BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015966
(397 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80UY1|CI041_MOUSE UPF0586 protein C9orf41 homolog OS=Mus musculus PE=2 SV=1
Length = 400
Score = 265 bits (678), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 173/256 (67%), Gaps = 9/256 (3%)
Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 202
D+DK++ ++ VRDW+ GK ERD CYKPI++E+ FP R S LVPGAGLGR
Sbjct: 145 DMDKLKSTLKQFVRDWSETGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGR 204
Query: 203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
LA E++ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+
Sbjct: 205 LAWEVAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPI 264
Query: 263 SIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR 322
PD+ P S FSM GDF E+Y S+ AWD + TCFFIDTAHN+++YI+ I R
Sbjct: 265 LFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNAWDCIATCFFIDTAHNVIDYIDTIWR 321
Query: 323 ILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYT 381
ILK GG+WINLGPLLYHF +L +E+SIELS ED+K V L YGF+ E EK ++ +TYT
Sbjct: 322 ILKPGGIWINLGPLLYHFENL---ANELSIELSYEDIKNVVLQYGFQLEVEKESVLSTYT 378
Query: 382 TNPRSMMQVSFLPCTL 397
N SMM+ + C L
Sbjct: 379 VNDLSMMKY-YYECVL 393
>sp|Q5BJZ6|CI041_RAT UPF0586 protein C9orf41 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 400
Score = 265 bits (677), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 172/256 (67%), Gaps = 9/256 (3%)
Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 202
D+DK++ ++ VRDW+ GK ERD CYKPI++E+ FP R S LVPGAGLGR
Sbjct: 145 DMDKLKSTLKQFVRDWSGTGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGR 204
Query: 203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
LA EI+ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+
Sbjct: 205 LAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEVDKYKLYPWIHQFSNNRRSADQIRPI 264
Query: 263 SIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR 322
PD+ P S FSM GDF E+Y S+ WD + TCFFIDTAHN+++YI+ I R
Sbjct: 265 FFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNTWDCIATCFFIDTAHNVIDYIDTIWR 321
Query: 323 ILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYT 381
ILK GG+WINLGPLLYHF +L +E+SIELS ED+K V L YGF+ E EK ++ +TYT
Sbjct: 322 ILKPGGIWINLGPLLYHFENL---ANELSIELSYEDIKNVVLQYGFQLEVEKESVLSTYT 378
Query: 382 TNPRSMMQVSFLPCTL 397
N SMM+ + C L
Sbjct: 379 VNDLSMMKY-YYECVL 393
>sp|Q8N4J0|CI041_HUMAN UPF0586 protein C9orf41 OS=Homo sapiens GN=C9orf41 PE=1 SV=1
Length = 409
Score = 260 bits (665), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/256 (49%), Positives = 172/256 (67%), Gaps = 9/256 (3%)
Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 202
D+DK++ ++ VRDW+ GK ERD CY+PI++E+ FP R S LVPGAGLGR
Sbjct: 154 DMDKLKSTLKQFVRDWSETGKAERDACYQPIIKEILKNFPKERWDPSKVNILVPGAGLGR 213
Query: 203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
LA EI+ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+
Sbjct: 214 LAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPI 273
Query: 263 SIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR 322
PD+ P S FSM GDF E+Y S+ WD + TCFFIDTAHN+++YI+ I +
Sbjct: 274 FFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNTWDCIATCFFIDTAHNVIDYIDTIWK 330
Query: 323 ILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYT 381
ILK GG+WINLGPLLYHF +L +E+SIELS ED+K V L YGF+ E EK ++ +TYT
Sbjct: 331 ILKPGGIWINLGPLLYHFENL---ANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYT 387
Query: 382 TNPRSMMQVSFLPCTL 397
N SMM+ + C L
Sbjct: 388 VNDLSMMKY-YYECVL 402
>sp|Q9I7X6|U586_DROME UPF0586 protein CG11596 OS=Drosophila melanogaster GN=CG11596 PE=1
SV=1
Length = 439
Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 160/256 (62%), Gaps = 8/256 (3%)
Query: 139 NVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKE-SPPACLVPG 197
NV D+D+ + ++ I RDW+ EG ER+Q YKPI++ + A F + E LVPG
Sbjct: 119 NVRHGDMDQAQSTLKLIARDWSTEGALEREQSYKPIIDSIVAYFKHSDFELKDIKILVPG 178
Query: 198 AGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSD 257
AGLGRL E++ LG+ +GNEFSY+M+I S+F+LN + ++ +YPW+H N+L D
Sbjct: 179 AGLGRLTYELACLGYSCEGNEFSYFMLIASNFVLNLCDNENKYVLYPWVHQYVNNLRRED 238
Query: 258 QLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYI 317
Q+ PV PD+ P F + GDF+EVY P+ A++ V TCFFID A+N++++I
Sbjct: 239 QVAPVRFPDVCPLKNPPKGHFEIAAGDFLEVYKTPN---AYNCVATCFFIDCANNVIDFI 295
Query: 318 EIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT-I 376
I +IL GG+W+NLGPLLYHF+D+ GQ SIE + ED+ + GF EK +T I
Sbjct: 296 RTIYKILVPGGIWVNLGPLLYHFSDVSGQN---SIEPAFEDLCIIMESVGFVIEKSRTGI 352
Query: 377 ETTYTTNPRSMMQVSF 392
T Y NP SM Q +
Sbjct: 353 RTKYAQNPSSMKQSEY 368
>sp|Q9Y7J3|YOI7_SCHPO UPF0586 protein C1778.07 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC1778.07 PE=3 SV=1
Length = 373
Score = 215 bits (548), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 166/283 (58%), Gaps = 11/283 (3%)
Query: 122 GNASSPA-CDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDA 180
NA+ P C D + +V + + KV ++ I RDW+ E ER Y P +EEL++
Sbjct: 77 ANAAIPVFCSDFDQNELFHVNVDMMQKVSSTLKQIARDWSTECVEERRTTYAPFIEELNS 136
Query: 181 LFPNRS-KESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGE 239
LFP+ S S LVPG+GLGRLA +I+ GF QGNEFSY+M++ S FILN + +
Sbjct: 137 LFPSDSIDRSKIRVLVPGSGLGRLAFDIAVEGFACQGNEFSYFMLLTSHFILNCVKQENQ 196
Query: 240 WNIYPWIHSNCNSLSDSDQLRPVSIPDIHPAS-AGITEGFSMCGGDFVEVYSDPSQVGAW 298
+ +YP+IHS N + DQ+R ++IPD P+ ++ FSM GDF+EVY ++
Sbjct: 197 FLVYPYIHSFSNHVMRDDQVRSLNIPDAVPSQYLRNSQNFSMAAGDFLEVYGTEESRDSF 256
Query: 299 DAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMS------- 351
V TCFFIDT NI++Y++ I L DGG WINLGPLLYHF G + S
Sbjct: 257 QVVATCFFIDTTKNILDYLDTIKNCLVDGGYWINLGPLLYHFES-EGTSNSNSDSQQQPF 315
Query: 352 IELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQVSFLP 394
+EL+LE + V GFE K +++TTY + RSM++ + P
Sbjct: 316 VELTLEQLFYVMDSMGFEVLKHNSVDTTYMGDKRSMLEWIYHP 358
>sp|Q54ST2|U586_DICDI UPF0586 protein OS=Dictyostelium discoideum GN=DDB_G0282239 PE=3
SV=1
Length = 463
Score = 211 bits (536), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 178/292 (60%), Gaps = 27/292 (9%)
Query: 110 NQSCSNDFTDSNGNASSPACDWLDPSI--QLNVPLADVDKVRCIIRNIVRDWAAEGKTER 167
N+ C N F+ S+ N+++ +DP+ + + +D+++ IR +VR+W+ EGK ER
Sbjct: 171 NEHC-NIFSQSSDNSANSE-RIVDPTNLDHIKIDYFMMDQLKSTIRQLVREWSEEGKLER 228
Query: 168 DQCYKPILEELDAL-----FPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYY 222
DQ ++PI ++L + F RSK PGAGLGRL LEI+ LGF SQG E+S+
Sbjct: 229 DQAFEPIKQQLLEIYGHIPFQERSK---IRVYSPGAGLGRLCLEIASLGFSSQGIEYSFM 285
Query: 223 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI-----HPASAGITEG 277
M+I S+F+LN E E+ I+P+IH N L D DQLR V+IPD+ P + E
Sbjct: 286 MLIVSNFMLNKVEKINEFKIHPYIHQTVNVLRDIDQLRTVTIPDVLSSELLPKNNPALE- 344
Query: 278 FSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL 337
FSM GDF + + S +D + TCFFIDTA NI+EY++ IS+ILK GG WIN GPLL
Sbjct: 345 FSMSAGDFTKNIEENS----FDCICTCFFIDTAPNILEYVDCISKILKPGGTWINFGPLL 400
Query: 338 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQ 389
YH A + + SIELS E ++ + F+F+KE+ + Y +N +S+++
Sbjct: 401 YHHA-----KKKDSIELSYEQLRYLICKKQFQFKKEEIRDAEYCSNQKSLLR 447
>sp|P53934|YNJ2_YEAST UPF0586 protein YNL092W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YNL092W PE=1 SV=1
Length = 400
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 136/273 (49%), Gaps = 46/273 (16%)
Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRL 203
D+ K ++ + R+W+AE +ER+ ++ L L P ++ L+PG G GRL
Sbjct: 98 DMSKTCSLLTQVYREWSAEAISERNCLNSRLVPFLKTLSPPKAD-----ILIPGCGTGRL 152
Query: 204 ALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 263
+++S +G+ +GNEFSY+M++ S ++LN + IYP+IH + DQL P+
Sbjct: 153 LVDLSRMGYNCEGNEFSYHMLLVSQYMLNAGLLQNQIIIYPFIHCFSHWKKIEDQLSPIK 212
Query: 264 IPDIHPASAGITEG-FSMCGGDFVEVY--------------------SDPSQVGAWDAVV 302
+PDI S+ G S+C G FV+ Y S + D VV
Sbjct: 213 VPDIEAWSSNKGMGSMSICAGSFVDCYGRNQGTKISSHYTFSRRMQLSRAKAENSKDVVV 272
Query: 303 TCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDE------------- 349
T FFIDT NI++Y++ I +LK GG+W N GPLLYHF + +G E
Sbjct: 273 TNFFIDTGSNILDYLDTIGHVLKPGGIWCNFGPLLYHFENDHGVETTYEVNPYSGFQDKI 332
Query: 350 ------MSIELSLEDVKRVAL-HYGFEFEKEKT 375
M +ELS +D+ +A H FE + ++
Sbjct: 333 NDYTPLMGLELSSDDIISIATNHLDFELIRRES 365
>sp|Q03648|YM59_YEAST Uncharacterized protein YMR209C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR209C PE=1 SV=1
Length = 457
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 152 IRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLV-PGAGLGRLA--LEIS 208
+ ++ RD+++ ERD I+ ++ + +V PGAG+G L+ L +
Sbjct: 210 LAHLCRDFSSYYSVERDPLQNFIISRINHHVISAGDMKEKILIVTPGAGVGGLSHTLATT 269
Query: 209 HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS-NCNSLSDSDQLRPVSIPDI 267
E S M IC+ F L E + I P++ +C ++ D +QLR +S D+
Sbjct: 270 FPKIQVDSIELSALMYICNLFAL---EYKHDVKIRPFVQQYSCQTVFD-NQLRSLS-ADL 324
Query: 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEY---IEIISR 322
+ G GDF YS S+ +D ++ C +FIDTA N+ EY IE + +
Sbjct: 325 --SKVGHRSNLDPLWGDFTR-YSPISK--DYDKIIICSAYFIDTAENMFEYLSSIEALKK 379
Query: 323 ILKDGGVWINLGPLLY 338
K+ W+N+GPL Y
Sbjct: 380 YCKELH-WVNVGPLKY 394
>sp|Q66L51|COQ5_DANRE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Danio rerio GN=coq5 PE=2 SV=1
Length = 327
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 272 AGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331
AGIT G S GD E+ D Q +D F I +I + ++ R+LK GG ++
Sbjct: 187 AGITTGLSWVAGDAEELPFDDDQ---FDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFM 243
Query: 332 NL------GPLLYHFADLY 344
L PLL D Y
Sbjct: 244 CLEFSKVTNPLLARLYDAY 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,492,288
Number of Sequences: 539616
Number of extensions: 6712816
Number of successful extensions: 15977
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 15860
Number of HSP's gapped (non-prelim): 102
length of query: 397
length of database: 191,569,459
effective HSP length: 120
effective length of query: 277
effective length of database: 126,815,539
effective search space: 35127904303
effective search space used: 35127904303
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)