
No 329
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.57 E-value=0.0068 Score=52.47 Aligned_cols=113 Identities=13% Similarity=0.059 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE--EEEEeCCCCCCCCCCCCceEEEc--------cCCCHHHHHHHHc
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK--VYGVARRPKPNWNADHLVEYVQC--------DVSDPEETQAKLS 93 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~--V~~l~R~~~~~~~~~~~v~~~~~--------Dl~d~~~l~~~~~ 93 (397)
.|.+-|||||++.-||..++..+.. .+.+ +++..|.... ..++....| |++....+.+..+
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~a-----ed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e 74 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILA-----EDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALRE 74 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHh-----cchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHh
Confidence 4667899999999999998888876 3444 5555554322 134444444 4443333333222
Q ss_pred c-------CCCeeEEEEecccCC-------C--cHHHHHHhHHHHHHHHHHHHccc-CCC--cceEEEecC
Q 015961 94 Q-------LTDVTHIFYVTWTNR-------S--TEAENCKINGSMFRNVLRAVIPN-APN--LRHVCLQTG 145 (397)
Q Consensus 94 ~-------~~~V~h~a~~~~~~~-------~--~~~~~~~~nv~gt~~ll~a~~~~-~~~--~~~~~~~s~ 145 (397)
. -+.|+|-|+...... + ..+.+++.|+.+...|...+... ... -+.++.+||
T Consensus 75 ~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS 145 (253)
T KOG1204|consen 75 APRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSS 145 (253)
T ss_pred hhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecc
Confidence 1 234888877533211 1 45678899999988887755443 111 245555553
No 330
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.56 E-value=0.025 Score=55.00 Aligned_cols=106 Identities=7% Similarity=-0.063 Sum_probs=68.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCC--CCcEEEEEeCCCCCC-------------CCCCCCceEEEccCCCHHH
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEE 87 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~--~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~ 87 (397)
...+-+|+||||+|.||.+|+..|.+-.-.+ +-..++.++...... .+....+.+.. |
T Consensus 120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~------ 192 (452)
T cd05295 120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D------ 192 (452)
T ss_pred CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C------
Confidence 3344689999999999999999998732211 112355555531111 01111233322 1
Q ss_pred HHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961 88 TQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP 135 (397)
Q Consensus 88 l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~ 135 (397)
..+.++++|.|+-+++.......+..+..+.|..-.+.+.+++.+..+
T Consensus 193 ~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~ 240 (452)
T cd05295 193 LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAK 240 (452)
T ss_pred CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 146789999888776643333347888899999999999999988754
No 331
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.55 E-value=0.0092 Score=56.50 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
|+++|+|.||||++|..+++.|.+. .+++++++.++
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~----p~~elv~v~~~ 36 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNH----PEVEIVAVTSR 36 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcC----CCceEEEEECc
Confidence 3479999999999999999999874 46788777764
No 332
>PLN02602 lactate dehydrogenase
Probab=96.51 E-value=0.031 Score=52.89 Aligned_cols=105 Identities=15% Similarity=0.092 Sum_probs=68.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC------CC----CCCCceEEEccCCCHHHHHHHHccCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN----ADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~------~~----~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
+||.|+|+ |.+|+.++..|+..+.. .+++.++...... +. ......+ .++ .|. +.++++|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~---~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy----~~~~daD 107 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLA---DELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDY----AVTAGSD 107 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC---CEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCH----HHhCCCC
Confidence 59999995 99999999999873322 2799999865322 00 0112222 211 122 3478899
Q ss_pred CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
.|+-.|+....+..+..+.+..|+.-.+.+.+.+++++++...++
T Consensus 108 iVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~iviv 152 (350)
T PLN02602 108 LCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLI 152 (350)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 877776643333336788899999999999999988765544333
No 333
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.49 E-value=0.014 Score=53.75 Aligned_cols=105 Identities=18% Similarity=0.129 Sum_probs=69.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------C-----CCCCceEEEccCCCHHHHHHHHccC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------N-----ADHLVEYVQCDVSDPEETQAKLSQL 95 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~-----~~~~v~~~~~Dl~d~~~l~~~~~~~ 95 (397)
+||.|+|| |+||+.++-.|+... -+.+++.++....... . .... ..+.+| .+ .+.++++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~---~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQG---LGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGA 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccc---ccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCC
Confidence 47999998 999999999997632 1337999998732210 0 0001 122222 12 3457888
Q ss_pred CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
|.|+-.|+...-+.....+.++.|..-.+.+.+++.+.++....++
T Consensus 71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlV 116 (313)
T COG0039 71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLV 116 (313)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEE
Confidence 8777776544333347889999999999999999988765444443
No 334
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.46 E-value=0.0034 Score=55.67 Aligned_cols=68 Identities=21% Similarity=0.203 Sum_probs=53.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAK-LSQLTDVTH 100 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h 100 (397)
|+++|.| .|-+|+.+++.|.+ .||+|+++++++.... ........+.+|-+|++.|+++ +..+|.++-
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~-----~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva 72 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSE-----EGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVA 72 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHh-----CCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence 4788988 69999999999999 8999999999865421 1124678899999999998876 565664433
No 335
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.44 E-value=0.0075 Score=55.68 Aligned_cols=71 Identities=11% Similarity=0.055 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC---CCC------CC-CCCCceEEEccCCCHHHHHHHHc
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP---KPN------WN-ADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~---~~~------~~-~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
.+++++|||| |-+|++++..|.+ .|++ |++++|+. .+. +. ....+.+..+|+.+.+++...+.
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~-----~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~ 198 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCAL-----DGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA 198 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc
Confidence 4578999997 8999999999998 7876 99999975 111 00 01234456688888777777777
Q ss_pred cCCCeeEE
Q 015961 94 QLTDVTHI 101 (397)
Q Consensus 94 ~~~~V~h~ 101 (397)
.+|.|+++
T Consensus 199 ~~DilINa 206 (289)
T PRK12548 199 SSDILVNA 206 (289)
T ss_pred cCCEEEEe
Confidence 77777765
No 336
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.40 E-value=0.02 Score=54.61 Aligned_cols=102 Identities=16% Similarity=0.045 Sum_probs=64.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE--EEEE--eCCCCCC----------C-CCCCCceEEEccCCCHHHHHH
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK--VYGV--ARRPKPN----------W-NADHLVEYVQCDVSDPEETQA 90 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~--V~~l--~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~l~~ 90 (397)
.-||.|+||+|++|++++-.|..........+ ++.+ ++..+.. . +...++.+..+| .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~-------y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP-------YE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC-------HH
Confidence 46999999999999999999986322111112 3333 4443221 0 001122222222 35
Q ss_pred HHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccC
Q 015961 91 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA 134 (397)
Q Consensus 91 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 134 (397)
.++++|.|+-.|+....+..+..+.+..|+.-.+.+.+.+.++.
T Consensus 117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a 160 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVA 160 (387)
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 68889987777665433334788899999999999999998853
No 337
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.38 E-value=0.039 Score=51.31 Aligned_cols=100 Identities=8% Similarity=0.020 Sum_probs=67.8
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCC-CCCceEEEccCCCHHHHHHHHccC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNA-DHLVEYVQCDVSDPEETQAKLSQL 95 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~-~~~v~~~~~Dl~d~~~l~~~~~~~ 95 (397)
||.|.|+ |++|+.++..|+..+.. -+++.++...... .+. ...+++..+| .+.++++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~---~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~a 69 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLF---SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADA 69 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCC
Confidence 5889997 99999999999873222 2799999864321 001 1134444333 3567889
Q ss_pred CCeeEEEEecccCCCc--HHHHHHhHHHHHHHHHHHHcccCCCcc
Q 015961 96 TDVTHIFYVTWTNRST--EAENCKINGSMFRNVLRAVIPNAPNLR 138 (397)
Q Consensus 96 ~~V~h~a~~~~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~~~~~ 138 (397)
|.|+-.|+....+..+ ..+.+..|..-.+.+.+.+.+++++..
T Consensus 70 DivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i 114 (307)
T cd05290 70 DIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAV 114 (307)
T ss_pred CEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 9877776643322223 588899999999999999998875544
No 338
>PRK04148 hypothetical protein; Provisional
Probab=96.36 E-value=0.0045 Score=49.53 Aligned_cols=67 Identities=13% Similarity=0.046 Sum_probs=50.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
+++|++.| +| .|.+++..|.+ .|++|++++.++... ......++++.+|+.+++- +..+++|.|+-+
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~~-----~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysi 84 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLKE-----SGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSI 84 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEe
Confidence 46899999 78 88899999998 899999999886532 1122467899999998863 456777755554
No 339
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.32 E-value=0.0043 Score=61.30 Aligned_cols=69 Identities=22% Similarity=0.151 Sum_probs=53.2
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHH-HccCCCeeEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI 101 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h~ 101 (397)
|+|+|+|+ |.+|.++++.|.+ +|++|+++++++... .....+++++.+|.++...+..+ +.+++.|+-+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~-----~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~ 72 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSG-----ENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAV 72 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-----CCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence 47999996 9999999999998 799999999876431 11114688999999999888776 6667654443
No 340
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.30 E-value=0.041 Score=51.29 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=68.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceEEE-ccCCCHHHHHHHHccC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQ-CDVSDPEETQAKLSQL 95 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~-~Dl~d~~~l~~~~~~~ 95 (397)
.||.|+|+ |++|+.++..|..... .-+++.++...... ........+.. +| . +.++++
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~---~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~d---y----~~~~~a 72 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGL---ADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKD---Y----SVTANS 72 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC---CCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCC---H----HHhCCC
Confidence 58999995 9999999999886322 23799998765321 00001112222 22 2 237888
Q ss_pred CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
|.|+-.|+...-+..+..+.+..|+.-.+.+.+.+++++++...++
T Consensus 73 divvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~viv 118 (312)
T cd05293 73 KVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLV 118 (312)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 8777766643333336788899999999999999998865554333
No 341
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=96.21 E-value=0.0089 Score=52.50 Aligned_cols=79 Identities=20% Similarity=0.181 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---------CCC--CCCceEEEccCCCHHHHHHH--
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNA--DHLVEYVQCDVSDPEETQAK-- 91 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~--~~~v~~~~~Dl~d~~~l~~~-- 91 (397)
|.|-+||||++.-+|-.++.+|++....+.-..|+...|.-+++ ... .-.++++.+|+++..++.++
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 55778999999999999999998732111123355556754332 112 23577999999998765444
Q ss_pred -----HccCCCeeEEEE
Q 015961 92 -----LSQLTDVTHIFY 103 (397)
Q Consensus 92 -----~~~~~~V~h~a~ 103 (397)
++..|.|+--|+
T Consensus 82 di~~rf~~ld~iylNAg 98 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAG 98 (341)
T ss_pred HHHHHhhhccEEEEccc
Confidence 444554544443
No 342
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.16 E-value=0.012 Score=46.78 Aligned_cols=68 Identities=21% Similarity=0.307 Sum_probs=39.7
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCCCCCCCCCC----CCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPNWNAD----HLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
||.|.|++|-+|+.+++.+.+. .++++.+. +|++....-.+ .+.. ...+.-.+++++.+..+|.|+.+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~----~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILES----PGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS----TTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhc----CCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEc
Confidence 7999999999999999999875 68885555 55542211000 0000 11111114566777778866665
No 343
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.14 E-value=0.0063 Score=48.29 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=26.8
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEE-EEeCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVY-GVARRP 65 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~-~l~R~~ 65 (397)
||.|+||||++|+.|++.|.++ ..+++. ++.++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h----p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH----PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT----STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC----CCccEEEeeeecc
Confidence 6999999999999999999985 355644 445544
No 344
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.10 E-value=0.02 Score=51.87 Aligned_cols=65 Identities=15% Similarity=0.190 Sum_probs=41.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
.+|.|+|++|.+|+.+++.+.+. .+++++++. +.+..... . -..++...+++.++++++|.|+++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~----~~~elvav~d~~~~~~~~----~--~~~~i~~~~dl~~ll~~~DvVid~ 67 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA----EDLELVAAVDRPGSPLVG----Q--GALGVAITDDLEAVLADADVLIDF 67 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecCCccccc----c--CCCCccccCCHHHhccCCCEEEEC
Confidence 58999999999999999998763 467876655 44322210 0 122333334455666677766665
No 345
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.10 E-value=0.013 Score=55.40 Aligned_cols=65 Identities=20% Similarity=0.118 Sum_probs=41.2
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCc---EEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~---~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
++|+|.||||++|..|++.|.+ .+| ++..+.+...... ....+.+....|+.+. .+.++|.||-+
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~-----~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A 70 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEE-----RNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFS 70 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEEC
Confidence 5899999999999999999987 444 5677877543211 1112334444555431 34577765543
No 346
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.07 E-value=0.014 Score=53.24 Aligned_cols=108 Identities=16% Similarity=0.060 Sum_probs=69.2
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCC----cEEEEEeCCCCCCCC---CCCC-ceEE-EccCCCHHHHHHHHccCCCee
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGP----WKVYGVARRPKPNWN---ADHL-VEYV-QCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g----~~V~~l~R~~~~~~~---~~~~-v~~~-~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
|.|+||+|.+|..++..|+. .+ .+|+++++....... .... .... ...+.-.+++.++++++|.|+
T Consensus 1 I~IIGagG~vG~~ia~~l~~-----~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv 75 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLAD-----GSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVI 75 (263)
T ss_pred CEEECCCChHHHHHHHHHHh-----CCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEE
Confidence 57899999999999999987 45 689999986533200 0000 0000 111111123457789999877
Q ss_pred EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
-.++..........+....|+.-.+.+.+.+++.+++...++
T Consensus 76 ~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~ 117 (263)
T cd00650 76 ITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIV 117 (263)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 765543333335667788899999999999998765554443
No 347
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.06 E-value=0.0062 Score=65.01 Aligned_cols=75 Identities=29% Similarity=0.186 Sum_probs=53.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCC---------CCcEEEEEeCCCCCCC---CCCCCceEEEccCCCHHHHHHHHc
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPG---------GPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~---------~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~ 93 (397)
+++|+|.|| |++|+..++.|.+.+... ....|++.++...... ...++++.+..|+.|.+++.++++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 478999995 999999999998743210 0123666676543210 012467889999999999999889
Q ss_pred cCCCeeEE
Q 015961 94 QLTDVTHI 101 (397)
Q Consensus 94 ~~~~V~h~ 101 (397)
++|.|+.+
T Consensus 648 ~~DaVIsa 655 (1042)
T PLN02819 648 QVDVVISL 655 (1042)
T ss_pred CCCEEEEC
Confidence 98877776
No 348
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.05 E-value=0.039 Score=49.24 Aligned_cols=108 Identities=15% Similarity=0.113 Sum_probs=68.3
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
..||.|.||.|-||+.|.-.|..+|.++ +....+-...+- ...+-+-.......+-.+.+.+++.++|.|+-=|
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLlK~np~Vs---~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPA 104 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLLKLNPLVS---ELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPA 104 (345)
T ss_pred cceEEEEecCCccCccHHHHHhcCcccc---eeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecC
Confidence 3589999999999999988777665554 333333221110 0000011112233333568999999999766554
Q ss_pred EecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961 103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 136 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 136 (397)
+...-+.=..++.|++|..-.+.|..++.+.+++
T Consensus 105 GVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~ 138 (345)
T KOG1494|consen 105 GVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPN 138 (345)
T ss_pred CCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCcc
Confidence 4322222268999999999999999999887543
No 349
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.03 E-value=0.051 Score=48.75 Aligned_cols=91 Identities=16% Similarity=0.027 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHcc--CCCeeEEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF 102 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~a 102 (397)
|.++|||.|||+ =|+.|++.|.+ .|++|++.+-..... .....+.++.|-+.+.+.+.+.++. ++.|+..
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~-----~g~~v~~Svat~~g~-~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA- 72 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAA-----AGVDIVLSLAGRTGG-PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDA- 72 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHh-----CCCeEEEEEccCCCC-cccCCceEEECCCCCHHHHHHHHHHCCCCEEEEC-
Confidence 457899999987 58999999988 788866655433222 2335778888998899999998875 4446665
Q ss_pred EecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961 103 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP 135 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~ 135 (397)
+++.. ..-++|+.++|++.+.
T Consensus 73 --THPfA----------~~is~~a~~ac~~~~i 93 (248)
T PRK08057 73 --THPYA----------AQISANAAAACRALGI 93 (248)
T ss_pred --CCccH----------HHHHHHHHHHHHHhCC
Confidence 22211 1345678899998753
No 350
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.83 E-value=0.027 Score=52.77 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=66.2
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCCC---------CCCCce-EEEccCCCHHHHHHHHcc
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWN---------ADHLVE-YVQCDVSDPEETQAKLSQ 94 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~---------~~~~v~-~~~~Dl~d~~~l~~~~~~ 94 (397)
.+||.|+|| |.+|+.++..|.. .| .+|+.++++...... ...+.. .+.+ ..+.+ .+++
T Consensus 5 ~~KI~IIGa-G~vG~~ia~~l~~-----~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~~ 73 (319)
T PTZ00117 5 RKKISMIGA-GQIGSTVALLILQ-----KNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG----TNNYE-DIKD 73 (319)
T ss_pred CcEEEEECC-CHHHHHHHHHHHH-----CCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe----CCCHH-HhCC
Confidence 358999996 9999999998887 55 579999986532100 000110 1111 11233 6788
Q ss_pred CCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961 95 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL 137 (397)
Q Consensus 95 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~ 137 (397)
+|.|+-.++..........+....|..-.+.+.+.+.+.+++.
T Consensus 74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a 116 (319)
T PTZ00117 74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNA 116 (319)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 9987777654333333667788899998999999888876544
No 351
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.67 E-value=0.091 Score=49.01 Aligned_cols=97 Identities=21% Similarity=0.152 Sum_probs=65.6
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC------CCC----CCCceEEEccCCCHHHHHHHHccC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN------WNA----DHLVEYVQCDVSDPEETQAKLSQL 95 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~------~~~----~~~v~~~~~Dl~d~~~l~~~~~~~ 95 (397)
+|.|.|+ |.+|+.++..|.. .| .+|++++++.... +.. .....+..+ |. +.++++
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~-----~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d~----~~l~~a 68 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLL-----RGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---DY----ADCKGA 68 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHH-----cCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---CH----HHhCCC
Confidence 7999996 9999999999988 56 5899999875321 000 011222222 22 347889
Q ss_pred CCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961 96 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL 137 (397)
Q Consensus 96 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~ 137 (397)
|.|+-+++.......+..+....|+.-.+.+.+.+++.+++.
T Consensus 69 DiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~g 110 (308)
T cd05292 69 DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDA 110 (308)
T ss_pred CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 877777654333333667778899999999999888876543
No 352
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.59 E-value=0.032 Score=52.08 Aligned_cols=103 Identities=19% Similarity=0.190 Sum_probs=63.2
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC-----CCCC-CceEEEccCCCHHHHHHHHccCCCee
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----NADH-LVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~-----~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
+||.|+|| |.+|+.++..|.. .|. +|+++++.+.... ..+. ......+.+....+. +.++++|.|+
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~-----~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVi 75 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLAL-----KELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVV 75 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEE
Confidence 68999997 9999999999987 554 8999998653220 0000 000000111101112 3478888777
Q ss_pred EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961 100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 136 (397)
Q Consensus 100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 136 (397)
..++.......+..+....|+.-.+.+++.+.+..++
T Consensus 76 i~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~ 112 (307)
T PRK06223 76 ITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPD 112 (307)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 6654322222255677788999988898888876544
No 353
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.58 E-value=0.018 Score=54.76 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
|+.+|+|+||||++|+.|++.|.+. ...+++++.++.
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~----p~~el~~~~~s~ 38 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANH----PWFEVTALAASE 38 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcC----CCceEEEEEcCh
Confidence 4579999999999999999999974 345888885543
No 354
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=95.48 E-value=0.023 Score=49.53 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=55.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceE----------EEccCCCHHHHHHHHccCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEY----------VQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~----------~~~Dl~d~~~l~~~~~~~~ 96 (397)
-+||||||+|.||.+|+..+.+-.-.+....|+..--+........+++.. ...+.+. +...++++++
T Consensus 5 irVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvatt--d~~~afkdv~ 82 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATT--DEVEAFKDVD 82 (332)
T ss_pred eEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhccc--ChhhhhccCc
Confidence 489999999999999999998621111111222222211110000011110 0111111 1234667776
Q ss_pred CeeEEEEecccCCC--cHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 015961 97 DVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNA-PNLRHVC 141 (397)
Q Consensus 97 ~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~ 141 (397)
..+-+.+. +... ...+....|+.-.+.=-.|+.++. +.++.++
T Consensus 83 ~ailvGa~--PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlV 128 (332)
T KOG1496|consen 83 VAILVGAM--PRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLV 128 (332)
T ss_pred EEEEeccc--cCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEE
Confidence 55555332 2222 567788888877665555555542 3344443
No 355
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=95.45 E-value=0.044 Score=51.02 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=63.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC-----CCCCC-ceEEEccCCCHHHHHHHHccCCCee
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----NADHL-VEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~-----~~~~~-v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
+||.|.|+ |++|+.++..|+. .|+ +|++++....... ...+. .....+.+.-..+..+ +.++|.|+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~-----~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVI 74 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAE-----KELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVV 74 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHH-----cCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEE
Confidence 58999995 9999999999987 565 8999998543210 00000 0000011110111223 67788766
Q ss_pred EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961 100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL 137 (397)
Q Consensus 100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~ 137 (397)
-.++.......+..+....|..-.+.+++.+.++.++.
T Consensus 75 itag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~ 112 (305)
T TIGR01763 75 ITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNP 112 (305)
T ss_pred EcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 66553222222566788899999999999888875443
No 356
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.17 E-value=0.015 Score=59.00 Aligned_cols=68 Identities=21% Similarity=0.115 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLT 96 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~ 96 (397)
+.++.+|+|.| .|-+|++++++|.+ +|++|++++++++.. ...+.+++.+.||.+|++.++++ ++++|
T Consensus 414 ~~~~~hiiI~G-~G~~G~~la~~L~~-----~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~ 483 (558)
T PRK10669 414 VDICNHALLVG-YGRVGSLLGEKLLA-----AGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCAR 483 (558)
T ss_pred cccCCCEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccC
Confidence 35567999999 79999999999998 799999999876432 11235788999999999887653 34444
No 357
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.10 E-value=0.043 Score=52.67 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
..++|.|.||+|.+|+.++..|.+ .|++|++.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~-----~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTL-----SGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHH-----CCCeEEEeCCC
Confidence 447899999999999999999998 79999999985
No 358
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=95.08 E-value=0.24 Score=46.49 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=65.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC-----------CCCCCceEEE-ccCCCHHHHHHHHc
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----------NADHLVEYVQ-CDVSDPEETQAKLS 93 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~-----------~~~~~v~~~~-~Dl~d~~~l~~~~~ 93 (397)
+||.|.| +|.+|+.++..|+. .|. +|+.++.++.... ......++.. .| . +.++
T Consensus 7 ~KI~IIG-aG~vG~~ia~~la~-----~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d------~-~~l~ 73 (321)
T PTZ00082 7 RKISLIG-SGNIGGVMAYLIVL-----KNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN------Y-EDIA 73 (321)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-----CCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC------H-HHhC
Confidence 5899999 69999999998887 564 7999998765220 0001122221 22 2 3578
Q ss_pred cCCCeeEEEEecccCCC-----cHHHHHHhHHHHHHHHHHHHcccCCCc
Q 015961 94 QLTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNL 137 (397)
Q Consensus 94 ~~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~ 137 (397)
++|.|+..++....+.. +..+.+..|+.-.+.+++.+.+.++..
T Consensus 74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a 122 (321)
T PTZ00082 74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNA 122 (321)
T ss_pred CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 99988887654332222 556677889998888999888876544
No 359
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.03 E-value=0.028 Score=49.65 Aligned_cols=35 Identities=26% Similarity=0.151 Sum_probs=31.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
++|.|+||+|.+|+.++..|.+ .|++|++.+|++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~-----~G~~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAK-----AGNKIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCCEEEEEEcCHH
Confidence 3799999999999999999998 7899999998753
No 360
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.02 E-value=0.04 Score=51.20 Aligned_cols=101 Identities=17% Similarity=0.075 Sum_probs=67.8
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
|.|.|+ |.+|+.++-.|+. .| .+++++++..... .......++..+ .| .+.+.++|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~-----~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aD 68 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIA-----KGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADAD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCC
Confidence 468894 9999999999987 45 5899999865421 000011222221 12 24688999
Q ss_pred CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
.|+.+++....+..+..+....|+.-.+.+.+.+++++++...++
T Consensus 69 iVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv 113 (300)
T cd00300 69 IVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILV 113 (300)
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 888887643333346788889999999999999998865554333
No 361
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.93 E-value=0.059 Score=49.95 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
|+.||.|.||+|+.|..|++.|..+| ..+++..+.+
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp----~ve~~~~ss~ 36 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHP----DVELILISSR 36 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCC----CeEEEEeech
Confidence 45789999999999999999999864 4466666543
No 362
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.76 E-value=0.11 Score=48.58 Aligned_cols=64 Identities=23% Similarity=0.195 Sum_probs=46.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 100 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h 100 (397)
...+++|.|.| .|.||+.+++.|.. -|++|++.+|..... +++..+ ....++.++++.+|.|+.
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~a-----fG~~V~~~~~~~~~~----~~~~~~----~~~~~l~e~l~~aDvvv~ 196 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQT-----WGFPLRCWSRSRKSW----PGVQSF----AGREELSAFLSQTRVLIN 196 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCC----CCceee----cccccHHHHHhcCCEEEE
Confidence 34568999999 89999999999998 899999999854321 122211 124467888999986443
No 363
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.74 E-value=0.013 Score=45.99 Aligned_cols=64 Identities=28% Similarity=0.384 Sum_probs=46.2
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCe
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDV 98 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V 98 (397)
|+|.| .|-+|..+++.|.+ .+.+|+++++++... .....++.++.||.+|++.++++ ++.++.|
T Consensus 1 vvI~G-~g~~~~~i~~~L~~-----~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~v 66 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKE-----GGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAV 66 (116)
T ss_dssp EEEES--SHHHHHHHHHHHH-----TTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEE
T ss_pred eEEEc-CCHHHHHHHHHHHh-----CCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEE
Confidence 68889 58999999999998 677999999986431 11124688999999999988663 3444433
No 364
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.73 E-value=0.092 Score=44.14 Aligned_cols=54 Identities=20% Similarity=0.155 Sum_probs=42.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
...+++|||+|+.+.+|..+++.|.+ .|.+|+.+.|.. +++.+.+..+|.|+..
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~-----~g~~V~v~~r~~--------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLN-----RNATVTVCHSKT--------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhh-----CCCEEEEEECCc--------------------hhHHHHHhhCCEEEEc
Confidence 45678999999866789999999998 788899888852 3456788888876665
No 365
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=94.68 E-value=0.046 Score=51.66 Aligned_cols=64 Identities=17% Similarity=0.103 Sum_probs=38.7
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcE---EEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~---V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
+|+|.||||++|..|++.|.+ ++|. +..+.+..... .....+.+....|+. . ..+.++|.|+-+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~-----~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-~----~~~~~~D~v~~a 68 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEE-----RNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-I----ESFEGIDIALFS 68 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHh-----CCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-h----HHhcCCCEEEEC
Confidence 589999999999999999987 4555 34444543221 111123445555653 1 234677754444
No 366
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=94.65 E-value=0.19 Score=46.64 Aligned_cols=99 Identities=14% Similarity=0.015 Sum_probs=65.2
Q ss_pred EEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961 31 IVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 31 VtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
|.| +|.+|+.++..|...+.. -++..++...... ......+++..+ + .+.++++|.|+
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivV 69 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIA---DEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVV 69 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCC---CEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEE
Confidence 457 599999999999873322 2799999865322 001112333222 2 35688899877
Q ss_pred EEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 015961 100 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV 140 (397)
Q Consensus 100 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~ 140 (397)
-.|+....+..+..+.++.|+.-.+.+.+.+++++++...+
T Consensus 70 itag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vi 110 (299)
T TIGR01771 70 ITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFL 110 (299)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 77664333334678889999999999999999876554433
No 367
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=94.65 E-value=0.089 Score=51.61 Aligned_cols=74 Identities=12% Similarity=0.024 Sum_probs=50.6
Q ss_pred cCCCCCEEEEEcC----------------CChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCH
Q 015961 22 ARSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP 85 (397)
Q Consensus 22 ~~~~~~~ILVtGa----------------tGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~ 85 (397)
++..+++||||+| ||-.|..|++.+.. .|++|+.+.-... .....+++++..+ ..
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~-----~GA~VtlI~Gp~~--~~~p~~v~~i~V~--ta 322 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAA-----AGAEVTLISGPVD--LADPQGVKVIHVE--SA 322 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHH-----CCCcEEEEeCCcC--CCCCCCceEEEec--CH
Confidence 3467899999987 79999999999999 8999999874321 1122467766554 34
Q ss_pred HHHHHHHc---cCCCeeEEEEe
Q 015961 86 EETQAKLS---QLTDVTHIFYV 104 (397)
Q Consensus 86 ~~l~~~~~---~~~~V~h~a~~ 104 (397)
+++.+++. ..|.+++.|+.
T Consensus 323 ~eM~~av~~~~~~Di~I~aAAV 344 (475)
T PRK13982 323 RQMLAAVEAALPADIAIFAAAV 344 (475)
T ss_pred HHHHHHHHhhCCCCEEEEeccc
Confidence 44433332 25768887664
No 368
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.64 E-value=0.04 Score=54.39 Aligned_cols=69 Identities=20% Similarity=0.213 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC-CCCCceEEEccCCCHHHHHHH-HccCCCee
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAK-LSQLTDVT 99 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~ 99 (397)
.+++|+|.|+ |.+|..+++.|.+ .|++|+++++++... .. ...++.++.||.++++.+.++ +.+++.|+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~-----~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi 302 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEK-----EGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFI 302 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence 4578999995 9999999999998 799999999876431 10 113678899999999887543 34455443
No 369
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.61 E-value=0.045 Score=51.92 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=27.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE-eCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARR 64 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l-~R~ 64 (397)
++|.|.||||++|..+++.|.+. .+++++.+ +++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h----P~~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH----PEVEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC----CCceEEEEeccc
Confidence 47999999999999999999975 36677744 543
No 370
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.52 E-value=0.033 Score=54.99 Aligned_cols=67 Identities=19% Similarity=0.077 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC------CCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
++|+|+|+|+++ +|..+++.|++ .|++|++.++...... ....+++++.+|..+ +...++|.|
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~-----~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKK-----LGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLV 72 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEE
Confidence 358999999877 99999999999 8999999998642211 112357788888765 234567767
Q ss_pred eEEE
Q 015961 99 THIF 102 (397)
Q Consensus 99 ~h~a 102 (397)
++.+
T Consensus 73 v~~~ 76 (450)
T PRK14106 73 VVSP 76 (450)
T ss_pred EECC
Confidence 6653
No 371
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.38 E-value=0.074 Score=54.44 Aligned_cols=70 Identities=14% Similarity=0.113 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH 100 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h 100 (397)
.+.+|+|.| .|-+|+.+++.|.+ .|++++++++++... .....+..++.||.+|++.++++ +.+++.|+-
T Consensus 399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~ 470 (601)
T PRK03659 399 DKPQVIIVG-FGRFGQVIGRLLMA-----NKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVI 470 (601)
T ss_pred ccCCEEEec-CchHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEE
Confidence 346899999 79999999999998 799999999886532 11224678999999999988663 444554333
No 372
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=94.27 E-value=0.17 Score=48.97 Aligned_cols=68 Identities=15% Similarity=0.097 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCee
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT 99 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~ 99 (397)
..|+|||+| +|.+|..++..+.+ .|++|++++..+........ -.++..|..|.+.+.+.++ ++|.|+
T Consensus 11 ~~~~ilIiG-~g~~~~~~~~a~~~-----~G~~v~~~~~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~~~~id~vi 80 (395)
T PRK09288 11 SATRVMLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVA-HRSHVIDMLDGDALRAVIEREKPDYIV 80 (395)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchHHhh-hheEECCCCCHHHHHHHHHHhCCCEEE
Confidence 346899999 58999999999888 79999999987643211000 1256788889988888777 555444
No 373
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.17 E-value=0.21 Score=47.13 Aligned_cols=36 Identities=33% Similarity=0.339 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 65 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 65 (397)
.+..+|+|.| .|.+|+.++..|.. .|. +|++++++.
T Consensus 22 L~~~~VlVvG-~GglGs~va~~La~-----aGvg~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIG-AGALGTANAEMLVR-----AGVGKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCc
Confidence 3457899999 59999999999998 677 699999864
No 374
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=94.16 E-value=0.056 Score=50.55 Aligned_cols=72 Identities=22% Similarity=0.261 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHH-HHHHHHccCCCeeEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPE-ETQAKLSQLTDVTHI 101 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~-~l~~~~~~~~~V~h~ 101 (397)
|+++||+.| +||+...+++.|.++ ...+|++.+|..... .-...+++.+..|+.+.+ .++...+..|.|+.+
T Consensus 1 ~~~~vlllg-sg~v~~p~~d~ls~~----~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSL 75 (445)
T KOG0172|consen 1 TKKGVLLLG-SGFVSRPVADFLSRK----KDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISL 75 (445)
T ss_pred CCcceEEec-CccccchHHHHHhhc----CCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeee
Confidence 457899999 799999999999985 455788888754322 223345889999999998 888888888866555
No 375
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=94.10 E-value=0.13 Score=48.72 Aligned_cols=23 Identities=39% Similarity=0.553 Sum_probs=21.3
Q ss_pred CCEEEEEcCCChhHHHHHHHccC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPL 48 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~ 48 (397)
+.+|.|.||||++|..|++.|.+
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~ 29 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTD 29 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHh
Confidence 46899999999999999999987
No 376
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=94.07 E-value=0.061 Score=46.37 Aligned_cols=35 Identities=29% Similarity=0.304 Sum_probs=28.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP 67 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~ 67 (397)
++|.|.| +|.||+.|+++|.+ .||+|+.-+|+.++
T Consensus 2 ~~~~i~G-tGniG~alA~~~a~-----ag~eV~igs~r~~~ 36 (211)
T COG2085 2 MIIAIIG-TGNIGSALALRLAK-----AGHEVIIGSSRGPK 36 (211)
T ss_pred cEEEEec-cChHHHHHHHHHHh-----CCCeEEEecCCChh
Confidence 4566655 99999999999999 89999888776543
No 377
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=93.97 E-value=0.058 Score=50.78 Aligned_cols=22 Identities=41% Similarity=0.564 Sum_probs=20.9
Q ss_pred CEEEEEcCCChhHHHHHHHccC
Q 015961 27 SVALIVGVTGIVGNSLAEILPL 48 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~ 48 (397)
.+|.|+||||++|..|++.|.+
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~ 26 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEE 26 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhh
Confidence 6899999999999999999996
No 378
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=93.82 E-value=0.18 Score=48.38 Aligned_cols=65 Identities=20% Similarity=0.128 Sum_probs=50.0
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
++|+|.|+ |.+|.-++..+.+ .|++|++++..+....... --..+.+|..|.+.+.+..+.+|.|
T Consensus 3 ~~igilG~-Gql~~ml~~aa~~-----lG~~v~~~d~~~~~pa~~~-ad~~~~~~~~D~~~l~~~a~~~dvi 67 (372)
T PRK06019 3 KTIGIIGG-GQLGRMLALAAAP-----LGYKVIVLDPDPDSPAAQV-ADEVIVADYDDVAALRELAEQCDVI 67 (372)
T ss_pred CEEEEECC-CHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhHh-CceEEecCCCCHHHHHHHHhcCCEE
Confidence 68999995 8999999999988 8999999998654321100 1135678999999999988888753
No 379
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=93.81 E-value=0.66 Score=40.56 Aligned_cols=105 Identities=16% Similarity=0.143 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHccCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCceEEEccCCCHHHHHHHHc--
Q 015961 24 SYQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLS-- 93 (397)
Q Consensus 24 ~~~~~ILVtGat--GfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~l~~~~~-- 93 (397)
..+|++||+|-. -.|+..+++.|.+ +|.++...-..+. +. +. ....--+++||+++.+++++.+.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~-----~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAE-----QGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHH-----cCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence 457999999964 5799999999999 8988654443321 10 10 11223468999999987766554
Q ss_pred -----cCCCeeEEEEecccCC------C-cH---HHHHHhHHHHHHHHHHHHccc
Q 015961 94 -----QLTDVTHIFYVTWTNR------S-TE---AENCKINGSMFRNVLRAVIPN 133 (397)
Q Consensus 94 -----~~~~V~h~a~~~~~~~------~-~~---~~~~~~nv~gt~~ll~a~~~~ 133 (397)
..|.++|..+.+--.. + +. ....++..-+...+.++++..
T Consensus 79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~l 133 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPL 133 (259)
T ss_pred HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHh
Confidence 4677999876532110 0 12 222344455555666666654
No 380
>PRK10537 voltage-gated potassium channel; Provisional
Probab=93.64 E-value=0.1 Score=50.32 Aligned_cols=67 Identities=10% Similarity=-0.008 Sum_probs=49.4
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHH-HccCCCee
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-LSQLTDVT 99 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~ 99 (397)
+++|+|.| .|-+|+.++++|.+ +|++|++++.+.... ....++.++.||.+|++.++++ +++++.|+
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~~-----~g~~vvVId~d~~~~-~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI 307 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLRQ-----RGQAVTVIVPLGLEH-RLPDDADLIPGDSSDSAVLKKAGAARARAIL 307 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECchhhh-hccCCCcEEEeCCCCHHHHHhcCcccCCEEE
Confidence 46899999 68999999999987 788888887653221 1235688999999999887653 34455444
No 381
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.54 E-value=0.11 Score=55.16 Aligned_cols=114 Identities=17% Similarity=0.130 Sum_probs=75.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCC---------CCCCCCce--EEEccCCCHHHHHHHHc
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------WNADHLVE--YVQCDVSDPEETQAKLS 93 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~---------~~~~~~v~--~~~~Dl~d~~~l~~~~~ 93 (397)
.|..+|+||-|-.|-.|+..|.. +|.+ ++..+|+.-+. | ...+|. +-.-|++..+.-..+++
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~-----RGar~lVLtSRsGirtGYQa~~vrrW-r~~GVqV~vsT~nitt~~ga~~Li~ 1841 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQ-----RGARKLVLTSRSGIRTGYQALMVRRW-RRRGVQVQVSTSNITTAEGARGLIE 1841 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHh-----cCceEEEEeccccchhhHHHHHHHHH-HhcCeEEEEecccchhhhhHHHHHH
Confidence 47899999999999999999998 7877 56566654322 2 123443 34456666555455554
Q ss_pred cC------CCeeEEEEecc---cCCC---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecC
Q 015961 94 QL------TDVTHIFYVTW---TNRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 145 (397)
Q Consensus 94 ~~------~~V~h~a~~~~---~~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 145 (397)
.+ -.|||+|..-. .... +.++..+.-+.||.||=...|+.++.+..|+..||
T Consensus 1842 ~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSS 1905 (2376)
T KOG1202|consen 1842 ESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSS 1905 (2376)
T ss_pred HhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEe
Confidence 43 34999875421 1111 44555677888999988888888777888875553
No 382
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.46 E-value=0.12 Score=53.08 Aligned_cols=70 Identities=13% Similarity=0.091 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHH-HccCCCeeE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH 100 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~V~h 100 (397)
..++|+|.| .|-+|+.+++.|.+ +|+++++++.++... .....+.+++.||.+|++.++++ +++++.|+-
T Consensus 399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv 470 (621)
T PRK03562 399 QQPRVIIAG-FGRFGQIVGRLLLS-----SGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN 470 (621)
T ss_pred ccCcEEEEe-cChHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEE
Confidence 357899999 69999999999998 799999999886532 11224788999999999987652 344443333
No 383
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=93.34 E-value=0.15 Score=47.43 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
|+.+|.|.||||++|..|++.|.+++ ..++..+..+
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp----~~~l~~~~s~ 36 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRS----DIELLSIPEA 36 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCC----CeEEEEEecC
Confidence 56789999999999999999999853 4467777654
No 384
>PLN02928 oxidoreductase family protein
Probab=93.34 E-value=0.17 Score=48.03 Aligned_cols=70 Identities=17% Similarity=0.112 Sum_probs=45.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCC-----CCCceEEEccCCCHHHHHHHHccCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-----DHLVEYVQCDVSDPEETQAKLSQLTD 97 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~-----~~~v~~~~~Dl~d~~~l~~~~~~~~~ 97 (397)
...+|+|.|.| .|-||+.+++.|.. -|.+|++.+|........ ...+.-+........++.++++.+|.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~a-----fG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDi 229 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRP-----FGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADI 229 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCE
Confidence 45679999999 79999999999987 899999999863221000 00111111011134467888999986
Q ss_pred e
Q 015961 98 V 98 (397)
Q Consensus 98 V 98 (397)
|
T Consensus 230 V 230 (347)
T PLN02928 230 V 230 (347)
T ss_pred E
Confidence 3
No 385
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=93.26 E-value=0.055 Score=49.83 Aligned_cols=66 Identities=15% Similarity=0.091 Sum_probs=45.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
.+++|+|+| .|.+|+.+++.|.. .|++|++.+|++.... ....+... .+.+++.+.+.++|.|+.+
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~-----~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSA-----LGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEEC
Confidence 468999999 59999999999998 7899999999754210 00011221 1234567778888876664
No 386
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=93.20 E-value=0.72 Score=42.82 Aligned_cols=96 Identities=18% Similarity=0.155 Sum_probs=61.5
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCC------CC-----CCCceEEEccCCCHHHHHHHHccCC
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW------NA-----DHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~------~~-----~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
|.|+|| |.+|+.++..|.. .|. +|+++++++.... .. .....+ ... .| . +.++++|
T Consensus 1 I~IIGa-G~vG~~ia~~la~-----~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~dAD 68 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLAL-----KELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAGSD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHh-----CCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCCCC
Confidence 568997 9999999998887 555 9999998754210 00 001111 110 12 2 3478899
Q ss_pred CeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCC
Q 015961 97 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 136 (397)
Q Consensus 97 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 136 (397)
.|+.+++.......+..+....|+.-.+.+++.+.+..+.
T Consensus 69 iVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~ 108 (300)
T cd01339 69 VVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPN 108 (300)
T ss_pred EEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 8887765432222355667778998888888888887543
No 387
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.13 E-value=0.17 Score=47.21 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=30.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
+++|.|.| +|.+|+.++..|.+ .||+|+..+|+.
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~~-----~G~~V~~~~r~~ 37 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLASA-----NGHRVRVWSRRS 37 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHH-----CCCEEEEEeCCC
Confidence 36899998 79999999999998 899999999864
No 388
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=93.08 E-value=0.45 Score=42.50 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=29.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK 66 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~ 66 (397)
+.+|.|.||+|-.|+.+++.+.+. .+++ +-+++|.+.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~----~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA----PDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC----CCceEEEEEecCCc
Confidence 468999999999999999999985 4566 556666643
No 389
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=93.06 E-value=0.35 Score=38.98 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=27.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 64 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~ 64 (397)
.++|+|.| .|-+|+.+++.|.. .|. +++.++.+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~-----~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLAR-----SGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHH-----HTTSEEEEEESS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHH-----hCCCceeecCCc
Confidence 36899999 69999999999998 576 58888875
No 390
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=92.95 E-value=0.27 Score=47.25 Aligned_cols=65 Identities=15% Similarity=0.103 Sum_probs=48.3
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc--cCCCee
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT 99 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~V~ 99 (397)
||+|.| +|.+|..+++.+.+ .|++|++++..+........ -+.+.+|..|.+.+.+..+ ++|.|+
T Consensus 1 kililG-~g~~~~~l~~aa~~-----~G~~v~~~d~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~~~~id~v~ 67 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVA-HRSYVINMLDGDALRAVIEREKPDYIV 67 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhhhC-ceEEEcCCCCHHHHHHHHHHhCCCEEE
Confidence 589999 69999999999988 89999999987643211111 1356678889988888777 466544
No 391
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=92.93 E-value=0.28 Score=45.77 Aligned_cols=62 Identities=19% Similarity=0.074 Sum_probs=45.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
...+|+|.|.| .|-||+.+++.|.. -|.+|++.+|..... ...+. ..+++++++.+|. ++|+
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~~-----fgm~V~~~d~~~~~~---~~~~~--------~~~l~ell~~sDvv~lh~ 204 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQA-----FGAKVVYYSTSGKNK---NEEYE--------RVSLEELLKTSDIISIHA 204 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhh-----cCCEEEEECCCcccc---ccCce--------eecHHHHhhcCCEEEEeC
Confidence 45679999999 89999999999987 799999999853221 11121 2247788888886 5554
No 392
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=92.92 E-value=0.073 Score=49.30 Aligned_cols=66 Identities=18% Similarity=0.096 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
.+++|+|+| .|-+|..++..|.. .|.+|++++|++... .....+.+++ +.+++.+.+.++|.|+++
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~-----~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKA-----LGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 468999999 59999999999998 788999999985431 0001122222 234567778888877775
No 393
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.83 E-value=0.21 Score=45.94 Aligned_cols=54 Identities=24% Similarity=0.252 Sum_probs=43.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
..+|+|.|.|.+|.+|+.++..|++ +|+.|++..|... ++.+..+.+|.|+-+.
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~-----~gatVtv~~~~t~--------------------~l~e~~~~ADIVIsav 210 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQ-----AHCSVTVVHSRST--------------------DAKALCRQADIVVAAV 210 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEECCCCC--------------------CHHHHHhcCCEEEEec
Confidence 3579999999999999999999998 8999999977532 2456677788666653
No 394
>PRK06849 hypothetical protein; Provisional
Probab=92.81 E-value=0.15 Score=49.33 Aligned_cols=36 Identities=17% Similarity=0.102 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
++++|||||+...+|..+++.|.+ .|++|++++..+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~-----~G~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHN-----AGHTVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCc
Confidence 458999999999999999999999 899999998864
No 395
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=92.67 E-value=0.9 Score=42.93 Aligned_cols=35 Identities=31% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 65 (397)
+.++|+|.| .|-+|+++++.|.+ .|+ ++++++++.
T Consensus 23 ~~~~VlIiG-~GglGs~va~~La~-----aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVG-AGALGAANAEALVR-----AGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCCc
Confidence 457899999 57899999999998 687 688888864
No 396
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=92.66 E-value=0.18 Score=36.46 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=29.3
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
+|+|.| .|++|-.++..|.+ .|.+|+.+.|++.
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~-----~g~~vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAE-----LGKEVTLIERSDR 33 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHH-----TTSEEEEEESSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHH-----hCcEEEEEeccch
Confidence 588999 69999999999998 7899999999753
No 397
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=92.58 E-value=0.63 Score=41.84 Aligned_cols=89 Identities=19% Similarity=0.091 Sum_probs=58.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe-CCCCCCC--CCCCCceEEEccCCCHHHHHHHHcc--CCCeeEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHI 101 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~-R~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~--~~~V~h~ 101 (397)
|+|||.|||+ =|+.|++.|.+ .|+ |+.-+ -+..... ...+.+.++.+-+.+.+.+.+.++. ++.|+..
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~-----~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA 73 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAE-----AGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA 73 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHh-----cCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 5899999987 58999999998 777 44322 2211111 1224678888998899999998864 4445555
Q ss_pred EEecccCCCcHHHHHHhHHHHHHHHHHHHcccCC
Q 015961 102 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP 135 (397)
Q Consensus 102 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~ 135 (397)
+++.. ..-++|+.++|++.+.
T Consensus 74 ---THPfA----------~~is~na~~a~~~~~i 94 (249)
T PF02571_consen 74 ---THPFA----------AEISQNAIEACRELGI 94 (249)
T ss_pred ---CCchH----------HHHHHHHHHHHhhcCc
Confidence 22211 1345678999998763
No 398
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=92.54 E-value=0.41 Score=48.66 Aligned_cols=70 Identities=13% Similarity=0.029 Sum_probs=51.6
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
+..+.|+|+|.| .|.+|.-++..+.+ .|++|++++.++........ -..+.+|..|.+.+.+..+.+|.|
T Consensus 18 ~~~~~k~IgIIG-gGqlg~mla~aA~~-----lG~~Vi~ld~~~~apa~~~A-D~~~v~~~~D~~~l~~~a~~~dvI 87 (577)
T PLN02948 18 HGVSETVVGVLG-GGQLGRMLCQAASQ-----MGIKVKVLDPLEDCPASSVA-ARHVVGSFDDRAAVREFAKRCDVL 87 (577)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhhhC-ceeeeCCCCCHHHHHHHHHHCCEE
Confidence 345668999999 58999999999998 79999999886542211001 124568899999888888877643
No 399
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=92.54 E-value=0.29 Score=46.45 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=25.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcE---EEEEeCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVARR 64 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~---V~~l~R~ 64 (397)
.+|.|.||||++|..|++.|++. ..+. ++.++..
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~----~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEE----NDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhC----CCCCcCcEEEecch
Confidence 58999999999999999966654 3444 6666653
No 400
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.47 E-value=0.27 Score=45.01 Aligned_cols=54 Identities=17% Similarity=0.199 Sum_probs=43.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
..+++|+|+|+++.+|+.++..|.+ .|..|+.+.++. .++.+.+..+|.|+...
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~-----~gatVtv~~s~t--------------------~~l~~~~~~ADIVIsAv 209 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQ-----KNASVTILHSRS--------------------KDMASYLKDADVIVSAV 209 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHHhhCCEEEECC
Confidence 4568999999999999999999998 788999887642 23567788888766653
No 401
>PRK13243 glyoxylate reductase; Reviewed
Probab=92.42 E-value=0.12 Score=48.65 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=44.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
...+|+|.|.| .|.||+.+++.|.. .|++|++.+|..........++ . ..++.++++.+|. ++|+
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~~-----~G~~V~~~d~~~~~~~~~~~~~-----~---~~~l~ell~~aDiV~l~l 212 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAKG-----FGMRILYYSRTRKPEAEKELGA-----E---YRPLEELLRESDFVSLHV 212 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCChhhHHHcCC-----E---ecCHHHHHhhCCEEEEeC
Confidence 34679999999 69999999999998 7999999998643211000011 1 1246677888886 3443
No 402
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=92.41 E-value=0.59 Score=46.94 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=67.9
Q ss_pred ccccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCC-CCC-----------CCCCCceEEE
Q 015961 13 RKKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK-PNW-----------NADHLVEYVQ 79 (397)
Q Consensus 13 ~~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~-~~~-----------~~~~~v~~~~ 79 (397)
-.||+.- ...+|+|.| .|-+|++++..|+. .|.. |++++-+.. .+. .-++++.+..
T Consensus 121 ~~rF~~q-----R~akVlVlG-~Gg~~s~lv~sL~~-----sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~ 189 (637)
T TIGR03693 121 ALKFELS-----RNAKILAAG-SGDFLTKLVRSLID-----SGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQE 189 (637)
T ss_pred hhhhhhh-----hcccEEEEe-cCchHHHHHHHHHh-----cCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEe
Confidence 3556533 345899999 78899999999998 5654 777754322 110 0145777777
Q ss_pred ccCCCHHHHHHHHccCCCeeEEEEecccCCCcHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 015961 80 CDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 141 (397)
Q Consensus 80 ~Dl~d~~~l~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 141 (397)
.|..+.+++.+.+++.|.|++++- . .+....+.+.++|.+.++...-++
T Consensus 190 i~~~~~~dl~ev~~~~DiVi~vsD-----d--------y~~~~Lr~lN~acvkegk~~IPai 238 (637)
T TIGR03693 190 IDFAEDQHLHEAFEPADWVLYVSD-----N--------GDIDDLHALHAFCKEEGKGFIPAI 238 (637)
T ss_pred ccCCcchhHHHhhcCCcEEEEECC-----C--------CChHHHHHHHHHHHHcCCCeEEEE
Confidence 777888899999999998888732 1 122234456677776654444443
No 403
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=92.36 E-value=0.76 Score=39.82 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=29.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP 65 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~ 65 (397)
..+..+|+|.|+.| +|+.+++.|.. .|.. ++.++.+.
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~-----~GVg~i~lvD~d~ 53 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVL-----AGIDSITIVDHRL 53 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence 34457899999766 99999999998 5765 88888764
No 404
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.25 E-value=0.34 Score=44.48 Aligned_cols=55 Identities=18% Similarity=0.154 Sum_probs=42.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
...+|+|+|.|++|.+|+.++..|++ .|..|+++.|+. .++.+.++++|.|++..
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~-----~gatVtv~~~~t--------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLN-----ANATVTICHSRT--------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHh-----CCCEEEEEeCCc--------------------hhHHHHhccCCEEEEcc
Confidence 34568999999999999999999998 778888887631 22455667888777763
No 405
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=92.15 E-value=0.27 Score=45.46 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=26.5
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 63 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R 63 (397)
+|.|.||||+.|..|++.|..+| ..++..+.-
T Consensus 3 ~v~IvGasGy~G~el~rlL~~HP----~~el~~l~s 34 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGRD----DIELLSIAP 34 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCCC----CeEEEEEec
Confidence 69999999999999999999863 446666653
No 406
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=92.14 E-value=0.19 Score=47.58 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=26.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 63 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R 63 (397)
.+|.|+||||++|++|++.|.++ ...+|..+.+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~----~~~~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH----PYFELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC----CCceEEEEEE
Confidence 37999999999999999999874 3458777743
No 407
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=92.14 E-value=0.21 Score=43.32 Aligned_cols=37 Identities=24% Similarity=0.138 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
...+|+|+|+|. |.+|+++++.|.+ .|++|++.++++
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~-----~G~~Vvv~D~~~ 61 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLE-----EGAKLIVADINE 61 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence 345689999995 8999999999998 899999888764
No 408
>PRK06436 glycerate dehydrogenase; Provisional
Probab=92.07 E-value=0.39 Score=44.55 Aligned_cols=59 Identities=17% Similarity=0.135 Sum_probs=42.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
...+|+|.|.| .|.||+.+++.|.. -|++|++.+|.... .++... ..+++++++.+|.|
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~a-----fG~~V~~~~r~~~~-----~~~~~~------~~~l~ell~~aDiv 177 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAKA-----FGMNIYAYTRSYVN-----DGISSI------YMEPEDIMKKSDFV 177 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCcc-----cCcccc------cCCHHHHHhhCCEE
Confidence 45679999999 89999999998876 79999999986432 122110 12466778888863
No 409
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=91.94 E-value=0.28 Score=41.71 Aligned_cols=39 Identities=28% Similarity=0.346 Sum_probs=32.9
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
....+++|.|.| .|-||+.+++.|.. -|.+|++.+|...
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~ 70 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKA-----FGMRVIGYDRSPK 70 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHH-----TT-EEEEEESSCH
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeec-----CCceeEEecccCC
Confidence 344678999999 79999999999998 8999999999764
No 410
>PRK07877 hypothetical protein; Provisional
Probab=91.93 E-value=0.31 Score=50.55 Aligned_cols=45 Identities=20% Similarity=0.206 Sum_probs=34.4
Q ss_pred cccCccCccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc--EEEEEeCCC
Q 015961 14 KKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRP 65 (397)
Q Consensus 14 ~~~~~~~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~--~V~~l~R~~ 65 (397)
.+|..++-......+|+|.|+ | +|++++..|.. .|. ++++++.+.
T Consensus 95 ~~ig~~~Q~~L~~~~V~IvG~-G-lGs~~a~~Lar-----aGvvG~l~lvD~D~ 141 (722)
T PRK07877 95 NKITAEEQERLGRLRIGVVGL-S-VGHAIAHTLAA-----EGLCGELRLADFDT 141 (722)
T ss_pred hhCCHHHHHHHhcCCEEEEEe-c-HHHHHHHHHHH-----ccCCCeEEEEcCCE
Confidence 445555555556789999998 8 99999999998 563 688888753
No 411
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=91.86 E-value=0.35 Score=45.28 Aligned_cols=65 Identities=23% Similarity=0.211 Sum_probs=45.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
+..+|++.|.| .|-||+.+++.|.. -|.+|...+|++........+..+ .+ +.++++.+|. ++||
T Consensus 143 ~l~gktvGIiG-~GrIG~avA~r~~~-----Fgm~v~y~~~~~~~~~~~~~~~~y--~~------l~ell~~sDii~l~~ 208 (324)
T COG1052 143 DLRGKTLGIIG-LGRIGQAVARRLKG-----FGMKVLYYDRSPNPEAEKELGARY--VD------LDELLAESDIISLHC 208 (324)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCCChHHHhhcCcee--cc------HHHHHHhCCEEEEeC
Confidence 34579999999 99999999999996 899999999986421100011222 22 5677888886 4554
No 412
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=91.73 E-value=0.22 Score=39.64 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=26.9
Q ss_pred EEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961 29 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 63 (397)
Q Consensus 29 ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R 63 (397)
|.|.|+||.||+..++-+.+.+ ..++|++++=
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~---d~f~v~~Lsa 32 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHP---DKFEVVALSA 32 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCT---TTEEEEEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCC---CceEEEEEEc
Confidence 6899999999999998888743 4688988884
No 413
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=91.71 E-value=0.17 Score=47.15 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
++|.|+| +|++|+.++..|++ .|++|++++|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFAR-----AGHEVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHH-----CCCeeEEEeCCH
Confidence 4799999 89999999999998 899999999975
No 414
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=91.69 E-value=0.2 Score=47.50 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
|.++|.|.| +|.+|+.++..|.+ .|++|++++|++
T Consensus 1 ~~mkI~IiG-~G~mG~~~A~~L~~-----~G~~V~~~~r~~ 35 (341)
T PRK08229 1 MMARICVLG-AGSIGCYLGGRLAA-----AGADVTLIGRAR 35 (341)
T ss_pred CCceEEEEC-CCHHHHHHHHHHHh-----cCCcEEEEecHH
Confidence 456899999 79999999999998 799999999964
No 415
>PRK08655 prephenate dehydrogenase; Provisional
Probab=91.67 E-value=0.2 Score=49.16 Aligned_cols=35 Identities=31% Similarity=0.368 Sum_probs=31.6
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
++|.|+||+|.+|+.+++.|.+ .|++|++++|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~-----~G~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKE-----KGFEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHH-----CCCEEEEEECChH
Confidence 3799999999999999999998 7999999999754
No 416
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=91.62 E-value=0.31 Score=45.64 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=44.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
..++|++-|.| .|-||+++++.|.. -|.+|++.++........ .... .-.+++++.++.+|. ++|+
T Consensus 139 el~gkTvGIiG-~G~IG~~va~~l~a-----fgm~v~~~d~~~~~~~~~--~~~~-----~~~~~Ld~lL~~sDiv~lh~ 205 (324)
T COG0111 139 ELAGKTVGIIG-LGRIGRAVAKRLKA-----FGMKVIGYDPYSPRERAG--VDGV-----VGVDSLDELLAEADILTLHL 205 (324)
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEECCCCchhhhc--cccc-----eecccHHHHHhhCCEEEEcC
Confidence 34689999999 89999999999998 899999999943322110 0001 112346677787876 4444
No 417
>PRK07574 formate dehydrogenase; Provisional
Probab=91.52 E-value=0.21 Score=47.96 Aligned_cols=62 Identities=18% Similarity=0.022 Sum_probs=43.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
..+++|.|.| .|-||+.+++.|.. -|++|++.+|...... ....+++ -..+++++++.+|.|
T Consensus 190 L~gktVGIvG-~G~IG~~vA~~l~~-----fG~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvV 252 (385)
T PRK07574 190 LEGMTVGIVG-AGRIGLAVLRRLKP-----FDVKLHYTDRHRLPEEVEQELGLT-------YHVSFDSLVSVCDVV 252 (385)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCCchhhHhhcCce-------ecCCHHHHhhcCCEE
Confidence 4578999999 79999999999998 7999999998652211 0001111 122467788889863
No 418
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=91.39 E-value=0.3 Score=46.70 Aligned_cols=61 Identities=18% Similarity=0.025 Sum_probs=43.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
..+++|.|.| .|.||+.+++.|.. -|++|++.++..... .. .. ...+++++++.+|. ++|+
T Consensus 114 L~gktvGIIG-~G~IG~~vA~~l~a-----~G~~V~~~dp~~~~~-----~~---~~---~~~~L~ell~~sDiI~lh~ 175 (378)
T PRK15438 114 LHDRTVGIVG-VGNVGRRLQARLEA-----LGIKTLLCDPPRADR-----GD---EG---DFRSLDELVQEADILTFHT 175 (378)
T ss_pred cCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCccccc-----cc---cc---ccCCHHHHHhhCCEEEEeC
Confidence 4578999999 79999999999988 799999998632111 00 01 12346777888886 4454
No 419
>PRK06487 glycerate dehydrogenase; Provisional
Probab=91.30 E-value=0.36 Score=45.17 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=44.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
...+|+|.|.| .|-||+.+++.|.. -|.+|++.+|..... ... ..++.++++.+|. ++|+
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~~-----fgm~V~~~~~~~~~~-----~~~--------~~~l~ell~~sDiv~l~l 205 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAEA-----FGMRVLIGQLPGRPA-----RPD--------RLPLDELLPQVDALTLHC 205 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCCcc-----ccc--------ccCHHHHHHhCCEEEECC
Confidence 35678999999 79999999999987 799999998753211 111 1247788888886 4444
No 420
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=91.29 E-value=0.35 Score=47.14 Aligned_cols=33 Identities=30% Similarity=0.350 Sum_probs=30.0
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
+|.|.| .|++|..++..|.+ .||+|+++++++.
T Consensus 2 kI~vIG-lG~~G~~lA~~La~-----~G~~V~~~d~~~~ 34 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLAD-----LGHEVTGVDIDQE 34 (411)
T ss_pred EEEEEC-CCchhHHHHHHHHh-----cCCeEEEEECCHH
Confidence 699998 79999999999998 8999999998754
No 421
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=91.25 E-value=0.69 Score=40.21 Aligned_cols=38 Identities=26% Similarity=0.233 Sum_probs=31.2
Q ss_pred cCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961 22 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 65 (397)
Q Consensus 22 ~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 65 (397)
.....++|+|.| .|-+|+.+++.|.. .|. ++++++++.
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~-----~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAG-----AGVGTIVIVDDDH 55 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEecCCE
Confidence 344557899999 79999999999998 676 699888763
No 422
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=91.08 E-value=0.5 Score=44.95 Aligned_cols=63 Identities=17% Similarity=0.007 Sum_probs=47.7
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD 97 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 97 (397)
+|+|.|+ |.+|..++..+.+ .|++|++++.++........ -+.+.+|..|.+.+.+..+.+|.
T Consensus 1 ~igiiG~-gql~~~l~~aa~~-----lG~~v~~~d~~~~~p~~~~a-d~~~~~~~~d~~~i~~~a~~~dv 63 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARP-----LGIKVHVLDPDANSPAVQVA-DHVVLAPFFDPAAIRELAESCDV 63 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHH-----cCCEEEEECCCCCCChhHhC-ceeEeCCCCCHHHHHHHHhhCCE
Confidence 4889995 8999999999998 89999999886543211001 12457889999999888888874
No 423
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=90.99 E-value=0.27 Score=46.28 Aligned_cols=59 Identities=14% Similarity=0.191 Sum_probs=42.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCe
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V 98 (397)
..+++|.|.| .|.||+.+++.|.. .|++|++.+|.+.... ..++ . ..++.++++.+|.|
T Consensus 144 l~g~~VgIIG-~G~IG~~vA~~L~~-----~G~~V~~~d~~~~~~~---~~~~-----~--~~~l~ell~~aDiV 202 (330)
T PRK12480 144 VKNMTVAIIG-TGRIGAATAKIYAG-----FGATITAYDAYPNKDL---DFLT-----Y--KDSVKEAIKDADII 202 (330)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEeCChhHhh---hhhh-----c--cCCHHHHHhcCCEE
Confidence 4567999999 79999999999988 7999999998753311 1111 1 12466788888863
No 424
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=90.91 E-value=0.22 Score=42.60 Aligned_cols=33 Identities=30% Similarity=0.345 Sum_probs=26.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
|+|-|.| .||+|..++-.|.+ .||+|++++.++
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~-----~G~~V~g~D~~~ 33 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAE-----KGHQVIGVDIDE 33 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHH-----TTSEEEEE-S-H
T ss_pred CEEEEEC-CCcchHHHHHHHHh-----CCCEEEEEeCCh
Confidence 5899998 89999999999999 899999999864
No 425
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.82 E-value=0.48 Score=43.65 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA 62 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~ 62 (397)
+..+|+|+|.|.+|.+|..++..|++ .|+.|++..
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~-----~g~tVtv~~ 189 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLA-----ANATVTIAH 189 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHh-----CCCEEEEEC
Confidence 34579999999999999999999998 899999885
No 426
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=90.74 E-value=0.76 Score=42.07 Aligned_cols=35 Identities=31% Similarity=0.317 Sum_probs=28.8
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
.++|+|.| .|.+|+.+++.|.+ .|+.|.++.++..
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~-----~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKE-----AGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHH-----cCCeEEEEeecCc
Confidence 45778877 99999999999999 8998877776543
No 427
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=90.61 E-value=0.4 Score=45.93 Aligned_cols=62 Identities=21% Similarity=0.124 Sum_probs=43.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
...+++|.|.| .|.||+.+++.|.. -|++|++.++...... ... . ..+++++++.+|. ++|+
T Consensus 113 ~l~gktvGIIG-~G~IG~~va~~l~a-----~G~~V~~~Dp~~~~~~---~~~-----~---~~~l~ell~~aDiV~lh~ 175 (381)
T PRK00257 113 DLAERTYGVVG-AGHVGGRLVRVLRG-----LGWKVLVCDPPRQEAE---GDG-----D---FVSLERILEECDVISLHT 175 (381)
T ss_pred CcCcCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCcccccc---cCc-----c---ccCHHHHHhhCCEEEEeC
Confidence 34568999999 79999999999998 7999999986422110 111 1 1246677888886 5555
No 428
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=90.54 E-value=0.72 Score=40.94 Aligned_cols=36 Identities=28% Similarity=0.284 Sum_probs=29.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 64 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~ 64 (397)
..+..+|+|.| .|-+|+++++.|.. .|. ++++++.+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~-----~Gvg~i~lvD~D 54 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAA-----AGVGKLGLVDDD 54 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence 34567999999 79999999999998 566 57777765
No 429
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=90.50 E-value=0.74 Score=42.77 Aligned_cols=67 Identities=16% Similarity=0.190 Sum_probs=44.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CC-CCCCceEEE-----ccCCCHHHHHHHHccCCCe
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQ-----CDVSDPEETQAKLSQLTDV 98 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~-----~Dl~d~~~l~~~~~~~~~V 98 (397)
++|.|.| +|--|++|+..|.+ +||+|+...|++... .. ...+.+++. .++.-..++.++++++|.|
T Consensus 2 ~kI~ViG-aGswGTALA~~la~-----ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~i 75 (329)
T COG0240 2 MKIAVIG-AGSWGTALAKVLAR-----NGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADII 75 (329)
T ss_pred ceEEEEc-CChHHHHHHHHHHh-----cCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEE
Confidence 5899999 69999999999999 789999999975321 00 011222222 2233334677888888854
Q ss_pred e
Q 015961 99 T 99 (397)
Q Consensus 99 ~ 99 (397)
+
T Consensus 76 v 76 (329)
T COG0240 76 V 76 (329)
T ss_pred E
Confidence 3
No 430
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=90.46 E-value=0.15 Score=44.36 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=31.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP 67 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~ 67 (397)
.++.++|++||+|..++.++.. .||+|.-+.|+...
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~~-----sgy~vvsvsrsgas 38 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAVT-----SGYQVVSVSRSGAS 38 (283)
T ss_pred ccceeecccccchhhhhHHHHh-----cCceEEEeccccCC
Confidence 4678999999999999999998 79999999997644
No 431
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=90.24 E-value=0.37 Score=38.94 Aligned_cols=68 Identities=18% Similarity=0.147 Sum_probs=45.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCC-----CCCCCCceEEEccCCCHHHHHHHHccCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLT 96 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 96 (397)
...+++++|.|| |-.|+.++..|.+ .|.+ |++++|...+. ......++++ ++. ++.+.+..+|
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~-----~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~~---~~~~~~~~~D 77 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAA-----LGAKEITIVNRTPERAEALAEEFGGVNIEAI--PLE---DLEEALQEAD 77 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHH-----TTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EGG---GHCHHHHTES
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHH-----cCCCEEEEEECCHHHHHHHHHHcCcccccee--eHH---HHHHHHhhCC
Confidence 345689999995 9999999999998 6766 99999975432 0011123333 332 3446677888
Q ss_pred CeeEE
Q 015961 97 DVTHI 101 (397)
Q Consensus 97 ~V~h~ 101 (397)
.|+++
T Consensus 78 ivI~a 82 (135)
T PF01488_consen 78 IVINA 82 (135)
T ss_dssp EEEE-
T ss_pred eEEEe
Confidence 77776
No 432
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=90.24 E-value=1.2 Score=38.45 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP 65 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~ 65 (397)
.+..+|+|.|+.| +|+++++.|.. .|.. ++.++.+.
T Consensus 19 L~~s~VlIiG~gg-lG~evak~La~-----~GVg~i~lvD~d~ 55 (197)
T cd01492 19 LRSARILLIGLKG-LGAEIAKNLVL-----SGIGSLTILDDRT 55 (197)
T ss_pred HHhCcEEEEcCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence 3457899999655 99999999998 6765 88888763
No 433
>PRK06932 glycerate dehydrogenase; Provisional
Probab=90.20 E-value=0.51 Score=44.10 Aligned_cols=61 Identities=15% Similarity=0.049 Sum_probs=43.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
...+|+|.|.| .|-||+.+++.|.. -|.+|++.+|...... . . ...+++++++.+|. ++|+
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~-----fg~~V~~~~~~~~~~~----~-----~---~~~~l~ell~~sDiv~l~~ 205 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQA-----LGMKVLYAEHKGASVC----R-----E---GYTPFEEVLKQADIVTLHC 205 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCccccc----c-----c---ccCCHHHHHHhCCEEEEcC
Confidence 35679999999 79999999999987 7999999887432110 0 0 12347788888886 4454
No 434
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=90.17 E-value=0.49 Score=39.33 Aligned_cols=33 Identities=24% Similarity=0.109 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 63 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R 63 (397)
.+++|+|.| .|-+|...++.|++ .|++|+.++.
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~-----~ga~V~VIsp 44 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKD-----TGAFVTVVSP 44 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEcC
Confidence 468999999 59999999999998 7999998864
No 435
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=90.16 E-value=0.39 Score=46.67 Aligned_cols=63 Identities=19% Similarity=0.106 Sum_probs=44.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
...+|+|.|.| .|-||+.+++.|.. -|.+|++.+|.+.... ..+. ...+++++++.+|. ++|+
T Consensus 148 ~L~gktvGIiG-~G~IG~~vA~~~~~-----fGm~V~~~d~~~~~~~---~~~~-------~~~~l~ell~~sDiVslh~ 211 (409)
T PRK11790 148 EVRGKTLGIVG-YGHIGTQLSVLAES-----LGMRVYFYDIEDKLPL---GNAR-------QVGSLEELLAQSDVVSLHV 211 (409)
T ss_pred cCCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCccccc---CCce-------ecCCHHHHHhhCCEEEEcC
Confidence 34679999999 89999999999987 7999999998532211 1111 11246778888886 4454
No 436
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=89.96 E-value=0.62 Score=43.84 Aligned_cols=38 Identities=26% Similarity=0.328 Sum_probs=28.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
++.+|.|.||||++|..|++.|.+... ...++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~h--P~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQF--PVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCC--CceEEEEEEcc
Confidence 346899999999999999999987311 13366666543
No 437
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=89.87 E-value=0.44 Score=44.58 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=30.6
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
.++|+|.| +|-||+.++..|.+ .|++|+++.|+.
T Consensus 5 ~m~I~IiG-~GaiG~~lA~~L~~-----~g~~V~~~~r~~ 38 (313)
T PRK06249 5 TPRIGIIG-TGAIGGFYGAMLAR-----AGFDVHFLLRSD 38 (313)
T ss_pred CcEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEEeCC
Confidence 35899998 79999999999998 799999999975
No 438
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=89.81 E-value=0.49 Score=47.63 Aligned_cols=64 Identities=23% Similarity=0.186 Sum_probs=44.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
..+|+|.|.| .|.||+.+++.|.. .|++|++.+|..........+++.. ++.++++.+|. ++|+
T Consensus 138 l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~~--------~l~ell~~aDiV~l~l 202 (526)
T PRK13581 138 LYGKTLGIIG-LGRIGSEVAKRAKA-----FGMKVIAYDPYISPERAAQLGVELV--------SLDELLARADFITLHT 202 (526)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEEE--------cHHHHHhhCCEEEEcc
Confidence 4678999999 79999999999998 8999999998532211111123221 35677888886 3443
No 439
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=89.69 E-value=0.47 Score=39.03 Aligned_cols=36 Identities=25% Similarity=0.148 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK 66 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~ 66 (397)
.+++|+|+|+ |.+|..+++.|.+ .| ++|++++|++.
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~-----~g~~~v~v~~r~~~ 54 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAE-----LGAAKIVIVNRTLE 54 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEcCCHH
Confidence 3578999996 9999999999987 54 78999998753
No 440
>PLN02306 hydroxypyruvate reductase
Probab=89.52 E-value=0.46 Score=45.68 Aligned_cols=37 Identities=11% Similarity=0.049 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcc-CCCCCCCCcEEEEEeCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~V~~l~R~~ 65 (397)
...+++|.|.| .|.||+.+++.|. . -|.+|++.+|..
T Consensus 162 ~L~gktvGIiG-~G~IG~~vA~~l~~~-----fGm~V~~~d~~~ 199 (386)
T PLN02306 162 LLKGQTVGVIG-AGRIGSAYARMMVEG-----FKMNLIYYDLYQ 199 (386)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhc-----CCCEEEEECCCC
Confidence 34678999999 8999999999986 5 688999999864
No 441
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=89.48 E-value=0.41 Score=45.87 Aligned_cols=71 Identities=13% Similarity=0.021 Sum_probs=49.8
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCC-CCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
+.+|+|+|+ |-+|...++.|.. .|.+|++++|++.... .....-..+..+..+.+.+.+.+.++|.|+.++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~-----lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANG-----LGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHH-----CCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcc
Confidence 467999985 9999999999998 7889999998753210 000000123345567788888899898877664
No 442
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=89.48 E-value=0.48 Score=44.70 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=25.9
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcE---EEEEeC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVAR 63 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~---V~~l~R 63 (397)
.+|.|.||||++|..|++.|.++ ..++ +..+..
T Consensus 6 ~~VaIvGATG~vG~ell~lL~~h----~~f~v~~l~~~aS 41 (347)
T PRK06728 6 YHVAVVGATGAVGQKIIELLEKE----TKFNIAEVTLLSS 41 (347)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHC----CCCCcccEEEEEC
Confidence 58999999999999999999854 3444 555554
No 443
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.46 E-value=0.55 Score=43.15 Aligned_cols=73 Identities=14% Similarity=0.059 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
.+++|-|+|+.| +|+--++.-.. -|++|++++++..+. ....-+.+.+..-..|++.++++....|.++|.+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKA-----MG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v 254 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKA-----MGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV 254 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHH-----hCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence 468999999999 99887777766 899999999986321 1111244444444447777777777777788875
Q ss_pred E
Q 015961 103 Y 103 (397)
Q Consensus 103 ~ 103 (397)
.
T Consensus 255 ~ 255 (360)
T KOG0023|consen 255 S 255 (360)
T ss_pred e
Confidence 4
No 444
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=89.44 E-value=0.22 Score=48.63 Aligned_cols=67 Identities=19% Similarity=0.092 Sum_probs=44.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 100 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h 100 (397)
..+++|+|.|+ |-+|..+++.|.. .| .+|++++|+.... ....-+... .+.+++.+.+.++|.|+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~-----~G~~~V~v~~rs~~ra~~la~~~g~~~-----i~~~~l~~~l~~aDvVi~ 246 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLR-----KGVGKILIANRTYERAEDLAKELGGEA-----VKFEDLEEYLAEADIVIS 246 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHcCCeE-----eeHHHHHHHHhhCCEEEE
Confidence 44589999995 9999999999988 67 6799999975432 100001111 123456677788886666
Q ss_pred E
Q 015961 101 I 101 (397)
Q Consensus 101 ~ 101 (397)
+
T Consensus 247 a 247 (417)
T TIGR01035 247 S 247 (417)
T ss_pred C
Confidence 5
No 445
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=89.44 E-value=0.47 Score=44.95 Aligned_cols=75 Identities=16% Similarity=0.054 Sum_probs=43.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHc----cCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTD 97 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~----~~~~ 97 (397)
-..+++|||.||+|-+|+..++.+.. .+ ..|++..+.....+...-+. -...|..+++-.+...+ ++|.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~-----~~~~~v~t~~s~e~~~l~k~lGA-d~vvdy~~~~~~e~~kk~~~~~~Dv 228 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKH-----AGAIKVVTACSKEKLELVKKLGA-DEVVDYKDENVVELIKKYTGKGVDV 228 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHh-----cCCcEEEEEcccchHHHHHHcCC-cEeecCCCHHHHHHHHhhcCCCccE
Confidence 34567999999999999999988877 56 34444443322211110111 12466667544433333 3666
Q ss_pred eeEEEE
Q 015961 98 VTHIFY 103 (397)
Q Consensus 98 V~h~a~ 103 (397)
|+++++
T Consensus 229 VlD~vg 234 (347)
T KOG1198|consen 229 VLDCVG 234 (347)
T ss_pred EEECCC
Confidence 777654
No 446
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=89.37 E-value=0.98 Score=36.67 Aligned_cols=53 Identities=26% Similarity=0.273 Sum_probs=41.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
..+|+|+|.|.+.-+|..|+..|.+ +|..|+...++.. ++++.++.+|.|+-.
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~-----~gatV~~~~~~t~--------------------~l~~~v~~ADIVvsA 78 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQR-----DGATVYSCDWKTI--------------------QLQSKVHDADVVVVG 78 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeCCCCc--------------------CHHHHHhhCCEEEEe
Confidence 3568999999999999999999998 7889988876431 245667888865554
No 447
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=89.29 E-value=1.3 Score=38.00 Aligned_cols=76 Identities=24% Similarity=0.211 Sum_probs=47.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCC-HHHHHHHHccCCCeeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD-PEETQAKLSQLTDVTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~~V~h~ 101 (397)
+..+|+|+|.|.+..+|.-|+..|++ +|..|+..+.+...................| ...+.+.++.+|.|+-.
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~-----~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsA 133 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLAN-----DGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITG 133 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHH-----CCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEc
Confidence 34579999999999999999999998 7889998864321110000000001111112 22366778888876665
Q ss_pred EE
Q 015961 102 FY 103 (397)
Q Consensus 102 a~ 103 (397)
++
T Consensus 134 vG 135 (197)
T cd01079 134 VP 135 (197)
T ss_pred cC
Confidence 43
No 448
>PRK06444 prephenate dehydrogenase; Provisional
Probab=89.27 E-value=0.42 Score=41.28 Aligned_cols=28 Identities=32% Similarity=0.520 Sum_probs=25.8
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEE
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVY 59 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~ 59 (397)
++|.|.||+|-+|+.+++.|.+ .|+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~-----~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDD-----NGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHh-----CCCEEE
Confidence 3799999999999999999998 799986
No 449
>PLN03139 formate dehydrogenase; Provisional
Probab=89.26 E-value=0.41 Score=45.96 Aligned_cols=64 Identities=17% Similarity=0.049 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC-CCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
...+|+|.|.| .|-||+.+++.|.. -|.+|++.+|..... .....++. -.+++.++++.+|.|+
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~a-----fG~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~sDvV~ 260 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKP-----FNCNLLYHDRLKMDPELEKETGAK-------FEEDLDAMLPKCDVVV 260 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHH-----CCCEEEEECCCCcchhhHhhcCce-------ecCCHHHHHhhCCEEE
Confidence 45678999999 79999999999987 799999998864221 10001111 1124667788888633
No 450
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=89.22 E-value=0.71 Score=43.33 Aligned_cols=65 Identities=18% Similarity=0.092 Sum_probs=44.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcc-CCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTH 100 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~-~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h 100 (397)
...+|++.|.| .|-||+.+++.|. . -|.+|++.+|..........++++ .++.++++.+|. ++|
T Consensus 142 ~L~gktvGIiG-~G~IG~~va~~l~~~-----fgm~V~~~~~~~~~~~~~~~~~~~--------~~l~ell~~sDvv~lh 207 (323)
T PRK15409 142 DVHHKTLGIVG-MGRIGMALAQRAHFG-----FNMPILYNARRHHKEAEERFNARY--------CDLDTLLQESDFVCII 207 (323)
T ss_pred CCCCCEEEEEc-ccHHHHHHHHHHHhc-----CCCEEEEECCCCchhhHHhcCcEe--------cCHHHHHHhCCEEEEe
Confidence 35679999999 7999999999997 6 688999888764221100112221 236678888986 445
Q ss_pred E
Q 015961 101 I 101 (397)
Q Consensus 101 ~ 101 (397)
+
T Consensus 208 ~ 208 (323)
T PRK15409 208 L 208 (323)
T ss_pred C
Confidence 4
No 451
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=89.16 E-value=0.23 Score=48.60 Aligned_cols=69 Identities=16% Similarity=0.095 Sum_probs=45.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
..+++|+|.| +|-+|..+++.|.. .|. +|++++|++.........+ .++..+.+++.+.+.++|.|+.+
T Consensus 180 ~~~~~vlViG-aG~iG~~~a~~L~~-----~G~~~V~v~~r~~~ra~~la~~~---g~~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIG-AGEMGELVAKHLAE-----KGVRKITVANRTLERAEELAEEF---GGEAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHH-----CCCCeEEEEeCCHHHHHHHHHHc---CCcEeeHHHHHHHhccCCEEEEC
Confidence 4558999999 59999999999987 676 6999999754321000000 11223335566777888866665
No 452
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=89.13 E-value=1.1 Score=40.87 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=50.6
Q ss_pred ccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC
Q 015961 21 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD 97 (397)
Q Consensus 21 ~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 97 (397)
+..+...||++.| +|-+|+.++-++.+ -|.+|++++|-....--. -.-.-...|.+|.+.+...++...+
T Consensus 7 ~~~~~a~kvmLLG-SGELGKEvaIe~QR-----LG~eViAVDrY~~APAmq-VAhrs~Vi~MlD~~al~avv~rekP 76 (394)
T COG0027 7 PLRPQATKVMLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQ-VAHRSYVIDMLDGDALRAVVEREKP 76 (394)
T ss_pred CCCCCCeEEEEec-CCccchHHHHHHHh-----cCCEEEEecCcCCChhhh-hhhheeeeeccCHHHHHHHHHhhCC
Confidence 3333446799999 89999999999998 799999999965431000 0012457899999999888876544
No 453
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=89.11 E-value=0.44 Score=46.48 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=31.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
++|.|.| .|++|..++..|.+ .||+|+++++++.
T Consensus 4 ~kI~VIG-lG~~G~~~A~~La~-----~G~~V~~~D~~~~ 37 (415)
T PRK11064 4 ETISVIG-LGYIGLPTAAAFAS-----RQKQVIGVDINQH 37 (415)
T ss_pred cEEEEEC-cchhhHHHHHHHHh-----CCCEEEEEeCCHH
Confidence 6899999 79999999999998 8999999999764
No 454
>PRK08328 hypothetical protein; Provisional
Probab=89.10 E-value=2.6 Score=37.44 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=29.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 65 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 65 (397)
...+.+|+|.| .|-+|+.+++.|.. .|. ++++++.+.
T Consensus 24 ~L~~~~VlIiG-~GGlGs~ia~~La~-----~Gvg~i~lvD~D~ 61 (231)
T PRK08328 24 KLKKAKVAVVG-VGGLGSPVAYYLAA-----AGVGRILLIDEQT 61 (231)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCCc
Confidence 33457899999 69999999999998 565 488887653
No 455
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=89.01 E-value=0.52 Score=47.45 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCC-eeEE
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 101 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~-V~h~ 101 (397)
...+|+|.|.| .|.||+.+++.|.. .|++|++.+|..........+++. . ++++++++.+|. ++|+
T Consensus 135 ~l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~--~-----~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 135 ELYGKTLGVIG-LGRIGSIVAKRAKA-----FGMKVLAYDPYISPERAEQLGVEL--V-----DDLDELLARADFITVHT 201 (525)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEE--c-----CCHHHHHhhCCEEEEcc
Confidence 34678999999 79999999999988 799999999853221100112211 1 236677888886 4444
No 456
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=88.97 E-value=0.91 Score=40.06 Aligned_cols=68 Identities=19% Similarity=0.214 Sum_probs=41.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCCCCCCCCceEEEccCCCH--HHHHHHHccCCC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTD 97 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~~~ 97 (397)
....+|+|.| -|-+|++.++.|.+ .|. ++++++-+.-..-.....+....+|+..+ +.+++.+..+.+
T Consensus 28 l~~~~V~VvG-iGGVGSw~veALaR-----sGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP 98 (263)
T COG1179 28 LKQAHVCVVG-IGGVGSWAVEALAR-----SGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINP 98 (263)
T ss_pred HhhCcEEEEe-cCchhHHHHHHHHH-----cCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCC
Confidence 3456899999 68899999999998 666 47777765321111112344445555544 334555555444
No 457
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=88.90 E-value=0.58 Score=42.96 Aligned_cols=37 Identities=19% Similarity=0.014 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCC-cEEEEEeCCCC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK 66 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g-~~V~~l~R~~~ 66 (397)
..+++++|+|+ |-+|+.++..|.. .| .+|++++|+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~-----~g~~~V~v~~R~~~ 158 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLD-----LGVAEITIVNRTVE 158 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHH-----cCCCEEEEEeCCHH
Confidence 45578999995 9999999999997 67 68999999753
No 458
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=88.88 E-value=0.76 Score=44.61 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=29.7
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
.|+|.|.|+||.||+..++-+.+.+ ..++|++++=.
T Consensus 57 ~KkI~ILGSTGSIGtqtLdVI~~~p---d~f~vvaLaag 92 (454)
T PLN02696 57 PKPISLLGSTGSIGTQTLDIVAENP---DKFKVVALAAG 92 (454)
T ss_pred ccEEEEecCCcHhhHHHHHHHHhCc---cccEEEEEECC
Confidence 3799999999999999999887643 46889888754
No 459
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=88.88 E-value=0.49 Score=44.87 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=29.1
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
|+|.|.|+||.||+..++-+.+.+ ..++|++++=.
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~---~~f~v~~Laa~ 36 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNP---DHFQVVALSAG 36 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCc---cccEEEEEEcC
Confidence 789999999999999988876543 46899999854
No 460
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=88.85 E-value=0.62 Score=43.28 Aligned_cols=22 Identities=36% Similarity=0.517 Sum_probs=20.9
Q ss_pred CEEEEEcCCChhHHHHHHHccC
Q 015961 27 SVALIVGVTGIVGNSLAEILPL 48 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~ 48 (397)
++|.|.||||.+|+.+++.|.+
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e 23 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEE 23 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHh
Confidence 5899999999999999999987
No 461
>PLN02735 carbamoyl-phosphate synthase
Probab=88.84 E-value=1.2 Score=48.89 Aligned_cols=70 Identities=14% Similarity=0.187 Sum_probs=43.9
Q ss_pred CccCCCCCEEEEEcCCCh-h---------HHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHH
Q 015961 20 EPARSYQSVALIVGVTGI-V---------GNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ 89 (397)
Q Consensus 20 ~~~~~~~~~ILVtGatGf-i---------G~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~ 89 (397)
+|.....|||||+|+... | |..+++.|.+ .|++|++++.++........-...+..+..+.+.+.
T Consensus 17 ~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke-----~G~~Vi~vd~np~t~~~~~~~aD~~yi~p~~~e~v~ 91 (1102)
T PLN02735 17 AGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKE-----EGYEVVLINSNPATIMTDPETADRTYIAPMTPELVE 91 (1102)
T ss_pred CCcccCCCEEEEECCCccccccceeecchHHHHHHHHHH-----cCCEEEEEeCCcccccCChhhCcEEEeCCCCHHHHH
Confidence 455555689999995431 2 8889999999 899999999876321100011112233445667676
Q ss_pred HHHcc
Q 015961 90 AKLSQ 94 (397)
Q Consensus 90 ~~~~~ 94 (397)
+.++.
T Consensus 92 ~ii~~ 96 (1102)
T PLN02735 92 QVIAK 96 (1102)
T ss_pred HHHHH
Confidence 65554
No 462
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=88.73 E-value=0.48 Score=39.60 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=29.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
++|-+.| .|-+|+.+++.|++ .||+|++.+|++.
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~-----~g~~v~~~d~~~~ 35 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAK-----AGYEVTVYDRSPE 35 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHH-----TTTEEEEEESSHH
T ss_pred CEEEEEc-hHHHHHHHHHHHHh-----cCCeEEeeccchh
Confidence 6899999 79999999999998 8999999999753
No 463
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=88.73 E-value=0.89 Score=34.73 Aligned_cols=35 Identities=26% Similarity=0.159 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
.+++|||+|| |-+|.+-++.|++ .|.+|+.++...
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~-----~gA~v~vis~~~ 40 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLE-----AGAKVTVISPEI 40 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCC-----CTBEEEEEESSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEECCch
Confidence 4689999995 9999999999999 799999999874
No 464
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=88.59 E-value=0.58 Score=43.67 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
..+.+|||+||+|.+|..+++.+.. .|.+|+++++++
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~-----~g~~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKA-----LGARVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----cCCeEEEEeCCH
Confidence 3457899999999999999999988 799999998865
No 465
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=88.58 E-value=0.62 Score=40.49 Aligned_cols=35 Identities=20% Similarity=0.060 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
.+++|||.|| |-+|...++.|++ .|++|+++++..
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~-----~ga~V~VIs~~~ 43 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLK-----YGAHIVVISPEL 43 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHH-----CCCeEEEEcCCC
Confidence 4689999995 9999999999998 789999998653
No 466
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=88.57 E-value=0.49 Score=43.82 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
|.++|.|.| .|.+|..+++.|.+ .|++|++.+|++.
T Consensus 1 ~~~~IgviG-~G~mG~~~a~~l~~-----~g~~v~~~d~~~~ 36 (296)
T PRK11559 1 MTMKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVYDRNPE 36 (296)
T ss_pred CCceEEEEc-cCHHHHHHHHHHHH-----CCCeEEEEcCCHH
Confidence 446899999 79999999999998 7999999998753
No 467
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=88.41 E-value=0.28 Score=45.86 Aligned_cols=68 Identities=16% Similarity=0.099 Sum_probs=44.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC--CCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
..+++|+|.|+ |-+|..+++.|... .+.+|++++|++... ....-+. +..+.+++.+.+..+|.|+.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~----g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAK----GVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHc----CCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEEC
Confidence 34679999995 99999999999862 346799999976432 1000011 222334566777778766655
No 468
>PRK08605 D-lactate dehydrogenase; Validated
Probab=88.32 E-value=0.6 Score=44.03 Aligned_cols=62 Identities=19% Similarity=0.180 Sum_probs=41.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
..+++|.|.| .|.||+.+++.|.+. .|++|++.+|....... ..+ .. ..++.++++.+|.|+
T Consensus 144 l~g~~VgIIG-~G~IG~~vA~~L~~~----~g~~V~~~d~~~~~~~~--~~~-----~~--~~~l~ell~~aDvIv 205 (332)
T PRK08605 144 IKDLKVAVIG-TGRIGLAVAKIFAKG----YGSDVVAYDPFPNAKAA--TYV-----DY--KDTIEEAVEGADIVT 205 (332)
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHhc----CCCEEEEECCCccHhHH--hhc-----cc--cCCHHHHHHhCCEEE
Confidence 4568999999 799999999999431 58899998876433210 111 11 124667788888644
No 469
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=88.28 E-value=0.55 Score=35.11 Aligned_cols=33 Identities=33% Similarity=0.399 Sum_probs=27.6
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCC---cEEEEE-eCCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGV-ARRPK 66 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g---~~V~~l-~R~~~ 66 (397)
||.|.| +|.+|+.|++.|++ .| ++|+.. +|++.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~-----~g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLA-----SGIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHH-----TTS-GGEEEEEEESSHH
T ss_pred CEEEEC-CCHHHHHHHHHHHH-----CCCCceeEEeeccCcHH
Confidence 577886 89999999999998 67 899855 77764
No 470
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=88.18 E-value=1.7 Score=40.79 Aligned_cols=66 Identities=17% Similarity=0.102 Sum_probs=50.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
++|.|.| .|.+|+=++..-.. -|++|+.++-.+...-.. -.-..+..+..|++++.++...||.|.
T Consensus 2 ~tvgIlG-GGQLgrMm~~aa~~-----lG~~v~vLdp~~~~PA~~-va~~~i~~~~dD~~al~ela~~~DViT 67 (375)
T COG0026 2 KTVGILG-GGQLGRMMALAAAR-----LGIKVIVLDPDADAPAAQ-VADRVIVAAYDDPEALRELAAKCDVIT 67 (375)
T ss_pred CeEEEEc-CcHHHHHHHHHHHh-----cCCEEEEecCCCCCchhh-cccceeecCCCCHHHHHHHHhhCCEEE
Confidence 6899999 59999999988887 799999999765432100 012467788889999999999998643
No 471
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=88.09 E-value=2.4 Score=38.09 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 64 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~ 64 (397)
..++|+|.|+ |-+|+.+++.|.. .|. ++++++.+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~-----~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAA-----AGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence 4579999996 9999999999998 565 58888765
No 472
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=87.96 E-value=7 Score=32.31 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=30.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
.+|+|-||-|-+|++.++.+.. ++|-|.-++-..
T Consensus 4 grVivYGGkGALGSacv~~Fka-----nnywV~siDl~e 37 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKA-----NNYWVLSIDLSE 37 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHh-----cCeEEEEEeecc
Confidence 5899999999999999999998 799888887654
No 473
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.96 E-value=0.92 Score=41.45 Aligned_cols=55 Identities=16% Similarity=0.103 Sum_probs=41.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 103 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a~ 103 (397)
..+|+|.|.|.+|.+|..++..|++ +|+.|++...+. . ++.+..+.+|.|+-+.+
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~-----~gatVtv~~s~t-------~-------------~l~~~~~~ADIVI~avg 210 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLD-----KNATVTLTHSRT-------R-------------NLAEVARKADILVVAIG 210 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHH-----CCCEEEEECCCC-------C-------------CHHHHHhhCCEEEEecC
Confidence 4579999999999999999999998 799998872111 0 24566788887666543
No 474
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=87.88 E-value=1.3 Score=36.78 Aligned_cols=53 Identities=21% Similarity=0.128 Sum_probs=37.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 101 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~ 101 (397)
..+|+|+|.|.++.+|..|+..|.+ +|..|+...... .++++..+.+|.|+-.
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~-----~~atVt~~h~~T--------------------~~l~~~~~~ADIVVsa 86 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLN-----KGATVTICHSKT--------------------KNLQEITRRADIVVSA 86 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHH-----TT-EEEEE-TTS--------------------SSHHHHHTTSSEEEE-
T ss_pred CCCCEEEEECCcCCCChHHHHHHHh-----CCCeEEeccCCC--------------------CcccceeeeccEEeee
Confidence 4578999999999999999999998 788888766542 1245667777765554
No 475
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=87.68 E-value=0.58 Score=46.10 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=30.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
+++|+|||++| +|...++.|++ .|++|++.++..
T Consensus 5 ~k~v~v~G~g~-~G~s~a~~l~~-----~G~~V~~~d~~~ 38 (447)
T PRK02472 5 NKKVLVLGLAK-SGYAAAKLLHK-----LGANVTVNDGKP 38 (447)
T ss_pred CCEEEEEeeCH-HHHHHHHHHHH-----CCCEEEEEcCCC
Confidence 57899999987 99999999998 899999998764
No 476
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=87.65 E-value=0.89 Score=39.62 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=40.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCC---CCCCCCceEEEccCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVS 83 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~ 83 (397)
.+++|||.| .|-+|..-++.|++ .|.+|++++...... +....+++++..+..
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~-----~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~ 63 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLK-----AGAQLRVIAEELESELTLLAEQGGITWLARCFD 63 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHH-----CCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCC
Confidence 467999999 59999999999999 799999998754322 112247888888875
No 477
>PLN02775 Probable dihydrodipicolinate reductase
Probab=87.62 E-value=9 Score=35.07 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=32.3
Q ss_pred CccCCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEE-EeCCC
Q 015961 20 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRP 65 (397)
Q Consensus 20 ~~~~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~-l~R~~ 65 (397)
.+++.+..+|+|.|++|-+|+.+++.+.+ .+.++++ +++.+
T Consensus 5 ~~~~~~~i~V~V~Ga~G~MG~~~~~av~~-----~~~~Lv~~~~~~~ 46 (286)
T PLN02775 5 ASPPGSAIPIMVNGCTGKMGHAVAEAAVS-----AGLQLVPVSFTGP 46 (286)
T ss_pred CCCcCCCCeEEEECCCChHHHHHHHHHhc-----CCCEEEEEecccc
Confidence 34556667999999999999999999998 6788555 44443
No 478
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=87.57 E-value=3 Score=36.49 Aligned_cols=35 Identities=20% Similarity=0.106 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~ 65 (397)
...+|+|.| .|-+|+.+++.|.+ .|.. +++++.+.
T Consensus 27 ~~~~V~ViG-~GglGs~ia~~La~-----~Gvg~i~lvD~D~ 62 (212)
T PRK08644 27 KKAKVGIAG-AGGLGSNIAVALAR-----SGVGNLKLVDFDV 62 (212)
T ss_pred hCCCEEEEC-cCHHHHHHHHHHHH-----cCCCeEEEEeCCE
Confidence 457899999 69999999999998 6664 88888863
No 479
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=87.55 E-value=2 Score=40.92 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=30.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 65 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 65 (397)
..+..+|+|.| .|-+|+.+++.|.. .|. ++++++.+.
T Consensus 25 ~L~~~~VlivG-~GGlGs~~a~~La~-----~Gvg~i~lvD~D~ 62 (355)
T PRK05597 25 SLFDAKVAVIG-AGGLGSPALLYLAG-----AGVGHITIIDDDT 62 (355)
T ss_pred HHhCCeEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCE
Confidence 34557999999 59999999999998 676 488888764
No 480
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]
Probab=87.44 E-value=1.4 Score=42.59 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=37.5
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcE-EEEEeCCCCCCCCCCCCceEEEccCCCHH
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPNWNADHLVEYVQCDVSDPE 86 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~-V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~ 86 (397)
+.+|||.| +|-||..|++-|+. .|++ |++++-+.-........+=|.+-|+..+.
T Consensus 12 ~~riLvVG-aGGIGCELLKnLal-----~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsK 67 (603)
T KOG2013|consen 12 SGRILVVG-AGGIGCELLKNLAL-----TGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSK 67 (603)
T ss_pred cCeEEEEe-cCcccHHHHHHHHH-----hcCCeeEEEeccceeccchhhhheeehhhcCchH
Confidence 46899999 58899999999987 6765 88888765332111123345566676654
No 481
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=87.35 E-value=0.66 Score=39.53 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=28.2
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
+|.|.|| |.+|+.++..++. .|++|+.+++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~-----~G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFAR-----AGYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHH-----TTSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHHh-----CCCcEEEEECChH
Confidence 6899995 9999999999998 8999999999753
No 482
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=87.33 E-value=3.8 Score=33.21 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=27.1
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 65 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 65 (397)
+|+|.| .|-+|+.+++.|.. .|. ++++++.+.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~-----~Gv~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLAR-----SGVGKITLIDFDT 33 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEEcCCC
Confidence 589999 59999999999998 677 588888763
No 483
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=87.32 E-value=0.73 Score=44.76 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=30.2
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
.+|+|.| +|++|..++.+|.+ .|++|+++.|..
T Consensus 2 ~~vvIIG-aG~~G~~~A~~La~-----~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIG-AGITGVTTAYALAQ-----RGYQVTVFDRHR 34 (410)
T ss_pred CEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEeCCC
Confidence 4899999 59999999999998 799999999975
No 484
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=87.21 E-value=0.87 Score=35.86 Aligned_cols=30 Identities=33% Similarity=0.491 Sum_probs=25.8
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEE
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV 61 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l 61 (397)
+|.|+|++|.+|..+++.|.+. .+++|+++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~----~~~~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH----PDFEVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC----CCceEEEE
Confidence 5889999999999999999874 47787777
No 485
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=87.17 E-value=0.44 Score=44.19 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=29.9
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
+|.|.| .|.+|+.+++.|.+ .|++|++.+|++.
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~~-----~g~~V~~~dr~~~ 34 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLAK-----RGHDCVGYDHDQD 34 (298)
T ss_pred EEEEEc-chHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence 699999 79999999999998 7999999999764
No 486
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=86.90 E-value=0.82 Score=43.58 Aligned_cols=33 Identities=18% Similarity=0.382 Sum_probs=28.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEe
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA 62 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~ 62 (397)
|+|.|.|+||.||...++.+.+.+ +.++|++++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p---~~f~VvaLa 34 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNP---DRFRVVALS 34 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCc---cccEEEEEE
Confidence 789999999999999998887643 478999997
No 487
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=86.82 E-value=0.71 Score=42.00 Aligned_cols=36 Identities=11% Similarity=0.076 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCC---cEEEEEeCCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPK 66 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g---~~V~~l~R~~~ 66 (397)
|+++|.|.| +|.+|+.++..|.+ .| ++|++++|++.
T Consensus 1 ~mm~I~iIG-~G~mG~~la~~l~~-----~g~~~~~v~v~~r~~~ 39 (267)
T PRK11880 1 MMKKIGFIG-GGNMASAIIGGLLA-----SGVPAKDIIVSDPSPE 39 (267)
T ss_pred CCCEEEEEe-chHHHHHHHHHHHh-----CCCCcceEEEEcCCHH
Confidence 456899999 69999999999987 56 67999999753
No 488
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.82 E-value=1.4 Score=40.29 Aligned_cols=54 Identities=20% Similarity=0.183 Sum_probs=40.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCCCCCCCCCCceEEEccCCCHHHHHHHHccCCCeeEEE
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 102 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~h~a 102 (397)
..+++|+|.|.++.+|+.|+..|.+ +|..|+...+.. .++.+.++.+|.|+-.+
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~-----~~atVt~~hs~t--------------------~~l~~~~~~ADIVV~av 209 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQ-----AGATVTICHSKT--------------------RDLAAHTRQADIVVAAV 209 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEecCCC--------------------CCHHHHhhhCCEEEEcC
Confidence 3568999999999999999999998 788998764321 12456677788665553
No 489
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=86.74 E-value=1.3 Score=32.52 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=28.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeC
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 63 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R 63 (397)
...++++|.|+ |.+|..++..|.+. .+.+|++.+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~----~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADE----GGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHc----CCCEEEEEcC
Confidence 45579999996 99999999999982 2567888877
No 490
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=86.71 E-value=0.79 Score=42.48 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=29.5
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
++|+|.| +|-+|+.++..|.+ .|++|++++|++
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~-----~g~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQ-----AGHDVTLVARRG 33 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEEECCh
Confidence 3799999 59999999999998 799999999954
No 491
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=86.64 E-value=0.9 Score=42.80 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
...+.+|||+||+|-+|..+++.+.. .|.+|+++++++.
T Consensus 149 ~~~g~~VlI~Ga~G~vG~~aiqlAk~-----~G~~Vi~~~~~~~ 187 (338)
T cd08295 149 PKKGETVFVSAASGAVGQLVGQLAKL-----KGCYVVGSAGSDE 187 (338)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHH-----cCCEEEEEeCCHH
Confidence 34568999999999999999988777 7899999887653
No 492
>PRK08818 prephenate dehydrogenase; Provisional
Probab=86.64 E-value=0.86 Score=43.49 Aligned_cols=35 Identities=34% Similarity=0.336 Sum_probs=30.3
Q ss_pred CCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 26 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 26 ~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
..+|.|.|.+|.||..+++.|.+. .+++|+++++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~----~~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTR----MQLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhc----CCCEEEEEcCC
Confidence 368999999999999999999862 37899999874
No 493
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=86.57 E-value=0.76 Score=38.15 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=29.5
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
||.|.| +|..|++++..|.+ +|++|+...|++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~-----~g~~V~l~~~~~ 32 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLAD-----NGHEVTLWGRDE 32 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHH-----CTEEEEEETSCH
T ss_pred CEEEEC-cCHHHHHHHHHHHH-----cCCEEEEEeccH
Confidence 689999 69999999999998 899999999974
No 494
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.51 E-value=0.68 Score=42.68 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=30.4
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
++|.|.| .|.+|..++..|++ .|++|+++++++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAV-----SGFQTTLVDIKQE 35 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHh-----CCCcEEEEeCCHH
Confidence 5799999 59999999999998 7999999999753
No 495
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=86.38 E-value=5.5 Score=35.62 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCC
Q 015961 25 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 65 (397)
Q Consensus 25 ~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~ 65 (397)
...+|+|.| .|-+|+.++..|.. .|. ++++++++.
T Consensus 23 ~~~~VlvvG-~GglGs~va~~La~-----~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 23 KASRVLIVG-LGGLGCAASQYLAA-----AGVGNLTLLDFDT 58 (240)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEEeCCc
Confidence 346899999 69999999999998 565 588888764
No 496
>PRK06545 prephenate dehydrogenase; Validated
Probab=86.16 E-value=0.55 Score=44.85 Aligned_cols=34 Identities=32% Similarity=0.488 Sum_probs=29.3
Q ss_pred CEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 27 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 27 ~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
++|.|.| +|.+|..++..|.+ .|++|.+.++++.
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~-----~G~~v~i~~~~~~ 34 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKA-----AGPDVFIIGYDPS 34 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHh-----cCCCeEEEEeCCC
Confidence 4689998 79999999999998 7888888887654
No 497
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=86.12 E-value=1.1 Score=39.37 Aligned_cols=36 Identities=28% Similarity=0.181 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCC
Q 015961 23 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 64 (397)
Q Consensus 23 ~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~ 64 (397)
+.++++|+|.| -|.+|+++++.|.+ .|.+|++++-.
T Consensus 20 ~l~g~~vaIqG-fGnVG~~~a~~L~~-----~G~~vV~vsD~ 55 (217)
T cd05211 20 SLEGLTVAVQG-LGNVGWGLAKKLAE-----EGGKVLAVSDP 55 (217)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEEcC
Confidence 45678999999 79999999999998 78888777754
No 498
>PLN00203 glutamyl-tRNA reductase
Probab=86.07 E-value=0.39 Score=48.03 Aligned_cols=69 Identities=20% Similarity=0.128 Sum_probs=44.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHccCCCCCCCCc-EEEEEeCCCCCC--CC-CCCCceEEEccCCCHHHHHHHHccCCCee
Q 015961 24 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAKLSQLTDVT 99 (397)
Q Consensus 24 ~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~-~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~V~ 99 (397)
..+++|+|.|+ |-+|..+++.|.. .|. +|++++|..... .. ..+++... ....+++.+++.++|.|+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~-----~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVI 334 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVS-----KGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVF 334 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHh-----CCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEE
Confidence 34579999996 9999999999997 676 699999975432 10 00122211 122344566778888666
Q ss_pred EE
Q 015961 100 HI 101 (397)
Q Consensus 100 h~ 101 (397)
.+
T Consensus 335 sA 336 (519)
T PLN00203 335 TS 336 (519)
T ss_pred Ec
Confidence 54
No 499
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=86.07 E-value=0.87 Score=41.77 Aligned_cols=33 Identities=42% Similarity=0.516 Sum_probs=29.8
Q ss_pred EEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCCC
Q 015961 28 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 66 (397)
Q Consensus 28 ~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~~ 66 (397)
+|.|.| .|.+|..++..|.+ .|++|++.+|++.
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~-----~g~~V~~~d~~~~ 34 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRS-----LGHTVYGVSRRES 34 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence 699999 89999999999998 7999999998753
No 500
>PLN02712 arogenate dehydrogenase
Probab=86.03 E-value=1.1 Score=46.49 Aligned_cols=52 Identities=25% Similarity=0.265 Sum_probs=39.7
Q ss_pred ccccccccccCccCcc-----CCCCCEEEEEcCCChhHHHHHHHccCCCCCCCCcEEEEEeCCC
Q 015961 7 GAIGAARKKFEEDEPA-----RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 65 (397)
Q Consensus 7 ~~~~~~~~~~~~~~~~-----~~~~~~ILVtGatGfiG~~lv~~L~~~~~~~~g~~V~~l~R~~ 65 (397)
++++++|+ |+-+.+. ..++++|.|.| .|.+|..+++.|.+ .|++|++.+|+.
T Consensus 346 ~~~~~~~~-~~~~~~~~~~~~~~~~~kIgIIG-lG~mG~slA~~L~~-----~G~~V~~~dr~~ 402 (667)
T PLN02712 346 RFQGVAQK-YEYNAQVSGCVNDGSKLKIAIVG-FGNFGQFLAKTMVK-----QGHTVLAYSRSD 402 (667)
T ss_pred hhhcccCC-CCccchhhhccCCCCCCEEEEEe-cCHHHHHHHHHHHH-----CcCEEEEEECCh
Confidence 55677774 4333332 22557999999 89999999999998 789999999874
Done!