Query 015966
Match_columns 397
No_of_seqs 245 out of 888
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 05:37:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015966.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015966hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pjz_A Thiopurine S-methyltran 99.8 6E-18 2.1E-22 153.6 13.3 162 173-374 10-174 (203)
2 3l8d_A Methyltransferase; stru 99.7 1.3E-16 4.5E-21 145.3 18.3 153 172-375 41-199 (242)
3 3lcc_A Putative methyl chlorid 99.7 4.4E-17 1.5E-21 149.0 14.6 154 190-391 67-224 (235)
4 2gb4_A Thiopurine S-methyltran 99.7 8.5E-17 2.9E-21 152.4 15.8 156 189-374 68-225 (252)
5 3e23_A Uncharacterized protein 99.7 9.9E-17 3.4E-21 144.1 14.6 158 174-387 33-194 (211)
6 3h2b_A SAM-dependent methyltra 99.7 2.1E-16 7.3E-21 140.8 16.1 138 190-375 42-181 (203)
7 1ri5_A MRNA capping enzyme; me 99.7 5.1E-17 1.7E-21 152.1 12.2 148 189-376 64-250 (298)
8 3e8s_A Putative SAM dependent 99.7 4.6E-16 1.6E-20 139.1 17.4 177 146-375 11-208 (227)
9 2p7i_A Hypothetical protein; p 99.7 9.3E-17 3.2E-21 145.4 12.8 152 170-374 29-197 (250)
10 4htf_A S-adenosylmethionine-de 99.7 2.8E-16 9.6E-21 147.9 16.4 155 189-383 68-241 (285)
11 2kw5_A SLR1183 protein; struct 99.7 5.8E-16 2E-20 137.9 15.9 138 192-374 32-169 (202)
12 3ou2_A SAM-dependent methyltra 99.7 4.1E-16 1.4E-20 139.2 14.9 139 189-374 46-203 (218)
13 3g5l_A Putative S-adenosylmeth 99.7 5.9E-16 2E-20 142.7 16.4 152 175-374 33-214 (253)
14 4gek_A TRNA (CMO5U34)-methyltr 99.7 5.4E-16 1.8E-20 147.6 16.3 142 189-373 70-242 (261)
15 3dli_A Methyltransferase; PSI- 99.7 4.5E-16 1.5E-20 143.0 15.0 151 173-374 27-182 (240)
16 2i62_A Nicotinamide N-methyltr 99.7 2.8E-16 9.5E-21 144.7 12.5 182 189-381 56-244 (265)
17 2a14_A Indolethylamine N-methy 99.7 2.8E-16 9.5E-21 147.8 11.5 192 172-375 39-237 (263)
18 3dh0_A SAM dependent methyltra 99.7 1.2E-15 4.3E-20 137.1 14.9 140 189-374 37-179 (219)
19 3pfg_A N-methyltransferase; N, 99.7 8E-16 2.8E-20 142.9 14.0 107 173-332 39-149 (263)
20 3hnr_A Probable methyltransfer 99.7 2.1E-15 7E-20 135.8 16.1 152 170-375 33-200 (220)
21 1y8c_A S-adenosylmethionine-de 99.6 3.4E-15 1.2E-19 135.3 15.7 116 172-332 21-140 (246)
22 1nkv_A Hypothetical protein YJ 99.6 1.7E-15 5.8E-20 139.3 13.7 158 170-373 20-184 (256)
23 3ujc_A Phosphoethanolamine N-m 99.6 3.3E-15 1.1E-19 137.3 14.8 144 188-375 54-205 (266)
24 3sm3_A SAM-dependent methyltra 99.6 3.8E-15 1.3E-19 134.2 14.9 149 189-374 30-205 (235)
25 3hem_A Cyclopropane-fatty-acyl 99.6 7.3E-15 2.5E-19 139.8 17.6 159 174-380 60-247 (302)
26 3dtn_A Putative methyltransfer 99.6 7.1E-15 2.4E-19 133.7 16.7 157 171-374 28-212 (234)
27 2p35_A Trans-aconitate 2-methy 99.6 1.5E-15 5E-20 139.7 12.3 148 175-373 22-187 (259)
28 3d2l_A SAM-dependent methyltra 99.6 9.6E-15 3.3E-19 132.7 17.6 113 170-332 19-135 (243)
29 3dlc_A Putative S-adenosyl-L-m 99.6 9E-16 3.1E-20 136.5 10.5 159 171-374 29-201 (219)
30 3cc8_A Putative methyltransfer 99.6 1.7E-15 5.8E-20 135.7 12.3 156 174-380 21-189 (230)
31 3bus_A REBM, methyltransferase 99.6 8.9E-15 3E-19 136.0 17.6 159 174-376 49-216 (273)
32 1vl5_A Unknown conserved prote 99.6 2.4E-15 8.3E-20 139.4 13.5 143 189-374 37-188 (260)
33 3jwh_A HEN1; methyltransferase 99.6 3.9E-15 1.3E-19 134.5 14.5 149 189-374 29-190 (217)
34 3ccf_A Cyclopropane-fatty-acyl 99.6 1.1E-15 3.8E-20 143.7 11.1 138 189-374 57-208 (279)
35 3g2m_A PCZA361.24; SAM-depende 99.6 8E-15 2.7E-19 139.4 17.0 116 173-332 70-188 (299)
36 3bkw_A MLL3908 protein, S-aden 99.6 7.4E-15 2.5E-19 133.5 15.8 149 178-374 35-212 (243)
37 1kpg_A CFA synthase;, cyclopro 99.6 1E-14 3.6E-19 137.0 16.7 154 174-376 52-228 (287)
38 2ex4_A Adrenal gland protein A 99.6 2.8E-15 9.5E-20 137.8 12.3 142 189-374 79-223 (241)
39 2xvm_A Tellurite resistance pr 99.6 7.7E-15 2.6E-19 129.2 14.4 138 189-374 32-171 (199)
40 1xtp_A LMAJ004091AAA; SGPP, st 99.6 5.3E-15 1.8E-19 135.6 13.9 142 189-375 93-237 (254)
41 1wzn_A SAM-dependent methyltra 99.6 1.1E-14 3.7E-19 133.9 15.9 100 189-332 41-143 (252)
42 2o57_A Putative sarcosine dime 99.6 1.2E-14 4.2E-19 137.2 16.3 141 189-374 82-232 (297)
43 3f4k_A Putative methyltransfer 99.6 1.4E-14 4.9E-19 133.2 15.8 155 174-374 33-194 (257)
44 3jwg_A HEN1, methyltransferase 99.6 1.3E-14 4.3E-19 131.0 14.7 149 189-374 29-190 (219)
45 3vc1_A Geranyl diphosphate 2-C 99.6 1.7E-14 6E-19 138.3 16.1 155 176-374 106-267 (312)
46 3kkz_A Uncharacterized protein 99.6 1.5E-14 5.1E-19 134.9 15.1 157 173-375 32-195 (267)
47 3bxo_A N,N-dimethyltransferase 99.6 2.4E-14 8.3E-19 129.7 15.8 107 173-332 29-139 (239)
48 2fk8_A Methoxy mycolic acid sy 99.6 1.3E-14 4.3E-19 138.9 14.6 154 174-375 78-253 (318)
49 2yqz_A Hypothetical protein TT 99.6 6.1E-15 2.1E-19 135.6 11.6 159 170-373 22-193 (263)
50 2g72_A Phenylethanolamine N-me 99.6 3.4E-15 1.2E-19 141.3 10.1 185 174-374 57-254 (289)
51 1xxl_A YCGJ protein; structura 99.6 2.1E-14 7.1E-19 132.3 14.9 144 189-374 21-172 (239)
52 3i9f_A Putative type 11 methyl 99.6 1.1E-14 3.8E-19 126.2 11.5 130 189-374 17-146 (170)
53 1ve3_A Hypothetical protein PH 99.6 8.1E-14 2.8E-18 125.3 17.5 127 159-333 13-141 (227)
54 3ege_A Putative methyltransfer 99.6 1.9E-14 6.6E-19 134.4 13.7 152 171-375 19-177 (261)
55 3gu3_A Methyltransferase; alph 99.5 5.3E-14 1.8E-18 133.2 15.0 156 173-374 8-188 (284)
56 3cgg_A SAM-dependent methyltra 99.5 1.2E-13 4.1E-18 120.3 16.0 125 189-374 46-173 (195)
57 3thr_A Glycine N-methyltransfe 99.5 1.1E-13 3.7E-18 130.2 16.7 108 189-331 57-172 (293)
58 2p8j_A S-adenosylmethionine-de 99.5 3.9E-14 1.3E-18 126.1 12.7 155 170-374 10-181 (209)
59 3m70_A Tellurite resistance pr 99.5 6.5E-14 2.2E-18 131.8 14.7 146 172-373 110-257 (286)
60 4hg2_A Methyltransferase type 99.5 3E-14 1E-18 135.6 11.1 106 173-332 28-133 (257)
61 3mgg_A Methyltransferase; NYSG 99.5 9.3E-14 3.2E-18 129.6 13.5 144 189-374 37-196 (276)
62 1vlm_A SAM-dependent methyltra 99.5 1.6E-13 5.6E-18 124.4 14.4 146 170-374 34-186 (219)
63 3ggd_A SAM-dependent methyltra 99.5 1.9E-13 6.6E-18 125.3 14.8 154 175-374 44-217 (245)
64 3grz_A L11 mtase, ribosomal pr 99.5 1.5E-13 5.2E-18 123.0 13.6 134 173-374 49-183 (205)
65 3ofk_A Nodulation protein S; N 99.5 1.4E-13 4.8E-18 123.6 13.2 130 189-371 51-183 (216)
66 3ocj_A Putative exported prote 99.5 4.9E-13 1.7E-17 127.8 17.2 145 189-375 118-290 (305)
67 4e2x_A TCAB9; kijanose, tetron 99.5 8.4E-14 2.9E-18 138.6 11.9 157 172-375 93-252 (416)
68 1zx0_A Guanidinoacetate N-meth 99.5 7E-14 2.4E-18 128.5 10.4 151 173-370 48-204 (236)
69 3m33_A Uncharacterized protein 99.5 9.9E-14 3.4E-18 126.9 11.1 117 189-374 48-165 (226)
70 2vdw_A Vaccinia virus capping 99.5 4.5E-13 1.5E-17 130.0 16.1 152 189-375 48-245 (302)
71 3g07_A 7SK snRNA methylphospha 99.5 9.6E-14 3.3E-18 132.8 10.9 176 189-373 46-266 (292)
72 4fsd_A Arsenic methyltransfera 99.5 1.8E-13 6.1E-18 136.0 12.4 150 189-372 83-247 (383)
73 3mti_A RRNA methylase; SAM-dep 99.5 3.6E-13 1.2E-17 118.4 12.9 138 189-375 22-168 (185)
74 2pxx_A Uncharacterized protein 99.5 2.2E-13 7.4E-18 121.0 11.3 114 171-333 29-158 (215)
75 3e05_A Precorrin-6Y C5,15-meth 99.5 1.5E-12 5.1E-17 116.6 16.9 123 189-372 40-164 (204)
76 3mq2_A 16S rRNA methyltransfer 99.5 2.3E-13 8E-18 122.9 11.0 148 189-376 27-184 (218)
77 3orh_A Guanidinoacetate N-meth 99.5 1E-13 3.5E-18 128.9 8.5 153 173-372 48-206 (236)
78 2avn_A Ubiquinone/menaquinone 99.5 5.6E-13 1.9E-17 124.2 13.2 175 143-375 15-212 (260)
79 3bgv_A MRNA CAP guanine-N7 met 99.4 1.2E-12 4.3E-17 125.2 15.6 165 173-374 23-230 (313)
80 2aot_A HMT, histamine N-methyl 99.4 7.4E-13 2.5E-17 125.8 13.8 190 143-373 10-218 (292)
81 2nxc_A L11 mtase, ribosomal pr 99.4 1.3E-12 4.6E-17 122.8 15.4 133 174-374 110-242 (254)
82 1xdz_A Methyltransferase GIDB; 99.4 1.4E-12 4.9E-17 120.5 14.9 129 189-375 70-201 (240)
83 3njr_A Precorrin-6Y methylase; 99.4 2.6E-12 9E-17 116.8 16.3 124 189-374 55-178 (204)
84 2zfu_A Nucleomethylin, cerebra 99.4 2E-12 6.8E-17 116.3 14.5 141 146-374 37-177 (215)
85 3g5t_A Trans-aconitate 3-methy 99.4 8.7E-13 3E-17 125.3 12.8 152 172-368 23-196 (299)
86 2r3s_A Uncharacterized protein 99.4 2.6E-12 9E-17 123.2 16.2 145 189-376 165-323 (335)
87 2gs9_A Hypothetical protein TT 99.4 3.3E-12 1.1E-16 114.2 15.6 127 189-367 36-171 (211)
88 3g89_A Ribosomal RNA small sub 99.4 2E-12 6.9E-17 121.9 14.8 184 145-388 33-224 (249)
89 3bkx_A SAM-dependent methyltra 99.4 3.4E-12 1.2E-16 118.7 16.1 149 189-376 43-219 (275)
90 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.4E-12 8.2E-17 111.5 13.6 124 189-373 25-150 (178)
91 3p2e_A 16S rRNA methylase; met 99.4 5.1E-13 1.8E-17 124.0 9.8 154 189-380 24-189 (225)
92 3r0q_C Probable protein argini 99.4 1.4E-12 4.9E-17 129.8 12.9 113 173-331 50-166 (376)
93 3evz_A Methyltransferase; NYSG 99.4 2.3E-12 8E-17 117.0 13.1 129 189-374 55-204 (230)
94 1nt2_A Fibrillarin-like PRE-rR 99.4 8.3E-12 2.8E-16 114.5 16.8 136 189-381 57-199 (210)
95 3q87_B N6 adenine specific DNA 99.4 5.5E-12 1.9E-16 111.2 14.6 116 189-374 23-147 (170)
96 3p9n_A Possible methyltransfer 99.4 3.2E-12 1.1E-16 113.3 12.8 115 174-332 33-151 (189)
97 1fbn_A MJ fibrillarin homologu 99.4 6.8E-12 2.3E-16 115.2 15.1 136 189-375 74-212 (230)
98 1l3i_A Precorrin-6Y methyltran 99.4 4.3E-12 1.5E-16 110.1 13.0 124 189-372 33-156 (192)
99 1dus_A MJ0882; hypothetical pr 99.4 7.1E-12 2.4E-16 108.9 13.9 115 174-332 40-155 (194)
100 2fyt_A Protein arginine N-meth 99.4 2.8E-12 9.6E-17 126.0 12.5 101 189-331 64-168 (340)
101 3dp7_A SAM-dependent methyltra 99.4 6.6E-12 2.2E-16 123.7 15.1 144 189-374 179-340 (363)
102 3iv6_A Putative Zn-dependent a 99.4 2.1E-12 7.3E-17 123.9 11.1 109 174-331 33-145 (261)
103 3lpm_A Putative methyltransfer 99.4 1.2E-11 4E-16 115.8 15.8 131 189-375 49-200 (259)
104 3q7e_A Protein arginine N-meth 99.4 2.7E-12 9.1E-17 126.5 11.4 101 189-331 66-170 (349)
105 1jsx_A Glucose-inhibited divis 99.3 8.6E-12 2.9E-16 111.2 13.4 118 190-374 66-186 (207)
106 1g6q_1 HnRNP arginine N-methyl 99.3 5.5E-12 1.9E-16 123.1 12.7 101 189-331 38-142 (328)
107 3fpf_A Mtnas, putative unchara 99.3 6.9E-12 2.3E-16 122.9 13.2 98 188-332 121-220 (298)
108 3opn_A Putative hemolysin; str 99.3 4.5E-13 1.5E-17 125.5 4.6 152 189-388 37-197 (232)
109 2frn_A Hypothetical protein PH 99.3 5.1E-12 1.7E-16 120.5 11.9 128 189-372 125-253 (278)
110 1g8a_A Fibrillarin-like PRE-rR 99.3 2.8E-11 9.5E-16 110.1 16.2 141 189-381 73-216 (227)
111 3eey_A Putative rRNA methylase 99.3 6.7E-12 2.3E-16 111.3 11.8 104 189-332 22-137 (197)
112 3mcz_A O-methyltransferase; ad 99.3 1.9E-11 6.3E-16 118.7 15.7 143 190-373 180-336 (352)
113 1ws6_A Methyltransferase; stru 99.3 3.5E-12 1.2E-16 109.5 9.2 100 189-332 41-145 (171)
114 2yxd_A Probable cobalt-precorr 99.3 2.5E-11 8.4E-16 104.8 14.6 132 174-373 23-154 (183)
115 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.4E-11 4.9E-16 112.5 13.8 128 189-373 38-176 (213)
116 3mb5_A SAM-dependent methyltra 99.3 7.2E-12 2.5E-16 115.7 11.7 138 170-373 77-219 (255)
117 2ipx_A RRNA 2'-O-methyltransfe 99.3 2.3E-11 7.8E-16 111.5 14.8 136 189-374 77-215 (233)
118 3gwz_A MMCR; methyltransferase 99.3 4E-11 1.4E-15 118.3 17.5 154 175-375 191-355 (369)
119 1yzh_A TRNA (guanine-N(7)-)-me 99.3 9.5E-12 3.3E-16 112.6 11.9 129 189-374 41-180 (214)
120 1x19_A CRTF-related protein; m 99.3 3.3E-11 1.1E-15 117.8 16.2 155 174-375 178-347 (359)
121 3ntv_A MW1564 protein; rossman 99.3 1.7E-11 5.8E-16 113.0 13.3 102 189-332 71-174 (232)
122 3u81_A Catechol O-methyltransf 99.3 2.3E-11 8E-16 110.7 13.9 141 143-332 20-168 (221)
123 2b3t_A Protein methyltransfera 99.3 3E-11 1E-15 114.0 14.8 136 173-372 97-259 (276)
124 3dmg_A Probable ribosomal RNA 99.3 5.1E-12 1.7E-16 126.9 9.6 118 173-334 218-340 (381)
125 4df3_A Fibrillarin-like rRNA/T 99.3 2.2E-11 7.5E-16 115.3 13.3 163 155-375 51-216 (233)
126 3gdh_A Trimethylguanosine synt 99.3 1.1E-12 3.9E-17 120.1 4.1 136 189-372 78-215 (241)
127 1yb2_A Hypothetical protein TA 99.3 9.6E-12 3.3E-16 117.5 10.6 123 189-374 110-235 (275)
128 1qzz_A RDMB, aclacinomycin-10- 99.3 4.8E-11 1.6E-15 116.5 15.9 144 189-376 182-339 (374)
129 2ift_A Putative methylase HI07 99.3 9E-12 3.1E-16 112.7 10.0 104 190-332 54-161 (201)
130 2pwy_A TRNA (adenine-N(1)-)-me 99.3 9.6E-12 3.3E-16 114.3 10.1 138 170-372 80-220 (258)
131 4dzr_A Protein-(glutamine-N5) 99.3 4.4E-12 1.5E-16 112.3 7.5 142 174-373 17-189 (215)
132 2ip2_A Probable phenazine-spec 99.3 4.7E-11 1.6E-15 115.0 15.2 153 175-375 157-321 (334)
133 3tfw_A Putative O-methyltransf 99.3 2.8E-11 9.7E-16 113.0 13.0 103 189-332 63-168 (248)
134 2esr_A Methyltransferase; stru 99.3 8.9E-12 3.1E-16 108.7 8.9 103 189-332 31-136 (177)
135 3i53_A O-methyltransferase; CO 99.3 6.9E-11 2.4E-15 114.2 15.7 144 189-376 169-321 (332)
136 3bwc_A Spermidine synthase; SA 99.3 3.3E-11 1.1E-15 116.7 13.0 138 189-374 95-238 (304)
137 1tw3_A COMT, carminomycin 4-O- 99.3 5.6E-11 1.9E-15 115.7 14.3 143 189-375 183-338 (360)
138 3hp7_A Hemolysin, putative; st 99.3 2.1E-11 7E-16 119.0 11.1 135 189-373 85-229 (291)
139 3lbf_A Protein-L-isoaspartate 99.3 3.4E-11 1.2E-15 107.8 11.6 110 172-332 63-172 (210)
140 3bzb_A Uncharacterized protein 99.2 5.6E-11 1.9E-15 113.3 13.8 155 174-373 67-234 (281)
141 2qe6_A Uncharacterized protein 99.2 5.5E-11 1.9E-15 113.5 13.6 133 190-372 78-238 (274)
142 1p91_A Ribosomal RNA large sub 99.2 2.1E-11 7.3E-16 113.4 10.4 104 174-335 74-179 (269)
143 3uwp_A Histone-lysine N-methyl 99.2 3.2E-11 1.1E-15 123.4 12.6 149 146-333 123-287 (438)
144 2fhp_A Methylase, putative; al 99.2 2.1E-11 7.1E-16 106.3 9.5 103 189-332 44-152 (187)
145 3htx_A HEN1; HEN1, small RNA m 99.2 1.8E-10 6.3E-15 126.0 18.6 149 189-374 721-896 (950)
146 1o9g_A RRNA methyltransferase; 99.2 5.2E-11 1.8E-15 110.4 12.2 136 189-332 51-212 (250)
147 4hc4_A Protein arginine N-meth 99.2 2.7E-11 9.2E-16 122.0 10.8 118 165-331 65-186 (376)
148 3duw_A OMT, O-methyltransferas 99.2 6.8E-11 2.3E-15 107.0 12.4 107 189-336 58-169 (223)
149 1o54_A SAM-dependent O-methylt 99.2 8.6E-11 2.9E-15 110.7 13.5 138 171-374 97-237 (277)
150 2h00_A Methyltransferase 10 do 99.2 1.9E-11 6.7E-16 113.1 8.9 148 189-374 65-236 (254)
151 3dxy_A TRNA (guanine-N(7)-)-me 99.2 2.9E-11 9.9E-16 111.6 9.8 104 189-332 34-148 (218)
152 1vbf_A 231AA long hypothetical 99.2 6.3E-11 2.2E-15 107.5 11.9 110 170-332 54-163 (231)
153 2y1w_A Histone-arginine methyl 99.2 4.2E-11 1.4E-15 117.8 11.5 100 189-331 50-152 (348)
154 2fpo_A Methylase YHHF; structu 99.2 4.8E-11 1.6E-15 108.0 11.0 101 190-332 55-158 (202)
155 3tr6_A O-methyltransferase; ce 99.2 4.2E-11 1.4E-15 108.3 10.5 112 174-332 55-172 (225)
156 2pjd_A Ribosomal RNA small sub 99.2 4.8E-12 1.6E-16 123.9 4.2 114 174-335 184-304 (343)
157 3dr5_A Putative O-methyltransf 99.2 6E-11 2E-15 109.7 11.2 121 173-339 43-167 (221)
158 3reo_A (ISO)eugenol O-methyltr 99.2 2.8E-10 9.4E-15 112.6 16.6 145 175-374 191-353 (368)
159 1wy7_A Hypothetical protein PH 99.2 2.3E-10 7.9E-15 102.1 14.5 120 189-372 49-171 (207)
160 1ej0_A FTSJ; methyltransferase 99.2 3.7E-11 1.3E-15 102.1 8.0 119 189-374 22-159 (180)
161 3tma_A Methyltransferase; thum 99.2 3.6E-10 1.2E-14 110.8 15.7 138 174-376 191-339 (354)
162 2ozv_A Hypothetical protein AT 99.2 2E-10 6.7E-15 108.3 13.2 132 189-373 36-191 (260)
163 3fzg_A 16S rRNA methylase; met 99.2 3.3E-11 1.1E-15 111.9 7.6 122 164-334 29-152 (200)
164 3p9c_A Caffeic acid O-methyltr 99.2 2.6E-10 9E-15 112.7 14.5 146 175-375 189-352 (364)
165 3c3p_A Methyltransferase; NP_9 99.2 9E-11 3.1E-15 105.7 9.9 100 189-332 56-158 (210)
166 2igt_A SAM dependent methyltra 99.2 2.6E-10 8.9E-15 112.3 14.0 134 189-374 153-302 (332)
167 4dcm_A Ribosomal RNA large sub 99.2 2.6E-11 8.7E-16 121.3 6.9 116 176-335 212-335 (375)
168 2yvl_A TRMI protein, hypotheti 99.2 2.7E-10 9.2E-15 104.0 13.0 136 171-372 76-211 (248)
169 3kr9_A SAM-dependent methyltra 99.2 7.4E-10 2.5E-14 104.3 16.2 134 175-374 6-141 (225)
170 3lec_A NADB-rossmann superfami 99.2 6E-10 2.1E-14 105.3 15.5 134 175-374 12-147 (230)
171 3lst_A CALO1 methyltransferase 99.2 4.1E-10 1.4E-14 109.9 14.7 140 189-375 184-335 (348)
172 3ckk_A TRNA (guanine-N(7)-)-me 99.1 7.9E-11 2.7E-15 110.0 8.9 110 189-332 46-166 (235)
173 3id6_C Fibrillarin-like rRNA/T 99.1 8.1E-10 2.8E-14 104.2 15.8 166 156-382 51-221 (232)
174 2yxe_A Protein-L-isoaspartate 99.1 1.9E-10 6.6E-15 103.2 10.9 110 172-332 63-175 (215)
175 2gpy_A O-methyltransferase; st 99.1 1.2E-10 4E-15 106.5 9.2 103 189-332 54-158 (233)
176 2ld4_A Anamorsin; methyltransf 99.1 4.4E-11 1.5E-15 104.6 6.0 120 188-372 11-131 (176)
177 1fp1_D Isoliquiritigenin 2'-O- 99.1 1.9E-10 6.7E-15 113.2 11.0 146 176-375 198-359 (372)
178 1fp2_A Isoflavone O-methyltran 99.1 2.6E-10 8.8E-15 111.3 11.7 133 189-374 188-339 (352)
179 1u2z_A Histone-lysine N-methyl 99.1 2.4E-10 8.2E-15 117.1 11.7 129 171-333 227-358 (433)
180 3cbg_A O-methyltransferase; cy 99.1 5.4E-10 1.9E-14 103.1 12.9 103 189-332 72-180 (232)
181 3tm4_A TRNA (guanine N2-)-meth 99.1 7.7E-10 2.6E-14 109.9 14.5 125 189-375 217-351 (373)
182 1i9g_A Hypothetical protein RV 99.1 1.9E-10 6.5E-15 107.5 9.5 120 169-335 82-204 (280)
183 3b3j_A Histone-arginine methyl 99.1 1.6E-10 5.5E-15 119.3 9.7 100 189-331 158-260 (480)
184 4a6d_A Hydroxyindole O-methylt 99.1 2.8E-09 9.5E-14 104.9 18.2 140 189-375 179-333 (353)
185 1sui_A Caffeoyl-COA O-methyltr 99.1 2.4E-10 8.2E-15 107.2 10.0 112 174-332 70-188 (247)
186 3r3h_A O-methyltransferase, SA 99.1 7.4E-11 2.5E-15 110.4 6.3 103 189-332 60-168 (242)
187 3gnl_A Uncharacterized protein 99.1 1.3E-09 4.3E-14 104.0 14.8 134 175-374 12-147 (244)
188 2wa2_A Non-structural protein 99.1 7.7E-11 2.6E-15 113.4 6.4 100 189-332 82-191 (276)
189 2avd_A Catechol-O-methyltransf 99.1 5.5E-10 1.9E-14 101.2 11.4 104 189-333 69-178 (229)
190 1nv8_A HEMK protein; class I a 99.1 4.2E-10 1.4E-14 108.1 11.2 101 189-332 123-247 (284)
191 2plw_A Ribosomal RNA methyltra 99.1 1.9E-10 6.6E-15 102.0 8.1 48 171-221 7-58 (201)
192 2hnk_A SAM-dependent O-methylt 99.1 2.1E-10 7.3E-15 105.6 8.6 103 189-332 60-179 (239)
193 3adn_A Spermidine synthase; am 99.1 4.2E-10 1.4E-14 109.1 11.0 108 189-332 83-196 (294)
194 1dl5_A Protein-L-isoaspartate 99.1 4.5E-10 1.5E-14 108.6 11.1 113 173-336 62-178 (317)
195 2bm8_A Cephalosporin hydroxyla 99.1 1E-10 3.6E-15 109.0 6.3 123 190-372 82-215 (236)
196 2vdv_E TRNA (guanine-N(7)-)-me 99.1 5.4E-10 1.8E-14 103.7 10.9 112 189-332 49-171 (246)
197 3c3y_A Pfomt, O-methyltransfer 99.1 5.4E-10 1.9E-14 103.7 10.7 113 173-332 60-179 (237)
198 2pbf_A Protein-L-isoaspartate 99.1 2.9E-10 1E-14 103.1 8.2 101 189-332 80-191 (227)
199 1af7_A Chemotaxis receptor met 99.0 2.9E-10 9.9E-15 109.6 8.2 121 189-331 105-249 (274)
200 3dou_A Ribosomal RNA large sub 99.0 5.5E-10 1.9E-14 101.1 9.4 132 173-374 12-162 (191)
201 4azs_A Methyltransferase WBDD; 99.0 3E-10 1E-14 119.0 8.6 101 189-329 66-168 (569)
202 1jg1_A PIMT;, protein-L-isoasp 99.0 1.2E-09 4.1E-14 100.3 10.2 109 173-332 78-187 (235)
203 1ne2_A Hypothetical protein TA 99.0 1.5E-09 5.1E-14 96.7 10.3 113 189-372 51-166 (200)
204 1i1n_A Protein-L-isoaspartate 99.0 5.1E-10 1.7E-14 101.4 7.4 101 189-332 77-180 (226)
205 1uir_A Polyamine aminopropyltr 99.0 1.1E-09 3.9E-14 106.5 10.3 108 189-332 77-193 (314)
206 1xj5_A Spermidine synthase 1; 99.0 1.9E-09 6.6E-14 106.4 12.0 124 170-333 105-234 (334)
207 2qm3_A Predicted methyltransfe 99.0 5.6E-09 1.9E-13 103.5 15.1 127 189-373 172-306 (373)
208 2nyu_A Putative ribosomal RNA 99.0 1E-09 3.6E-14 96.6 8.6 94 189-332 22-143 (196)
209 2b78_A Hypothetical protein SM 99.0 1.6E-09 5.4E-14 108.4 10.6 133 189-374 212-360 (385)
210 1mjf_A Spermidine synthase; sp 99.0 9.5E-10 3.2E-14 105.2 8.4 111 189-332 75-191 (281)
211 3k6r_A Putative transferase PH 99.0 2.7E-09 9.3E-14 103.3 11.6 146 159-373 108-254 (278)
212 1r18_A Protein-L-isoaspartate( 99.0 1.2E-09 4.1E-14 99.6 8.5 104 189-335 84-196 (227)
213 1zg3_A Isoflavanone 4'-O-methy 99.0 2.1E-09 7.2E-14 105.1 10.5 135 189-375 193-346 (358)
214 2i7c_A Spermidine synthase; tr 99.0 2.4E-09 8.2E-14 102.6 10.6 108 189-333 78-191 (283)
215 1zq9_A Probable dimethyladenos 99.0 6.5E-09 2.2E-13 99.7 13.5 112 173-331 15-144 (285)
216 3gjy_A Spermidine synthase; AP 98.9 1.5E-09 5.2E-14 107.0 9.1 103 190-332 90-198 (317)
217 1inl_A Spermidine synthase; be 98.9 2.6E-09 8.7E-14 103.1 10.5 107 189-332 90-203 (296)
218 2o07_A Spermidine synthase; st 98.9 2.2E-09 7.5E-14 104.3 9.9 107 189-332 95-207 (304)
219 1ixk_A Methyltransferase; open 98.9 6.9E-09 2.4E-13 100.8 13.3 130 189-373 118-272 (315)
220 3sso_A Methyltransferase; macr 98.9 2.6E-09 9E-14 108.9 10.7 145 170-368 201-359 (419)
221 2ih2_A Modification methylase 98.9 7.2E-09 2.5E-13 102.5 13.5 130 172-368 25-186 (421)
222 2oxt_A Nucleoside-2'-O-methylt 98.9 9.7E-10 3.3E-14 105.1 6.9 100 189-332 74-183 (265)
223 2b25_A Hypothetical protein; s 98.9 4.2E-09 1.4E-13 102.1 11.0 129 170-335 89-220 (336)
224 2pt6_A Spermidine synthase; tr 98.9 2E-09 7E-14 105.3 8.8 107 189-332 116-228 (321)
225 3a27_A TYW2, uncharacterized p 98.9 2.6E-09 9E-14 101.5 8.8 97 189-332 119-217 (272)
226 2b2c_A Spermidine synthase; be 98.9 3E-09 1E-13 104.1 9.4 107 189-332 108-220 (314)
227 1iy9_A Spermidine synthase; ro 98.9 2.3E-09 7.8E-14 102.5 8.4 107 189-332 75-187 (275)
228 2p41_A Type II methyltransfera 98.9 9.1E-09 3.1E-13 100.2 11.2 109 173-332 70-189 (305)
229 4dmg_A Putative uncharacterize 98.9 6.8E-09 2.3E-13 104.7 10.3 102 189-332 214-324 (393)
230 2h1r_A Dimethyladenosine trans 98.8 1.5E-08 5.2E-13 97.9 11.3 95 189-328 42-153 (299)
231 2cmg_A Spermidine synthase; tr 98.8 6.7E-09 2.3E-13 99.0 8.3 98 189-332 72-169 (262)
232 2as0_A Hypothetical protein PH 98.8 8.3E-09 2.8E-13 102.8 9.1 106 189-332 217-333 (396)
233 1qam_A ERMC' methyltransferase 98.8 3.1E-08 1.1E-12 92.8 11.8 53 173-228 17-69 (244)
234 3giw_A Protein of unknown func 98.8 2.3E-08 7.8E-13 97.1 10.9 172 150-372 43-243 (277)
235 3c0k_A UPF0064 protein YCCW; P 98.8 1.5E-08 5.3E-13 101.0 9.1 107 189-332 220-337 (396)
236 3ajd_A Putative methyltransfer 98.7 1.7E-08 5.9E-13 95.7 8.6 133 189-373 83-238 (274)
237 3v97_A Ribosomal RNA large sub 98.7 1.6E-08 5.5E-13 108.9 9.1 105 189-332 539-655 (703)
238 2okc_A Type I restriction enzy 98.7 4.2E-08 1.4E-12 99.5 11.7 120 172-335 157-308 (445)
239 2yx1_A Hypothetical protein MJ 98.7 2.1E-08 7.2E-13 98.2 8.8 120 189-374 195-315 (336)
240 2f8l_A Hypothetical protein LM 98.7 4.3E-08 1.5E-12 95.8 10.8 125 189-369 130-279 (344)
241 3frh_A 16S rRNA methylase; met 98.7 1.7E-07 5.9E-12 89.8 13.9 152 163-374 85-239 (253)
242 1yub_A Ermam, rRNA methyltrans 98.7 5.1E-09 1.7E-13 97.5 2.8 111 174-332 17-143 (245)
243 1wxx_A TT1595, hypothetical pr 98.7 2.7E-08 9.3E-13 98.9 7.5 104 190-332 210-323 (382)
244 2xyq_A Putative 2'-O-methyl tr 98.7 5.3E-08 1.8E-12 94.8 9.3 111 189-373 63-194 (290)
245 3ldu_A Putative methylase; str 98.6 1.4E-07 4.6E-12 94.7 10.9 108 174-326 183-334 (385)
246 3k0b_A Predicted N6-adenine-sp 98.6 1.9E-07 6.5E-12 94.0 11.5 101 189-331 201-347 (393)
247 2yxl_A PH0851 protein, 450AA l 98.6 4E-07 1.4E-11 92.7 13.9 131 189-372 259-415 (450)
248 3ldg_A Putative uncharacterize 98.6 6.6E-07 2.2E-11 90.0 13.9 101 189-331 194-340 (384)
249 2jjq_A Uncharacterized RNA met 98.5 6.1E-07 2.1E-11 91.2 13.0 94 189-332 290-385 (425)
250 3m4x_A NOL1/NOP2/SUN family pr 98.5 4E-07 1.4E-11 93.8 11.4 130 189-372 105-259 (456)
251 3lcv_B Sisomicin-gentamicin re 98.5 5.6E-07 1.9E-11 87.3 11.7 153 163-374 111-270 (281)
252 1sqg_A SUN protein, FMU protei 98.5 3.4E-07 1.2E-11 92.4 9.9 130 189-372 246-400 (429)
253 3gru_A Dimethyladenosine trans 98.5 6.2E-07 2.1E-11 87.3 11.2 84 174-304 38-121 (295)
254 1uwv_A 23S rRNA (uracil-5-)-me 98.5 8.2E-07 2.8E-11 89.9 12.2 137 189-387 286-426 (433)
255 2frx_A Hypothetical protein YE 98.5 2.4E-07 8.4E-12 95.6 8.4 103 189-332 117-244 (479)
256 3b5i_A S-adenosyl-L-methionine 98.5 4.6E-06 1.6E-10 83.9 17.0 96 278-376 134-298 (374)
257 3m6w_A RRNA methylase; rRNA me 98.4 2.4E-07 8.4E-12 95.6 7.2 101 189-331 101-226 (464)
258 3fut_A Dimethyladenosine trans 98.4 1.3E-06 4.6E-11 83.9 11.8 97 174-319 35-133 (271)
259 2qfm_A Spermine synthase; sper 98.4 6.9E-07 2.4E-11 89.7 8.2 113 189-332 188-312 (364)
260 3bt7_A TRNA (uracil-5-)-methyl 98.4 8.1E-07 2.8E-11 87.9 8.7 149 173-387 201-363 (369)
261 4gqb_A Protein arginine N-meth 98.3 8.9E-07 3.1E-11 94.7 8.7 114 174-331 341-464 (637)
262 2dul_A N(2),N(2)-dimethylguano 98.3 6.5E-07 2.2E-11 89.8 7.0 111 190-331 48-161 (378)
263 3tqs_A Ribosomal RNA small sub 98.3 1.8E-06 6.1E-11 82.1 9.5 52 174-228 17-68 (255)
264 3v97_A Ribosomal RNA large sub 98.3 6.3E-06 2.1E-10 88.8 13.3 104 189-331 190-344 (703)
265 2ar0_A M.ecoki, type I restric 98.2 2.9E-06 9.9E-11 88.7 10.4 124 173-335 156-313 (541)
266 2r6z_A UPF0341 protein in RSP 98.1 1.1E-06 3.7E-11 83.6 4.0 40 189-228 83-129 (258)
267 3khk_A Type I restriction-modi 98.1 5.5E-06 1.9E-10 86.9 9.5 39 191-229 246-301 (544)
268 1qyr_A KSGA, high level kasuga 98.1 8E-06 2.7E-10 77.4 9.3 50 174-228 9-60 (252)
269 3ftd_A Dimethyladenosine trans 98.1 1.5E-05 5E-10 75.3 10.3 52 174-228 19-71 (249)
270 2efj_A 3,7-dimethylxanthine me 98.1 3.2E-05 1.1E-09 78.1 13.1 60 317-376 208-292 (384)
271 3axs_A Probable N(2),N(2)-dime 98.1 4.8E-06 1.7E-10 84.1 7.0 99 189-331 52-155 (392)
272 3ua3_A Protein arginine N-meth 98.0 8.5E-06 2.9E-10 88.1 9.1 116 174-331 396-531 (745)
273 3lkd_A Type I restriction-modi 98.0 2.6E-05 9E-10 81.8 12.0 110 189-335 221-359 (542)
274 3o4f_A Spermidine synthase; am 98.0 2.3E-05 7.7E-10 76.6 10.5 108 189-332 83-196 (294)
275 1m6y_A S-adenosyl-methyltransf 98.0 1.1E-05 3.9E-10 78.5 8.2 40 189-228 26-67 (301)
276 2qy6_A UPF0209 protein YFCK; s 98.0 1.4E-05 4.8E-10 76.2 8.5 145 189-374 60-233 (257)
277 2oyr_A UPF0341 protein YHIQ; a 98.0 4.4E-06 1.5E-10 79.9 5.0 104 191-328 90-194 (258)
278 3s1s_A Restriction endonucleas 98.0 3.3E-05 1.1E-09 84.8 12.2 39 189-227 321-364 (878)
279 1m6e_X S-adenosyl-L-methionnin 98.0 1.8E-05 6.1E-10 79.3 9.3 148 189-374 51-278 (359)
280 2k4m_A TR8_protein, UPF0146 pr 97.9 1.6E-05 5.6E-10 70.8 7.3 46 173-223 24-71 (153)
281 3ll7_A Putative methyltransfer 97.9 1.2E-05 4.1E-10 81.9 6.4 40 190-229 94-133 (410)
282 3uzu_A Ribosomal RNA small sub 97.9 1.7E-05 5.8E-10 76.4 6.6 40 189-228 42-85 (279)
283 2b9e_A NOL1/NOP2/SUN domain fa 97.8 0.00015 5.2E-09 70.6 11.4 40 189-228 102-144 (309)
284 3c6k_A Spermine synthase; sper 97.6 9.6E-05 3.3E-09 74.7 7.6 113 189-332 205-329 (381)
285 3cvo_A Methyltransferase-like 97.6 0.00053 1.8E-08 63.5 11.6 99 189-331 30-151 (202)
286 3evf_A RNA-directed RNA polyme 97.6 0.00043 1.5E-08 67.2 11.4 116 169-332 58-182 (277)
287 2zig_A TTHA0409, putative modi 97.5 0.00013 4.5E-09 69.9 7.2 55 173-231 223-277 (297)
288 2wk1_A NOVP; transferase, O-me 97.4 0.001 3.5E-08 64.4 11.8 158 151-332 70-242 (282)
289 4auk_A Ribosomal RNA large sub 97.4 0.0018 6.3E-08 65.2 13.1 120 189-370 211-334 (375)
290 3ufb_A Type I restriction-modi 97.0 0.0049 1.7E-07 64.2 12.2 40 189-228 217-271 (530)
291 3gcz_A Polyprotein; flavivirus 96.9 0.0021 7.2E-08 62.5 7.8 50 170-223 75-126 (282)
292 1wg8_A Predicted S-adenosylmet 96.8 0.0024 8.1E-08 62.2 7.3 41 189-229 22-62 (285)
293 2px2_A Genome polyprotein [con 96.7 0.0026 9E-08 61.3 7.0 94 188-332 72-181 (269)
294 3eld_A Methyltransferase; flav 96.6 0.0082 2.8E-07 58.8 9.6 73 143-223 43-117 (300)
295 1g60_A Adenine-specific methyl 96.3 0.0077 2.6E-07 56.5 7.3 51 174-228 201-251 (260)
296 2c7p_A Modification methylase 96.1 0.071 2.4E-06 52.1 13.3 40 189-228 10-50 (327)
297 4fzv_A Putative methyltransfer 95.6 0.045 1.6E-06 54.5 9.7 109 188-331 147-281 (359)
298 3r24_A NSP16, 2'-O-methyl tran 95.4 0.043 1.5E-06 54.2 8.4 73 280-374 156-239 (344)
299 3g7u_A Cytosine-specific methy 95.4 0.075 2.5E-06 53.0 10.4 38 191-228 3-41 (376)
300 1rjd_A PPM1P, carboxy methyl t 95.3 0.21 7.1E-06 49.1 13.4 158 189-369 97-281 (334)
301 1pqw_A Polyketide synthase; ro 95.3 0.028 9.7E-07 49.4 6.4 39 188-226 37-78 (198)
302 3vyw_A MNMC2; tRNA wobble urid 95.0 0.011 3.7E-07 58.1 2.9 72 278-374 168-246 (308)
303 1g55_A DNA cytosine methyltran 95.0 0.17 5.7E-06 49.6 11.4 39 190-228 2-43 (343)
304 2dph_A Formaldehyde dismutase; 94.9 0.012 4E-07 58.1 3.0 41 188-228 184-227 (398)
305 1f8f_A Benzyl alcohol dehydrog 94.8 0.032 1.1E-06 54.4 5.9 41 188-228 189-232 (371)
306 3s2e_A Zinc-containing alcohol 94.7 0.019 6.6E-07 55.1 4.0 41 188-228 165-207 (340)
307 3fpc_A NADP-dependent alcohol 94.7 0.034 1.2E-06 53.7 5.5 41 188-228 165-208 (352)
308 4ej6_A Putative zinc-binding d 94.6 0.038 1.3E-06 54.1 5.9 40 189-228 182-224 (370)
309 3m6i_A L-arabinitol 4-dehydrog 94.6 0.037 1.3E-06 53.6 5.7 40 189-228 179-221 (363)
310 3lkz_A Non-structural protein 94.5 0.093 3.2E-06 51.6 8.1 136 143-332 56-202 (321)
311 3ubt_Y Modification methylase 94.4 0.46 1.6E-05 45.3 12.8 38 191-228 1-39 (331)
312 3ip1_A Alcohol dehydrogenase, 94.4 0.095 3.2E-06 51.8 8.2 41 188-228 212-255 (404)
313 3two_A Mannitol dehydrogenase; 94.3 0.095 3.3E-06 50.5 7.8 40 188-227 175-216 (348)
314 1pl8_A Human sorbitol dehydrog 94.3 0.096 3.3E-06 50.7 7.7 40 189-228 171-213 (356)
315 1v3u_A Leukotriene B4 12- hydr 94.2 0.12 4.2E-06 49.2 8.2 40 188-227 144-186 (333)
316 4b7c_A Probable oxidoreductase 94.1 0.04 1.4E-06 52.7 4.6 40 188-227 148-190 (336)
317 2zig_A TTHA0409, putative modi 94.0 0.078 2.7E-06 50.5 6.3 91 277-373 21-133 (297)
318 3gms_A Putative NADPH:quinone 93.9 0.031 1.1E-06 53.8 3.4 41 188-228 143-186 (340)
319 1uuf_A YAHK, zinc-type alcohol 93.9 0.083 2.8E-06 51.7 6.5 41 188-228 193-235 (369)
320 3qwb_A Probable quinone oxidor 93.9 0.032 1.1E-06 53.5 3.4 41 188-228 147-190 (334)
321 3me5_A Cytosine-specific methy 93.8 1.2 4.1E-05 46.0 15.3 54 175-228 70-127 (482)
322 3uko_A Alcohol dehydrogenase c 93.7 0.089 3.1E-06 51.4 6.3 41 188-228 192-235 (378)
323 1e3j_A NADP(H)-dependent ketos 93.6 0.073 2.5E-06 51.4 5.4 40 189-228 168-209 (352)
324 2eih_A Alcohol dehydrogenase; 93.6 0.071 2.4E-06 51.3 5.3 41 188-228 165-208 (343)
325 3p8z_A Mtase, non-structural p 93.4 0.33 1.1E-05 46.5 9.4 97 188-332 77-184 (267)
326 2j3h_A NADP-dependent oxidored 93.4 0.098 3.4E-06 50.1 6.0 39 188-226 154-195 (345)
327 3uog_A Alcohol dehydrogenase; 93.3 0.06 2.1E-06 52.4 4.4 41 188-228 188-230 (363)
328 1kol_A Formaldehyde dehydrogen 93.2 0.044 1.5E-06 53.9 3.2 41 188-228 184-227 (398)
329 3qv2_A 5-cytosine DNA methyltr 93.2 0.37 1.3E-05 47.2 9.7 40 189-228 9-52 (327)
330 3jyn_A Quinone oxidoreductase; 93.2 0.043 1.5E-06 52.4 3.0 41 188-228 139-182 (325)
331 4eye_A Probable oxidoreductase 93.1 0.098 3.4E-06 50.4 5.5 41 188-228 158-201 (342)
332 3goh_A Alcohol dehydrogenase, 93.1 0.22 7.6E-06 47.1 7.9 39 188-227 141-181 (315)
333 1p0f_A NADP-dependent alcohol 93.0 0.3 1E-05 47.4 8.9 41 188-228 190-233 (373)
334 1cdo_A Alcohol dehydrogenase; 92.8 0.31 1.1E-05 47.3 8.6 41 188-228 191-234 (374)
335 2hcy_A Alcohol dehydrogenase 1 92.8 0.065 2.2E-06 51.7 3.6 40 188-227 168-210 (347)
336 1rjw_A ADH-HT, alcohol dehydro 92.6 0.089 3.1E-06 50.6 4.4 39 189-227 164-204 (339)
337 2fzw_A Alcohol dehydrogenase c 92.6 0.21 7.2E-06 48.4 7.1 41 188-228 189-232 (373)
338 3nx4_A Putative oxidoreductase 92.6 0.15 5E-06 48.4 5.8 37 192-228 149-188 (324)
339 2d8a_A PH0655, probable L-thre 92.6 0.073 2.5E-06 51.3 3.7 40 189-228 167-209 (348)
340 2jhf_A Alcohol dehydrogenase E 92.5 0.4 1.4E-05 46.6 8.9 41 188-228 190-233 (374)
341 1yb5_A Quinone oxidoreductase; 92.5 0.13 4.3E-06 50.0 5.3 40 188-227 169-211 (351)
342 1wly_A CAAR, 2-haloacrylate re 92.4 0.11 3.8E-06 49.6 4.7 40 188-227 144-186 (333)
343 2h6e_A ADH-4, D-arabinose 1-de 92.4 0.089 3E-06 50.6 4.0 40 189-228 170-213 (344)
344 1iz0_A Quinone oxidoreductase; 92.2 0.052 1.8E-06 51.2 2.1 39 188-226 124-165 (302)
345 2c0c_A Zinc binding alcohol de 92.1 0.12 4.2E-06 50.2 4.6 39 189-227 163-204 (362)
346 1e3i_A Alcohol dehydrogenase, 92.0 0.43 1.5E-05 46.3 8.5 41 188-228 194-237 (376)
347 1piw_A Hypothetical zinc-type 92.0 0.12 4E-06 50.2 4.4 41 188-228 178-220 (360)
348 1qor_A Quinone oxidoreductase; 92.0 0.12 4.1E-06 49.1 4.4 40 188-227 139-181 (327)
349 2j8z_A Quinone oxidoreductase; 91.9 0.17 5.8E-06 49.0 5.3 40 188-227 161-203 (354)
350 4dup_A Quinone oxidoreductase; 91.8 0.2 6.7E-06 48.5 5.7 41 188-228 166-209 (353)
351 1vj0_A Alcohol dehydrogenase, 91.5 0.071 2.4E-06 52.3 2.2 41 188-228 194-237 (380)
352 1boo_A Protein (N-4 cytosine-s 91.4 0.4 1.4E-05 46.4 7.4 51 174-228 241-291 (323)
353 3krt_A Crotonyl COA reductase; 91.3 0.23 7.8E-06 49.9 5.8 41 188-228 227-270 (456)
354 2dq4_A L-threonine 3-dehydroge 91.3 0.061 2.1E-06 51.8 1.4 36 189-224 164-202 (343)
355 1i4w_A Mitochondrial replicati 91.1 0.4 1.4E-05 47.7 7.2 37 189-225 58-96 (353)
356 4a0s_A Octenoyl-COA reductase/ 91.1 0.3 1E-05 48.7 6.4 41 188-228 219-262 (447)
357 4h0n_A DNMT2; SAH binding, tra 90.9 1.1 3.8E-05 43.8 10.1 39 190-228 3-44 (333)
358 3jv7_A ADH-A; dehydrogenase, n 90.8 0.13 4.3E-06 49.5 3.2 40 189-228 171-213 (345)
359 3c85_A Putative glutathione-re 90.8 1.1 3.8E-05 38.7 9.0 37 189-225 38-77 (183)
360 2zb4_A Prostaglandin reductase 90.7 0.15 5E-06 49.3 3.6 37 189-225 158-200 (357)
361 3gaz_A Alcohol dehydrogenase s 90.5 0.32 1.1E-05 46.8 5.8 39 188-227 149-190 (343)
362 3h2s_A Putative NADH-flavin re 90.5 1.2 4E-05 39.0 9.0 33 192-224 2-37 (224)
363 1xa0_A Putative NADPH dependen 90.2 0.19 6.3E-06 47.8 3.8 35 192-226 152-189 (328)
364 3e8x_A Putative NAD-dependent 89.8 1.1 3.7E-05 40.0 8.3 36 189-224 20-58 (236)
365 3pvc_A TRNA 5-methylaminomethy 89.6 1 3.5E-05 47.6 9.2 74 277-374 149-231 (689)
366 2b5w_A Glucose dehydrogenase; 88.9 0.39 1.4E-05 46.4 5.0 32 191-222 174-210 (357)
367 1tt7_A YHFP; alcohol dehydroge 88.9 0.28 9.5E-06 46.7 3.8 35 192-226 153-190 (330)
368 3gqv_A Enoyl reductase; medium 88.7 0.34 1.2E-05 47.2 4.4 38 188-226 163-203 (371)
369 3oig_A Enoyl-[acyl-carrier-pro 88.4 1.4 4.8E-05 40.1 8.2 36 189-224 6-46 (266)
370 2oo3_A Protein involved in cat 88.2 0.67 2.3E-05 44.9 6.1 109 171-331 80-195 (283)
371 3dqp_A Oxidoreductase YLBE; al 88.0 1.4 4.7E-05 38.8 7.6 29 192-221 2-34 (219)
372 4e21_A 6-phosphogluconate dehy 87.9 2.4 8.2E-05 41.7 10.0 115 190-372 22-138 (358)
373 3k6j_A Protein F01G10.3, confi 87.7 1.2 4.1E-05 45.7 8.0 34 189-222 53-88 (460)
374 1boo_A Protein (N-4 cytosine-s 87.6 1.4 4.9E-05 42.4 8.1 88 278-373 15-117 (323)
375 4dvj_A Putative zinc-dependent 87.6 0.78 2.7E-05 44.6 6.2 40 189-228 171-214 (363)
376 1yqd_A Sinapyl alcohol dehydro 87.3 0.7 2.4E-05 44.9 5.6 37 189-225 187-225 (366)
377 2cdc_A Glucose dehydrogenase g 87.3 0.96 3.3E-05 43.8 6.6 32 190-221 181-214 (366)
378 1eg2_A Modification methylase 87.2 0.98 3.4E-05 43.8 6.6 52 173-228 230-284 (319)
379 3ggo_A Prephenate dehydrogenas 86.8 3.8 0.00013 39.3 10.5 36 190-225 33-72 (314)
380 3g0o_A 3-hydroxyisobutyrate de 86.6 2 6.9E-05 40.5 8.3 36 190-225 7-44 (303)
381 4dll_A 2-hydroxy-3-oxopropiona 86.5 2.9 9.9E-05 39.9 9.5 36 189-224 30-67 (320)
382 3kkj_A Amine oxidase, flavin-c 86.4 0.4 1.4E-05 40.4 3.0 29 192-220 4-34 (336)
383 2vn8_A Reticulon-4-interacting 86.3 0.46 1.6E-05 46.2 3.8 36 188-224 182-220 (375)
384 2vhw_A Alanine dehydrogenase; 85.6 0.53 1.8E-05 46.5 3.9 37 189-225 167-205 (377)
385 4e12_A Diketoreductase; oxidor 85.6 3.2 0.00011 38.8 9.1 37 191-227 5-43 (283)
386 1y1p_A ARII, aldehyde reductas 85.6 9.2 0.00031 35.3 12.2 35 189-223 10-47 (342)
387 3p2y_A Alanine dehydrogenase/p 85.5 0.52 1.8E-05 47.4 3.8 37 189-225 183-221 (381)
388 4a2c_A Galactitol-1-phosphate 85.3 0.71 2.4E-05 43.9 4.4 41 188-228 159-202 (346)
389 2eez_A Alanine dehydrogenase; 85.0 0.81 2.8E-05 44.9 4.8 37 189-225 165-203 (369)
390 1zcj_A Peroxisomal bifunctiona 84.6 6.5 0.00022 39.8 11.5 39 189-227 36-76 (463)
391 1l7d_A Nicotinamide nucleotide 84.5 0.65 2.2E-05 45.9 3.9 37 189-225 171-209 (384)
392 3ew7_A LMO0794 protein; Q8Y8U8 84.3 3.4 0.00011 35.8 8.1 32 192-223 2-36 (221)
393 4dgk_A Phytoene dehydrogenase; 84.2 0.45 1.6E-05 47.3 2.6 31 191-221 2-34 (501)
394 3ce6_A Adenosylhomocysteinase; 84.1 2.8 9.4E-05 43.5 8.5 37 189-225 273-311 (494)
395 3tqh_A Quinone oxidoreductase; 84.0 0.91 3.1E-05 43.0 4.6 37 188-225 151-190 (321)
396 2g76_A 3-PGDH, D-3-phosphoglyc 83.9 1.5 5.1E-05 43.0 6.2 31 189-221 164-198 (335)
397 3fbg_A Putative arginate lyase 83.8 0.92 3.2E-05 43.5 4.5 40 189-228 150-192 (346)
398 3ius_A Uncharacterized conserv 83.7 8.6 0.0003 34.8 10.9 30 191-222 6-39 (286)
399 3qha_A Putative oxidoreductase 83.6 2.4 8.1E-05 40.0 7.3 35 190-224 15-51 (296)
400 4dio_A NAD(P) transhydrogenase 83.4 0.82 2.8E-05 46.3 4.1 38 189-226 189-228 (405)
401 2ekl_A D-3-phosphoglycerate de 82.8 1.2 4E-05 43.1 4.8 32 189-222 141-176 (313)
402 1x13_A NAD(P) transhydrogenase 82.6 0.74 2.5E-05 46.1 3.4 37 189-225 171-209 (401)
403 3slk_A Polyketide synthase ext 82.4 0.29 1E-05 53.3 0.4 35 187-221 343-380 (795)
404 2vz8_A Fatty acid synthase; tr 82.1 0.69 2.4E-05 56.5 3.5 75 295-372 1309-1391(2512)
405 2f1k_A Prephenate dehydrogenas 81.9 9.6 0.00033 34.9 10.5 34 192-225 2-37 (279)
406 3k96_A Glycerol-3-phosphate de 81.9 6.4 0.00022 38.5 9.8 101 190-332 29-131 (356)
407 3qiv_A Short-chain dehydrogena 81.6 22 0.00076 31.7 12.7 37 189-225 8-47 (253)
408 3gpi_A NAD-dependent epimerase 81.3 5.2 0.00018 36.4 8.5 29 190-220 3-35 (286)
409 3o26_A Salutaridine reductase; 81.1 11 0.00036 34.5 10.5 37 189-225 11-50 (311)
410 2g5c_A Prephenate dehydrogenas 80.7 11 0.00037 34.6 10.5 34 192-225 3-40 (281)
411 4eez_A Alcohol dehydrogenase 1 80.7 3.7 0.00013 38.9 7.4 40 189-228 163-205 (348)
412 1wwk_A Phosphoglycerate dehydr 80.2 1.9 6.6E-05 41.4 5.3 32 189-222 141-176 (307)
413 1v8b_A Adenosylhomocysteinase; 79.7 3 0.0001 43.1 6.8 33 189-223 256-292 (479)
414 3d64_A Adenosylhomocysteinase; 79.6 3 0.0001 43.2 6.9 33 189-223 276-312 (494)
415 2h78_A Hibadh, 3-hydroxyisobut 79.3 5.3 0.00018 37.3 7.9 35 191-225 4-40 (302)
416 2bka_A CC3, TAT-interacting pr 79.0 6.6 0.00022 34.6 8.1 32 190-221 18-54 (242)
417 2iid_A L-amino-acid oxidase; f 78.7 2.1 7.3E-05 42.5 5.3 49 170-220 15-65 (498)
418 3tos_A CALS11; methyltransfera 78.6 27 0.00094 32.9 12.7 162 146-331 20-214 (257)
419 4a27_A Synaptic vesicle membra 78.2 1.9 6.4E-05 41.4 4.5 36 188-224 141-180 (349)
420 4hy3_A Phosphoglycerate oxidor 78.1 2.1 7E-05 42.7 4.9 31 189-221 175-209 (365)
421 3gvp_A Adenosylhomocysteinase 77.8 3.6 0.00012 42.1 6.7 36 189-224 219-256 (435)
422 3lyl_A 3-oxoacyl-(acyl-carrier 77.7 32 0.0011 30.5 12.4 37 189-225 4-43 (247)
423 2duw_A Putative COA-binding pr 77.7 8.9 0.0003 32.6 8.2 55 296-373 69-123 (145)
424 3o38_A Short chain dehydrogena 77.6 21 0.00071 32.2 11.2 37 189-225 21-61 (266)
425 3tjr_A Short chain dehydrogena 77.5 24 0.00082 32.9 11.9 37 189-225 30-69 (301)
426 4hb9_A Similarities with proba 77.5 1.5 5.2E-05 41.5 3.6 29 191-219 2-32 (412)
427 3tka_A Ribosomal RNA small sub 77.2 3.7 0.00013 40.9 6.3 40 189-228 57-99 (347)
428 1pjc_A Protein (L-alanine dehy 77.2 2.2 7.5E-05 41.7 4.7 37 189-225 166-204 (361)
429 3d1l_A Putative NADP oxidoredu 77.2 15 0.00052 33.3 10.2 35 190-224 10-47 (266)
430 3llv_A Exopolyphosphatase-rela 77.1 2.8 9.7E-05 34.4 4.8 36 190-225 6-43 (141)
431 3d4o_A Dipicolinate synthase s 77.1 11 0.00039 35.3 9.6 33 189-223 154-190 (293)
432 4e6p_A Probable sorbitol dehyd 76.8 29 0.00099 31.3 12.0 36 189-224 7-45 (259)
433 2g1u_A Hypothetical protein TM 76.4 2.3 7.9E-05 35.8 4.1 35 189-223 18-54 (155)
434 4e5n_A Thermostable phosphite 76.1 2.2 7.5E-05 41.6 4.3 31 189-221 144-178 (330)
435 2rir_A Dipicolinate synthase, 75.7 12 0.0004 35.3 9.3 34 189-224 156-193 (300)
436 4gbj_A 6-phosphogluconate dehy 75.6 12 0.0004 35.6 9.2 112 191-372 6-120 (297)
437 3c24_A Putative oxidoreductase 75.4 12 0.0004 34.7 9.0 34 191-224 12-48 (286)
438 1vpd_A Tartronate semialdehyde 75.3 6.3 0.00021 36.5 7.1 35 191-225 6-42 (299)
439 1gdh_A D-glycerate dehydrogena 75.2 2.8 9.6E-05 40.5 4.9 32 189-222 145-181 (320)
440 2cvz_A Dehydrogenase, 3-hydrox 74.9 8.9 0.00031 35.1 8.0 32 192-224 3-36 (289)
441 4f6c_A AUSA reductase domain p 74.8 19 0.00063 35.0 10.7 33 189-222 68-104 (427)
442 1gu7_A Enoyl-[acyl-carrier-pro 74.7 1.5 5.2E-05 42.1 2.8 33 189-221 166-202 (364)
443 3pef_A 6-phosphogluconate dehy 74.5 4.7 0.00016 37.4 6.1 34 191-224 2-37 (287)
444 3op4_A 3-oxoacyl-[acyl-carrier 74.0 45 0.0015 29.9 12.4 36 189-224 8-46 (248)
445 3ps9_A TRNA 5-methylaminomethy 73.9 8.9 0.00031 40.2 8.7 138 188-372 65-237 (676)
446 3gvc_A Oxidoreductase, probabl 73.9 33 0.0011 31.6 11.8 36 189-224 28-66 (277)
447 3ka7_A Oxidoreductase; structu 73.8 2 6.8E-05 41.4 3.4 29 192-220 2-32 (425)
448 3ucx_A Short chain dehydrogena 73.7 51 0.0018 29.7 12.9 37 189-225 10-49 (264)
449 1mv8_A GMD, GDP-mannose 6-dehy 73.4 13 0.00044 37.1 9.3 34 192-225 2-37 (436)
450 3n58_A Adenosylhomocysteinase; 73.2 5.5 0.00019 41.1 6.6 49 173-223 232-282 (464)
451 3imf_A Short chain dehydrogena 73.0 46 0.0016 30.0 12.3 37 189-225 5-44 (257)
452 3pi7_A NADH oxidoreductase; gr 72.8 1.4 4.8E-05 42.2 2.0 37 191-227 166-205 (349)
453 3r1i_A Short-chain type dehydr 72.7 38 0.0013 31.1 11.9 36 189-224 31-69 (276)
454 3sju_A Keto reductase; short-c 72.6 38 0.0013 31.1 11.8 37 189-225 23-62 (279)
455 3uf0_A Short-chain dehydrogena 72.4 39 0.0013 31.0 11.8 33 189-221 30-65 (273)
456 3nrn_A Uncharacterized protein 72.2 2.3 7.9E-05 41.3 3.4 29 192-220 2-32 (421)
457 3rp8_A Flavoprotein monooxygen 72.2 2.5 8.6E-05 40.8 3.7 33 189-221 22-56 (407)
458 4ezb_A Uncharacterized conserv 72.1 13 0.00044 35.5 8.6 31 191-221 25-58 (317)
459 3fwz_A Inner membrane protein 72.1 4.5 0.00015 33.5 4.8 37 189-225 6-44 (140)
460 2y0c_A BCEC, UDP-glucose dehyd 72.1 13 0.00045 37.8 9.2 37 189-225 7-45 (478)
461 4dkj_A Cytosine-specific methy 71.9 30 0.001 34.6 11.6 40 189-228 9-55 (403)
462 2ew2_A 2-dehydropantoate 2-red 71.8 27 0.00092 31.9 10.6 35 191-225 4-40 (316)
463 4a7p_A UDP-glucose dehydrogena 71.7 8.5 0.00029 39.1 7.6 37 189-225 7-45 (446)
464 3n74_A 3-ketoacyl-(acyl-carrie 71.6 45 0.0015 29.8 11.8 37 189-225 8-47 (261)
465 3i4f_A 3-oxoacyl-[acyl-carrier 71.5 30 0.001 31.0 10.6 33 189-221 6-41 (264)
466 3gg2_A Sugar dehydrogenase, UD 71.4 13 0.00045 37.5 8.9 35 191-225 3-39 (450)
467 1jvb_A NAD(H)-dependent alcoho 71.0 4.7 0.00016 38.5 5.2 41 188-228 169-213 (347)
468 3oz2_A Digeranylgeranylglycero 70.2 2.4 8.2E-05 39.7 3.0 29 192-220 6-36 (397)
469 4iin_A 3-ketoacyl-acyl carrier 70.1 44 0.0015 30.2 11.6 32 189-220 28-62 (271)
470 4ibo_A Gluconate dehydrogenase 70.0 45 0.0015 30.5 11.7 37 189-225 25-64 (271)
471 4egf_A L-xylulose reductase; s 70.0 52 0.0018 29.8 12.0 37 189-225 19-58 (266)
472 2eja_A URO-D, UPD, uroporphyri 69.8 13 0.00044 35.6 8.1 47 172-225 220-266 (338)
473 3rkr_A Short chain oxidoreduct 69.4 45 0.0015 30.0 11.4 37 189-225 28-67 (262)
474 3gg9_A D-3-phosphoglycerate de 69.2 3.6 0.00012 40.5 4.1 31 189-221 159-193 (352)
475 2p4q_A 6-phosphogluconate dehy 69.2 14 0.00048 37.9 8.7 121 190-372 10-132 (497)
476 2gcg_A Glyoxylate reductase/hy 69.1 5.4 0.00018 38.5 5.3 31 189-221 154-188 (330)
477 3tri_A Pyrroline-5-carboxylate 69.0 18 0.00062 33.8 8.8 35 190-224 3-42 (280)
478 3pk0_A Short-chain dehydrogena 68.7 50 0.0017 29.9 11.5 37 189-225 9-48 (262)
479 2dbq_A Glyoxylate reductase; D 68.5 4.6 0.00016 39.1 4.7 33 189-223 149-185 (334)
480 3ond_A Adenosylhomocysteinase; 68.5 11 0.00036 39.2 7.6 51 173-225 250-302 (488)
481 3swr_A DNA (cytosine-5)-methyl 68.5 32 0.0011 38.7 11.9 41 188-228 538-580 (1002)
482 3dfz_A SIRC, precorrin-2 dehyd 68.5 12 0.00041 34.6 7.3 40 180-219 21-62 (223)
483 3obb_A Probable 3-hydroxyisobu 67.9 26 0.0009 33.3 9.8 34 191-224 4-39 (300)
484 3abi_A Putative uncharacterize 67.8 4.9 0.00017 38.9 4.7 37 189-225 15-52 (365)
485 2vz8_A Fatty acid synthase; tr 67.6 5.7 0.00019 48.7 6.1 38 188-225 1666-1706(2512)
486 3dme_A Conserved exported prot 67.5 3.2 0.00011 38.6 3.1 30 191-220 5-36 (369)
487 3ged_A Short-chain dehydrogena 67.4 69 0.0023 29.6 12.3 34 191-224 3-39 (247)
488 3gvx_A Glycerate dehydrogenase 67.2 1.4 4.9E-05 42.4 0.7 33 189-221 121-155 (290)
489 3pgx_A Carveol dehydrogenase; 67.1 62 0.0021 29.4 11.9 32 189-220 14-48 (280)
490 2bcg_G Secretory pathway GDP d 67.0 3 0.0001 41.5 3.0 31 190-220 11-43 (453)
491 4gde_A UDP-galactopyranose mut 66.8 2.9 9.9E-05 41.3 2.8 31 190-220 10-43 (513)
492 3pid_A UDP-glucose 6-dehydroge 66.8 22 0.00076 36.0 9.4 37 189-226 35-73 (432)
493 3grk_A Enoyl-(acyl-carrier-pro 66.5 80 0.0027 29.1 12.7 35 189-223 30-69 (293)
494 3k7m_X 6-hydroxy-L-nicotine ox 65.7 3.4 0.00012 39.9 3.1 28 192-219 3-32 (431)
495 3gaf_A 7-alpha-hydroxysteroid 65.7 76 0.0026 28.5 13.0 37 189-225 11-50 (256)
496 2zyd_A 6-phosphogluconate dehy 65.7 23 0.00078 36.1 9.4 37 189-225 14-52 (480)
497 3r6d_A NAD-dependent epimerase 65.7 7.3 0.00025 34.0 5.0 31 192-222 7-41 (221)
498 1dxy_A D-2-hydroxyisocaproate 65.7 2.3 7.7E-05 41.5 1.8 31 189-221 144-178 (333)
499 3dhn_A NAD-dependent epimerase 65.6 9.1 0.00031 33.3 5.6 31 191-221 5-38 (227)
500 2qrv_A DNA (cytosine-5)-methyl 65.6 8 0.00027 37.1 5.6 41 188-228 14-57 (295)
No 1
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.75 E-value=6e-18 Score=153.63 Aligned_cols=162 Identities=17% Similarity=0.129 Sum_probs=104.4
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+.+++...-. .++.+|||+|||+|+++..||++|+.|+|+|+|..|+..|+-... .. .. ....
T Consensus 10 ~l~~~~~~l~~----~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~---~~--~~----~~~~--- 73 (203)
T 1pjz_A 10 DLQQYWSSLNV----VPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERG---EQ--PH----ITSQ--- 73 (203)
T ss_dssp HHHHHHHHHCC----CTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHC---SC--SE----EEEE---
T ss_pred HHHHHHHhccc----CCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHcc---CC--cc----cccc---
Confidence 34455554321 256799999999999999999999999999999999987762211 00 00 0000
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCC-CCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQV-GAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~-~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~ 329 (397)
.+ .... ...++.++++|+.++.. .+ ++||+|++...+. +..+...+++.++++|||||+
T Consensus 74 ---~~-~~~~-----------~~~~v~~~~~d~~~l~~---~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 74 ---GD-FKVY-----------AAPGIEIWCGDFFALTA---RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp ---TT-EEEE-----------ECSSSEEEEECCSSSTH---HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred ---cc-cccc-----------cCCccEEEECccccCCc---ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 00 0000 01247889999988632 22 6899999754332 234577899999999999998
Q ss_pred EEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 330 WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 330 wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
++-+. +.|.... .+++ .+.++.+|+++++.+ ||+++..+
T Consensus 136 ~~l~~-~~~~~~~-~~~~---~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 136 GLLIT-LEYDQAL-LEGP---PFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp EEEEE-ESSCSSS-SSSC---CCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred EEEEE-EecCccc-cCCC---CCCCCHHHHHHHhcC-CcEEEEec
Confidence 33211 1121111 1112 355899999999998 99988754
No 2
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.73 E-value=1.3e-16 Score=145.31 Aligned_cols=153 Identities=18% Similarity=0.230 Sum_probs=114.7
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
..+++.|.+.++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 41 ~~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-------------------- 95 (242)
T 3l8d_A 41 STIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG-------------------- 95 (242)
T ss_dssp TTHHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--------------------
T ss_pred HHHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--------------------
Confidence 357888888775 4679999999999999999999999999999999997665110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
...++.++.+|+.++- ...++||+|++...+...++...+++.++++|||||++|
T Consensus 96 ----------------------~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 150 (242)
T 3l8d_A 96 ----------------------EGPDLSFIKGDLSSLP---FENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYAC 150 (242)
T ss_dssp ----------------------CBTTEEEEECBTTBCS---SCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------ccCCceEEEcchhcCC---CCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEE
Confidence 0123778899988752 236899999998877766788899999999999999998
Q ss_pred Ee--cCCcch----hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 332 NL--GPLLYH----FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 332 N~--GPLlYh----~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
-. +|.... +....+ .......++.++++++++++||++++...
T Consensus 151 i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 151 IAILGPTAKPRENSYPRLYG-KDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp EEEECTTCGGGGGGGGGGGT-CCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEcCCcchhhhhhhhhhcc-ccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 53 222111 111111 11112348999999999999999998653
No 3
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.73 E-value=4.4e-17 Score=148.99 Aligned_cols=154 Identities=16% Similarity=0.160 Sum_probs=110.9
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCC
Q 015966 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p 269 (397)
+.+|||+|||+|+++..|++.|+.|+|+|+|..|+..++-.+...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------------- 111 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSS----------------------------------- 111 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTS-----------------------------------
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhcc-----------------------------------
Confidence 459999999999999999999999999999999998776322100
Q ss_pred CCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 270 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 270 ~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
....++.++.+|+.++.. .++||+|++...+... .+...+++.++++|||||++|-... ...+..++
T Consensus 112 ---~~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~- 180 (235)
T 3lcc_A 112 ---PKAEYFSFVKEDVFTWRP----TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY---PITDHVGG- 180 (235)
T ss_dssp ---GGGGGEEEECCCTTTCCC----SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC---CCSCCCSC-
T ss_pred ---CCCcceEEEECchhcCCC----CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe---cccccCCC-
Confidence 001237889999988532 4689999988765543 3788999999999999999995321 11111111
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEeec--CCCCCCCcccccccc
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEKEKTI--ETTYTTNPRSMMQVS 391 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~e~~i--~~~Y~~d~~sm~~~~ 391 (397)
..+.++.+++.+++++.||+++..+.. ....-...+.|....
T Consensus 181 --~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~ 224 (235)
T 3lcc_A 181 --PPYKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGKEKLGRWK 224 (235)
T ss_dssp --SSCCCCHHHHHHHHGGGTEEEEEEEECTTCCTTTTTSCEEEEEE
T ss_pred --CCccCCHHHHHHHHHHcCCeEEEEEecCCccccccCHHHHhhhh
Confidence 135689999999999999999985533 233334445554443
No 4
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.72 E-value=8.5e-17 Score=152.44 Aligned_cols=156 Identities=13% Similarity=0.085 Sum_probs=100.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..||++|+.|+|+|+|..|+..|+-.... .+++-. + .+......-.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~-----~~~~~~-~----------~~~~~~~~~~-- 129 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNL-----SYTEEP-L----------AEIAGAKVFK-- 129 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTC-----CEEEEE-C----------TTSTTCEEEE--
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhccc-----cccccc-c----------cccccccccc--
Confidence 567999999999999999999999999999999999876521100 000000 0 0000000000
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~ 346 (397)
....++.++++|+.++.. ...++||+|+....+. ..++...|++.++++|||||+++-+. +.|.... .++
T Consensus 130 ----~~~~~i~~~~~D~~~l~~--~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~-~~~~~~~-~~g 201 (252)
T 2gb4_A 130 ----SSSGSISLYCCSIFDLPR--ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV-LSYDPTK-HAG 201 (252)
T ss_dssp ----ETTSSEEEEESCTTTGGG--GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE-EECCTTS-CCC
T ss_pred ----cCCCceEEEECccccCCc--ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE-EecCCcc-CCC
Confidence 001248899999988642 1137899999754332 23457789999999999999985211 0121111 111
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 347 EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 347 ~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+ .+.++.+||.+++.. +|+++..+
T Consensus 202 ~---~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 202 P---PFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp S---SCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred C---CCCCCHHHHHHHhhC-CeEEEEEe
Confidence 2 345899999999987 69998854
No 5
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.71 E-value=9.9e-17 Score=144.10 Aligned_cols=158 Identities=17% Similarity=0.100 Sum_probs=110.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
.+..+...++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 33 ~~~~~~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---------------------- 85 (211)
T 3e23_A 33 TLTKFLGELP-----AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL---------------------- 85 (211)
T ss_dssp HHHHHHTTSC-----TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------------
T ss_pred HHHHHHHhcC-----CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----------------------
Confidence 4444444443 4679999999999999999999999999999999997665211
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC--hhhHHHHHHHHHHhccCCcEEE
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni~~yi~~I~~~LKPGG~wI 331 (397)
++.+..+|+.++- ..++||+|++...+.. ..++..+++.++++|||||++|
T Consensus 86 -----------------------~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 138 (211)
T 3e23_A 86 -----------------------GRPVRTMLFHQLD----AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFY 138 (211)
T ss_dssp -----------------------TSCCEECCGGGCC----CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -----------------------CCceEEeeeccCC----CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEE
Confidence 0345667877653 3589999998764433 3478899999999999999999
Q ss_pred EecCCcchhhhccCCCCCccccCCHHHHHHHHHhCC-CEEEEEe-ecCCCCCCCcccc
Q 015966 332 NLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG-FEFEKEK-TIETTYTTNPRSM 387 (397)
Q Consensus 332 N~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~G-Feii~e~-~i~~~Y~~d~~sm 387 (397)
-.-|...... ..........++.++++++++++| |+++... .....|....+.+
T Consensus 139 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~~w 194 (211)
T 3e23_A 139 ASYKSGEGEG--RDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELAQF 194 (211)
T ss_dssp EEEECCSSCE--ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEEEE
T ss_pred EEEcCCCccc--ccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCceE
Confidence 5322111000 000111123479999999999999 9999854 4445566554433
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=2.1e-16 Score=140.81 Aligned_cols=138 Identities=12% Similarity=0.144 Sum_probs=102.2
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCC
Q 015966 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p 269 (397)
+.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-. .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---------------------------------~----- 83 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT---------------------------------H----- 83 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH---------------------------------C-----
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---------------------------------C-----
Confidence 56899999999999999999999999999999999766511 0
Q ss_pred CCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 270 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 270 ~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
.++.++.+|+.++. ...++||+|++...+... .++..+++.++++|||||++|-.-+..-.... ....
T Consensus 84 ------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-~~~~ 153 (203)
T 3h2b_A 84 ------PSVTFHHGTITDLS---DSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEP-MYHP 153 (203)
T ss_dssp ------TTSEEECCCGGGGG---GSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE-ECCS
T ss_pred ------CCCeEEeCcccccc---cCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh-hhch
Confidence 02577889988753 235899999987655433 47889999999999999999952211100000 0111
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
......++.+++++++++.||++++...
T Consensus 154 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 154 VATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp SSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 1123458999999999999999998653
No 7
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.70 E-value=5.1e-17 Score=152.12 Aligned_cols=148 Identities=14% Similarity=0.081 Sum_probs=104.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|+++..+++.|. .|+|+|+|..|+..++-.+...
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 110 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNM--------------------------------- 110 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS---------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc---------------------------------
Confidence 567999999999999999999998 8999999999998776322110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeecc----CChhhHHHHHHHHHHhccCCcEEEEecCCc------
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRILKDGGVWINLGPLL------ 337 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFI----Dta~Ni~~yi~~I~~~LKPGG~wIN~GPLl------ 337 (397)
....++.++.+|+.++.. ...++||+|++.+.+ ....++..+++.++++|||||++|-..|..
T Consensus 111 -----~~~~~v~~~~~d~~~~~~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 183 (298)
T 1ri5_A 111 -----KRRFKVFFRAQDSYGRHM--DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILER 183 (298)
T ss_dssp -----CCSSEEEEEESCTTTSCC--CCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH
T ss_pred -----CCCccEEEEECCcccccc--CCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 001236788899877521 135789999988654 557788999999999999999999432221
Q ss_pred ----------chhhhc--------cC----------CCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 338 ----------YHFADL--------YG----------QEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 338 ----------Yh~~d~--------~g----------~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
|...-. .| .......-++.++++++++++||++++....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 184 YKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp HHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred HccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 110000 00 0000012468999999999999999986543
No 8
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.70 E-value=4.6e-16 Score=139.10 Aligned_cols=177 Identities=14% Similarity=0.137 Sum_probs=115.7
Q ss_pred hHHHHHHHHHHhcccccC----hhHHh-hchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCC
Q 015966 146 DKVRCIIRNIVRDWAAEG----KTERD-QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFS 220 (397)
Q Consensus 146 dkv~stL~q~~RDWS~eG----~~ER~-~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S 220 (397)
++++....+.+..|.... ...|. .....+++.+... ++.+|||+|||+|+++..|+++|..|+|+|+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s 83 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILGR-------QPERVLDLGCGEGWLLRALADRGIEAVGVDGD 83 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHHT-------CCSEEEEETCTTCHHHHHHHTTTCEEEEEESC
T ss_pred HHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhcC-------CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCC
Confidence 455555566666665421 11111 1122344444432 45799999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCC-CCCCCcc
Q 015966 221 YYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP-SQVGAWD 299 (397)
Q Consensus 221 ~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~-~~~~~fD 299 (397)
..|+..++-. .+..+..+|+.++...+ ...++||
T Consensus 84 ~~~~~~a~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 84 RTLVDAARAA---------------------------------------------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHHHHHT---------------------------------------------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHHHHHHHHh---------------------------------------------cccccchhhHHhhcccccccCCCcc
Confidence 9999766511 01345666766652111 1235699
Q ss_pred EEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhc----------c-C---C-CCCccccCCHHHHHHHHH
Q 015966 300 AVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADL----------Y-G---Q-EDEMSIELSLEDVKRVAL 364 (397)
Q Consensus 300 ~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~----------~-g---~-~~~~~ieLS~EEl~~ll~ 364 (397)
+|++.+.+. ..+...+++.++++|||||++|-..|..+..... + + . .+.....+|.++++++++
T Consensus 119 ~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (227)
T 3e8s_A 119 LICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALD 197 (227)
T ss_dssp EEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHH
T ss_pred EEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHH
Confidence 999987776 6778899999999999999999633321111100 0 0 0 011123469999999999
Q ss_pred hCCCEEEEEee
Q 015966 365 HYGFEFEKEKT 375 (397)
Q Consensus 365 ~~GFeii~e~~ 375 (397)
++||++++...
T Consensus 198 ~aGf~~~~~~~ 208 (227)
T 3e8s_A 198 MAGLRLVSLQE 208 (227)
T ss_dssp HTTEEEEEEEC
T ss_pred HcCCeEEEEec
Confidence 99999998543
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.70 E-value=9.3e-17 Score=145.36 Aligned_cols=152 Identities=15% Similarity=0.154 Sum_probs=110.9
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.+..+++.|.... ++.+|||+|||+|+++..|+++|.+|+|+|+|..|+..++-..
T Consensus 29 ~~~~~~~~l~~~~------~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------ 84 (250)
T 2p7i_A 29 MHPFMVRAFTPFF------RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRL------------------ 84 (250)
T ss_dssp HHHHHHHHHGGGC------CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHS------------------
T ss_pred HHHHHHHHHHhhc------CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhh------------------
Confidence 3455666665543 3568999999999999999999999999999999997665110
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHH-HhccCCc
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIIS-RILKDGG 328 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~-~~LKPGG 328 (397)
+ .++.++.+|+.++. .+++||+|++...+...++....|+.++ ++|||||
T Consensus 85 ---------------~----------~~v~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG 135 (250)
T 2p7i_A 85 ---------------K----------DGITYIHSRFEDAQ----LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGG 135 (250)
T ss_dssp ---------------C----------SCEEEEESCGGGCC----CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEE
T ss_pred ---------------h----------CCeEEEEccHHHcC----cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCC
Confidence 0 02678889988763 2578999999877666667789999999 9999999
Q ss_pred EEEEecCCcchhhhc----cCC------------CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 329 VWINLGPLLYHFADL----YGQ------------EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 329 ~wIN~GPLlYh~~d~----~g~------------~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+++-..|........ .+. .......++.++++++++++||++++..
T Consensus 136 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 136 RLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp EEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 999644432111000 000 0011234799999999999999999865
No 10
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=2.8e-16 Score=147.91 Aligned_cols=155 Identities=13% Similarity=0.124 Sum_probs=110.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+...
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~---------------------------------- 113 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAK---------------------------------- 113 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-----------------------------------
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------------------------
Confidence 3579999999999999999999999999999999998776332110
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCc-----------
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL----------- 337 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLl----------- 337 (397)
....++.++.+|+.++.. ...++||+|++...+...++...+++.++++|||||++|-..+..
T Consensus 114 ----~~~~~v~~~~~d~~~~~~--~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 187 (285)
T 4htf_A 114 ----GVSDNMQFIHCAAQDVAS--HLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAG 187 (285)
T ss_dssp ----CCGGGEEEEESCGGGTGG--GCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTT
T ss_pred ----CCCcceEEEEcCHHHhhh--hcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhc
Confidence 011247889999987642 235899999998766666677899999999999999999532210
Q ss_pred -chh--hhccC---CCCCccccCCHHHHHHHHHhCCCEEEEEeecC--CCCCCC
Q 015966 338 -YHF--ADLYG---QEDEMSIELSLEDVKRVALHYGFEFEKEKTIE--TTYTTN 383 (397)
Q Consensus 338 -Yh~--~d~~g---~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i~--~~Y~~d 383 (397)
|.+ ..... ........++.++++++++++||++++...+. ..|..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~~~~~~~~~ 241 (285)
T 4htf_A 188 NFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVRVFHDYLRE 241 (285)
T ss_dssp CHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEESSSGGGCSS
T ss_pred CHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEEEeeecccc
Confidence 000 00000 01111235799999999999999999876443 344443
No 11
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.68 E-value=5.8e-16 Score=137.87 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=101.3
Q ss_pred eEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCC
Q 015966 192 ACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPAS 271 (397)
Q Consensus 192 rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~ 271 (397)
+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------------- 74 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEK------------------------------------- 74 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHH-------------------------------------
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------------
Confidence 9999999999999999999999999999999998776322100
Q ss_pred CCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCcc
Q 015966 272 AGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMS 351 (397)
Q Consensus 272 ~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ 351 (397)
+.++.+..+|+.++. ...++||+|++.+..-...+...+++.+.++|||||++|-..+.........+.+....
T Consensus 75 ---~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~ 148 (202)
T 2kw5_A 75 ---GVKITTVQSNLADFD---IVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLD 148 (202)
T ss_dssp ---TCCEEEECCBTTTBS---CCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGG
T ss_pred ---CCceEEEEcChhhcC---CCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcce
Confidence 002677888887752 23578999998765445677889999999999999999953322111110011122224
Q ss_pred ccCCHHHHHHHHHhCCCEEEEEe
Q 015966 352 IELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 352 ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
..++.++++++++ ||+++...
T Consensus 149 ~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 149 LLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp GCCCHHHHHHHCS--SSCEEEEE
T ss_pred eecCHHHHHHHhc--CceEEEEE
Confidence 5689999999998 99998843
No 12
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.68 E-value=4.1e-16 Score=139.22 Aligned_cols=139 Identities=14% Similarity=0.094 Sum_probs=99.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++- + .
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~--~----------------------------~------- 88 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR--H----------------------------G------- 88 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG--G----------------------------C-------
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh--c----------------------------C-------
Confidence 45699999999999999999999999999999999976651 0 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhh--HHHHHHHHHHhccCCcEEEEec--CCc-ch---h
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLG--PLL-YH---F 340 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yi~~I~~~LKPGG~wIN~G--PLl-Yh---~ 340 (397)
..++.++.+|+.++. ..++||+|++...+...++ +..+++.++++|||||+++-.. +.. +. +
T Consensus 89 ------~~~~~~~~~d~~~~~----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 158 (218)
T 3ou2_A 89 ------LDNVEFRQQDLFDWT----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQD 158 (218)
T ss_dssp ------CTTEEEEECCTTSCC----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------
T ss_pred ------CCCeEEEecccccCC----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhh
Confidence 012678899998762 2589999998865543333 6899999999999999998532 210 00 0
Q ss_pred hhc----cC--CCCCccc-----cCCHHHHHHHHHhCCCEEEEEe
Q 015966 341 ADL----YG--QEDEMSI-----ELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 341 ~d~----~g--~~~~~~i-----eLS~EEl~~ll~~~GFeii~e~ 374 (397)
... .. ......+ .++.+++.++++++||+++..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 159 DSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp -----CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeee
Confidence 000 00 0000111 3699999999999999977654
No 13
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.68 E-value=5.9e-16 Score=142.72 Aligned_cols=152 Identities=14% Similarity=0.208 Sum_probs=108.5
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
...|.+.++. .++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++-.+.
T Consensus 33 ~~~l~~~~~~---~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------------------- 88 (253)
T 3g5l_A 33 WHELKKMLPD---FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--------------------- 88 (253)
T ss_dssp HHHHHTTCCC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---------------------
T ss_pred HHHHHHhhhc---cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---------------------
Confidence 3445555553 2678999999999999999999999 99999999999987652110
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~ 333 (397)
..++.++.+|+.++- ...++||+|++...+....++..+++.++++|||||++|-.
T Consensus 89 ---------------------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 89 ---------------------SPVVCYEQKAIEDIA---IEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ---------------------CTTEEEEECCGGGCC---CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCeEEEEcchhhCC---CCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 013678899987752 23589999999876655567889999999999999999953
Q ss_pred --cCCc-------chhhhc-----------cCCC---------CCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 334 --GPLL-------YHFADL-----------YGQE---------DEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 334 --GPLl-------Yh~~d~-----------~g~~---------~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.|.. |.+... +... ....+..|.++++++++++||++++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 145 VEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp EECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEE
T ss_pred eCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeee
Confidence 2211 111100 0000 001122399999999999999998854
No 14
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.68 E-value=5.4e-16 Score=147.64 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=99.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCcccccc
Q 015966 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 264 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~i 264 (397)
++.+|||+|||+|+++..||++ |++|+|+|+|..||..|+-.+...
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~------------------------------ 119 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY------------------------------ 119 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS------------------------------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh------------------------------
Confidence 6779999999999999999986 779999999999998877322110
Q ss_pred CCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCc-----
Q 015966 265 PDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLL----- 337 (397)
Q Consensus 265 PDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLl----- 337 (397)
....++.++.||+.++- .+.||+|++.+.+. ...+...+|+.|+++|||||++|..-+..
T Consensus 120 --------~~~~~v~~~~~D~~~~~-----~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~ 186 (261)
T 4gek_A 120 --------KAPTPVDVIEGDIRDIA-----IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAK 186 (261)
T ss_dssp --------CCSSCEEEEESCTTTCC-----CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHH
T ss_pred --------ccCceEEEeeccccccc-----ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHH
Confidence 01124789999998862 25699999876332 23456789999999999999999532211
Q ss_pred --------ch-hhhccCCCC-C----------ccccCCHHHHHHHHHhCCCEEEEE
Q 015966 338 --------YH-FADLYGQED-E----------MSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 338 --------Yh-~~d~~g~~~-~----------~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
|+ |....|..+ + ....+|.++++++|+++||+.++.
T Consensus 187 ~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 187 VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEE
Confidence 11 110011000 0 012368999999999999987764
No 15
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.68 E-value=4.5e-16 Score=143.01 Aligned_cols=151 Identities=17% Similarity=0.167 Sum_probs=106.7
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+.+.+.+.++.. .++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-
T Consensus 27 ~~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~----------------------- 81 (240)
T 3dli_A 27 LVKARLRRYIPYF--KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEG----------------------- 81 (240)
T ss_dssp HHHHHHGGGGGGT--TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHhhh--cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHh-----------------------
Confidence 3555555544432 256799999999999999999999999999999999875541
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~w 330 (397)
++.++.+|+.+... +..+++||+|++...+... +++..+++.++++|||||++
T Consensus 82 ------------------------~~~~~~~d~~~~~~-~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 136 (240)
T 3dli_A 82 ------------------------KFNVVKSDAIEYLK-SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYI 136 (240)
T ss_dssp ------------------------TSEEECSCHHHHHH-TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCE
T ss_pred ------------------------hcceeeccHHHHhh-hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEE
Confidence 03446677766421 1235899999988655433 36789999999999999999
Q ss_pred EEecCCcch---hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 331 INLGPLLYH---FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 331 IN~GPLlYh---~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
|-..|.... +...+ ..+.....++.+++.++++++||+++...
T Consensus 137 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 137 VIESPNPTSLYSLINFY-IDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp EEEEECTTSHHHHHHHT-TSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred EEEeCCcchhHHHHHHh-cCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 953332111 11111 11222345899999999999999998855
No 16
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.67 E-value=2.8e-16 Score=144.71 Aligned_cols=182 Identities=14% Similarity=0.194 Sum_probs=111.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|+++..+++.|+ .|+|+|+|..|+..++-.+.... ..+..-|+....++........ ++.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~ 128 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEP--GAFDWSPVVTYVCDLEGNRMKG-----PEK 128 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCT--TCCCCHHHHHHHHHHTTTCSCH-----HHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCC--ccccchhhhhhhhcccccccch-----HHH
Confidence 567999999999999999999999 99999999999987764332110 0000000000000000000000 000
Q ss_pred CCCCCCCCCcc-eeEecccccccCC-CCCCCCccEEEEeeccC----ChhhHHHHHHHHHHhccCCcEEEEecCCcchhh
Q 015966 268 HPASAGITEGF-SMCGGDFVEVYSD-PSQVGAWDAVVTCFFID----TAHNIVEYIEIISRILKDGGVWINLGPLLYHFA 341 (397)
Q Consensus 268 ~p~~~~~~~~l-s~~~GDF~ely~~-~~~~~~fD~VvT~FFID----ta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~ 341 (397)
. .....++ .+..+|+.+.... +...++||+|++.+.+. ...++...|+.++++|||||++|-..++--.+.
T Consensus 129 ~---~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~ 205 (265)
T 2i62_A 129 E---EKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY 205 (265)
T ss_dssp H---HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE
T ss_pred H---HHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE
Confidence 0 0000125 7788888774321 11227899999987766 667889999999999999999996443321111
Q ss_pred hccCCCCCccccCCHHHHHHHHHhCCCEEEEEeecCCCCC
Q 015966 342 DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYT 381 (397)
Q Consensus 342 d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i~~~Y~ 381 (397)
.. +........++.+++.++++++||++++.......|.
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 244 (265)
T 2i62_A 206 MI-GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYS 244 (265)
T ss_dssp EE-TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCC
T ss_pred Ec-CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCC
Confidence 11 1010013457999999999999999998765544443
No 17
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.66 E-value=2.8e-16 Score=147.80 Aligned_cols=192 Identities=16% Similarity=0.127 Sum_probs=113.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
..++..+.+.+... ..++.+|||+|||+|.++..+++.|+ .|+|+|+|..|+..|+--++.. +..+..-|.+...+
T Consensus 39 ~~~~~~~~~~~~~~-~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~--~~~~d~s~~~~~~~ 115 (263)
T 2a14_A 39 KFNLECLHKTFGPG-GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKE--PGAYDWTPAVKFAC 115 (263)
T ss_dssp HHHHHHHHHHHSTT-SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTC--TTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcC--CCcccchHHHHHHH
Confidence 34556666665321 23677999999999999999999998 5999999999999877433211 01111111110000
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcce-eEecccccccCC-CCCCCCccEEEEeeccCC----hhhHHHHHHHHHHhc
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFS-MCGGDFVEVYSD-PSQVGAWDAVVTCFFIDT----AHNIVEYIEIISRIL 324 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls-~~~GDF~ely~~-~~~~~~fD~VvT~FFIDt----a~Ni~~yi~~I~~~L 324 (397)
+...... .+++.. .....++. ++.+|+.+.... +...++||+|++.+.+.. .++....++.|+++|
T Consensus 116 ~~~~~~~-----~~~~~~---~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~L 187 (263)
T 2a14_A 116 ELEGNSG-----RWEEKE---EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLL 187 (263)
T ss_dssp HHTTCGG-----GHHHHH---HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE
T ss_pred hcCCCCc-----chhhHH---HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHc
Confidence 0000000 000000 00001132 778888763211 112468999999876543 367789999999999
Q ss_pred cCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 325 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 325 KPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
||||++|-.+++--.+.. .|........++.+++++++++.||++++.+.
T Consensus 188 KPGG~li~~~~~~~~~~~-~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 188 KPGGHLVTTVTLRLPSYM-VGKREFSCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp EEEEEEEEEEESSCCEEE-ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCcEEEEEEeecCccce-eCCeEeeccccCHHHHHHHHHHCCCEEEEEee
Confidence 999999975433110000 01100012357999999999999999988653
No 18
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.66 E-value=1.2e-15 Score=137.08 Aligned_cols=140 Identities=11% Similarity=-0.025 Sum_probs=104.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|+++..|++++ ..|+|+|+|..|+..++-.+... .+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------------------~~- 87 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL----------------------------GL- 87 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----------------------------TC-
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc----------------------------CC-
Confidence 56799999999999999999997 89999999999998776332110 00
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
.++.++.+|+.++. ...++||+|++...+....+...+++.++++|||||++|-..+..... ..
T Consensus 88 ----------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--~~- 151 (219)
T 3dh0_A 88 ----------KNVEVLKSEENKIP---LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEER--DK- 151 (219)
T ss_dssp ----------TTEEEEECBTTBCS---SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCC--SS-
T ss_pred ----------CcEEEEecccccCC---CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccc--cc-
Confidence 13678889987752 235789999998766655678899999999999999999532211110 00
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.+.....++.+++++++++.||++++..
T Consensus 152 -~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 152 -GPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp -SCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred -CCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 1112345899999999999999998854
No 19
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.66 E-value=8e-16 Score=142.90 Aligned_cols=107 Identities=15% Similarity=0.087 Sum_probs=85.7
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+++.|.+.++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 39 ~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~--------------------- 92 (263)
T 3pfg_A 39 DLAALVRRHSP-----KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN--------------------- 92 (263)
T ss_dssp HHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC---------------------
T ss_pred HHHHHHHhhCC-----CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC---------------------
Confidence 46666666654 4579999999999999999999999999999999998665110
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee-c---cCChhhHHHHHHHHHHhccCCc
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-F---IDTAHNIVEYIEIISRILKDGG 328 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F-F---IDta~Ni~~yi~~I~~~LKPGG 328 (397)
.++.++.+|+.++.. .++||+|++.+ . +.+..++..+|+.++++|||||
T Consensus 93 -----------------------~~~~~~~~d~~~~~~----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG 145 (263)
T 3pfg_A 93 -----------------------PDAVLHHGDMRDFSL----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDG 145 (263)
T ss_dssp -----------------------TTSEEEECCTTTCCC----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEE
T ss_pred -----------------------CCCEEEECChHHCCc----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCc
Confidence 026778899887532 58999999875 3 4455678899999999999999
Q ss_pred EEEE
Q 015966 329 VWIN 332 (397)
Q Consensus 329 ~wIN 332 (397)
++|-
T Consensus 146 ~l~i 149 (263)
T 3pfg_A 146 VVVV 149 (263)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9994
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.66 E-value=2.1e-15 Score=135.76 Aligned_cols=152 Identities=21% Similarity=0.235 Sum_probs=107.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.|..+++.+... ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 33 ~~~~~l~~~~~~-------~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------------------ 87 (220)
T 3hnr_A 33 HYEDILEDVVNK-------SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKL------------------ 87 (220)
T ss_dssp THHHHHHHHHHT-------CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHS------------------
T ss_pred HHHHHHHHhhcc-------CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhC------------------
Confidence 345566666532 4679999999999999999999999999999999997665211
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhH--HHHHHHHHHhccCC
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNI--VEYIEIISRILKDG 327 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni--~~yi~~I~~~LKPG 327 (397)
+ .++.++.+|+.++.. . ++||+|++...+....+. ..+|+.++++||||
T Consensus 88 ---------------~----------~~~~~~~~d~~~~~~---~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 138 (220)
T 3hnr_A 88 ---------------P----------KEFSITEGDFLSFEV---P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG 138 (220)
T ss_dssp ---------------C----------TTCCEESCCSSSCCC---C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT
T ss_pred ---------------C----------CceEEEeCChhhcCC---C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC
Confidence 0 126778899887532 2 899999998755544444 34999999999999
Q ss_pred cEEEEecCCcchhhh---------ccCC-----CCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 328 GVWINLGPLLYHFAD---------LYGQ-----EDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 328 G~wIN~GPLlYh~~d---------~~g~-----~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
|++|-..|..-.... ..+- ......-.+.++++++++++||+++....
T Consensus 139 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 139 GKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp CEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred CEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 999964333211000 0000 00011335899999999999999988653
No 21
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.64 E-value=3.4e-15 Score=135.33 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=85.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
..+.+.+.+.+.... .++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+...
T Consensus 21 ~~~~~~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~----------------- 82 (246)
T 1y8c_A 21 KKWSDFIIEKCVENN-LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ----------------- 82 (246)
T ss_dssp HHHHHHHHHHHHTTT-CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHHHHHHhC-CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhc-----------------
Confidence 334444444433211 15679999999999999999999999999999999998776322100
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee-c---cCChhhHHHHHHHHHHhccCC
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-F---IDTAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F-F---IDta~Ni~~yi~~I~~~LKPG 327 (397)
+.++.++.+|+.++.. .++||+|++.. . +.+..++...++.++++||||
T Consensus 83 -----------------------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pg 135 (246)
T 1y8c_A 83 -----------------------GLKPRLACQDISNLNI----NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG 135 (246)
T ss_dssp -----------------------TCCCEEECCCGGGCCC----SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE
T ss_pred -----------------------CCCeEEEecccccCCc----cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCC
Confidence 0026778899877532 27899999876 3 444578899999999999999
Q ss_pred cEEEE
Q 015966 328 GVWIN 332 (397)
Q Consensus 328 G~wIN 332 (397)
|++|-
T Consensus 136 G~l~~ 140 (246)
T 1y8c_A 136 GVFIF 140 (246)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99984
No 22
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.64 E-value=1.7e-15 Score=139.34 Aligned_cols=158 Identities=16% Similarity=0.140 Sum_probs=111.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
.+...++.|.+.++. .++.+|||+|||+|.++..||++ |..|+|+|+|..|+..++-.....
T Consensus 20 ~~~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~-------------- 82 (256)
T 1nkv_A 20 FTEEKYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEEL-------------- 82 (256)
T ss_dssp CCHHHHHHHHHHTCC---CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHT--------------
T ss_pred CCHHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc--------------
Confidence 344566777666642 26779999999999999999987 889999999999998776322100
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCc
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 328 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG 328 (397)
....++.+..+|+.++. . .++||+|++...+....+...+|+.++++|||||
T Consensus 83 ------------------------~~~~~v~~~~~d~~~~~---~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG 134 (256)
T 1nkv_A 83 ------------------------GVSERVHFIHNDAAGYV---A-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGG 134 (256)
T ss_dssp ------------------------TCTTTEEEEESCCTTCC---C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEE
T ss_pred ------------------------CCCcceEEEECChHhCC---c-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCe
Confidence 01124788999987752 2 5789999987554444467899999999999999
Q ss_pred EEEEecCCcc------hhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 329 VWINLGPLLY------HFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 329 ~wIN~GPLlY------h~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
+++-..|..- .+..... .......++.+++.++++++||++++.
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 135 IMLIGEPYWRQLPATEEIAQACG-VSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp EEEEEEEEETTCCSSHHHHHTTT-CSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred EEEEecCcccCCCChHHHHHHHh-cccccccCCHHHHHHHHHHCCCeeEEE
Confidence 9995433210 0000000 011123579999999999999998764
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.63 E-value=3.3e-15 Score=137.30 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=104.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 188 ESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
.++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-... .
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~------------------------------ 100 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVS---G------------------------------ 100 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCC---S------------------------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhh---c------------------------------
Confidence 36779999999999999999998 9999999999999987652110 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEEEecCCcc---hhh
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLY---HFA 341 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wIN~GPLlY---h~~ 341 (397)
..++.+..+|+.++. ...++||+|++...+... .+...+++.++++|||||+++-..+..- .+.
T Consensus 101 --------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 169 (266)
T 3ujc_A 101 --------NNKIIFEANDILTKE---FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWD 169 (266)
T ss_dssp --------CTTEEEEECCTTTCC---CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCC
T ss_pred --------CCCeEEEECccccCC---CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccch
Confidence 013778899987752 236899999998665554 7889999999999999999995332110 000
Q ss_pred hccC--CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 342 DLYG--QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 342 d~~g--~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.... ..+.....++.+++.+++++.||++++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 170 DEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 0000 000011247999999999999999988653
No 24
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.63 E-value=3.8e-15 Score=134.17 Aligned_cols=149 Identities=13% Similarity=0.162 Sum_probs=103.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+... .+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------------------~~~~-- 79 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSP----------------------------GLNQ-- 79 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCC----------------------------SCCS--
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc----------------------------CCcc--
Confidence 5679999999999999999999999999999999998776332110 0000
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeecc---CChhhHHHHHHHHHHhccCCcEEEEecCCc-ch---hh
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI---DTAHNIVEYIEIISRILKDGGVWINLGPLL-YH---FA 341 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFI---Dta~Ni~~yi~~I~~~LKPGG~wIN~GPLl-Yh---~~ 341 (397)
....++.+..+|+.++. ...++||+|++...+ ........+++.++++|||||++|-..+.. +. +.
T Consensus 80 ----~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 152 (235)
T 3sm3_A 80 ----KTGGKAEFKVENASSLS---FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYR 152 (235)
T ss_dssp ----SSSCEEEEEECCTTSCC---SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHH
T ss_pred ----ccCcceEEEEecccccC---CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHH
Confidence 01124788999987753 235889999987643 344445689999999999999998532210 00 00
Q ss_pred --------h--ccC----------CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 342 --------D--LYG----------QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 342 --------d--~~g----------~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
. ..+ ..+.....++.++++++++++||+++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 153 KRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp HHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred HHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 0 000 00001235799999999999999999854
No 25
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.63 E-value=7.3e-15 Score=139.83 Aligned_cols=159 Identities=11% Similarity=0.010 Sum_probs=110.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.++.+.+.+.. .++.+|||+|||+|.++..||++ |..|+|+|+|..|+..++-.+...
T Consensus 60 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 118 (302)
T 3hem_A 60 KRKLALDKLNL---EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV------------------ 118 (302)
T ss_dssp HHHHHHHTTCC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS------------------
T ss_pred HHHHHHHHcCC---CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 34444444432 26779999999999999999999 999999999999998776322110
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh---------hhHHHHHHHHHHh
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA---------HNIVEYIEIISRI 323 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta---------~Ni~~yi~~I~~~ 323 (397)
....++.+..+|+.++ .++||+|++...+... .++..+++.+.++
T Consensus 119 --------------------~~~~~v~~~~~d~~~~------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~ 172 (302)
T 3hem_A 119 --------------------DSPRRKEVRIQGWEEF------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNL 172 (302)
T ss_dssp --------------------CCSSCEEEEECCGGGC------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHS
T ss_pred --------------------CCCCceEEEECCHHHc------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHh
Confidence 1122478899998775 3789999987543222 5678999999999
Q ss_pred ccCCcEEEEecCCcchhh--hccC-----------------CCCCccccCCHHHHHHHHHhCCCEEEEEeecCCCC
Q 015966 324 LKDGGVWINLGPLLYHFA--DLYG-----------------QEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTY 380 (397)
Q Consensus 324 LKPGG~wIN~GPLlYh~~--d~~g-----------------~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i~~~Y 380 (397)
|||||+++-..+...... ...+ ..+ .....+.+++.+++++.||+++........|
T Consensus 173 LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y 247 (302)
T 3hem_A 173 TPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFP-GGRLPRISQVDYYSSNAGWKVERYHRIGANY 247 (302)
T ss_dssp SCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCT-TCCCCCHHHHHHHHHHHTCEEEEEEECGGGH
T ss_pred cCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCC-CCCCCCHHHHHHHHHhCCcEEEEEEeCchhH
Confidence 999999995322110000 0000 001 1235789999999999999999876544444
No 26
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.63 E-value=7.1e-15 Score=133.72 Aligned_cols=157 Identities=15% Similarity=0.150 Sum_probs=107.9
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
|..+.+.+.+.++.. .++.+|||+|||+|+++..|+++ |..|+|+|+|..|+..++-.+..
T Consensus 28 ~~~~~~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------------- 90 (234)
T 3dtn_A 28 FDDFYGVSVSIASVD--TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG--------------- 90 (234)
T ss_dssp HHHHHHHHHHTCCCS--CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS---------------
T ss_pred HHHHHHHHHHHhhcC--CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc---------------
Confidence 334555666665532 36789999999999999999999 88999999999999876621100
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccC
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKD 326 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKP 326 (397)
..++.++.+|+.++.. .++||+|++...+... .....+++.++++|||
T Consensus 91 --------------------------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 140 (234)
T 3dtn_A 91 --------------------------NLKVKYIEADYSKYDF----EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKE 140 (234)
T ss_dssp --------------------------CTTEEEEESCTTTCCC----CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred --------------------------CCCEEEEeCchhccCC----CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCC
Confidence 0137889999887532 2799999988644332 3345799999999999
Q ss_pred CcEEEEecCCc-------------ch-hhhccCC----------CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 327 GGVWINLGPLL-------------YH-FADLYGQ----------EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 327 GG~wIN~GPLl-------------Yh-~~d~~g~----------~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
||++|-..+.. |. +....+. .......++.+++.++++++||+.++..
T Consensus 141 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 212 (234)
T 3dtn_A 141 SGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCI 212 (234)
T ss_dssp EEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeee
Confidence 99999532211 00 0000010 0011234799999999999999998754
No 27
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=1.5e-15 Score=139.73 Aligned_cols=148 Identities=12% Similarity=0.002 Sum_probs=104.5
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
...|.+.++. .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.
T Consensus 22 ~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---------------------- 76 (259)
T 2p35_A 22 ARDLLAQVPL---ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---------------------- 76 (259)
T ss_dssp HHHHHTTCCC---SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----------------------
T ss_pred HHHHHHhcCC---CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----------------------
Confidence 3344444432 25679999999999999999999 89999999999999766511
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
. .++.+..+|+.++. ..++||+|++...+...++....|+.++++|||||+++-
T Consensus 77 -----------~-----------~~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 77 -----------L-----------PNTNFGKADLATWK----PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp -----------S-----------TTSEEEECCTTTCC----CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEE
T ss_pred -----------C-----------CCcEEEECChhhcC----ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEE
Confidence 0 12567888987753 257899999987665556788999999999999999995
Q ss_pred ecCCcch---------------hhhccCCC-CCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 333 LGPLLYH---------------FADLYGQE-DEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 333 ~GPLlYh---------------~~d~~g~~-~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
..|-.+. |....... +.....++.+++.++++++||++...
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 187 (259)
T 2p35_A 131 QMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVDVW 187 (259)
T ss_dssp EEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEEEE
T ss_pred EeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceEEE
Confidence 3332111 11100000 11123479999999999999986553
No 28
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.63 E-value=9.6e-15 Score=132.75 Aligned_cols=113 Identities=17% Similarity=0.175 Sum_probs=88.8
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.|..+++.+.+.++ ++.+|||+|||+|+++..|+++ ..|+|+|+|..|+..++-.+...
T Consensus 19 ~~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~--------------- 77 (243)
T 3d2l_A 19 PYPEWVAWVLEQVE-----PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMET--------------- 77 (243)
T ss_dssp CHHHHHHHHHHHSC-----TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred cHHHHHHHHHHHcC-----CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhc---------------
Confidence 46678888888775 3479999999999999999999 99999999999998776322100
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee----ccCChhhHHHHHHHHHHhcc
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF----FIDTAHNIVEYIEIISRILK 325 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F----FIDta~Ni~~yi~~I~~~LK 325 (397)
..++.++.+|+.++.. .++||+|++.+ ++....++..+++.++++||
T Consensus 78 -------------------------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 128 (243)
T 3d2l_A 78 -------------------------NRHVDFWVQDMRELEL----PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLT 128 (243)
T ss_dssp -------------------------TCCCEEEECCGGGCCC----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEE
T ss_pred -------------------------CCceEEEEcChhhcCC----CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcC
Confidence 0126778899877522 37899999753 45566788899999999999
Q ss_pred CCcEEEE
Q 015966 326 DGGVWIN 332 (397)
Q Consensus 326 PGG~wIN 332 (397)
|||++|-
T Consensus 129 pgG~l~~ 135 (243)
T 3d2l_A 129 DGGKLLF 135 (243)
T ss_dssp EEEEEEE
T ss_pred CCeEEEE
Confidence 9999984
No 29
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.63 E-value=9e-16 Score=136.50 Aligned_cols=159 Identities=18% Similarity=0.152 Sum_probs=110.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
|+.+.+.+.+.++.. ++ +|||+|||+|+++..|+++ |..|+|+|+|..|+..++-.+...
T Consensus 29 ~~~~~~~~~~~~~~~---~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~--------------- 89 (219)
T 3dlc_A 29 YPIIAENIINRFGIT---AG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADA--------------- 89 (219)
T ss_dssp HHHHHHHHHHHHCCC---EE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred cHHHHHHHHHhcCCC---CC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhc---------------
Confidence 455667776666532 33 9999999999999999998 889999999999998776332110
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcE
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~ 329 (397)
....++.+..+|+.++- ...++||+|++...+....+...+++.++++|||||+
T Consensus 90 -----------------------~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 143 (219)
T 3dlc_A 90 -----------------------NLNDRIQIVQGDVHNIP---IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGK 143 (219)
T ss_dssp -----------------------TCTTTEEEEECBTTBCS---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred -----------------------cccCceEEEEcCHHHCC---CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCE
Confidence 01124788999988753 2357999999886555556788999999999999999
Q ss_pred EEEecCCcch-h--------hhccCCCC----CccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 330 WINLGPLLYH-F--------ADLYGQED----EMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 330 wIN~GPLlYh-~--------~d~~g~~~----~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
++-..+..-. . ........ ...-.++.+++.++++++||+.++..
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 144 TYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred EEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 9853222100 0 00000000 00113478999999999999887644
No 30
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.63 E-value=1.7e-15 Score=135.71 Aligned_cols=156 Identities=17% Similarity=0.147 Sum_probs=108.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
+...|.+.++ .++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 21 ~~~~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~---------------------- 74 (230)
T 3cc8_A 21 VNPNLLKHIK----KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL---------------------- 74 (230)
T ss_dssp CCHHHHTTCC----TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS----------------------
T ss_pred HHHHHHHHhc----cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------------------
Confidence 4445555554 25679999999999999999999999999999999987654100
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~ 333 (397)
..+..+|+.+.. .+..+++||+|++...+....+...+++.++++|||||++|-.
T Consensus 75 ------------------------~~~~~~d~~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 75 ------------------------DHVVLGDIETMD-MPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp ------------------------SEEEESCTTTCC-CCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred ------------------------CcEEEcchhhcC-CCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 134556765531 1233578999998876655556779999999999999999964
Q ss_pred cCCcchhh-------hcc-----CC-CCCccccCCHHHHHHHHHhCCCEEEEEeecCCCC
Q 015966 334 GPLLYHFA-------DLY-----GQ-EDEMSIELSLEDVKRVALHYGFEFEKEKTIETTY 380 (397)
Q Consensus 334 GPLlYh~~-------d~~-----g~-~~~~~ieLS~EEl~~ll~~~GFeii~e~~i~~~Y 380 (397)
.|....+. ... +. .+.....++.++++++++++||++++.......|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 189 (230)
T 3cc8_A 130 IPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRVYVDH 189 (230)
T ss_dssp EECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred eCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEecccCh
Confidence 44321110 000 00 0111234799999999999999999866544444
No 31
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.63 E-value=8.9e-15 Score=136.04 Aligned_cols=159 Identities=13% Similarity=0.121 Sum_probs=111.6
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
+++.|.+.++. .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++......
T Consensus 49 ~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 107 (273)
T 3bus_A 49 LTDEMIALLDV---RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA------------------ 107 (273)
T ss_dssp HHHHHHHHSCC---CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc------------------
Confidence 45555555542 25679999999999999999985 899999999999998776322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.+..+|+.++- ..+++||+|++...+....+...+|+.++++|||||+++-
T Consensus 108 --------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 108 --------------------GLANRVTFSYADAMDLP---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp --------------------TCTTTEEEEECCTTSCC---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEE
T ss_pred --------------------CCCcceEEEECccccCC---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEE
Confidence 01123788899987752 2357999999987776667788999999999999999984
Q ss_pred ecCC----cchhhhc----cCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 333 LGPL----LYHFADL----YGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 333 ~GPL----lYh~~d~----~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
..+. ....... ..........++.+++.++++++||+++....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 165 ADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp EEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred EEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEEC
Confidence 2211 1110000 000000123589999999999999999886543
No 32
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.63 E-value=2.4e-15 Score=139.43 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=103.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+... . +
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~--~---- 84 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGN--------------------------G--H---- 84 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT--------------------------T--C----
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc--------------------------C--C----
Confidence 5679999999999999999999999999999999998776322100 0 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe---cCCc---chhhh
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL---GPLL---YHFAD 342 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~---GPLl---Yh~~d 342 (397)
.++.++.+|+.++- ..+++||+|++.+.+...++....|+.++++|||||+++-. +|-. -.+..
T Consensus 85 -------~~v~~~~~d~~~l~---~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~ 154 (260)
T 1vl5_A 85 -------QQVEYVQGDAEQMP---FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYN 154 (260)
T ss_dssp -------CSEEEEECCC-CCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHH
T ss_pred -------CceEEEEecHHhCC---CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHH
Confidence 13678899987752 33589999999876555567789999999999999999853 2211 00000
Q ss_pred ---ccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 343 ---LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 343 ---~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
... .+.....++.+++.+++++.||+++...
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 188 (260)
T 1vl5_A 155 YVEKER-DYSHHRAWKKSDWLKMLEEAGFELEELH 188 (260)
T ss_dssp HHHHHH-CTTCCCCCBHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHhc-CccccCCCCHHHHHHHHHHCCCeEEEEE
Confidence 000 1111235799999999999999988744
No 33
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.63 E-value=3.9e-15 Score=134.50 Aligned_cols=149 Identities=14% Similarity=0.215 Sum_probs=100.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|+++..|+++| ..|+|+|+|..|+..++-.+... .+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------~~~~ 80 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL----------------------------RLPR 80 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC----------------------------CCCH
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh----------------------------cCCc
Confidence 46799999999999999999987 58999999999998776322100 0000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCcch--hhh
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYH--FAD 342 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh--~~d 342 (397)
. ...++.++.+|+.... ...++||+|++...+. +.+++..+++.++++|||||++|.....-|. |..
T Consensus 81 ~------~~~~v~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 151 (217)
T 3jwh_A 81 N------QWERLQLIQGALTYQD---KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFAN 151 (217)
T ss_dssp H------HHTTEEEEECCTTSCC---GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-
T ss_pred c------cCcceEEEeCCccccc---ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcc
Confidence 0 0014788999975432 2347899999876444 4446789999999999999988853221111 100
Q ss_pred c-cCC--CCCccccCCHHHHH----HHHHhCCCEEEEEe
Q 015966 343 L-YGQ--EDEMSIELSLEDVK----RVALHYGFEFEKEK 374 (397)
Q Consensus 343 ~-~g~--~~~~~ieLS~EEl~----~ll~~~GFeii~e~ 374 (397)
. .+. .......++.+++. +++++.||+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 152 LPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQP 190 (217)
T ss_dssp ----------CCSCBCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred cccccccccccccccCHHHHHHHHHHHHHHcCceEEEEe
Confidence 0 000 01124568999999 99999999987653
No 34
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=1.1e-15 Score=143.66 Aligned_cols=138 Identities=17% Similarity=0.077 Sum_probs=100.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++-.+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------------------------- 99 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------------------------------------- 99 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-------------------------------------
Confidence 5679999999999999999999999999999999997665110
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcc---hhhh---
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLY---HFAD--- 342 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlY---h~~d--- 342 (397)
.++.+..+|+.++. . .++||+|++.+.+....+....++.++++|||||+++-..|..- .+..
T Consensus 100 -------~~~~~~~~d~~~~~---~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 168 (279)
T 3ccf_A 100 -------PHLHFDVADARNFR---V-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALY 168 (279)
T ss_dssp -------TTSCEEECCTTTCC---C-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHH
T ss_pred -------CCCEEEECChhhCC---c-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHH
Confidence 01567888887742 1 47899999887665555678999999999999999985222110 0000
Q ss_pred ----ccCC----CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 343 ----LYGQ----EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 343 ----~~g~----~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
..+. .......++.+++.++++++||+++..+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 169 NALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp HHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEE
Confidence 0110 0001234699999999999999998854
No 35
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.62 E-value=8e-15 Score=139.38 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=83.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
+.+..+.+.++. ++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+...
T Consensus 70 ~~~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 127 (299)
T 3g2m_A 70 SEAREFATRTGP----VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEA------------------ 127 (299)
T ss_dssp HHHHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTS------------------
T ss_pred HHHHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhc------------------
Confidence 344444444442 3349999999999999999999999999999999998776322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhccCCcE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LKPGG~ 329 (397)
++. ...++.++.+|+.++.. .++||+|++.+ ..-+..++..+|+.++++|||||+
T Consensus 128 --------~~~----------~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~ 185 (299)
T 3g2m_A 128 --------PAD----------VRDRCTLVQGDMSAFAL----DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGK 185 (299)
T ss_dssp --------CHH----------HHTTEEEEECBTTBCCC----SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEE
T ss_pred --------ccc----------cccceEEEeCchhcCCc----CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcE
Confidence 000 00237889999988521 58899988653 222335688999999999999999
Q ss_pred EEE
Q 015966 330 WIN 332 (397)
Q Consensus 330 wIN 332 (397)
+|-
T Consensus 186 l~~ 188 (299)
T 3g2m_A 186 FLL 188 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 994
No 36
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.62 E-value=7.4e-15 Score=133.49 Aligned_cols=149 Identities=14% Similarity=0.187 Sum_probs=104.7
Q ss_pred HHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcc
Q 015966 178 LDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDS 256 (397)
Q Consensus 178 L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~ 256 (397)
|.+.++.. ++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++-...
T Consensus 35 l~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------------------------ 87 (243)
T 3bkw_A 35 LRAMLPEV---GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP------------------------ 87 (243)
T ss_dssp HHHHSCCC---TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC------------------------
T ss_pred HHHhcccc---CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc------------------------
Confidence 44445422 567999999999999999999999 99999999999986652110
Q ss_pred cCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCC
Q 015966 257 DQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPL 336 (397)
Q Consensus 257 ~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPL 336 (397)
..++.+..+|+.++. ...++||+|++...+...++...+++.++++|||||++|-..|.
T Consensus 88 ------------------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 88 ------------------DTGITYERADLDKLH---LPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp ------------------SSSEEEEECCGGGCC---CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------------cCCceEEEcChhhcc---CCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 012677888987752 23578999998876555557889999999999999999842211
Q ss_pred ---------cchhhhc---------cCCC----------CCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 337 ---------LYHFADL---------YGQE----------DEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 337 ---------lYh~~d~---------~g~~----------~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.|.+... +-.. .......|.+++.++++++||++++..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 212 (243)
T 3bkw_A 147 PIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVE 212 (243)
T ss_dssp HHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEE
T ss_pred cccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeec
Confidence 0110000 0000 001122589999999999999998854
No 37
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.61 E-value=1e-14 Score=137.04 Aligned_cols=154 Identities=12% Similarity=0.059 Sum_probs=106.8
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHH-HcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEIS-HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA-~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.++.+.+.++. .++.+|||+|||+|.++..+| +.|..|+|+|+|..|+..++-.+...
T Consensus 52 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~------------------ 110 (287)
T 1kpg_A 52 KIDLALGKLGL---QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS------------------ 110 (287)
T ss_dssp HHHHHHTTTTC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC------------------
T ss_pred HHHHHHHHcCC---CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 44445544432 256799999999999999999 66999999999999998776322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~w 330 (397)
....++.+..+|+.++ + ++||+|++...+... .+...+|+.++++|||||++
T Consensus 111 --------------------~~~~~~~~~~~d~~~~---~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 164 (287)
T 1kpg_A 111 --------------------ENLRSKRVLLAGWEQF---D---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVM 164 (287)
T ss_dssp --------------------CCCSCEEEEESCGGGC---C---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCCeEEEECChhhC---C---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEE
Confidence 0112377888998664 2 789999988654433 57889999999999999999
Q ss_pred EEecCCcch-----------------hhh---ccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 331 INLGPLLYH-----------------FAD---LYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 331 IN~GPLlYh-----------------~~d---~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
+-..+.... +.+ .+ ..+ .....|.+++.++++++||++++....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 165 LLHTITGLHPKEIHERGLPMSFTFARFLKFIVTE-IFP-GGRLPSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp EEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHH-TST-TCCCCCHHHHHHHHHTTTCEEEEEEEC
T ss_pred EEEEecCCCccccccccccccccccchhhhHHhe-eCC-CCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 952221100 000 00 001 012359999999999999999986543
No 38
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=2.8e-15 Score=137.79 Aligned_cols=142 Identities=13% Similarity=0.196 Sum_probs=101.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++-.+... +
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------ 126 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE--------------------------G------ 126 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG--------------------------G------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhc--------------------------C------
Confidence 567999999999999999999976 8999999999998776322100 0
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChh--hHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~--Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
..++.++.+|+.++.. ..++||+|++...+.... .+..+|+.++++|||||++|-..|.... ...+.
T Consensus 127 -------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-~~~~~ 195 (241)
T 2ex4_A 127 -------KRVRNYFCCGLQDFTP---EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE-GVILD 195 (241)
T ss_dssp -------GGEEEEEECCGGGCCC---CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS-SEEEE
T ss_pred -------CceEEEEEcChhhcCC---CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC-cceec
Confidence 0126778889877532 346899999886544333 3678999999999999999953332211 00000
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.....+..+.++++++++++||++++..
T Consensus 196 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 196 -DVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp -TTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred -ccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 0111345699999999999999998865
No 39
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.61 E-value=7.7e-15 Score=129.19 Aligned_cols=138 Identities=16% Similarity=0.142 Sum_probs=99.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-..... . +
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~--~---- 79 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIE--------------------------N--L---- 79 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------------------------T--C----
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhC--------------------------C--C----
Confidence 4569999999999999999999999999999999998776322110 0 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~ 346 (397)
.++.+..+|+.++. . .++||+|++...+. ...++..+++.++++|||||+++-+.+..- .....
T Consensus 80 -------~~~~~~~~d~~~~~---~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~ 145 (199)
T 2xvm_A 80 -------DNLHTRVVDLNNLT---F-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDT---ADYPC 145 (199)
T ss_dssp -------TTEEEEECCGGGCC---C-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCC---SSSCC
T ss_pred -------CCcEEEEcchhhCC---C-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeecc---CCcCC
Confidence 12677889987742 2 57899999875433 234788999999999999999774322210 00111
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 347 EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 347 ~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
++.....++.+|++++++. |++++.+
T Consensus 146 ~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 146 TVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp CSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred CCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 1122456899999999976 9998844
No 40
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.61 E-value=5.3e-15 Score=135.59 Aligned_cols=142 Identities=15% Similarity=0.048 Sum_probs=102.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|+++..|+++|+. |+|+|+|..|+..++-.+..
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------------------------- 138 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG---------------------------------- 138 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT----------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc----------------------------------
Confidence 5789999999999999999999764 99999999999876622100
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
..++.+..+|+.++. ...++||+|++...+... .++..+|+.++++|||||++|-..|..-.......
T Consensus 139 -------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 208 (254)
T 1xtp_A 139 -------MPVGKFILASMETAT---LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD 208 (254)
T ss_dssp -------SSEEEEEESCGGGCC---CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE
T ss_pred -------CCceEEEEccHHHCC---CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceec
Confidence 012677889987752 235789999988655443 56889999999999999999954332100000000
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.....+..+.++++++++++||++++...
T Consensus 209 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 209 -KEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp -TTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred -ccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 11124567999999999999999988653
No 41
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=1.1e-14 Score=133.90 Aligned_cols=100 Identities=21% Similarity=0.298 Sum_probs=78.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+...
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~---------------------------------- 86 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKER---------------------------------- 86 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhc----------------------------------
Confidence 5679999999999999999999999999999999998776322100
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
+.++.++.+|+.++.. .++||+|++.+ ..-...++..+++.++++|||||++|-
T Consensus 87 ------~~~v~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 87 ------NLKIEFLQGDVLEIAF----KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp ------TCCCEEEESCGGGCCC----CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCceEEEECChhhccc----CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 0126788999987532 36899998653 222446788999999999999999983
No 42
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.61 E-value=1.2e-14 Score=137.23 Aligned_cols=141 Identities=17% Similarity=0.112 Sum_probs=104.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.+...
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 128 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA--------------------------------- 128 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc---------------------------------
Confidence 5679999999999999999998 999999999999998776322110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchh-------
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHF------- 340 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~------- 340 (397)
....++.++.+|+.++- ..+++||+|++...+....+...+|+.++++|||||+++-..|...+.
T Consensus 129 -----~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 200 (297)
T 2o57_A 129 -----GLADNITVKYGSFLEIP---CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQ 200 (297)
T ss_dssp -----TCTTTEEEEECCTTSCS---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGH
T ss_pred -----CCCcceEEEEcCcccCC---CCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHH
Confidence 01123788999988752 235789999988765555567899999999999999999643321110
Q ss_pred --hhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 341 --ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 341 --~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
..... .....+.+++.++++++||++++..
T Consensus 201 ~~~~~~~----~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 201 PILDRIK----LHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp HHHHHHT----CSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHhc----CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 00000 0123589999999999999998854
No 43
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.60 E-value=1.4e-14 Score=133.23 Aligned_cols=155 Identities=10% Similarity=-0.014 Sum_probs=108.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+..+.+.++.. .++.+|||+|||+|.++..|++++. .|+|+|+|..|+..++-.....
T Consensus 33 ~~~~~l~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------ 92 (257)
T 3f4k_A 33 ATRKAVSFINEL--TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKA------------------ 92 (257)
T ss_dssp HHHHHHTTSCCC--CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHc------------------
Confidence 445555555432 2567999999999999999999976 9999999999998776322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.++.+|+.++- ...++||+|++...+... +...+++.++++|||||+++-
T Consensus 93 --------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 93 --------------------NCADRVKGITGSMDNLP---FQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp --------------------TCTTTEEEEECCTTSCS---SCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEE
T ss_pred --------------------CCCCceEEEECChhhCC---CCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEE
Confidence 01123788999987652 235899999988655544 577999999999999999995
Q ss_pred ecCCcchhh------hccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 333 LGPLLYHFA------DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 333 ~GPLlYh~~------d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
..|...... ..... ...-..+.+++.++++++||+++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 149 SEASWFTSERPAEIEDFWMD--AYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp EEEEESSSCCCHHHHHHHHH--HCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred EEeeccCCCChHHHHHHHHH--hCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 433211100 00000 00113589999999999999998854
No 44
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.60 E-value=1.3e-14 Score=131.03 Aligned_cols=149 Identities=15% Similarity=0.264 Sum_probs=100.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|+++..|+++| ..|+|+|+|..|+..++-.+... .+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------~~~~ 80 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID----------------------------RLPE 80 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG----------------------------GSCH
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh----------------------------cccc
Confidence 45799999999999999999998 69999999999998776322100 0000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC--hhhHHHHHHHHHHhccCCcEEEEecCCcch--hhh
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPLLYH--FAD 342 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh--~~d 342 (397)
. ...++.++.+|+.... ...++||+|++...+.. .+++..+++.++++|||||++|.....-|. |..
T Consensus 81 ~------~~~~v~~~~~d~~~~~---~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 151 (219)
T 3jwg_A 81 M------QRKRISLFQSSLVYRD---KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGN 151 (219)
T ss_dssp H------HHTTEEEEECCSSSCC---GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCC
T ss_pred c------cCcceEEEeCcccccc---cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcc
Confidence 0 0013788999975432 23578999998764433 235689999999999999988853221110 100
Q ss_pred cc-CC--CCCccccCCHHHHH----HHHHhCCCEEEEEe
Q 015966 343 LY-GQ--EDEMSIELSLEDVK----RVALHYGFEFEKEK 374 (397)
Q Consensus 343 ~~-g~--~~~~~ieLS~EEl~----~ll~~~GFeii~e~ 374 (397)
.. +. .......++.++++ +++++.||+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 152 LFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp T-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred cCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEe
Confidence 00 00 01123467999999 88999999887754
No 45
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.59 E-value=1.7e-14 Score=138.28 Aligned_cols=155 Identities=13% Similarity=-0.018 Sum_probs=107.6
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCC
Q 015966 176 EELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLS 254 (397)
Q Consensus 176 ~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s 254 (397)
+.|.+.++.. .++.+|||+|||+|.++..||++ |..|+|+|+|..|+..++-.+...
T Consensus 106 ~~l~~~l~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------------- 163 (312)
T 3vc1_A 106 EFLMDHLGQA--GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL-------------------- 163 (312)
T ss_dssp HHHHTTSCCC--CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHhccC--CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--------------------
Confidence 4455555421 36789999999999999999999 999999999999998776322110
Q ss_pred cccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEec
Q 015966 255 DSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 334 (397)
Q Consensus 255 ~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~G 334 (397)
....++.++.+|+.++- ...++||+|++...+... +...+++.++++|||||++|-..
T Consensus 164 ------------------~~~~~v~~~~~d~~~~~---~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 164 ------------------RIDDHVRSRVCNMLDTP---FDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp ------------------TCTTTEEEEECCTTSCC---CCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCceEEEECChhcCC---CCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 01124788999987752 235899999987654443 37899999999999999999533
Q ss_pred CCcchhhhccCC------CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 335 PLLYHFADLYGQ------EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 335 PLlYh~~d~~g~------~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+........... .....-..+.+++.++++++||++++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 222 GCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp EEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 221110000000 0000124689999999999999998854
No 46
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.59 E-value=1.5e-14 Score=134.86 Aligned_cols=157 Identities=11% Similarity=0.008 Sum_probs=109.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
..+..+.+.++. ..++.+|||+|||+|.++..||+++. .|+|+|+|..|+..++-.+...
T Consensus 32 ~~~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------- 92 (267)
T 3kkz_A 32 EVTLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS----------------- 92 (267)
T ss_dssp HHHHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc-----------------
Confidence 344555555542 13678999999999999999999976 9999999999998776332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
....++.++.+|+.++. ...++||+|++...+... +...+++.++++|||||+++
T Consensus 93 ---------------------~~~~~v~~~~~d~~~~~---~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~ 147 (267)
T 3kkz_A 93 ---------------------GLQNRVTGIVGSMDDLP---FRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLA 147 (267)
T ss_dssp ---------------------TCTTTEEEEECCTTSCC---CCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEE
T ss_pred ---------------------CCCcCcEEEEcChhhCC---CCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEE
Confidence 01124788999987753 235899999987644433 57899999999999999999
Q ss_pred EecCCcchhh------hccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 332 NLGPLLYHFA------DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 332 N~GPLlYh~~------d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
-..+...... .... .......+.+++.++++++||+++....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 148 VSECSWFTDERPAEINDFWM--DAYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp EEEEEESSSCCCHHHHHHHH--HHCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEeeecCCCChHHHHHHHH--HhCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 5433211000 0000 0001235899999999999999988653
No 47
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.59 E-value=2.4e-14 Score=129.75 Aligned_cols=107 Identities=20% Similarity=0.216 Sum_probs=84.3
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+.+.|.++.+ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 29 ~~~~~l~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~--------------------- 82 (239)
T 3bxo_A 29 DIADLVRSRTP-----EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL--------------------- 82 (239)
T ss_dssp HHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC---------------------
T ss_pred HHHHHHHHhcC-----CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC---------------------
Confidence 35566666553 4679999999999999999999999999999999997665110
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee----ccCChhhHHHHHHHHHHhccCCc
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF----FIDTAHNIVEYIEIISRILKDGG 328 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F----FIDta~Ni~~yi~~I~~~LKPGG 328 (397)
.++.+..+|+.++. . .++||+|++.+ ++....++..+++.++++|||||
T Consensus 83 -----------------------~~~~~~~~d~~~~~---~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 135 (239)
T 3bxo_A 83 -----------------------PDATLHQGDMRDFR---L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGG 135 (239)
T ss_dssp -----------------------TTCEEEECCTTTCC---C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEE
T ss_pred -----------------------CCCEEEECCHHHcc---c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCe
Confidence 01567888987752 1 47899999643 46566788999999999999999
Q ss_pred EEEE
Q 015966 329 VWIN 332 (397)
Q Consensus 329 ~wIN 332 (397)
++|-
T Consensus 136 ~l~~ 139 (239)
T 3bxo_A 136 VVVV 139 (239)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9994
No 48
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.59 E-value=1.3e-14 Score=138.90 Aligned_cols=154 Identities=12% Similarity=0.033 Sum_probs=107.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.++.+.+.++. .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.+...
T Consensus 78 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 136 (318)
T 2fk8_A 78 KVDLNLDKLDL---KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI------------------ 136 (318)
T ss_dssp HHHHHHTTSCC---CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS------------------
T ss_pred HHHHHHHhcCC---CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 44455554432 25679999999999999999998 999999999999998776332100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~w 330 (397)
....++.+..+|+.++ .++||+|++...+... ++...+++.+.++|||||++
T Consensus 137 --------------------~~~~~v~~~~~d~~~~------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 190 (318)
T 2fk8_A 137 --------------------DTNRSRQVLLQGWEDF------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRM 190 (318)
T ss_dssp --------------------CCSSCEEEEESCGGGC------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCceEEEECChHHC------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEE
Confidence 0112377888998764 2689999988655433 67889999999999999999
Q ss_pred EEecCCcch---hh--------------hcc--CCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 331 INLGPLLYH---FA--------------DLY--GQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 331 IN~GPLlYh---~~--------------d~~--g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
+-..|.... +. +.. ...+ .....+.+++.+++++.||++++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 191 TVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFP-GGRLPSTEMMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp EEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTST-TCCCCCHHHHHHHHHHTTCBCCCCEE
T ss_pred EEEEeccCCchhhhhccccccccccchhhHHHHhcCC-CCcCCCHHHHHHHHHhCCCEEEEEEe
Confidence 953221110 00 000 0001 12235999999999999999987543
No 49
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.58 E-value=6.1e-15 Score=135.56 Aligned_cols=159 Identities=14% Similarity=0.160 Sum_probs=110.4
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.+..+++.|.+..... .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+.
T Consensus 22 ~~~~~~~~l~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----------------- 82 (263)
T 2yqz_A 22 VAGQIATAMASAVHPK--GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIA----------------- 82 (263)
T ss_dssp HHHHHHHHHHHHCCCS--SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTT-----------------
T ss_pred HHHHHHHHHHHhhcCC--CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----------------
Confidence 3556777775422211 256799999999999999999999999999999999987662210
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcE
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~ 329 (397)
....++.+..+|+.++. ..+++||+|++.+.+...++....++.++++|||||+
T Consensus 83 -----------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 83 -----------------------GVDRKVQVVQADARAIP---LPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGA 136 (263)
T ss_dssp -----------------------TSCTTEEEEESCTTSCC---SCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEE
T ss_pred -----------------------ccCCceEEEEcccccCC---CCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcE
Confidence 00123778889987652 2357899999987666556788999999999999999
Q ss_pred EEEe-c-C--Cc---c--hhh---hccCCC-CCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 330 WINL-G-P--LL---Y--HFA---DLYGQE-DEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 330 wIN~-G-P--Ll---Y--h~~---d~~g~~-~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
++-. + + -. + .+. ...+.+ +......+.+++.+++++.||+++..
T Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 137 LLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 9853 1 1 00 0 000 001111 10122468999999999999997764
No 50
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.58 E-value=3.4e-15 Score=141.26 Aligned_cols=185 Identities=16% Similarity=0.106 Sum_probs=105.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHH-cCCeEEEEeCCHHHHHHHHhhhhcccccCccc-cccccccccC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISH-LGFISQGNEFSYYMMICSSFILNHTETAGEWN-IYPWIHSNCN 251 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~-IyPfi~~~Sn 251 (397)
++..|.+.++.. ..++.+|||+|||+|+++..+++ .|..|+|+|+|..|+..++-.++.......+. ..+++.....
T Consensus 57 ~~~~l~~~l~~~-~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 57 KLRCLAQTFATG-EVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHHTS-CSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC-CCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 344555544321 12567999999999997665655 37899999999999987763221100000000 0000000000
Q ss_pred C----CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCC---CCCCCccEEEEeeccCC----hhhHHHHHHHH
Q 015966 252 S----LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP---SQVGAWDAVVTCFFIDT----AHNIVEYIEII 320 (397)
Q Consensus 252 ~----~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~---~~~~~fD~VvT~FFIDt----a~Ni~~yi~~I 320 (397)
. .....+++. ....++.+|+.+....+ ...++||+|++.+.+.. .+++..+|+.+
T Consensus 136 ~~~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~ 201 (289)
T 2g72_A 136 KGECWQDKERQLRA--------------RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHI 201 (289)
T ss_dssp SCCCHHHHHHHHHH--------------HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHH
T ss_pred cccchhhhHHHHHh--------------hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHH
Confidence 0 000000000 01345667776621111 12467999999875543 56789999999
Q ss_pred HHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 321 SRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 321 ~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+++|||||++|-.+.+--.+... +........++.+++++++++.||+++...
T Consensus 202 ~r~LkpGG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 202 TTLLRPGGHLLLIGALEESWYLA-GEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp HTTEEEEEEEEEEEEESCCEEEE-TTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHhcCCCCEEEEEEecCcceEEc-CCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 99999999999644221111000 101001235799999999999999998854
No 51
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.58 E-value=2.1e-14 Score=132.30 Aligned_cols=144 Identities=15% Similarity=0.171 Sum_probs=103.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+... . +
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~--~---- 68 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEK--------------------------G--V---- 68 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH--------------------------T--C----
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--------------------------C--C----
Confidence 6779999999999999999999999999999999998776322100 0 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCC---c---chhhh
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPL---L---YHFAD 342 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPL---l---Yh~~d 342 (397)
.++.+..+|+.++- ..+++||+|++.+.+....+....++.++++|||||+++-..+. . -.+..
T Consensus 69 -------~~v~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 138 (239)
T 1xxl_A 69 -------ENVRFQQGTAESLP---FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVN 138 (239)
T ss_dssp -------CSEEEEECBTTBCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHH
T ss_pred -------CCeEEEecccccCC---CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHH
Confidence 12677889987642 33589999998865554456789999999999999999853221 1 00100
Q ss_pred ccC--CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 343 LYG--QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 343 ~~g--~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
... ..+.....++.+++.++++++||+++...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 172 (239)
T 1xxl_A 139 HLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQ 172 (239)
T ss_dssp HHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHhccccccCCCCHHHHHHHHHHCCCcEEEEE
Confidence 000 00111235799999999999999988754
No 52
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.57 E-value=1.1e-14 Score=126.16 Aligned_cols=130 Identities=15% Similarity=0.070 Sum_probs=98.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++.. .
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---------------------------------~---- 59 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---------------------------------F---- 59 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---------------------------------C----
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---------------------------------C----
Confidence 567999999999999999999998999999999999766511 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~ 348 (397)
.++.+..+| ..+ ..++||+|++...+...++...+++.++++|||||+++-..+.. .+. ...+
T Consensus 60 -------~~v~~~~~d-~~~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~---~~~-~~~~ 122 (170)
T 3i9f_A 60 -------DSVITLSDP-KEI-----PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK---ENT-GIGP 122 (170)
T ss_dssp -------TTSEEESSG-GGS-----CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS---SCC-SSSS
T ss_pred -------CCcEEEeCC-CCC-----CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc---ccc-ccCc
Confidence 125677788 221 25789999998877766778899999999999999999532211 110 0011
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 349 EMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 349 ~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.....++.++++++++ ||++++..
T Consensus 123 ~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp CGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred hHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 2234589999999998 99998865
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.57 E-value=8.1e-14 Score=125.34 Aligned_cols=127 Identities=15% Similarity=0.139 Sum_probs=94.6
Q ss_pred ccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccC
Q 015966 159 WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAG 238 (397)
Q Consensus 159 WS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~ 238 (397)
|++....+.......+++.|.+.++ ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~---- 83 (227)
T 1ve3_A 13 YTDINSQEYRSRIETLEPLLMKYMK-----KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSR---- 83 (227)
T ss_dssp TTCTTSHHHHHHHHHHHHHHHHSCC-----SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----
T ss_pred hhcccHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----
Confidence 3333333333445667777777664 3579999999999999999999999999999999998776322100
Q ss_pred ccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeec--cCChhhHHHH
Q 015966 239 EWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHNIVEY 316 (397)
Q Consensus 239 ~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FF--IDta~Ni~~y 316 (397)
+.++.++.+|+.++. ...++||+|++... +....+..++
T Consensus 84 ------------------------------------~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~~~~~~~~~~~~~ 124 (227)
T 1ve3_A 84 ------------------------------------ESNVEFIVGDARKLS---FEDKTFDYVIFIDSIVHFEPLELNQV 124 (227)
T ss_dssp ------------------------------------TCCCEEEECCTTSCC---SCTTCEEEEEEESCGGGCCHHHHHHH
T ss_pred ------------------------------------CCCceEEECchhcCC---CCCCcEEEEEEcCchHhCCHHHHHHH
Confidence 012678889987752 23578999998755 5566778899
Q ss_pred HHHHHHhccCCcEEEEe
Q 015966 317 IEIISRILKDGGVWINL 333 (397)
Q Consensus 317 i~~I~~~LKPGG~wIN~ 333 (397)
++.++++|||||++|-.
T Consensus 125 l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 125 FKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp HHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEE
Confidence 99999999999999843
No 54
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=1.9e-14 Score=134.42 Aligned_cols=152 Identities=14% Similarity=0.092 Sum_probs=105.9
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
+..+.+.|.+.++. .++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++ ..
T Consensus 19 ~~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-------~~------------- 75 (261)
T 3ege_A 19 DIRIVNAIINLLNL---PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAV-------VH------------- 75 (261)
T ss_dssp CHHHHHHHHHHHCC---CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSC-------CC-------------
T ss_pred cHHHHHHHHHHhCC---CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHH-------hc-------------
Confidence 34567777776653 25789999999999999999999999999999999985322 00
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEE
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~w 330 (397)
.++.+..+|+.++- ...++||+|++.+.+....+...+++.++++|| ||++
T Consensus 76 -------------------------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~ 126 (261)
T 3ege_A 76 -------------------------PQVEWFTGYAENLA---LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTI 126 (261)
T ss_dssp -------------------------TTEEEECCCTTSCC---SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCE
T ss_pred -------------------------cCCEEEECchhhCC---CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEE
Confidence 02678889987742 235899999998766555778899999999999 9966
Q ss_pred EEe--cCC----cchhhhccC-CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 331 INL--GPL----LYHFADLYG-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 331 IN~--GPL----lYh~~d~~g-~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
+-+ +|- .|...-... .........+.+++. +++++||+.+....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 127 VLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp EEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred EEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 532 211 111000000 000012235788899 99999998887653
No 55
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.55 E-value=5.3e-14 Score=133.19 Aligned_cols=156 Identities=14% Similarity=0.109 Sum_probs=110.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.+++.+.+.+... .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-....
T Consensus 8 ~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~---------------- 69 (284)
T 3gu3_A 8 DYVSFLVNTVWKI--TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL---------------- 69 (284)
T ss_dssp HHHHHHHHTTSCC--CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS----------------
T ss_pred HHHHHHHHHHhcc--CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh----------------
Confidence 3556666655432 26789999999999999999998 78999999999999877632210
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcE
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~ 329 (397)
.+.++.+..+|+.++.. .++||+|++...+...++...+++.++++|||||+
T Consensus 70 ------------------------~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 121 (284)
T 3gu3_A 70 ------------------------LPYDSEFLEGDATEIEL----NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGK 121 (284)
T ss_dssp ------------------------SSSEEEEEESCTTTCCC----SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEE
T ss_pred ------------------------cCCceEEEEcchhhcCc----CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCE
Confidence 01137889999887532 46899999988766667788999999999999999
Q ss_pred EEEecCCc------chhhhc--------------cC--CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 330 WINLGPLL------YHFADL--------------YG--QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 330 wIN~GPLl------Yh~~d~--------------~g--~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
++-.-|.. +...+. +. ......-..+.+++.++++++||+.+...
T Consensus 122 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 122 IICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp EEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHHHTTCEEEEEE
T ss_pred EEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHHHcCCCeEEEE
Confidence 99655541 111100 00 00000112456789999999999988763
No 56
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=1.2e-13 Score=120.29 Aligned_cols=125 Identities=18% Similarity=0.118 Sum_probs=96.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~------------------------------------- 88 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF------------------------------------- 88 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC-------------------------------------
Confidence 5679999999999999999999999999999999997665211
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEe-ecc--CChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFI--DTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~-FFI--Dta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
.++.+..+|+.++. ...++||+|++. ..+ -..++...+++.++++|||||++|-.-|.
T Consensus 89 -------~~~~~~~~d~~~~~---~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~--------- 149 (195)
T 3cgg_A 89 -------PEARWVVGDLSVDQ---ISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA--------- 149 (195)
T ss_dssp -------TTSEEEECCTTTSC---CCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET---------
T ss_pred -------CCCcEEEcccccCC---CCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC---------
Confidence 01466778887642 225789999986 222 23466789999999999999999842110
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.-.++.+++.+++++.||++++..
T Consensus 150 -----~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 150 -----GRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp -----TSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred -----CCCcCHHHHHHHHHHcCCEEeeee
Confidence 123789999999999999998854
No 57
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.55 E-value=1.1e-13 Score=130.24 Aligned_cols=108 Identities=13% Similarity=0.137 Sum_probs=78.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+... .. ...+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~---~~---------------------~~~~---- 108 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNR---RK---------------------EPAF---- 108 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TT---------------------SHHH----
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhc---cc---------------------cccc----
Confidence 4579999999999999999999999999999999998776321100 00 0000
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEe-ecc---CC----hhhHHHHHHHHHHhccCCcEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFI---DT----AHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~-FFI---Dt----a~Ni~~yi~~I~~~LKPGG~wI 331 (397)
.++.+..+|+.++...-...++||+|++. ..+ .. ..++..+++.++++|||||++|
T Consensus 109 -------~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (293)
T 3thr_A 109 -------DKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLV 172 (293)
T ss_dssp -------HTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEE
T ss_pred -------ceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEE
Confidence 12667888887753000125789999986 433 22 3448899999999999999999
No 58
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.54 E-value=3.9e-14 Score=126.13 Aligned_cols=155 Identities=18% Similarity=0.144 Sum_probs=105.1
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChh-HHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRL-ALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRL-a~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
.|..+++.+...- ++.+|||+|||+|.+ ...+++.|+.|+|+|+|..|+..++-.+...
T Consensus 10 ~~~~~~~~~~~~~------~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------- 69 (209)
T 2p8j_A 10 QLYRFLKYCNESN------LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------------- 69 (209)
T ss_dssp HHHHHHHHHHHSS------SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH--------------
T ss_pred hHHHHHHHHhccC------CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--------------
Confidence 3555666665432 457999999999998 5677888999999999999998776322100
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhcc
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILK 325 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LK 325 (397)
..++.+..+|+.++. ...++||+|++.. ++. ..+....++.++++||
T Consensus 70 --------------------------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~Lk 119 (209)
T 2p8j_A 70 --------------------------NFKLNISKGDIRKLP---FKDESMSFVYSYGTIFHMR-KNDVKEAIDEIKRVLK 119 (209)
T ss_dssp --------------------------TCCCCEEECCTTSCC---SCTTCEEEEEECSCGGGSC-HHHHHHHHHHHHHHEE
T ss_pred --------------------------CCceEEEECchhhCC---CCCCceeEEEEcChHHhCC-HHHHHHHHHHHHHHcC
Confidence 012567888887752 2357899999753 342 4678899999999999
Q ss_pred CCcEEEEe--c--CCcch---------hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 326 DGGVWINL--G--PLLYH---------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 326 PGG~wIN~--G--PLlYh---------~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
|||+++-. . ...|. |.......+.....++.+|+.+++...||...++.
T Consensus 120 pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 120 PGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp EEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEEE
T ss_pred CCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeeee
Confidence 99999841 1 11110 00000001111235799999999999999887654
No 59
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.54 E-value=6.5e-14 Score=131.79 Aligned_cols=146 Identities=16% Similarity=0.145 Sum_probs=104.1
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
..+++.+... ++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+...
T Consensus 110 ~~~~~~~~~~-------~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~----------------- 165 (286)
T 3m70_A 110 GDVVDAAKII-------SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKE----------------- 165 (286)
T ss_dssp HHHHHHHHHS-------CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHhhcc-------CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 3466665532 4679999999999999999999999999999999998776332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~ 329 (397)
. .++.+..+|+.++.. .++||+|++...+. +.+.+..+++.+.++|||||+
T Consensus 166 ---------~--------------~~~~~~~~d~~~~~~----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 218 (286)
T 3m70_A 166 ---------N--------------LNISTALYDINAANI----QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGY 218 (286)
T ss_dssp ---------T--------------CCEEEEECCGGGCCC----CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEE
T ss_pred ---------C--------------CceEEEEeccccccc----cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 0 026788899877532 58899999875333 345688999999999999999
Q ss_pred EEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 330 WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 330 wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
++-+.+.. ......+......++.+++++++.. |+++..
T Consensus 219 l~i~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 219 NLIVAAMS---TDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp EEEEEEBC---CSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred EEEEEecC---CCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 77422110 0111111122467899999999955 998874
No 60
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.53 E-value=3e-14 Score=135.62 Aligned_cols=106 Identities=10% Similarity=0.096 Sum_probs=83.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+++.|.++.+ .+.+|||+|||+|.++..|+++|.+|+|+|+|..|+..|+ +
T Consensus 28 ~l~~~l~~~~~-----~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~-------~---------------- 79 (257)
T 4hg2_A 28 ALFRWLGEVAP-----ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQAL-------R---------------- 79 (257)
T ss_dssp HHHHHHHHHSS-----CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCC-------C----------------
T ss_pred HHHHHHHHhcC-----CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhh-------h----------------
Confidence 37788888765 3468999999999999999999999999999999984221 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
..++.+..+|+.++- ..+++||+|++..-+.-. +...++++++++|||||+++-
T Consensus 80 ----------------------~~~v~~~~~~~e~~~---~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 80 ----------------------HPRVTYAVAPAEDTG---LPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp ----------------------CTTEEEEECCTTCCC---CCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------------cCCceeehhhhhhhc---ccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEE
Confidence 013678889987752 346899999987544332 356899999999999999974
No 61
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.52 E-value=9.3e-14 Score=129.59 Aligned_cols=144 Identities=13% Similarity=0.158 Sum_probs=102.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.+... .
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------------------~--- 85 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN----------------------------G--- 85 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----------------------------T---
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----------------------------C---
Confidence 6789999999999999999999 689999999999998776322110 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecC----Ccchhhh
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGP----LLYHFAD 342 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GP----LlYh~~d 342 (397)
..++.++.+|+.++- ...++||+|++...+....+...+++.++++|||||+++-.-| ..++-..
T Consensus 86 --------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 154 (276)
T 3mgg_A 86 --------IKNVKFLQANIFSLP---FEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEG 154 (276)
T ss_dssp --------CCSEEEEECCGGGCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCC
T ss_pred --------CCCcEEEEcccccCC---CCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCc
Confidence 013678889987752 2358999999987666666677999999999999999995321 1111000
Q ss_pred c---------cCC-CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 343 L---------YGQ-EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 343 ~---------~g~-~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
. ... .....-.++.+++.++++++||+++..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~ 196 (276)
T 3mgg_A 155 KKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVE 196 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEe
Confidence 0 000 0000123567899999999999998855
No 62
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.51 E-value=1.6e-13 Score=124.44 Aligned_cols=146 Identities=21% Similarity=0.118 Sum_probs=104.3
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.|...++.|.+..| +.+|||+|||+|+++..|+++ +|+|+|..|+..++-.
T Consensus 34 ~~~~~~~~l~~~~~------~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~------------------- 84 (219)
T 1vlm_A 34 AYLSELQAVKCLLP------EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR------------------- 84 (219)
T ss_dssp HHHHHHHHHHHHCC------SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-------------------
T ss_pred hHHHHHHHHHHhCC------CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-------------------
Confidence 35566777777654 458999999999999999987 9999999999765410
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcE
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~ 329 (397)
++.++.+|+.++. ...++||+|++...+....+...+++.+.++|||||+
T Consensus 85 ---------------------------~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 134 (219)
T 1vlm_A 85 ---------------------------GVFVLKGTAENLP---LKDESFDFALMVTTICFVDDPERALKEAYRILKKGGY 134 (219)
T ss_dssp ---------------------------TCEEEECBTTBCC---SCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEE
T ss_pred ---------------------------CCEEEEcccccCC---CCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcE
Confidence 1456778876642 2357899999887655556678999999999999999
Q ss_pred EEEecCCcch-----hhhc-cCC-CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 330 WINLGPLLYH-----FADL-YGQ-EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 330 wIN~GPLlYh-----~~d~-~g~-~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+|-..|.... +... .+. .......++.+++.++++++||++++..
T Consensus 135 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 135 LIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp EEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 9953322111 1100 000 0011234799999999999999998844
No 63
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=1.9e-13 Score=125.28 Aligned_cols=154 Identities=12% Similarity=-0.052 Sum_probs=101.6
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLS 254 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s 254 (397)
...+...++.. .++.+|||+|||+|+++..||++|..|+|+|+|..|+..++-.+.
T Consensus 44 ~~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~---------------------- 99 (245)
T 3ggd_A 44 VVDLPRFELLF--NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT---------------------- 99 (245)
T ss_dssp HHHHHHHTTTS--CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC----------------------
T ss_pred HHHHHHHhhcc--CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc----------------------
Confidence 34444444332 256799999999999999999999999999999999987652110
Q ss_pred cccCccccccCCCCCCCCCCCCcceeEecccccccCCC-C-CCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEE
Q 015966 255 DSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP-S-QVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 255 ~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~-~-~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~w 330 (397)
..++.++.+|+.++.... . ....||+|++...+... .+...+++.++++|||||++
T Consensus 100 --------------------~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 159 (245)
T 3ggd_A 100 --------------------AANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAM 159 (245)
T ss_dssp --------------------CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEE
T ss_pred --------------------ccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEE
Confidence 012678888987742200 0 01248999987654433 37889999999999999986
Q ss_pred EEe--cCCc--c--hhhhccCCCC----------CccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 331 INL--GPLL--Y--HFADLYGQED----------EMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 331 IN~--GPLl--Y--h~~d~~g~~~----------~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+-+ ++-- + ......+..+ .....++.+++.+++ .||+++...
T Consensus 160 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aGf~~~~~~ 217 (245)
T 3ggd_A 160 YLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--PDFEILSQG 217 (245)
T ss_dssp EEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--TTEEEEEEE
T ss_pred EEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--CCCEEEecc
Confidence 632 2110 0 0000001111 012247999999999 899999865
No 64
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.51 E-value=1.5e-13 Score=122.97 Aligned_cols=134 Identities=16% Similarity=0.195 Sum_probs=101.2
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
.+++.|.+..+ ++.+|||+|||+|+++..|++.|. .|+|+|+|..|+..++..+...
T Consensus 49 ~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------- 106 (205)
T 3grz_A 49 LAMLGIERAMV-----KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALN----------------- 106 (205)
T ss_dssp HHHHHHHHHCS-----SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHhcc-----CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 46666666543 467999999999999999999988 8999999999998776322110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
. . .++.+..+|+.+.. .++||+|++...+ +.+..+++.++++|||||+++
T Consensus 107 ---------~------------~-~~v~~~~~d~~~~~-----~~~fD~i~~~~~~---~~~~~~l~~~~~~L~~gG~l~ 156 (205)
T 3grz_A 107 ---------G------------I-YDIALQKTSLLADV-----DGKFDLIVANILA---EILLDLIPQLDSHLNEDGQVI 156 (205)
T ss_dssp ---------T------------C-CCCEEEESSTTTTC-----CSCEEEEEEESCH---HHHHHHGGGSGGGEEEEEEEE
T ss_pred ---------C------------C-CceEEEeccccccC-----CCCceEEEECCcH---HHHHHHHHHHHHhcCCCCEEE
Confidence 0 0 11678889987642 3789999987543 446788999999999999998
Q ss_pred EecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 332 NLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 332 N~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
-.++ ..-+.+++.+++++.||++++..
T Consensus 157 ~~~~----------------~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 157 FSGI----------------DYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp EEEE----------------EGGGHHHHHHHHHHTTEEEEEEE
T ss_pred EEec----------------CcccHHHHHHHHHHcCCceEEee
Confidence 4221 12257899999999999998743
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.51 E-value=1.4e-13 Score=123.63 Aligned_cols=130 Identities=10% Similarity=0.042 Sum_probs=93.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+..
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----------------------------------- 95 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR----------------------------------- 95 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT-----------------------------------
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc-----------------------------------
Confidence 567999999999999999999999999999999999876622100
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
..++.++.+|+.++. ..++||+|++.. ++.....+..+++.++++|||||++|-.-|.--.... .
T Consensus 96 ------~~~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-~- 163 (216)
T 3ofk_A 96 ------WSHISWAATDILQFS----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRR-W- 163 (216)
T ss_dssp ------CSSEEEEECCTTTCC----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHH-T-
T ss_pred ------CCCeEEEEcchhhCC----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchh-h-
Confidence 013788999988764 258899999875 3455556678999999999999999943222111111 0
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEE
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFE 371 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii 371 (397)
......+.+..++.. +|..+
T Consensus 164 -----~~~~~~~~~~~~~~~-~~~~~ 183 (216)
T 3ofk_A 164 -----GHVAGAETVITILTE-ALTEV 183 (216)
T ss_dssp -----TCSCCHHHHHHHHHH-HSEEE
T ss_pred -----hhhhhHHHHHHHHHh-hccce
Confidence 113566777777765 35544
No 66
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.50 E-value=4.9e-13 Score=127.77 Aligned_cols=145 Identities=10% Similarity=0.051 Sum_probs=100.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|+++..||.. |..|+|+|+|..|+..++-.....
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------------------- 166 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH------------------------------- 166 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------
Confidence 5679999999999999999622 679999999999998776322100
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhccCCcEEEEec----CC--
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWINLG----PL-- 336 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LKPGG~wIN~G----PL-- 336 (397)
....++.++.+|+.++- .. ++||+|++.. ++........+++.++++|||||++|-.. |.
T Consensus 167 -------~~~~~v~~~~~d~~~~~---~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~ 235 (305)
T 3ocj_A 167 -------ALAGQITLHRQDAWKLD---TR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALS 235 (305)
T ss_dssp -------TTGGGEEEEECCGGGCC---CC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTC
T ss_pred -------CCCCceEEEECchhcCC---cc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCccc
Confidence 11123788999998853 22 8999999864 34455556679999999999999999421 11
Q ss_pred -cchhh-hccC--------------CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 337 -LYHFA-DLYG--------------QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 337 -lYh~~-d~~g--------------~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.+.|. +... ........++.+++.++++++||++++...
T Consensus 236 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 236 PDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp TTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 11111 0000 000011237999999999999999988664
No 67
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.50 E-value=8.4e-14 Score=138.63 Aligned_cols=157 Identities=18% Similarity=0.112 Sum_probs=106.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
..+.+.+.+.++. .++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..|+-. .
T Consensus 93 ~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~-------~------------- 149 (416)
T 4e2x_A 93 AMLARDFLATELT---GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK-------G------------- 149 (416)
T ss_dssp HHHHHHHHHTTTC---SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT-------T-------------
T ss_pred HHHHHHHHHHhCC---CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc-------C-------------
Confidence 3455666665542 2567999999999999999999999999999999999766510 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
++.. ...+..++..++. ..+++||+|++...+...+++..+++.++++|||||+++
T Consensus 150 ------------~~~~---------~~~~~~~~~~~l~---~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~ 205 (416)
T 4e2x_A 150 ------------IRVR---------TDFFEKATADDVR---RTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFV 205 (416)
T ss_dssp ------------CCEE---------CSCCSHHHHHHHH---HHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEE
T ss_pred ------------CCcc---------eeeechhhHhhcc---cCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEE
Confidence 0000 0011223333321 124789999998876666688999999999999999999
Q ss_pred EecCCcchh-hh-ccC-CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 332 NLGPLLYHF-AD-LYG-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 332 N~GPLlYh~-~d-~~g-~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
-.-|..-.. .. .+. ...+....+|.+++.+++++.||+++....
T Consensus 206 i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 206 FEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp EEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 543321111 00 000 001123358999999999999999988553
No 68
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=7e-14 Score=128.52 Aligned_cols=151 Identities=17% Similarity=0.093 Sum_probs=97.8
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
+++..+.+..+. ++.+|||+|||+|.++..|++.|. .|+|+|+|..|+..|+-... .
T Consensus 48 ~~~~~l~~~~~~----~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~---~--------------- 105 (236)
T 1zx0_A 48 PYMHALAAAASS----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAP---R--------------- 105 (236)
T ss_dssp HHHHHHHHHHTT----TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGG---G---------------
T ss_pred HHHHHHHhhcCC----CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHH---h---------------
Confidence 355555555432 567999999999999999999887 89999999999987762111 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEE-eeccC----ChhhHHHHHHHHHHhccC
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT-CFFID----TAHNIVEYIEIISRILKD 326 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT-~FFID----ta~Ni~~yi~~I~~~LKP 326 (397)
.+.++.++.+|+.++.. +..+++||+|++ .|-+. ...+...+++.++++|||
T Consensus 106 ----------------------~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkp 162 (236)
T 1zx0_A 106 ----------------------QTHKVIPLKGLWEDVAP-TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp ----------------------CSSEEEEEESCHHHHGG-GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred ----------------------cCCCeEEEecCHHHhhc-ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCC
Confidence 01236788999887621 223589999998 44321 223455779999999999
Q ss_pred CcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEE
Q 015966 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEF 370 (397)
Q Consensus 327 GG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFei 370 (397)
||+++-+-.. ++.......-........++....+.+.||+.
T Consensus 163 gG~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 163 GGVLTYCNLT--SWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEEEECCHH--HHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CeEEEEEecC--cHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 9999853211 11110000000011223456667788899984
No 69
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.49 E-value=9.9e-14 Score=126.93 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=92.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-. .
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---------------------------------~---- 90 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---------------------------------A---- 90 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---------------------------------C----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---------------------------------C----
Confidence 567999999999999999999999999999999999766511 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCC-CCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQ-VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~-~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
.++.++.+|+.+.. |.. +++||+|++. .+....++.++++|||||+++..+
T Consensus 91 -------~~~~~~~~d~~~~~--~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~------------- 142 (226)
T 3m33_A 91 -------PHADVYEWNGKGEL--PAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYVG------------- 142 (226)
T ss_dssp -------TTSEEEECCSCSSC--CTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEE-------------
T ss_pred -------CCceEEEcchhhcc--CCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeC-------------
Confidence 12677888985532 233 5799999987 245578999999999999999211
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
-..+.+++.+++.+.||++....
T Consensus 143 ----~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 143 ----PRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp ----SSSCCTHHHHHHHHTTCEEEEEE
T ss_pred ----CcCCHHHHHHHHHHCCCeEEEEE
Confidence 13466789999999999998744
No 70
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.49 E-value=4.5e-13 Score=130.00 Aligned_cols=152 Identities=13% Similarity=0.030 Sum_probs=93.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|+++..+++.| ..|+|+|+|..||..|+-..... . .. .+.+.+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~---~-~~---------------~~~~~~----- 103 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKL---N-SG---------------IKTKYY----- 103 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH---C-C-------------------CCC-----
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhc---c-cc---------------cccccc-----
Confidence 46799999999999777766664 78999999999999887332110 0 00 000000
Q ss_pred CCCCCCCCCcceeEeccc------ccccCCCCCCCCccEEEEeecc----CChhhHHHHHHHHHHhccCCcEEEEecCC-
Q 015966 268 HPASAGITEGFSMCGGDF------VEVYSDPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRILKDGGVWINLGPL- 336 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF------~ely~~~~~~~~fD~VvT~FFI----Dta~Ni~~yi~~I~~~LKPGG~wIN~GPL- 336 (397)
.+.+.++|+ .++.. +...++||+|++.|-+ ++. ++..+|+.++++|||||++|-.-|-
T Consensus 104 ---------~~~f~~~d~~~d~~~~~l~~-~~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 104 ---------KFDYIQETIRSDTFVSSVRE-VFYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp ---------EEEEEECCTTSSSHHHHHHT-TCCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred ---------ccchhhhhcccchhhhhhhc-cccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 133445554 22211 1124799999876532 333 5679999999999999999953221
Q ss_pred ---cchhh-------------h----------c----c---C-CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 337 ---LYHFA-------------D----------L----Y---G-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 337 ---lYh~~-------------d----------~----~---g-~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.+.+. . + + + ..+-...-++.++|+++++++||+++....
T Consensus 173 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 173 DKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp HHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCcccccccccccceeeeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 11000 0 0 0 0 000001236789999999999999988653
No 71
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.48 E-value=9.6e-14 Score=132.76 Aligned_cols=176 Identities=15% Similarity=0.208 Sum_probs=105.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhccccc------------------------Ccccc
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETA------------------------GEWNI 242 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~------------------------~~~~I 242 (397)
++.+|||+|||+|+++..||++ +..|+|+|+|..|+..|+-.+...... ....-
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4679999999999999999998 789999999999999887443211000 00011
Q ss_pred ccccccccCCCCcccCccccccCCCCCC---CCCCCCcceeEecccccccC--CCCCCCCccEEEEeecc---C---Chh
Q 015966 243 YPWIHSNCNSLSDSDQLRPVSIPDIHPA---SAGITEGFSMCGGDFVEVYS--DPSQVGAWDAVVTCFFI---D---TAH 311 (397)
Q Consensus 243 yPfi~~~Sn~~s~~~qlr~v~iPDv~p~---~~~~~~~ls~~~GDF~ely~--~~~~~~~fD~VvT~FFI---D---ta~ 311 (397)
||..... ...++..|..... ....+.++.+..+|+..... .+...++||+|++...+ . ...
T Consensus 126 ~p~~~~~--------~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~ 197 (292)
T 3g07_A 126 FPASLTA--------SRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE 197 (292)
T ss_dssp ------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH
T ss_pred ccchhhh--------ccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH
Confidence 2211100 0111222221110 11233579999999875320 01235899999987543 2 444
Q ss_pred hHHHHHHHHHHhccCCcEEEEecCCcch-hhhccCCC-----CCccccCCHHHHHHHHHh--CCCEEEEE
Q 015966 312 NIVEYIEIISRILKDGGVWINLGPLLYH-FADLYGQE-----DEMSIELSLEDVKRVALH--YGFEFEKE 373 (397)
Q Consensus 312 Ni~~yi~~I~~~LKPGG~wIN~GPLlYh-~~d~~g~~-----~~~~ieLS~EEl~~ll~~--~GFeii~e 373 (397)
++.++|+.++++|||||++|- .|..|. |....... .-..+.+..+++..++.+ +||+.++.
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil-~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~ 266 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVL-EPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYEL 266 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEE-ECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEE-ecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEE
Confidence 788999999999999999994 333332 11100000 001356788999999998 99977664
No 72
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.47 E-value=1.8e-13 Score=135.97 Aligned_cols=150 Identities=19% Similarity=0.165 Sum_probs=102.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccc-ccc
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP-VSI 264 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~-v~i 264 (397)
++.+|||+|||+|+++..|+++ +..|+|+|+|..|+..++-.+...... ..+ ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---------------------~~g~~~- 140 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEK---------------------FFGSPS- 140 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHH---------------------HHSSTT-
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhh---------------------cccccC-
Confidence 5779999999999999999986 679999999999998776322110000 000 00
Q ss_pred CCCCCCCCCCCCcceeEecccccccCC---CCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCc----
Q 015966 265 PDIHPASAGITEGFSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL---- 337 (397)
Q Consensus 265 PDv~p~~~~~~~~ls~~~GDF~ely~~---~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLl---- 337 (397)
..++.++.+|+.++... +...++||+|++...+....+...+|+.++++|||||+++-..+..
T Consensus 141 ----------~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 210 (383)
T 4fsd_A 141 ----------RSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRL 210 (383)
T ss_dssp ----------CCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCC
T ss_pred ----------CCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccccc
Confidence 12378899998875211 2346799999998766655678899999999999999998421110
Q ss_pred c-hhhhc---cCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 338 Y-HFADL---YGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 338 Y-h~~d~---~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
. ..... .+.. ..-.++.+++.++++++||+.++
T Consensus 211 ~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~aGF~~v~ 247 (383)
T 4fsd_A 211 SEAAQQDPILYGEC--LGGALYLEDFRRLVAEAGFRDVR 247 (383)
T ss_dssp CHHHHHCHHHHHTT--CTTCCBHHHHHHHHHHTTCCCEE
T ss_pred CHhHhhhHHHhhcc--cccCCCHHHHHHHHHHCCCceEE
Confidence 0 00000 0000 11247889999999999998765
No 73
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.47 E-value=3.6e-13 Score=118.37 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=90.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|+++..||++|..|+|+|+|..|+..|+..+... .
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~--------------------------~------- 68 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDL--------------------------G------- 68 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 5679999999999999999999999999999999998877332110 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEee-ccC--------ChhhHHHHHHHHHHhccCCcEEEEecCCcch
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID--------TAHNIVEYIEIISRILKDGGVWINLGPLLYH 339 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F-FID--------ta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh 339 (397)
. .++.++.+|+.++... ..++||+|+..+ |+. ...+....++.++++|||||+++-. .|.
T Consensus 69 -----~-~~v~~~~~~~~~l~~~--~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~---~~~ 137 (185)
T 3mti_A 69 -----I-ENTELILDGHENLDHY--VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM---IYY 137 (185)
T ss_dssp -----C-CCEEEEESCGGGGGGT--CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE---EC-
T ss_pred -----C-CcEEEEeCcHHHHHhh--ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE---EeC
Confidence 0 1256677777665321 257899998763 433 4456678899999999999999852 232
Q ss_pred hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 340 FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 340 ~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.... + . ...-...++.+.+...+|.+.+...
T Consensus 138 ~~~~-~-~---~~~~~~~~~~~~l~~~~~~~~~~~~ 168 (185)
T 3mti_A 138 GHDG-G-D---MEKDAVLEYVIGLDQRVFTAMLYQP 168 (185)
T ss_dssp -------C---HHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCC-C-H---HHHHHHHHHHHhCCCceEEEEEehh
Confidence 1110 0 0 0011223333444456798887654
No 74
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.47 E-value=2.2e-13 Score=120.99 Aligned_cols=114 Identities=19% Similarity=0.260 Sum_probs=86.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
+..+.+.|.++++ ++.+|||+|||+|+++..|+++|+ .|+|+|+|..|+..++-....
T Consensus 29 ~~~~~~~l~~~~~-----~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---------------- 87 (215)
T 2pxx_A 29 FSSFRALLEPELR-----PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---------------- 87 (215)
T ss_dssp HHHHHHHHGGGCC-----TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT----------------
T ss_pred HHHHHHHHHHhcC-----CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc----------------
Confidence 4456777776653 567999999999999999999998 899999999999876521100
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC---------------ChhhHH
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---------------TAHNIV 314 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID---------------ta~Ni~ 314 (397)
..++.+..+|+.++- ...++||+|++...++ ...++.
T Consensus 88 -------------------------~~~i~~~~~d~~~~~---~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (215)
T 2pxx_A 88 -------------------------VPQLRWETMDVRKLD---FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVD 139 (215)
T ss_dssp -------------------------CTTCEEEECCTTSCC---SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHH
T ss_pred -------------------------CCCcEEEEcchhcCC---CCCCcccEEEECcchhhhccccccccccccchhHHHH
Confidence 012677888987752 2357899999865332 134678
Q ss_pred HHHHHHHHhccCCcEEEEe
Q 015966 315 EYIEIISRILKDGGVWINL 333 (397)
Q Consensus 315 ~yi~~I~~~LKPGG~wIN~ 333 (397)
.+++.++++|||||++|-.
T Consensus 140 ~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 140 QVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhCcCCCEEEEE
Confidence 9999999999999999953
No 75
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.47 E-value=1.5e-12 Score=116.64 Aligned_cols=123 Identities=17% Similarity=0.002 Sum_probs=93.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..+|++| ..|+|+|+|..|+..++-.+... +
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 88 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF--------------------------V----- 88 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH--------------------------T-----
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh--------------------------C-----
Confidence 56799999999999999999998 89999999999998776322110 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCC
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~ 346 (397)
. .++.++.+|+.+... ..+.||+|+....+. ++.++++.+.++|||||+++-..+.
T Consensus 89 -------~-~~v~~~~~d~~~~~~---~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~---------- 144 (204)
T 3e05_A 89 -------A-RNVTLVEAFAPEGLD---DLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT---------- 144 (204)
T ss_dssp -------C-TTEEEEECCTTTTCT---TSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB----------
T ss_pred -------C-CcEEEEeCChhhhhh---cCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc----------
Confidence 0 136788899876543 136799998765443 5779999999999999999953221
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 347 EDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 347 ~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
.-+.+++.+++++.||++..
T Consensus 145 ------~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 145 ------LDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp ------HHHHHHHHHHHHHTTCEEEE
T ss_pred ------cccHHHHHHHHHHCCCceeE
Confidence 12567889999999995544
No 76
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.46 E-value=2.3e-13 Score=122.86 Aligned_cols=148 Identities=9% Similarity=0.023 Sum_probs=93.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHH-HHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMIC-SSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~-s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|+++..||++ |..|+|+|+|..||.. ++...+... ...
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~-------------------------~~~-- 79 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPA-------------------------KGG-- 79 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGG-------------------------GTC--
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhh-------------------------hcC--
Confidence 5679999999999999999999 7899999999999973 332111100 000
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC-----ChhhHHHHHHHHHHhccCCcEEEE-ecCCcch
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID-----TAHNIVEYIEIISRILKDGGVWIN-LGPLLYH 339 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID-----ta~Ni~~yi~~I~~~LKPGG~wIN-~GPLlYh 339 (397)
..++.++.+|+.++. ...+. |.|+..+-.. ..++...+++.++++|||||+++- ++...|.
T Consensus 80 ---------~~~v~~~~~d~~~l~---~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 146 (218)
T 3mq2_A 80 ---------LPNLLYLWATAERLP---PLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWR 146 (218)
T ss_dssp ---------CTTEEEEECCSTTCC---SCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBT
T ss_pred ---------CCceEEEecchhhCC---CCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccc
Confidence 013788999988753 22455 7776433110 111226889999999999999984 3322221
Q ss_pred hhh-ccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 340 FAD-LYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 340 ~~d-~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
... ..+..+........++++.++.++||+++..+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 147 PSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp TBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccccccCCccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 100 1111111111223566888999999999986644
No 77
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.45 E-value=1e-13 Score=128.85 Aligned_cols=153 Identities=16% Similarity=0.019 Sum_probs=99.2
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
|+.+.+.+..+ +++.+||++|||+|..+..||+. +-.|+|+|+|..|+..|+-... .
T Consensus 48 ~~m~~~a~~~~----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~---~--------------- 105 (236)
T 3orh_A 48 PYMHALAAAAS----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAP---R--------------- 105 (236)
T ss_dssp HHHHHHHHHHT----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGG---G---------------
T ss_pred HHHHHHHHhhc----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHh---h---------------
Confidence 56666666554 36789999999999999999987 4689999999999987763211 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEE-----eeccCChhhHHHHHHHHHHhccC
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT-----CFFIDTAHNIVEYIEIISRILKD 326 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT-----~FFIDta~Ni~~yi~~I~~~LKP 326 (397)
.+.++.++.||..++.. +..+++||+|+. .+-+....+...+++.++++|||
T Consensus 106 ----------------------~~~~~~~~~~~a~~~~~-~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkP 162 (236)
T 3orh_A 106 ----------------------QTHKVIPLKGLWEDVAP-TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp ----------------------CSSEEEEEESCHHHHGG-GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred ----------------------CCCceEEEeehHHhhcc-cccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCC
Confidence 01125677788766432 234678999863 12244556788999999999999
Q ss_pred CcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 327 GG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
||+|+-+...... +......+ .......+.+...|.++||+.+.
T Consensus 163 GG~l~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 163 GGVLTYCNLTSWG-ELMKSKYS-DITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp EEEEEECCHHHHH-HHTTTTCS-CHHHHHHHHTHHHHHHHTCCGGG
T ss_pred CCEEEEEecCCch-hhhhhhhh-hhhhhhHHHHHHHHHHcCCeEEE
Confidence 9999853221111 00000000 01223456666677788998543
No 78
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.45 E-value=5.6e-13 Score=124.20 Aligned_cols=175 Identities=18% Similarity=0.102 Sum_probs=113.4
Q ss_pred chhhHHHHHHHHHHhcccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHH
Q 015966 143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYY 222 (397)
Q Consensus 143 ~d~dkv~stL~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ 222 (397)
.+....-..+...+..|..... ....+..+.+.|.+.++ ++.+|||+|||+|+++..|+++|+.|+|+|+|..
T Consensus 15 ~~~~~~~~~~a~~Yd~~~~~~~--~~~~~~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~ 87 (260)
T 2avn_A 15 LRSWEFYDRIARAYDSMYETPK--WKLYHRLIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKE 87 (260)
T ss_dssp CCHHHHHHHHHHHHGGGGCSHH--HHHHHHHHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHH
T ss_pred hhhcchhhHHHHHHHHhccccc--hhHHHHHHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHH
Confidence 4445555566666666653211 12234456677777664 4569999999999999999999999999999999
Q ss_pred HHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEE
Q 015966 223 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVV 302 (397)
Q Consensus 223 ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~Vv 302 (397)
|+..++-... . .+..+|+.++- ...++||+|+
T Consensus 88 ~l~~a~~~~~-------------------------------------------~--~~~~~d~~~~~---~~~~~fD~v~ 119 (260)
T 2avn_A 88 MLEVAREKGV-------------------------------------------K--NVVEAKAEDLP---FPSGAFEAVL 119 (260)
T ss_dssp HHHHHHHHTC-------------------------------------------S--CEEECCTTSCC---SCTTCEEEEE
T ss_pred HHHHHHhhcC-------------------------------------------C--CEEECcHHHCC---CCCCCEEEEE
Confidence 9976651100 0 14567776642 2357899999
Q ss_pred Eeec-cCChhhHHHHHHHHHHhccCCcEEEEecCCcch-hh-----hc---------cC-----CCCC--ccccCCHHHH
Q 015966 303 TCFF-IDTAHNIVEYIEIISRILKDGGVWINLGPLLYH-FA-----DL---------YG-----QEDE--MSIELSLEDV 359 (397)
Q Consensus 303 T~FF-IDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh-~~-----d~---------~g-----~~~~--~~ieLS~EEl 359 (397)
+... +....+....++.++++|||||++|-..|..+. .. .. .+ ..+. ....++.+|+
T Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (260)
T 2avn_A 120 ALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDL 199 (260)
T ss_dssp ECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGG
T ss_pred EcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHH
Confidence 8642 222234779999999999999999953332220 00 00 00 0000 0014788999
Q ss_pred HHHHHhCCCEEEEEee
Q 015966 360 KRVALHYGFEFEKEKT 375 (397)
Q Consensus 360 ~~ll~~~GFeii~e~~ 375 (397)
+++ +||++++...
T Consensus 200 ~~l---aGf~~~~~~~ 212 (260)
T 2avn_A 200 DSL---EGFETVDIRG 212 (260)
T ss_dssp SSC---TTEEEEEEEE
T ss_pred HHh---cCceEEEEEC
Confidence 888 8999988653
No 79
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.45 E-value=1.2e-12 Score=125.20 Aligned_cols=165 Identities=15% Similarity=0.090 Sum_probs=106.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
.+++.|....+ ++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++-........
T Consensus 23 ~~~~~l~~~~~-----~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-------------- 83 (313)
T 3bgv_A 23 EFLEKVRQKKK-----RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNR-------------- 83 (313)
T ss_dssp HHHHHHHHTC-------CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSS--------------
T ss_pred HHHHHhhhccC-----CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhc--------------
Confidence 35555544332 4679999999999999999976 568999999999998776332110000
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEeccccccc---CCCCCCCCccEEEEeecc----CChhhHHHHHHHHHHhc
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVY---SDPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRIL 324 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely---~~~~~~~~fD~VvT~FFI----Dta~Ni~~yi~~I~~~L 324 (397)
... ....++.++.+|+.++. ..+...++||+|++.+.+ .+.+++...++.++++|
T Consensus 84 --~~~----------------~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 145 (313)
T 3bgv_A 84 --RDS----------------EYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERL 145 (313)
T ss_dssp --SCC-----------------CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTE
T ss_pred --ccc----------------cccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHh
Confidence 000 00123788899987752 111124689999998755 45567789999999999
Q ss_pred cCCcEEEEecCC-------------------cch--hhhc--cC---C---------CCCccccCCHHHHHHHHHhCCCE
Q 015966 325 KDGGVWINLGPL-------------------LYH--FADL--YG---Q---------EDEMSIELSLEDVKRVALHYGFE 369 (397)
Q Consensus 325 KPGG~wIN~GPL-------------------lYh--~~d~--~g---~---------~~~~~ieLS~EEl~~ll~~~GFe 369 (397)
||||++|-.-|- .|. |.+. .+ . .+...+.++.+++.+++++.||+
T Consensus 146 kpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~ 225 (313)
T 3bgv_A 146 SPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMK 225 (313)
T ss_dssp EEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEE
T ss_pred CCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcE
Confidence 999999942221 111 1110 00 0 00012337899999999999999
Q ss_pred EEEEe
Q 015966 370 FEKEK 374 (397)
Q Consensus 370 ii~e~ 374 (397)
++...
T Consensus 226 ~v~~~ 230 (313)
T 3bgv_A 226 LVYKK 230 (313)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99854
No 80
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.44 E-value=7.4e-13 Score=125.79 Aligned_cols=190 Identities=15% Similarity=0.202 Sum_probs=110.7
Q ss_pred chhhHHHHHHHHHHhcccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHH----HHHc--CCeE--
Q 015966 143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALE----ISHL--GFIS-- 214 (397)
Q Consensus 143 ~d~dkv~stL~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~e----LA~~--Gf~V-- 214 (397)
.|.+........+.+. +.. ...+...+...+..+...++. ..++.+|||+|||+|.++.. ++.+ +..|
T Consensus 10 ~d~~~y~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~~~~--~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~ 85 (292)
T 2aot_A 10 SDHGKYVESFRRFLNH-STE-HQCMQEFMDKKLPGIIGRIGD--TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINN 85 (292)
T ss_dssp GCHHHHHHHHHHHHTT-BSH-HHHHHHHHHHTHHHHSSSTTT--TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEE
T ss_pred ccHHHHHHHHHHHHHh-ccH-HHHHHHHHHHhchhHHhhccC--CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeE
Confidence 5677777777766665 222 122222222222222222211 12567999999999976653 3443 3333
Q ss_pred EEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccC---C
Q 015966 215 QGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS---D 291 (397)
Q Consensus 215 ~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~---~ 291 (397)
+|+|.|..||..++-.+... . .+..+ .+.+..++..++.. .
T Consensus 86 ~~vD~S~~ml~~a~~~~~~~---~-------------------~~~~v--------------~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 86 EVVEPSAEQIAKYKELVAKT---S-------------------NLENV--------------KFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp EEECSCHHHHHHHHHHHHTC---S-------------------SCTTE--------------EEEEECSCHHHHHHHHHT
T ss_pred EEEeCCHHHHHHHHHHHHhc---c-------------------CCCcc--------------eEEEEecchhhhhhhhcc
Confidence 99999999998776322100 0 00001 13445556544320 0
Q ss_pred CCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe--cC-C----cchh-hhccCCCCCccccCCHHHHHHHH
Q 015966 292 PSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL--GP-L----LYHF-ADLYGQEDEMSIELSLEDVKRVA 363 (397)
Q Consensus 292 ~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~--GP-L----lYh~-~d~~g~~~~~~ieLS~EEl~~ll 363 (397)
+..+++||+|++.+-+...+|+...|+.++++|||||+++-. .+ - +|.. ....+ .+.....++.+++.+++
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 208 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFP-QDDLCQYITSDDLTQML 208 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSC-CCTTCCCCCHHHHHHHH
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhcc-CCCcccCCCHHHHHHHH
Confidence 112578999998876666667889999999999999999952 11 0 1111 01011 11112347999999999
Q ss_pred HhCCCEEEEE
Q 015966 364 LHYGFEFEKE 373 (397)
Q Consensus 364 ~~~GFeii~e 373 (397)
+++||+++..
T Consensus 209 ~~aGf~~~~~ 218 (292)
T 2aot_A 209 DNLGLKYECY 218 (292)
T ss_dssp HHHTCCEEEE
T ss_pred HHCCCceEEE
Confidence 9999998874
No 81
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.44 E-value=1.3e-12 Score=122.78 Aligned_cols=133 Identities=20% Similarity=0.192 Sum_probs=100.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
+++.|.+.+. ++.+|||+|||+|.++..++++|..|+|+|+|..|+..++-.... +
T Consensus 110 ~~~~l~~~~~-----~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~----~--------------- 165 (254)
T 2nxc_A 110 ALKALARHLR-----PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKR----N--------------- 165 (254)
T ss_dssp HHHHHHHHCC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHH----T---------------
T ss_pred HHHHHHHhcC-----CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHH----c---------------
Confidence 5566665542 467999999999999999999999999999999999877632110 0
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~ 333 (397)
.+ . +.+..+|+.+... .++||+|+++.. .+.+..+++.+.++|||||++|-.
T Consensus 166 -------~~-------------~-v~~~~~d~~~~~~----~~~fD~Vv~n~~---~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 166 -------GV-------------R-PRFLEGSLEAALP----FGPFDLLVANLY---AELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp -------TC-------------C-CEEEESCHHHHGG----GCCEEEEEEECC---HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CC-------------c-EEEEECChhhcCc----CCCCCEEEECCc---HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 00 0 4667888876432 368999998653 344678999999999999999964
Q ss_pred cCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 334 GPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 334 GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
|.+ .-+.+++++++++.||++++..
T Consensus 218 ~~~----------------~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 218 GIL----------------KDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp EEE----------------GGGHHHHHHHHHHTTCEEEEEE
T ss_pred eec----------------cCCHHHHHHHHHHCCCEEEEEe
Confidence 432 2247899999999999998743
No 82
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.44 E-value=1.4e-12 Score=120.46 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=94.1
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~--~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||. .|..|+|+|+|..|+..++...... +
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 118 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL--------------------------Q----- 118 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------T-----
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------C-----
Confidence 567999999999999999994 5789999999999998776332110 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe-cCCcchhhhccC
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL-GPLLYHFADLYG 345 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~-GPLlYh~~d~~g 345 (397)
. .++.++.+|+.++...+...++||+|++..+ .++..+++.++++|||||++|-. |+.
T Consensus 119 -------~-~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~g~~--------- 177 (240)
T 1xdz_A 119 -------L-ENTTFCHDRAETFGQRKDVRESYDIVTARAV----ARLSVLSELCLPLVKKNGLFVALKAAS--------- 177 (240)
T ss_dssp -------C-SSEEEEESCHHHHTTCTTTTTCEEEEEEECC----SCHHHHHHHHGGGEEEEEEEEEEECC----------
T ss_pred -------C-CCEEEEeccHHHhcccccccCCccEEEEecc----CCHHHHHHHHHHhcCCCCEEEEEeCCC---------
Confidence 0 1267889998775321112478999998664 34779999999999999999842 221
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
..-..+++.+.+++.||+++....
T Consensus 178 ------~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 178 ------AEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp ------CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ------chHHHHHHHHHHHHcCCeEeEEEE
Confidence 111246788889999999987553
No 83
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.44 E-value=2.6e-12 Score=116.82 Aligned_cols=124 Identities=11% Similarity=-0.045 Sum_probs=93.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..+|++|..|+|+|+|..|+..|+-.+...
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 100 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTY---------------------------------- 100 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999998776322100
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~ 348 (397)
....++.++.+|+.+... ..+.||+|+...-+ +.. +++.++++|||||++|-..+.
T Consensus 101 ----g~~~~v~~~~~d~~~~~~---~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~------------ 156 (204)
T 3njr_A 101 ----GLSPRMRAVQGTAPAALA---DLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVT------------ 156 (204)
T ss_dssp ----TCTTTEEEEESCTTGGGT---TSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECS------------
T ss_pred ----CCCCCEEEEeCchhhhcc---cCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecC------------
Confidence 011237889999988432 13579999865422 455 999999999999999952221
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 349 EMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 349 ~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.-+.+++.+++++.||++....
T Consensus 157 ----~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 157 ----LESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp ----HHHHHHHHHHHHHHCSEEEEEE
T ss_pred ----cccHHHHHHHHHhCCCcEEEEE
Confidence 1245788888999999988743
No 84
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.43 E-value=2e-12 Score=116.25 Aligned_cols=141 Identities=19% Similarity=0.184 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHhcccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 146 DKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 146 dkv~stL~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.........+.|... ....+++.|... .++.+|||+|||+|.++..|+ ..|+|+|+|..
T Consensus 37 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~------~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~--- 97 (215)
T 2zfu_A 37 LLYHRGFQSQVKKWPLQ-------PVDRIARDLRQR------PASLVVADFGCGDCRLASSIR---NPVHCFDLASL--- 97 (215)
T ss_dssp HHHHHHHHHHHTTSSSC-------HHHHHHHHHHTS------CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS---
T ss_pred HHHHHHHHhhhcccchh-------HHHHHHHHHhcc------CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC---
Confidence 34444444445556532 112355555532 245789999999999998884 78999999974
Q ss_pred HHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee
Q 015966 226 CSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF 305 (397)
Q Consensus 226 ~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F 305 (397)
+ +.+..+|+.++. ...++||+|++.+
T Consensus 98 --~-------------------------------------------------~~~~~~d~~~~~---~~~~~fD~v~~~~ 123 (215)
T 2zfu_A 98 --D-------------------------------------------------PRVTVCDMAQVP---LEDESVDVAVFCL 123 (215)
T ss_dssp --S-------------------------------------------------TTEEESCTTSCS---CCTTCEEEEEEES
T ss_pred --C-------------------------------------------------ceEEEeccccCC---CCCCCEeEEEEeh
Confidence 0 344667776642 2357899999887
Q ss_pred ccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 306 FIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 306 FIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.+.. .+...+++.++++|||||++|-..+. ....+.+++.+++++.||+++...
T Consensus 124 ~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~--------------~~~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 124 SLMG-TNIRDFLEEANRVLKPGGLLKVAEVS--------------SRFEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp CCCS-SCHHHHHHHHHHHEEEEEEEEEEECG--------------GGCSCHHHHHHHHHHTTEEEEEEE
T ss_pred hccc-cCHHHHHHHHHHhCCCCeEEEEEEcC--------------CCCCCHHHHHHHHHHCCCEEEEEe
Confidence 6654 67889999999999999999953211 112389999999999999998754
No 85
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.42 E-value=8.7e-13 Score=125.29 Aligned_cols=152 Identities=12% Similarity=0.111 Sum_probs=104.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHH---HcCCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccc
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEIS---HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA---~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
..+.+.|.++.+. ++.+|||+|||+|+++..|| ..+..|+|+|+|..|+..++-.+...
T Consensus 23 ~~~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------- 84 (299)
T 3g5t_A 23 SDFYKMIDEYHDG----ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-------------- 84 (299)
T ss_dssp HHHHHHHHHHCCS----CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHhcC----CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc--------------
Confidence 4466777776542 57899999999999999999 56889999999999998776332110
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCC------CCccEEEEeeccCChhhHHHHHHHHHH
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQV------GAWDAVVTCFFIDTAHNIVEYIEIISR 322 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~------~~fD~VvT~FFIDta~Ni~~yi~~I~~ 322 (397)
+ ....++.++.+|+.++-. .. ++||+|++...+... +...+++.+++
T Consensus 85 ----------------~-------~~~~~v~~~~~d~~~~~~---~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~ 137 (299)
T 3g5t_A 85 ----------------P-------DTYKNVSFKISSSDDFKF---LGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYA 137 (299)
T ss_dssp ----------------C--------CCTTEEEEECCTTCCGG---GCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHH
T ss_pred ----------------c-------CCCCceEEEEcCHHhCCc---cccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHH
Confidence 0 001237888999877532 23 789999988655544 78899999999
Q ss_pred hccCCcEEEE--e-cCCcchhhhc--------cCCCCCc-ccc-CCHHHHHHHHHhCCC
Q 015966 323 ILKDGGVWIN--L-GPLLYHFADL--------YGQEDEM-SIE-LSLEDVKRVALHYGF 368 (397)
Q Consensus 323 ~LKPGG~wIN--~-GPLlYh~~d~--------~g~~~~~-~ie-LS~EEl~~ll~~~GF 368 (397)
+|||||+++- + .|....+... ++..... .+. ...+.++++++.+||
T Consensus 138 ~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 138 NLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp HEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCC
T ss_pred hcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhccCC
Confidence 9999999974 1 1221110000 1100111 222 567888999999999
No 86
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.42 E-value=2.6e-12 Score=123.20 Aligned_cols=145 Identities=13% Similarity=0.154 Sum_probs=100.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++..|+++ +..++|+|+| .|+..++-.+...
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~-------------------------------- 211 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ-------------------------------- 211 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--------------------------------
Confidence 5679999999999999999998 7899999999 9998776322100
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC--hhhHHHHHHHHHHhccCCcEEEEecCCcch-----
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPLLYH----- 339 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh----- 339 (397)
....++.+..+|+.+. .. .+.||+|++...+.. .++..+.++.++++|||||+++-..+..-.
T Consensus 212 ------~~~~~v~~~~~d~~~~-~~---~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 281 (335)
T 2r3s_A 212 ------GVASRYHTIAGSAFEV-DY---GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP 281 (335)
T ss_dssp ------TCGGGEEEEESCTTTS-CC---CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCS
T ss_pred ------CCCcceEEEecccccC-CC---CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCc
Confidence 0112378899998774 21 234999998765432 356789999999999999977743222100
Q ss_pred -hhhccC----CCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 340 -FADLYG----QEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 340 -~~d~~g----~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
+....+ .......+++.+|++++++++||++++....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 282 PDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHSL 323 (335)
T ss_dssp HHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEECC
T ss_pred hHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEEC
Confidence 000000 0000134689999999999999999886533
No 87
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.42 E-value=3.3e-12 Score=114.23 Aligned_cols=127 Identities=17% Similarity=0.065 Sum_probs=91.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|+++..| |+ .|+|+|+|..|+..++-..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------------------------------------ 76 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------------------------------------ 76 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------------------------------------
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------------------------------------
Confidence 4679999999999999888 88 9999999999997665110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcch-hh----h
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYH-FA----D 342 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh-~~----d 342 (397)
.++.++.+|+.++. ..+++||+|++...+...++....++.++++|||||++|-..|.... +. .
T Consensus 77 --------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~ 145 (211)
T 2gs9_A 77 --------PEATWVRAWGEALP---FPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSPWAALYRR 145 (211)
T ss_dssp --------TTSEEECCCTTSCC---SCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHH
T ss_pred --------CCcEEEEcccccCC---CCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHH
Confidence 01566778877642 23578999999877776667889999999999999999854332111 10 0
Q ss_pred --ccCCCC-CccccCCHHHHHHHHHhCC
Q 015966 343 --LYGQED-EMSIELSLEDVKRVALHYG 367 (397)
Q Consensus 343 --~~g~~~-~~~ieLS~EEl~~ll~~~G 367 (397)
..+... .....+|.++++++++ |
T Consensus 146 ~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 146 LGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp HHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred HhhccCccccccccCCHHHHHHHhc--C
Confidence 011111 1123489999999998 8
No 88
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.42 E-value=2e-12 Score=121.86 Aligned_cols=184 Identities=13% Similarity=0.141 Sum_probs=115.4
Q ss_pred hhHHHHHHHHHHhcccccCh----hHHhhch-HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEE
Q 015966 145 VDKVRCIIRNIVRDWAAEGK----TERDQCY-KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGN 217 (397)
Q Consensus 145 ~dkv~stL~q~~RDWS~eG~----~ER~~~y-~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~Gn 217 (397)
.+++. .+.++..+|...-. .+.+..| ..+++.+.-..+ ....++.+|||+|||+|.++..||.. +..|+|+
T Consensus 33 ~~~~~-~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~-~~~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~v 110 (249)
T 3g89_A 33 LEAFS-RLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRL-PLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLV 110 (249)
T ss_dssp HHHHH-HHHHHHHHC----------CHHHHHHHHHHHHHGGGGS-SCCCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEE
T ss_pred HHHHH-HHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcc-cccCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEE
Confidence 34443 56667778865211 1112222 234444432222 11235779999999999999999987 6799999
Q ss_pred eCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCC
Q 015966 218 EFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGA 297 (397)
Q Consensus 218 D~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~ 297 (397)
|+|..|+..++...... + . .++.++.+|+.++...+...++
T Consensus 111 D~s~~~~~~a~~~~~~~--------------------------~------------l-~~v~~~~~d~~~~~~~~~~~~~ 151 (249)
T 3g89_A 111 DATRKKVAFVERAIEVL--------------------------G------------L-KGARALWGRAEVLAREAGHREA 151 (249)
T ss_dssp ESCHHHHHHHHHHHHHH--------------------------T------------C-SSEEEEECCHHHHTTSTTTTTC
T ss_pred ECCHHHHHHHHHHHHHh--------------------------C------------C-CceEEEECcHHHhhcccccCCC
Confidence 99999998877432110 0 0 1267889998775321112478
Q ss_pred ccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE-ecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 298 WDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 298 fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN-~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
||+|++..+ .++..+++.+.++|||||+++- .|+. .+-..+++...+++.||++++....
T Consensus 152 fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~---------------~~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 152 YARAVARAV----APLCVLSELLLPFLEVGGAAVAMKGPR---------------VEEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp EEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEECSC---------------CHHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred ceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCC---------------cHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 999998654 2467899999999999999985 2321 1112346777788899999886544
Q ss_pred CCCCCCCccccc
Q 015966 377 ETTYTTNPRSMM 388 (397)
Q Consensus 377 ~~~Y~~d~~sm~ 388 (397)
..+.....+.+.
T Consensus 213 ~~p~~~~~R~l~ 224 (249)
T 3g89_A 213 QLPLSGEARHLV 224 (249)
T ss_dssp ECTTTCCEEEEE
T ss_pred eCCCCCCcEEEE
Confidence 445444455444
No 89
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.42 E-value=3.4e-12 Score=118.70 Aligned_cols=149 Identities=9% Similarity=0.026 Sum_probs=97.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHH------HHHHHHhhhhcccccCccccccccccccCCCCcccCc
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYY------MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQL 259 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~------ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~ql 259 (397)
++.+|||+|||+|.++..++++ | ..|+|+|+|.. |+..++..+...
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~------------------------- 97 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG------------------------- 97 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-------------------------
Confidence 5679999999999999999998 4 79999999997 887665322100
Q ss_pred cccccCCCCCCCCCCCCcceeEecc-cccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEec--C-
Q 015966 260 RPVSIPDIHPASAGITEGFSMCGGD-FVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG--P- 335 (397)
Q Consensus 260 r~v~iPDv~p~~~~~~~~ls~~~GD-F~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~G--P- 335 (397)
....++.+..+| +.... .+...++||+|++...+....+...+++.+.++|+|||+++-.. +
T Consensus 98 -------------~~~~~v~~~~~d~~~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 98 -------------PLGDRLTVHFNTNLSDDL-GPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp -------------TTGGGEEEECSCCTTTCC-GGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred -------------CCCCceEEEECChhhhcc-CCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 011236777887 43321 12235789999987644433444567788888888899998521 1
Q ss_pred ----Ccc-h---------hhhc-cCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 336 ----LLY-H---------FADL-YGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 336 ----LlY-h---------~~d~-~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
..+ + +... ..........+|.++++++++++||++++...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 164 PTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred CCchhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 000 0 0000 001111123579999999999999999986644
No 90
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=2.4e-12 Score=111.48 Aligned_cols=124 Identities=11% Similarity=-0.035 Sum_probs=90.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..+|++ +..|+|+|+|..|+..++..+...
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 72 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL-------------------------------- 72 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--------------------------------
Confidence 5679999999999999999998 789999999999998776332110
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCC
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~ 346 (397)
....++ ++.+|..+... ...++||+|++.+.+.. ..+++.++++|||||++|-..+.
T Consensus 73 ------~~~~~~-~~~~d~~~~~~--~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~---------- 129 (178)
T 3hm2_A 73 ------GVSDRI-AVQQGAPRAFD--DVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVT---------- 129 (178)
T ss_dssp ------TCTTSE-EEECCTTGGGG--GCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECS----------
T ss_pred ------CCCCCE-EEecchHhhhh--ccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeec----------
Confidence 001135 66778765432 22378999998776654 57899999999999999842221
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 347 EDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 347 ~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
.-+.+++..++++.|+++...
T Consensus 130 ------~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 130 ------VESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp ------HHHHHHHHHHHHHHCCEEEEE
T ss_pred ------cccHHHHHHHHHHcCCeeEEE
Confidence 123567788888999988764
No 91
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.41 E-value=5.1e-13 Score=123.99 Aligned_cols=154 Identities=12% Similarity=0.065 Sum_probs=89.3
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCC-HHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFS-YYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~--~Gf~V~GnD~S-~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|+++..||+ .|..|+|+|+| ..||..|.+...+... ..+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~-------------------------~~~- 77 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSK-------------------------GGL- 77 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGG-------------------------TCC-
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHH-------------------------cCC-
Confidence 567999999999999999994 47789999999 8887765322211110 000
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC-----hhhHHHHHHHHHHhccCCcEEEEecCCcchh
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-----AHNIVEYIEIISRILKDGGVWINLGPLLYHF 340 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt-----a~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~ 340 (397)
.++.++.+|+.++.. ...+.+|+|+..|.... ..+..++|+.++++|||||+++-.-.+--++
T Consensus 78 ----------~~v~~~~~d~~~l~~--~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~ 145 (225)
T 3p2e_A 78 ----------SNVVFVIAAAESLPF--ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY 145 (225)
T ss_dssp ----------SSEEEECCBTTBCCG--GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--
T ss_pred ----------CCeEEEEcCHHHhhh--hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 136788899877621 11244555544442111 0112468999999999999998511111111
Q ss_pred hhc---cCCCCCcccc-CCHHHHHHHHHhCCCEEEEEeecCCCC
Q 015966 341 ADL---YGQEDEMSIE-LSLEDVKRVALHYGFEFEKEKTIETTY 380 (397)
Q Consensus 341 ~d~---~g~~~~~~ie-LS~EEl~~ll~~~GFeii~e~~i~~~Y 380 (397)
+.. ....+...-. +..+|+.+++++.||+++..+.....|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~~~~~~~ 189 (225)
T 3p2e_A 146 EEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVKELDNEY 189 (225)
T ss_dssp ------------CCHHHHHSHHHHHHHHHHTCEEEEEEEECHHH
T ss_pred hhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeeeecCHHH
Confidence 110 0001100101 122459999999999999866443333
No 92
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.40 E-value=1.4e-12 Score=129.80 Aligned_cols=113 Identities=16% Similarity=0.126 Sum_probs=86.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
.+.+.|.+.... .++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..++-.+...
T Consensus 50 ~~~~~i~~~~~~---~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~----------------- 108 (376)
T 3r0q_C 50 AYFNAVFQNKHH---FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKAN----------------- 108 (376)
T ss_dssp HHHHHHHTTTTT---TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHT-----------------
T ss_pred HHHHHHHhcccc---CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHc-----------------
Confidence 344555444322 2578999999999999999999999 99999999 9998776433210
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe---eccCChhhHHHHHHHHHHhccCCc
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGG 328 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yi~~I~~~LKPGG 328 (397)
....++.++.+|+.++.. .++||+|++. +|+.....+..+++.++++|||||
T Consensus 109 ---------------------~~~~~v~~~~~d~~~~~~----~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG 163 (376)
T 3r0q_C 109 ---------------------NLDHIVEVIEGSVEDISL----PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTG 163 (376)
T ss_dssp ---------------------TCTTTEEEEESCGGGCCC----SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEE
T ss_pred ---------------------CCCCeEEEEECchhhcCc----CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCe
Confidence 011237889999988632 2789999984 467666668889999999999999
Q ss_pred EEE
Q 015966 329 VWI 331 (397)
Q Consensus 329 ~wI 331 (397)
++|
T Consensus 164 ~li 166 (376)
T 3r0q_C 164 VMY 166 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 93
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.40 E-value=2.3e-12 Score=116.97 Aligned_cols=129 Identities=15% Similarity=0.151 Sum_probs=93.6
Q ss_pred CCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+||| +|.++..+|++ +..|+|+|+|..|+..++..+... +
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 103 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN--------------------------N----- 103 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT--------------------------T-----
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh--------------------------C-----
Confidence 56899999999 99999999999 899999999999998776332110 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccC-----------------ChhhHHHHHHHHHHhccCC
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID-----------------TAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFID-----------------ta~Ni~~yi~~I~~~LKPG 327 (397)
.++.++.+|+..+... ..++||+|++. |+-. ....+.++++.+.++||||
T Consensus 104 ---------~~v~~~~~d~~~~~~~--~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 172 (230)
T 3evz_A 104 ---------SNVRLVKSNGGIIKGV--VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG 172 (230)
T ss_dssp ---------CCCEEEECSSCSSTTT--CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE
T ss_pred ---------CCcEEEeCCchhhhhc--ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC
Confidence 0267788886543222 24789999976 2211 1122468999999999999
Q ss_pred cEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 328 G~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
|+++-.-|-. .-..+++.+++++.||++...+
T Consensus 173 G~l~~~~~~~---------------~~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 173 GKVALYLPDK---------------EKLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp EEEEEEEESC---------------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEeccc---------------HhHHHHHHHHHHHcCCceEEEE
Confidence 9999532210 1245889999999999887754
No 94
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.40 E-value=8.3e-12 Score=114.51 Aligned_cols=136 Identities=14% Similarity=0.043 Sum_probs=87.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+.... +.+...
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~---~~a~~~----------------------------- 104 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL---ELVRER----------------------------- 104 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH---HHHHHC-----------------------------
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHH---HHHhcC-----------------------------
Confidence 67799999999999999999874 68999999999874222 111100
Q ss_pred CCCCCCCCCCcceeEecccccccC-CCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~-~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
.++.++.+|+.+... .+. .++||+|++.. .+ ......+++.++++|||||+++-. +.-...
T Consensus 105 ---------~~v~~~~~d~~~~~~~~~~-~~~fD~V~~~~-~~-~~~~~~~l~~~~r~LkpgG~l~i~----~~~~~~-- 166 (210)
T 1nt2_A 105 ---------NNIIPLLFDASKPWKYSGI-VEKVDLIYQDI-AQ-KNQIEILKANAEFFLKEKGEVVIM----VKARSI-- 166 (210)
T ss_dssp ---------SSEEEECSCTTCGGGTTTT-CCCEEEEEECC-CS-TTHHHHHHHHHHHHEEEEEEEEEE----EEHHHH--
T ss_pred ---------CCeEEEEcCCCCchhhccc-ccceeEEEEec-cC-hhHHHHHHHHHHHHhCCCCEEEEE----EecCCc--
Confidence 014456677665311 111 37899998763 22 233445699999999999999953 111110
Q ss_pred CCCCccccCCHHHHH--HH--HHhCCCEEEEEeecCCCCC
Q 015966 346 QEDEMSIELSLEDVK--RV--ALHYGFEFEKEKTIETTYT 381 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~--~l--l~~~GFeii~e~~i~~~Y~ 381 (397)
....+.+++. .+ +++. |++++.... .+|.
T Consensus 167 -----~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~-~p~~ 199 (210)
T 1nt2_A 167 -----DSTAEPEEVFKSVLKEMEGD-FKIVKHGSL-MPYH 199 (210)
T ss_dssp -----CTTSCHHHHHHHHHHHHHTT-SEEEEEEEC-TTTC
T ss_pred -----cccCCHHHHHHHHHHHHHhh-cEEeeeecC-CCCC
Confidence 1234556653 22 6777 999987644 3454
No 95
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=5.5e-12 Score=111.21 Aligned_cols=116 Identities=13% Similarity=0.052 Sum_probs=87.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..||++| .|+|+|+|..|+.. .
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~---------~-------------------------------- 60 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES---------H-------------------------------- 60 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT---------C--------------------------------
T ss_pred CCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc---------c--------------------------------
Confidence 45699999999999999999999 99999999999842 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEee-ccC--------ChhhHHHHHHHHHHhccCCcEEEEecCCcch
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID--------TAHNIVEYIEIISRILKDGGVWINLGPLLYH 339 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F-FID--------ta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh 339 (397)
.++.++.+|+.+... .++||+|+++. |.. ...+..+.++.+.+.| |||+++-..+
T Consensus 61 -------~~~~~~~~d~~~~~~----~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~---- 124 (170)
T 3q87_B 61 -------RGGNLVRADLLCSIN----QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI---- 124 (170)
T ss_dssp -------SSSCEEECSTTTTBC----GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE----
T ss_pred -------cCCeEEECChhhhcc----cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEe----
Confidence 125678899877432 47899999874 221 1123457888999999 9999984221
Q ss_pred hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 340 FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 340 ~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
-.-..+++++++++.||+.+...
T Consensus 125 ------------~~~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 125 ------------EANRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp ------------GGGCHHHHHHHHHHTTCEEEEEE
T ss_pred ------------cCCCHHHHHHHHHHCCCcEEEEE
Confidence 11357899999999999987743
No 96
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.38 E-value=3.2e-12 Score=113.35 Aligned_cols=115 Identities=16% Similarity=0.081 Sum_probs=84.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
+++.|....+ .++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+...
T Consensus 33 l~~~l~~~~~----~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 90 (189)
T 3p9n_A 33 LFNIVTARRD----LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL------------------ 90 (189)
T ss_dssp HHHHHHHHSC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHhccC----CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc------------------
Confidence 4455554432 1467999999999999999999987 6999999999998877322110
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee-ccCChhhHHHHHHHHHH--hccCCcE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTAHNIVEYIEIISR--ILKDGGV 329 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F-FIDta~Ni~~yi~~I~~--~LKPGG~ 329 (397)
. . .++.++.+|+.++... ...++||+|++.. |....+++.+.++.+.+ +|||||+
T Consensus 91 --------~------------~-~~v~~~~~d~~~~~~~-~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 91 --------G------------L-SGATLRRGAVAAVVAA-GTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp --------T------------C-SCEEEEESCHHHHHHH-CCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred --------C------------C-CceEEEEccHHHHHhh-ccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 0 0 1377899998875320 1247899999864 33334678899999999 9999999
Q ss_pred EEE
Q 015966 330 WIN 332 (397)
Q Consensus 330 wIN 332 (397)
+|-
T Consensus 149 l~~ 151 (189)
T 3p9n_A 149 AVV 151 (189)
T ss_dssp EEE
T ss_pred EEE
Confidence 994
No 97
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.38 E-value=6.8e-12 Score=115.16 Aligned_cols=136 Identities=16% Similarity=0.079 Sum_probs=91.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..++-.. ..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~---~~------------------------------ 120 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDAC---AE------------------------------ 120 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHT---TT------------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHh---hc------------------------------
Confidence 5679999999999999999998 5 68999999999997665211 00
Q ss_pred CCCCCCCCCCcceeEecccccccC-CCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~-~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
..++.++.+|+.+... .+.. +.||+|+.. +........+++.+.++|||||+++-. +.......
T Consensus 121 --------~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~----~~~~~~~~ 185 (230)
T 1fbn_A 121 --------RENIIPILGDANKPQEYANIV-EKVDVIYED--VAQPNQAEILIKNAKWFLKKGGYGMIA----IKARSIDV 185 (230)
T ss_dssp --------CTTEEEEECCTTCGGGGTTTS-CCEEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEE----EEGGGTCS
T ss_pred --------CCCeEEEECCCCCcccccccC-ccEEEEEEe--cCChhHHHHHHHHHHHhCCCCcEEEEE----EecCCCCC
Confidence 0126677888766211 1122 689999832 233333467899999999999999953 21111100
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
..+ ...+..+++. ++++.||++++...
T Consensus 186 ~~~--~~~~~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 186 TKD--PKEIFKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp SSC--HHHHHHHHHH-HHHHHTEEEEEEEE
T ss_pred CCC--HHHhhHHHHH-HHHHCCCEEEEEEc
Confidence 111 1134568888 88899999887553
No 98
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.38 E-value=4.3e-12 Score=110.10 Aligned_cols=124 Identities=19% Similarity=0.174 Sum_probs=92.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..+++.+..|+|+|+|..|+..++..+...
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~---------------------------------- 78 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH---------------------------------- 78 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999998776322100
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~ 348 (397)
....++.+..+|+.+... ..+.||+|++...+ +++..+++.+.++|||||+++-..+.
T Consensus 79 ----~~~~~~~~~~~d~~~~~~---~~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~------------ 136 (192)
T 1l3i_A 79 ----GLGDNVTLMEGDAPEALC---KIPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAIL------------ 136 (192)
T ss_dssp ----TCCTTEEEEESCHHHHHT---TSCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECB------------
T ss_pred ----CCCcceEEEecCHHHhcc---cCCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecC------------
Confidence 001236778889877322 12589999976544 35678999999999999999842211
Q ss_pred CccccCCHHHHHHHHHhCCCEEEE
Q 015966 349 EMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 349 ~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
.-+.+++.+++++.||++..
T Consensus 137 ----~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 137 ----LETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp ----HHHHHHHHHHHHHTTCCCEE
T ss_pred ----cchHHHHHHHHHHCCCceEE
Confidence 12357888899999996554
No 99
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.37 E-value=7.1e-12 Score=108.92 Aligned_cols=115 Identities=13% Similarity=0.060 Sum_probs=84.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
..+.|.+.++. .++.+|||+|||+|+++..++++|..|+|+|+|..|+..++..+...
T Consensus 40 ~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------------- 97 (194)
T 1dus_A 40 GTKILVENVVV---DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLN------------------- 97 (194)
T ss_dssp HHHHHHHHCCC---CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHccc---CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHc-------------------
Confidence 44445554442 25679999999999999999999999999999999998776332110
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC-ChhhHHHHHHHHHHhccCCcEEEE
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID-TAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID-ta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
. ++ ..++.+..+|+.+... .++||+|++..-+. ...++..+++.++++|||||+++-
T Consensus 98 -------~--~~---------~~~~~~~~~d~~~~~~----~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 98 -------N--LD---------NYDIRVVHSDLYENVK----DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp -------T--CT---------TSCEEEEECSTTTTCT----TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------C--CC---------ccceEEEECchhcccc----cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEE
Confidence 0 00 0026778889877432 47899999865333 356688999999999999999995
No 100
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.37 E-value=2.8e-12 Score=126.04 Aligned_cols=101 Identities=18% Similarity=0.220 Sum_probs=79.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|++|. .|+|+|+|. |+..|+-.+.. +
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~----~----------------------------- 109 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRL----N----------------------------- 109 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHH----c-----------------------------
Confidence 567999999999999999999997 899999996 98776633211 0
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
....++.++.+|+.++.. ..++||+|++.. ++....++..+++.+.++|||||++|
T Consensus 110 -----~~~~~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 110 -----KLEDTITLIKGKIEEVHL---PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -----TCTTTEEEEESCTTTSCC---SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCcEEEEEeeHHHhcC---CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 011237889999887632 247899999754 67666678889999999999999998
No 101
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.37 E-value=6.6e-12 Score=123.70 Aligned_cols=144 Identities=15% Similarity=0.173 Sum_probs=100.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
...+|||+|||+|.++..|+++ +..++|+|+ +.|+..|+-.+..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~--------------------------------- 224 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAG--------------------------------- 224 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTT---------------------------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHh---------------------------------
Confidence 4579999999999999999995 678999999 9998776622110
Q ss_pred CCCCCCCCCCcceeEeccccccc-CCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCc----ch
Q 015966 267 IHPASAGITEGFSMCGGDFVEVY-SDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLL----YH 339 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely-~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLl----Yh 339 (397)
.....++.+..|||.+.. .. .+.||+|+....+. ..++....|+.++++|||||++|-..+.. ..
T Consensus 225 -----~~~~~~v~~~~~d~~~~~~~~---p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~ 296 (363)
T 3dp7_A 225 -----LSGSERIHGHGANLLDRDVPF---PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYE 296 (363)
T ss_dssp -----CTTGGGEEEEECCCCSSSCCC---CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSH
T ss_pred -----cCcccceEEEEccccccCCCC---CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCcccc
Confidence 011234889999998742 11 26899999887665 44567889999999999999998532211 00
Q ss_pred ---h----hhc-c-CCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 340 ---F----ADL-Y-GQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 340 ---~----~d~-~-g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+ ... . ........+.|.+|++++++++||++++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~ 340 (363)
T 3dp7_A 297 TASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQ 340 (363)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCC
T ss_pred chhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEE
Confidence 0 000 0 000111346799999999999999988754
No 102
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.36 E-value=2.1e-12 Score=123.85 Aligned_cols=109 Identities=17% Similarity=0.010 Sum_probs=76.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
+++.+.+.++. .++.+|||+|||+|+++..||++|+.|+|+|+|..|+..++-.+. ..
T Consensus 33 ~~~~il~~l~l---~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~---~~---------------- 90 (261)
T 3iv6_A 33 DRENDIFLENI---VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALA---DR---------------- 90 (261)
T ss_dssp HHHHHHHTTTC---CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTS---SS----------------
T ss_pred HHHHHHHhcCC---CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH---hc----------------
Confidence 33444444432 257799999999999999999999999999999999987762110 00
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccC--CCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcE
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS--DPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~--~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~ 329 (397)
.+.+++.++.. .....++||+|++++.+. ..+++..+++.+.++| |||+
T Consensus 91 --------------------------~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~ 143 (261)
T 3iv6_A 91 --------------------------CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGT 143 (261)
T ss_dssp --------------------------CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSE
T ss_pred --------------------------cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcE
Confidence 01122222110 001247899999987553 4456888999999999 9999
Q ss_pred EE
Q 015966 330 WI 331 (397)
Q Consensus 330 wI 331 (397)
++
T Consensus 144 l~ 145 (261)
T 3iv6_A 144 VR 145 (261)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 103
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.36 E-value=1.2e-11 Score=115.75 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=96.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..||+++. .|+|+|+|..|+..|+..+.. +
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~----~----------------------------- 95 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAY----N----------------------------- 95 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHH----C-----------------------------
Confidence 467999999999999999999987 899999999999877632210 0
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccC------------------ChhhHHHHHHHHHHhccCC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID------------------TAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFID------------------ta~Ni~~yi~~I~~~LKPG 327 (397)
....++.++.+|+.++.. ....++||+|+++ ||.. ...++.++++.+.++||||
T Consensus 96 -----~~~~~v~~~~~D~~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 169 (259)
T 3lpm_A 96 -----QLEDQIEIIEYDLKKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG 169 (259)
T ss_dssp -----TCTTTEEEECSCGGGGGG-TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE
T ss_pred -----CCcccEEEEECcHHHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC
Confidence 011247889999988642 1225789999986 4322 0134668999999999999
Q ss_pred cEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 328 G~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
|+++-+-| .-..+++..++++.||.......
T Consensus 170 G~l~~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 170 GKANFVHR-----------------PERLLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp EEEEEEEC-----------------TTTHHHHHHHHHHTTEEEEEEEE
T ss_pred cEEEEEEc-----------------HHHHHHHHHHHHHCCCceEEEEE
Confidence 99995211 13467889999999999887543
No 104
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.35 E-value=2.7e-12 Score=126.50 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=79.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..|+-.....
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~--------------------------------- 111 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKAN--------------------------------- 111 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHc---------------------------------
Confidence 467999999999999999999998 89999999 5988776433210
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
...+++.++.+|+.++- . ..++||+|++.. ++.....+..+++.+.++|||||++|
T Consensus 112 -----~~~~~v~~~~~d~~~~~-~--~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 112 -----KLDHVVTIIKGKVEEVE-L--PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp -----TCTTTEEEEESCTTTCC-C--SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCcEEEEECcHHHcc-C--CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 01123788999998862 2 258999999853 46555678899999999999999998
No 105
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.35 E-value=8.6e-12 Score=111.22 Aligned_cols=118 Identities=12% Similarity=0.120 Sum_probs=88.4
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
+.+|||+|||+|.++..+++. +..|+|+|+|..|+..++..+... .
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------------------~---- 113 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL----------------------------K---- 113 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----------------------------T----
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc----------------------------C----
Confidence 569999999999999999987 789999999999998776332110 0
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe-cCCcchhhhccCC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL-GPLLYHFADLYGQ 346 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~-GPLlYh~~d~~g~ 346 (397)
. .++.+..+|+.++.. .++||+|++..+ .++..+++.+.++|||||+++-. |+
T Consensus 114 ------~-~~v~~~~~d~~~~~~----~~~~D~i~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~----------- 167 (207)
T 1jsx_A 114 ------L-ENIEPVQSRVEEFPS----EPPFDGVISRAF----ASLNDMVSWCHHLPGEQGRFYALKGQ----------- 167 (207)
T ss_dssp ------C-SSEEEEECCTTTSCC----CSCEEEEECSCS----SSHHHHHHHHTTSEEEEEEEEEEESS-----------
T ss_pred ------C-CCeEEEecchhhCCc----cCCcCEEEEecc----CCHHHHHHHHHHhcCCCcEEEEEeCC-----------
Confidence 0 126788899877531 468999986443 44678999999999999999842 11
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 347 EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 347 ~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
...+++.+++. ||++++..
T Consensus 168 -------~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 168 -------MPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp -------CCHHHHHTSCT--TEEEEEEE
T ss_pred -------CchHHHHHHhc--CCceeeee
Confidence 34567777665 99988754
No 106
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.34 E-value=5.5e-12 Score=123.11 Aligned_cols=101 Identities=16% Similarity=0.252 Sum_probs=78.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..|+-.+...
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~--------------------------------- 83 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELN--------------------------------- 83 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHc---------------------------------
Confidence 456999999999999999999997 89999999 6987766332110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe---eccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
....++.++.+|+.++.. ..++||+|++. +++.....+..+++.+.++|||||++|
T Consensus 84 -----~~~~~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 84 -----GFSDKITLLRGKLEDVHL---PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp -----TCTTTEEEEESCTTTSCC---SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCCEEEEECchhhccC---CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 011237789999887632 24789999986 456555667889999999999999998
No 107
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.34 E-value=6.9e-12 Score=122.94 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=77.4
Q ss_pred CCCCeEEEecCCCChhH-HHHHH-cCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 188 ESPPACLVPGAGLGRLA-LEISH-LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa-~eLA~-~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
.++.+|||+|||+|.++ ..+|+ .|..|+|+|+|..|+..|+-.+...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~------------------------------- 169 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL------------------------------- 169 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-------------------------------
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-------------------------------
Confidence 47889999999999875 56676 4999999999999999887433210
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
.. .++.++.||+.++- ++.||+|+.... .++..++++.++++|||||+++-
T Consensus 170 -------gl-~~v~~v~gDa~~l~-----d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 170 -------GV-DGVNVITGDETVID-----GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp -------TC-CSEEEEESCGGGGG-----GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEE
T ss_pred -------CC-CCeEEEECchhhCC-----CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEE
Confidence 11 24788999998852 478999987544 35677999999999999999995
No 108
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.34 E-value=4.5e-13 Score=125.52 Aligned_cols=152 Identities=14% Similarity=0.152 Sum_probs=88.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|+++..|+++|. .|+|+|+|+.||..+... ... .. ...
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~---~~~---~~-------------------~~~---- 87 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRS---DER---VV-------------------VME---- 87 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHT---CTT---EE-------------------EEC----
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHh---Ccc---cc-------------------ccc----
Confidence 467999999999999999999996 999999999998654310 000 00 000
Q ss_pred CCCCCCCCCcceeEe-cccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE-ecCCcchhh-hcc
Q 015966 268 HPASAGITEGFSMCG-GDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFA-DLY 344 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~-GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN-~GPLlYh~~-d~~ 344 (397)
..++.++. +|+.... .....||+|+.. +..+++.++++|||||.++- +.|. |... ...
T Consensus 88 -------~~~~~~~~~~~~~~~~---~d~~~~D~v~~~--------l~~~l~~i~rvLkpgG~lv~~~~p~-~e~~~~~~ 148 (232)
T 3opn_A 88 -------QFNFRNAVLADFEQGR---PSFTSIDVSFIS--------LDLILPPLYEILEKNGEVAALIKPQ-FEAGREQV 148 (232)
T ss_dssp -------SCCGGGCCGGGCCSCC---CSEEEECCSSSC--------GGGTHHHHHHHSCTTCEEEEEECHH-HHSCHHHH
T ss_pred -------cceEEEeCHhHcCcCC---CCEEEEEEEhhh--------HHHHHHHHHHhccCCCEEEEEECcc-cccCHHHh
Confidence 00111122 3322100 012344544322 25789999999999999985 3332 1110 001
Q ss_pred CC--C--CCccccCCHHHHHHHHHhCCCEEEEEe-ecCCCCCCCccccc
Q 015966 345 GQ--E--DEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYTTNPRSMM 388 (397)
Q Consensus 345 g~--~--~~~~ieLS~EEl~~ll~~~GFeii~e~-~i~~~Y~~d~~sm~ 388 (397)
+. . +......+.+++.+++++.||+++... ...++.-.|.+-++
T Consensus 149 ~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~gn~e~l~ 197 (232)
T 3opn_A 149 GKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLV 197 (232)
T ss_dssp C-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTTTBCCEEE
T ss_pred CcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCCCCHHHHH
Confidence 10 0 111223589999999999999998854 33333334444443
No 109
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.34 E-value=5.1e-12 Score=120.46 Aligned_cols=128 Identities=20% Similarity=0.196 Sum_probs=94.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|++|.. |+|+|+|..|+..|+..+.. +
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~----n----------------------------- 171 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL----N----------------------------- 171 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHH----c-----------------------------
Confidence 4679999999999999999999985 99999999999877632110 0
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
...+.+.++.+|+.++.. .++||+|++.. .....++++.+.++|||||+++-. .+... +
T Consensus 172 -----~~~~~v~~~~~D~~~~~~----~~~fD~Vi~~~----p~~~~~~l~~~~~~LkpgG~l~~~-----~~~~~-~-- 230 (278)
T 2frn_A 172 -----KVEDRMSAYNMDNRDFPG----ENIADRILMGY----VVRTHEFIPKALSIAKDGAIIHYH-----NTVPE-K-- 230 (278)
T ss_dssp -----TCTTTEEEECSCTTTCCC----CSCEEEEEECC----CSSGGGGHHHHHHHEEEEEEEEEE-----EEEEG-G--
T ss_pred -----CCCceEEEEECCHHHhcc----cCCccEEEECC----chhHHHHHHHHHHHCCCCeEEEEE-----Eeecc-c--
Confidence 011236789999888642 57899998743 233457899999999999999941 11100 0
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
....-..+++.+++++.||++..
T Consensus 231 --~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 231 --LMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp --GTTTTTHHHHHHHHHHTTCEEEE
T ss_pred --cccccHHHHHHHHHHHcCCeeEE
Confidence 01234678999999999999876
No 110
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.34 E-value=2.8e-11 Score=110.07 Aligned_cols=141 Identities=18% Similarity=0.128 Sum_probs=92.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..+.-.. ..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~---~~----------------------------- 120 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIV---EE----------------------------- 120 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH---SS-----------------------------
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHH---hc-----------------------------
Confidence 5679999999999999999987 3 68999999999986554211 00
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
..++.++.+|+.+........++||+|++... .......+++.++++|||||+++-. +.......
T Consensus 121 ---------~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~----~~~~~~~~ 185 (227)
T 1g8a_A 121 ---------RRNIVPILGDATKPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIA----VKSRSIDV 185 (227)
T ss_dssp ---------CTTEEEEECCTTCGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE----EEGGGTCT
T ss_pred ---------cCCCEEEEccCCCcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEE----EecCCCCC
Confidence 01267788888763210112358999996543 2222345699999999999999853 22111100
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEeecCCCCC
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYT 381 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i~~~Y~ 381 (397)
..+ ...++.+++..+ .+. |++++.... .+|.
T Consensus 186 ~~~--~~~~~~~~l~~l-~~~-f~~~~~~~~-~~~~ 216 (227)
T 1g8a_A 186 TKE--PEQVFREVEREL-SEY-FEVIERLNL-EPYE 216 (227)
T ss_dssp TSC--HHHHHHHHHHHH-HTT-SEEEEEEEC-TTTS
T ss_pred CCC--hhhhhHHHHHHH-Hhh-ceeeeEecc-Cccc
Confidence 111 225677889888 666 999876543 3443
No 111
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.33 E-value=6.7e-12 Score=111.34 Aligned_cols=104 Identities=11% Similarity=0.086 Sum_probs=79.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|.++..|+++ | -.|+|+|+|..|+..++-.+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 70 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL------------------------------- 70 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 5679999999999999999997 2 48999999999998776332110
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee-c--------cCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-F--------IDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F-F--------IDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.++.+|+.++... ..++||+|++.. | +....+..++++.+.++|||||+++-
T Consensus 71 -------~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 71 -------NLIDRVTLIKDGHQNMDKY--IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp -------TCGGGEEEECSCGGGGGGT--CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCCeEEEECCHHHHhhh--ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 0012378899998876421 247899999775 2 23444667899999999999999985
No 112
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.33 E-value=1.9e-11 Score=118.70 Aligned_cols=143 Identities=12% Similarity=0.063 Sum_probs=99.6
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
..+|||+|||+|.++..|+++ +..++++|+ ..|+..++..+...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------------------------------- 225 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--------------------------------- 225 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT---------------------------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc---------------------------------
Confidence 689999999999999999998 678999999 77987666322110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCc--------
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLL-------- 337 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLl-------- 337 (397)
....++.+..+||.+... ...+.||+|+....+. ..++....++.++++|||||++|-..+.+
T Consensus 226 -----~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~ 298 (352)
T 3mcz_A 226 -----DLGGRVEFFEKNLLDARN--FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPA 298 (352)
T ss_dssp -----TCGGGEEEEECCTTCGGG--GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSH
T ss_pred -----CCCCceEEEeCCcccCcc--cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCc
Confidence 012347889999987531 0135699999876554 34457899999999999999998532111
Q ss_pred ch-hhhc-cCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 338 YH-FADL-YGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 338 Yh-~~d~-~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
+. +.+. .........+.|.+|++++++++||++++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 299 LSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp HHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 00 0000 000000134689999999999999999884
No 113
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.33 E-value=3.5e-12 Score=109.50 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=71.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..++++|..|+|+|+|..|+..++..+... .
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~------- 87 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT--------------------------G------- 87 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHc--------------------------C-------
Confidence 3568999999999999999999999999999999998776322110 0
Q ss_pred CCCCCCCCcceeEecccccccC-CCCCCCCccEEEEe--eccCChhhHHHHHHHHH--HhccCCcEEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTC--FFIDTAHNIVEYIEIIS--RILKDGGVWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~-~~~~~~~fD~VvT~--FFIDta~Ni~~yi~~I~--~~LKPGG~wIN 332 (397)
. ++.++.+|+.+... .+...++||+|++. |. .... +.++.+. ++|||||+++-
T Consensus 88 -----~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 88 -----L--GARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLA---ALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp -----C--CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTT---HHHHHHHHHTCEEEEEEEEE
T ss_pred -----C--ceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHH---HHHHHHHhhcccCCCcEEEE
Confidence 0 25778888877421 01112479999987 43 3333 4455555 99999999984
No 114
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=2.5e-11 Score=104.79 Aligned_cols=132 Identities=12% Similarity=0.051 Sum_probs=96.3
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
+.+.+.+.++. .++.+|||+|||+|.++..+++.+..|+|+|+|..|+..++..+...
T Consensus 23 ~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------- 80 (183)
T 2yxd_A 23 IRAVSIGKLNL---NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKF------------------- 80 (183)
T ss_dssp HHHHHHHHHCC---CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHc-------------------
Confidence 44444444432 25679999999999999999998889999999999998776322100
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~ 333 (397)
. . .++.+..+|+.+... .+.||+|++... .++.++++.++++ |||++|-.
T Consensus 81 -------~------------~-~~~~~~~~d~~~~~~----~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~ 130 (183)
T 2yxd_A 81 -------N------------I-KNCQIIKGRAEDVLD----KLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVAN 130 (183)
T ss_dssp -------T------------C-CSEEEEESCHHHHGG----GCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEE
T ss_pred -------C------------C-CcEEEEECCcccccc----CCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEE
Confidence 0 0 126788899887432 368999988765 5677899999998 99999953
Q ss_pred cCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 334 GPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 334 GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
.+. .-..+++.+++++.||++...
T Consensus 131 ~~~----------------~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 131 TIV----------------LENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ESC----------------HHHHHHHHHHHHHTTCEEEEE
T ss_pred ecc----------------cccHHHHHHHHHHcCCeEEEE
Confidence 221 113577899999999988764
No 115
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.33 E-value=1.4e-11 Score=112.47 Aligned_cols=128 Identities=13% Similarity=0.135 Sum_probs=88.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+-.+... .
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~--------------------------~----- 86 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS--------------------------E----- 86 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS--------------------------C-----
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc--------------------------C-----
Confidence 4678999999999999999998 789999999999998776322100 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh----h---h--HHHHHHHHHHhccCCcEEEEecCCc
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA----H---N--IVEYIEIISRILKDGGVWINLGPLL 337 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta----~---N--i~~yi~~I~~~LKPGG~wIN~GPLl 337 (397)
..++.++.+|+.++.. ....++||.|+.+| -+.- + . ...+++.++++|||||+++-..+
T Consensus 87 --------~~nv~~~~~d~~~l~~-~~~~~~~d~v~~~~-~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td-- 154 (213)
T 2fca_A 87 --------AQNVKLLNIDADTLTD-VFEPGEVKRVYLNF-SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD-- 154 (213)
T ss_dssp --------CSSEEEECCCGGGHHH-HCCTTSCCEEEEES-CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES--
T ss_pred --------CCCEEEEeCCHHHHHh-hcCcCCcCEEEEEC-CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC--
Confidence 0136788899877521 01247899987654 2220 0 0 25789999999999999984211
Q ss_pred chhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 338 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 338 Yh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
..--.+++.+++.+.||++...
T Consensus 155 --------------~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 155 --------------NRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp --------------CHHHHHHHHHHHHHHTCEEEEE
T ss_pred --------------CHHHHHHHHHHHHHCCCccccc
Confidence 0112356667777889988764
No 116
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.32 E-value=7.2e-12 Score=115.68 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=100.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi 246 (397)
.|+..+..+...+.. .++.+|||+|||+|.++..++++ +..|+|+|+|..|+..|+-.+...
T Consensus 77 ~~~~~~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------ 141 (255)
T 3mb5_A 77 VHPKDAALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA------------ 141 (255)
T ss_dssp CCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH------------
T ss_pred ccHhHHHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc------------
Confidence 455555666655542 26779999999999999999999 789999999999998776332110
Q ss_pred ccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccC
Q 015966 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (397)
Q Consensus 247 ~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKP 326 (397)
...+++.+..+|+.+... .++||+|+.. . ++...+++.+.++|||
T Consensus 142 --------------------------~~~~~v~~~~~d~~~~~~----~~~~D~v~~~----~-~~~~~~l~~~~~~L~~ 186 (255)
T 3mb5_A 142 --------------------------GFDDRVTIKLKDIYEGIE----EENVDHVILD----L-PQPERVVEHAAKALKP 186 (255)
T ss_dssp --------------------------TCTTTEEEECSCGGGCCC----CCSEEEEEEC----S-SCGGGGHHHHHHHEEE
T ss_pred --------------------------CCCCceEEEECchhhccC----CCCcCEEEEC----C-CCHHHHHHHHHHHcCC
Confidence 001236788999887532 4789999862 2 3345789999999999
Q ss_pred CcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCC--CEEEEE
Q 015966 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG--FEFEKE 373 (397)
Q Consensus 327 GG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~G--Feii~e 373 (397)
||+++-+.|.. -..+++.+.+++.| |..++.
T Consensus 187 gG~l~~~~~~~----------------~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 187 GGFFVAYTPCS----------------NQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EEEEEEEESSH----------------HHHHHHHHHHHHTGGGBSCCEE
T ss_pred CCEEEEEECCH----------------HHHHHHHHHHHHcCCCccccEE
Confidence 99999644321 13567888889999 976653
No 117
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.32 E-value=2.3e-11 Score=111.47 Aligned_cols=136 Identities=10% Similarity=-0.025 Sum_probs=87.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..+. +.+...
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~---~~a~~~---------------------------- 125 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI---NLAKKR---------------------------- 125 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH---HHHHHC----------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH---HHhhcc----------------------------
Confidence 5779999999999999999987 378999999998865332 111100
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
.++.++.+|+.+....+...++||+|++... .......+++.+.++|||||+++-. ...-....+
T Consensus 126 ----------~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~---~~~~~~~~~ 190 (233)
T 2ipx_A 126 ----------TNIIPVIEDARHPHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVIS---IKANCIDST 190 (233)
T ss_dssp ----------TTEEEECSCTTCGGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEE---EEHHHHCSS
T ss_pred ----------CCeEEEEcccCChhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEE---EcccccccC
Confidence 1266788888763211123578999997543 2223456788999999999999841 111010111
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.+ ...+-.++ .+++++.||++++..
T Consensus 191 -~~--~~~~~~~~-~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 191 -AS--AEAVFASE-VKKMQQENMKPQEQL 215 (233)
T ss_dssp -SC--HHHHHHHH-HHTTGGGTEEEEEEE
T ss_pred -CC--HHHHHHHH-HHHHHHCCCceEEEE
Confidence 11 11111233 478889999998754
No 118
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.32 E-value=4e-11 Score=118.33 Aligned_cols=154 Identities=17% Similarity=0.197 Sum_probs=104.1
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
...|.+.++- .+..+|||+|||+|.++..|+++ +..++++|+ ..|+..++-.+...
T Consensus 191 ~~~l~~~~~~---~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------------------ 248 (369)
T 3gwz_A 191 AGQVAAAYDF---SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR------------------ 248 (369)
T ss_dssp HHHHHHHSCC---TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT------------------
T ss_pred HHHHHHhCCC---ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc------------------
Confidence 4455555542 25689999999999999999998 668999999 99998776322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~w 330 (397)
....++.+..+||.+.. | ..||+|+....+. ..+...+.++.++++|||||++
T Consensus 249 --------------------~l~~~v~~~~~d~~~~~--p---~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l 303 (369)
T 3gwz_A 249 --------------------GLADRCEILPGDFFETI--P---DGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRL 303 (369)
T ss_dssp --------------------TCTTTEEEEECCTTTCC--C---SSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEE
T ss_pred --------------------CcCCceEEeccCCCCCC--C---CCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 11234889999997432 2 3799999876543 2233558999999999999999
Q ss_pred EEecCCcch-------hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 331 INLGPLLYH-------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 331 IN~GPLlYh-------~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
|-.-+..-. +.+..-......-+.|.+|++++++++||++++...
T Consensus 304 ~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 304 LVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp EEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred EEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 853221100 000000000012368999999999999999998654
No 119
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.32 E-value=9.5e-12 Score=112.59 Aligned_cols=129 Identities=13% Similarity=0.090 Sum_probs=91.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+..+... .
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~----- 89 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--------------------------G----- 89 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------------------------C-----
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--------------------------C-----
Confidence 4679999999999999999998 579999999999998776322100 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChh---------hHHHHHHHHHHhccCCcEEEEecCCc
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH---------NIVEYIEIISRILKDGGVWINLGPLL 337 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~---------Ni~~yi~~I~~~LKPGG~wIN~GPLl 337 (397)
. .++.++.+|+.++.. ....++||+|++.| .+... ....+++.++++|||||+++-..+.
T Consensus 90 -------~-~~v~~~~~d~~~~~~-~~~~~~~D~i~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~- 158 (214)
T 1yzh_A 90 -------V-PNIKLLWVDGSDLTD-YFEDGEIDRLYLNF-SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN- 158 (214)
T ss_dssp -------C-SSEEEEECCSSCGGG-TSCTTCCSEEEEES-CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC-
T ss_pred -------C-CCEEEEeCCHHHHHh-hcCCCCCCEEEEEC-CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC-
Confidence 0 136788899877431 01257899999875 33210 1247899999999999998841110
Q ss_pred chhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 338 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 338 Yh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.--.+++.+++++.||+++...
T Consensus 159 ---------------~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 159 ---------------RGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred ---------------HHHHHHHHHHHHHCCCeeeecc
Confidence 0113678888888999988754
No 120
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.31 E-value=3.3e-11 Score=117.80 Aligned_cols=155 Identities=13% Similarity=0.053 Sum_probs=103.6
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
....|.+.++. .+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+...
T Consensus 178 ~~~~l~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----------------- 236 (359)
T 1x19_A 178 AIQLLLEEAKL---DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK----------------- 236 (359)
T ss_dssp HHHHHHHHCCC---TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT-----------------
T ss_pred hHHHHHHhcCC---CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc-----------------
Confidence 44455555542 25679999999999999999998 679999999 99998766322100
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~ 329 (397)
....++.+..+|+.+. .. ..+|+|+..+.+... ++....++.++++|||||+
T Consensus 237 ---------------------~~~~~v~~~~~d~~~~-~~----~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~ 290 (359)
T 1x19_A 237 ---------------------GVADRMRGIAVDIYKE-SY----PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGR 290 (359)
T ss_dssp ---------------------TCTTTEEEEECCTTTS-CC----CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCE
T ss_pred ---------------------CCCCCEEEEeCccccC-CC----CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCE
Confidence 0112378899999875 21 223999988765433 3478999999999999999
Q ss_pred EEEecCCcc-----hhh---hc---cCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 330 WINLGPLLY-----HFA---DL---YGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 330 wIN~GPLlY-----h~~---d~---~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
+|-+.+..- .+. .. .+...+....++.+|++++++++||++++...
T Consensus 291 l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 291 LLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp EEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEE
T ss_pred EEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEe
Confidence 964221100 000 00 01000001128999999999999999988653
No 121
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.31 E-value=1.7e-11 Score=113.03 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=77.6
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~--~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|..+..||+ .+..|+|+|+|..|+..|+..+...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 118 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY-------------------------------- 118 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 456999999999999999999 5789999999999998877433210
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.++.+|+.+... +...++||+|+.... ..+...+++.+.++|||||++|-
T Consensus 119 ------~~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 119 ------HFENQVRIIEGNALEQFE-NVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ------TCTTTEEEEESCGGGCHH-HHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEE
T ss_pred ------CCCCcEEEEECCHHHHHH-hhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEE
Confidence 011247889999987532 012478999985432 34577899999999999999985
No 122
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.30 E-value=2.3e-11 Score=110.74 Aligned_cols=141 Identities=20% Similarity=0.240 Sum_probs=93.1
Q ss_pred chhhHHHHHHHHHHhc--ccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEE
Q 015966 143 ADVDKVRCIIRNIVRD--WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGN 217 (397)
Q Consensus 143 ~d~dkv~stL~q~~RD--WS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~Gn 217 (397)
.|-+.+...+.++.+. |...-..+. ..++..+.... ++.+|||+|||+|.++..||+. |..|+|+
T Consensus 20 ~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~v 89 (221)
T 3u81_A 20 GDPQSVLEAIDTYCTQKEWAMNVGDAK----GQIMDAVIREY------SPSLVLELGAYCGYSAVRMARLLQPGARLLTM 89 (221)
T ss_dssp TCHHHHHHHHHHHHHHHTCGGGCCHHH----HHHHHHHHHHH------CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEE
T ss_pred CCHHHHHHHHHHHhhhcCcCcccCHHH----HHHHHHHHHhc------CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEE
Confidence 4556777788888764 432222222 12444444432 4569999999999999999984 7899999
Q ss_pred eCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCC-C--CC
Q 015966 218 EFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD-P--SQ 294 (397)
Q Consensus 218 D~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~-~--~~ 294 (397)
|+|..|+..|+-.+... ....++.++.||+.++... + ..
T Consensus 90 D~~~~~~~~a~~~~~~~--------------------------------------~~~~~v~~~~~d~~~~l~~~~~~~~ 131 (221)
T 3u81_A 90 EINPDCAAITQQMLNFA--------------------------------------GLQDKVTILNGASQDLIPQLKKKYD 131 (221)
T ss_dssp ESCHHHHHHHHHHHHHH--------------------------------------TCGGGEEEEESCHHHHGGGTTTTSC
T ss_pred eCChHHHHHHHHHHHHc--------------------------------------CCCCceEEEECCHHHHHHHHHHhcC
Confidence 99999998877332211 0112378899998764221 0 01
Q ss_pred CCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 295 VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 295 ~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
.++||+|+.........+..++++.+ ++|||||++|-
T Consensus 132 ~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~ 168 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLA 168 (221)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEE
T ss_pred CCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEE
Confidence 26899997654333334455677777 99999999994
No 123
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.30 E-value=3e-11 Score=114.00 Aligned_cols=136 Identities=20% Similarity=0.205 Sum_probs=98.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
.+++.+.+.++ .++.+|||+|||+|.++..||+. +..|+|+|+|..|+..++......
T Consensus 97 ~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~---------------- 156 (276)
T 2b3t_A 97 CLVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL---------------- 156 (276)
T ss_dssp HHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----------------
Confidence 36666666654 24679999999999999999976 789999999999998877322100
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee-ccCCh-------------------
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTA------------------- 310 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F-FIDta------------------- 310 (397)
.+ .++.++.+|+.+... .++||+|++.. |+...
T Consensus 157 ------------~~-----------~~v~~~~~d~~~~~~----~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~ 209 (276)
T 2b3t_A 157 ------------AI-----------KNIHILQSDWFSALA----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVA 209 (276)
T ss_dssp ------------TC-----------CSEEEECCSTTGGGT----TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBC
T ss_pred ------------CC-----------CceEEEEcchhhhcc----cCCccEEEECCCCCCccccccChhhhhcCcHHHHcC
Confidence 00 126788899877532 46899999873 33221
Q ss_pred -----hhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 311 -----HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 311 -----~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
..+...++.+.++|||||+++-.-+ ..+.+++++++++.||+.++
T Consensus 210 ~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-----------------~~~~~~~~~~l~~~Gf~~v~ 259 (276)
T 2b3t_A 210 ADSGMADIVHIIEQSRNALVSGGFLLLEHG-----------------WQQGEAVRQAFILAGYHDVE 259 (276)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------------SSCHHHHHHHHHHTTCTTCC
T ss_pred CCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------------chHHHHHHHHHHHCCCcEEE
Confidence 3467789999999999999984210 13578999999999997654
No 124
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=5.1e-12 Score=126.85 Aligned_cols=118 Identities=19% Similarity=0.223 Sum_probs=86.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+++.|.+..... ..++.+|||+|||+|.++..++++|..|+|+|+|..|+..++..+.. +
T Consensus 218 ~ll~~l~~~l~~~-~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~----~-------------- 278 (381)
T 3dmg_A 218 LLLEALQERLGPE-GVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEA----N-------------- 278 (381)
T ss_dssp HHHHHHHHHHCTT-TTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHHHhhccc-CCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 3566665543211 12567999999999999999999999999999999999877632210 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee--cc---CChhhHHHHHHHHHHhccCC
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FI---DTAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F--FI---Dta~Ni~~yi~~I~~~LKPG 327 (397)
. -.+.++.+|+.+... ..++||+|++.. .. .+..+...+|+.+.++||||
T Consensus 279 --------~--------------~~v~~~~~D~~~~~~---~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpG 333 (381)
T 3dmg_A 279 --------A--------------LKAQALHSDVDEALT---EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPG 333 (381)
T ss_dssp --------T--------------CCCEEEECSTTTTSC---TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEE
T ss_pred --------C--------------CCeEEEEcchhhccc---cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcC
Confidence 0 015678899877532 247999999873 22 22456789999999999999
Q ss_pred cEEEEec
Q 015966 328 GVWINLG 334 (397)
Q Consensus 328 G~wIN~G 334 (397)
|+++-+.
T Consensus 334 G~l~iv~ 340 (381)
T 3dmg_A 334 GVFFLVS 340 (381)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999643
No 125
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=2.2e-11 Score=115.33 Aligned_cols=163 Identities=17% Similarity=0.092 Sum_probs=102.2
Q ss_pred HHhcccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC--eEEEEeCCHHHHHHHHhhh
Q 015966 155 IVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF--ISQGNEFSYYMMICSSFIL 231 (397)
Q Consensus 155 ~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf--~V~GnD~S~~ML~~s~fiL 231 (397)
-+|.|... |. .+-..|.+-+.....+++.+|||+|||+|.++..||+. |- .|+|+|+|..|+..++-.
T Consensus 51 e~r~w~p~----rs----klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~- 121 (233)
T 4df3_A 51 EYREWNAY----RS----KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTV- 121 (233)
T ss_dssp EEEECCTT----TC----HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHH-
T ss_pred eeeeECCC----ch----HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHh-
Confidence 48888843 33 34555555444334458899999999999999999987 54 699999999999755421
Q ss_pred hcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChh
Q 015966 232 NHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH 311 (397)
Q Consensus 232 n~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~ 311 (397)
+.+ ..++..+.+|..+....+...+.+|+|+..+... .
T Consensus 122 --a~~--------------------------------------~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~--~ 159 (233)
T 4df3_A 122 --VRD--------------------------------------RRNIFPILGDARFPEKYRHLVEGVDGLYADVAQP--E 159 (233)
T ss_dssp --STT--------------------------------------CTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCT--T
T ss_pred --hHh--------------------------------------hcCeeEEEEeccCccccccccceEEEEEEeccCC--h
Confidence 111 0124455566554322233457899987654322 3
Q ss_pred hHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 312 NIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 312 Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
+....++.+++.|||||.++-. +.+--.+.. .++ .-...+..+.|++.||++++...
T Consensus 160 ~~~~~l~~~~r~LKpGG~lvI~--ik~r~~d~~-~p~----~~~~~~ev~~L~~~GF~l~e~i~ 216 (233)
T 4df3_A 160 QAAIVVRNARFFLRDGGYMLMA--IKARSIDVT-TEP----SEVYKREIKTLMDGGLEIKDVVH 216 (233)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE--EECCHHHHH-TCC----CHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hHHHHHHHHHHhccCCCEEEEE--EecccCCCC-CCh----HHHHHHHHHHHHHCCCEEEEEEc
Confidence 4567899999999999999842 011111111 111 11123445567788999987543
No 126
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.29 E-value=1.1e-12 Score=120.11 Aligned_cols=136 Identities=12% Similarity=-0.012 Sum_probs=93.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..||++|..|+|+|+|..|+..++..+... .
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------- 124 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVY--------------------------G------- 124 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 4679999999999999999999999999999999998776332110 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~ 348 (397)
...++.++.+|+.++.. .++||+|++..-+....+....+..++++|||||++|-- ++.. .....
T Consensus 125 -----~~~~~~~~~~d~~~~~~----~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~-----~~~~-~~~~~ 189 (241)
T 3gdh_A 125 -----IADKIEFICGDFLLLAS----FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR-----LSKK-ITNNI 189 (241)
T ss_dssp -----CGGGEEEEESCHHHHGG----GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH-----HHHH-HCSCE
T ss_pred -----CCcCeEEEECChHHhcc----cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH-----HHHh-hCCce
Confidence 01237889999988642 478999998653333333334677889999999997620 0000 00000
Q ss_pred --CccccCCHHHHHHHHHhCCCEEEE
Q 015966 349 --EMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 349 --~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
...-.++.+++..++...|.-.+.
T Consensus 190 ~~~lp~~~~~~~~~~~l~~~g~~~i~ 215 (241)
T 3gdh_A 190 VYFLPRNADIDQVASLAGPGGQVEIE 215 (241)
T ss_dssp EEEEETTBCHHHHHHTTCTTCCEEEE
T ss_pred EEECCCCCCHHHHHHHhccCCCEEEE
Confidence 012246889999999877654443
No 127
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.29 E-value=9.6e-12 Score=117.52 Aligned_cols=123 Identities=15% Similarity=0.039 Sum_probs=91.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++-.+... . +
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------~-g---- 160 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEF------------------------Y-D---- 160 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTT------------------------S-C----
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhc------------------------C-C----
Confidence 5679999999999999999998 789999999999998776322100 0 0
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
..++.+..+|+.+.. ..++||+|++ + .++..++++.+.++|||||+++-..|..
T Consensus 161 ---------~~~v~~~~~d~~~~~----~~~~fD~Vi~----~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~-------- 214 (275)
T 1yb2_A 161 ---------IGNVRTSRSDIADFI----SDQMYDAVIA----D-IPDPWNHVQKIASMMKPGSVATFYLPNF-------- 214 (275)
T ss_dssp ---------CTTEEEECSCTTTCC----CSCCEEEEEE----C-CSCGGGSHHHHHHTEEEEEEEEEEESSH--------
T ss_pred ---------CCcEEEEECchhccC----cCCCccEEEE----c-CcCHHHHHHHHHHHcCCCCEEEEEeCCH--------
Confidence 013678889987732 2478999987 2 2344588999999999999999643321
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
-..+++.+.+++.||+.++..
T Consensus 215 --------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 215 --------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp --------HHHHHHHHHSGGGTEEEEEEE
T ss_pred --------HHHHHHHHHHHHCCCeEEEEE
Confidence 135678888889999988743
No 128
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.29 E-value=4.8e-11 Score=116.52 Aligned_cols=144 Identities=18% Similarity=0.181 Sum_probs=97.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+...
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 228 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA-------------------------------- 228 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--------------------------------
Confidence 5679999999999999999998 578999999 99998776322100
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC--hhhHHHHHHHHHHhccCCcEEEEecC--Ccc----
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGP--LLY---- 338 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni~~yi~~I~~~LKPGG~wIN~GP--LlY---- 338 (397)
....++.+..+|+.+.. | ..||+|++...+.. .......++.++++|||||++|-.-+ .+-
T Consensus 229 ------~~~~~v~~~~~d~~~~~--~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 297 (374)
T 1qzz_A 229 ------GLADRVTVAEGDFFKPL--P---VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD 297 (374)
T ss_dssp ------TCTTTEEEEECCTTSCC--S---CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------
T ss_pred ------CCCCceEEEeCCCCCcC--C---CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC
Confidence 01124788999987622 2 34999998765432 23346899999999999998874322 210
Q ss_pred -hhhhccCC---CCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 339 -HFADLYGQ---EDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 339 -h~~d~~g~---~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
.+....+. ......+++.++++++++++||++++....
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 339 (374)
T 1qzz_A 298 RFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTS 339 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEE
T ss_pred cchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEC
Confidence 00000000 000023579999999999999999886543
No 129
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.29 E-value=9e-12 Score=112.68 Aligned_cols=104 Identities=15% Similarity=0.049 Sum_probs=75.0
Q ss_pred CCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
+.+|||+|||+|.++..++.+|. .|+|+|+|..|+..|+..+... .+ .
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~~-----~ 102 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL--------------------------KC-----S 102 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------TC-----C
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh--------------------------CC-----C
Confidence 46899999999999999888886 8999999999998877322110 00 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCC-ccEEEEeeccCChhhHHHHHHHH--HHhccCCcEEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGA-WDAVVTCFFIDTAHNIVEYIEII--SRILKDGGVWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~-fD~VvT~FFIDta~Ni~~yi~~I--~~~LKPGG~wIN 332 (397)
..++.++.+|+.++... ...++ ||+|++..-.. ..+..+.++.+ .++|||||+++-
T Consensus 103 ------~~~v~~~~~d~~~~~~~-~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i 161 (201)
T 2ift_A 103 ------SEQAEVINQSSLDFLKQ-PQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYV 161 (201)
T ss_dssp ------TTTEEEECSCHHHHTTS-CCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ------ccceEEEECCHHHHHHh-hccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEE
Confidence 02377899998875321 12467 99999763222 24566788888 668999999984
No 130
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=9.6e-12 Score=114.35 Aligned_cols=138 Identities=17% Similarity=0.167 Sum_probs=98.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi 246 (397)
.|+..+..+.+.+.. .++.+|||+|||+|.++..||++ +..|+|+|+|..|+..++-.+... +
T Consensus 80 ~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~------ 145 (258)
T 2pwy_A 80 TYPKDASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF-----W------ 145 (258)
T ss_dssp CCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-----C------
T ss_pred ccchHHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh-----c------
Confidence 344455555555532 26779999999999999999998 689999999999998776332100 0
Q ss_pred ccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccC
Q 015966 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (397)
Q Consensus 247 ~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKP 326 (397)
+ ..++.+..+|+.+.. ...+.||+|+... ++...+++.+.++|||
T Consensus 146 --------------g-------------~~~v~~~~~d~~~~~---~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~~ 190 (258)
T 2pwy_A 146 --------------Q-------------VENVRFHLGKLEEAE---LEEAAYDGVALDL-----MEPWKVLEKAALALKP 190 (258)
T ss_dssp --------------C-------------CCCEEEEESCGGGCC---CCTTCEEEEEEES-----SCGGGGHHHHHHHEEE
T ss_pred --------------C-------------CCCEEEEECchhhcC---CCCCCcCEEEECC-----cCHHHHHHHHHHhCCC
Confidence 0 012677889988751 1247899998731 2345789999999999
Q ss_pred CcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 327 GG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
||+++-+.|.. -..+++.+.+++.||+.++
T Consensus 191 gG~l~~~~~~~----------------~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 191 DRFLVAYLPNI----------------TQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEEEEESCH----------------HHHHHHHHHHTTTTEEEEE
T ss_pred CCEEEEEeCCH----------------HHHHHHHHHHHHCCCceEE
Confidence 99999644321 1245777788889999776
No 131
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.28 E-value=4.4e-12 Score=112.27 Aligned_cols=142 Identities=15% Similarity=0.121 Sum_probs=84.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
+++.+.+.++.. .++.+|||+|||+|.++..++++ +..|+|+|+|..|+..++..+..
T Consensus 17 ~~~~~~~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~------------------ 76 (215)
T 4dzr_A 17 LVEEAIRFLKRM--PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER------------------ 76 (215)
T ss_dssp HHHHHHHHHTTC--CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------------------
T ss_pred HHHHHHHHhhhc--CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH------------------
Confidence 444444444321 25779999999999999999999 56999999999998765511100
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCC-CCCCCCccEEEEee-ccCC--------------------
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCF-FIDT-------------------- 309 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~-~~~~~~fD~VvT~F-FIDt-------------------- 309 (397)
. . .++.++.+|+.+.... ....++||+|++.. |...
T Consensus 77 -----~---~--------------~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~ 134 (215)
T 4dzr_A 77 -----F---G--------------AVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALD 134 (215)
T ss_dssp ----------------------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC---------------------
T ss_pred -----h---C--------------CceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCcccccc
Confidence 0 0 0256788888773320 00127899999852 1110
Q ss_pred -----hhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHH--hCCCEEEEE
Q 015966 310 -----AHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVAL--HYGFEFEKE 373 (397)
Q Consensus 310 -----a~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~--~~GFeii~e 373 (397)
...+..+++.++++|||||+++-+. . -.-..+++.++++ +.||..++.
T Consensus 135 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~---~-------------~~~~~~~~~~~l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 135 GGEDGLQFYRRMAALPPYVLARGRAGVFLE---V-------------GHNQADEVARLFAPWRERGFRVRK 189 (215)
T ss_dssp ---CTTHHHHHHHTCCGGGBCSSSEEEEEE---C-------------TTSCHHHHHHHTGGGGGGTEECCE
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCeEEEEE---E-------------CCccHHHHHHHHHHhhcCCceEEE
Confidence 1112678899999999999944211 0 0134678899999 899976653
No 132
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.28 E-value=4.7e-11 Score=115.05 Aligned_cols=153 Identities=14% Similarity=0.069 Sum_probs=103.2
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
...+.+.++- .+ .+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+...
T Consensus 157 ~~~~~~~~~~---~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------------------ 213 (334)
T 2ip2_A 157 FHEIPRLLDF---RG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL------------------ 213 (334)
T ss_dssp HHHHHHHSCC---TT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH------------------
T ss_pred HHHHHHhCCC---CC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc------------------
Confidence 3444455542 13 79999999999999999988 678999999 99987765221100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~w 330 (397)
....++.++.+||.+. . .+.||+|+....+. ..+.....++.++++|||||++
T Consensus 214 --------------------~~~~~v~~~~~d~~~~--~---~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l 268 (334)
T 2ip2_A 214 --------------------LAGERVSLVGGDMLQE--V---PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRV 268 (334)
T ss_dssp --------------------HHTTSEEEEESCTTTC--C---CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCcEEEecCCCCCC--C---CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 0012378899998772 2 25799999876553 3445679999999999999998
Q ss_pred EEecCCc-------ch-hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 331 INLGPLL-------YH-FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 331 IN~GPLl-------Yh-~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
|-..+.. +. +-+..-.......+.+.+|++++++++||++++...
T Consensus 269 ~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 269 VVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp EEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEE
Confidence 8532211 00 000000000002357999999999999999988653
No 133
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=2.8e-11 Score=112.99 Aligned_cols=103 Identities=14% Similarity=0.058 Sum_probs=78.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||+. +..|+|+|+|..|+..|+-.+...
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 111 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA------------------------------- 111 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4579999999999999999998 889999999999998776332210
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.++.||+.+........++||+|+... ...+...|++.+.++|||||++|-
T Consensus 112 -------g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~ 168 (248)
T 3tfw_A 112 -------GVDQRVTLREGPALQSLESLGECPAFDLIFIDA---DKPNNPHYLRWALRYSRPGTLIIG 168 (248)
T ss_dssp -------TCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS---CGGGHHHHHHHHHHTCCTTCEEEE
T ss_pred -------CCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC---chHHHHHHHHHHHHhcCCCeEEEE
Confidence 111247889999877432111235899997633 345677899999999999999985
No 134
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.27 E-value=8.9e-12 Score=108.71 Aligned_cols=103 Identities=18% Similarity=0.082 Sum_probs=74.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 77 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT--------------------------------- 77 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT---------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 567999999999999999999975 8999999999998776322100
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHH--HhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIIS--RILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~--~~LKPGG~wIN 332 (397)
....++.++.+|+.+... ...+.||+|++..-.. .....+.++.+. ++|||||+++-
T Consensus 78 -----~~~~~~~~~~~d~~~~~~--~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 78 -----KAENRFTLLKMEAERAID--CLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp -----TCGGGEEEECSCHHHHHH--HBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----CCCCceEEEECcHHHhHH--hhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEE
Confidence 011236788899877422 1236799998752110 134556777776 99999999984
No 135
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.27 E-value=6.9e-11 Score=114.16 Aligned_cols=144 Identities=15% Similarity=0.115 Sum_probs=98.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++-.+...
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 215 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT-------------------------------- 215 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--------------------------------
Confidence 4679999999999999999986 568999999 99998766322100
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCcch-----
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYH----- 339 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh----- 339 (397)
....++.+..+||.+-. | ..||+|++...+. ..+...+.++.++++|||||+++-.-+..-.
T Consensus 216 ------~~~~~v~~~~~d~~~~~--p---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 284 (332)
T 3i53_A 216 ------GLSGRAQVVVGSFFDPL--P---AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGT 284 (332)
T ss_dssp ------TCTTTEEEEECCTTSCC--C---CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCH
T ss_pred ------CcCcCeEEecCCCCCCC--C---CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccH
Confidence 11234889999997422 2 3799999876543 2233689999999999999999853221100
Q ss_pred hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 340 FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 340 ~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
..+..-.......+.|.+|++++++++||++++....
T Consensus 285 ~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 285 GMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPI 321 (332)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 0000000000124689999999999999999886543
No 136
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.26 E-value=3.3e-11 Score=116.67 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=93.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++.++++. +..|+|+|+|..|+..++--+..... ...
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~------------------------~~~--- 147 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR------------------------SLA--- 147 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG------------------------GGG---
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc------------------------ccC---
Confidence 4579999999999999999988 46899999999999877632210000 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC--hhhH--HHHHHHHHHhccCCcEEEEecCCcchhhh
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNI--VEYIEIISRILKDGGVWINLGPLLYHFAD 342 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni--~~yi~~I~~~LKPGG~wIN~GPLlYh~~d 342 (397)
..++.++.+|+.++... ...++||+|++..+... ...+ .++++.++++|||||+++...+-.|.
T Consensus 148 --------~~~v~~~~~D~~~~~~~-~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--- 215 (304)
T 3bwc_A 148 --------DPRATVRVGDGLAFVRQ-TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--- 215 (304)
T ss_dssp --------CTTEEEEESCHHHHHHS-SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT---
T ss_pred --------CCcEEEEECcHHHHHHh-ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc---
Confidence 12378899998775321 02578999998654322 1222 58999999999999999963321110
Q ss_pred ccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 343 LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 343 ~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
-....+++.+.+++.||..++..
T Consensus 216 ---------~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 216 ---------DLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ---------chHHHHHHHHHHHhCCCCcEEEE
Confidence 01246788899999999877643
No 137
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.25 E-value=5.6e-11 Score=115.67 Aligned_cols=143 Identities=19% Similarity=0.170 Sum_probs=97.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++..|++++ ..++++|+ ..|+..++-.+...
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 229 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE-------------------------------- 229 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--------------------------------
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--------------------------------
Confidence 56799999999999999999985 57889999 88987766322100
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCC-cc-----
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPL-LY----- 338 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPL-lY----- 338 (397)
....++.++.+|+.+.. | ..||+|+....+. ..++..+.++.++++|||||++|-..+. +-
T Consensus 230 ------~~~~~v~~~~~d~~~~~--~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 298 (360)
T 1tw3_A 230 ------GLSDRVDVVEGDFFEPL--P---RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFN 298 (360)
T ss_dssp ------TCTTTEEEEECCTTSCC--S---SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS
T ss_pred ------CCCCceEEEeCCCCCCC--C---CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc
Confidence 01124788999987632 2 3499999876543 2334568999999999999988854332 10
Q ss_pred hhhhccCC---CCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 339 HFADLYGQ---EDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 339 h~~d~~g~---~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.+....+. ......+++.+|++++++++||++++...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 299 EQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp HHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred chhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 00000000 00002357999999999999999988653
No 138
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.25 E-value=2.1e-11 Score=119.03 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=86.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||||.++..|+++|. .|+|+|+|+.||..+. .+. +. +
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~--r~~---~r-----------------------v----- 131 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKL--RQD---DR-----------------------V----- 131 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHH--HTC---TT-----------------------E-----
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHH--HhC---cc-----------------------c-----
Confidence 567999999999999999999997 8999999999986432 000 00 0
Q ss_pred CCCCCCCCCcceeEeccccccc--CCCCCCCCccEEEEee-ccCChhhHHHHHHHHHHhccCCcEEEE-ecCCcchhhh-
Q 015966 268 HPASAGITEGFSMCGGDFVEVY--SDPSQVGAWDAVVTCF-FIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFAD- 342 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely--~~~~~~~~fD~VvT~F-FIDta~Ni~~yi~~I~~~LKPGG~wIN-~GPLlYh~~d- 342 (397)
..+-..++..+. ..+ ...||+|++.. |++ +...|..++++|||||.+|- +.|. |.-..
T Consensus 132 ----------~~~~~~ni~~l~~~~l~--~~~fD~v~~d~sf~s----l~~vL~e~~rvLkpGG~lv~lvkPq-fe~~~~ 194 (291)
T 3hp7_A 132 ----------RSMEQYNFRYAEPVDFT--EGLPSFASIDVSFIS----LNLILPALAKILVDGGQVVALVKPQ-FEAGRE 194 (291)
T ss_dssp ----------EEECSCCGGGCCGGGCT--TCCCSEEEECCSSSC----GGGTHHHHHHHSCTTCEEEEEECGG-GTSCGG
T ss_pred ----------ceecccCceecchhhCC--CCCCCEEEEEeeHhh----HHHHHHHHHHHcCcCCEEEEEECcc-cccChh
Confidence 000011111110 011 24599887643 553 35789999999999999986 3553 21111
Q ss_pred ccC--CC--CCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 343 LYG--QE--DEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 343 ~~g--~~--~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
..+ +. +......+.+++.+++...||++...
T Consensus 195 ~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 195 QIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp GCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 111 01 01123468999999999999998873
No 139
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.25 E-value=3.4e-11 Score=107.80 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=80.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
+.++..+.+.+.. .++.+|||+|||+|.++..||++|..|+|+|+|..|+..++-.+...
T Consensus 63 ~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~----------------- 122 (210)
T 3lbf_A 63 PYMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL----------------- 122 (210)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc-----------------
Confidence 3455566655542 26789999999999999999999999999999999998776332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
. ..++.+..+|+.+... ..++||+|++...+.... +.+.++|||||++|
T Consensus 123 -----------~-----------~~~v~~~~~d~~~~~~---~~~~~D~i~~~~~~~~~~------~~~~~~L~pgG~lv 171 (210)
T 3lbf_A 123 -----------D-----------LHNVSTRHGDGWQGWQ---ARAPFDAIIVTAAPPEIP------TALMTQLDEGGILV 171 (210)
T ss_dssp -----------T-----------CCSEEEEESCGGGCCG---GGCCEEEEEESSBCSSCC------THHHHTEEEEEEEE
T ss_pred -----------C-----------CCceEEEECCcccCCc---cCCCccEEEEccchhhhh------HHHHHhcccCcEEE
Confidence 0 0136788999877432 257899999875443322 25789999999998
Q ss_pred E
Q 015966 332 N 332 (397)
Q Consensus 332 N 332 (397)
-
T Consensus 172 ~ 172 (210)
T 3lbf_A 172 L 172 (210)
T ss_dssp E
T ss_pred E
Confidence 5
No 140
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.25 E-value=5.6e-11 Score=113.26 Aligned_cols=155 Identities=10% Similarity=-0.007 Sum_probs=93.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeC-CHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEF-SYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~-S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
++++|.+.... .++.+|||+|||+|.++..+|+.|. .|+|+|+ |..|+..++..... +..
T Consensus 67 l~~~l~~~~~~---~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~----N~~----------- 128 (281)
T 3bzb_A 67 LADTLCWQPEL---IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIRE----HTA----------- 128 (281)
T ss_dssp HHHHHHHCGGG---TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHT----TCC-----------
T ss_pred HHHHHHhcchh---cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHH----hhh-----------
Confidence 55555554321 1456999999999999999999998 8999999 89999877732210 000
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEe---cccc-cccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhcc--
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCG---GDFV-EVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK-- 325 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~---GDF~-ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LK-- 325 (397)
... .+..+ ...++.+.. +|.. ++... ...++||+|+....+-...++..+++++.++||
T Consensus 129 ---~~~---~~~~~--------~~~~v~~~~~~~~~~~~~~~~~-~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~ 193 (281)
T 3bzb_A 129 ---NSC---SSETV--------KRASPKVVPYRWGDSPDSLQRC-TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALP 193 (281)
T ss_dssp ------------------------CCCEEEECCTTSCTHHHHHH-HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCT
T ss_pred ---hhc---ccccC--------CCCCeEEEEecCCCccHHHHhh-ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhccc
Confidence 000 00000 001244443 3322 12100 014789999986554446678899999999999
Q ss_pred -C--CcEEEE-ecCCcchhhhccCCCCCccccCCHHHHHHHHHhCC-CEEEEE
Q 015966 326 -D--GGVWIN-LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG-FEFEKE 373 (397)
Q Consensus 326 -P--GG~wIN-~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~G-Feii~e 373 (397)
| ||+++- +.|. . + .+.-..+++.+.+++.| |++++.
T Consensus 194 ~p~~gG~l~v~~~~~----~------~--~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 194 ANDPTAVALVTFTHH----R------P--HLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp TTCTTCEEEEEECC--------------------CTHHHHHHHHSTTEEEEEE
T ss_pred CCCCCCEEEEEEEee----e------c--ccchhHHHHHHHHHhcCCEEEEEe
Confidence 9 997652 2221 0 0 11223467778889999 998875
No 141
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.25 E-value=5.5e-11 Score=113.53 Aligned_cols=133 Identities=11% Similarity=0.024 Sum_probs=92.2
Q ss_pred CCeEEEecCCC---ChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCcccccc
Q 015966 190 PPACLVPGAGL---GRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 264 (397)
Q Consensus 190 ~~rVLvPGCGl---GRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~i 264 (397)
..+|||+|||+ |.++..+++. |..|+|+|+|+.||..|+-.+..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------------------------------- 126 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------------------------------- 126 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------------------------------
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------------------------------
Confidence 46999999999 9987766664 78999999999999887733210
Q ss_pred CCCCCCCCCCCCcceeEeccccccc----------CCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 265 PDIHPASAGITEGFSMCGGDFVEVY----------SDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 265 PDv~p~~~~~~~~ls~~~GDF~ely----------~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
..++.++.+|+.+.. ..+ .++||+|+... |++.. .....|++++++|||||+++
T Consensus 127 ----------~~~v~~~~~D~~~~~~~~~~~~~~~~~d--~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~ 193 (274)
T 2qe6_A 127 ----------DPNTAVFTADVRDPEYILNHPDVRRMID--FSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLF 193 (274)
T ss_dssp ----------CTTEEEEECCTTCHHHHHHSHHHHHHCC--TTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEE
T ss_pred ----------CCCeEEEEeeCCCchhhhccchhhccCC--CCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEE
Confidence 013678899987531 011 24799998764 45443 47899999999999999998
Q ss_pred E--ecCC---cc-----hhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 332 N--LGPL---LY-----HFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 332 N--~GPL---lY-----h~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
- +.+- .. .|.. .+ .+ ....|.+|+.+++ .||++++
T Consensus 194 i~~~~~~~~~~~~~~~~~~~~-~~-~~--~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 194 MTSLVDTGLPAQQKLARITRE-NL-GE--GWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp EEEEBCSSCHHHHHHHHHHHH-HH-SC--CCCBCHHHHHHTT--TTCEECT
T ss_pred EEEecCcchHHHHHHHHHHHh-cC-CC--CccCCHHHHHHHh--CCCeEcc
Confidence 4 2210 00 0111 01 11 2347999999999 4999886
No 142
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=2.1e-11 Score=113.36 Aligned_cols=104 Identities=18% Similarity=0.227 Sum_probs=77.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
+.+.+.+.++ .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-..
T Consensus 74 ~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------------------- 129 (269)
T 1p91_A 74 IVAQLRERLD----DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------------------- 129 (269)
T ss_dssp HHHHHHHHSC----TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------------------
T ss_pred HHHHHHHhcC----CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------------------
Confidence 4555555543 25679999999999999999998 899999999999997665110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
.++.+..+|+.++- ..+++||+|++.+-. ..++.+.++|||||+++
T Consensus 130 ------------------------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~~-------~~l~~~~~~L~pgG~l~ 175 (269)
T 1p91_A 130 ------------------------PQVTFCVASSHRLP---FSDTSMDAIIRIYAP-------CKAEELARVVKPGGWVI 175 (269)
T ss_dssp ------------------------TTSEEEECCTTSCS---BCTTCEEEEEEESCC-------CCHHHHHHHEEEEEEEE
T ss_pred ------------------------CCcEEEEcchhhCC---CCCCceeEEEEeCCh-------hhHHHHHHhcCCCcEEE
Confidence 01456778876642 235789999975432 34899999999999999
Q ss_pred EecC
Q 015966 332 NLGP 335 (397)
Q Consensus 332 N~GP 335 (397)
-..|
T Consensus 176 ~~~~ 179 (269)
T 1p91_A 176 TATP 179 (269)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6544
No 143
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.25 E-value=3.2e-11 Score=123.45 Aligned_cols=149 Identities=11% Similarity=0.118 Sum_probs=96.3
Q ss_pred hHHHHHHHHHHh-------------cccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-C
Q 015966 146 DKVRCIIRNIVR-------------DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G 211 (397)
Q Consensus 146 dkv~stL~q~~R-------------DWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-G 211 (397)
+-++.+|.|.+. .|+++.--| ...+.+..+.+.+.. .++.+|||+|||+|+++..+|.. |
T Consensus 123 ~~~~~Il~~~Y~r~V~~~~~L~~Ye~Fs~~vYGE---t~~~~i~~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~g 196 (438)
T 3uwp_A 123 GLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGE---TSFDLVAQMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATN 196 (438)
T ss_dssp HHHHHHHHHHHHHHCSCGGGSCCCSSSCGGGGGG---THHHHHHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhcCCCHHHhcCcccCCCcccCC---CCHHHHHHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHCC
Confidence 567777777765 244321111 122344444444432 36789999999999999999964 7
Q ss_pred Ce-EEEEeCCHHHHHHHHhhhhccccc-CccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEeccccccc
Q 015966 212 FI-SQGNEFSYYMMICSSFILNHTETA-GEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVY 289 (397)
Q Consensus 212 f~-V~GnD~S~~ML~~s~fiLn~~~~~-~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely 289 (397)
.. |+|+|+|..|+..|+-......+. ..+ ++. ..++.+++|||.++.
T Consensus 197 ~~kVvGIDiS~~~lelAr~n~e~frkr~~~~--------------------Gl~-----------~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 197 CKHHYGVEKADIPAKYAETMDREFRKWMKWY--------------------GKK-----------HAEYTLERGDFLSEE 245 (438)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHHHHHHH--------------------TBC-----------CCEEEEEECCTTSHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh--------------------CCC-----------CCCeEEEECcccCCc
Confidence 76 999999999999887433211000 000 000 124889999998853
Q ss_pred CCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015966 290 SDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (397)
Q Consensus 290 ~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~ 333 (397)
. +..-..||+|++..++- .+++...|..|+++|||||++|..
T Consensus 246 ~-~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 246 W-RERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp H-HHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEES
T ss_pred c-ccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEe
Confidence 1 10014699998754332 357888999999999999999963
No 144
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.24 E-value=2.1e-11 Score=106.35 Aligned_cols=103 Identities=19% Similarity=0.093 Sum_probs=73.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+... .
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~------ 91 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAIT--------------------------K------ 91 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH--------------------------T------
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHh--------------------------C------
Confidence 456999999999999999999984 8999999999998776332110 0
Q ss_pred CCCCCCCCCcceeEecccccccC-CCCCCCCccEEEEee--ccCChhhHHHHHHHH--HHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCF--FIDTAHNIVEYIEII--SRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~-~~~~~~~fD~VvT~F--FIDta~Ni~~yi~~I--~~~LKPGG~wIN 332 (397)
...++.++.+|+.+... .+...++||+|++.. .... ..+.++.+ .++|||||+++-
T Consensus 92 ------~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~---~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 92 ------EPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQE---IVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp ------CGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCC---HHHHHHHHHHTTCEEEEEEEEE
T ss_pred ------CCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchh---HHHHHHHHHHhcccCCCCEEEE
Confidence 01236788999877421 001147899999763 3233 34556666 889999999984
No 145
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.24 E-value=1.8e-10 Score=126.02 Aligned_cols=149 Identities=13% Similarity=0.134 Sum_probs=100.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|+++..||++| ..|+|+|+|..|+..|+-.++...... .. .
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAk-----------------r~-----g-- 776 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKE-----------------AC-----N-- 776 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTT-----------------CS-----S--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchh-----------------hc-----C--
Confidence 56799999999999999999998 899999999999998864332110000 00 0
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEEEecCCc-ch--h
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLL-YH--F 340 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wIN~GPLl-Yh--~ 340 (397)
..++.+++||+.++. ...+.||+|++...|... +....+++.++++||||+++|. .|.. |. |
T Consensus 777 ---------l~nVefiqGDa~dLp---~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIIS-TPN~eyN~lF 843 (950)
T 3htx_A 777 ---------VKSATLYDGSILEFD---SRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVS-TPNYEFNTIL 843 (950)
T ss_dssp ---------CSEEEEEESCTTSCC---TTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEE-ECBGGGHHHH
T ss_pred ---------CCceEEEECchHhCC---cccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEE-ecCchhhhhh
Confidence 124788999998753 245899999987654433 2355799999999999944443 2221 10 1
Q ss_pred hh-----------c--cC--CCCCccccCCHHHHHH----HHHhCCCEEEEEe
Q 015966 341 AD-----------L--YG--QEDEMSIELSLEDVKR----VALHYGFEFEKEK 374 (397)
Q Consensus 341 ~d-----------~--~g--~~~~~~ieLS~EEl~~----ll~~~GFeii~e~ 374 (397)
.. . .+ ..+...++.+.+|++. ++.+.||++.-..
T Consensus 844 ~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvG 896 (950)
T 3htx_A 844 QRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSG 896 (950)
T ss_dssp TCC------------CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhcccccccccccccccccccccCcceeecHHHHHHHHHHHHHhcCcEEEEEc
Confidence 10 0 00 0112356789999988 7788899887654
No 146
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.23 E-value=5.2e-11 Score=110.40 Aligned_cols=136 Identities=13% Similarity=0.020 Sum_probs=77.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHHHHHHHhhhhcccccCccc--------cccccccccCCCC--
Q 015966 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFILNHTETAGEWN--------IYPWIHSNCNSLS-- 254 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~--------IyPfi~~~Sn~~s-- 254 (397)
++.+|||+|||+|.++..++++ +..|+|+|+|..|+..|+..+...... ... .|-..-..+...+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPA-GLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHH-HHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhc-cccccchhhhhhhhhcccccchhhhh
Confidence 4579999999999999999987 678999999999999887433211000 000 0000000000000
Q ss_pred cccCcc-ccccCCCCCCCCCCCCcceeEecccccccCCC--CCCCCccEEEEee-cc--CC------hhhHHHHHHHHHH
Q 015966 255 DSDQLR-PVSIPDIHPASAGITEGFSMCGGDFVEVYSDP--SQVGAWDAVVTCF-FI--DT------AHNIVEYIEIISR 322 (397)
Q Consensus 255 ~~~qlr-~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~--~~~~~fD~VvT~F-FI--Dt------a~Ni~~yi~~I~~ 322 (397)
...+++ ..+..... -...+..+|+.+..... ...++||+|++.. |+ .. ......+++.+++
T Consensus 130 ~~~~v~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (250)
T 1o9g_A 130 AARRLRERLTAEGGA-------LPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLAS 202 (250)
T ss_dssp HHHHHHHHHHHTTSS-------CCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccccc-------cccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHH
Confidence 000000 00000000 00238889987743100 0134899999873 22 11 3556789999999
Q ss_pred hccCCcEEEE
Q 015966 323 ILKDGGVWIN 332 (397)
Q Consensus 323 ~LKPGG~wIN 332 (397)
+|||||+++-
T Consensus 203 ~LkpgG~l~~ 212 (250)
T 1o9g_A 203 ALPAHAVIAV 212 (250)
T ss_dssp HSCTTCEEEE
T ss_pred hcCCCcEEEE
Confidence 9999999995
No 147
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.23 E-value=2.7e-11 Score=121.96 Aligned_cols=118 Identities=19% Similarity=0.190 Sum_probs=87.1
Q ss_pred hHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccc
Q 015966 165 TERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIY 243 (397)
Q Consensus 165 ~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~Iy 243 (397)
..|..+|..-|..-...+ ++.+|||+|||+|-|+...|+.|. .|+|+|.|. |+..|+-+... +
T Consensus 65 ~~Rt~aY~~Ai~~~~~~~------~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~----n----- 128 (376)
T 4hc4_A 65 RVRTDAYRLGILRNWAAL------RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRF----N----- 128 (376)
T ss_dssp HHHHHHHHHHHHTTHHHH------TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHH----T-----
T ss_pred HHHHHHHHHHHHhCHHhc------CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHH----c-----
Confidence 456677765553222223 456899999999999999999997 699999995 88777654321 1
Q ss_pred cccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe---eccCChhhHHHHHHHH
Q 015966 244 PWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEII 320 (397)
Q Consensus 244 Pfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yi~~I 320 (397)
...+.+.++.||+.++-. .++||+||+- +++.....+..++...
T Consensus 129 -----------------------------~~~~~i~~i~~~~~~~~l----pe~~DvivsE~~~~~l~~e~~l~~~l~a~ 175 (376)
T 4hc4_A 129 -----------------------------GLEDRVHVLPGPVETVEL----PEQVDAIVSEWMGYGLLHESMLSSVLHAR 175 (376)
T ss_dssp -----------------------------TCTTTEEEEESCTTTCCC----SSCEEEEECCCCBTTBTTTCSHHHHHHHH
T ss_pred -----------------------------CCCceEEEEeeeeeeecC----CccccEEEeecccccccccchhhhHHHHH
Confidence 112347889999988743 3789999984 4555555577889999
Q ss_pred HHhccCCcEEE
Q 015966 321 SRILKDGGVWI 331 (397)
Q Consensus 321 ~~~LKPGG~wI 331 (397)
.++|||||++|
T Consensus 176 ~r~Lkp~G~~i 186 (376)
T 4hc4_A 176 TKWLKEGGLLL 186 (376)
T ss_dssp HHHEEEEEEEE
T ss_pred HhhCCCCceEC
Confidence 99999999999
No 148
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.23 E-value=6.8e-11 Score=107.00 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=78.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||++ |..|+|+|+|..|+..++..+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 106 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA------------------------------- 106 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4579999999999999999998 889999999999998776332110
Q ss_pred CCCCCCCCCCCcceeEecccccccCC-C-CCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCC
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSD-P-SQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPL 336 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~-~-~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPL 336 (397)
....++.++.||+.+.... + ...+.||+|+.... ..+...+++.+.++|||||++|--.++
T Consensus 107 -------~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 107 -------NLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred -------CCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 0112378889998764210 0 01257999975322 445679999999999999998854443
No 149
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.22 E-value=8.6e-11 Score=110.73 Aligned_cols=138 Identities=14% Similarity=0.074 Sum_probs=98.1
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 247 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~ 247 (397)
|+.-+..+.+.+.. .++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..++..+...
T Consensus 97 ~~~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------- 160 (277)
T 1o54_A 97 YPKDSSFIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW------------- 160 (277)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT-------------
T ss_pred CHHHHHHHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-------------
Confidence 44444555555432 25679999999999999999998 579999999999998776322110
Q ss_pred cccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCC
Q 015966 248 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 248 ~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPG 327 (397)
. ...++.+..+|+.+... .+.||+|+.. . ++..++++.+.++||||
T Consensus 161 -------------~------------~~~~v~~~~~d~~~~~~----~~~~D~V~~~----~-~~~~~~l~~~~~~L~pg 206 (277)
T 1o54_A 161 -------------G------------LIERVTIKVRDISEGFD----EKDVDALFLD----V-PDPWNYIDKCWEALKGG 206 (277)
T ss_dssp -------------T------------CGGGEEEECCCGGGCCS----CCSEEEEEEC----C-SCGGGTHHHHHHHEEEE
T ss_pred -------------C------------CCCCEEEEECCHHHccc----CCccCEEEEC----C-cCHHHHHHHHHHHcCCC
Confidence 0 01236778899887632 4689999873 2 34457899999999999
Q ss_pred cEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 328 G~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
|+++-..|.. -..+++.+.+++.||..++..
T Consensus 207 G~l~~~~~~~----------------~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 207 GRFATVCPTT----------------NQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp EEEEEEESSH----------------HHHHHHHHHHHHSSEEEEEEE
T ss_pred CEEEEEeCCH----------------HHHHHHHHHHHHCCCceeEEE
Confidence 9999643321 124677788888999987743
No 150
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.22 E-value=1.9e-11 Score=113.13 Aligned_cols=148 Identities=11% Similarity=0.064 Sum_probs=87.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+..+...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------------------------- 112 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-------------------------------- 112 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 4679999999999999999987 789999999999998877332110
Q ss_pred CCCCCCCCCCcceeEeccccc-ccC-CCCC-CCCccEEEEe--eccCC--h-----hh------HHHHHHHHHHhccCCc
Q 015966 267 IHPASAGITEGFSMCGGDFVE-VYS-DPSQ-VGAWDAVVTC--FFIDT--A-----HN------IVEYIEIISRILKDGG 328 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~e-ly~-~~~~-~~~fD~VvT~--FFIDt--a-----~N------i~~yi~~I~~~LKPGG 328 (397)
....++.++.+|+.+ +.. .+.. +++||+|++. |+-.. . .+ ....+..++++|||||
T Consensus 113 ------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG 186 (254)
T 2h00_A 113 ------NLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG 186 (254)
T ss_dssp ------TCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHT
T ss_pred ------CCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC
Confidence 011236788888665 221 1111 2589999987 43211 0 11 1245678899999999
Q ss_pred EEEEecCCc---chhhhccCC-CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 329 VWINLGPLL---YHFADLYGQ-EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 329 ~wIN~GPLl---Yh~~d~~g~-~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.+.-+-+++ +.+-...+- ..+....-+.+++.+++++.||+.++..
T Consensus 187 ~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 187 ELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 776321110 000000000 0001122356899999999999877643
No 151
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.22 E-value=2.9e-11 Score=111.64 Aligned_cols=104 Identities=20% Similarity=0.158 Sum_probs=74.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+..++-... .. .
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~---~~-----------------------~----- 82 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAH---EE-----------------------G----- 82 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HT-----------------------T-----
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHH---Hh-----------------------C-----
Confidence 46799999999999999999984 569999999999987662211 00 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC---hhhH------HHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT---AHNI------VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt---a~Ni------~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|+.++......+++||.|+..| .|. .... ..+++.++++|||||+++-
T Consensus 83 --------l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~-~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i 148 (218)
T 3dxy_A 83 --------LSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF-PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHM 148 (218)
T ss_dssp --------CSSEEEECSCHHHHHHHHSCTTCEEEEEEES-CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEECCHHHHHHHHcCCCChheEEEeC-CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEE
Confidence 0237889999887521001258999997654 222 1111 1599999999999999883
No 152
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.22 E-value=6.3e-11 Score=107.54 Aligned_cols=110 Identities=19% Similarity=0.078 Sum_probs=81.9
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
..+.+++.+.+.+.. .++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++-.+..
T Consensus 54 ~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~---------------- 114 (231)
T 1vbf_A 54 TALNLGIFMLDELDL---HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSY---------------- 114 (231)
T ss_dssp CCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTT----------------
T ss_pred CCHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhh----------------
Confidence 345667777766642 2567999999999999999999999999999999999877632210
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcE
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~ 329 (397)
.+ ++.++.+|+.+... ..++||+|++...+.... +.+.++|||||+
T Consensus 115 ------------------------~~-~v~~~~~d~~~~~~---~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~ 160 (231)
T 1vbf_A 115 ------------------------YN-NIKLILGDGTLGYE---EEKPYDRVVVWATAPTLL------CKPYEQLKEGGI 160 (231)
T ss_dssp ------------------------CS-SEEEEESCGGGCCG---GGCCEEEEEESSBBSSCC------HHHHHTEEEEEE
T ss_pred ------------------------cC-CeEEEECCcccccc---cCCCccEEEECCcHHHHH------HHHHHHcCCCcE
Confidence 00 26778899876322 247899999876554322 468899999999
Q ss_pred EEE
Q 015966 330 WIN 332 (397)
Q Consensus 330 wIN 332 (397)
+|-
T Consensus 161 l~~ 163 (231)
T 1vbf_A 161 MIL 163 (231)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 153
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.22 E-value=4.2e-11 Score=117.75 Aligned_cols=100 Identities=18% Similarity=0.162 Sum_probs=75.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|++|. .|+|+|.|. |+..++-.+...
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~--------------------------------- 95 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN--------------------------------- 95 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT---------------------------------
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHc---------------------------------
Confidence 567999999999999999999987 899999995 876665332110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeec--cCChhhHHHHHHHHHHhccCCcEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FF--IDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
....++.++.+|+.++-. .++||+|++... .-..+++.+.+..+.++|||||++|
T Consensus 96 -----~l~~~v~~~~~d~~~~~~----~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 96 -----NLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp -----TCTTTEEEEESCTTTCCC----SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEE
T ss_pred -----CCCCcEEEEEcchhhCCC----CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEE
Confidence 011237889999887632 368999998632 1123457788889999999999998
No 154
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.22 E-value=4.8e-11 Score=107.97 Aligned_cols=101 Identities=15% Similarity=0.003 Sum_probs=73.3
Q ss_pred CCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
+.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+... .
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~--------------------------~------- 101 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL--------------------------K------- 101 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 46899999999999999999986 8999999999998877322100 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHH--hccCCcEEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR--ILKDGGVWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~--~LKPGG~wIN 332 (397)
. .++.++.+|+.++.. ...++||+|++..-.. ..+..+.++.+.+ +|||||+++-
T Consensus 102 -----~-~~v~~~~~D~~~~~~--~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 102 -----A-GNARVVNSNAMSFLA--QKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp -----C-CSEEEECSCHHHHHS--SCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----C-CcEEEEECCHHHHHh--hcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEE
Confidence 0 136788999877432 2346899998753111 2345577788865 5999999983
No 155
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=4.2e-11 Score=108.32 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=81.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
++..+.... ++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++-.+...
T Consensus 55 ~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---------------- 112 (225)
T 3tr6_A 55 LLALLVKLM------QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA---------------- 112 (225)
T ss_dssp HHHHHHHHH------TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhh------CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC----------------
Confidence 555555433 3569999999999999999998 889999999999998776433210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCC---CCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCC
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~---~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPG 327 (397)
....++.++.+|+.+.... ....++||+|+... ...+...+++.+.++||||
T Consensus 113 ----------------------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~~L~pg 167 (225)
T 3tr6_A 113 ----------------------GLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDA---DKANTDLYYEESLKLLREG 167 (225)
T ss_dssp ----------------------TCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEE
T ss_pred ----------------------CCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECC---CHHHHHHHHHHHHHhcCCC
Confidence 0112377888998664320 00117899997422 3456788999999999999
Q ss_pred cEEEE
Q 015966 328 GVWIN 332 (397)
Q Consensus 328 G~wIN 332 (397)
|++|-
T Consensus 168 G~lv~ 172 (225)
T 3tr6_A 168 GLIAV 172 (225)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99994
No 156
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.21 E-value=4.8e-12 Score=123.92 Aligned_cols=114 Identities=15% Similarity=0.084 Sum_probs=82.8
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
....|.+.++.. .+.+|||+|||+|.++..++++| ..|+|+|+|..|+..++-.+.. +
T Consensus 184 ~~~~ll~~l~~~---~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~----~------------- 243 (343)
T 2pjd_A 184 GSQLLLSTLTPH---TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA----N------------- 243 (343)
T ss_dssp HHHHHHHHSCTT---CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH----T-------------
T ss_pred HHHHHHHhcCcC---CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----h-------------
Confidence 445555555322 35689999999999999999998 5899999999999877632210 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC-----ChhhHHHHHHHHHHhccC
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID-----TAHNIVEYIEIISRILKD 326 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID-----ta~Ni~~yi~~I~~~LKP 326 (397)
.+ ...++.+|+.+.. .++||+|++..-+. ...+...+++.++++|||
T Consensus 244 ---------~~--------------~~~~~~~d~~~~~-----~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp 295 (343)
T 2pjd_A 244 ---------GV--------------EGEVFASNVFSEV-----KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS 295 (343)
T ss_dssp ---------TC--------------CCEEEECSTTTTC-----CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE
T ss_pred ---------CC--------------CCEEEEccccccc-----cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCC
Confidence 00 1345778876632 47899999875332 345578899999999999
Q ss_pred CcEEEEecC
Q 015966 327 GGVWINLGP 335 (397)
Q Consensus 327 GG~wIN~GP 335 (397)
||.++-+.+
T Consensus 296 gG~l~i~~~ 304 (343)
T 2pjd_A 296 GGELRIVAN 304 (343)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEc
Confidence 999996544
No 157
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.21 E-value=6e-11 Score=109.74 Aligned_cols=121 Identities=12% Similarity=0.105 Sum_probs=86.4
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.++..|....+. +++.+||++|||+|..+..||+. |..|+|+|+|..|+..|+-.+...
T Consensus 43 ~~l~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------- 104 (221)
T 3dr5_A 43 QLLTTLAATTNG---NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--------------- 104 (221)
T ss_dssp HHHHHHHHHSCC---TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhhCC---CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 466666665432 23569999999999999999985 689999999999998776332211
Q ss_pred cCCCCcccCccccccCCCCCCCCCCC-CcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCc
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGIT-EGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 328 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~-~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG 328 (397)
... .++.++.||+.++... ...++||+|+... ...+..+|++.+.++|||||
T Consensus 105 -----------------------g~~~~~i~~~~gda~~~l~~-~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG 157 (221)
T 3dr5_A 105 -----------------------GYSPSRVRFLLSRPLDVMSR-LANDSYQLVFGQV---SPMDLKALVDAAWPLLRRGG 157 (221)
T ss_dssp -----------------------TCCGGGEEEECSCHHHHGGG-SCTTCEEEEEECC---CTTTHHHHHHHHHHHEEEEE
T ss_pred -----------------------CCCcCcEEEEEcCHHHHHHH-hcCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCCc
Confidence 011 2478899998876421 1147899996432 23457789999999999999
Q ss_pred EEEEecCCcch
Q 015966 329 VWINLGPLLYH 339 (397)
Q Consensus 329 ~wIN~GPLlYh 339 (397)
++|- ...+|+
T Consensus 158 ~lv~-dn~~~~ 167 (221)
T 3dr5_A 158 ALVL-ADALLD 167 (221)
T ss_dssp EEEE-TTTTGG
T ss_pred EEEE-eCCCCC
Confidence 9994 334453
No 158
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.20 E-value=2.8e-10 Score=112.58 Aligned_cols=145 Identities=17% Similarity=0.208 Sum_probs=98.8
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
...+.+.++.. .+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++ .
T Consensus 191 ~~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-------~---------------- 244 (368)
T 3reo_A 191 MKKILEMYNGF--EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-------A---------------- 244 (368)
T ss_dssp HHHHHTTCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-------C----------------
T ss_pred HHHHHHhcccc--cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-------h----------------
Confidence 34455555421 25679999999999999999996 568999999 87863111 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~w 330 (397)
..++.++.|||.+- .| .+ |+|+..+.+. ..++....|+.++++|||||++
T Consensus 245 ----------------------~~~v~~~~~d~~~~--~p--~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l 296 (368)
T 3reo_A 245 ----------------------FSGVEHLGGDMFDG--VP--KG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKV 296 (368)
T ss_dssp ----------------------CTTEEEEECCTTTC--CC--CC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEE
T ss_pred ----------------------cCCCEEEecCCCCC--CC--CC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEE
Confidence 01378899999862 22 23 9998877664 4556778999999999999998
Q ss_pred EEecCCcch------------hhh--ccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 331 INLGPLLYH------------FAD--LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 331 IN~GPLlYh------------~~d--~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
|-.-..+-. ..+ ... ......+.|.+|++++++++||++++..
T Consensus 297 ~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 297 IVAEYILPPSPDPSIATKVVIHTDALMLA-YNPGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp EEEECCCCSSCCCCHHHHHHHHHHHHHHH-HSSBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccCCCCCCchhhhHHHhhhHHHHh-hcCCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 853221100 000 000 0001346799999999999999998854
No 159
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.20 E-value=2.3e-10 Score=102.12 Aligned_cols=120 Identities=18% Similarity=0.062 Sum_probs=87.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+... +
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~------ 96 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--------------------------K------ 96 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--------------------------T------
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C------
Confidence 567999999999999999999987 5999999999998776321100 0
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
. ++.++.+|+.++ . ++||+|++. |+.........+++.+.++| ||+++.. . .
T Consensus 97 ------~--~~~~~~~d~~~~-~-----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~----~--~---- 150 (207)
T 1wy7_A 97 ------G--KFKVFIGDVSEF-N-----SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH----L--A---- 150 (207)
T ss_dssp ------T--SEEEEESCGGGC-C-----CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE----E--C----
T ss_pred ------C--CEEEEECchHHc-C-----CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE----e--C----
Confidence 0 267889998874 2 489999987 44433344568899999999 7776632 0 0
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
-.-+.+.+.+++++.||++..
T Consensus 151 ------~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 151 ------KPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp ------CHHHHHHHHHHHHHTTEEEEE
T ss_pred ------CcCCHHHHHHHHHHCCCeEEE
Confidence 012356678888999998876
No 160
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.18 E-value=3.7e-11 Score=102.08 Aligned_cols=119 Identities=13% Similarity=0.035 Sum_probs=81.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|.++..++++ +..++|+|+|. |+..
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------------------------------- 61 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------------------------------- 61 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------------------------------
Confidence 5679999999999999999998 47999999999 7410
Q ss_pred CCCCCCCCCCCcceeEecccccccC---CC--CCCCCccEEEEeeccCChhhH-----------HHHHHHHHHhccCCcE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYS---DP--SQVGAWDAVVTCFFIDTAHNI-----------VEYIEIISRILKDGGV 329 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~---~~--~~~~~fD~VvT~FFIDta~Ni-----------~~yi~~I~~~LKPGG~ 329 (397)
.++.+..+|+.+... .+ ...++||+|++...+....+. ..+++.+.++|||||+
T Consensus 62 ----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~ 131 (180)
T 1ej0_A 62 ----------VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS 131 (180)
T ss_dssp ----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ----------CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcE
Confidence 015567778766410 00 124789999985433221111 5889999999999999
Q ss_pred EEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 330 WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 330 wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+|-..+. .-..+++...+... |+.+...
T Consensus 132 l~~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~ 159 (180)
T 1ej0_A 132 FVVKVFQ----------------GEGFDEYLREIRSL-FTKVKVR 159 (180)
T ss_dssp EEEEEES----------------STTHHHHHHHHHHH-EEEEEEE
T ss_pred EEEEEec----------------CCcHHHHHHHHHHh-hhhEEee
Confidence 9952221 12346777777774 7766543
No 161
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.18 E-value=3.6e-10 Score=110.76 Aligned_cols=138 Identities=15% Similarity=0.109 Sum_probs=95.3
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
+...+...... .++.+|||||||+|.++.++|..+ ..|+|+|+|..|+..|+-.+...
T Consensus 191 la~~l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~---------------- 251 (354)
T 3tma_A 191 LAQALLRLADA---RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS---------------- 251 (354)
T ss_dssp HHHHHHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc----------------
Confidence 44444444332 256799999999999999999986 89999999999998877332110
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--ec--cCChhh----HHHHHHHHHH
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF--IDTAHN----IVEYIEIISR 322 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FF--IDta~N----i~~yi~~I~~ 322 (397)
... ++.+..+|+.++.. ..+.||+|++. |. +....+ ...+++.+.+
T Consensus 252 ----------------------g~~-~i~~~~~D~~~~~~---~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~ 305 (354)
T 3tma_A 252 ----------------------GLS-WIRFLRADARHLPR---FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALA 305 (354)
T ss_dssp ----------------------TCT-TCEEEECCGGGGGG---TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCC-ceEEEeCChhhCcc---ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHH
Confidence 011 37889999988643 23568999995 32 222222 2568899999
Q ss_pred hccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 015966 323 ILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (397)
Q Consensus 323 ~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i 376 (397)
+|||||.++-+- -..+.++.+++ .||+..+.+.+
T Consensus 306 ~LkpgG~l~i~t-------------------~~~~~~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 306 LLPPGGRVALLT-------------------LRPALLKRALP-PGFALRHARVV 339 (354)
T ss_dssp TSCTTCEEEEEE-------------------SCHHHHHHHCC-TTEEEEEEEEC
T ss_pred hcCCCcEEEEEe-------------------CCHHHHHHHhh-cCcEEEEEEEE
Confidence 999999998521 12344555666 89999887654
No 162
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.17 E-value=2e-10 Score=108.31 Aligned_cols=132 Identities=14% Similarity=0.029 Sum_probs=88.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+..|+..+.... + .
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~---------------~-----~--------- 86 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPD---------------N-----A--------- 86 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGG---------------G-----T---------
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhh---------------h-----C---------
Confidence 56799999999999999999995 789999999999987763211000 0 0
Q ss_pred CCCCCCCCCCcceeEecccccccC----CCCCCCCccEEEEe--eccCC----------------hhhHHHHHHHHHHhc
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYS----DPSQVGAWDAVVTC--FFIDT----------------AHNIVEYIEIISRIL 324 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~----~~~~~~~fD~VvT~--FFIDt----------------a~Ni~~yi~~I~~~L 324 (397)
...+++.++.+|+.++.. .+...++||+|++. ||... ..++.++++.+.++|
T Consensus 87 ------~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L 160 (260)
T 2ozv_A 87 ------AFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIM 160 (260)
T ss_dssp ------TTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHE
T ss_pred ------CCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHc
Confidence 011237789999887621 00124789999987 54321 123678999999999
Q ss_pred cCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 325 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 325 KPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
||||+++-+-|- -..+++..++++. |...+.
T Consensus 161 kpgG~l~~~~~~-----------------~~~~~~~~~l~~~-~~~~~i 191 (260)
T 2ozv_A 161 VSGGQLSLISRP-----------------QSVAEIIAACGSR-FGGLEI 191 (260)
T ss_dssp EEEEEEEEEECG-----------------GGHHHHHHHHTTT-EEEEEE
T ss_pred CCCCEEEEEEcH-----------------HHHHHHHHHHHhc-CCceEE
Confidence 999999842110 1346777888764 765553
No 163
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.17 E-value=3.3e-11 Score=111.93 Aligned_cols=122 Identities=14% Similarity=0.056 Sum_probs=90.0
Q ss_pred hhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccc
Q 015966 164 KTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWN 241 (397)
Q Consensus 164 ~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~ 241 (397)
-.||-.+|.++-..+..+++ +..+|||+|||+|-+|..++.. +..+.|+|+|..|+.+++-.+...
T Consensus 29 TReRLp~ld~fY~~~~~~l~-----~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~------- 96 (200)
T 3fzg_A 29 TNERVATLNDFYTYVFGNIK-----HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL------- 96 (200)
T ss_dssp HHTTGGGHHHHHHHHHHHSC-----CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS-------
T ss_pred HHHHhHhHHHHHHHHHhhcC-----CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc-------
Confidence 45777788888888888775 4669999999999999999888 789999999999999888443211
Q ss_pred cccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHH
Q 015966 242 IYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIIS 321 (397)
Q Consensus 242 IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~ 321 (397)
+ ...++.+ +|+.+.. ..+.||+|+..-.|...++....+..|+
T Consensus 97 -------------------g------------~~~~v~~--~d~~~~~----~~~~~DvVLa~k~LHlL~~~~~al~~v~ 139 (200)
T 3fzg_A 97 -------------------K------------TTIKYRF--LNKESDV----YKGTYDVVFLLKMLPVLKQQDVNILDFL 139 (200)
T ss_dssp -------------------C------------CSSEEEE--ECCHHHH----TTSEEEEEEEETCHHHHHHTTCCHHHHH
T ss_pred -------------------C------------CCccEEE--ecccccC----CCCCcChhhHhhHHHhhhhhHHHHHHHH
Confidence 0 0111333 5655432 2478999998755444445556777999
Q ss_pred HhccCCcEEEEec
Q 015966 322 RILKDGGVWINLG 334 (397)
Q Consensus 322 ~~LKPGG~wIN~G 334 (397)
+.|||||++|++.
T Consensus 140 ~~L~pggvfISfp 152 (200)
T 3fzg_A 140 QLFHTQNFVISFP 152 (200)
T ss_dssp HTCEEEEEEEEEE
T ss_pred HHhCCCCEEEEeC
Confidence 9999999999863
No 164
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.17 E-value=2.6e-10 Score=112.70 Aligned_cols=146 Identities=16% Similarity=0.197 Sum_probs=99.6
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
...+.+.++.. .+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++ .
T Consensus 189 ~~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-------~---------------- 242 (364)
T 3p9c_A 189 TKKLLELYHGF--EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-------Q---------------- 242 (364)
T ss_dssp HHHHHHHCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-------C----------------
T ss_pred HHHHHHhcccc--cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-------h----------------
Confidence 34455555522 25679999999999999999986 568999999 77763111 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~w 330 (397)
..++.++.|||.+- .| .+ |+|+..+.+. ..++....|+.++++|||||++
T Consensus 243 ----------------------~~~v~~~~~D~~~~--~p--~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l 294 (364)
T 3p9c_A 243 ----------------------FPGVTHVGGDMFKE--VP--SG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKV 294 (364)
T ss_dssp ----------------------CTTEEEEECCTTTC--CC--CC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEE
T ss_pred ----------------------cCCeEEEeCCcCCC--CC--CC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 01378899999872 22 23 9999877664 4466789999999999999999
Q ss_pred EEecCCc---------ch---hhh--ccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 331 INLGPLL---------YH---FAD--LYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 331 IN~GPLl---------Yh---~~d--~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
|-.-..+ +. ..+ ... ......+.|.+|++++++++||++++...
T Consensus 295 ~i~e~~~~~~~~~~~~~~~~~~~d~~m~~-~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 295 VLVQCILPVNPEANPSSQGVFHVDMIMLA-HNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp EEEECCBCSSCCSSHHHHHHHHHHHHHHH-HCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEeccCCCCCcchhhhhHHHhHHHHHh-cccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 8522111 00 000 000 00013468999999999999999988653
No 165
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.16 E-value=9e-11 Score=105.67 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=75.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
+..+|||+|||+|..+..||+. |..|+|+|+|..|+..++-.+... .
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~---- 105 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN--------------------------G---- 105 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------S----
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--------------------------C----
Confidence 3569999999999999999988 789999999999998776332110 0
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
...++.++.+|+.++.. ...+ ||+|+...- ..+...+++.+.++|||||++|-
T Consensus 106 --------~~~~v~~~~~d~~~~~~--~~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 106 --------LIDRVELQVGDPLGIAA--GQRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp --------GGGGEEEEESCHHHHHT--TCCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEE
T ss_pred --------CCceEEEEEecHHHHhc--cCCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEE
Confidence 01236788899877532 1235 999986532 34567899999999999999994
No 166
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.16 E-value=2.6e-10 Score=112.26 Aligned_cols=134 Identities=13% Similarity=0.005 Sum_probs=91.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..+|+.|..|+|+|+|..|+..++..+... .+.
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~--------------------------gl~----- 201 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLA--------------------------GLE----- 201 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH--------------------------TCT-----
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc--------------------------CCC-----
Confidence 4569999999999999999999999999999999998776322100 000
Q ss_pred CCCCCCCCcceeEecccccccCC-CCCCCCccEEEEe---eccC-------ChhhHHHHHHHHHHhccCCcEEEE-ecCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC---FFID-------TAHNIVEYIEIISRILKDGGVWIN-LGPL 336 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~-~~~~~~fD~VvT~---FFID-------ta~Ni~~yi~~I~~~LKPGG~wIN-~GPL 336 (397)
..++.++.+|+.++... ....++||+|++. |-.. ...++.++++.+.++|||||+++- ...
T Consensus 202 ------~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~- 274 (332)
T 2igt_A 202 ------QAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY- 274 (332)
T ss_dssp ------TSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC-
T ss_pred ------ccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC-
Confidence 01267888998775310 0013689999984 3222 234567889999999999999652 111
Q ss_pred cchhhhccCCCCCccccCCHHHHHHHHH----hCCCEEEEEe
Q 015966 337 LYHFADLYGQEDEMSIELSLEDVKRVAL----HYGFEFEKEK 374 (397)
Q Consensus 337 lYh~~d~~g~~~~~~ieLS~EEl~~ll~----~~GFeii~e~ 374 (397)
+..++.+++.+++. +.|+++....
T Consensus 275 --------------~~~~~~~~~~~~l~~a~~~~g~~v~~~e 302 (332)
T 2igt_A 275 --------------SIRASFYSMHELMRETMRGAGGVVASGE 302 (332)
T ss_dssp --------------CTTSCHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred --------------CCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 12345555555555 7899987543
No 167
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.16 E-value=2.6e-11 Score=121.31 Aligned_cols=116 Identities=12% Similarity=0.012 Sum_probs=81.7
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 176 EELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 176 ~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
..|.+.++.. .+.+|||+|||+|.++..+|++ |..|+|+|+|..|+..++..+...
T Consensus 212 ~~ll~~l~~~---~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n------------------- 269 (375)
T 4dcm_A 212 RFFMQHLPEN---LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN------------------- 269 (375)
T ss_dssp HHHHHTCCCS---CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-------------------
T ss_pred HHHHHhCccc---CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc-------------------
Confidence 3455555532 4579999999999999999999 689999999999998777332110
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee--c----cCChhhHHHHHHHHHHhccCC
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--F----IDTAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F--F----IDta~Ni~~yi~~I~~~LKPG 327 (397)
.+ ++ ..++.+..+|+.+.. ..++||+|++.. + +.. ....++|+.++++||||
T Consensus 270 -------gl--~~--------~~~v~~~~~D~~~~~----~~~~fD~Ii~nppfh~~~~~~~-~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 270 -------MP--EA--------LDRCEFMINNALSGV----EPFRFNAVLCNPPFHQQHALTD-NVAWEMFHHARRCLKIN 327 (375)
T ss_dssp -------CG--GG--------GGGEEEEECSTTTTC----CTTCEEEEEECCCC-------C-CHHHHHHHHHHHHEEEE
T ss_pred -------CC--Cc--------CceEEEEechhhccC----CCCCeeEEEECCCcccCcccCH-HHHHHHHHHHHHhCCCC
Confidence 00 00 012677889987743 257899999863 2 111 22447899999999999
Q ss_pred cEEEEecC
Q 015966 328 GVWINLGP 335 (397)
Q Consensus 328 G~wIN~GP 335 (397)
|+++-+++
T Consensus 328 G~l~iv~n 335 (375)
T 4dcm_A 328 GELYIVAN 335 (375)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEE
Confidence 99996543
No 168
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.16 E-value=2.7e-10 Score=104.03 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=93.9
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
|+..+..+.+.+.. .++.+|||+|||+|.++..+++++..|+|+|+|..|+..++..+...
T Consensus 76 ~~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---------------- 136 (248)
T 2yvl_A 76 YPKDSFYIALKLNL---NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKF---------------- 136 (248)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHT----------------
T ss_pred cchhHHHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc----------------
Confidence 34445555555532 25679999999999999999999999999999999998776332100
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEE
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 330 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~w 330 (397)
. ...++.+..+|+.+... ..+.||+|+.. ..+...+++.+.++|||||++
T Consensus 137 ----------~------------~~~~~~~~~~d~~~~~~---~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l 186 (248)
T 2yvl_A 137 ----------N------------LGKNVKFFNVDFKDAEV---PEGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPV 186 (248)
T ss_dssp ----------T------------CCTTEEEECSCTTTSCC---CTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEE
T ss_pred ----------C------------CCCcEEEEEcChhhccc---CCCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEE
Confidence 0 01236778888877531 14689999863 224457899999999999999
Q ss_pred EEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 331 INLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 331 IN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
+-..|.. -..+++.+++++. |..++
T Consensus 187 ~~~~~~~----------------~~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 187 GFLLPTA----------------NQVIKLLESIENY-FGNLE 211 (248)
T ss_dssp EEEESSH----------------HHHHHHHHHSTTT-EEEEE
T ss_pred EEEeCCH----------------HHHHHHHHHHHhh-CCcce
Confidence 9643321 1234666667666 77655
No 169
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.16 E-value=7.4e-10 Score=104.33 Aligned_cols=134 Identities=14% Similarity=0.089 Sum_probs=99.5
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
|+.|.++++ ++.+|||+|||+|.++..+|++|- .|+|+|++..++..|+--+.. +
T Consensus 6 L~~l~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~----~-------------- 62 (225)
T 3kr9_A 6 LELVASFVS-----QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEA----H-------------- 62 (225)
T ss_dssp HHHHHTTSC-----TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 455666654 457999999999999999999985 699999999999888732211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
...+++.+..||..+.... ...||+|+.+=- -..-+.+.++...+.|+|||++|-
T Consensus 63 --------------------gl~~~i~~~~~d~l~~l~~---~~~~D~IviaG~--Gg~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 63 --------------------GLKEKIQVRLANGLAAFEE---TDQVSVITIAGM--GGRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp --------------------TCTTTEEEEECSGGGGCCG---GGCCCEEEEEEE--CHHHHHHHHHHTGGGCTTCCEEEE
T ss_pred --------------------CCCceEEEEECchhhhccc---CcCCCEEEEcCC--ChHHHHHHHHHHHHHhCCCCEEEE
Confidence 1112478899998764321 126999886532 233467889999999999999994
Q ss_pred ecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 333 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 333 ~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
-| . -..+.+++.+.+.||+++.|.
T Consensus 118 -q~----------------~-~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 118 -QP----------------N-NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp -EE----------------S-SCHHHHHHHHHHTTEEEEEEE
T ss_pred -EC----------------C-CCHHHHHHHHHHCCCEEEEEE
Confidence 22 1 357899999999999999975
No 170
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.15 E-value=6e-10 Score=105.35 Aligned_cols=134 Identities=13% Similarity=0.162 Sum_probs=100.6
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
|+.|.++++ ++.+|||+|||+|.++..||++|- .|+|+|+|..|+..|+--+.. +
T Consensus 12 L~~i~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~----~-------------- 68 (230)
T 3lec_A 12 LQKVANYVP-----KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSE----H-------------- 68 (230)
T ss_dssp HHHHHTTSC-----TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 455666664 567999999999999999999985 599999999999988732211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
...+++.+..||..+... ..+.||+|+.+=-. +.-|.+.++.....|+++|.||-
T Consensus 69 --------------------gl~~~I~~~~gD~l~~~~---~~~~~D~IviaGmG--g~lI~~IL~~~~~~l~~~~~lIl 123 (230)
T 3lec_A 69 --------------------GLTSKIDVRLANGLSAFE---EADNIDTITICGMG--GRLIADILNNDIDKLQHVKTLVL 123 (230)
T ss_dssp --------------------TCTTTEEEEECSGGGGCC---GGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEE
T ss_pred --------------------CCCCcEEEEECchhhccc---cccccCEEEEeCCc--hHHHHHHHHHHHHHhCcCCEEEE
Confidence 112347889999887643 12379998764322 24477889999999999999994
Q ss_pred ecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 333 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 333 ~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.|. ...+++++.+.+.||++++|.
T Consensus 124 -qp~-----------------~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 124 -QPN-----------------NREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp -EES-----------------SCHHHHHHHHHHTTEEEEEEE
T ss_pred -ECC-----------------CChHHHHHHHHHCCCEEEEEE
Confidence 221 347899999999999999976
No 171
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.15 E-value=4.1e-10 Score=109.89 Aligned_cols=140 Identities=11% Similarity=0.112 Sum_probs=92.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++..|+++. ..++++|++. |+. + ... . ..
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~---~~~---~----------------------~~---- 228 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--R---HRL---D----------------------AP---- 228 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--T---CCC---C----------------------CG----
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--c---ccc---c----------------------cc----
Confidence 56799999999999999999964 5688999954 432 1 000 0 00
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEEEecCCcch-----
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYH----- 339 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh----- 339 (397)
....++.+..+||.+. . . .||+|+....+... +.....|+.++++|||||++|-.-+..-.
T Consensus 229 ------~~~~~v~~~~~d~~~~--~---p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~ 296 (348)
T 3lst_A 229 ------DVAGRWKVVEGDFLRE--V---P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH 296 (348)
T ss_dssp ------GGTTSEEEEECCTTTC--C---C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC
T ss_pred ------CCCCCeEEEecCCCCC--C---C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc
Confidence 1123488999998732 1 2 89999987655432 33479999999999999999853221100
Q ss_pred ---hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 340 ---FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 340 ---~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
+.+..-.......+.|.+|++++++++||++++...
T Consensus 297 ~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 297 QSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 000000000012367999999999999999988654
No 172
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.14 E-value=7.9e-11 Score=110.03 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=74.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+-.+........
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~--------------------------- 98 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPA--------------------------- 98 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTT---------------------------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHh---------------------------
Confidence 5679999999999999999998 57899999999999877633221100000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhh---------HHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN---------IVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N---------i~~yi~~I~~~LKPGG~wIN 332 (397)
....++.++.+|+.+.......+++||.|+.+| .|.-.. ...+++.++++|||||+++-
T Consensus 99 ------~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~-~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 99 ------GGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLF-PDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp ------CCCTTEEEEECCTTTCHHHHCCTTCEEEEEEES-CC-----------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred ------cCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeC-CCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE
Confidence 001237889999876211001257899997654 332110 13689999999999999984
No 173
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.14 E-value=8.1e-10 Score=104.24 Aligned_cols=166 Identities=17% Similarity=0.075 Sum_probs=96.3
Q ss_pred HhcccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhh
Q 015966 156 VRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILN 232 (397)
Q Consensus 156 ~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn 232 (397)
+|.|..- |. .+-..|.+.+......++.+|||+|||+|.++..||++ .-.|+|+|+|..|+... ++
T Consensus 51 yr~w~~~----~s----kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l---~~ 119 (232)
T 3id6_C 51 YREWNAF----RS----KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVREL---LL 119 (232)
T ss_dssp EEECCTT----TC----HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHH---HH
T ss_pred hhhhchH----HH----HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHH---HH
Confidence 7888643 22 23344444443323347889999999999999999986 23899999999996321 11
Q ss_pred cccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhh
Q 015966 233 HTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN 312 (397)
Q Consensus 233 ~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N 312 (397)
.+.+. .++.++.+|.+.........+.||+|++..-. ++
T Consensus 120 ~a~~r--------------------------------------~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~ 158 (232)
T 3id6_C 120 VAQRR--------------------------------------PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PD 158 (232)
T ss_dssp HHHHC--------------------------------------TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TT
T ss_pred Hhhhc--------------------------------------CCeEEEEcccccchhhhccccceEEEEecCCC---hh
Confidence 11100 12566778876532111124689999875432 23
Q ss_pred HHH-HHHHHHHhccCCcEEEEecCCcchh-hhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeecCCCCCC
Q 015966 313 IVE-YIEIISRILKDGGVWINLGPLLYHF-ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTT 382 (397)
Q Consensus 313 i~~-yi~~I~~~LKPGG~wIN~GPLlYh~-~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i~~~Y~~ 382 (397)
..+ .++.+.+.|||||.+|-. .++- .+. ...+ -+.. ++....+++.||++++.... -+|..
T Consensus 159 ~~~il~~~~~~~LkpGG~lvis---ik~~~~d~-t~~~---~e~~-~~~~~~L~~~gf~~~~~~~l-~p~~~ 221 (232)
T 3id6_C 159 QTDIAIYNAKFFLKVNGDMLLV---IKARSIDV-TKDP---KEIY-KTEVEKLENSNFETIQIINL-DPYDK 221 (232)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE---EC--------CCS---SSST-THHHHHHHHTTEEEEEEEEC-TTTCS
T ss_pred HHHHHHHHHHHhCCCCeEEEEE---EccCCccc-CCCH---HHHH-HHHHHHHHHCCCEEEEEecc-CCCcC
Confidence 333 345666699999999953 1211 110 1111 1223 34445666779999986543 34543
No 174
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.14 E-value=1.9e-10 Score=103.24 Aligned_cols=110 Identities=18% Similarity=0.100 Sum_probs=79.2
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccCcccccccccc
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
+.++..+.+.+.. .++.+|||+|||+|.++..|++.+ ..|+|+|+|..|+..++-.+...
T Consensus 63 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------- 125 (215)
T 2yxe_A 63 IHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL-------------- 125 (215)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--------------
Confidence 4455666665542 256799999999999999999987 79999999999998776332110
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCc
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 328 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG 328 (397)
.+ .++.+..+|+.+... ..+.||+|+....+.... +.+.++|||||
T Consensus 126 --------------~~-----------~~v~~~~~d~~~~~~---~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG 171 (215)
T 2yxe_A 126 --------------GY-----------DNVIVIVGDGTLGYE---PLAPYDRIYTTAAGPKIP------EPLIRQLKDGG 171 (215)
T ss_dssp --------------TC-----------TTEEEEESCGGGCCG---GGCCEEEEEESSBBSSCC------HHHHHTEEEEE
T ss_pred --------------CC-----------CCeEEEECCcccCCC---CCCCeeEEEECCchHHHH------HHHHHHcCCCc
Confidence 00 125677888754322 246899999876555432 48899999999
Q ss_pred EEEE
Q 015966 329 VWIN 332 (397)
Q Consensus 329 ~wIN 332 (397)
++|-
T Consensus 172 ~lv~ 175 (215)
T 2yxe_A 172 KLLM 175 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 175
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=1.2e-10 Score=106.51 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=77.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..||+. |..|+|+|+|..|+..|+-.+...
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 101 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL-------------------------------- 101 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 4569999999999999999998 689999999999998776332110
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.+..+|+.+........+.||+|+...-.. +...+++.+.++|||||++|-
T Consensus 102 ------~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~ 158 (233)
T 2gpy_A 102 ------GLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILS 158 (233)
T ss_dssp ------TCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEE
T ss_pred ------CCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEE
Confidence 011236778888876421100136899998765443 567899999999999999985
No 176
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.13 E-value=4.4e-11 Score=104.61 Aligned_cols=120 Identities=13% Similarity=0.062 Sum_probs=84.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 188 ESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
.++.+||++|||. | ++|+|..|+..|+-..
T Consensus 11 ~~g~~vL~~~~g~-------------v-~vD~s~~ml~~a~~~~------------------------------------ 40 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-------------S-PVEALKGLVDKLQALT------------------------------------ 40 (176)
T ss_dssp CTTSEEEEEECTT-------------S-CHHHHHHHHHHHHHHT------------------------------------
T ss_pred CCCCEEEEecCCc-------------e-eeeCCHHHHHHHHHhc------------------------------------
Confidence 4678999999996 2 3899999998665110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh-hhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA-HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta-~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~ 346 (397)
..++.+..+|+.++...+..+++||+|++.+.+... .+....++.++++|||||+++-..|.. .. .+
T Consensus 41 -------~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~---~~-~~- 108 (176)
T 2ld4_A 41 -------GNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVE---TA-VD- 108 (176)
T ss_dssp -------TTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEE---SS-SC-
T ss_pred -------ccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccc---cc-cc-
Confidence 001567788887652201135789999988766655 567899999999999999999644421 10 01
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 347 EDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 347 ~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
...+..+.+++.++++++|| +..
T Consensus 109 --~~~~~~~~~~~~~~l~~aGf-i~~ 131 (176)
T 2ld4_A 109 --NNSKVKTASKLCSALTLSGL-VEV 131 (176)
T ss_dssp --SSSSSCCHHHHHHHHHHTTC-EEE
T ss_pred --cccccCCHHHHHHHHHHCCC-cEe
Confidence 12345789999999999999 553
No 177
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.12 E-value=1.9e-10 Score=113.21 Aligned_cols=146 Identities=16% Similarity=0.127 Sum_probs=96.6
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 176 EELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 176 ~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
..|.+.++.. .+..+|||+|||+|+++..|++++ ..++++|+ ..|+..++
T Consensus 198 ~~l~~~~~~~--~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~------------------------- 249 (372)
T 1fp1_D 198 KRMLEIYTGF--EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP------------------------- 249 (372)
T ss_dssp HHHHHHCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-------------------------
T ss_pred HHHHHHhhcc--CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-------------------------
Confidence 4455555421 256799999999999999999986 45778899 88873211
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEE
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wI 331 (397)
. . .++.++.+||.+- .| . ||+|+....+... +.....|+.++++|||||++|
T Consensus 250 -------~--~-----------~~v~~~~~d~~~~--~~---~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~ 303 (372)
T 1fp1_D 250 -------P--L-----------SGIEHVGGDMFAS--VP---Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVI 303 (372)
T ss_dssp -------C--C-----------TTEEEEECCTTTC--CC---C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -------h--c-----------CCCEEEeCCcccC--CC---C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 0 0 1267899999762 22 3 9999988765533 334599999999999999998
Q ss_pred Eec---CC-cc-------h-hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 332 NLG---PL-LY-------H-FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 332 N~G---PL-lY-------h-~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
-.. |- .. . ..+..-.......+.+.+|++++++++||++++...
T Consensus 304 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 304 IVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp EEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred EEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 421 10 00 0 000000000002357999999999999999988553
No 178
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.12 E-value=2.6e-10 Score=111.35 Aligned_cols=133 Identities=16% Similarity=0.137 Sum_probs=92.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++ . .
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------------------------~--~-- 230 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS--------------------------------G--S-- 230 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--------------------------------C--B--
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc--------------------------------c--C--
Confidence 4579999999999999999987 678999999 88873211 0 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChh--hHHHHHHHHHHhccC---CcEEEEecCCc----
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKD---GGVWINLGPLL---- 337 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~--Ni~~yi~~I~~~LKP---GG~wIN~GPLl---- 337 (397)
.++.+..+||.+- .| .||+|+....+.... .....++.++++||| ||++|-..+..
T Consensus 231 ---------~~v~~~~~d~~~~--~p----~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 295 (352)
T 1fp2_A 231 ---------NNLTYVGGDMFTS--IP----NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKK 295 (352)
T ss_dssp ---------TTEEEEECCTTTC--CC----CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTT
T ss_pred ---------CCcEEEeccccCC--CC----CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCC
Confidence 1267899998762 22 399999876554333 345999999999999 99887432111
Q ss_pred -----chh---hhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 338 -----YHF---ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 338 -----Yh~---~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+.+ .+..-... ...+.+.+|++++++++||++++..
T Consensus 296 ~~~~~~~~~~~~d~~~~~~-~g~~~t~~e~~~ll~~aGf~~~~~~ 339 (352)
T 1fp2_A 296 DENQVTQIKLLMDVNMACL-NGKERNEEEWKKLFIEAGFQHYKIS 339 (352)
T ss_dssp SCHHHHHHHHHHHHHGGGG-TCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred CccchhhhHhhccHHHHhc-cCCCCCHHHHHHHHHHCCCCeeEEE
Confidence 000 00000000 0235789999999999999988754
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.12 E-value=2.4e-10 Score=117.07 Aligned_cols=129 Identities=14% Similarity=0.123 Sum_probs=84.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHHhhhhcccccCcccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
.+.++..+.+.+.. .++.+|||+|||+|+++..||++ |. .|+|+|+|..|+..|.-++..++....
T Consensus 227 ~p~~v~~ml~~l~l---~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~--------- 294 (433)
T 1u2z_A 227 LPNFLSDVYQQCQL---KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCK--------- 294 (433)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHH---------
T ss_pred cHHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHH---------
Confidence 35566666666542 26789999999999999999996 65 699999999999888433332211000
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEecc-cccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCC
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGD-FVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 327 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GD-F~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPG 327 (397)
. .++. ..++.++.|| +.+....+...+.||+|+...++- .+++...|+.+.++||||
T Consensus 295 -------~---~Gl~-----------~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpG 352 (433)
T 1u2z_A 295 -------L---YGMR-----------LNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVG 352 (433)
T ss_dssp -------H---TTBC-----------CCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTT
T ss_pred -------H---cCCC-----------CCceEEEEcCccccccccccccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCC
Confidence 0 0000 0236677764 432100000136899999765442 367889999999999999
Q ss_pred cEEEEe
Q 015966 328 GVWINL 333 (397)
Q Consensus 328 G~wIN~ 333 (397)
|++|..
T Consensus 353 G~lVi~ 358 (433)
T 1u2z_A 353 CKIISL 358 (433)
T ss_dssp CEEEES
T ss_pred eEEEEe
Confidence 999963
No 180
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.11 E-value=5.4e-10 Score=103.11 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=75.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+||++|||+|..+..||+. +..|+|+|+|..|+..|+-.+...
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------------------- 120 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA------------------------------- 120 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 3569999999999999999987 679999999999998776332211
Q ss_pred CCCCCCCCCCCcceeEecccccccC-CCCCC--CCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYS-DPSQV--GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~-~~~~~--~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.++.+|+.+... .+... ++||+|+... ...+...+++.+.++|||||++|-
T Consensus 121 -------g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 121 -------GVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDA---DKRNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp -------TCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECS---CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred -------CCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECC---CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 001236778888765321 11112 6899997532 235678999999999999999994
No 181
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.10 E-value=7.7e-10 Score=109.94 Aligned_cols=125 Identities=14% Similarity=0.225 Sum_probs=90.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||||||+|.++.++|+.|. .|+|+|+|..|+..|+-.+...
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~-------------------------------- 264 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA-------------------------------- 264 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--------------------------------
Confidence 567899999999999999999998 8999999999998887332110
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--ec--cC---ChhhH-HHHHHHHHHhccCCcEEEEecCCcc
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF--ID---TAHNI-VEYIEIISRILKDGGVWINLGPLLY 338 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FF--ID---ta~Ni-~~yi~~I~~~LKPGG~wIN~GPLlY 338 (397)
....++.+..+|+.++.. ..++||+|++. |. +. ...++ .++++.+.++| +|+.++-
T Consensus 265 ------gl~~~i~~~~~D~~~~~~---~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i------ 328 (373)
T 3tm4_A 265 ------GVLDKIKFIQGDATQLSQ---YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI------ 328 (373)
T ss_dssp ------TCGGGCEEEECCGGGGGG---TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE------
T ss_pred ------CCCCceEEEECChhhCCc---ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE------
Confidence 011237889999988642 24789999996 32 21 22333 56788999999 3333331
Q ss_pred hhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 339 HFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 339 h~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.-+.+.+++++.+.||+..+...
T Consensus 329 --------------~~~~~~~~~~~~~~G~~~~~~~~ 351 (373)
T 3tm4_A 329 --------------TTEKKAIEEAIAENGFEIIHHRV 351 (373)
T ss_dssp --------------ESCHHHHHHHHHHTTEEEEEEEE
T ss_pred --------------ECCHHHHHHHHHHcCCEEEEEEE
Confidence 12567888899999999988653
No 182
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.10 E-value=1.9e-10 Score=107.55 Aligned_cols=120 Identities=18% Similarity=0.096 Sum_probs=86.1
Q ss_pred hchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccc
Q 015966 169 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPW 245 (397)
Q Consensus 169 ~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPf 245 (397)
..|+..+..+.+.+.. .++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..++..+.... .
T Consensus 82 ~~~~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--g------- 149 (280)
T 1i9g_A 82 VIYPKDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCY--G------- 149 (280)
T ss_dssp CCCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHH--T-------
T ss_pred eecHHHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc--C-------
Confidence 3566677777666542 25679999999999999999996 6899999999999987763221000 0
Q ss_pred cccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhcc
Q 015966 246 IHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK 325 (397)
Q Consensus 246 i~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LK 325 (397)
....++.+..+|+.+.. ...+.||+|+... .+..++++.+.++||
T Consensus 150 ---------------------------~~~~~v~~~~~d~~~~~---~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~ 194 (280)
T 1i9g_A 150 ---------------------------QPPDNWRLVVSDLADSE---LPDGSVDRAVLDM-----LAPWEVLDAVSRLLV 194 (280)
T ss_dssp ---------------------------SCCTTEEEECSCGGGCC---CCTTCEEEEEEES-----SCGGGGHHHHHHHEE
T ss_pred ---------------------------CCCCcEEEEECchHhcC---CCCCceeEEEECC-----cCHHHHHHHHHHhCC
Confidence 00113677889987752 1247899998732 234478999999999
Q ss_pred CCcEEEEecC
Q 015966 326 DGGVWINLGP 335 (397)
Q Consensus 326 PGG~wIN~GP 335 (397)
|||+++-..|
T Consensus 195 pgG~l~~~~~ 204 (280)
T 1i9g_A 195 AGGVLMVYVA 204 (280)
T ss_dssp EEEEEEEEES
T ss_pred CCCEEEEEeC
Confidence 9999996443
No 183
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.10 E-value=1.6e-10 Score=119.27 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=75.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|++|. .|+|+|+|. |+..|+-.+...
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~--------------------------------- 203 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN--------------------------------- 203 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHc---------------------------------
Confidence 567999999999999999999986 899999998 987766332110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee--ccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F--FIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
....++.++.+|+.++.. .++||+|++.. +....++..+.+..+.++|||||++|
T Consensus 204 -----gl~~~v~~~~~d~~~~~~----~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 204 -----NLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp -----TCTTTEEEEESCTTTCCC----SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred -----CCCCcEEEEECchhhCcc----CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 011347889999987521 36899999853 22223456778888999999999998
No 184
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.10 E-value=2.8e-09 Score=104.94 Aligned_cols=140 Identities=19% Similarity=0.105 Sum_probs=96.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
...+|||+|||+|.++..|+++. -.++..|+ +.|+..++-.+..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~--------------------------------- 224 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF--------------------------------- 224 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---------------------------------
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---------------------------------
Confidence 45699999999999999999994 45677777 6787766522100
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhHHHHHHHHHHhccCCcEEEEecCCc-------
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLL------- 337 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yi~~I~~~LKPGG~wIN~GPLl------- 337 (397)
...++++++.|||.+.. ...+|+|+....|. ..+.....|+.+++.|||||.+|-+-+++
T Consensus 225 ------~~~~rv~~~~gD~~~~~-----~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~ 293 (353)
T 4a6d_A 225 ------QEEEQIDFQEGDFFKDP-----LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGP 293 (353)
T ss_dssp --------CCSEEEEESCTTTSC-----CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCC
T ss_pred ------cccCceeeecCccccCC-----CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCC
Confidence 01235899999997631 23579998876654 34456789999999999999888533221
Q ss_pred --chhhhc--cCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 338 --YHFADL--YGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 338 --Yh~~d~--~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
-.+-+. .-.. ..-+.|.+|++++++++||++++...
T Consensus 294 ~~~~~~dl~ml~~~--~g~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 294 LLTQLYSLNMLVQT--EGQERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp HHHHHHHHHHHHSS--SCCCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHhC--CCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 000010 0000 13467999999999999999988653
No 185
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.10 E-value=2.4e-10 Score=107.24 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=80.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
++..|.... +..+||++|||+|..+..||+. |..|+|+|+|..|+..|+-.+...
T Consensus 70 ll~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~---------------- 127 (247)
T 1sui_A 70 FLSMLLKLI------NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA---------------- 127 (247)
T ss_dssp HHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhh------CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----------------
Confidence 555555543 3469999999999999999987 789999999999998777332210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCC-CC---CCCCccEEEEeeccCChhhHHHHHHHHHHhccC
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD-PS---QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~-~~---~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKP 326 (397)
....++.++.||..++... .. ..++||+|+.... ..+...|++.+.++|||
T Consensus 128 ----------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~Lkp 182 (247)
T 1sui_A 128 ----------------------GVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKV 182 (247)
T ss_dssp ----------------------TCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCT
T ss_pred ----------------------CCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCC
Confidence 0112377888998764210 00 1478999975422 34577999999999999
Q ss_pred CcEEEE
Q 015966 327 GGVWIN 332 (397)
Q Consensus 327 GG~wIN 332 (397)
||++|-
T Consensus 183 GG~lv~ 188 (247)
T 1sui_A 183 GGVIGY 188 (247)
T ss_dssp TCCEEE
T ss_pred CeEEEE
Confidence 999983
No 186
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.09 E-value=7.4e-11 Score=110.39 Aligned_cols=103 Identities=12% Similarity=0.037 Sum_probs=75.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
+..+|||+|||+|..+..||+. |..|+|+|+|..|+..|+-.+...
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------------------- 108 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA------------------------------- 108 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT-------------------------------
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 3569999999999999999984 689999999999986554222110
Q ss_pred CCCCCCCCCCCcceeEecccccccCCC-C--CCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDP-S--QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~-~--~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
....++.++.||+.++.... . ..++||+|+... ...+...|++.+.++|||||++|-
T Consensus 109 -------g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 109 -------KQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDA---DKTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEES---CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcC---ChHHhHHHHHHHHHhcCCCeEEEE
Confidence 11234788999987753200 0 037899997543 245678899999999999999994
No 187
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.09 E-value=1.3e-09 Score=104.03 Aligned_cols=134 Identities=14% Similarity=0.055 Sum_probs=99.4
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
|+.|.+.++ ++.+|||+|||+|.++..||+.|- .|+|+|++..|+..|+--+.. +
T Consensus 12 L~~i~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~----~-------------- 68 (244)
T 3gnl_A 12 LEKVASYIT-----KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRS----S-------------- 68 (244)
T ss_dssp HHHHHTTCC-----SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 455666654 567999999999999999999985 699999999999988732210 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
...+.+.+..||..+... ..+.||+|+.+=-. +.-|.+.++.....|+++|.+|-
T Consensus 69 --------------------gl~~~I~v~~gD~l~~~~---~~~~~D~IviagmG--g~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 69 --------------------GLTEQIDVRKGNGLAVIE---KKDAIDTIVIAGMG--GTLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp --------------------TCTTTEEEEECSGGGGCC---GGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEE
T ss_pred --------------------CCCceEEEEecchhhccC---ccccccEEEEeCCc--hHHHHHHHHHHHHHhCCCCEEEE
Confidence 111237889999887543 12369999864321 23477889999999999999994
Q ss_pred ecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 333 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 333 ~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
.|. ...+.+++.+.+.||.+++|.
T Consensus 124 -q~~-----------------~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 124 -QPN-----------------IAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp -EES-----------------SCHHHHHHHHHHHTEEEEEEE
T ss_pred -EcC-----------------CChHHHHHHHHHCCCEEEEEE
Confidence 221 257899999999999998865
No 188
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.09 E-value=7.7e-11 Score=113.43 Aligned_cols=100 Identities=11% Similarity=-0.019 Sum_probs=68.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..+|++ ..|+|+|+|+ |+..++ +. + .+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~-------~~-----------------------~--~~~-- 125 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGH-------EK-----------------------P--RLV-- 125 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTS-------CC-----------------------C--CCC--
T ss_pred CCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhh-------hc-----------------------h--hhh--
Confidence 5779999999999999999999 6899999999 742110 00 0 000
Q ss_pred CCCCCCCCcceeE--ecccccccCCCCCCCCccEEEEeec-cCChh--h---HHHHHHHHHHhccCCc--EEEE
Q 015966 269 PASAGITEGFSMC--GGDFVEVYSDPSQVGAWDAVVTCFF-IDTAH--N---IVEYIEIISRILKDGG--VWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~--~GDF~ely~~~~~~~~fD~VvT~FF-IDta~--N---i~~yi~~I~~~LKPGG--~wIN 332 (397)
...+.++.++ .+|+.++. .++||+|++.+- +.... + ....|+.+.++||||| .||-
T Consensus 126 ---~~~~~~v~~~~~~~D~~~l~-----~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 126 ---ETFGWNLITFKSKVDVTKME-----PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp ---CCTTGGGEEEECSCCGGGCC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ---hhcCCCeEEEeccCcHhhCC-----CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 0011247788 89988752 478999998642 21111 1 1237899999999999 8884
No 189
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.08 E-value=5.5e-10 Score=101.18 Aligned_cols=104 Identities=16% Similarity=0.076 Sum_probs=76.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++-.+...
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 117 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA------------------------------- 117 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-------------------------------
Confidence 4569999999999999999986 679999999999998776433210
Q ss_pred CCCCCCCCCCCcceeEecccccccC-CCCC--CCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYS-DPSQ--VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~-~~~~--~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~ 333 (397)
....++.++.+|+.+... .+.. .++||+|+...- ..+...+++.+.++|||||++|-.
T Consensus 118 -------g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 118 -------EAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 011237788898866421 0001 168999976322 345678999999999999999953
No 190
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.08 E-value=4.2e-10 Score=108.06 Aligned_cols=101 Identities=12% Similarity=0.266 Sum_probs=75.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..||+. +..|+|+|+|..|+..|+......
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~--------------------------------- 169 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH--------------------------------- 169 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 3468999999999999999999 889999999999998887332110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCc---cEEEEee-ccCCh------------------hhHHHHHHHHH-Hhc
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAW---DAVVTCF-FIDTA------------------HNIVEYIEIIS-RIL 324 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~f---D~VvT~F-FIDta------------------~Ni~~yi~~I~-~~L 324 (397)
....++.++.+|+.+... ++| |+|+++- |+... .+-.++++.|. +.|
T Consensus 170 -----~l~~~v~~~~~D~~~~~~-----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l 239 (284)
T 1nv8_A 170 -----GVSDRFFVRKGEFLEPFK-----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYD 239 (284)
T ss_dssp -----TCTTSEEEEESSTTGGGG-----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCC
T ss_pred -----CCCCceEEEECcchhhcc-----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcC
Confidence 011237889999887432 478 9999872 33211 11237899999 999
Q ss_pred cCCcEEEE
Q 015966 325 KDGGVWIN 332 (397)
Q Consensus 325 KPGG~wIN 332 (397)
||||+++-
T Consensus 240 ~pgG~l~~ 247 (284)
T 1nv8_A 240 TSGKIVLM 247 (284)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 99999983
No 191
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.08 E-value=1.9e-10 Score=101.96 Aligned_cols=48 Identities=13% Similarity=-0.106 Sum_probs=36.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 221 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~ 221 (397)
.-.+++.+.++ ... .++.+|||+|||+|.++..|+++ +..|+|+|+|.
T Consensus 7 ~~kl~~~~~~~-~~~--~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 7 AYKLIELDNKY-LFL--KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp HHHHHHHHHHH-CCC--CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHHHc-CCC--CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 33466655543 211 25679999999999999999987 47899999998
No 192
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.08 E-value=2.1e-10 Score=105.58 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=75.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+-.+...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 108 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN------------------------------- 108 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999998 679999999999998776433210
Q ss_pred CCCCCCCCCCCcceeEecccccccC-C-----------CCCC--CCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYS-D-----------PSQV--GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~-~-----------~~~~--~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
....++.+..+|+.+... . .... +.||+|+... ...++..+++.+.++|||||++|
T Consensus 109 -------g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~---~~~~~~~~l~~~~~~L~pgG~lv 178 (239)
T 2hnk_A 109 -------GLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDA---DKENYPNYYPLILKLLKPGGLLI 178 (239)
T ss_dssp -------TCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeC---CHHHHHHHHHHHHHHcCCCeEEE
Confidence 001125677777765311 0 0111 6899998753 34567799999999999999999
Q ss_pred E
Q 015966 332 N 332 (397)
Q Consensus 332 N 332 (397)
-
T Consensus 179 ~ 179 (239)
T 2hnk_A 179 A 179 (239)
T ss_dssp E
T ss_pred E
Confidence 4
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.08 E-value=4.2e-10 Score=109.14 Aligned_cols=108 Identities=16% Similarity=0.190 Sum_probs=74.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++.+|++. .-.|+++|+|..|+..|+--+..... . ..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~-~----------------------~~---- 135 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA-G----------------------SY---- 135 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS-S----------------------CT----
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc-c----------------------cc----
Confidence 4579999999999999999998 35799999999999887732211000 0 00
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni--~~yi~~I~~~LKPGG~wIN 332 (397)
...++.++.||..+... ...++||+|++..+.. .+..+ .++++.++++|||||+++.
T Consensus 136 -------~~~rv~~~~~D~~~~l~--~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 196 (294)
T 3adn_A 136 -------DDPRFKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp -------TCTTCCEECSCSCC-----CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEE
T ss_pred -------cCCceEEEEChHHHHHh--hcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEE
Confidence 01247889999877543 2357899999854421 22223 6899999999999999995
No 194
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.08 E-value=4.5e-10 Score=108.61 Aligned_cols=113 Identities=18% Similarity=0.107 Sum_probs=80.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCe---EEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI---SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~---V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.+++.+.+.+.. .++.+|||+|||+|.++..||++|.. |+|+|+|..|+..++-.+...
T Consensus 62 ~~~~~l~~~l~~---~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------- 123 (317)
T 1dl5_A 62 SLMALFMEWVGL---DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL--------------- 123 (317)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhcCC---CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 455555555532 25779999999999999999999876 999999999998776322110
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcE
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~ 329 (397)
+ . .++.+..+|+.+... ..+.||+|++..-+.... +.+.++|||||+
T Consensus 124 -----------g------------~-~~v~~~~~d~~~~~~---~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~ 170 (317)
T 1dl5_A 124 -----------G------------I-ENVIFVCGDGYYGVP---EFSPYDVIFVTVGVDEVP------ETWFTQLKEGGR 170 (317)
T ss_dssp -----------T------------C-CSEEEEESCGGGCCG---GGCCEEEEEECSBBSCCC------HHHHHHEEEEEE
T ss_pred -----------C------------C-CCeEEEECChhhccc---cCCCeEEEEEcCCHHHHH------HHHHHhcCCCcE
Confidence 0 0 126778899877432 247899999886554332 578899999999
Q ss_pred EEE-ecCC
Q 015966 330 WIN-LGPL 336 (397)
Q Consensus 330 wIN-~GPL 336 (397)
++- ++|.
T Consensus 171 lvi~~~~~ 178 (317)
T 1dl5_A 171 VIVPINLK 178 (317)
T ss_dssp EEEEBCBG
T ss_pred EEEEECCC
Confidence 985 4443
No 195
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.07 E-value=1e-10 Score=109.00 Aligned_cols=123 Identities=11% Similarity=0.067 Sum_probs=85.4
Q ss_pred CCeEEEecCCCChhHHHHHHc------CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccc
Q 015966 190 PPACLVPGAGLGRLALEISHL------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 263 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~------Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~ 263 (397)
+.+|||+|||+|..+..||++ +..|+|+|+|..|+..|+ ..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~--------------------------------~~- 128 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA--------------------------------SD- 128 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG--------------------------------GG-
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh--------------------------------cc-
Confidence 469999999999999999997 789999999999963221 00
Q ss_pred cCCCCCCCCCCCCcceeEecccccc--cCCCCCCCCccEEEEeeccCChhhHHHHHHHHHH-hccCCcEEEEecCCcchh
Q 015966 264 IPDIHPASAGITEGFSMCGGDFVEV--YSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR-ILKDGGVWINLGPLLYHF 340 (397)
Q Consensus 264 iPDv~p~~~~~~~~ls~~~GDF~el--y~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~-~LKPGG~wIN~GPLlYh~ 340 (397)
..++.++.||+.+. ... .....||+|+.... . .++..+++.+++ +|||||++|-... .++
T Consensus 129 -----------~~~v~~~~gD~~~~~~l~~-~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d~--~~~ 191 (236)
T 2bm8_A 129 -----------MENITLHQGDCSDLTTFEH-LREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIEDM--IPY 191 (236)
T ss_dssp -----------CTTEEEEECCSSCSGGGGG-GSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECSC--HHH
T ss_pred -----------CCceEEEECcchhHHHHHh-hccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEeC--ccc
Confidence 02377889998774 111 01237999885432 1 257789999997 9999999995211 111
Q ss_pred hhccCCCCCccccCCHHHHHHHHHhC--CCEEEE
Q 015966 341 ADLYGQEDEMSIELSLEDVKRVALHY--GFEFEK 372 (397)
Q Consensus 341 ~d~~g~~~~~~ieLS~EEl~~ll~~~--GFeii~ 372 (397)
. .....+++.++++.. +|++..
T Consensus 192 ~----------~~~~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 192 W----------YRYAPQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp H----------HHHCHHHHHHHHHTTTTTEEEET
T ss_pred c----------cccCHHHHHHHHHhCcccEEEcc
Confidence 1 112345888888877 788753
No 196
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.07 E-value=5.4e-10 Score=103.66 Aligned_cols=112 Identities=15% Similarity=0.180 Sum_probs=75.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..+|++| ..|+|+|+|..|+..++-.+......+. . ...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-----------------~---~~~--- 105 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTA-----------------S---KHG--- 105 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC------------------C---CST---
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccc-----------------c---ccC---
Confidence 56799999999999999999996 4799999999999877633221100000 0 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhh---------HHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN---------IVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N---------i~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|+.+........+.+|.|+.+| -|.... -.++++.+.++|||||+++-
T Consensus 106 --------~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~-p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 106 --------FQNINVLRGNAMKFLPNFFEKGQLSKMFFCF-PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp --------TTTEEEEECCTTSCGGGTSCTTCEEEEEEES-CCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEeccHHHHHHHhccccccCEEEEEC-CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 0237788899876322112357899998553 232100 03789999999999999985
No 197
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.06 E-value=5.4e-10 Score=103.74 Aligned_cols=113 Identities=13% Similarity=0.104 Sum_probs=81.6
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccc
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~ 249 (397)
.++..|.... +..+||++|||+|..+..||+. |..|+++|+|..|+..|+-.+...
T Consensus 60 ~~l~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------------- 118 (237)
T 3c3y_A 60 QLMSFVLKLV------NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--------------- 118 (237)
T ss_dssp HHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhh------CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 3566655543 3569999999999999999987 789999999999998777333211
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccC-CCC---CCCCccEEEEeeccCChhhHHHHHHHHHHhcc
Q 015966 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DPS---QVGAWDAVVTCFFIDTAHNIVEYIEIISRILK 325 (397)
Q Consensus 250 Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~-~~~---~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LK 325 (397)
....++.++.||..++.. .+. ..++||+|+... ...+...|++.+.++||
T Consensus 119 -----------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~ 172 (237)
T 3c3y_A 119 -----------------------GVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVK 172 (237)
T ss_dssp -----------------------TCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEE
T ss_pred -----------------------CCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECC---chHHHHHHHHHHHHhcC
Confidence 011237788899876421 000 147899997531 23567899999999999
Q ss_pred CCcEEEE
Q 015966 326 DGGVWIN 332 (397)
Q Consensus 326 PGG~wIN 332 (397)
|||++|-
T Consensus 173 pGG~lv~ 179 (237)
T 3c3y_A 173 VGGIVAY 179 (237)
T ss_dssp EEEEEEE
T ss_pred CCeEEEE
Confidence 9999984
No 198
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.05 E-value=2.9e-10 Score=103.06 Aligned_cols=101 Identities=17% Similarity=0.156 Sum_probs=73.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-------eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccc
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-------ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 261 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-------~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~ 261 (397)
++.+|||+|||+|.++..|++++. .|+|+|+|..|+..++-.+... . .. .
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---~-~~-------------------~ 136 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD---K-PE-------------------L 136 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH---C-GG-------------------G
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc---C-cc-------------------c
Confidence 567999999999999999999865 9999999999998776432210 0 00 0
Q ss_pred cccCCCCCCCCCCCCcceeEeccccccc----CCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 262 VSIPDIHPASAGITEGFSMCGGDFVEVY----SDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 262 v~iPDv~p~~~~~~~~ls~~~GDF~ely----~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
+. ..++.+..+|+.+.. . ..+.||+|+....+.. +++.+.++|||||++|-
T Consensus 137 ~~-----------~~~v~~~~~d~~~~~~~~~~---~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 137 LK-----------IDNFKIIHKNIYQVNEEEKK---ELGLFDAIHVGASASE------LPEILVDLLAENGKLII 191 (227)
T ss_dssp GS-----------STTEEEEECCGGGCCHHHHH---HHCCEEEEEECSBBSS------CCHHHHHHEEEEEEEEE
T ss_pred cc-----------cCCEEEEECChHhcccccCc---cCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEE
Confidence 00 123678889987642 1 2468999987655442 35888999999999984
No 199
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.04 E-value=2.9e-10 Score=109.59 Aligned_cols=121 Identities=12% Similarity=0.154 Sum_probs=76.1
Q ss_pred CCCeEEEecCCCCh----hHHHHHHc------CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccc----------c
Q 015966 189 SPPACLVPGAGLGR----LALEISHL------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH----------S 248 (397)
Q Consensus 189 ~~~rVLvPGCGlGR----La~eLA~~------Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~----------~ 248 (397)
+..+||++|||||. +|..|++. |+.|+|+|+|..||..|+-- +||.-. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~-----------~y~~~~~~~~~~~~~~~ 173 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG-----------IYRLSELKTLSPQQLQR 173 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT-----------EEEGGGGTTSCHHHHHH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc-----------CCchhhhhcCCHHHHHH
Confidence 45799999999999 66666665 47999999999999988721 111000 0
Q ss_pred -ccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCChhhHHHHHHHHHHhc
Q 015966 249 -NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRIL 324 (397)
Q Consensus 249 -~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yi~~I~~~L 324 (397)
|.......+ ....+- + .+...+.|.++|+.+. ..+ ..+.||+|++.. |++. +...+.++.++++|
T Consensus 174 ~f~~~~~~~~--~~~~v~---~---~lr~~V~F~~~dl~~~-~~~-~~~~fDlI~crnvliyf~~-~~~~~vl~~~~~~L 242 (274)
T 1af7_A 174 YFMRGTGPHE--GLVRVR---Q---ELANYVEFSSVNLLEK-QYN-VPGPFDAIFCRNVMIYFDK-TTQEDILRRFVPLL 242 (274)
T ss_dssp HEEECCTTSC--SEEEEC---H---HHHTTEEEEECCTTCS-SCC-CCCCEEEEEECSSGGGSCH-HHHHHHHHHHGGGE
T ss_pred HhhccccCCC--Cceeec---h---hhcccCeEEecccCCC-CCC-cCCCeeEEEECCchHhCCH-HHHHHHHHHHHHHh
Confidence 000000000 000000 0 0113488999998873 111 146899999863 3443 44678999999999
Q ss_pred cCCcEEE
Q 015966 325 KDGGVWI 331 (397)
Q Consensus 325 KPGG~wI 331 (397)
||||+++
T Consensus 243 ~pgG~L~ 249 (274)
T 1af7_A 243 KPDGLLF 249 (274)
T ss_dssp EEEEEEE
T ss_pred CCCcEEE
Confidence 9999998
No 200
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.04 E-value=5.5e-10 Score=101.05 Aligned_cols=132 Identities=16% Similarity=0.067 Sum_probs=86.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+++.+.+. ... +++.+|||+|||+|.++..||+++..|+|+|+|..+.
T Consensus 12 KL~ei~~~~-~~~--~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~---------------------------- 60 (191)
T 3dou_A 12 KLEFLLDRY-RVV--RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE---------------------------- 60 (191)
T ss_dssp HHHHHHHHH-CCS--CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC----------------------------
T ss_pred HHHHHHHHc-CCC--CCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc----------------------------
Confidence 455555543 221 2578999999999999999999999999999996210
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCC-----CC---CCCccEEEEeeccCC-----------hhhH
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP-----SQ---VGAWDAVVTCFFIDT-----------AHNI 313 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~-----~~---~~~fD~VvT~FFIDt-----------a~Ni 313 (397)
+ .++.+++||+++..... .. .++||+|++....++ ...+
T Consensus 61 -----------~-----------~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~ 118 (191)
T 3dou_A 61 -----------I-----------AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIG 118 (191)
T ss_dssp -----------C-----------TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHH
T ss_pred -----------C-----------CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHH
Confidence 0 12677889987642100 00 148999998532211 1113
Q ss_pred HHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 314 VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 314 ~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
...++.+.++|||||.+|-. .| .. -..+++...++. .|+-++..
T Consensus 119 ~~~l~~a~~~LkpGG~lv~k---~~--~~-----------~~~~~~~~~l~~-~F~~v~~~ 162 (191)
T 3dou_A 119 QRVMEIAVRYLRNGGNVLLK---QF--QG-----------DMTNDFIAIWRK-NFSSYKIS 162 (191)
T ss_dssp HHHHHHHHHHEEEEEEEEEE---EE--CS-----------THHHHHHHHHGG-GEEEEEEE
T ss_pred HHHHHHHHHHccCCCEEEEE---Ec--CC-----------CCHHHHHHHHHH-hcCEEEEE
Confidence 46788889999999999941 12 11 124677777865 58777643
No 201
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.04 E-value=3e-10 Score=118.96 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=67.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
.+.||||+|||.|.++..||++|+.|+|+|+|..|+.+|+- ++.+..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~---~a~~~~------------------------------ 112 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA---LAEENP------------------------------ 112 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHHTST------------------------------
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH---HHHhcC------------------------------
Confidence 45799999999999999999999999999999999998872 221110
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhH--HHHHHHHHHhccCCcE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNI--VEYIEIISRILKDGGV 329 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni--~~yi~~I~~~LKPGG~ 329 (397)
.-++.|..++..++.. +..+++||+|++.=.|....+. ...+..+.+.|+++|.
T Consensus 113 ------~~~~~~~~~~~~~~~~-~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~ 168 (569)
T 4azs_A 113 ------DFAAEFRVGRIEEVIA-ALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQ 168 (569)
T ss_dssp ------TSEEEEEECCHHHHHH-HCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSS
T ss_pred ------CCceEEEECCHHHHhh-hccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccc
Confidence 0127888898877632 1235789999887433322222 1223334444555443
No 202
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.00 E-value=1.2e-09 Score=100.31 Aligned_cols=109 Identities=17% Similarity=0.057 Sum_probs=75.6
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn 251 (397)
.+...+.+.+.. .++.+|||+|||+|.++..|++++ ..|+|+|+|..|+..++-.+...
T Consensus 78 ~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~----------------- 137 (235)
T 1jg1_A 78 HMVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERA----------------- 137 (235)
T ss_dssp HHHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc-----------------
Confidence 344555554432 256799999999999999999997 89999999999998776332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
. + .++.+..+|+..-.. ....||+|+...-+... .+.+.++|||||++|
T Consensus 138 ---------~--~-----------~~v~~~~~d~~~~~~---~~~~fD~Ii~~~~~~~~------~~~~~~~L~pgG~lv 186 (235)
T 1jg1_A 138 ---------G--V-----------KNVHVILGDGSKGFP---PKAPYDVIIVTAGAPKI------PEPLIEQLKIGGKLI 186 (235)
T ss_dssp ---------T--C-----------CSEEEEESCGGGCCG---GGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEE
T ss_pred ---------C--C-----------CCcEEEECCcccCCC---CCCCccEEEECCcHHHH------HHHHHHhcCCCcEEE
Confidence 0 0 126778888733221 12459999987654432 247889999999988
Q ss_pred E
Q 015966 332 N 332 (397)
Q Consensus 332 N 332 (397)
-
T Consensus 187 i 187 (235)
T 1jg1_A 187 I 187 (235)
T ss_dssp E
T ss_pred E
Confidence 4
No 203
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.00 E-value=1.5e-09 Score=96.74 Aligned_cols=113 Identities=15% Similarity=0.096 Sum_probs=80.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+++.|. .|+|+|+|..|+..++..+.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----------------------------------- 95 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----------------------------------- 95 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------------------------------
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------------------------------
Confidence 567999999999999999999988 59999999999987652110
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g 345 (397)
++.++.+|+.++ .++||+|++. |+.-......++++.+.++| |++++...|
T Consensus 96 ---------~~~~~~~d~~~~------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~---------- 148 (200)
T 1ne2_A 96 ---------GVNFMVADVSEI------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNA---------- 148 (200)
T ss_dssp ---------TSEEEECCGGGC------CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEEG----------
T ss_pred ---------CCEEEECcHHHC------CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEcC----------
Confidence 157788998774 1689999986 32222122347899999998 666654211
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
-+.+.+.+++...| ++..
T Consensus 149 --------~~~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 149 --------KARDFLRREFSARG-DVFR 166 (200)
T ss_dssp --------GGHHHHHHHHHHHE-EEEE
T ss_pred --------chHHHHHHHHHHCC-CEEE
Confidence 12466888888888 6655
No 204
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.00 E-value=5.1e-10 Score=101.40 Aligned_cols=101 Identities=19% Similarity=0.113 Sum_probs=71.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..++..+... . .. ...
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~-~~-------------------~~~-- 131 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD---D-PT-------------------LLS-- 131 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH---C-TH-------------------HHH--
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh---c-cc-------------------ccC--
Confidence 5679999999999999999987 4 68999999999998776332110 0 00 000
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
..++.+..+|+.+... ..+.||+|+....+. ..++.+.++|||||++|-
T Consensus 132 ---------~~~v~~~~~d~~~~~~---~~~~fD~i~~~~~~~------~~~~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 132 ---------SGRVQLVVGDGRMGYA---EEAPYDAIHVGAAAP------VVPQALIDQLKPGGRLIL 180 (226)
T ss_dssp ---------TSSEEEEESCGGGCCG---GGCCEEEEEECSBBS------SCCHHHHHTEEEEEEEEE
T ss_pred ---------CCcEEEEECCcccCcc---cCCCcCEEEECCchH------HHHHHHHHhcCCCcEEEE
Confidence 0136778888875432 246899998765443 234688999999999985
No 205
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.00 E-value=1.1e-09 Score=106.47 Aligned_cols=108 Identities=16% Similarity=0.118 Sum_probs=77.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+||++|||+|.++.+++++ +..|+++|+|..|+..|+--+..... . .+.
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~----------------------~~~--- 130 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-G----------------------AFD--- 130 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-T----------------------GGG---
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-c----------------------ccc---
Confidence 4579999999999999999998 56899999999999877632210000 0 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC-----hhh--HHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-----AHN--IVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt-----a~N--i~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|..+... ...++||+|++..+... +.. ..++++.++++|||||+++-
T Consensus 131 --------~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 193 (314)
T 1uir_A 131 --------DPRAVLVIDDARAYLE--RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM 193 (314)
T ss_dssp --------CTTEEEEESCHHHHHH--HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred --------CCceEEEEchHHHHHH--hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEE
Confidence 1237889999877422 12578999998765432 122 26899999999999999984
No 206
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.99 E-value=1.9e-09 Score=106.42 Aligned_cols=124 Identities=20% Similarity=0.226 Sum_probs=83.5
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 247 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~ 247 (397)
.|..++..+.-... .+..+|||+|||+|.++.+|+++ +..|+++|+|..|+..|+--+.... .
T Consensus 105 ~y~e~L~~l~l~~~----~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~--~--------- 169 (334)
T 1xj5_A 105 AYQEMITHLPLCSI----PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVA--I--------- 169 (334)
T ss_dssp HHHHHHHHHHHTTS----SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH--G---------
T ss_pred HHHHHHHHHHHhhC----CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc--c---------
Confidence 35555555532111 14579999999999999999998 4689999999999988773221000 0
Q ss_pred cccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeec--cCChhh--HHHHHHHHHHh
Q 015966 248 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHN--IVEYIEIISRI 323 (397)
Q Consensus 248 ~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FF--IDta~N--i~~yi~~I~~~ 323 (397)
++. ..++.++.+|+.++... ...++||+|++..+ +..... ..++++.++++
T Consensus 170 -------------gl~-----------~~rv~~~~~D~~~~l~~-~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~ 224 (334)
T 1xj5_A 170 -------------GYE-----------DPRVNLVIGDGVAFLKN-AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARA 224 (334)
T ss_dssp -------------GGG-----------STTEEEEESCHHHHHHT-SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHH
T ss_pred -------------ccC-----------CCcEEEEECCHHHHHHh-ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHh
Confidence 000 12378899998774221 12478999998644 222222 25899999999
Q ss_pred ccCCcEEEEe
Q 015966 324 LKDGGVWINL 333 (397)
Q Consensus 324 LKPGG~wIN~ 333 (397)
|||||+++.-
T Consensus 225 LkpgG~lv~~ 234 (334)
T 1xj5_A 225 LRPGGVVCTQ 234 (334)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCcEEEEe
Confidence 9999999963
No 207
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.99 E-value=5.6e-09 Score=103.49 Aligned_cols=127 Identities=12% Similarity=0.054 Sum_probs=89.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+| |+|.++..+|++|. .|+|+|+|..|+..|+-.+... +
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--------------------------g----- 219 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--------------------------G----- 219 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--------------------------T-----
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-----
Confidence 467999999 99999999999986 8999999999998877322110 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEE-E-EecCCcchhhhcc
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW-I-NLGPLLYHFADLY 344 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~w-I-N~GPLlYh~~d~~ 344 (397)
.. ++.++.+|+.+.... ...++||+|++.--.... .+..+++.++++|||||.+ | .+..
T Consensus 220 -------~~-~v~~~~~D~~~~l~~-~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~--------- 280 (373)
T 2qm3_A 220 -------YE-DIEIFTFDLRKPLPD-YALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFGITR--------- 280 (373)
T ss_dssp -------CC-CEEEECCCTTSCCCT-TTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT---------
T ss_pred -------CC-CEEEEEChhhhhchh-hccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEec---------
Confidence 01 378899999872210 124689999986311111 3678999999999999943 2 2111
Q ss_pred CCCCCccccCCH---HHHHHHHH-hCCCEEEEE
Q 015966 345 GQEDEMSIELSL---EDVKRVAL-HYGFEFEKE 373 (397)
Q Consensus 345 g~~~~~~ieLS~---EEl~~ll~-~~GFeii~e 373 (397)
..-+. +++.+++. ..||++...
T Consensus 281 -------~~~~~~~~~~~~~~l~~~~g~~~~~~ 306 (373)
T 2qm3_A 281 -------RESSLDKWREIQKLLLNEFNVVITDI 306 (373)
T ss_dssp -------TTCCHHHHHHHHHHHHHTSCCEEEEE
T ss_pred -------CcCCHHHHHHHHHHHHHhcCcchhhh
Confidence 11234 77888888 899988653
No 208
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.98 E-value=1e-09 Score=96.63 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=63.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C----------CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCccc
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G----------FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSD 257 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G----------f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~ 257 (397)
++.+|||+|||+|.++..||++ | ..|+|+|+|..+. +
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------~-------------------------- 69 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------L-------------------------- 69 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------C--------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc------C--------------------------
Confidence 5679999999999999999998 5 6899999998320 0
Q ss_pred CccccccCCCCCCCCCCCCcceeE-ecccccccCC-----CCCCCCccEEEEeeccCC----hhhH-------HHHHHHH
Q 015966 258 QLRPVSIPDIHPASAGITEGFSMC-GGDFVEVYSD-----PSQVGAWDAVVTCFFIDT----AHNI-------VEYIEII 320 (397)
Q Consensus 258 qlr~v~iPDv~p~~~~~~~~ls~~-~GDF~ely~~-----~~~~~~fD~VvT~FFIDt----a~Ni-------~~yi~~I 320 (397)
.++.++ .+|+.+.... ....++||+|++.+-++. ..+. ...++.+
T Consensus 70 ------------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 2nyu_A 70 ------------------EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVT 131 (196)
T ss_dssp ------------------TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHH
Confidence 013344 5565432100 001357999998542221 1111 4789999
Q ss_pred HHhccCCcEEEE
Q 015966 321 SRILKDGGVWIN 332 (397)
Q Consensus 321 ~~~LKPGG~wIN 332 (397)
+++|||||++|-
T Consensus 132 ~~~LkpgG~lv~ 143 (196)
T 2nyu_A 132 PDILQPGGTFLC 143 (196)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHHhcCCCEEEE
Confidence 999999999995
No 209
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.97 E-value=1.6e-09 Score=108.39 Aligned_cols=133 Identities=8% Similarity=0.062 Sum_probs=89.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|++|. .|+|+|+|..|+..|+..+.. + .
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~----n----------------------~------ 259 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEA----N----------------------H------ 259 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHH----T----------------------T------
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c----------------------C------
Confidence 456999999999999999999997 799999999999887732210 0 0
Q ss_pred CCCCCCCCC-cceeEecccccccCC-CCCCCCccEEEEe--ec-------cCChhhHHHHHHHHHHhccCCcEEEEecCC
Q 015966 268 HPASAGITE-GFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FF-------IDTAHNIVEYIEIISRILKDGGVWINLGPL 336 (397)
Q Consensus 268 ~p~~~~~~~-~ls~~~GDF~ely~~-~~~~~~fD~VvT~--FF-------IDta~Ni~~yi~~I~~~LKPGG~wIN~GPL 336 (397)
... ++.++.+|+.++... ....++||+|+.. +| .+....+.+.++.+.++|||||+++-...
T Consensus 260 ------~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~- 332 (385)
T 2b78_A 260 ------LDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN- 332 (385)
T ss_dssp ------CCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC-
T ss_pred ------CCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC-
Confidence 011 377899998774210 0113589999974 22 22234455678888999999999884210
Q ss_pred cchhhhccCCCCCccccCCH----HHHHHHHHhCCCEEEEEe
Q 015966 337 LYHFADLYGQEDEMSIELSL----EDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 337 lYh~~d~~g~~~~~~ieLS~----EEl~~ll~~~GFeii~e~ 374 (397)
+-.++. +.+++.+.+.|++++...
T Consensus 333 --------------~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 360 (385)
T 2b78_A 333 --------------AANMTVSQFKKQIEKGFGKQKHTYLDLQ 360 (385)
T ss_dssp --------------CTTSCHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred --------------CCcCCHHHHHHHHHHHHHHcCCcEEEeC
Confidence 112333 445566678899966654
No 210
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.97 E-value=9.5e-10 Score=105.17 Aligned_cols=111 Identities=18% Similarity=0.207 Sum_probs=75.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccc-cCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS-IPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~-iPD 266 (397)
++.+|||+|||+|.++.+++++|. .|+++|+|..|+..|+-.+ ... . ++. ..+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~---------------~---------~l~~~~~ 129 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KID---------------N---------GLLEAML 129 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTT---------------T---------THHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhc---------------c---------ccccccc
Confidence 456999999999999999999864 8999999999998776322 000 0 000 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeecc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFI--Dta~Ni--~~yi~~I~~~LKPGG~wIN 332 (397)
.....++.++.+|..++.. . .++||+|+...+. .....+ .++++.++++|||||+++.
T Consensus 130 -----~~~~~~v~~~~~D~~~~l~--~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 191 (281)
T 1mjf_A 130 -----NGKHEKAKLTIGDGFEFIK--N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVT 191 (281)
T ss_dssp -----TTCCSSEEEEESCHHHHHH--H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEE
T ss_pred -----cCCCCcEEEEECchHHHhc--c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 0001247889999876422 1 4789999976542 112222 6899999999999999995
No 211
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.97 E-value=2.7e-09 Score=103.29 Aligned_cols=146 Identities=18% Similarity=0.187 Sum_probs=99.5
Q ss_pred ccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhccccc
Q 015966 159 WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETA 237 (397)
Q Consensus 159 WS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~ 237 (397)
|+.--..||.. +. +.+. ++.+|||+|||+|.++..+|++|. .|+|+|+++.++..++--+..
T Consensus 108 f~~~~~~er~r----i~----~~~~-----~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~---- 170 (278)
T 3k6r_A 108 FSPANVKERVR----MA----KVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL---- 170 (278)
T ss_dssp CCGGGHHHHHH----HH----HHCC-----TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHH----
T ss_pred EcCCcHHHHHH----HH----HhcC-----CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHH----
Confidence 66665666752 32 3332 577999999999999999999985 899999999998766522110
Q ss_pred CccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHH
Q 015966 238 GEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYI 317 (397)
Q Consensus 238 ~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi 317 (397)
+ ...+.+.++.+|.+++.. .+.||.|+...- ..-.+++
T Consensus 171 N----------------------------------~v~~~v~~~~~D~~~~~~----~~~~D~Vi~~~p----~~~~~~l 208 (278)
T 3k6r_A 171 N----------------------------------KVEDRMSAYNMDNRDFPG----ENIADRILMGYV----VRTHEFI 208 (278)
T ss_dssp T----------------------------------TCTTTEEEECSCTTTCCC----CSCEEEEEECCC----SSGGGGH
T ss_pred c----------------------------------CCCCcEEEEeCcHHHhcc----ccCCCEEEECCC----CcHHHHH
Confidence 0 012237788999888643 578999875422 2223678
Q ss_pred HHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 318 EIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 318 ~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
+.+.++|||||++. .|.+.... ....-..+.++++++..||++...
T Consensus 209 ~~a~~~lk~gG~ih-----~~~~~~e~-----~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 209 PKALSIAKDGAIIH-----YHNTVPEK-----LMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHEEEEEEEE-----EEEEEEGG-----GTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCCCEEE-----EEeeeccc-----ccchhHHHHHHHHHHHcCCcEEEE
Confidence 88899999999754 23232110 012345688999999999988653
No 212
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.96 E-value=1.2e-09 Score=99.60 Aligned_cols=104 Identities=19% Similarity=0.151 Sum_probs=72.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CC-------eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCcc
Q 015966 189 SPPACLVPGAGLGRLALEISHL-GF-------ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLR 260 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf-------~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr 260 (397)
++.+|||+|||+|.++..||++ |. .|+|+|+|..|+..++-.+.... ..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~------------------- 140 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD----RS------------------- 140 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH----HH-------------------
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC----cc-------------------
Confidence 5679999999999999999985 53 89999999999987764332100 00
Q ss_pred ccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE-ecC
Q 015966 261 PVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGP 335 (397)
Q Consensus 261 ~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN-~GP 335 (397)
.+.. .++.+..+|+.+.+. ..+.||+|+....+.. .++.+.++|||||++|- +++
T Consensus 141 ~~~~-----------~~v~~~~~d~~~~~~---~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 141 MLDS-----------GQLLIVEGDGRKGYP---PNAPYNAIHVGAAAPD------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp HHHH-----------TSEEEEESCGGGCCG---GGCSEEEEEECSCBSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred ccCC-----------CceEEEECCcccCCC---cCCCccEEEECCchHH------HHHHHHHHhcCCCEEEEEEec
Confidence 0000 126778888876322 1368999987655443 23788999999999984 443
No 213
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.95 E-value=2.1e-09 Score=105.10 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=91.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
...+|||+|||+|+++..|+++ +..++++|+ ..|+..++ . .
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------------------------~--~-- 235 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT--------------------------------G--N-- 235 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC--------------------------------C--C--
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc--------------------------------c--C--
Confidence 4569999999999999999998 467899999 57862111 0 0
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhh--HHHHHHHHHHhccC---CcEEEEecCCcc---
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKD---GGVWINLGPLLY--- 338 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yi~~I~~~LKP---GG~wIN~GPLlY--- 338 (397)
.++.+..+||.+ ..| .||+|+....+....+ ....++.++++||| ||++|-.-+..-
T Consensus 236 ---------~~v~~~~~d~~~--~~~----~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 300 (358)
T 1zg3_A 236 ---------ENLNFVGGDMFK--SIP----SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETS 300 (358)
T ss_dssp ---------SSEEEEECCTTT--CCC----CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTC
T ss_pred ---------CCcEEEeCccCC--CCC----CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCC
Confidence 126789999976 222 4999998876553333 56999999999999 998884221110
Q ss_pred ------hh---hhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 015966 339 ------HF---ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (397)
Q Consensus 339 ------h~---~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~ 375 (397)
.+ .+..-.......+.+.+|++++++++||++++...
T Consensus 301 ~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 301 DDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred ccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 00 00000000002357999999999999999887543
No 214
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.95 E-value=2.4e-09 Score=102.58 Aligned_cols=108 Identities=16% Similarity=0.156 Sum_probs=77.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+||++|||+|.++.++++.+ -.|+++|+|..|+..|+-.+... + . ...
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~---~------------------~---~~~--- 130 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI---S------------------C---GYE--- 130 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT---S------------------G---GGG---
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh---c------------------c---ccC---
Confidence 45799999999999999999883 68999999999998776321100 0 0 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhH--HHHHHHHHHhccCCcEEEEe
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWINL 333 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni--~~yi~~I~~~LKPGG~wIN~ 333 (397)
..++.++.+|+.+... ...++||+|++..+.. .+..+ .++++.++++|||||+++..
T Consensus 131 --------~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 131 --------DKRVNVFIEDASKFLE--NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp --------STTEEEEESCHHHHHH--HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred --------CCcEEEEECChHHHHH--hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1247889999877422 1247899999865422 23334 58999999999999999953
No 215
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.95 E-value=6.5e-09 Score=99.68 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=76.4
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+++.|.+.++. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+...
T Consensus 15 ~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 73 (285)
T 1zq9_A 15 LIINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGT------------------ 73 (285)
T ss_dssp HHHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTS------------------
T ss_pred HHHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 356666665542 25679999999999999999999999999999999998766221100
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee--ccCChhhHHHHHH------------
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FIDTAHNIVEYIE------------ 318 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F--FIDta~Ni~~yi~------------ 318 (397)
....++.++.+|+.++.. ..||+|+++. .+.+ +-+...++
T Consensus 74 --------------------~~~~~v~~~~~D~~~~~~-----~~fD~vv~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~ 127 (285)
T 1zq9_A 74 --------------------PVASKLQVLVGDVLKTDL-----PFFDTCVANLPYQISS-PFVFKLLLHRPFFRCAILMF 127 (285)
T ss_dssp --------------------TTGGGEEEEESCTTTSCC-----CCCSEEEEECCGGGHH-HHHHHHHHCSSCCSEEEEEE
T ss_pred --------------------CCCCceEEEEcceecccc-----hhhcEEEEecCcccch-HHHHHHHhcCcchhhhhhhh
Confidence 001237889999987521 3799999874 2322 21334432
Q ss_pred --HH--HHhccCCcEEE
Q 015966 319 --II--SRILKDGGVWI 331 (397)
Q Consensus 319 --~I--~~~LKPGG~wI 331 (397)
++ .++|||||.+.
T Consensus 128 qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 128 QREFALRLVAKPGDKLY 144 (285)
T ss_dssp EHHHHHHHHCCTTCTTC
T ss_pred hHHHHHHHhcCCCCccc
Confidence 33 36899999764
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.95 E-value=1.5e-09 Score=107.04 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=76.1
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
..+||++|||+|.++.+|+++ +..|+++|++..|+..|+--+. .+
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~-------------------------------~~-- 136 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFD-------------------------------IP-- 136 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSC-------------------------------CC--
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcc-------------------------------cc--
Confidence 459999999999999999983 7899999999999987762110 00
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni--~~yi~~I~~~LKPGG~wIN 332 (397)
...++.++.+|..++.. ....++||+|++-.|.. ....+ .++++.++++|||||+++-
T Consensus 137 ------~~~rv~v~~~Da~~~l~-~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~ 198 (317)
T 3gjy_A 137 ------RAPRVKIRVDDARMVAE-SFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVA 198 (317)
T ss_dssp ------CTTTEEEEESCHHHHHH-TCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCCceEEEECcHHHHHh-hccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 01247889999887532 11247899999865422 12222 5899999999999999983
No 217
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.95 E-value=2.6e-09 Score=103.15 Aligned_cols=107 Identities=15% Similarity=0.104 Sum_probs=74.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++.+++++ | ..|+++|+|..|+..++--+.... . ...
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~--~----------------------~~~--- 142 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTS--C----------------------GFD--- 142 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHH--G----------------------GGG---
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhc--c----------------------ccC---
Confidence 3479999999999999999998 3 689999999999987763221000 0 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC---Chhh--HHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---TAHN--IVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID---ta~N--i~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|+.+... ...++||+|+...+-. .... ..++++.++++|||||+++-
T Consensus 143 --------~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 143 --------DPRAEIVIANGAEYVR--KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp --------CTTEEEEESCHHHHGG--GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCceEEEECcHHHHHh--hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 1237889999877422 1247899999754311 1111 25899999999999999995
No 218
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.94 E-value=2.2e-09 Score=104.31 Aligned_cols=107 Identities=21% Similarity=0.189 Sum_probs=74.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+|||+|||+|.++.+|++++ ..|+++|+|..|+..|+--+.... + .+.
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~---------------~---------~~~--- 147 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA---------------I---------GYS--- 147 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH---------------G---------GGG---
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhh---------------c---------ccC---
Confidence 45799999999999999999984 689999999999987763221000 0 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccC--Chh--hHHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAH--NIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~--Ni~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|..++.. ...++||+|++..+.. .+. ...++++.++++|||||++|.
T Consensus 148 --------~~rv~v~~~Da~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 207 (304)
T 2o07_A 148 --------SSKLTLHVGDGFEFMK--QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCC 207 (304)
T ss_dssp --------CTTEEEEESCHHHHHH--TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEECcHHHHHh--hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE
Confidence 1237888999877422 1247899999764421 111 124789999999999999995
No 219
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.94 E-value=6.9e-09 Score=100.84 Aligned_cols=130 Identities=12% Similarity=0.028 Sum_probs=88.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||++ +..|+|+|+|..|+..++-.+... ++
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~--------------------------g~--- 168 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL--------------------------GV--- 168 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--------------------------TC---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh--------------------------CC---
Confidence 5679999999999999999986 368999999999998776332110 00
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe---e---ccCCh---------hhH-------HHHHHHHHHh
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---F---FIDTA---------HNI-------VEYIEIISRI 323 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~---F---FIDta---------~Ni-------~~yi~~I~~~ 323 (397)
.++.++.+|+.++.. ..+.||+|++. . .+... .++ .+.|+.++++
T Consensus 169 ----------~~v~~~~~D~~~~~~---~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 169 ----------LNVILFHSSSLHIGE---LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp ----------CSEEEESSCGGGGGG---GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CeEEEEECChhhccc---ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 126778889877532 24689999873 1 12111 111 4789999999
Q ss_pred ccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 324 LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
|||||++|-..-- ++ -+=..+.+..++++.||+++..
T Consensus 236 LkpGG~lv~stcs-~~------------~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 236 LKPGGILVYSTCS-LE------------PEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EEEEEEEEEEESC-CC------------GGGTHHHHHHHHHHSSEEEECC
T ss_pred CCCCCEEEEEeCC-CC------------hHHhHHHHHHHHhcCCCEEecC
Confidence 9999999831100 00 0113455777888899988753
No 220
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.94 E-value=2.6e-09 Score=108.90 Aligned_cols=145 Identities=13% Similarity=0.097 Sum_probs=93.2
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCC------CChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCcc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAG------LGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEW 240 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCG------lGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~ 240 (397)
.|.++.+.+.+.+.. +..+|||+||| +|..+..++++ +..|+|+|+|..|.. +
T Consensus 201 ~y~~~Ye~lL~~l~~----~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~------~-------- 262 (419)
T 3sso_A 201 WFTPHYDRHFRDYRN----QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV------D-------- 262 (419)
T ss_dssp BCHHHHHHHHGGGTT----SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG------C--------
T ss_pred hHHHHHHHHHHhhcC----CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh------c--------
Confidence 466677766655532 46799999999 88888888875 679999999998820 0
Q ss_pred ccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCC---CCCCCCccEEEEeeccCChhhHHHHH
Q 015966 241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDTAHNIVEYI 317 (397)
Q Consensus 241 ~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~---~~~~~~fD~VvT~FFIDta~Ni~~yi 317 (397)
..++.+++||+.++-.. ....++||+|++.. .....+...+|
T Consensus 263 ----------------------------------~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL 307 (419)
T 3sso_A 263 ----------------------------------ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSF 307 (419)
T ss_dssp ----------------------------------BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHH
Confidence 01377899998774210 00137899998753 23446788999
Q ss_pred HHHHHhccCCcEEEEecCCcchhhhccCCCC--CccccCCHHHHHHHHHhCCC
Q 015966 318 EIISRILKDGGVWINLGPLLYHFADLYGQED--EMSIELSLEDVKRVALHYGF 368 (397)
Q Consensus 318 ~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~--~~~ieLS~EEl~~ll~~~GF 368 (397)
+.++++|||||++|.. -+...|-..+++.. ...-.-..+-+++++..+..
T Consensus 308 ~el~rvLKPGGvlVi~-Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 308 AALFPHVRPGGLYVIE-DMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp HHHGGGEEEEEEEEEE-CGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred HHHHHhcCCCeEEEEE-ecccccCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 9999999999999952 22222222222111 01122345666667666544
No 221
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.93 E-value=7.2e-09 Score=102.48 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=91.9
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccc
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
..+.+.+.+.+.. .++.+|||||||+|.++..++++ +..++|+|++..|+..|
T Consensus 25 ~~l~~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------------- 80 (421)
T 2ih2_A 25 PEVVDFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------------- 80 (421)
T ss_dssp HHHHHHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------------
T ss_pred HHHHHHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------------
Confidence 4677777777653 24569999999999999999984 57999999999885211
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccC-C--------hhhH----
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID-T--------AHNI---- 313 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFID-t--------a~Ni---- 313 (397)
.++.++.+|+.+... .+.||+|+++ |+-. . ....
T Consensus 81 ---------------------------~~~~~~~~D~~~~~~----~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~ 129 (421)
T 2ih2_A 81 ---------------------------PWAEGILADFLLWEP----GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLY 129 (421)
T ss_dssp ---------------------------TTEEEEESCGGGCCC----SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHH
T ss_pred ---------------------------CCCcEEeCChhhcCc----cCCCCEEEECcCccCcccccccccccCHHHHHHH
Confidence 125678899887532 4689999996 4311 1 0112
Q ss_pred --------------HHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCC
Q 015966 314 --------------VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGF 368 (397)
Q Consensus 314 --------------~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GF 368 (397)
..+++.+.++|||||+++-+-|--|.+. -+.+++++.+.+.|+
T Consensus 130 ~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~------------~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 130 KKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVL------------EDFALLREFLAREGK 186 (421)
T ss_dssp HHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTC------------GGGHHHHHHHHHHSE
T ss_pred HHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcC------------ccHHHHHHHHHhcCC
Confidence 2568899999999999986555433211 134678888887777
No 222
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.93 E-value=9.7e-10 Score=105.09 Aligned_cols=100 Identities=8% Similarity=-0.018 Sum_probs=68.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..+|++ ..|+|+|+|+ |+..++ +. + ++.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~-------~~-----------------------~--~~~-- 117 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGH-------EV-----------------------P--RIT-- 117 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSC-------CC-----------------------C--CCC--
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhh-------hh-----------------------h--hhh--
Confidence 5679999999999999999999 7899999998 742110 00 0 000
Q ss_pred CCCCCCCCcceeE--ecccccccCCCCCCCCccEEEEeec-cCChh--h---HHHHHHHHHHhccCCc--EEEE
Q 015966 269 PASAGITEGFSMC--GGDFVEVYSDPSQVGAWDAVVTCFF-IDTAH--N---IVEYIEIISRILKDGG--VWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~--~GDF~ely~~~~~~~~fD~VvT~FF-IDta~--N---i~~yi~~I~~~LKPGG--~wIN 332 (397)
...+.++.++ ++|++++. .++||+|++.+- +.... + ....|+.++++||||| .||-
T Consensus 118 ---~~~~~~v~~~~~~~D~~~l~-----~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 118 ---ESYGWNIVKFKSRVDIHTLP-----VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ---CBTTGGGEEEECSCCTTTSC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ---hccCCCeEEEecccCHhHCC-----CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 0001146778 89998752 478999998642 11111 1 1237899999999999 8884
No 223
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.92 E-value=4.2e-09 Score=102.13 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=81.2
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccCcccccccc
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi 246 (397)
.|+.....+.+.+.. .++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..|+-.+.... ..+.+
T Consensus 89 ~~~~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~l---- 159 (336)
T 2b25_A 89 TFPKDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWR--DSWKL---- 159 (336)
T ss_dssp CCHHHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHH--HHHTT----
T ss_pred cCHHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhh--ccccc----
Confidence 455544444444322 25779999999999999999998 5 789999999999988774321100 00000
Q ss_pred ccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccC
Q 015966 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (397)
Q Consensus 247 ~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKP 326 (397)
| .+. ....++.+..+|+.+... +...+.||+|+.... +...+++.++++|||
T Consensus 160 ----n---------~~~---------~~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~~~~-----~~~~~l~~~~~~Lkp 211 (336)
T 2b25_A 160 ----S---------HVE---------EWPDNVDFIHKDISGATE-DIKSLTFDAVALDML-----NPHVTLPVFYPHLKH 211 (336)
T ss_dssp ----T---------CSS---------CCCCCEEEEESCTTCCC--------EEEEEECSS-----STTTTHHHHGGGEEE
T ss_pred ----c---------ccc---------ccCCceEEEECChHHccc-ccCCCCeeEEEECCC-----CHHHHHHHHHHhcCC
Confidence 0 000 011247889999877531 112467999987432 122478999999999
Q ss_pred CcEEEEecC
Q 015966 327 GGVWINLGP 335 (397)
Q Consensus 327 GG~wIN~GP 335 (397)
||++|-..|
T Consensus 212 gG~lv~~~~ 220 (336)
T 2b25_A 212 GGVCAVYVV 220 (336)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEeC
Confidence 999996444
No 224
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.92 E-value=2e-09 Score=105.30 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=77.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++.+++++ +..|+++|+|..|+..|+-.+... ++ .+.
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~---------------~~---------~~~--- 168 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI---------------SC---------GYE--- 168 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT---------------SG---------GGG---
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh---------------cc---------ccC---
Confidence 3569999999999999999998 578999999999998776221100 00 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeecc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFI--Dta~Ni--~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|+.+... ...++||+|++..+- ..+..+ .++++.++++|||||+++.
T Consensus 169 --------~~~v~~~~~D~~~~l~--~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 228 (321)
T 2pt6_A 169 --------DKRVNVFIEDASKFLE--NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 228 (321)
T ss_dssp --------STTEEEEESCHHHHHH--HCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEEccHHHHHh--hcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 1237889999877421 124789999986542 122333 6899999999999999995
No 225
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.91 E-value=2.6e-09 Score=101.50 Aligned_cols=97 Identities=14% Similarity=0.105 Sum_probs=74.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++..+|+++- .|+|+|+|..|+..++..+.. + .+
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~----n----------------------~l---- 168 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL----N----------------------KL---- 168 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH----T----------------------TC----
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------CC----
Confidence 567999999999999999999855 899999999999877632210 0 00
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
.++.++.||+.++ . . .+.||+|+...- .+..++++.+.+.|||||+++-
T Consensus 169 ---------~~~~~~~~d~~~~-~--~-~~~~D~Vi~d~p----~~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 169 ---------NNVIPILADNRDV-E--L-KDVADRVIMGYV----HKTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp ---------SSEEEEESCGGGC-C--C-TTCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEE
T ss_pred ---------CCEEEEECChHHc-C--c-cCCceEEEECCc----ccHHHHHHHHHHHcCCCCEEEE
Confidence 1256889999886 3 1 468999976532 2556789999999999999883
No 226
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.90 E-value=3e-09 Score=104.07 Aligned_cols=107 Identities=19% Similarity=0.219 Sum_probs=73.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+||++|||+|.++.++++. +..|+++|+|..|+..|+--+... ++ .+.
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~---------------~~---------~~~--- 160 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGM---------------SC---------GFS--- 160 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTT---------------SG---------GGG---
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHh---------------cc---------ccC---
Confidence 3569999999999999999988 468999999999998876321100 00 000
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeecc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFI--Dta~Ni--~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|..+... ...++||+|++..+- ..+..+ .++++.++++|||||+++.
T Consensus 161 --------~~rv~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~ 220 (314)
T 2b2c_A 161 --------HPKLDLFCGDGFEFLK--NHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSS 220 (314)
T ss_dssp --------CTTEEEECSCHHHHHH--HCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEE
T ss_pred --------CCCEEEEEChHHHHHH--hcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEE
Confidence 1237889999877422 124789999976532 112223 5899999999999999995
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.90 E-value=2.3e-09 Score=102.46 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=76.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|.++.+++++ | -.|+++|++..|+..|+--+... ++ ..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~---------------~~---------~~---- 126 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSI---------------AG---------KL---- 126 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHH---------------HT---------TT----
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhh---------------cc---------cc----
Confidence 4579999999999999999998 5 68999999999998877322100 00 00
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCC--hhh--HHHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHN--IVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~N--i~~yi~~I~~~LKPGG~wIN 332 (397)
...++.++.+|..+... ...++||+|++..+-.. +.. ..++++.++++|||||++|.
T Consensus 127 -------~~~rv~v~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 127 -------DDPRVDVQVDDGFMHIA--KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp -------TSTTEEEEESCSHHHHH--TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCceEEEECcHHHHHh--hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 01247889999887432 12478999997543211 111 25899999999999999995
No 228
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.86 E-value=9.1e-09 Score=100.21 Aligned_cols=109 Identities=7% Similarity=-0.025 Sum_probs=71.7
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeC----CHHHHHHHHhhhhcccccCcccccccccc
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEF----SYYMMICSSFILNHTETAGEWNIYPWIHS 248 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~----S~~ML~~s~fiLn~~~~~~~~~IyPfi~~ 248 (397)
.+.+.+++.+. .++.+|||+|||+|.++..||++| .|+|+|+ |..|+. .. .
T Consensus 70 KL~~i~~~~~~----~~g~~VLDlGcG~G~~s~~la~~~-~V~gvD~~~~~~~~~~~-------~~-~------------ 124 (305)
T 2p41_A 70 KLRWFVERNLV----TPEGKVVDLGCGRGGWSYYCGGLK-NVREVKGLTKGGPGHEE-------PI-P------------ 124 (305)
T ss_dssp HHHHHHHTTSS----CCCEEEEEETCTTSHHHHHHHTST-TEEEEEEECCCSTTSCC-------CC-C------------
T ss_pred HHHHHHHcCCC----CCCCEEEEEcCCCCHHHHHHHhcC-CEEEEeccccCchhHHH-------HH-H------------
Confidence 45555554221 256799999999999999999995 8999999 554420 00 0
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCcceeEec-ccccccCCCCCCCCccEEEEeeccCCh------hhHHHHHHHHH
Q 015966 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGG-DFVEVYSDPSQVGAWDAVVTCFFIDTA------HNIVEYIEIIS 321 (397)
Q Consensus 249 ~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~G-DF~ely~~~~~~~~fD~VvT~FFIDta------~Ni~~yi~~I~ 321 (397)
.+... ..++.++++ |++++. .++||+|++..-..+. ......|+.+.
T Consensus 125 ----------~~~~~-----------~~~v~~~~~~D~~~l~-----~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~ 178 (305)
T 2p41_A 125 ----------MSTYG-----------WNLVRLQSGVDVFFIP-----PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVE 178 (305)
T ss_dssp ----------CCSTT-----------GGGEEEECSCCTTTSC-----CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred ----------hhhcC-----------CCCeEEEeccccccCC-----cCCCCEEEECCccccCcchhhHHHHHHHHHHHH
Confidence 00000 123678888 887652 3689999985422211 11225788899
Q ss_pred HhccCCcEEEE
Q 015966 322 RILKDGGVWIN 332 (397)
Q Consensus 322 ~~LKPGG~wIN 332 (397)
++|||||.||-
T Consensus 179 ~~LkpGG~~v~ 189 (305)
T 2p41_A 179 NWLSNNTQFCV 189 (305)
T ss_dssp HHCCTTCEEEE
T ss_pred HHhCCCCEEEE
Confidence 99999999995
No 229
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.86 E-value=6.8e-09 Score=104.69 Aligned_cols=102 Identities=12% Similarity=0.099 Sum_probs=73.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..+|+.|..|+|+|+|..|+..++..+.. + .+.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~----n----------------------g~~----- 262 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALR----L----------------------GLR----- 262 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----H----------------------TCC-----
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHH----h----------------------CCC-----
Confidence 467999999999999999999999999999999999877632210 0 000
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccCCh-------hhHHHHHHHHHHhccCCcEEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTA-------HNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta-------~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
..+..+|..++... ..+.||+|+.. +|.... .+..++++.+.++|||||+++-
T Consensus 263 ---------~~~~~~D~~~~l~~--~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~ 324 (393)
T 4dmg_A 263 ---------VDIRHGEALPTLRG--LEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWL 324 (393)
T ss_dssp ---------CEEEESCHHHHHHT--CCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ---------CcEEEccHHHHHHH--hcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 12457888775321 12449999864 333222 3345778888999999999983
No 230
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.83 E-value=1.5e-08 Score=97.86 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=66.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+... .
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~--------------------------~------- 88 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYE--------------------------G------- 88 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 5679999999999999999999999999999999998776322100 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEee--ccCChhhHHHHH---------------HHHHHhccCCc
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FIDTAHNIVEYI---------------EIISRILKDGG 328 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F--FIDta~Ni~~yi---------------~~I~~~LKPGG 328 (397)
..++.++.||+.++. ..+||+|++.. .+. .+.+...+ +.+.++|+|+|
T Consensus 89 ------~~~v~~~~~D~~~~~-----~~~~D~Vv~n~py~~~-~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 89 ------YNNLEVYEGDAIKTV-----FPKFDVCTANIPYKIS-SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp ------CCCEEC----CCSSC-----CCCCSEEEEECCGGGH-HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred ------CCceEEEECchhhCC-----cccCCEEEEcCCcccc-cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 013677889987752 24799999863 333 33345555 55788999988
No 231
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.82 E-value=6.7e-09 Score=98.98 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=71.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+||++|||+|.++.++++.|-.|+++|++..|+..|+--+.. . ++ .+.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~------------~---~~---------~~~----- 122 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPH------------F---HE---------VKN----- 122 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTT------------H---HH---------HHT-----
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh------------h---cc---------ccC-----
Confidence 456999999999999999998887899999999998655411100 0 00 000
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|..++. ++||+|+... -| ...+++.++++|||||+++.
T Consensus 123 ------~~rv~~~~~D~~~~~------~~fD~Ii~d~-~d----p~~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 123 ------NKNFTHAKQLLDLDI------KKYDLIFCLQ-EP----DIHRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp ------CTTEEEESSGGGSCC------CCEEEEEESS-CC----CHHHHHHHHTTEEEEEEEEE
T ss_pred ------CCeEEEEechHHHHH------hhCCEEEECC-CC----hHHHHHHHHHhcCCCcEEEE
Confidence 123778889987642 6799998752 12 23589999999999999996
No 232
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.81 E-value=8.3e-09 Score=102.80 Aligned_cols=106 Identities=15% Similarity=0.093 Sum_probs=76.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|+.|. .|+|+|+|..|+..++..+.. + .
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~----n----------------------~------ 264 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKL----N----------------------G------ 264 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T----------------------T------
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------C------
Confidence 457999999999999999999987 899999999999877632210 0 0
Q ss_pred CCCCCCCCCcceeEecccccccCC-CCCCCCccEEEEe--eccCCh-------hhHHHHHHHHHHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFIDTA-------HNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~-~~~~~~fD~VvT~--FFIDta-------~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
...++.++.+|+.++... ....++||+|+.. +|..+. .+..+++..+.++|||||+++-
T Consensus 265 ------~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 333 (396)
T 2as0_A 265 ------VEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVT 333 (396)
T ss_dssp ------CGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------CCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 011367889998775310 0014689999874 333222 4456788999999999998874
No 233
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.79 E-value=3.1e-08 Score=92.78 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=44.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHH
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~ 228 (397)
.+++.+.+.+.. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++
T Consensus 17 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~ 69 (244)
T 1qam_A 17 HNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTE 69 (244)
T ss_dssp HHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 366666665532 25679999999999999999999999999999999997665
No 234
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.78 E-value=2.3e-08 Score=97.09 Aligned_cols=172 Identities=13% Similarity=0.087 Sum_probs=104.5
Q ss_pred HHHHHHHhcccc--cChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCC--ChhHHHHHHc---CCeEEEEeCCHH
Q 015966 150 CIIRNIVRDWAA--EGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGL--GRLALEISHL---GFISQGNEFSYY 222 (397)
Q Consensus 150 stL~q~~RDWS~--eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGl--GRLa~eLA~~---Gf~V~GnD~S~~ 222 (397)
..-.++.+-|.. +...+-...+...+.+|... ....+|||+|||+ |....++|++ +..|+|+|.|..
T Consensus 43 ~~~~~~~~~~P~~~~~a~~nr~fl~rav~~l~~~------~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~ 116 (277)
T 3giw_A 43 EAGDAMSREWPALPVHMRANRDWMNRAVAHLAKE------AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPI 116 (277)
T ss_dssp HHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHT------SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhccc------cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChH
Confidence 344455555543 22222223444455555421 1235899999998 5566777764 789999999999
Q ss_pred HHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEeccccccc---CCCCCCCCcc
Q 015966 223 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVY---SDPSQVGAWD 299 (397)
Q Consensus 223 ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely---~~~~~~~~fD 299 (397)
||..|+-.+... ...++.++.+|+.++. ..+...+.||
T Consensus 117 mLa~Ar~~l~~~---------------------------------------~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 117 VLTLSQGLLAST---------------------------------------PEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp HHHTTHHHHCCC---------------------------------------SSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred HHHHHHHHhccC---------------------------------------CCCcEEEEEecccChhhhhcccccccccC
Confidence 998776433110 0123788999998751 1010013444
Q ss_pred -----EEEEe---eccCChhhHHHHHHHHHHhccCCcEEEE--ecCCcc-h--------hhhccCCCCCccccCCHHHHH
Q 015966 300 -----AVVTC---FFIDTAHNIVEYIEIISRILKDGGVWIN--LGPLLY-H--------FADLYGQEDEMSIELSLEDVK 360 (397)
Q Consensus 300 -----~VvT~---FFIDta~Ni~~yi~~I~~~LKPGG~wIN--~GPLlY-h--------~~d~~g~~~~~~ieLS~EEl~ 360 (397)
+|+.+ .||....+...+|+++++.|+|||+++- +.+-.- + |.. .| .+ ....|.+||.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~-~g-~p--~~~rs~~ei~ 233 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAA-RN-MP--MRLRTHAEAE 233 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHH-TT-CC--CCCCCHHHHH
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHh-cC-CC--CccCCHHHHH
Confidence 45544 3677665577899999999999999984 221100 0 111 12 22 2357999999
Q ss_pred HHHHhCCCEEEE
Q 015966 361 RVALHYGFEFEK 372 (397)
Q Consensus 361 ~ll~~~GFeii~ 372 (397)
+++. ||++++
T Consensus 234 ~~f~--Glelve 243 (277)
T 3giw_A 234 EFFE--GLELVE 243 (277)
T ss_dssp HTTT--TSEECT
T ss_pred HHhC--CCcccC
Confidence 9994 999876
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.76 E-value=1.5e-08 Score=100.97 Aligned_cols=107 Identities=11% Similarity=0.094 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|+.|. .|+|+|+|..|+..|+..+.. + .+ +
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~----n----------------------gl--~-- 269 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVEL----N----------------------KL--D-- 269 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T----------------------TC--C--
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c----------------------CC--C--
Confidence 456999999999999999999986 899999999999877632210 0 00 0
Q ss_pred CCCCCCCCCcceeEecccccccCC-CCCCCCccEEEEe--ecc-------CChhhHHHHHHHHHHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFI-------DTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~-~~~~~~fD~VvT~--FFI-------Dta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++.+|+.++... ....++||+|+.. +|. +......+.+..+.++|||||+++-
T Consensus 270 -------~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 337 (396)
T 3c0k_A 270 -------LSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLT 337 (396)
T ss_dssp -------GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEE
T ss_pred -------ccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 11367889998775320 0013689999875 222 2225577899999999999999883
No 236
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.75 E-value=1.7e-08 Score=95.67 Aligned_cols=133 Identities=15% Similarity=-0.012 Sum_probs=86.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||++ | ..|+|+|+|..|+..++-.+... ++
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~--------------------------g~--- 133 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM--------------------------GV--- 133 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT--------------------------TC---
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh--------------------------CC---
Confidence 5679999999999999999984 5 78999999999998766322110 00
Q ss_pred CCCCCCCCCCCcceeEecccccccCC-CCCCCCccEEEEe--ec-cC---------------ChhhHHHHHHHHHHhccC
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FF-ID---------------TAHNIVEYIEIISRILKD 326 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~-~~~~~~fD~VvT~--FF-ID---------------ta~Ni~~yi~~I~~~LKP 326 (397)
.++.++.+|+.++... ....+.||+|++. +. +- ......+.++.++++|||
T Consensus 134 ----------~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp 203 (274)
T 3ajd_A 134 ----------LNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK 203 (274)
T ss_dssp ----------CSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE
T ss_pred ----------CcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1367788998775310 0014689999875 11 11 012346789999999999
Q ss_pred CcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHH-hCCCEEEEE
Q 015966 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVAL-HYGFEFEKE 373 (397)
Q Consensus 327 GG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~-~~GFeii~e 373 (397)
||++|-...-+. -+=..+.+..+++ ..+|+++..
T Consensus 204 gG~lv~stcs~~-------------~~ene~~v~~~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 204 DGELVYSTCSME-------------VEENEEVIKYILQKRNDVELIII 238 (274)
T ss_dssp EEEEEEEESCCC-------------TTSSHHHHHHHHHHCSSEEEECC
T ss_pred CCEEEEEECCCC-------------hHHhHHHHHHHHHhCCCcEEecC
Confidence 999984211110 0113455666664 457877653
No 237
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.74 E-value=1.6e-08 Score=108.89 Aligned_cols=105 Identities=12% Similarity=0.110 Sum_probs=77.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+|||+|||+|.++..+|+.|.. |+|+|+|..||..++--+.. + .+.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~----n----------------------gl~---- 588 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL----N----------------------GLT---- 588 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T----------------------TCC----
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------CCC----
Confidence 4679999999999999999999986 99999999999877632210 0 000
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--ecc---------CChhhHHHHHHHHHHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFI---------DTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFI---------Dta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
..++.++++|..++.. ...++||+|+.. +|. +...+..+.++.+.++|||||+++-
T Consensus 589 -------~~~v~~i~~D~~~~l~--~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~ 655 (703)
T 3v97_A 589 -------GRAHRLIQADCLAWLR--EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 655 (703)
T ss_dssp -------STTEEEEESCHHHHHH--HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------ccceEEEecCHHHHHH--hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 0237889999887532 124789999874 332 2234566789999999999999993
No 238
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.74 E-value=4.2e-08 Score=99.50 Aligned_cols=120 Identities=16% Similarity=0.201 Sum_probs=80.1
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---------------CCeEEEEeCCHHHHHHHHhhhhcccc
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---------------GFISQGNEFSYYMMICSSFILNHTET 236 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---------------Gf~V~GnD~S~~ML~~s~fiLn~~~~ 236 (397)
.++++.+.+.+.. ..+.+|||||||+|.+...+++. +..+.|+|++..|+..|+..+..
T Consensus 157 ~~v~~~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l--- 230 (445)
T 2okc_A 157 RPLIQAMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL--- 230 (445)
T ss_dssp HHHHHHHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH---
Confidence 3455555554432 25679999999999999988864 46899999999999887732210
Q ss_pred cCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccCC-----
Q 015966 237 AGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT----- 309 (397)
Q Consensus 237 ~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDt----- 309 (397)
+ ++. .....+..||++.... .++||+|+++ |....
T Consensus 231 ------~-----------------g~~-----------~~~~~i~~gD~l~~~~----~~~fD~Iv~NPPf~~~~~~~~~ 272 (445)
T 2okc_A 231 ------H-----------------GIG-----------TDRSPIVCEDSLEKEP----STLVDVILANPPFGTRPAGSVD 272 (445)
T ss_dssp ------T-----------------TCC-----------SSCCSEEECCTTTSCC----SSCEEEEEECCCSSCCCTTCCC
T ss_pred ------h-----------------CCC-----------cCCCCEeeCCCCCCcc----cCCcCEEEECCCCCCcccccch
Confidence 0 000 0024678888776422 3589999987 32211
Q ss_pred ----------hhhHHHHHHHHHHhccCCcEEEEecC
Q 015966 310 ----------AHNIVEYIEIISRILKDGGVWINLGP 335 (397)
Q Consensus 310 ----------a~Ni~~yi~~I~~~LKPGG~wIN~GP 335 (397)
...-..+++.+.++|||||+++-+-|
T Consensus 273 ~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 273 INRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 01124789999999999999985444
No 239
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.73 E-value=2.1e-08 Score=98.24 Aligned_cols=120 Identities=11% Similarity=0.057 Sum_probs=84.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++.. |+.+..|+|+|+|..|+..++..+.. + .
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~----n----------------------~------- 240 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKL----N----------------------K------- 240 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHH----T----------------------T-------
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHH----c----------------------C-------
Confidence 467999999999999999 98777899999999999877632210 0 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~ 348 (397)
...++.++.+|+.++. ++||+|+. |......++++.+.++|||||+++-.. +.
T Consensus 241 -----l~~~v~~~~~D~~~~~------~~fD~Vi~----dpP~~~~~~l~~~~~~L~~gG~l~~~~-----~~------- 293 (336)
T 2yx1_A 241 -----LEHKIIPILSDVREVD------VKGNRVIM----NLPKFAHKFIDKALDIVEEGGVIHYYT-----IG------- 293 (336)
T ss_dssp -----CTTTEEEEESCGGGCC------CCEEEEEE----CCTTTGGGGHHHHHHHEEEEEEEEEEE-----EE-------
T ss_pred -----CCCcEEEEECChHHhc------CCCcEEEE----CCcHhHHHHHHHHHHHcCCCCEEEEEE-----ee-------
Confidence 1123778999987752 68999986 333334488999999999999887311 11
Q ss_pred CccccCCHHHHHHHHHhC-CCEEEEEe
Q 015966 349 EMSIELSLEDVKRVALHY-GFEFEKEK 374 (397)
Q Consensus 349 ~~~ieLS~EEl~~ll~~~-GFeii~e~ 374 (397)
.. .+++.+.+.+. ||++...+
T Consensus 294 ---~~--~~~~~~~l~~~~~~~i~~~~ 315 (336)
T 2yx1_A 294 ---KD--FDKAIKLFEKKCDCEVLEKR 315 (336)
T ss_dssp ---SS--SHHHHHHHHHHSEEEEEEEE
T ss_pred ---cC--chHHHHHHHHhcCCcEEEEE
Confidence 01 34555666665 78776543
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.73 E-value=4.3e-08 Score=95.75 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=86.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-------CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccc
Q 015966 189 SPPACLVPGAGLGRLALEISHLG-------FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 261 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G-------f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~ 261 (397)
++.+|||||||+|.++..+++.+ ..++|+|++..|+..|+..+... .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--------------------------g 183 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--------------------------R 183 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH--------------------------T
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC--------------------------C
Confidence 46799999999999999998875 68999999999998877322100 0
Q ss_pred cccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--e-ccCChh--------------hH-HHHHHHHHHh
Q 015966 262 VSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--F-FIDTAH--------------NI-VEYIEIISRI 323 (397)
Q Consensus 262 v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--F-FIDta~--------------Ni-~~yi~~I~~~ 323 (397)
+ ++.+..||+.+.. ..+.||+|+++ | ++.... +. ..+++.+.+.
T Consensus 184 ~--------------~~~i~~~D~l~~~----~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 245 (344)
T 2f8l_A 184 Q--------------KMTLLHQDGLANL----LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRY 245 (344)
T ss_dssp C--------------CCEEEESCTTSCC----CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHT
T ss_pred C--------------CceEEECCCCCcc----ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHH
Confidence 0 1467888876532 24789999987 2 332211 12 2579999999
Q ss_pred ccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCE
Q 015966 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFE 369 (397)
Q Consensus 324 LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFe 369 (397)
|||||+++-+-|--+ +.. -..+++++.+.+.|+.
T Consensus 246 Lk~gG~~~~v~p~~~-~~~-----------~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 246 TKPGGYLFFLVPDAM-FGT-----------SDFAKVDKFIKKNGHI 279 (344)
T ss_dssp EEEEEEEEEEEEGGG-GGS-----------TTHHHHHHHHHHHEEE
T ss_pred hCCCCEEEEEECchh-cCC-----------chHHHHHHHHHhCCeE
Confidence 999999886443221 111 1348888888887773
No 241
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.70 E-value=1.7e-07 Score=89.85 Aligned_cols=152 Identities=15% Similarity=0.072 Sum_probs=95.3
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCcccc
Q 015966 163 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNI 242 (397)
Q Consensus 163 G~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~I 242 (397)
.-.||-.+|.++-..+.+. + ...+|||+|||+|-|+..++ -+..+.|.|+|..|+.+++..+...
T Consensus 85 STrerLp~ld~fY~~i~~~-~-----~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~-------- 149 (253)
T 3frh_A 85 STKERLAELDTLYDFIFSA-E-----TPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREK-------- 149 (253)
T ss_dssp HHHHHGGGHHHHHHHHTSS-C-----CCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHT--------
T ss_pred CHHHHhhhHHHHHHHHhcC-C-----CCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhc--------
Confidence 3457777777777766654 2 46799999999999999988 7789999999999999887544210
Q ss_pred ccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe---eccCChhhHHHHHHH
Q 015966 243 YPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEI 319 (397)
Q Consensus 243 yPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yi~~ 319 (397)
+..+++..+|+...-. .+.||+|+.. -.|+...- .....
T Consensus 150 --------------------------------g~~~~~~v~D~~~~~~----~~~~DvvLllk~lh~LE~q~~--~~~~~ 191 (253)
T 3frh_A 150 --------------------------------DWDFTFALQDVLCAPP----AEAGDLALIFKLLPLLEREQA--GSAMA 191 (253)
T ss_dssp --------------------------------TCEEEEEECCTTTSCC----CCBCSEEEEESCHHHHHHHST--THHHH
T ss_pred --------------------------------CCCceEEEeecccCCC----CCCcchHHHHHHHHHhhhhch--hhHHH
Confidence 0126778888765422 4689999875 23332211 23447
Q ss_pred HHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 320 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 320 I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+.+.|+++|++|++.- ....|.. ..++=.+++..+-.-...+.++.+.
T Consensus 192 ll~aL~~~~vvVsfPt-----ksl~Gr~--~gm~~~Y~~~~e~~~~~~~~~~~~~ 239 (253)
T 3frh_A 192 LLQSLNTPRMAVSFPT-----RSLGGRG--KGMEANYAAWFEGGLPAEFEIEDKK 239 (253)
T ss_dssp HHHHCBCSEEEEEEEC-----C-------------CHHHHHHHHSCTTEEEEEEE
T ss_pred HHHHhcCCCEEEEcCh-----HHhcCCC--cchhhHHHHHHHHHhhccchhhhhe
Confidence 7789999999999631 0111111 1344455444444335556666544
No 242
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.69 E-value=5.1e-09 Score=97.50 Aligned_cols=111 Identities=14% Similarity=0.184 Sum_probs=73.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
+++.+.+.+.. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++ +.
T Consensus 17 ~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~-------~~---------------- 70 (245)
T 1yub_A 17 VLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSS-------EK---------------- 70 (245)
T ss_dssp THHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSS-------CT----------------
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHH-------HH----------------
Confidence 34444444432 25679999999999999999999999999999999973221 00
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccCChhhHHHHH--------------
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYI-------------- 317 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta~Ni~~yi-------------- 317 (397)
+. ...++.++.+|+.++.. + ..+.| .|+++ |++.+ .-+...+
T Consensus 71 --------~~----------~~~~v~~~~~D~~~~~~-~-~~~~f-~vv~n~Py~~~~-~~~~~~~~~~~~~~~~lm~q~ 128 (245)
T 1yub_A 71 --------LK----------LNTRVTLIHQDILQFQF-P-NKQRY-KIVGNIPYHLST-QIIKKVVFESRASDIYLIVEE 128 (245)
T ss_dssp --------TT----------TCSEEEECCSCCTTTTC-C-CSSEE-EEEEECCSSSCH-HHHHHHHHHCCCEEEEEEEES
T ss_pred --------hc----------cCCceEEEECChhhcCc-c-cCCCc-EEEEeCCccccH-HHHHHHHhCCCCCeEEEEeeH
Confidence 00 01237888999987532 1 12578 55555 45543 2233333
Q ss_pred HHHHHhccCCcEEEE
Q 015966 318 EIISRILKDGGVWIN 332 (397)
Q Consensus 318 ~~I~~~LKPGG~wIN 332 (397)
+.+.++|||||.+.-
T Consensus 129 e~a~rll~~~G~l~v 143 (245)
T 1yub_A 129 GFYKRTLDIHRTLGL 143 (245)
T ss_dssp SHHHHHHCGGGSHHH
T ss_pred HHHHHHhCCCCchhh
Confidence 779999999998763
No 243
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.66 E-value=2.7e-08 Score=98.85 Aligned_cols=104 Identities=13% Similarity=0.014 Sum_probs=74.9
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCC
Q 015966 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p 269 (397)
+.+|||+|||+|.++..+|+.+..|+|+|+|..|+..++..+.. + .
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~----n----------------------~-------- 255 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARL----N----------------------G-------- 255 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHH----T----------------------T--------
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHH----c----------------------C--------
Confidence 45899999999999999999988899999999999877632210 0 0
Q ss_pred CCCCCCCcceeEecccccccCC-CCCCCCccEEEEe--eccCC-------hhhHHHHHHHHHHhccCCcEEEE
Q 015966 270 ASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFIDT-------AHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 270 ~~~~~~~~ls~~~GDF~ely~~-~~~~~~fD~VvT~--FFIDt-------a~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
. .++.++.+|+.++... ....++||+|+.. +|..+ .....++++.+.++|||||+++-
T Consensus 256 ----~-~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 323 (382)
T 1wxx_A 256 ----L-GNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILAT 323 (382)
T ss_dssp ----C-TTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ----C-CCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0 1267888998775320 0014689999863 23221 14456788999999999999884
No 244
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.66 E-value=5.3e-08 Score=94.77 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=75.9
Q ss_pred CCCeEEEecC------CCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCc
Q 015966 189 SPPACLVPGA------GLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQL 259 (397)
Q Consensus 189 ~~~rVLvPGC------GlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~ql 259 (397)
++.+|||+|| |+|. ..++++ +..|+|+|+|.. + .
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~--------------------------- 105 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------S--------------------------- 105 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------C---------------------------
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------C---------------------------
Confidence 6779999999 4466 333433 479999999984 0 0
Q ss_pred cccccCCCCCCCCCCCCccee-EecccccccCCCCCCCCccEEEEeecc--------CC---hhhHHHHHHHHHHhccCC
Q 015966 260 RPVSIPDIHPASAGITEGFSM-CGGDFVEVYSDPSQVGAWDAVVTCFFI--------DT---AHNIVEYIEIISRILKDG 327 (397)
Q Consensus 260 r~v~iPDv~p~~~~~~~~ls~-~~GDF~ely~~~~~~~~fD~VvT~FFI--------Dt---a~Ni~~yi~~I~~~LKPG 327 (397)
++.+ ++||+.++.. .++||+|++.... +. ..-+.+.++.++++||||
T Consensus 106 -----------------~v~~~i~gD~~~~~~----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpG 164 (290)
T 2xyq_A 106 -----------------DADSTLIGDCATVHT----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG 164 (290)
T ss_dssp -----------------SSSEEEESCGGGCCC----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEE
T ss_pred -----------------CCEEEEECccccCCc----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence 1456 8899887532 3689999986431 11 222457899999999999
Q ss_pred cEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 328 G~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
|.++-.. + .. -..+++.+++++.||..++.
T Consensus 165 G~~v~~~---~--~~-----------~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 165 GSIAVKI---T--EH-----------SWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp EEEEEEE---C--SS-----------SCCHHHHHHHTTEEEEEEEE
T ss_pred cEEEEEE---e--cc-----------CCHHHHHHHHHHcCCcEEEE
Confidence 9999521 1 10 12358999999999976553
No 245
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.61 E-value=1.4e-07 Score=94.72 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=77.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC----------------------------------------Ce
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG----------------------------------------FI 213 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G----------------------------------------f~ 213 (397)
+...|..... ..++.+|||||||+|.++.++|..| ..
T Consensus 183 lAa~ll~~~~---~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 183 LAAGLIYLTP---WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp HHHHHHHTSC---CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred HHHHHHHhhC---CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 4445544433 1256789999999999999999886 45
Q ss_pred EEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCC
Q 015966 214 SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPS 293 (397)
Q Consensus 214 V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~ 293 (397)
|+|+|+|..|+..|+..+... + ....+.+.++|+.++..
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~--------------------------g------------l~~~i~~~~~D~~~l~~--- 298 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIA--------------------------G------------VDEYIEFNVGDATQFKS--- 298 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHH--------------------------T------------CGGGEEEEECCGGGCCC---
T ss_pred EEEEECCHHHHHHHHHHHHHc--------------------------C------------CCCceEEEECChhhcCc---
Confidence 999999999999887432211 0 11237889999988642
Q ss_pred CCCCccEEEEe--ec--cCChhhHHHHHHHHHHhccC
Q 015966 294 QVGAWDAVVTC--FF--IDTAHNIVEYIEIISRILKD 326 (397)
Q Consensus 294 ~~~~fD~VvT~--FF--IDta~Ni~~yi~~I~~~LKP 326 (397)
.++||+|+++ |. +....++....+.+.+.||+
T Consensus 299 -~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 299 -EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp -SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh
Confidence 3689999996 43 33345677788888888887
No 246
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.60 E-value=1.9e-07 Score=94.05 Aligned_cols=101 Identities=10% Similarity=0.112 Sum_probs=73.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----------------------------------------EEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFI----------------------------------------SQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~----------------------------------------V~GnD~S~~ML~~s~ 228 (397)
++..||||+||+|.++.|.|..+.+ |+|+|+|..|+..|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 5678999999999999999987653 999999999999887
Q ss_pred hhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--ec
Q 015966 229 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF 306 (397)
Q Consensus 229 fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FF 306 (397)
--+... .....+.+.++|+.++.. .++||+|++. |.
T Consensus 281 ~Na~~~--------------------------------------gl~~~I~~~~~D~~~~~~----~~~fD~Iv~NPPYg 318 (393)
T 3k0b_A 281 QNAVEA--------------------------------------GLGDLITFRQLQVADFQT----EDEYGVVVANPPYG 318 (393)
T ss_dssp HHHHHT--------------------------------------TCTTCSEEEECCGGGCCC----CCCSCEEEECCCCC
T ss_pred HHHHHc--------------------------------------CCCCceEEEECChHhCCC----CCCCCEEEECCCCc
Confidence 322110 011237889999988632 3589999998 54
Q ss_pred c--CChhhHHHHHHHHHHhccC--CcEEE
Q 015966 307 I--DTAHNIVEYIEIISRILKD--GGVWI 331 (397)
Q Consensus 307 I--Dta~Ni~~yi~~I~~~LKP--GG~wI 331 (397)
. .....+.+..+.+.+.||+ ||...
T Consensus 319 ~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 319 ERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred cccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 3 2334566777778888876 55433
No 247
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.60 E-value=4e-07 Score=92.67 Aligned_cols=131 Identities=14% Similarity=0.070 Sum_probs=85.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||.|..+..||++ | ..|+|+|+|..|+..++-.+... ++
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~--------------------------g~--- 309 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM--------------------------GI--- 309 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------TC---
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc--------------------------CC---
Confidence 5679999999999999999985 3 68999999999998766332110 00
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEE---ee---ccCCh---------hhH-------HHHHHHHHHh
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FIDTA---------HNI-------VEYIEIISRI 323 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT---~F---FIDta---------~Ni-------~~yi~~I~~~ 323 (397)
.++.++.+|+.++.. ....+.||+|+. |. .+... .++ .+.++.+.++
T Consensus 310 ----------~~v~~~~~D~~~~~~-~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~ 378 (450)
T 2yxl_A 310 ----------KIVKPLVKDARKAPE-IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARL 378 (450)
T ss_dssp ----------CSEEEECSCTTCCSS-SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTT
T ss_pred ----------CcEEEEEcChhhcch-hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 126678888876521 012367999996 21 12211 222 5689999999
Q ss_pred ccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhC-CCEEEE
Q 015966 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHY-GFEFEK 372 (397)
Q Consensus 324 LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~-GFeii~ 372 (397)
|||||++|-...-+. -+=..+.+..++++. ||+++.
T Consensus 379 LkpGG~lvy~tcs~~-------------~~ene~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 379 VKPGGRLLYTTCSIF-------------KEENEKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp EEEEEEEEEEESCCC-------------GGGTHHHHHHHHHHCSSCEECC
T ss_pred cCCCcEEEEEeCCCC-------------hhhHHHHHHHHHHhCCCCEEee
Confidence 999999983111100 011345667777765 788765
No 248
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.55 E-value=6.6e-07 Score=90.00 Aligned_cols=101 Identities=9% Similarity=0.093 Sum_probs=76.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----------------------------------------EEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFI----------------------------------------SQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~----------------------------------------V~GnD~S~~ML~~s~ 228 (397)
++..||||+||+|.++.|.|..+.+ |+|+|+|..|+..|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 5678999999999999999987643 999999999999887
Q ss_pred hhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--ec
Q 015966 229 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF 306 (397)
Q Consensus 229 fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FF 306 (397)
-.+... .....+.+.++|+.++.. ...||+|+++ |-
T Consensus 274 ~Na~~~--------------------------------------gl~~~I~~~~~D~~~l~~----~~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 274 KNAREV--------------------------------------GLEDVVKLKQMRLQDFKT----NKINGVLISNPPYG 311 (384)
T ss_dssp HHHHHT--------------------------------------TCTTTEEEEECCGGGCCC----CCCSCEEEECCCCT
T ss_pred HHHHHc--------------------------------------CCCCceEEEECChHHCCc----cCCcCEEEECCchh
Confidence 332110 111237889999988632 3589999998 54
Q ss_pred --cCChhhHHHHHHHHHHhccC--CcEEE
Q 015966 307 --IDTAHNIVEYIEIISRILKD--GGVWI 331 (397)
Q Consensus 307 --IDta~Ni~~yi~~I~~~LKP--GG~wI 331 (397)
+....++.+..+.+.+.||+ ||...
T Consensus 312 ~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 312 ERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred hccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 55556788888888888887 55443
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.52 E-value=6.1e-07 Score=91.21 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=67.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..||+.|..|+|+|+|..|+..|+..+.. + .
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~----n----------------------g------- 336 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI----N----------------------N------- 336 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----H----------------------T-------
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c----------------------C-------
Confidence 457999999999999999999999999999999999877632210 0 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChh-hH-HHHHHHHHHhccCCcEEEE
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH-NI-VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~-Ni-~~yi~~I~~~LKPGG~wIN 332 (397)
. . +.+..+|+.++.. .+||+|+.. ... .+ ...++.+. .|||||+++-
T Consensus 337 -----l-~-v~~~~~d~~~~~~-----~~fD~Vv~d----PPr~g~~~~~~~~l~-~l~p~givyv 385 (425)
T 2jjq_A 337 -----V-D-AEFEVASDREVSV-----KGFDTVIVD----PPRAGLHPRLVKRLN-REKPGVIVYV 385 (425)
T ss_dssp -----C-C-EEEEECCTTTCCC-----TTCSEEEEC----CCTTCSCHHHHHHHH-HHCCSEEEEE
T ss_pred -----C-c-EEEEECChHHcCc-----cCCCEEEEc----CCccchHHHHHHHHH-hcCCCcEEEE
Confidence 0 1 5678899887632 289999873 221 11 13555554 4999998773
No 250
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.52 E-value=4e-07 Score=93.77 Aligned_cols=130 Identities=16% Similarity=0.067 Sum_probs=86.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||++ +-.|+|+|+|..|+..++-.+... ++
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~--------------------------g~--- 155 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW--------------------------GV--- 155 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH--------------------------TC---
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------CC---
Confidence 5779999999999999999986 358999999999998766322111 00
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe---e---ccCChhhH----------------HHHHHHHHHh
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---F---FIDTAHNI----------------VEYIEIISRI 323 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~---F---FIDta~Ni----------------~~yi~~I~~~ 323 (397)
.++.++.+|..++.. ...+.||+|+.- . .+...+++ .+.|+.+.++
T Consensus 156 ----------~nv~v~~~Da~~l~~--~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~ 223 (456)
T 3m4x_A 156 ----------SNAIVTNHAPAELVP--HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKM 223 (456)
T ss_dssp ----------SSEEEECCCHHHHHH--HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred ----------CceEEEeCCHHHhhh--hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 126678888877531 114789999862 1 11111111 2679999999
Q ss_pred ccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 324 LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
|||||++|-.. -.+ .-+=..+.+..++++.||+++.
T Consensus 224 LkpGG~LvYsT-Cs~------------~~eEne~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 224 LKNKGQLIYST-CTF------------APEENEEIISWLVENYPVTIEE 259 (456)
T ss_dssp EEEEEEEEEEE-SCC------------CGGGTHHHHHHHHHHSSEEEEC
T ss_pred cCCCcEEEEEE-eec------------ccccCHHHHHHHHHhCCCEEEe
Confidence 99999998210 000 0122456677888888888765
No 251
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.51 E-value=5.6e-07 Score=87.35 Aligned_cols=153 Identities=12% Similarity=0.028 Sum_probs=100.6
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCcc
Q 015966 163 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEW 240 (397)
Q Consensus 163 G~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~ 240 (397)
.-.||-.+|.++-..+.+..+ ...+|||+|||+|=|+.-++.. ...+.|+|++..|+.+++-.+...
T Consensus 111 STreRLp~lD~fY~~i~~~i~-----~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~------ 179 (281)
T 3lcv_B 111 STRERLPHLDEFYRELFRHLP-----RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL------ 179 (281)
T ss_dssp HHHHHGGGHHHHHHHHGGGSC-----CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT------
T ss_pred CHHHHhHhHHHHHHHHHhccC-----CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc------
Confidence 356888888888887777764 3569999999999999999887 357999999999999887544210
Q ss_pred ccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHH----H
Q 015966 241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVE----Y 316 (397)
Q Consensus 241 ~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~----y 316 (397)
+ -..++..+|+..-- ..+.||+|+.. .+.+-+.+ .
T Consensus 180 --------------------g--------------~~~~~~v~D~~~~~----p~~~~DvaL~l---kti~~Le~q~kg~ 218 (281)
T 3lcv_B 180 --------------------N--------------VPHRTNVADLLEDR----LDEPADVTLLL---KTLPCLETQQRGS 218 (281)
T ss_dssp --------------------T--------------CCEEEEECCTTTSC----CCSCCSEEEET---TCHHHHHHHSTTH
T ss_pred --------------------C--------------CCceEEEeeecccC----CCCCcchHHHH---HHHHHhhhhhhHH
Confidence 0 11566777876532 25889999874 33332221 2
Q ss_pred HHHHHHhccCCcEEEEecCCcchhhhccCCCCCcccc-CCHHHHHHHHHhCCCEEEEEe
Q 015966 317 IEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIE-LSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 317 i~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ie-LS~EEl~~ll~~~GFeii~e~ 374 (397)
.-.+.+.|+|||++||+.- ....|..+ .++ .=.+..++.+...|+.+.+..
T Consensus 219 g~~ll~aL~~~~vvVSfp~-----ksl~Grs~--gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 219 GWEVIDIVNSPNIVVTFPT-----KSLGQRSK--GMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHHHHSSCSEEEEEEEC-----C---------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhCCCCEEEeccc-----hhhcCCCc--chhhHHHHHHHHHHHhcCCceeeee
Confidence 3389999999999999532 00111111 222 223555666777788666543
No 252
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.49 E-value=3.4e-07 Score=92.39 Aligned_cols=130 Identities=15% Similarity=0.050 Sum_probs=84.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
++.+|||+|||+|..+..||+++ ..|+|+|+|..|+..++-.+... ++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~--------------------------g~---- 295 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--------------------------GM---- 295 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT--------------------------TC----
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc--------------------------CC----
Confidence 56799999999999999999986 58999999999997665322110 00
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEE---ee---ccC---------ChhhH-------HHHHHHHHHhc
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FID---------TAHNI-------VEYIEIISRIL 324 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT---~F---FID---------ta~Ni-------~~yi~~I~~~L 324 (397)
++.++.+|+.++... ...+.||+|+. |. .+. +..++ .+.++.+.++|
T Consensus 296 ----------~~~~~~~D~~~~~~~-~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 296 ----------KATVKQGDGRYPSQW-CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 (429)
T ss_dssp ----------CCEEEECCTTCTHHH-HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE
T ss_pred ----------CeEEEeCchhhchhh-cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 145677887764210 11368999986 32 121 11222 47799999999
Q ss_pred cCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHh-CCCEEEE
Q 015966 325 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALH-YGFEFEK 372 (397)
Q Consensus 325 KPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~-~GFeii~ 372 (397)
||||++|-...-+.. +=..+.+..++++ -+|+++.
T Consensus 365 kpGG~lvystcs~~~-------------~ene~~v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 365 KTGGTLVYATCSVLP-------------EENSLQIKAFLQRTADAELCE 400 (429)
T ss_dssp EEEEEEEEEESCCCG-------------GGTHHHHHHHHHHCTTCEECS
T ss_pred CCCCEEEEEECCCCh-------------hhHHHHHHHHHHhCCCCEEeC
Confidence 999999842111110 1123566666665 4787764
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.48 E-value=6.2e-07 Score=87.29 Aligned_cols=84 Identities=14% Similarity=0.038 Sum_probs=61.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
+++.+.+.... .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+..
T Consensus 38 i~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~-------------------- 94 (295)
T 3gru_A 38 FVNKAVESANL---TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL-------------------- 94 (295)
T ss_dssp HHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH--------------------
T ss_pred HHHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc--------------------
Confidence 44444444432 2567999999999999999999999999999999999876622210
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC 304 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~ 304 (397)
..++.++.||+.++.. ....||+|+.+
T Consensus 95 ---------------------~~~v~vi~gD~l~~~~---~~~~fD~Iv~N 121 (295)
T 3gru_A 95 ---------------------YNNIEIIWGDALKVDL---NKLDFNKVVAN 121 (295)
T ss_dssp ---------------------CSSEEEEESCTTTSCG---GGSCCSEEEEE
T ss_pred ---------------------CCCeEEEECchhhCCc---ccCCccEEEEe
Confidence 0137889999987532 23579999977
No 254
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.47 E-value=8.2e-07 Score=89.93 Aligned_cols=137 Identities=15% Similarity=0.113 Sum_probs=85.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+|||+|.++..||+++..|+|+|+|..|+..|+..+.. + .
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~----~----------------------~------- 332 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARL----N----------------------G------- 332 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHH----T----------------------T-------
T ss_pred CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHH----c----------------------C-------
Confidence 457999999999999999999999999999999999887732210 0 0
Q ss_pred CCCCCCCCcceeEecccccccC-CCCCCCCccEEEEeeccCChhh-HHHHHHHHHHhccCCcEEEE-ecCCcchhhhccC
Q 015966 269 PASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHN-IVEYIEIISRILKDGGVWIN-LGPLLYHFADLYG 345 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~-~~~~~~~fD~VvT~FFIDta~N-i~~yi~~I~~~LKPGG~wIN-~GPLlYh~~d~~g 345 (397)
. .++.++.+|+.+... .+...++||+|+.. .... ..+.++.+.+ ++|+++..- ..|-
T Consensus 333 -----~-~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d----PPr~g~~~~~~~l~~-~~p~~ivyvsc~p~--------- 392 (433)
T 1uwv_A 333 -----L-QNVTFYHENLEEDVTKQPWAKNGFDKVLLD----PARAGAAGVMQQIIK-LEPIRIVYVSCNPA--------- 392 (433)
T ss_dssp -----C-CSEEEEECCTTSCCSSSGGGTTCCSEEEEC----CCTTCCHHHHHHHHH-HCCSEEEEEESCHH---------
T ss_pred -----C-CceEEEECCHHHHhhhhhhhcCCCCEEEEC----CCCccHHHHHHHHHh-cCCCeEEEEECChH---------
Confidence 0 137788999877422 11234689999863 2211 1234454443 788886642 2111
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe-ecCCCCCCCcccc
Q 015966 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYTTNPRSM 387 (397)
Q Consensus 346 ~~~~~~ieLS~EEl~~ll~~~GFeii~e~-~i~~~Y~~d~~sm 387 (397)
.| ..++. ++.+.||++.+-. ...-+++..-+++
T Consensus 393 -------tl-ard~~-~l~~~Gy~~~~~~~~d~Fp~t~HvE~v 426 (433)
T 1uwv_A 393 -------TL-ARDSE-ALLKAGYTIARLAMLDMFPHTGHLESM 426 (433)
T ss_dssp -------HH-HHHHH-HHHHTTCEEEEEEEECCSTTSSCCEEE
T ss_pred -------HH-HhhHH-HHHHCCcEEEEEEEeccCCCCCeEEEE
Confidence 11 12343 4456799998854 3333444444443
No 255
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.47 E-value=2.4e-07 Score=95.64 Aligned_cols=103 Identities=18% Similarity=0.182 Sum_probs=72.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||++ +-.|+|+|+|..|+..++-.+... ++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~--------------------------g~--- 167 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC--------------------------GI--- 167 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH--------------------------TC---
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------CC---
Confidence 5679999999999999999986 368999999999998766322110 00
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEE---ee---cc----C-----Chhh-------HHHHHHHHHHh
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FI----D-----TAHN-------IVEYIEIISRI 323 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT---~F---FI----D-----ta~N-------i~~yi~~I~~~ 323 (397)
.++.++.+|+.++.. ...+.||+|++ |. .+ | +..+ -.+.|+.+.++
T Consensus 168 ----------~nv~~~~~D~~~~~~--~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~ 235 (479)
T 2frx_A 168 ----------SNVALTHFDGRVFGA--AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHA 235 (479)
T ss_dssp ----------CSEEEECCCSTTHHH--HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CcEEEEeCCHHHhhh--hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHh
Confidence 126678888876521 02468999997 32 11 1 1111 23678999999
Q ss_pred ccCCcEEEE
Q 015966 324 LKDGGVWIN 332 (397)
Q Consensus 324 LKPGG~wIN 332 (397)
|||||++|-
T Consensus 236 LkpGG~Lvy 244 (479)
T 2frx_A 236 LRPGGTLVY 244 (479)
T ss_dssp EEEEEEEEE
T ss_pred cCCCCEEEE
Confidence 999999983
No 256
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.45 E-value=4.6e-06 Score=83.94 Aligned_cols=96 Identities=24% Similarity=0.360 Sum_probs=59.8
Q ss_pred ceeEecccccccCCCCCCCCccEEEEee---ccCChh-----------------------------------hHHHHHHH
Q 015966 278 FSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAH-----------------------------------NIVEYIEI 319 (397)
Q Consensus 278 ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~-----------------------------------Ni~~yi~~ 319 (397)
+.-+.|.| |.-....++||+|++++ +|...+ |+..+|+.
T Consensus 134 ~~gvpgSF---y~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 134 VAGVPGSF---YRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp EEEEESCT---TSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecChhh---hcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34455665 33223478999999986 444221 55567999
Q ss_pred HHHhccCCcEEEE--ec-----CC-------cc-h-----hhhc--cCC--------CCCccccCCHHHHHHHHH-hCCC
Q 015966 320 ISRILKDGGVWIN--LG-----PL-------LY-H-----FADL--YGQ--------EDEMSIELSLEDVKRVAL-HYGF 368 (397)
Q Consensus 320 I~~~LKPGG~wIN--~G-----PL-------lY-h-----~~d~--~g~--------~~~~~ieLS~EEl~~ll~-~~GF 368 (397)
+++.|||||++|- .| |. +| . +.+. .|. ..-..+..|.+|++.+++ ..||
T Consensus 211 ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F 290 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSF 290 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSE
T ss_pred HHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCc
Confidence 9999999999993 22 11 11 0 1111 110 111245679999999998 5999
Q ss_pred EEEEEeec
Q 015966 369 EFEKEKTI 376 (397)
Q Consensus 369 eii~e~~i 376 (397)
+|.+.+..
T Consensus 291 ~I~~le~~ 298 (374)
T 3b5i_A 291 AIDKLVVY 298 (374)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99886533
No 257
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.43 E-value=2.4e-07 Score=95.56 Aligned_cols=101 Identities=13% Similarity=0.023 Sum_probs=71.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||+|||+|..+..||++ +-.|+|+|+|..|+..++-.+... +
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~--------------------------G---- 150 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW--------------------------G---- 150 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--------------------------C----
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C----
Confidence 5779999999999999999976 247999999999998766322110 0
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEE---ee---cc---------CChhhH-------HHHHHHHHHh
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FI---------DTAHNI-------VEYIEIISRI 323 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT---~F---FI---------Dta~Ni-------~~yi~~I~~~ 323 (397)
. . +.++.+|+.++.. ...+.||+|+. |. .+ .+..++ .+.|+.+.++
T Consensus 151 --------~-~-v~~~~~Da~~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~ 218 (464)
T 3m6w_A 151 --------A-P-LAVTQAPPRALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRL 218 (464)
T ss_dssp --------C-C-CEEECSCHHHHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTT
T ss_pred --------C-e-EEEEECCHHHhhh--hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 0 1 4567788877531 11478999985 21 11 111122 5689999999
Q ss_pred ccCCcEEE
Q 015966 324 LKDGGVWI 331 (397)
Q Consensus 324 LKPGG~wI 331 (397)
|||||++|
T Consensus 219 LkpGG~Lv 226 (464)
T 3m6w_A 219 LGPGGVLV 226 (464)
T ss_dssp EEEEEEEE
T ss_pred cCCCcEEE
Confidence 99999998
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.42 E-value=1.3e-06 Score=83.92 Aligned_cols=97 Identities=14% Similarity=0.050 Sum_probs=67.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~ 253 (397)
+++.|.+.... .++ +|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+
T Consensus 35 i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~---------------------- 88 (271)
T 3fut_A 35 HLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETL---------------------- 88 (271)
T ss_dssp HHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHT----------------------
T ss_pred HHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----------------------
Confidence 55555554432 246 9999999999999999999999999999999997665111
Q ss_pred CcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccCChhhHHHHHHH
Q 015966 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYIEI 319 (397)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta~Ni~~yi~~ 319 (397)
+ ..++.++.||+.++-. + ....+|.||.+ |+|.+. -+.++++.
T Consensus 89 -----------~---------~~~v~vi~~D~l~~~~-~-~~~~~~~iv~NlPy~iss~-il~~ll~~ 133 (271)
T 3fut_A 89 -----------S---------GLPVRLVFQDALLYPW-E-EVPQGSLLVANLPYHIATP-LVTRLLKT 133 (271)
T ss_dssp -----------T---------TSSEEEEESCGGGSCG-G-GSCTTEEEEEEECSSCCHH-HHHHHHHH
T ss_pred -----------C---------CCCEEEEECChhhCCh-h-hccCccEEEecCcccccHH-HHHHHhcC
Confidence 0 0137889999988632 1 11368999987 456553 35556654
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.35 E-value=6.9e-07 Score=89.73 Aligned_cols=113 Identities=16% Similarity=0.200 Sum_probs=74.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+||++|||+|.++.++++.+- .|+++|++..|+..|+--+ |.... + ... |
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~------------~~l~~--~---------~l~--d- 241 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYM------------RKTCG--D---------VLD--N- 241 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHC------------CC---------------CCS--S-
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH------------HHhcc--c---------ccc--c-
Confidence 578999999999999999999874 6999999999998876221 10000 0 000 0
Q ss_pred CCCCCCCCCcceeEecccccccCCC-CCCCCccEEEEeecc-C--Chh-hH--HHHHHHH----HHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDP-SQVGAWDAVVTCFFI-D--TAH-NI--VEYIEII----SRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~-~~~~~fD~VvT~FFI-D--ta~-Ni--~~yi~~I----~~~LKPGG~wIN 332 (397)
| ...++.++.+|.+++.... ...++||+|+.--+- . ..+ .+ .++++.+ .++|||||+++.
T Consensus 242 -p----~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~ 312 (364)
T 2qfm_A 242 -L----KGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 312 (364)
T ss_dssp -S----EETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -c----CCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 0 0124788999988753200 014789999976432 2 111 11 4666766 899999999995
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.35 E-value=8.1e-07 Score=87.93 Aligned_cols=149 Identities=10% Similarity=0.057 Sum_probs=91.2
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCC
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~ 252 (397)
.+++.+.+.... .+.+|||+|||+|.++..||+.+..|+|+|+|..|+..|+..+.. +
T Consensus 201 ~l~~~~~~~~~~----~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~----n-------------- 258 (369)
T 3bt7_A 201 QMLEWALDVTKG----SKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAA----N-------------- 258 (369)
T ss_dssp HHHHHHHHHTTT----CCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHHHHhhc----CCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 355555554432 246899999999999999999888999999999999887632210 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCcceeEecccccccC-CCCC------------CCCccEEEEeeccCChhhHHHHHHH
Q 015966 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DPSQ------------VGAWDAVVTCFFIDTAHNIVEYIEI 319 (397)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~-~~~~------------~~~fD~VvT~FFIDta~Ni~~yi~~ 319 (397)
. . .++.++.||..++.. .... .+.||+|+. |.... .+.+.
T Consensus 259 --------g------------~-~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~----dPPr~--g~~~~ 311 (369)
T 3bt7_A 259 --------H------------I-DNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFV----DPPRS--GLDSE 311 (369)
T ss_dssp --------T------------C-CSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEE----CCCTT--CCCHH
T ss_pred --------C------------C-CceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEE----CcCcc--ccHHH
Confidence 0 0 126677788766421 0000 137999974 54321 24566
Q ss_pred HHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec-CCCCCCCcccc
Q 015966 320 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI-ETTYTTNPRSM 387 (397)
Q Consensus 320 I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~~i-~~~Y~~d~~sm 387 (397)
+.+.|+|||.+|-+. -+ + ..-..++..+. + ||++.+.... .-+++..-+++
T Consensus 312 ~~~~l~~~g~ivyvs------c~-----p----~t~ard~~~l~-~-~y~~~~~~~~D~FP~T~HvE~v 363 (369)
T 3bt7_A 312 TEKMVQAYPRILYIS------CN-----P----ETLCKNLETLS-Q-THKVERLALFDQFPYTHHMQCG 363 (369)
T ss_dssp HHHHHTTSSEEEEEE------SC-----H----HHHHHHHHHHH-H-HEEEEEEEEECCSTTSSCCEEE
T ss_pred HHHHHhCCCEEEEEE------CC-----H----HHHHHHHHHHh-h-CcEEEEEEeeccCCCCCcEEEE
Confidence 777888999887321 00 0 11234555554 3 7998886633 34555555544
No 261
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.32 E-value=8.9e-07 Score=94.68 Aligned_cols=114 Identities=22% Similarity=0.164 Sum_probs=78.2
Q ss_pred HHHHHHhhCCCCCC-CCCCeEEEecCCCChhHH---HHHHcC-C--eEEEEeCCHHHHHHHHhhhhcccccCcccccccc
Q 015966 174 ILEELDALFPNRSK-ESPPACLVPGAGLGRLAL---EISHLG-F--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (397)
Q Consensus 174 Il~~L~~~~p~~~~-~~~~rVLvPGCGlGRLa~---eLA~~G-f--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi 246 (397)
|..+|....+.... .+...|||+|||+|-|+. ..++++ - +|.|+|-|. |...+..+.+. +.
T Consensus 341 I~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~----N~------- 408 (637)
T 4gqb_A 341 IYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQF----EE------- 408 (637)
T ss_dssp HHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHH----HT-------
T ss_pred HHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHh----cc-------
Confidence 44566666553221 244679999999999944 444433 2 589999997 65555544321 11
Q ss_pred ccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe---eccCChhhHHHHHHHHHHh
Q 015966 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRI 323 (397)
Q Consensus 247 ~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yi~~I~~~ 323 (397)
..+.+.++.||++++-. .++.|+||+= +|++-.. ..+.+....|.
T Consensus 409 ---------------------------~~dkVtVI~gd~eev~L----PEKVDIIVSEwMG~fLl~E~-mlevL~Ardr~ 456 (637)
T 4gqb_A 409 ---------------------------WGSQVTVVSSDMREWVA----PEKADIIVSELLGSFADNEL-SPECLDGAQHF 456 (637)
T ss_dssp ---------------------------TGGGEEEEESCTTTCCC----SSCEEEEECCCCBTTBGGGC-HHHHHHHHGGG
T ss_pred ---------------------------CCCeEEEEeCcceeccC----CcccCEEEEEcCcccccccC-CHHHHHHHHHh
Confidence 12348899999999854 3789999986 4665543 55888888999
Q ss_pred ccCCcEEE
Q 015966 324 LKDGGVWI 331 (397)
Q Consensus 324 LKPGG~wI 331 (397)
|||||+.|
T Consensus 457 LKPgGimi 464 (637)
T 4gqb_A 457 LKDDGVSI 464 (637)
T ss_dssp EEEEEEEE
T ss_pred cCCCcEEc
Confidence 99999999
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.32 E-value=6.5e-07 Score=89.81 Aligned_cols=111 Identities=12% Similarity=-0.023 Sum_probs=72.9
Q ss_pred CCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 190 PPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
+.+|||+|||+|.++..+|++ | ..|++||++..++..++.-+..... .+..|+-
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~------------------------~~~~~~~ 103 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFD------------------------GELRESK 103 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCC------------------------SCCEECS
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcc------------------------ccccccc
Confidence 468999999999999999998 4 5799999999999877743321100 0000000
Q ss_pred CCC-CCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 268 HPA-SAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 268 ~p~-~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
... .... .++.++.+|..++.. ...+.||+|+ +|..-...++++.+.+.|||||+++
T Consensus 104 ~~~~~~gl-~~i~v~~~Da~~~~~--~~~~~fD~I~----lDP~~~~~~~l~~a~~~lk~gG~l~ 161 (378)
T 2dul_A 104 GRAILKGE-KTIVINHDDANRLMA--ERHRYFHFID----LDPFGSPMEFLDTALRSAKRRGILG 161 (378)
T ss_dssp SEEEEESS-SEEEEEESCHHHHHH--HSTTCEEEEE----ECCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred ccccccCC-CceEEEcCcHHHHHH--hccCCCCEEE----eCCCCCHHHHHHHHHHhcCCCCEEE
Confidence 000 0001 126789999877532 1135799998 3443233588999999999999776
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.31 E-value=1.8e-06 Score=82.11 Aligned_cols=52 Identities=12% Similarity=0.018 Sum_probs=42.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHH
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.|.+.... .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++
T Consensus 17 i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~ 68 (255)
T 3tqs_A 17 VLQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQ 68 (255)
T ss_dssp HHHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHH
T ss_pred HHHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHH
Confidence 44444444332 25679999999999999999999999999999999998665
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.25 E-value=6.3e-06 Score=88.82 Aligned_cols=104 Identities=18% Similarity=0.217 Sum_probs=72.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--------------------------------------------CeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--------------------------------------------FISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--------------------------------------------f~V~GnD~S~~ML 224 (397)
++.+||||+||+|.++.+.|..+ ..+.|+|++..|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 45689999999999999999764 4799999999999
Q ss_pred HHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe
Q 015966 225 ICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC 304 (397)
Q Consensus 225 ~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~ 304 (397)
..|+.-+..+ +....+.+.++|+.++.. |...+.||+|||+
T Consensus 270 ~~A~~N~~~a--------------------------------------gv~~~i~~~~~D~~~~~~-~~~~~~~d~Iv~N 310 (703)
T 3v97_A 270 QRARTNARLA--------------------------------------GIGELITFEVKDVAQLTN-PLPKGPYGTVLSN 310 (703)
T ss_dssp HHHHHHHHHT--------------------------------------TCGGGEEEEECCGGGCCC-SCTTCCCCEEEEC
T ss_pred HHHHHHHHHc--------------------------------------CCCCceEEEECChhhCcc-ccccCCCCEEEeC
Confidence 9887332111 111237889999988642 2223489999998
Q ss_pred --ec--cCChhhHHHHHHHHHHh---ccCCcEEE
Q 015966 305 --FF--IDTAHNIVEYIEIISRI---LKDGGVWI 331 (397)
Q Consensus 305 --FF--IDta~Ni~~yi~~I~~~---LKPGG~wI 331 (397)
|- +....++.+..+.+.+. ++|||...
T Consensus 311 PPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ 344 (703)
T 3v97_A 311 PPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 344 (703)
T ss_dssp CCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccccchhHHHHHHHHHHHHHHhhCCCCeEE
Confidence 53 44445566655555555 45788766
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.25 E-value=2.9e-06 Score=88.75 Aligned_cols=124 Identities=17% Similarity=0.127 Sum_probs=78.3
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--------------------CCeEEEEeCCHHHHHHHHhhhh
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--------------------GFISQGNEFSYYMMICSSFILN 232 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--------------------Gf~V~GnD~S~~ML~~s~fiLn 232 (397)
+|++.+.+.+.. .++.+|||||||+|.+...+++. ...+.|+|++..|+..|+..+.
T Consensus 156 ~iv~~mv~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 156 PLIKTIIHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 355555544421 25679999999999998887754 2379999999999988874321
Q ss_pred cccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccC--
Q 015966 233 HTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID-- 308 (397)
Q Consensus 233 ~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFID-- 308 (397)
. |...+. |+ ....+..||++.... ...+.||+|+++ |-..
T Consensus 233 l-------------~gi~~~------------~~---------~~~~I~~gDtL~~~~--~~~~~fD~Vv~NPPf~~~~~ 276 (541)
T 2ar0_A 233 L-------------HDIEGN------------LD---------HGGAIRLGNTLGSDG--ENLPKAHIVATNPPFGSAAG 276 (541)
T ss_dssp T-------------TTCCCB------------GG---------GTBSEEESCTTSHHH--HTSCCEEEEEECCCCTTCSS
T ss_pred H-------------hCCCcc------------cc---------ccCCeEeCCCccccc--ccccCCeEEEECCCcccccc
Confidence 0 000000 00 114667888765321 124689999987 3211
Q ss_pred ----------ChhhHHHHHHHHHHhccCCcEEEEecC
Q 015966 309 ----------TAHNIVEYIEIISRILKDGGVWINLGP 335 (397)
Q Consensus 309 ----------ta~Ni~~yi~~I~~~LKPGG~wIN~GP 335 (397)
+...-..+++.+.+.|||||+.+-+-|
T Consensus 277 ~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 277 TNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 111124789999999999999885444
No 266
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.14 E-value=1.1e-06 Score=83.61 Aligned_cols=40 Identities=23% Similarity=0.216 Sum_probs=35.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCH-------HHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSY-------YMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~-------~ML~~s~ 228 (397)
++.+|||+|||+|+++..||++|..|+|+|+|. .|+..++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~ 129 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRAL 129 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHH
Confidence 456899999999999999999999999999999 7766554
No 267
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.13 E-value=5.5e-06 Score=86.88 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=32.6
Q ss_pred CeEEEecCCCChhHHHHHHc-----------------CCeEEEEeCCHHHHHHHHh
Q 015966 191 PACLVPGAGLGRLALEISHL-----------------GFISQGNEFSYYMMICSSF 229 (397)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~-----------------Gf~V~GnD~S~~ML~~s~f 229 (397)
.+||||+||+|.+...+++. ...+.|+|++..|+..|+.
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 49999999999998776542 4579999999999988774
No 268
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.11 E-value=8e-06 Score=77.41 Aligned_cols=50 Identities=12% Similarity=0.070 Sum_probs=38.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCe--EEEEeCCHHHHHHHH
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI--SQGNEFSYYMMICSS 228 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~--V~GnD~S~~ML~~s~ 228 (397)
+++.+.+.+.. .++.+|||+|||+|.++. +++ |.. |+|+|+|..|+..++
T Consensus 9 i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~ 60 (252)
T 1qyr_A 9 VIDSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQ 60 (252)
T ss_dssp HHHHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHH
T ss_pred HHHHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHH
Confidence 44444444332 256789999999999999 764 677 999999999997665
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.07 E-value=1.5e-05 Score=75.31 Aligned_cols=52 Identities=15% Similarity=0.076 Sum_probs=42.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHH
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSS 228 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G-f~V~GnD~S~~ML~~s~ 228 (397)
+++.|.+.... .++.+|||+|||+|.++..|+++| ..|+|+|+|..|+..++
T Consensus 19 i~~~iv~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~ 71 (249)
T 3ftd_A 19 VLKKIAEELNI---EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLK 71 (249)
T ss_dssp HHHHHHHHTTC---CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHT
T ss_pred HHHHHHHhcCC---CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHH
Confidence 56666665542 256799999999999999999996 89999999999986544
No 270
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.06 E-value=3.2e-05 Score=78.09 Aligned_cols=60 Identities=27% Similarity=0.228 Sum_probs=38.4
Q ss_pred HHHHHHhccCCcEEEE--ec--CC--------cch--hhhc--cCC--------CCCccccCCHHHHHHHHHhC-CCEEE
Q 015966 317 IEIISRILKDGGVWIN--LG--PL--------LYH--FADL--YGQ--------EDEMSIELSLEDVKRVALHY-GFEFE 371 (397)
Q Consensus 317 i~~I~~~LKPGG~wIN--~G--PL--------lYh--~~d~--~g~--------~~~~~ieLS~EEl~~ll~~~-GFeii 371 (397)
|+..++.|||||++|- +| .. +.. +.+. .|. .....+..|.+|++.++++. ||++.
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~ 287 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEIL 287 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEE
Confidence 8999999999999994 22 11 110 1110 110 11124568999999999987 59999
Q ss_pred EEeec
Q 015966 372 KEKTI 376 (397)
Q Consensus 372 ~e~~i 376 (397)
+.+..
T Consensus 288 ~le~~ 292 (384)
T 2efj_A 288 YLETF 292 (384)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 86533
No 271
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.06 E-value=4.8e-06 Score=84.14 Aligned_cols=99 Identities=18% Similarity=0.124 Sum_probs=71.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
++.+|||++||+|-++.++|++ | -.|++||++..++..++.-+.. +
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~----N--------------------------- 100 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL----N--------------------------- 100 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH----T---------------------------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH----h---------------------------
Confidence 4679999999999999999995 5 4799999999998876632211 0
Q ss_pred CCCCCCCCCCCc-ceeEecccccccC-CCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEE
Q 015966 266 DIHPASAGITEG-FSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 266 Dv~p~~~~~~~~-ls~~~GDF~ely~-~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wI 331 (397)
.+.++ +.++.+|..++.. . ..+.||+|+. |......++++.+.++|||||+++
T Consensus 101 -------gl~~~~v~v~~~Da~~~l~~~--~~~~fD~V~l----DP~g~~~~~l~~a~~~Lk~gGll~ 155 (392)
T 3axs_A 101 -------NIPEDRYEIHGMEANFFLRKE--WGFGFDYVDL----DPFGTPVPFIESVALSMKRGGILS 155 (392)
T ss_dssp -------TCCGGGEEEECSCHHHHHHSC--CSSCEEEEEE----CCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCCceEEEEeCCHHHHHHHh--hCCCCcEEEE----CCCcCHHHHHHHHHHHhCCCCEEE
Confidence 01122 5678889877532 1 1357999964 442223468999999999999776
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.05 E-value=8.5e-06 Score=88.06 Aligned_cols=116 Identities=15% Similarity=0.110 Sum_probs=75.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHH--HH--cC-----------CeEEEEeCCHHHHHHHHhhhhcccccC
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEI--SH--LG-----------FISQGNEFSYYMMICSSFILNHTETAG 238 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eL--A~--~G-----------f~V~GnD~S~~ML~~s~fiLn~~~~~~ 238 (397)
|...++..++.. .+...|||+|||+|-|+... |. .| ..|.|+|-|..+....+.+.. +
T Consensus 396 I~~al~d~~~~~--~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-----N 468 (745)
T 3ua3_A 396 VVGALKDLGADG--RKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-----R 468 (745)
T ss_dssp HHHHHHHHHTTC--CSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-----H
T ss_pred HHHHHHHhhccc--CCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-----c
Confidence 444455544321 24567999999999996432 22 23 389999999855543332110 1
Q ss_pred ccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCC--CCCCCCccEEEEe---eccCChhhH
Q 015966 239 EWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD--PSQVGAWDAVVTC---FFIDTAHNI 313 (397)
Q Consensus 239 ~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~--~~~~~~fD~VvT~---FFIDta~Ni 313 (397)
. ..+.+.++.||++++-.+ ....++.|+||+- +|++.. -.
T Consensus 469 g----------------------------------~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nE-L~ 513 (745)
T 3ua3_A 469 T----------------------------------WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNE-LS 513 (745)
T ss_dssp T----------------------------------TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGG-SH
T ss_pred C----------------------------------CCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchh-cc
Confidence 1 123378899999987431 0013789999986 477654 24
Q ss_pred HHHHHHHHHhccCCcEEE
Q 015966 314 VEYIEIISRILKDGGVWI 331 (397)
Q Consensus 314 ~~yi~~I~~~LKPGG~wI 331 (397)
.+.|..+.+.|||||+.|
T Consensus 514 pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 514 PECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHTTGGGSCTTCEEE
T ss_pred HHHHHHHHHhCCCCcEEE
Confidence 577888889999999999
No 273
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.02 E-value=2.6e-05 Score=81.76 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=73.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc-----CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccc
Q 015966 189 SPPACLVPGAGLGRLALEISHL-----GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 263 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-----Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~ 263 (397)
++.+||||+||+|.+...+++. ...+.|+|++..|+..|+.-+- . +++.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~--l------------------------~gi~ 274 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI--L------------------------HGVP 274 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH--H------------------------TTCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH--H------------------------cCCC
Confidence 5679999999999998888876 5689999999999988763221 0 0110
Q ss_pred cCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEe--eccC--------------------Chhh-HHHHHHHH
Q 015966 264 IPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID--------------------TAHN-IVEYIEII 320 (397)
Q Consensus 264 iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFID--------------------ta~N-i~~yi~~I 320 (397)
..++.+..||++...-+......||+||++ |-.. ...+ -..++..+
T Consensus 275 -----------~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~ 343 (542)
T 3lkd_A 275 -----------IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHG 343 (542)
T ss_dssp -----------GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHH
T ss_pred -----------cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHH
Confidence 012567788876531001124689999987 3111 0011 12479999
Q ss_pred HHhcc-CCcEEEEecC
Q 015966 321 SRILK-DGGVWINLGP 335 (397)
Q Consensus 321 ~~~LK-PGG~wIN~GP 335 (397)
.+.|| |||+..-+-|
T Consensus 344 l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 344 YYHLKQDNGVMAIVLP 359 (542)
T ss_dssp HHTBCTTTCEEEEEEE
T ss_pred HHHhCCCceeEEEEec
Confidence 99999 9999875444
No 274
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.01 E-value=2.3e-05 Score=76.64 Aligned_cols=108 Identities=16% Similarity=0.193 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+..+||++|-|.|..+.++.+. + -.|+.+|+...++.+++.-+ |-... + ..
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~l------------p~~~~--~---------~~---- 135 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYL------------PNHNA--G---------SY---- 135 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHC------------HHHHT--T---------GG----
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcC------------ccccc--c---------cc----
Confidence 4679999999999999999987 3 57999999999998776322 10000 0 00
Q ss_pred CCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeecc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 015966 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFI--Dta~Ni--~~yi~~I~~~LKPGG~wIN 332 (397)
-..++.++.+|.+++-. ...++||+|+.=.+- ..+..+ .++++.++++|||||+++.
T Consensus 136 -------~dpRv~v~~~Dg~~~l~--~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 136 -------DDPRFKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp -------GCTTEEEEESCTTTTTS--CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred -------CCCcEEEEechHHHHHh--hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 01247889999888643 346789999865431 111111 3799999999999999995
No 275
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.00 E-value=1.1e-05 Score=78.55 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=36.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+|||+|||+|.++..|+++ |..|+|+|.|..|+..|+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~ 67 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAE 67 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 5679999999999999999998 589999999999998776
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.99 E-value=1.4e-05 Score=76.17 Aligned_cols=145 Identities=17% Similarity=0.100 Sum_probs=82.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc-------C-------CeEEEEeCC---HHHHHHHHhhh----hcccccCccccccccc
Q 015966 189 SPPACLVPGAGLGRLALEISHL-------G-------FISQGNEFS---YYMMICSSFIL----NHTETAGEWNIYPWIH 247 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-------G-------f~V~GnD~S---~~ML~~s~fiL----n~~~~~~~~~IyPfi~ 247 (397)
+..+||++|+|+|..+..+++. + -.++++|.. ..||..+.... ..++. -...||-
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~--l~~~w~~-- 135 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQ--LQAQWPM-- 135 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHH--HHHTCCC--
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHH--HHHhccc--
Confidence 5679999999999988776543 2 368899954 47776442100 00000 0000110
Q ss_pred cccCCCCcccCccccccCCCCCCC-CCCCCcceeEecccccccCCCCCC----CCccEEEEeec-cCChhh--HHHHHHH
Q 015966 248 SNCNSLSDSDQLRPVSIPDIHPAS-AGITEGFSMCGGDFVEVYSDPSQV----GAWDAVVTCFF-IDTAHN--IVEYIEI 319 (397)
Q Consensus 248 ~~Sn~~s~~~qlr~v~iPDv~p~~-~~~~~~ls~~~GDF~ely~~~~~~----~~fD~VvT~FF-IDta~N--i~~yi~~ 319 (397)
.+|.+.-.. .....++.++.||..++.. ... ..||+|+--=| -...+. -.++|+.
T Consensus 136 ---------------~~~g~~r~~~~~~~~~l~l~~GDa~~~l~--~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~ 198 (257)
T 2qy6_A 136 ---------------PLPGCHRLLLDEGRVTLDLWFGDINELIS--QLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNA 198 (257)
T ss_dssp ---------------SCSEEEEEEEC--CEEEEEEESCHHHHGG--GSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHH
T ss_pred ---------------cccchhheeccCCceEEEEEECcHHHHHh--hcccccCCeEEEEEECCCCcccChhhcCHHHHHH
Confidence 001000000 0001247899999988543 112 27898853211 111111 2479999
Q ss_pred HHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 320 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 320 I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
++++|||||+++.+.. ...+++.+..+||++.+..
T Consensus 199 l~~~L~pGG~l~tysa--------------------a~~vrr~L~~aGF~v~~~~ 233 (257)
T 2qy6_A 199 MARLARPGGTLATFTS--------------------AGFVRRGLQEAGFTMQKRK 233 (257)
T ss_dssp HHHHEEEEEEEEESCC--------------------BHHHHHHHHHHTEEEEEEC
T ss_pred HHHHcCCCcEEEEEeC--------------------CHHHHHHHHHCCCEEEeCC
Confidence 9999999999995211 1257888889999988643
No 277
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.99 E-value=4.4e-06 Score=79.91 Aligned_cols=104 Identities=14% Similarity=0.093 Sum_probs=64.7
Q ss_pred CeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCC
Q 015966 191 PACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270 (397)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~ 270 (397)
.+|||+|||+|+.++++|.+|..|+|+|.|..|...++..+..+..... +...
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~-------------------~~~~-------- 142 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAE-------------------IGGW-------- 142 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTT-------------------THHH--------
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHh-------------------hhhh--------
Confidence 7999999999999999999999999999999987766654443321000 0000
Q ss_pred CCCCCCcceeEecccccccCCCCCCCCccEEEEe-eccCChhhHHHHHHHHHHhccCCc
Q 015966 271 SAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFIDTAHNIVEYIEIISRILKDGG 328 (397)
Q Consensus 271 ~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~-FFIDta~Ni~~yi~~I~~~LKPGG 328 (397)
+..++.++.+|..++.. ...+.||+|+.- -|-..... ..++...++|++.|
T Consensus 143 ---l~~~i~~~~~D~~~~L~--~~~~~fDvV~lDP~y~~~~~s--aavkk~~~~lr~l~ 194 (258)
T 2oyr_A 143 ---LQERLQLIHASSLTALT--DITPRPQVVYLDPMFPHKQKS--ALVKKEMRVFQSLV 194 (258)
T ss_dssp ---HHHHEEEEESCHHHHST--TCSSCCSEEEECCCCCCCCC-------HHHHHHHHHS
T ss_pred ---hhcCEEEEECCHHHHHH--hCcccCCEEEEcCCCCCcccc--hHHHHHHHHHHHhh
Confidence 01247889999887532 122479999764 23222111 34555666666644
No 278
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.98 E-value=3.3e-05 Score=84.75 Aligned_cols=39 Identities=18% Similarity=0.055 Sum_probs=34.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-----CeEEEEeCCHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLG-----FISQGNEFSYYMMICS 227 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G-----f~V~GnD~S~~ML~~s 227 (397)
++.+|||||||+|.+...++++. ..+.|+|++..++..|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 57799999999999999999864 4689999999999888
No 279
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.98 E-value=1.8e-05 Score=79.29 Aligned_cols=148 Identities=14% Similarity=0.081 Sum_probs=88.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc------------------CCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 189 SPPACLVPGAGLGRLALEISHL------------------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~------------------Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
+..+|+|+||++|..+..++.. .++|..||+..-+....-..|. +|.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~-----------~~~---- 115 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP-----------IEN---- 115 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTT-----------TSC----
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcc-----------hhc----
Confidence 4678999999999988766554 3678888888776532211110 000
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEee---ccCC------------------
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDT------------------ 309 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~F---FIDt------------------ 309 (397)
. .. +++- +.-+.|.| |.-....+++|+|++.+ ++..
T Consensus 116 ~----~~--~~~f--------------~~gvpgSF---y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~ 172 (359)
T 1m6e_X 116 D----VD--GVCF--------------INGVPGSF---YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTC 172 (359)
T ss_dssp S----CT--TCEE--------------EEEEESCS---SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSS
T ss_pred c----cC--CCEE--------------EEecchhh---hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCC
Confidence 0 00 0000 23344555 43334578999999886 3322
Q ss_pred ------------hhhHHHHHHHHHHhccCCcEEEE-------ecC------Ccch-hhhc------cCC--C------CC
Q 015966 310 ------------AHNIVEYIEIISRILKDGGVWIN-------LGP------LLYH-FADL------YGQ--E------DE 349 (397)
Q Consensus 310 ------------a~Ni~~yi~~I~~~LKPGG~wIN-------~GP------LlYh-~~d~------~g~--~------~~ 349 (397)
..|...+|+..++.|||||++|- .+| .+|. .... .|. . .-
T Consensus 173 p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~ 252 (359)
T 1m6e_X 173 PQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNI 252 (359)
T ss_dssp CCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCC
Confidence 13455679999999999999993 222 2231 1110 121 0 11
Q ss_pred ccccCCHHHHHHHHHhC-CCEEEEEe
Q 015966 350 MSIELSLEDVKRVALHY-GFEFEKEK 374 (397)
Q Consensus 350 ~~ieLS~EEl~~ll~~~-GFeii~e~ 374 (397)
..+..|.+|++.++++. +|++.+.+
T Consensus 253 P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 253 PQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp CCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred CccCCCHHHHHHHHHHcCCceEEEEE
Confidence 24567999999999988 55887744
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.94 E-value=1.6e-05 Score=70.84 Aligned_cols=46 Identities=9% Similarity=-0.176 Sum_probs=39.6
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCC-hhHHHHHH-cCCeEEEEeCCHHH
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLG-RLALEISH-LGFISQGNEFSYYM 223 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlG-RLa~eLA~-~Gf~V~GnD~S~~M 223 (397)
.|.++|.+.+. .+.+||++|||.| |.|..||+ .|++|+++|++...
T Consensus 24 ~LaeYI~~~~~-----~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~A 71 (153)
T 2k4m_A 24 DLAVYIIRCSG-----PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH 71 (153)
T ss_dssp HHHHHHHHHSC-----SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSS
T ss_pred HHHHHHHhcCC-----CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccc
Confidence 37788887764 4569999999999 89999997 99999999999854
No 281
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.89 E-value=1.2e-05 Score=81.88 Aligned_cols=40 Identities=10% Similarity=-0.073 Sum_probs=37.8
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHh
Q 015966 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF 229 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~f 229 (397)
+.+|||+|||+|..+..||+.|..|+|+|+|..|+..++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~ 133 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARH 133 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHH
Confidence 6799999999999999999999999999999999998873
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.86 E-value=1.7e-05 Score=76.36 Aligned_cols=40 Identities=15% Similarity=0.030 Sum_probs=37.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----EEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFI----SQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~----V~GnD~S~~ML~~s~ 228 (397)
++.+|||+|||+|.++..|+++|.. |+|+|+|..|+..++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~ 85 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLE 85 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHH
Confidence 5679999999999999999999988 999999999998765
No 283
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.75 E-value=0.00015 Score=70.60 Aligned_cols=40 Identities=8% Similarity=-0.050 Sum_probs=35.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+|||+|||+|..+..||.+ +-.|+|+|+|..|+..++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~ 144 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 144 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 5679999999999999999985 258999999999998766
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.60 E-value=9.6e-05 Score=74.66 Aligned_cols=113 Identities=14% Similarity=0.141 Sum_probs=74.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
++.+||++|-|.|..+.++.+..- .|+.+|+...++.+++--+ |..... ....
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yf------------p~~~~~-----------~~d~--- 258 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYM------------RKTCGD-----------VLDN--- 258 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHC------------CC---------------CCSS---
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhc------------hhhhhh-----------hhcc---
Confidence 457999999999999999998654 6999999999998776211 111000 0000
Q ss_pred CCCCCCCCCcceeEecccccccCC-CCCCCCccEEEEeecc---CC-----hhhH--HHHHHHHHHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCFFI---DT-----AHNI--VEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~-~~~~~~fD~VvT~FFI---Dt-----a~Ni--~~yi~~I~~~LKPGG~wIN 332 (397)
+..+++.++.+|.+++-.. +...++||+|+.=.|- .+ +..+ .++++.++++|||||+++.
T Consensus 259 -----pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 259 -----LKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp -----SEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -----ccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1113478888998764310 0124689999876542 11 1122 4688999999999999996
No 285
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.57 E-value=0.00053 Score=63.48 Aligned_cols=99 Identities=14% Similarity=0.028 Sum_probs=66.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
+..+||+.|| |.-+..+|++ |-.|+.+|.+..+...++-.+..+.-+
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~------------------------------ 77 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA------------------------------ 77 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC------------------------------
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC------------------------------
Confidence 3469999998 5788888887 789999999999998777444321100
Q ss_pred CCCCCCCCCcceeEecccccc-----------------c-----CCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhcc
Q 015966 268 HPASAGITEGFSMCGGDFVEV-----------------Y-----SDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK 325 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~el-----------------y-----~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LK 325 (397)
...++.++.||..+. | .. ...+.||+| |||-.. ...|+..+.+.||
T Consensus 78 ------~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~-~~~~~fDlI----fIDg~k-~~~~~~~~l~~l~ 145 (202)
T 3cvo_A 78 ------EGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRT-EGFRHPDVV----LVDGRF-RVGCALATAFSIT 145 (202)
T ss_dssp ------TTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGC-TTCCCCSEE----EECSSS-HHHHHHHHHHHCS
T ss_pred ------CCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhcc-ccCCCCCEE----EEeCCC-chhHHHHHHHhcC
Confidence 011244555554332 1 00 123689998 577653 3488888889999
Q ss_pred CCcEEE
Q 015966 326 DGGVWI 331 (397)
Q Consensus 326 PGG~wI 331 (397)
|||+.|
T Consensus 146 ~GG~Iv 151 (202)
T 3cvo_A 146 RPVTLL 151 (202)
T ss_dssp SCEEEE
T ss_pred CCeEEE
Confidence 999998
No 286
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.57 E-value=0.00043 Score=67.19 Aligned_cols=116 Identities=8% Similarity=-0.016 Sum_probs=70.0
Q ss_pred hchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHHhhhhcccccCcccccccc
Q 015966 169 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (397)
Q Consensus 169 ~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi 246 (397)
.+.-.+++..++.+- ++..+|||+|||.|..+...|++ |. .|.|+|++..|.. + |
T Consensus 58 RaA~KL~ei~ek~~l----~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~----------~-------p-- 114 (277)
T 3evf_A 58 RGTAKLRWFHERGYV----KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHE----------K-------P-- 114 (277)
T ss_dssp THHHHHHHHHHTTSS----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCC----------C-------C--
T ss_pred cHHHHHHHHHHhCCC----CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcc----------c-------c--
Confidence 334457777776332 35669999999999999988876 54 5788888865410 0 0
Q ss_pred ccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChh------hHHHHHHHH
Q 015966 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH------NIVEYIEII 320 (397)
Q Consensus 247 ~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~------Ni~~yi~~I 320 (397)
+|.. ..+.++..+.+++ ++... ..+.||+|++-...++.. ..+..++.+
T Consensus 115 -----------------i~~~-----~~g~~ii~~~~~~-dv~~l--~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a 169 (277)
T 3evf_A 115 -----------------MNVQ-----SLGWNIITFKDKT-DIHRL--EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTV 169 (277)
T ss_dssp -----------------CCCC-----BTTGGGEEEECSC-CTTTS--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -----------------cccC-----cCCCCeEEEeccc-eehhc--CCCCccEEEecCccCcCchHHHHHHHHHHHHHH
Confidence 0000 0001233344443 32221 247899999865333211 122347888
Q ss_pred HHhccCC-cEEEE
Q 015966 321 SRILKDG-GVWIN 332 (397)
Q Consensus 321 ~~~LKPG-G~wIN 332 (397)
.++|||| |.||-
T Consensus 170 ~~~LkpG~G~FV~ 182 (277)
T 3evf_A 170 EKWLACGVDNFCV 182 (277)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHhCCCCCeEEE
Confidence 9999999 99995
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.53 E-value=0.00013 Score=69.94 Aligned_cols=55 Identities=20% Similarity=0.147 Sum_probs=45.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhh
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL 231 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiL 231 (397)
.+++.|.+.+. .++..||||+||+|.++..++++|..+.|+|++..|+..|+--+
T Consensus 223 ~l~~~~i~~~~----~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 223 ELAERLVRMFS----FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp HHHHHHHHHHC----CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 35555555543 25679999999999999999999999999999999998877433
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.41 E-value=0.001 Score=64.40 Aligned_cols=158 Identities=13% Similarity=0.120 Sum_probs=86.8
Q ss_pred HHHHHHhccccc----ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-------CCeEEEEeC
Q 015966 151 IIRNIVRDWAAE----GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-------GFISQGNEF 219 (397)
Q Consensus 151 tL~q~~RDWS~e----G~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-------Gf~V~GnD~ 219 (397)
.++.+-+||... ...+|-.....++..+... ....+||+.|+..|+-+..+|.. +-.|+++|.
T Consensus 70 ~~r~~g~~~~~~~~tmv~~~r~~~L~~l~~~v~~~------~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~Dt 143 (282)
T 2wk1_A 70 EVRNEGRDWPANAHTMIGIKRLENIRQCVEDVIGN------NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADS 143 (282)
T ss_dssp HHHHTTCSCBSSCSCSSHHHHHHHHHHHHHHHHHT------TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEEC
T ss_pred HHHhccccCCcccccccCHHHHHHHHHHHHHHHhc------CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEEC
Confidence 477888999654 3467766555566655542 14569999999999988887653 557889986
Q ss_pred CHHHHHHHHhhhhcccccCccccccccccccC-CCCcccCccccccCCCCCCCCCC-CCcceeEecccccccCCCCCCCC
Q 015966 220 SYYMMICSSFILNHTETAGEWNIYPWIHSNCN-SLSDSDQLRPVSIPDIHPASAGI-TEGFSMCGGDFVEVYSDPSQVGA 297 (397)
Q Consensus 220 S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn-~~s~~~qlr~v~iPDv~p~~~~~-~~~ls~~~GDF~ely~~~~~~~~ 297 (397)
-..+-..+.- ..... ..+.+ +.+.. ......+.|. .+. ..+. .+++.++.|||.+.... ...++
T Consensus 144 feG~pe~~~~--~~~~d-~~~~~----~~~~~~~~~~~~~ar~-n~~-----~~gl~~~~I~li~Gda~etL~~-~~~~~ 209 (282)
T 2wk1_A 144 FQGIPDVGED--GYAGD-RKMAL----HRRNSVLAVSEEEVRR-NFR-----NYDLLDEQVRFLPGWFKDTLPT-APIDT 209 (282)
T ss_dssp SSCSCCCCTT--SCHHH-HHHCG----GGGHHHHCCCHHHHHH-HHH-----HTTCCSTTEEEEESCHHHHSTT-CCCCC
T ss_pred CCCCCccccc--ccccc-ccccc----ccccccchhHHHHHHH-HHH-----HcCCCcCceEEEEeCHHHHHhh-CCCCC
Confidence 4322000000 00000 00000 00000 0000000000 000 0011 24589999999885431 12356
Q ss_pred ccEEEEeeccCCh--hhHHHHHHHHHHhccCCcEEEE
Q 015966 298 WDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 298 fD~VvT~FFIDta--~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
||+| |||.. .+..+||+.++..|+|||+.|-
T Consensus 210 ~d~v----fIDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 210 LAVL----RMDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp EEEE----EECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEE----EEcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 7766 66654 3567899999999999999994
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.35 E-value=0.0018 Score=65.22 Aligned_cols=120 Identities=13% Similarity=0.091 Sum_probs=81.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
++.+|||+||..|.-++.|+++|-.|+|+|... |--. +.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~~----l~------------------------------------ 249 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQS----LM------------------------------------ 249 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCHH----HH------------------------------------
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cChh----hc------------------------------------
Confidence 688999999999999999999999999999874 3100 00
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCC---cEEEEec-CCcchhhhcc
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG---GVWINLG-PLLYHFADLY 344 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPG---G~wIN~G-PLlYh~~d~~ 344 (397)
...++.++++|..++.. ..+.+|+||+ |-+.+....++.+.+.|..| +...|+= |+...++
T Consensus 250 -----~~~~V~~~~~d~~~~~~---~~~~~D~vvs----Dm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~--- 314 (375)
T 4auk_A 250 -----DTGQVTWLREDGFKFRP---TRSNISWMVC----DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYE--- 314 (375)
T ss_dssp -----TTTCEEEECSCTTTCCC---CSSCEEEEEE----CCSSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHH---
T ss_pred -----cCCCeEEEeCccccccC---CCCCcCEEEE----cCCCChHHhHHHHHHHHhccccceEEEEEEecccchHH---
Confidence 01236788899877532 2468999988 76777667777777777665 5555532 2221111
Q ss_pred CCCCCccccCCHHHHHHHHHhCCCEE
Q 015966 345 GQEDEMSIELSLEDVKRVALHYGFEF 370 (397)
Q Consensus 345 g~~~~~~ieLS~EEl~~ll~~~GFei 370 (397)
.+.--.+.+...+...||..
T Consensus 315 ------~l~~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 315 ------EVSHNLAYIQAQLDEHGINA 334 (375)
T ss_dssp ------HHHHHHHHHHHHHHHTTCCE
T ss_pred ------HHHHHHHHHHHHHHhcCcch
Confidence 12234566777888888864
No 290
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.96 E-value=0.0049 Score=64.24 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=31.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc---------------CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHL---------------GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---------------Gf~V~GnD~S~~ML~~s~ 228 (397)
.+.+||||+||+|.+....++. -..+.|+|+...|...|+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~ 271 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQ 271 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHH
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHH
Confidence 5679999999999997665432 245899999999887766
No 291
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.87 E-value=0.0021 Score=62.47 Aligned_cols=50 Identities=8% Similarity=-0.052 Sum_probs=37.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHH
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYM 223 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~M 223 (397)
+.-.+++..++.+ - .++.+|||+|||.|..+...+++ |. .|.|+|++..|
T Consensus 75 AAfKL~ei~eK~~-L---k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~ 126 (282)
T 3gcz_A 75 GSAKLRWMEERGY-V---KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQG 126 (282)
T ss_dssp HHHHHHHHHHTTS-C---CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred HHHHHHHHHHhcC-C---CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCc
Confidence 4445777776642 1 35679999999999999988854 54 58899999865
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.76 E-value=0.0024 Score=62.22 Aligned_cols=41 Identities=12% Similarity=-0.148 Sum_probs=37.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHh
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF 229 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~f 229 (397)
++..+||.+||.|..+..|+++|..|+|+|.++.|+..|+-
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 56799999999999999999998899999999999987763
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.70 E-value=0.0026 Score=61.33 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=59.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHH--HHHHHHhhhhcccccCccccccccccccCCCCcccCccccc
Q 015966 188 ESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYY--MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 263 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~--ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~ 263 (397)
+++.+|||+||+-|.-+...|++ |. .|.|..+... ++ ++.
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~------------------------------------P~~ 115 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEE------------------------------------PML 115 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCC------------------------------------CCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccC------------------------------------CCc
Confidence 47899999999999999888876 22 3445444332 10 000
Q ss_pred cCCCCCCCCCCCCc---ceeEec-ccccccCCCCCCCCccEEEEee-------ccCChhhHHHHHHHHHHhccCCc-EEE
Q 015966 264 IPDIHPASAGITEG---FSMCGG-DFVEVYSDPSQVGAWDAVVTCF-------FIDTAHNIVEYIEIISRILKDGG-VWI 331 (397)
Q Consensus 264 iPDv~p~~~~~~~~---ls~~~G-DF~ely~~~~~~~~fD~VvT~F-------FIDta~Ni~~yi~~I~~~LKPGG-~wI 331 (397)
+...+ +.|.+| ||+++- ...+|+|++=. .+|.+.-+ ..|+-..++||||| .|+
T Consensus 116 ---------~~~~Gv~~i~~~~G~Df~~~~-----~~~~DvVLSDMAPnSG~~~vD~~Rs~-~aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 116 ---------MQSYGWNIVTMKSGVDVFYKP-----SEISDTLLCDIGESSPSAEIEEQRTL-RILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp ---------CCSTTGGGEEEECSCCGGGSC-----CCCCSEEEECCCCCCSCHHHHHHHHH-HHHHHHHHHHTTCCSEEE
T ss_pred ---------ccCCCceEEEeeccCCccCCC-----CCCCCEEEeCCCCCCCccHHHHHHHH-HHHHHHHHHhhcCCcEEE
Confidence 00012 355557 998853 35799999742 34444333 36767779999999 777
Q ss_pred E
Q 015966 332 N 332 (397)
Q Consensus 332 N 332 (397)
-
T Consensus 181 v 181 (269)
T 2px2_A 181 I 181 (269)
T ss_dssp E
T ss_pred E
Confidence 4
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.58 E-value=0.0082 Score=58.82 Aligned_cols=73 Identities=12% Similarity=-0.004 Sum_probs=47.1
Q ss_pred chhhHHHHHHHHHHhcccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCC
Q 015966 143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFS 220 (397)
Q Consensus 143 ~d~dkv~stL~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S 220 (397)
.|...+|..|+.=... +..=|..++-.+++..++.+- +++.+|||+||+.|..+..++++ |. .|.|+|++
T Consensus 43 ~dr~~ar~~l~~~~~~----~g~yrSRaa~KL~ei~ek~l~----~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg 114 (300)
T 3eld_A 43 VDRTAARRYLKEGRTD----VGISVSRGAAKIRWLHERGYL----RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLG 114 (300)
T ss_dssp ECCHHHHHHHHHTCSS----SCCCSSTTHHHHHHHHHHTSC----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred ccHHHHHHHHHcCCcc----CCCccchHHHHHHHHHHhCCC----CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEec
Confidence 4455666666543211 011233344457777766321 36789999999999999999975 54 58899998
Q ss_pred HHH
Q 015966 221 YYM 223 (397)
Q Consensus 221 ~~M 223 (397)
..|
T Consensus 115 ~~~ 117 (300)
T 3eld_A 115 IEG 117 (300)
T ss_dssp CTT
T ss_pred ccc
Confidence 754
No 295
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.28 E-value=0.0077 Score=56.46 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=42.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHH
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.|.+.+. .++..||||.||+|..+...+++|..+.|+|++..++..|+
T Consensus 201 l~~~~i~~~~----~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 201 LIERIIRASS----NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHHC----CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 5555555543 25679999999999999999999999999999999988776
No 296
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.07 E-value=0.071 Score=52.13 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=35.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~ 228 (397)
.+.+|||+-||.|.+...+.++|++ |.++|++...+.+.+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~ 50 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYE 50 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHH
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHH
Confidence 4579999999999999999999997 568999998876554
No 297
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=95.59 E-value=0.045 Score=54.53 Aligned_cols=109 Identities=16% Similarity=0.078 Sum_probs=69.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 188 ESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
.++.+|||..||-|.=+..||.+|- .|+++|+|..=+...+-.+....- +.+
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~-----------------------~~~--- 200 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVP-----------------------EEI--- 200 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSC-----------------------TTT---
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhh-----------------------hhh---
Confidence 3678999999999999999999876 599999999876544433321100 000
Q ss_pred CCCCCCCCCCCcceeEecccccccCCCCCCCCccEEEE---e-----ecc---------CChhhH-------HHHHHHHH
Q 015966 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---C-----FFI---------DTAHNI-------VEYIEIIS 321 (397)
Q Consensus 266 Dv~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT---~-----FFI---------Dta~Ni-------~~yi~~I~ 321 (397)
....++.....|.+.+.. ...+.||.|+. | -.+ .+..++ .+.|+...
T Consensus 201 -------~~~~~v~v~~~D~~~~~~--~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~ 271 (359)
T 4fzv_A 201 -------RDGNQVRVTSWDGRKWGE--LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGL 271 (359)
T ss_dssp -------TTSSSEEEECCCGGGHHH--HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHH
T ss_pred -------ccCCceEEEeCchhhcch--hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 011235667778766421 12478999983 1 011 111222 24678888
Q ss_pred HhccCCcEEE
Q 015966 322 RILKDGGVWI 331 (397)
Q Consensus 322 ~~LKPGG~wI 331 (397)
++|||||++|
T Consensus 272 ~~lkpGG~LV 281 (359)
T 4fzv_A 272 LATKPGGHVV 281 (359)
T ss_dssp HTEEEEEEEE
T ss_pred hcCCCCcEEE
Confidence 9999999998
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.38 E-value=0.043 Score=54.20 Aligned_cols=73 Identities=15% Similarity=0.186 Sum_probs=45.4
Q ss_pred eEecccccccCCCCCCCCccEEEEeec------cCCh----hhHHH-HHHHHHHhccCCcEEEEecCCcchhhhccCCCC
Q 015966 280 MCGGDFVEVYSDPSQVGAWDAVVTCFF------IDTA----HNIVE-YIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (397)
Q Consensus 280 ~~~GDF~ely~~~~~~~~fD~VvT~FF------IDta----~Ni~~-yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~ 348 (397)
+++||+.+++. .+.||+|++=.. .|.. ..+.+ .++-+.+.|||||.|+-- .|+..
T Consensus 156 ~IqGD~~~~~~----~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK-----VFQGs----- 221 (344)
T 3r24_A 156 TLIGDCATVHT----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK-----ITEHS----- 221 (344)
T ss_dssp EEESCGGGEEE----SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE-----ECSSS-----
T ss_pred EEEcccccccc----CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE-----EecCC-----
Confidence 38899887654 478999997532 3322 22444 455566899999999941 12221
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 349 EMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 349 ~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
. .+++.++.+ -|+-++..
T Consensus 222 ----g--~~~L~~lrk--~F~~VK~f 239 (344)
T 3r24_A 222 ----W--NADLYKLMG--HFSWWTAF 239 (344)
T ss_dssp ----C--CHHHHHHHT--TEEEEEEE
T ss_pred ----C--HHHHHHHHh--hCCeEEEE
Confidence 1 255666663 58877644
No 299
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.36 E-value=0.075 Score=53.03 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=33.5
Q ss_pred CeEEEecCCCChhHHHHHHcCCeE-EEEeCCHHHHHHHH
Q 015966 191 PACLVPGAGLGRLALEISHLGFIS-QGNEFSYYMMICSS 228 (397)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~Gf~V-~GnD~S~~ML~~s~ 228 (397)
.+|||+-||.|.++..+.++||++ .++|++...+.+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~ 41 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHA 41 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHH
Confidence 589999999999999999999985 59999998876544
No 300
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.34 E-value=0.21 Score=49.07 Aligned_cols=158 Identities=11% Similarity=0.048 Sum_probs=86.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCC
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPD 266 (397)
+...|+.+|||+...++.|... +..+.-+|+ +.++..-+-++........ .+. . .. .-|.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~-~l~----~-------~~-----~~~~ 158 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRI-SLG----L-------SK-----EDTA 158 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHH-HHT----C-------CS-----SCCC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhh-hcc----c-------cc-----cccc
Confidence 3568999999999999999875 556677777 5555443333322100000 000 0 00 0000
Q ss_pred CCCCCCCCCCcceeEeccccccc-------CCCCCCCCccEEEEe---eccCChhhHHHHHHHHHHhccCCcEEEEe---
Q 015966 267 IHPASAGITEGFSMCGGDFVEVY-------SDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGGVWINL--- 333 (397)
Q Consensus 267 v~p~~~~~~~~ls~~~GDF~ely-------~~~~~~~~fD~VvT~---FFIDta~Ni~~yi~~I~~~LKPGG~wIN~--- 333 (397)
.... .....+..++.+|+++.. ..+ ..+...++++- .|++.. .+...|+.|.+.+ |||.||++
T Consensus 159 ~~~~-~~~~~~~~~v~~DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~-~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 159 KSPF-LIDQGRYKLAACDLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNN-ESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp CTTE-EEECSSEEEEECCTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHH-HHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cccc-ccCCCceEEEecCCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHH-HHHHHHHHHHhhC-CCcEEEEEecc
Confidence 0000 001245788999988731 111 12334455432 467764 4778899999887 88999864
Q ss_pred cC---C-------cchhhhccCCCCCccc--cCCHHHHHHHHHhCCCE
Q 015966 334 GP---L-------LYHFADLYGQEDEMSI--ELSLEDVKRVALHYGFE 369 (397)
Q Consensus 334 GP---L-------lYh~~d~~g~~~~~~i--eLS~EEl~~ll~~~GFe 369 (397)
+| . ..++....| .+-.++ -.+.++..+.+.+.||+
T Consensus 235 ~~~~~~~~fg~~m~~~l~~~rg-~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 235 GGSQPNDRFGAIMQSNLKESRN-LEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp CCCSTTCCHHHHHHHHHHHHHC-CCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred CCCCCcchHHHHHHHHhhcccC-CcccccccCCCHHHHHHHHHHCCCC
Confidence 33 1 122222011 111122 25999999999999998
No 301
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.30 E-value=0.028 Score=49.41 Aligned_cols=39 Identities=21% Similarity=0.129 Sum_probs=31.6
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (397)
+++.+||+.|+ |.|+.+..+++ .|+.|.+++.+...+..
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~ 78 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM 78 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 36789999994 78888777765 59999999999887643
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.96 E-value=0.011 Score=58.11 Aligned_cols=72 Identities=24% Similarity=0.436 Sum_probs=51.4
Q ss_pred ceeEecccccccCCCCCCCCccEEEEeeccC---ChhhH----HHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCc
Q 015966 278 FSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---TAHNI----VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEM 350 (397)
Q Consensus 278 ls~~~GDF~ely~~~~~~~~fD~VvT~FFID---ta~Ni----~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~ 350 (397)
+.+..||..+.... -...++|+| |+| .+.|. .++|+.|+++|+|||+++. |.
T Consensus 168 L~l~~GDa~~~l~~-l~~~~~Da~----flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT-----Yt----------- 226 (308)
T 3vyw_A 168 LKVLLGDARKRIKE-VENFKADAV----FHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS-----YS----------- 226 (308)
T ss_dssp EEEEESCHHHHGGG-CCSCCEEEE----EECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE-----SC-----------
T ss_pred EEEEechHHHHHhh-hcccceeEE----EeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE-----Ee-----------
Confidence 67889998775431 123468877 444 33333 4799999999999999995 21
Q ss_pred cccCCHHHHHHHHHhCCCEEEEEe
Q 015966 351 SIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 351 ~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
+.-.+++.|+++||++.+..
T Consensus 227 ----aag~VRR~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 227 ----SSLSVRKSLLTLGFKVGSSR 246 (308)
T ss_dssp ----CCHHHHHHHHHTTCEEEEEE
T ss_pred ----CcHHHHHHHHHCCCEEEecC
Confidence 23468889999999998854
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.95 E-value=0.17 Score=49.60 Aligned_cols=39 Identities=10% Similarity=0.004 Sum_probs=34.1
Q ss_pred CCeEEEecCCCChhHHHHHHcC--Ce-EEEEeCCHHHHHHHH
Q 015966 190 PPACLVPGAGLGRLALEISHLG--FI-SQGNEFSYYMMICSS 228 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~G--f~-V~GnD~S~~ML~~s~ 228 (397)
+.+|||+-||.|.+...+.++| ++ |.++|++..++.+.+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~ 43 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYK 43 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHH
Confidence 4589999999999999999999 44 789999999887655
No 304
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.89 E-value=0.012 Score=58.15 Aligned_cols=41 Identities=22% Similarity=0.154 Sum_probs=34.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|||. |.++..+|+ +|. .|.++|.|...+..++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 3678999999986 999999988 499 8999999998876543
No 305
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.85 E-value=0.032 Score=54.36 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=34.2
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..+|+ +|. .|.++|.|..-+..++
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~ 232 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAK 232 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 3678999999986 899999988 498 6999999998876554
No 306
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.74 E-value=0.019 Score=55.13 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=34.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..+|+. |+.|.+++.|..-+..++
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 207 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR 207 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 3678999999985 9999999885 999999999998876544
No 307
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.66 E-value=0.034 Score=53.74 Aligned_cols=41 Identities=12% Similarity=-0.056 Sum_probs=33.8
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..+|+. |+ .|.++|.+..-+..++
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 208 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL 208 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 3678999999986 8899999886 98 7999999988765544
No 308
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.65 E-value=0.038 Score=54.12 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=33.5
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+|. |.++..+|+. |+ .|.+++.|..-+..++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 224 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAE 224 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 678999999976 8889999885 99 8999999988776544
No 309
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.63 E-value=0.037 Score=53.60 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=33.7
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CCe-EEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISHL-GFI-SQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf~-V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+|. |.++..||+. |.. |.+.+.|..-+..++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 221 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAK 221 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 678999999876 8899999885 997 999999998776554
No 310
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=94.48 E-value=0.093 Score=51.64 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=75.8
Q ss_pred chhhHHHHHHHHHHhcccccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCC
Q 015966 143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFS 220 (397)
Q Consensus 143 ~d~dkv~stL~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S 220 (397)
.|...++..|+.=.-+ +..=|...--.+++.+++ +-- +++.+|||+||++|..+...|.+ |. .|.|+|+-
T Consensus 56 vdr~~ar~~l~~g~~~----~g~y~SR~~~KL~ei~~~-~~l---~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG 127 (321)
T 3lkz_A 56 VDRSAAKHARKEGNVT----GGHPVSRGTAKLRWLVER-RFL---EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKG 127 (321)
T ss_dssp ECCHHHHHHHHHTCCS----SCCCSSTHHHHHHHHHHT-TSC---CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCC
T ss_pred echHHHHHHHhcCcCc----CCCccchHHHHHHHHHHh-cCC---CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcC
Confidence 5566677776643222 011111111235555555 322 35679999999999999866655 65 48999987
Q ss_pred HHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEec-ccccccCCCCCCCCcc
Q 015966 221 YYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGG-DFVEVYSDPSQVGAWD 299 (397)
Q Consensus 221 ~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~G-DF~ely~~~~~~~~fD 299 (397)
..= + . .|-.. .|+ . -..+.+..+ |+..+. ...+|
T Consensus 128 ~~~---------h-e-------~P~~~---------~ql--------~------w~lV~~~~~~Dv~~l~-----~~~~D 162 (321)
T 3lkz_A 128 GPG---------H-E-------EPQLV---------QSY--------G------WNIVTMKSGVDVFYRP-----SECCD 162 (321)
T ss_dssp STT---------S-C-------CCCCC---------CBT--------T------GGGEEEECSCCTTSSC-----CCCCS
T ss_pred CCC---------c-c-------Ccchh---------hhc--------C------CcceEEEeccCHhhCC-----CCCCC
Confidence 621 0 0 01000 000 0 012667777 765542 15689
Q ss_pred EEEEee-------ccCChhhHHHHHHHHHHhccCC-cEEEE
Q 015966 300 AVVTCF-------FIDTAHNIVEYIEIISRILKDG-GVWIN 332 (397)
Q Consensus 300 ~VvT~F-------FIDta~Ni~~yi~~I~~~LKPG-G~wIN 332 (397)
.|++=- .+|-+. -+..|+-+.+.|++| |-|+-
T Consensus 163 ~ivcDigeSs~~~~ve~~R-tl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 163 TLLCDIGESSSSAEVEEHR-TIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp EEEECCCCCCSCHHHHHHH-HHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEECccCCCChhhhhhH-HHHHHHHHHHHhccCCCcEEE
Confidence 887632 223222 234777778999998 88874
No 311
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.44 E-value=0.46 Score=45.25 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=32.3
Q ss_pred CeEEEecCCCChhHHHHHHcCCeEE-EEeCCHHHHHHHH
Q 015966 191 PACLVPGAGLGRLALEISHLGFISQ-GNEFSYYMMICSS 228 (397)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~Gf~V~-GnD~S~~ML~~s~ 228 (397)
.+||++=||.|.+..-|-+.||++. ++|+......+.+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~ 39 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYE 39 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHH
Confidence 4799999999999999999999864 9999998876544
No 312
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.41 E-value=0.095 Score=51.81 Aligned_cols=41 Identities=20% Similarity=0.065 Sum_probs=33.9
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..||+. |+ .|.++|.|..-+..++
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 255 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK 255 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4788999999865 8888999875 99 8999999998776554
No 313
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.31 E-value=0.095 Score=50.47 Aligned_cols=40 Identities=15% Similarity=-0.030 Sum_probs=33.2
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+|. |.++..+|+. |..|.+++.|..-+..+
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 216 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDA 216 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 3678999999985 8899999875 99999999988776543
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.25 E-value=0.096 Score=50.71 Aligned_cols=40 Identities=23% Similarity=0.219 Sum_probs=33.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+|. |.++..||+ +|. .|.++|.|..-+..++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 213 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK 213 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 678999999985 899999988 599 8999999987665443
No 315
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.18 E-value=0.12 Score=49.22 Aligned_cols=40 Identities=20% Similarity=0.160 Sum_probs=33.1
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+ |.|+.+..+++ +|+.|.+++.+...+..+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 36789999998 89999887766 699999999998876543
No 316
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.09 E-value=0.04 Score=52.67 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=33.2
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+ |.|.++..+|+ +|++|.+.+.|..-+..+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 36789999998 78999998876 599999999998766433
No 317
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.97 E-value=0.078 Score=50.53 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=55.2
Q ss_pred cceeEecccccccCCCCCCCCccEEEEe--eccCC------------------hhhHHHHHHHHHHhccCCcEEE-EecC
Q 015966 277 GFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT------------------AHNIVEYIEIISRILKDGGVWI-NLGP 335 (397)
Q Consensus 277 ~ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDt------------------a~Ni~~yi~~I~~~LKPGG~wI-N~GP 335 (397)
...+++||.+++... -.+++||+|||. |+... ...+.+.++.++++|||||.++ ++|.
T Consensus 21 ~~~i~~gD~~~~l~~-l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 21 VHRLHVGDAREVLAS-FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp CEEEEESCHHHHHTT-SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCEEEECcHHHHHhh-CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 367899999885321 125789999997 54221 0113356778999999999764 5554
Q ss_pred CcchhhhccCCCCCccccCC-HHHHHHHHHhCCCEEEEE
Q 015966 336 LLYHFADLYGQEDEMSIELS-LEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 336 LlYh~~d~~g~~~~~~ieLS-~EEl~~ll~~~GFeii~e 373 (397)
....... .+ ....++ .+++..++++.||.+..+
T Consensus 100 ~~~~~~~-~g----~~~~~~~~~~l~~~~~~~Gf~~~~~ 133 (297)
T 2zig_A 100 VAVARRR-FG----RHLVFPLHADIQVRCRKLGFDNLNP 133 (297)
T ss_dssp EEEECC---------EEEECHHHHHHHHHHHTTCEEEEE
T ss_pred Ccccccc-CC----cccccccHHHHHHHHHHcCCeeecc
Confidence 3211000 00 001122 367888999999988764
No 318
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.91 E-value=0.031 Score=53.77 Aligned_cols=41 Identities=20% Similarity=0.137 Sum_probs=33.6
Q ss_pred CCCCeEEEecCC--CChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAG--LGRLALEISH-LGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCG--lGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+| .|.++..+|+ +|..|.+.+.|..-+..++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 186 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL 186 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 467899999986 8999999987 5999999999887665443
No 319
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.90 E-value=0.083 Score=51.74 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=33.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..||+ +|..|.+++.|..-+..++
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~ 235 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK 235 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3678999999984 889999987 5999999999987765443
No 320
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.87 E-value=0.032 Score=53.46 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=33.6
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+ |.|.++..+|+. |..|.+++.+..-+..++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 190 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK 190 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 36789999994 789999888874 999999999987765443
No 321
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.84 E-value=1.2 Score=46.03 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=42.2
Q ss_pred HHHHHhhCCCCCC---CCCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHH
Q 015966 175 LEELDALFPNRSK---ESPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSS 228 (397)
Q Consensus 175 l~~L~~~~p~~~~---~~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~ 228 (397)
++.|...+|.... +...+||++=||.|.+..-|.+.||+ |.++|+......+.+
T Consensus 70 ~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~ 127 (482)
T 3me5_A 70 FAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYK 127 (482)
T ss_dssp HHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHH
T ss_pred HHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHH
Confidence 4667777765322 24689999999999999999999998 679999998765543
No 322
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.70 E-value=0.089 Score=51.36 Aligned_cols=41 Identities=17% Similarity=0.121 Sum_probs=34.1
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAG-LGRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+| .|.++..+|+. |+ .|.++|.|..-+..++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 367899999997 58999999876 98 7999999988776544
No 323
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.58 E-value=0.073 Score=51.39 Aligned_cols=40 Identities=20% Similarity=0.146 Sum_probs=33.3
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+|. |.++..+|+ +|+.|.+++.|..-+..++
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 678999999885 888889887 5999999999988775443
No 324
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.55 E-value=0.071 Score=51.26 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=34.1
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+ |+|.++..+|+ +|+.|.+.+.|..-+..++
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~ 208 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK 208 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 36789999998 79999888877 5999999999987765443
No 325
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=93.43 E-value=0.33 Score=46.54 Aligned_cols=97 Identities=12% Similarity=0.098 Sum_probs=60.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccC
Q 015966 188 ESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iP 265 (397)
+++.+|||+||+.|..+...|.+ |. .|.|+|+-..= + +. |
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~g---------h--------e~---------------------P 118 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPG---------H--------EE---------------------P 118 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTT---------S--------CC---------------------C
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCC---------c--------cC---------------------c
Confidence 36779999999999999866655 54 48888886511 0 01 1
Q ss_pred CCCCCCCCCC-CcceeEec-ccccccCCCCCCCCccEEEEee-------ccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 266 DIHPASAGIT-EGFSMCGG-DFVEVYSDPSQVGAWDAVVTCF-------FIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 266 Dv~p~~~~~~-~~ls~~~G-DF~ely~~~~~~~~fD~VvT~F-------FIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
.... .++ +.+.|..| |+..+. ...+|.|+|=. .+|-+. -++.|+-+.+.|++ |-|+-
T Consensus 119 ~~~~---s~gwn~v~fk~gvDv~~~~-----~~~~DtllcDIgeSs~~~~vE~~R-tlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 119 VPMS---TYGWNIVKLMSGKDVFYLP-----PEKCDTLLCDIGESSPSPTVEESR-TIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CCCC---CTTTTSEEEECSCCGGGCC-----CCCCSEEEECCCCCCSCHHHHHHH-HHHHHHHHGGGCSS-CEEEE
T ss_pred chhh---hcCcCceEEEeccceeecC-----CccccEEEEecCCCCCChhhhhhH-HHHHHHHHHHhccc-CCEEE
Confidence 1100 011 23888999 875442 26699998743 233222 23477777899999 66663
No 326
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.42 E-value=0.098 Score=50.05 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=33.0
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (397)
+++.+||+.|+ |.|.++..+|+ +|+.|.+.+.|..-+..
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~ 195 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 36789999997 79999888887 59999999999877653
No 327
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.34 E-value=0.06 Score=52.37 Aligned_cols=41 Identities=17% Similarity=0.073 Sum_probs=33.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..+|+. |+.|.+++.|..-+..++
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 230 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAF 230 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH
Confidence 4678999999885 8888888875 999999999987765443
No 328
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.21 E-value=0.044 Score=53.86 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=34.1
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..||+. |. .|.++|.|..-+..++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK 227 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH
Confidence 3678999999976 9999999984 98 6999999998776554
No 329
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.20 E-value=0.37 Score=47.20 Aligned_cols=40 Identities=10% Similarity=-0.049 Sum_probs=34.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eE--EEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLGF--IS--QGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V--~GnD~S~~ML~~s~ 228 (397)
.+.+||++-||.|.+..-+.+.|+ ++ .++|+......+.+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~ 52 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYS 52 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHH
Confidence 567999999999999999999996 54 59999998876544
No 330
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.18 E-value=0.043 Score=52.43 Aligned_cols=41 Identities=20% Similarity=0.130 Sum_probs=33.7
Q ss_pred CCCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPG--AGLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.| .|.|.++..+|+. |++|.+.+.|..-+..++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 182 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3678999998 4789999998874 999999999987765443
No 331
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.13 E-value=0.098 Score=50.43 Aligned_cols=41 Identities=22% Similarity=0.161 Sum_probs=33.7
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+ |.|.++..+|+. |+.|.+++-+..-+..++
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 201 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK 201 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 46789999997 789999999875 999999999887665443
No 332
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.12 E-value=0.22 Score=47.11 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=32.2
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~~-Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+| .|.++..||+. |++|.+++ |..-+..+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~ 181 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALA 181 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence 478899999997 59999999875 99999999 87665443
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.04 E-value=0.3 Score=47.41 Aligned_cols=41 Identities=20% Similarity=0.046 Sum_probs=33.2
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..||+. |. .|.++|.|..-+..++
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 233 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI 233 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 3678999999874 8889999875 98 7999999987765443
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.82 E-value=0.31 Score=47.34 Aligned_cols=41 Identities=22% Similarity=0.173 Sum_probs=33.1
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..+|+. |. .|.+++.|..-+..++
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 234 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 234 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 3678999999874 8888898874 98 7999999987765443
No 335
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.76 E-value=0.065 Score=51.66 Aligned_cols=40 Identities=23% Similarity=0.219 Sum_probs=33.1
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+ |.|+.+..+|+ +|+.|.+.+.|...+..+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~ 210 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF 210 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH
Confidence 36789999998 78999888877 699999999988776443
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.65 E-value=0.089 Score=50.58 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=32.2
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 189 SPPACLVPGAG-LGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
++.+||+.|+| .|.++..+|+ +|+.|.+.+.|..-+..+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 204 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA 204 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 67799999986 6888888876 599999999998776544
No 337
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.64 E-value=0.21 Score=48.45 Aligned_cols=41 Identities=20% Similarity=0.191 Sum_probs=33.2
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..+|+. |. .|.+++.|..-+..++
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~ 232 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 3678999999875 8888898875 98 7999999987765443
No 338
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.64 E-value=0.15 Score=48.41 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=30.9
Q ss_pred eEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 192 ACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 192 rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+||+.|+ |+|.++..+|+. |.+|.+++-|..-+..++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~ 188 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK 188 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4999997 789999999875 999999999887665443
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.58 E-value=0.073 Score=51.31 Aligned_cols=40 Identities=28% Similarity=0.306 Sum_probs=32.3
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAG-LGRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+| .|.++..+|+ +|+ .|.+.+.|..-+..++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~ 209 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK 209 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 56799999987 4888888887 599 9999999987665443
No 340
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.53 E-value=0.4 Score=46.55 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+|. |.++..+|+ +|. .|.+++.|..-+..++
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 3678999999875 888888887 498 7999999987765443
No 341
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.51 E-value=0.13 Score=49.99 Aligned_cols=40 Identities=25% Similarity=0.243 Sum_probs=32.7
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+ |.|..+..+|+ +|+.|.+.+.|..-+..+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 211 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV 211 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Confidence 36789999997 78999888876 599999999998766533
No 342
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.39 E-value=0.11 Score=49.63 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=32.3
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+ |.|..+..+++ +|+.|.+.+.+..-+..+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~ 186 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA 186 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 36789999995 88998887766 599999999998766543
No 343
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.36 E-value=0.089 Score=50.60 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=32.4
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc---CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISHL---GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~---Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+|. |.++..+|+. |+.|.+++.|..-+..++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~ 213 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL 213 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH
Confidence 467999999874 8888888874 999999999987765443
No 344
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.23 E-value=0.052 Score=51.18 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=32.2
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (397)
+++.+||+.|+ |.|.++..+|+ +|..|.+.+-+..-+..
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 165 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 165 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 36789999998 78999988886 59999999998766543
No 345
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.05 E-value=0.12 Score=50.22 Aligned_cols=39 Identities=21% Similarity=0.150 Sum_probs=32.5
Q ss_pred CCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 189 SPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 189 ~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
++.+||+.| .|.|.++..+|+ +|+.|.+.+-+..-+..+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 204 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL 204 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 678999999 578999999887 499999999998766543
No 346
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.03 E-value=0.43 Score=46.32 Aligned_cols=41 Identities=17% Similarity=0.140 Sum_probs=33.1
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAG-LGRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+| .|.++..||+. |. .|.++|.|..-+..++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 237 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK 237 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 367899999987 48889999875 98 7999999987765443
No 347
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.01 E-value=0.12 Score=50.20 Aligned_cols=41 Identities=17% Similarity=0.046 Sum_probs=32.8
Q ss_pred CCCCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAG-LGRLALEISH-LGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+| .|.++..+|+ +|+.|.+++.|..-+..++
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~ 220 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM 220 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 367899999986 4888888887 5999999999887665443
No 348
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.00 E-value=0.12 Score=49.14 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=32.6
Q ss_pred CCCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.| .|.|..+..+|+ +|+.|.+.+.+..-+..+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~ 181 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA 181 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3678999999 588998888776 599999999998776544
No 349
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.86 E-value=0.17 Score=48.98 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=32.5
Q ss_pred CCCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.| .|.|..+..+|+ +|+.|.+.+.|..-+..+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 203 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA 203 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 4678999998 478998887766 599999999998776544
No 350
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.79 E-value=0.2 Score=48.52 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=33.3
Q ss_pred CCCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPG--AGLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.| .|.|.++..+|+. |+.|.+.+.|..-+..++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 209 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE 209 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4778999995 4689999888875 999999999998775444
No 351
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=91.53 E-value=0.071 Score=52.29 Aligned_cols=41 Identities=20% Similarity=0.104 Sum_probs=33.0
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-C-CeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAG-LGRLALEISHL-G-FISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+| +|.++..||+. | ..|.+.+.|..-+..++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence 367899999976 58888888875 8 69999999987765443
No 352
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.39 E-value=0.4 Score=46.36 Aligned_cols=51 Identities=12% Similarity=-0.063 Sum_probs=42.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHH
Q 015966 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228 (397)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.|.+.+. .++..||||=||.|..+....++|-...|+|++..+..++.
T Consensus 241 l~~~~i~~~~----~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 241 LPEFFIRMLT----EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASA 291 (323)
T ss_dssp HHHHHHHHHC----CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHH
Confidence 5555555443 25779999999999999999999999999999999988776
No 353
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.30 E-value=0.23 Score=49.94 Aligned_cols=41 Identities=22% Similarity=0.093 Sum_probs=33.6
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+ |+|.++..+|+. |+.|.+++-|..=+..++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~ 270 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR 270 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 46789999997 689999999885 999999998887665443
No 354
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.25 E-value=0.061 Score=51.77 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=29.8
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCC-eEEEEeCCHHHH
Q 015966 189 SPPACLVPGAG-LGRLALEISH-LGF-ISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~-~Gf-~V~GnD~S~~ML 224 (397)
++.+||+.|+| .|.++..+|+ +|. .|.+.+.|..-+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~ 202 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL 202 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 56789999986 4888888887 599 899999998655
No 355
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=91.15 E-value=0.4 Score=47.68 Aligned_cols=37 Identities=11% Similarity=-0.182 Sum_probs=32.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~ 225 (397)
++..||++|.|+|-|+..|+++ +-.|+++|+...++.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~ 96 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYK 96 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHH
Confidence 3578999999999999999987 568999999998764
No 356
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.12 E-value=0.3 Score=48.66 Aligned_cols=41 Identities=24% Similarity=0.182 Sum_probs=33.5
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+ |.|.++..+|+. |..|.+.+-|..-+..++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~ 262 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR 262 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 46789999997 689999998875 999999998887765443
No 357
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=90.91 E-value=1.1 Score=43.78 Aligned_cols=39 Identities=10% Similarity=0.044 Sum_probs=32.9
Q ss_pred CCeEEEecCCCChhHHHHHHcCC--e-EEEEeCCHHHHHHHH
Q 015966 190 PPACLVPGAGLGRLALEISHLGF--I-SQGNEFSYYMMICSS 228 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf--~-V~GnD~S~~ML~~s~ 228 (397)
+.+||++=||.|.+..-+.+.|+ + |.++|+......+.+
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~ 44 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYK 44 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHH
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHH
Confidence 35899999999999999999997 4 679999998876544
No 358
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.84 E-value=0.13 Score=49.47 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=33.9
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc--CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISHL--GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~--Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+|. |.++..||+. |..|.++|.|..-+..++
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~ 213 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAR 213 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 678999999976 8999999975 789999999998776544
No 359
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.81 E-value=1.1 Score=38.70 Aligned_cols=37 Identities=27% Similarity=0.219 Sum_probs=27.0
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHc-CCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GR-LALEISHL-GFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GR-La~eLA~~-Gf~V~GnD~S~~ML~ 225 (397)
.+.+|++.|+|. |+ ++..|.+. |+.|.++|.+..-+.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~ 77 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQ 77 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHH
Confidence 356899998763 32 24556677 999999999987653
No 360
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.74 E-value=0.15 Score=49.28 Aligned_cols=37 Identities=30% Similarity=0.265 Sum_probs=30.8
Q ss_pred CC--CeEEEecC--CCChhHHHHHH-cCC-eEEEEeCCHHHHH
Q 015966 189 SP--PACLVPGA--GLGRLALEISH-LGF-ISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~--~rVLvPGC--GlGRLa~eLA~-~Gf-~V~GnD~S~~ML~ 225 (397)
++ .+||+.|+ |.|.++..+|+ +|+ .|.+.+.+..-+.
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~ 200 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 200 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHH
Confidence 56 89999997 88999888876 599 9999999976654
No 361
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.54 E-value=0.32 Score=46.84 Aligned_cols=39 Identities=18% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICS 227 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s 227 (397)
+++.+||+.|+ |.|.++..+|+. |+.|.+. .|..-+..+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~ 190 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV 190 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH
Confidence 46789999994 689999999875 9999999 787665443
No 362
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.48 E-value=1.2 Score=38.99 Aligned_cols=33 Identities=18% Similarity=-0.015 Sum_probs=24.5
Q ss_pred eEEEecC--CCChh-HHHHHHcCCeEEEEeCCHHHH
Q 015966 192 ACLVPGA--GLGRL-ALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 192 rVLvPGC--GlGRL-a~eLA~~Gf~V~GnD~S~~ML 224 (397)
+||+.|+ |+|+. +..|+++|++|.+++-+..-+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA 37 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 6999996 34443 566677899999999887543
No 363
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.24 E-value=0.19 Score=47.85 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=29.2
Q ss_pred eEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHH
Q 015966 192 ACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMIC 226 (397)
Q Consensus 192 rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~ 226 (397)
+||+.|+ |.|.++..+|+. |+.|.+.+-|..-+..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~ 189 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY 189 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 7999997 889999999874 9999999988655543
No 364
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.78 E-value=1.1 Score=39.95 Aligned_cols=36 Identities=22% Similarity=0.088 Sum_probs=26.9
Q ss_pred CCCeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGA--GLGR-LALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~~ML 224 (397)
++.+||+.|+ |+|+ ++..|+++|++|.+++-+..-+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~ 58 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG 58 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH
Confidence 5679999997 4454 4667778899999999886543
No 365
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.55 E-value=1 Score=47.59 Aligned_cols=74 Identities=23% Similarity=0.307 Sum_probs=51.2
Q ss_pred cceeEecccccccCC-C-CCCCCccEEEEeeccCCh---hh----HHHHHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 277 GFSMCGGDFVEVYSD-P-SQVGAWDAVVTCFFIDTA---HN----IVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 277 ~ls~~~GDF~ely~~-~-~~~~~fD~VvT~FFIDta---~N----i~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
.+.++.||..+.... + ...+.+|++ |+|-. .| -.++|..+.+++||||.+..++
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~----flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------------- 211 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAW----FLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------------- 211 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEE----EECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------------
T ss_pred EEEEEccCHHHHHhhcccccCCceeEE----EECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------------
Confidence 388999999876431 0 013567776 66632 12 1588999999999999988421
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEe
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEKEK 374 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~e~ 374 (397)
....+++.+.++||.+.+..
T Consensus 212 -------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 -------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -------CCHHHHHHHHHTTCEEEEEE
T ss_pred -------CcHHHHHHHHhCCeEEEecc
Confidence 12578899999999988743
No 366
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=88.87 E-value=0.39 Score=46.35 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=27.2
Q ss_pred CeEEEecCC-CChhH-HHHH-H-cCCe-EEEEeCCHH
Q 015966 191 PACLVPGAG-LGRLA-LEIS-H-LGFI-SQGNEFSYY 222 (397)
Q Consensus 191 ~rVLvPGCG-lGRLa-~eLA-~-~Gf~-V~GnD~S~~ 222 (397)
.+||+.|+| .|.++ ..+| + +|+. |.+++-+..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcc
Confidence 799999976 48888 9999 5 5997 999999875
No 367
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.86 E-value=0.28 Score=46.66 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=28.9
Q ss_pred eEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHH
Q 015966 192 ACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMIC 226 (397)
Q Consensus 192 rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~ 226 (397)
+||+.|+ |.|.++..+|+. |+.|.+.+-|..-+..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~ 190 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY 190 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 7999997 789999998875 9999999988655443
No 368
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.68 E-value=0.34 Score=47.21 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=30.3
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMIC 226 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~ 226 (397)
+++.+||+.|+ |+|.++..||+. |+.|.+.- |..=+..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~ 203 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL 203 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH
Confidence 46789999998 499999999885 99998884 7655543
No 369
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.42 E-value=1.4 Score=40.15 Aligned_cols=36 Identities=11% Similarity=-0.017 Sum_probs=28.9
Q ss_pred CCCeEEEecCC----CCh-hHHHHHHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAG----LGR-LALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCG----lGR-La~eLA~~Gf~V~GnD~S~~ML 224 (397)
++.+||+-|++ .|+ ++..|+++|+.|..++-+....
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~ 46 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE 46 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH
Confidence 46789999965 676 6899999999999998876443
No 370
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=88.22 E-value=0.67 Score=44.92 Aligned_cols=109 Identities=11% Similarity=-0.038 Sum_probs=71.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCcccccccccccc
Q 015966 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (397)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~S 250 (397)
..|+++.|... ++..+||.=+|+|.++.|+.+.|-.++.+|.+..-+.+-+ +.
T Consensus 80 l~~yf~~l~~~-------n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~---~N----------------- 132 (283)
T 2oo3_A 80 FLEYISVIKQI-------NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLL---KL----------------- 132 (283)
T ss_dssp GHHHHHHHHHH-------SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHT---TS-----------------
T ss_pred HHHHHHHHHHh-------cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHH---HH-----------------
Confidence 45788888773 2346899999999999999998878999999997764222 00
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcceeEeccccc-ccCCCCCCCCccEEEEeeccCCh----hhHHHHHHHHHH--h
Q 015966 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVE-VYSDPSQVGAWDAVVTCFFIDTA----HNIVEYIEIISR--I 323 (397)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~e-ly~~~~~~~~fD~VvT~FFIDta----~Ni~~yi~~I~~--~ 323 (397)
... ..++.++.+|... +........+||+| |||.. ....+.++.|.+ .
T Consensus 133 -l~~--------------------~~~~~V~~~D~~~~L~~l~~~~~~fdLV----fiDPPYe~k~~~~~vl~~L~~~~~ 187 (283)
T 2oo3_A 133 -PHF--------------------NKKVYVNHTDGVSKLNALLPPPEKRGLI----FIDPSYERKEEYKEIPYAIKNAYS 187 (283)
T ss_dssp -CCT--------------------TSCEEEECSCHHHHHHHHCSCTTSCEEE----EECCCCCSTTHHHHHHHHHHHHHH
T ss_pred -hCc--------------------CCcEEEEeCcHHHHHHHhcCCCCCccEE----EECCCCCCCcHHHHHHHHHHHhCc
Confidence 000 1225667778543 21100123569988 67763 245556666665 4
Q ss_pred ccCCcEEE
Q 015966 324 LKDGGVWI 331 (397)
Q Consensus 324 LKPGG~wI 331 (397)
+.|+|+.+
T Consensus 188 r~~~Gi~v 195 (283)
T 2oo3_A 188 KFSTGLYC 195 (283)
T ss_dssp HCTTSEEE
T ss_pred cCCCeEEE
Confidence 56899999
No 371
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=88.03 E-value=1.4 Score=38.80 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=21.2
Q ss_pred eEEEecCCCChhHH----HHHHcCCeEEEEeCCH
Q 015966 192 ACLVPGAGLGRLAL----EISHLGFISQGNEFSY 221 (397)
Q Consensus 192 rVLvPGCGlGRLa~----eLA~~Gf~V~GnD~S~ 221 (397)
+||+.|+ +|.++. .|+++|++|.+++-+.
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 7999994 455544 4556699999988775
No 372
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.86 E-value=2.4 Score=41.74 Aligned_cols=115 Identities=10% Similarity=0.042 Sum_probs=70.3
Q ss_pred CCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 190 PPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 190 ~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
..+|.++|+|. | .++..|++.|+.|.+.|.+..-+.... .. .+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~---~~---------------------------g~~---- 67 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALE---RE---------------------------GIA---- 67 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH---TT---------------------------TCB----
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH---HC---------------------------CCE----
Confidence 46899998773 3 347778888999999999987643211 00 000
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
...+..++.. .....|+|++|---+ .+.+.++.+...|+||-++|+.+-..+
T Consensus 68 -------------~~~s~~e~~~---~a~~~DvVi~~vp~~---~v~~vl~~l~~~l~~g~iiId~st~~~--------- 119 (358)
T 4e21_A 68 -------------GARSIEEFCA---KLVKPRVVWLMVPAA---VVDSMLQRMTPLLAANDIVIDGGNSHY--------- 119 (358)
T ss_dssp -------------CCSSHHHHHH---HSCSSCEEEECSCGG---GHHHHHHHHGGGCCTTCEEEECSSCCH---------
T ss_pred -------------EeCCHHHHHh---cCCCCCEEEEeCCHH---HHHHHHHHHHhhCCCCCEEEeCCCCCh---------
Confidence 0112223221 113459998765333 467788899999999999998654322
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
-+..++.+.+.+.|..++.
T Consensus 120 ------~~~~~~~~~l~~~g~~~vd 138 (358)
T 4e21_A 120 ------QDDIRRADQMRAQGITYVD 138 (358)
T ss_dssp ------HHHHHHHHHHHTTTCEEEE
T ss_pred ------HHHHHHHHHHHHCCCEEEe
Confidence 1223445556666776654
No 373
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.72 E-value=1.2 Score=45.73 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=30.5
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHH
Q 015966 189 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSYY 222 (397)
Q Consensus 189 ~~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ 222 (397)
+-.+|-++|+|+ +.+|.-||+.|+.|+..|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 446899999997 6789999999999999999997
No 374
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.65 E-value=1.4 Score=42.40 Aligned_cols=88 Identities=19% Similarity=0.320 Sum_probs=54.5
Q ss_pred ceeEecccccccCCCCCCCCccEEEEe--eccCC------------hhhHHHHHHHHHHhccCCcEEE-EecCCcchhhh
Q 015966 278 FSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT------------AHNIVEYIEIISRILKDGGVWI-NLGPLLYHFAD 342 (397)
Q Consensus 278 ls~~~GDF~ely~~~~~~~~fD~VvT~--FFIDt------------a~Ni~~yi~~I~~~LKPGG~wI-N~GPLlYh~~d 342 (397)
..++.||.+++... -.+++||+|+|- |.... ...+.+.++.++++|||||.++ .++.. | ..
T Consensus 15 ~~ii~gD~~~~l~~-l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~-~--~~ 90 (323)
T 1boo_A 15 GSMYIGDSLELLES-FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA-Y--MK 90 (323)
T ss_dssp EEEEESCHHHHGGG-SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC-E--ET
T ss_pred ceEEeCcHHHHHhh-CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE-e--cC
Confidence 67889998774321 125789999987 54431 1236678889999999999765 34432 1 00
Q ss_pred ccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 343 LYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 343 ~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
+ .+ ....+.+..+..+++..||.+..+
T Consensus 91 --g-~~-~~~~~~~~~i~~~~~~~Gf~~~~~ 117 (323)
T 1boo_A 91 --G-VP-ARSIYNFRVLIRMIDEVGFFLAED 117 (323)
T ss_dssp --T-EE-EECCHHHHHHHHHHHTTCCEEEEE
T ss_pred --C-Cc-ccccchHHHHHHHHHhCCCEEEEE
Confidence 0 00 000124556777888999988753
No 375
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=87.60 E-value=0.78 Score=44.59 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=32.7
Q ss_pred CCCeEEEec--CCCChhHHHHHHc--CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPG--AGLGRLALEISHL--GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPG--CGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.| .|.|.++..+|+. |..|.+++-+..-+..++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~ 214 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK 214 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH
Confidence 567999998 4679999999985 899999999987665443
No 376
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=87.27 E-value=0.7 Score=44.91 Aligned_cols=37 Identities=16% Similarity=0.011 Sum_probs=29.5
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISHL-GFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf~V~GnD~S~~ML~ 225 (397)
++.+||+.|+|. |.++..+|+. |+.|.+.+-|..-+.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 225 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKE 225 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 567999999863 7778888764 999999998876553
No 377
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=87.25 E-value=0.96 Score=43.75 Aligned_cols=32 Identities=22% Similarity=0.146 Sum_probs=26.8
Q ss_pred CCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCH
Q 015966 190 PPACLVPGAG-LGRLALEISH-LGFISQGNEFSY 221 (397)
Q Consensus 190 ~~rVLvPGCG-lGRLa~eLA~-~Gf~V~GnD~S~ 221 (397)
+.+||+.|+| .|.++..+|+ +|+.|.+++.+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 6799999985 4777778776 599999999986
No 378
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.23 E-value=0.98 Score=43.84 Aligned_cols=52 Identities=17% Similarity=-0.019 Sum_probs=42.4
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCH---HHHHHHH
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSY---YMMICSS 228 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~---~ML~~s~ 228 (397)
.+++.|.+.+. .++..||||=||.|..+....++|....|+|++. .+...+.
T Consensus 230 ~l~~~~i~~~~----~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 230 AVIERLVRALS----HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp HHHHHHHHHHS----CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHH
Confidence 35566655543 2577999999999999999999999999999999 7776655
No 379
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.85 E-value=3.8 Score=39.34 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=29.6
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCC--eEEEEeCCHHHHH
Q 015966 190 PPACLVPGAGL--GRLALEISHLGF--ISQGNEFSYYMMI 225 (397)
Q Consensus 190 ~~rVLvPGCGl--GRLa~eLA~~Gf--~V~GnD~S~~ML~ 225 (397)
..+|.++|+|. |.++..|++.|+ +|.+.|-+..-+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~ 72 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESIS 72 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHH
Confidence 36899999885 456788888999 9999999987654
No 380
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.57 E-value=2 Score=40.47 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=28.3
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 190 PPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 190 ~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
..+|.++|+|. +.++..|++.|++|++.|.+..-+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~ 44 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACA 44 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence 46899998874 3357778888999999999987653
No 381
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.52 E-value=2.9 Score=39.89 Aligned_cols=36 Identities=17% Similarity=0.097 Sum_probs=29.0
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML 224 (397)
...+|.++|+|. |+ ++..|++.|++|++.|.+..-+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 67 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARA 67 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence 456899999984 44 5778888999999999998654
No 382
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.41 E-value=0.4 Score=40.42 Aligned_cols=29 Identities=21% Similarity=0.239 Sum_probs=26.2
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015966 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (397)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (397)
.|+++|+|...| |..|+++|++|+-+|-+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 499999999998 78899999999999954
No 383
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=86.34 E-value=0.46 Score=46.20 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=28.7
Q ss_pred CCCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCHHHH
Q 015966 188 ESPPACLVPG--AGLGRLALEISHL-GFISQGNEFSYYMM 224 (397)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~~-Gf~V~GnD~S~~ML 224 (397)
+++.+||+.| .|.|.++..+|+. |..|.+.+ |..-+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~ 220 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS 220 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH
Confidence 4678999999 4689999998875 99999988 65443
No 384
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.64 E-value=0.53 Score=46.54 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=25.9
Q ss_pred CCCeEEEecCCC-ChhHHHH-HHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEI-SHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eL-A~~Gf~V~GnD~S~~ML~ 225 (397)
++.+|++.|+|. |+.+..+ ...|.+|.+.|.+..-+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~ 205 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLR 205 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 567999999842 3333333 335999999999987654
No 385
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=85.59 E-value=3.2 Score=38.78 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=30.1
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHH
Q 015966 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICS 227 (397)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s 227 (397)
.+|.++|+|+ +.+|..+++.|++|+..|.+..-+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 43 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAA 43 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 5899999886 345777888999999999999877543
No 386
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=85.56 E-value=9.2 Score=35.25 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=25.9
Q ss_pred CCCeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHH
Q 015966 189 SPPACLVPGA--GLGR-LALEISHLGFISQGNEFSYYM 223 (397)
Q Consensus 189 ~~~rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~~M 223 (397)
++.+||+-|+ ++|+ ++..|+++|++|.+++-+..-
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 47 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASK 47 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 5679999997 3343 355667789999999988653
No 387
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.53 E-value=0.52 Score=47.42 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=27.8
Q ss_pred CCCeEEEecCCC-ChhHHHHH-HcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEIS-HLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA-~~Gf~V~GnD~S~~ML~ 225 (397)
++.+|+++|+|. |+.+..++ ..|.+|++.|.+..-+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~ 221 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAE 221 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 567999999983 55555444 45999999999987554
No 388
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.26 E-value=0.71 Score=43.92 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=30.8
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CCe-EEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAG-LGRLALEISHL-GFI-SQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~~-Gf~-V~GnD~S~~ML~~s~ 228 (397)
.++.+||+.|+| .|.++..+|++ |+. +.++|.|..=+..++
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~ 202 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAK 202 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHH
Confidence 367899999987 46677777765 876 579999987765444
No 389
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.98 E-value=0.81 Score=44.92 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=26.0
Q ss_pred CCCeEEEecCC-CChhHH-HHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAG-LGRLAL-EISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~-eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+|++.|+| .|+.+. .++..|++|.+.|.+..-+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~ 203 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQ 203 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 45799999984 233332 33456999999999987653
No 390
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.63 E-value=6.5 Score=39.83 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=32.4
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHH
Q 015966 189 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICS 227 (397)
Q Consensus 189 ~~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s 227 (397)
+-.+|.++|+|+ +.+|.-|++.|+.|++.|.+..-+..+
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~ 76 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAA 76 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 345899999997 457889999999999999999876543
No 391
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=84.52 E-value=0.65 Score=45.89 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=27.5
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~ 225 (397)
++.+|+++|+|. |+.+..+++ .|..|++.|.+..-+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~ 209 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKE 209 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 577999999873 555555554 5999999999875543
No 392
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.33 E-value=3.4 Score=35.76 Aligned_cols=32 Identities=16% Similarity=-0.027 Sum_probs=24.3
Q ss_pred eEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHH
Q 015966 192 ACLVPGA--GLGR-LALEISHLGFISQGNEFSYYM 223 (397)
Q Consensus 192 rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~~M 223 (397)
+||+.|+ |+|+ ++..|+++|++|.+++-+..-
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 36 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK 36 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh
Confidence 7999996 3455 466677889999999887644
No 393
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=84.17 E-value=0.45 Score=47.27 Aligned_cols=31 Identities=29% Similarity=0.276 Sum_probs=27.0
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 015966 191 PACLVPGAGLGRL--ALEISHLGFISQGNEFSY 221 (397)
Q Consensus 191 ~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S~ 221 (397)
++|+|+|+|.+.| |..||++|++|+-+|-+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 4799999999999 788999999999988543
No 394
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=84.06 E-value=2.8 Score=43.46 Aligned_cols=37 Identities=19% Similarity=0.100 Sum_probs=25.8
Q ss_pred CCCeEEEecCCC-ChhHHHHH-HcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEIS-HLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA-~~Gf~V~GnD~S~~ML~ 225 (397)
.+.+|++.|+|. |+.+..++ ..|+.|.+.|.+..-+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~ 311 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINAL 311 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 678999999752 33333332 34999999999987654
No 395
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=84.02 E-value=0.91 Score=43.01 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=28.6
Q ss_pred CCCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCHHHHH
Q 015966 188 ESPPACLVPG--AGLGRLALEISHL-GFISQGNEFSYYMMI 225 (397)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~~-Gf~V~GnD~S~~ML~ 225 (397)
+++.+||+.| .|.|.++..+|+. |..|.+.. |..-+.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~ 190 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHA 190 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHH
Confidence 3678999996 4579999999875 99999987 443343
No 396
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=83.90 E-value=1.5 Score=42.96 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=22.7
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~----~Gf~V~GnD~S~ 221 (397)
.+.+|.++|. |+++..+|+ .|++|.+.|-+.
T Consensus 164 ~g~tvgIIGl--G~IG~~vA~~l~~~G~~V~~~d~~~ 198 (335)
T 2g76_A 164 NGKTLGILGL--GRIGREVATRMQSFGMKTIGYDPII 198 (335)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CcCEEEEEeE--CHHHHHHHHHHHHCCCEEEEECCCc
Confidence 5678999965 666665554 489999998764
No 397
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=83.78 E-value=0.92 Score=43.53 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=31.6
Q ss_pred CCCeEEEec-C-CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPG-A-GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPG-C-GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.| + |.|.++..+|+. |+.|.+++-+..-+..++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 192 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK 192 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 577999994 4 568899888875 999999999887665443
No 398
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.72 E-value=8.6 Score=34.77 Aligned_cols=30 Identities=20% Similarity=0.099 Sum_probs=22.9
Q ss_pred CeEEEecCCCChhHHHH----HHcCCeEEEEeCCHH
Q 015966 191 PACLVPGAGLGRLALEI----SHLGFISQGNEFSYY 222 (397)
Q Consensus 191 ~rVLvPGCGlGRLa~eL----A~~Gf~V~GnD~S~~ 222 (397)
.+||+.|+ |.++..| .++|++|.+.+-+..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 58999995 7665554 456999999987764
No 399
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.65 E-value=2.4 Score=39.97 Aligned_cols=35 Identities=14% Similarity=-0.027 Sum_probs=27.8
Q ss_pred CCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 015966 190 PPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 190 ~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
..+|.++|+|. | .++..|++.|++|++.|.+..-+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 51 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAM 51 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 35899999885 3 36778888899999999987543
No 400
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=83.38 E-value=0.82 Score=46.33 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=28.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMIC 226 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (397)
++.+|+++|+|. |..+..+++ .|.+|++.|.+..-+..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~ 228 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQ 228 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 568999999983 555544443 59999999999876543
No 401
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=82.84 E-value=1.2 Score=43.08 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeCCHH
Q 015966 189 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSYY 222 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~----~Gf~V~GnD~S~~ 222 (397)
.+.+|.++| +|+++..+|+ .|++|.+.|-+..
T Consensus 141 ~g~~vgIIG--~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (313)
T 2ekl_A 141 AGKTIGIVG--FGRIGTKVGIIANAMGMKVLAYDILDI 176 (313)
T ss_dssp TTCEEEEES--CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEe--eCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 567899986 5666666654 4999999998764
No 402
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=82.59 E-value=0.74 Score=46.08 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=28.1
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~ 225 (397)
++.+|++.|+|. |+.+..+|+ .|..|++.|.+..-+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~ 209 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKE 209 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 467999999873 555555554 5999999999987654
No 403
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=82.41 E-value=0.29 Score=53.27 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=29.1
Q ss_pred CCCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCH
Q 015966 187 KESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSY 221 (397)
Q Consensus 187 ~~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~ 221 (397)
.+++.+||+.|+ |.|.++..||+. |.+|.+.+-+.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~ 380 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED 380 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence 347889999994 799999999986 99999887543
No 404
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=82.11 E-value=0.69 Score=56.50 Aligned_cols=75 Identities=13% Similarity=0.100 Sum_probs=26.6
Q ss_pred CCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecC--------CcchhhhccCCCCCccccCCHHHHHHHHHhC
Q 015966 295 VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGP--------LLYHFADLYGQEDEMSIELSLEDVKRVALHY 366 (397)
Q Consensus 295 ~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GP--------LlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~ 366 (397)
...||+|+...-+....++.+.++.+.++|||||.+|-..+ +.-.+... + .+ ..-.++.++..+++...
T Consensus 1309 ~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~-~-r~-~~~~~~~~~w~~~l~~~ 1385 (2512)
T 2vz8_A 1309 LGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSP-E-QG-GRHLLSQDQWESLFAGA 1385 (2512)
T ss_dssp ---CCEEEEECC--------------------CCEEEEEEC-----------------------------CTTTTSSTTT
T ss_pred CCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccccccccccccc-c-cc-CCcccCHHHHHHHHHhC
Confidence 35699999888888778899999999999999999875321 10001110 0 00 01136667777778889
Q ss_pred CCEEEE
Q 015966 367 GFEFEK 372 (397)
Q Consensus 367 GFeii~ 372 (397)
||..+.
T Consensus 1386 gf~~~~ 1391 (2512)
T 2vz8_A 1386 SLHLVA 1391 (2512)
T ss_dssp TEEEEE
T ss_pred CCceee
Confidence 998765
No 405
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.85 E-value=9.6 Score=34.87 Aligned_cols=34 Identities=24% Similarity=0.132 Sum_probs=27.0
Q ss_pred eEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 192 ACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 192 rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
+|.++|+|. +.++..|++.|++|.+.|.+..-+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~ 37 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCE 37 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 689999875 3456777888999999999986653
No 406
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.85 E-value=6.4 Score=38.53 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=60.7
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 190 PPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 190 ~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
..+|.++|+|. +.+|.-|++.|++|+..+.+..-+...+ . . ... ...+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~---~-~---~~~--------------------~~~l~g~ 81 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQ---A-E---GVN--------------------NRYLPNY 81 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHH---H-H---SSB--------------------TTTBTTC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH---H-c---CCC--------------------cccCCCC
Confidence 46899999996 4578889999999999999976543221 1 0 000 0112222
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEE
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN 332 (397)
. ...++... .|..+.. ...|+|+.+- ....+.+.++.|...|+|+-++|+
T Consensus 82 ~-----l~~~i~~t-~d~~ea~------~~aDvVilaV---p~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 82 P-----FPETLKAY-CDLKASL------EGVTDILIVV---PSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp C-----CCTTEEEE-SCHHHHH------TTCCEEEECC---CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred c-----cCCCeEEE-CCHHHHH------hcCCEEEECC---CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 01122222 2433321 3458887542 234577888888889999888886
No 407
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.65 E-value=22 Score=31.66 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++.| .++..|+++|++|...+.+..-+.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~ 47 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAE 47 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 4678999997654 357888888999999999887654
No 408
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.32 E-value=5.2 Score=36.42 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=20.7
Q ss_pred CCeEEEecCCCChhHHHH----HHcCCeEEEEeCC
Q 015966 190 PPACLVPGAGLGRLALEI----SHLGFISQGNEFS 220 (397)
Q Consensus 190 ~~rVLvPGCGlGRLa~eL----A~~Gf~V~GnD~S 220 (397)
..+||+.|+ |.++..| +++|++|.+++-+
T Consensus 3 ~~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGC--GDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEECC--SHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358999994 6665554 4569999888654
No 409
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.07 E-value=11 Score=34.47 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=28.2
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++.| .++..|+++|+.|.+.+-+..-+.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~ 50 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGH 50 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4668999997644 357778888999999999876553
No 410
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=80.75 E-value=11 Score=34.60 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=26.7
Q ss_pred eEEEecCCC--ChhHHHHHHcCC--eEEEEeCCHHHHH
Q 015966 192 ACLVPGAGL--GRLALEISHLGF--ISQGNEFSYYMMI 225 (397)
Q Consensus 192 rVLvPGCGl--GRLa~eLA~~Gf--~V~GnD~S~~ML~ 225 (397)
+|.++|+|. +.++.-|++.|+ +|.+.|-+..-+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~ 40 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESIS 40 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHH
Confidence 799999875 345677778899 9999999987653
No 411
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=80.72 E-value=3.7 Score=38.95 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=30.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-c-CCeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEISH-L-GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~-Gf~V~GnD~S~~ML~~s~ 228 (397)
++.+||+.|+|. |.++..+|+ + |..|.++|.|..=+..++
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~ 205 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK 205 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh
Confidence 678999999986 456666665 3 789999999987665443
No 412
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=80.18 E-value=1.9 Score=41.44 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeCCHH
Q 015966 189 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSYY 222 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~----~Gf~V~GnD~S~~ 222 (397)
.+.+|.++| +|+++..+|+ .|++|.+.|-+..
T Consensus 141 ~g~~vgIiG--~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (307)
T 1wwk_A 141 EGKTIGIIG--FGRIGYQVAKIANALGMNILLYDPYPN 176 (307)
T ss_dssp TTCEEEEEC--CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCceEEEEc--cCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 567899986 4666666654 4999999998763
No 413
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=79.66 E-value=3 Score=43.06 Aligned_cols=33 Identities=15% Similarity=0.069 Sum_probs=25.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYM 223 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~~M 223 (397)
.+.+|+++| +|+.+..+|++ |++|.+.|.+..-
T Consensus 256 ~GktVgIIG--~G~IG~~vA~~l~~~G~~Viv~d~~~~~ 292 (479)
T 1v8b_A 256 SGKIVVICG--YGDVGKGCASSMKGLGARVYITEIDPIC 292 (479)
T ss_dssp TTSEEEEEC--CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CCCEEEEEe--eCHHHHHHHHHHHhCcCEEEEEeCChhh
Confidence 577999987 56666655544 9999999999854
No 414
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=79.61 E-value=3 Score=43.21 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=25.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYM 223 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~~M 223 (397)
.+.+|.++| +|+.+..+|++ |.+|.+.|.+..-
T Consensus 276 ~GktVgIIG--~G~IG~~vA~~l~~~G~~V~v~d~~~~~ 312 (494)
T 3d64_A 276 AGKIAVVAG--YGDVGKGCAQSLRGLGATVWVTEIDPIC 312 (494)
T ss_dssp TTCEEEEEC--CSHHHHHHHHHHHTTTCEEEEECSCHHH
T ss_pred CCCEEEEEc--cCHHHHHHHHHHHHCCCEEEEEeCChHh
Confidence 577899987 56666666554 8999999999854
No 415
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=79.34 E-value=5.3 Score=37.26 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=28.7
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+|.++|+|. +.++..|++.|++|++.|.+..-+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~ 40 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVD 40 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHH
Confidence 5899999985 3457788899999999999987653
No 416
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=79.00 E-value=6.6 Score=34.63 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=22.8
Q ss_pred CCeEEEecC--CCChh-HHHHHHcCC--eEEEEeCCH
Q 015966 190 PPACLVPGA--GLGRL-ALEISHLGF--ISQGNEFSY 221 (397)
Q Consensus 190 ~~rVLvPGC--GlGRL-a~eLA~~Gf--~V~GnD~S~ 221 (397)
+.+||+.|+ |+|+- +..|+++|+ +|.+++-+.
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 458999996 34443 556777899 998887654
No 417
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=78.71 E-value=2.1 Score=42.48 Aligned_cols=49 Identities=24% Similarity=0.279 Sum_probs=36.5
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015966 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (397)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (397)
.|..+++.+..-++.. ....+|+++|+|.+.| |+.|+++|++|+-+|-+
T Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~ 65 (498)
T 2iid_A 15 DYEEFLEIARNGLKAT--SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS 65 (498)
T ss_dssp THHHHHHHHHHCSCCC--SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred hHHHHHHHhccCCCCC--CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3555666665544432 2467899999999988 67889999999999865
No 418
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=78.56 E-value=27 Score=32.94 Aligned_cols=162 Identities=12% Similarity=0.045 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHhcccccChhHHhhchH---------HHHH--HHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc----
Q 015966 146 DKVRCIIRNIVRDWAAEGKTERDQCYK---------PILE--ELDALFPNRSKESPPACLVPGAGLGRLALEISHL---- 210 (397)
Q Consensus 146 dkv~stL~q~~RDWS~eG~~ER~~~y~---------pIl~--~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---- 210 (397)
-.++.-|.+++++++. ...|+...|+ .++. +|-+..- .-+..|++.|+-.|.-+..+|..
T Consensus 20 ~~~~~~l~~~~~~~~~-~~~e~l~~~~~~~~~~~l~~~l~~~~l~~~i~----~vpG~ivE~GV~rG~S~~~~a~~~~~l 94 (257)
T 3tos_A 20 TETTQRLTKLLTNSPI-PTEELVNNLPLFLRRHQMTDLLSMDALYRQVL----DVPGVIMEFGVRFGRHLGTFAALRGVY 94 (257)
T ss_dssp HHHHHHHHHHHHTCCS-CGGGGGGCGGGGCCHHHHHHHHHHHHHHHHTT----TSCSEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-ChHHHHHhHHhhhhHHHHHHHHHHHHHHHHhh----CCCCeEEEEecccCHHHHHHHHHHHHh
Confidence 4466788889999985 3455544442 2222 2333322 24568999999999988887753
Q ss_pred ---C--CeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCcccc--------ccCCCCCCCCCCCCc
Q 015966 211 ---G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV--------SIPDIHPASAGITEG 277 (397)
Q Consensus 211 ---G--f~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v--------~iPDv~p~~~~~~~~ 277 (397)
| -.|.|.|-=.-|-.... .+...... ....++......+.++.+ .+|. ...+
T Consensus 95 ~~~~~~r~v~~fDTFeG~P~~~~------~D~~~~~~--~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~-------~~~~ 159 (257)
T 3tos_A 95 EPYNPLRRIVGFDTFTGFPDVND------VDRVGPTA--YQGRFAVPGGYPAYLKEVLDAHECSDFFGH-------VTQR 159 (257)
T ss_dssp CTTCTTCCEEEEECSSCCCSCCG------GGTTSTTC--STTTTCCCTTHHHHHHHHHHHHHTTSTTTT-------SCCS
T ss_pred cccCCCCEEEEEECCCCCCCCcc------cccccccc--ccCcccccchhHHHHHHHHHHHhhhhhcCC-------CCCc
Confidence 2 46888883322210000 00000000 000011000000001100 1111 1356
Q ss_pred ceeEecccccccCC---CCCCCCccEEEEeeccCC--hhhHHHHHHHHHHhccCCcEEE
Q 015966 278 FSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWI 331 (397)
Q Consensus 278 ls~~~GDF~ely~~---~~~~~~fD~VvT~FFIDt--a~Ni~~yi~~I~~~LKPGG~wI 331 (397)
+.++.|+|.+.... ....++||.| |||. -.+..+|++.++..|+|||++|
T Consensus 160 i~li~G~~~dTL~~~l~~~~~~~~dlv----~ID~D~Y~~t~~~le~~~p~l~~GGvIv 214 (257)
T 3tos_A 160 SVLVEGDVRETVPRYLAENPQTVIALA----YFDLDLYEPTKAVLEAIRPYLTKGSIVA 214 (257)
T ss_dssp EEEEESCHHHHHHHHHHHCTTCCEEEE----EECCCCHHHHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEEecHHHHHHHHHHhCCCCceEEE----EEcCcccchHHHHHHHHHHHhCCCcEEE
Confidence 99999999874320 0113457766 5553 3467789999999999999999
No 419
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=78.21 E-value=1.9 Score=41.42 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=28.1
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc--CCeEEEEeCCHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL--GFISQGNEFSYYMM 224 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~--Gf~V~GnD~S~~ML 224 (397)
+++.+||+.|+ |.|.++..+|+. |..|.+.+ |..-+
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~ 180 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKH 180 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHH
Confidence 46789999998 579999999986 47888887 54333
No 420
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=78.11 E-value=2.1 Score=42.66 Aligned_cols=31 Identities=10% Similarity=-0.031 Sum_probs=23.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~ 221 (397)
.+.+|.++|. |+++..+|++ |++|.+.|-+.
T Consensus 175 ~gktvGIIGl--G~IG~~vA~~l~~fG~~V~~~d~~~ 209 (365)
T 4hy3_A 175 AGSEIGIVGF--GDLGKALRRVLSGFRARIRVFDPWL 209 (365)
T ss_dssp SSSEEEEECC--SHHHHHHHHHHTTSCCEEEEECSSS
T ss_pred CCCEEEEecC--CcccHHHHHhhhhCCCEEEEECCCC
Confidence 5678999865 5666666654 88999988764
No 421
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=77.75 E-value=3.6 Score=42.07 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=25.8
Q ss_pred CCCeEEEecCCC-ChhHHHH-HHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGL-GRLALEI-SHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eL-A~~Gf~V~GnD~S~~ML 224 (397)
.+.+|++.|+|. |+.+..+ ...|.+|.+.|.++.-.
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra 256 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICA 256 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhh
Confidence 678999999885 4443333 34599999999998543
No 422
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=77.73 E-value=32 Score=30.46 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=28.9
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++.| .++..|+++|+.|...+-+..-+.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~ 43 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE 43 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4568999997544 357888888999999999886654
No 423
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=77.69 E-value=8.9 Score=32.62 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=38.0
Q ss_pred CCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 015966 296 GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (397)
Q Consensus 296 ~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~e 373 (397)
...|+|+.+- . ++.+.+.++.+.+ +..+++||..| .+ .+++.+++++.|..++-.
T Consensus 69 ~~~Dlvii~v--p-~~~v~~v~~~~~~-~g~~~i~i~~~----------------~~---~~~l~~~a~~~Gi~~igp 123 (145)
T 2duw_A 69 EKVDMVDVFR--N-SEAAWGVAQEAIA-IGAKTLWLQLG----------------VI---NEQAAVLAREAGLSVVMD 123 (145)
T ss_dssp SCCSEEECCS--C-STHHHHHHHHHHH-HTCCEEECCTT----------------CC---CHHHHHHHHTTTCEEECS
T ss_pred CCCCEEEEEe--C-HHHHHHHHHHHHH-cCCCEEEEcCC----------------hH---HHHHHHHHHHcCCEEEcC
Confidence 3578887753 2 3456677777666 67788888521 11 578999999999988853
No 424
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.64 E-value=21 Score=32.18 Aligned_cols=37 Identities=19% Similarity=0.092 Sum_probs=29.9
Q ss_pred CCCeEEEecC-C--CCh-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGA-G--LGR-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGC-G--lGR-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|+ | .|+ ++..|+++|+.|..++.+..-+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~ 61 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLG 61 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHH
Confidence 5678999987 4 565 58889999999999999876553
No 425
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=77.50 E-value=24 Score=32.85 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=29.6
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+.+||+-|++.| .++..|+++|+.|...+.+..-+.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~ 69 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALE 69 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 4668999998644 357888889999999999887654
No 426
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=77.47 E-value=1.5 Score=41.50 Aligned_cols=29 Identities=24% Similarity=0.181 Sum_probs=25.5
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeC
Q 015966 191 PACLVPGAGLGRL--ALEISHLGFISQGNEF 219 (397)
Q Consensus 191 ~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~ 219 (397)
.||+++|+|.+.| |..|+++|++|+-+|-
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 5899999999988 6788999999998873
No 427
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=77.22 E-value=3.7 Score=40.89 Aligned_cols=40 Identities=10% Similarity=-0.110 Sum_probs=35.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~ 228 (397)
++..++|-.||.|..+..|+++ | -.|.|+|.+..|+..++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 6789999999999999999887 3 37999999999998775
No 428
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=77.18 E-value=2.2 Score=41.71 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=27.0
Q ss_pred CCCeEEEecCC-CChhHHHH-HHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAG-LGRLALEI-SHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eL-A~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+.|+| .|+.+..+ +.+|.+|++.|.+..-+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~ 204 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLS 204 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 34799999985 45554444 446999999999987654
No 429
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=77.18 E-value=15 Score=33.32 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=27.1
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCCe-EEEEeCCHHHH
Q 015966 190 PPACLVPGAGL-GR-LALEISHLGFI-SQGNEFSYYMM 224 (397)
Q Consensus 190 ~~rVLvPGCGl-GR-La~eLA~~Gf~-V~GnD~S~~ML 224 (397)
+.+|.++|+|. |+ ++..|++.|++ |...|-+..-+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~ 47 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESA 47 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHH
Confidence 45899999973 33 46677788999 89999988654
No 430
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=77.10 E-value=2.8 Score=34.35 Aligned_cols=36 Identities=19% Similarity=0.088 Sum_probs=27.2
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 190 PPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 190 ~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
..+|++.|+|. |+ ++..|+++|++|.++|.+..-+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~ 43 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIE 43 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence 45899999854 22 45566777999999999987653
No 431
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=77.09 E-value=11 Score=35.27 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeCCHHH
Q 015966 189 SPPACLVPGAGLGRLALEIS----HLGFISQGNEFSYYM 223 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA----~~Gf~V~GnD~S~~M 223 (397)
.+.+|+++|+| +.+..+| ..|.+|.+.|-+..-
T Consensus 154 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~ 190 (293)
T 3d4o_A 154 HGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDL 190 (293)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 57799999865 5554444 459999999998754
No 432
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=76.78 E-value=29 Score=31.28 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=28.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
++.+||+-|++-| .++..|+++|++|..++.+..-+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 45 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERA 45 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997544 35778888999999999987654
No 433
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=76.43 E-value=2.3 Score=35.83 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=26.2
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHH
Q 015966 189 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYM 223 (397)
Q Consensus 189 ~~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~M 223 (397)
.+.+|++.|+|. |+ ++..|.+.|+.|.++|.+..-
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 567999999864 33 345566679999999988743
No 434
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=76.07 E-value=2.2 Score=41.62 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~ 221 (397)
.+.+|.++|. |+++..+|++ |++|.+.|-+.
T Consensus 144 ~g~tvGIIG~--G~IG~~vA~~l~~~G~~V~~~d~~~ 178 (330)
T 4e5n_A 144 DNATVGFLGM--GAIGLAMADRLQGWGATLQYHEAKA 178 (330)
T ss_dssp TTCEEEEECC--SHHHHHHHHHTTTSCCEEEEECSSC
T ss_pred CCCEEEEEee--CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5679999975 5676666654 88999999875
No 435
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=75.73 E-value=12 Score=35.27 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGLGRLALEIS----HLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA----~~Gf~V~GnD~S~~ML 224 (397)
.+.+|+++|+| +.+..+| ..|++|.+.|-+..-+
T Consensus 156 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~d~~~~~~ 193 (300)
T 2rir_A 156 HGSQVAVLGLG--RTGMTIARTFAALGANVKVGARSSAHL 193 (300)
T ss_dssp TTSEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEEccc--HHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 57899999974 5554444 4599999999987543
No 436
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=75.55 E-value=12 Score=35.59 Aligned_cols=112 Identities=12% Similarity=0.084 Sum_probs=61.9
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCCC
Q 015966 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (397)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv~ 268 (397)
.||=++|.|. ..+|.-|++.||+|++.|.+..-.. . + . .
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~----------~---l-----~--------------~------- 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAE----------P---L-----T--------------K------- 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------C----------T---T-----T--------------T-------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHH----------H---H-----H--------------H-------
Confidence 3788887765 3446677788999999998874321 0 0 0 0
Q ss_pred CCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHH-HHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVE-YIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 269 p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~-yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
.+.. .+.+..++- ..-|+|++|. .+...+.+ +...+...|++|++||+.+-..+
T Consensus 47 -------~G~~-~~~s~~e~~------~~~dvvi~~l--~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p--------- 101 (297)
T 4gbj_A 47 -------LGAT-VVENAIDAI------TPGGIVFSVL--ADDAAVEELFSMELVEKLGKDGVHVSMSTISP--------- 101 (297)
T ss_dssp -------TTCE-ECSSGGGGC------CTTCEEEECC--SSHHHHHHHSCHHHHHHHCTTCEEEECSCCCH---------
T ss_pred -------cCCe-EeCCHHHHH------hcCCceeeec--cchhhHHHHHHHHHHhhcCCCeEEEECCCCCh---------
Confidence 0011 122333432 3458888764 33333333 34668889999999997543211
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
-+..++.+.+++.|..++.
T Consensus 102 ------~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 102 ------ETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp ------HHHHHHHHHHHHTTCEEEE
T ss_pred ------HHHHHHHHHHHhcCCceec
Confidence 1234566677777887775
No 437
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=75.38 E-value=12 Score=34.72 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=27.8
Q ss_pred CeEEEecC-CC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 015966 191 PACLVPGA-GL-G-RLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 191 ~rVLvPGC-Gl-G-RLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
.+|.++|+ |. | .++..|++.|++|.+.|-+..-+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~ 48 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGR 48 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 48999999 84 3 45778888999999999987654
No 438
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=75.27 E-value=6.3 Score=36.45 Aligned_cols=35 Identities=11% Similarity=0.161 Sum_probs=27.9
Q ss_pred CeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 191 PACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 191 ~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+|.++|+|. |+ ++..|++.|++|.+.|.+..-+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~ 42 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIA 42 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 4899999985 33 46778888999999999987653
No 439
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=75.24 E-value=2.8 Score=40.51 Aligned_cols=32 Identities=6% Similarity=-0.011 Sum_probs=23.3
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeC-CHH
Q 015966 189 SPPACLVPGAGLGRLALEISH----LGFISQGNEF-SYY 222 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~----~Gf~V~GnD~-S~~ 222 (397)
.+.+|.++|. |+++..+|+ .|++|.+.|- +..
T Consensus 145 ~g~~vgIIG~--G~IG~~~A~~l~~~G~~V~~~d~~~~~ 181 (320)
T 1gdh_A 145 DNKTLGIYGF--GSIGQALAKRAQGFDMDIDYFDTHRAS 181 (320)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred CCCEEEEECc--CHHHHHHHHHHHHCCCEEEEECCCCcC
Confidence 5678999865 666666554 4899999998 653
No 440
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=74.91 E-value=8.9 Score=35.05 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=25.7
Q ss_pred eEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 015966 192 ACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 192 rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML 224 (397)
+|.++|+|. |+ ++..|++ |++|.+.|-+..-+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~ 36 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKA 36 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHH
Confidence 689999985 44 5777888 99999999987654
No 441
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=74.78 E-value=19 Score=35.04 Aligned_cols=33 Identities=15% Similarity=-0.035 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCChhH----HHHHHcCCeEEEEeCCHH
Q 015966 189 SPPACLVPGAGLGRLA----LEISHLGFISQGNEFSYY 222 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa----~eLA~~Gf~V~GnD~S~~ 222 (397)
+..+||+-|+ +|.++ ..|++.|++|.+++-+..
T Consensus 68 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 68 PLGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 4568999995 45444 445566999999988765
No 442
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=74.71 E-value=1.5 Score=42.05 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=26.9
Q ss_pred CC-CeEEEecC--CCChhHHHHHHc-CCeEEEEeCCH
Q 015966 189 SP-PACLVPGA--GLGRLALEISHL-GFISQGNEFSY 221 (397)
Q Consensus 189 ~~-~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~ 221 (397)
++ .+||+.|+ |.|.++..||+. |+.|.++.-+.
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 202 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 56 89999986 789999999885 99988876443
No 443
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=74.54 E-value=4.7 Score=37.45 Aligned_cols=34 Identities=15% Similarity=-0.013 Sum_probs=26.9
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHH
Q 015966 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
.+|.++|+|. +.++..|++.|++|++.|.+..-+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 37 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKA 37 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 4799999875 335777888899999999987654
No 444
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=74.00 E-value=45 Score=29.91 Aligned_cols=36 Identities=25% Similarity=0.174 Sum_probs=28.8
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
++.+||+-|++.| .++..|+++|+.|...+.+..-+
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~ 46 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA 46 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999998654 35778888999999999987654
No 445
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=73.94 E-value=8.9 Score=40.16 Aligned_cols=138 Identities=19% Similarity=0.146 Sum_probs=0.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHcC--------------CeEEEEeC---CHHHHHHHHhhhhcccccCcccc--------
Q 015966 188 ESPPACLVPGAGLGRLALEISHLG--------------FISQGNEF---SYYMMICSSFILNHTETAGEWNI-------- 242 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~G--------------f~V~GnD~---S~~ML~~s~fiLn~~~~~~~~~I-------- 242 (397)
++..+||+.|-|||..+....+.- -+.+++|. +...|..+- ..+.-
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~---------~~~~~~~~~~~~l 135 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAH---------QHWPELAPWAEQL 135 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHH---------TTCGGGHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHH---------HhChhhHHHHHHH
Q ss_pred ---ccccccccCCCCcccCccccccCCCCCCCCCCCCcceeEecccccccCCCCC----CCCccEEEEeec---cCChhh
Q 015966 243 ---YPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQ----VGAWDAVVTCFF---IDTAHN 312 (397)
Q Consensus 243 ---yPfi~~~Sn~~s~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDF~ely~~~~~----~~~fD~VvT~FF---IDta~N 312 (397)
||-...-++....++ -.++ +.+..||..+... .. ...||+|+-==| .....=
T Consensus 136 ~~~~~~~~~~~~~~~~~~--~~~~--------------l~l~~gd~~~~l~--~~~~~~~~~~d~~~~D~f~p~~np~~w 197 (676)
T 3ps9_A 136 QAQWPMPLPGCHRLLLDA--GRVT--------------LDLWFGDINELTS--QLDDSLNQKVDAWFLDGFAPAKNPDMW 197 (676)
T ss_dssp HHHCCCCCSEEEEEEEGG--GTEE--------------EEEEESCHHHHGG--GBCGGGTTCEEEEEECCSCGGGCGGGS
T ss_pred HHhCcccCCCceEEEecC--CcEE--------------EEEecCCHHHHHH--hcccccCCcccEEEECCCCCcCChhhh
Q ss_pred HHHHHHHHHHhccCCcEEEEecCCcchhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 015966 313 IVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 313 i~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
-.++|+.+++++||||.+.. .-....+++.++++||.+.+
T Consensus 198 ~~~~~~~l~~~~~~g~~~~t--------------------~~~~~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 198 TQNLFNAMARLARPGGTLAT--------------------FTSAGFVRRGLQDAGFTMQK 237 (676)
T ss_dssp CHHHHHHHHHHEEEEEEEEE--------------------SCCCHHHHHHHHHHTCEEEE
T ss_pred hHHHHHHHHHHhCCCCEEEe--------------------ccCcHHHHHHHHhCCeEEEe
No 446
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=73.86 E-value=33 Score=31.58 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
++.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~ 66 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAA 66 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999998654 36888899999999999987654
No 447
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=73.83 E-value=2 Score=41.45 Aligned_cols=29 Identities=38% Similarity=0.384 Sum_probs=26.5
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015966 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (397)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (397)
+|+++|+|.+.| |+.|+++|++|+-+|-+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~ 32 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERL 32 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCC
Confidence 699999999998 78999999999999865
No 448
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=73.68 E-value=51 Score=29.73 Aligned_cols=37 Identities=14% Similarity=0.051 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++-| + ++..|+++|++|...+.+..-+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 49 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLE 49 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHH
Confidence 4678999998554 3 57888999999999999887654
No 449
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=73.45 E-value=13 Score=37.08 Aligned_cols=34 Identities=24% Similarity=0.114 Sum_probs=28.0
Q ss_pred eEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 192 ACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 192 rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
+|.++|+|. | .+|..||+.|++|+++|.+..-+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~ 37 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKID 37 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 689999885 3 357788999999999999987654
No 450
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=73.22 E-value=5.5 Score=41.10 Aligned_cols=49 Identities=12% Similarity=0.027 Sum_probs=30.6
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCC-ChhHHHHH-HcCCeEEEEeCCHHH
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAGL-GRLALEIS-HLGFISQGNEFSYYM 223 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGl-GRLa~eLA-~~Gf~V~GnD~S~~M 223 (397)
-+++.+.+.... .-.+.+|++.|+|. |+.+..++ ..|.+|.+.|.++.-
T Consensus 232 slvdgI~Ratg~--~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~ 282 (464)
T 3n58_A 232 SLVDGIRRGTDV--MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPIC 282 (464)
T ss_dssp HHHHHHHHHHCC--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred HHHHHHHHhcCC--cccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 355555543321 12678999999774 44433333 348999999998854
No 451
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=72.99 E-value=46 Score=29.95 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=29.1
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++-| .++..|+++|+.|...+.+..-+.
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 44 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLE 44 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999997543 357788889999999999887654
No 452
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=72.77 E-value=1.4 Score=42.20 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=27.9
Q ss_pred CeEEEe-cC-CCChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 015966 191 PACLVP-GA-GLGRLALEISHL-GFISQGNEFSYYMMICS 227 (397)
Q Consensus 191 ~rVLvP-GC-GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s 227 (397)
.+||+. |+ |.|.++..+|+. |.+|.+++.|..-+..+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 205 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL 205 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 577775 33 578888888875 99999999988765543
No 453
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=72.73 E-value=38 Score=31.08 Aligned_cols=36 Identities=22% Similarity=0.223 Sum_probs=28.0
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
++.+||+-|++.| .++..|+++|+.|..++-+..-+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 69 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL 69 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999998644 35778888899999999886554
No 454
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=72.56 E-value=38 Score=31.06 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=27.7
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+.+||+-|++.| .++..|+++|+.|..++-+..-+.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 62 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVS 62 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4568999997544 357788889999999999876553
No 455
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=72.35 E-value=39 Score=30.97 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=26.1
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~ 221 (397)
++.+||+-|++.| .++..|+++|+.|..++-+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 65 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD 65 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH
Confidence 5678999998544 36788888999999998554
No 456
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=72.25 E-value=2.3 Score=41.27 Aligned_cols=29 Identities=34% Similarity=0.297 Sum_probs=26.3
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015966 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (397)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (397)
+|+++|+|.+.| |+.|+++|++|+-+|-+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 699999999998 68899999999999864
No 457
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=72.21 E-value=2.5 Score=40.79 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=27.9
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S~ 221 (397)
+..+|+++|+|.+.| |..|+++|++|+-+|-+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 567999999999987 678899999999998643
No 458
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=72.10 E-value=13 Score=35.45 Aligned_cols=31 Identities=10% Similarity=0.067 Sum_probs=25.5
Q ss_pred CeEEEecCCC-C-hhHHHHHHcC-CeEEEEeCCH
Q 015966 191 PACLVPGAGL-G-RLALEISHLG-FISQGNEFSY 221 (397)
Q Consensus 191 ~rVLvPGCGl-G-RLa~eLA~~G-f~V~GnD~S~ 221 (397)
.+|.++|+|. | .++..|++.| ++|++.|.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5799999884 3 3577788889 9999999986
No 459
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=72.10 E-value=4.5 Score=33.52 Aligned_cols=37 Identities=19% Similarity=-0.010 Sum_probs=28.2
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
-+.+|++.|+|. |+ ++..|.+.|+.|+++|.+..-+.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~ 44 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVD 44 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHH
Confidence 356899999864 33 35566677999999999997754
No 460
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=72.08 E-value=13 Score=37.81 Aligned_cols=37 Identities=11% Similarity=0.050 Sum_probs=30.8
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
...+|.++|+|. |. +|..||+.|++|+++|.+..-+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~ 45 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKID 45 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 457999999995 43 57889999999999999987654
No 461
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=71.94 E-value=30 Score=34.64 Aligned_cols=40 Identities=13% Similarity=0.020 Sum_probs=33.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--Ce-----EEEEeCCHHHHHHHH
Q 015966 189 SPPACLVPGAGLGRLALEISHLG--FI-----SQGNEFSYYMMICSS 228 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~-----V~GnD~S~~ML~~s~ 228 (397)
+..+||++=||.|.+..-|-+.| ++ |.++|+......+.+
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~ 55 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYV 55 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHH
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHH
Confidence 46799999999999998888888 33 668999998887655
No 462
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=71.82 E-value=27 Score=31.91 Aligned_cols=35 Identities=20% Similarity=0.099 Sum_probs=28.0
Q ss_pred CeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 191 PACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 191 ~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+|+++|+|. | .++..|++.|++|+..|-+..-+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~ 40 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIE 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence 4899999984 3 347778889999999999886543
No 463
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=71.67 E-value=8.5 Score=39.08 Aligned_cols=37 Identities=14% Similarity=0.045 Sum_probs=30.1
Q ss_pred CCCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
...||-++|.|. | -+|..||+.|++|++.|.+..-+.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~ 45 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIE 45 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 457899999985 2 347889999999999999987653
No 464
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=71.58 E-value=45 Score=29.76 Aligned_cols=37 Identities=19% Similarity=0.079 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++.| .++..|+++|+.|...+-+..-+.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~ 47 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAE 47 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 4578999998654 368888999999999999886653
No 465
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=71.46 E-value=30 Score=31.01 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~ 221 (397)
...+||+-|++.| .++..|+++|+.|..++-+.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 3468999997543 35788888999999886553
No 466
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.38 E-value=13 Score=37.52 Aligned_cols=35 Identities=17% Similarity=-0.011 Sum_probs=28.3
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+|.++|+|. +.+|..||+.|++|++.|.+..-+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~ 39 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIE 39 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHH
Confidence 4799998875 2447788899999999999987654
No 467
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=71.00 E-value=4.7 Score=38.49 Aligned_cols=41 Identities=27% Similarity=0.391 Sum_probs=33.6
Q ss_pred CCCCeEEEecCC--CChhHHHHHHc--CCeEEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAG--LGRLALEISHL--GFISQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCG--lGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~ 228 (397)
+++.+||+.|+| .|.++..+|+. |+.|.+.+.|...+..++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~ 213 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK 213 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 367899999988 88988888765 999999999988775443
No 468
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=70.20 E-value=2.4 Score=39.66 Aligned_cols=29 Identities=28% Similarity=0.218 Sum_probs=25.5
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015966 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (397)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (397)
-|+++|+|...+ |..||++|++|+-+|-.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 499999999887 78899999999999853
No 469
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=70.11 E-value=44 Score=30.22 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCC
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFS 220 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S 220 (397)
++.+||+-|++.| .++..|+++|+.|..++-+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999998644 3577888889999998874
No 470
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=70.01 E-value=45 Score=30.50 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=28.7
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++-| + ++..|+++|+.|..++.+..-+.
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~ 64 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVA 64 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999997543 3 57788888999999998876553
No 471
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=69.99 E-value=52 Score=29.79 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+.+||+-|++.| + ++..|+++|+.|...+.+..-+.
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 58 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD 58 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999998543 3 57788888999999999876654
No 472
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=69.83 E-value=13 Score=35.60 Aligned_cols=47 Identities=9% Similarity=-0.027 Sum_probs=33.9
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
..|++.+++. + +..|+.-.||.+.+--.+++.|+++.++|....+-.
T Consensus 220 k~i~~~i~~~-~------g~~~i~~~~g~~~~l~~l~~~g~d~~~~d~~~dl~~ 266 (338)
T 2eja_A 220 NYLISELKDF-S------DTPVIYFFRGSSSFIDLAVDYRADALSVDWSVDIPE 266 (338)
T ss_dssp HHHHHHHHHH-C------CCCEEEEESSHHHHHHHHTTSCCSEEECCTTSCHHH
T ss_pred HHHHHHHhhc-C------CCCEEEEcCCcHHHHHHHHHcCCCEEEeCCCCCHHH
Confidence 3445555543 2 345677789998888889999999999998765543
No 473
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=69.44 E-value=45 Score=30.00 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=28.2
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++.| .++..|+++|+.|...+-+..-+.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~ 67 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLR 67 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 4678999997543 346777888999999999886653
No 474
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=69.17 E-value=3.6 Score=40.54 Aligned_cols=31 Identities=10% Similarity=0.013 Sum_probs=22.8
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLGRLALEIS----HLGFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA----~~Gf~V~GnD~S~ 221 (397)
.+.+|.++|.| +++..+| ..|++|.+.|-+.
T Consensus 159 ~g~tvGIIGlG--~IG~~vA~~l~~~G~~V~~~d~~~ 193 (352)
T 3gg9_A 159 KGQTLGIFGYG--KIGQLVAGYGRAFGMNVLVWGREN 193 (352)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSHH
T ss_pred CCCEEEEEeEC--HHHHHHHHHHHhCCCEEEEECCCC
Confidence 57789999765 5554444 4599999999875
No 475
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=69.16 E-value=14 Score=37.89 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=69.8
Q ss_pred CCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccCccccccccccccCCCCcccCccccccCCC
Q 015966 190 PPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (397)
Q Consensus 190 ~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~~s~fiLn~~~~~~~~~IyPfi~~~Sn~~s~~~qlr~v~iPDv 267 (397)
..+|-++|+|. | .+|.-|++.|++|.+.|.+..-+.... .. . +| . ..+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~---~~--~------~~-----------~---~gi~---- 60 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFL---AN--E------AK-----------G---KSII---- 60 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHH---HT--T------TT-----------T---SSEE----
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---cc--c------cc-----------C---CCeE----
Confidence 35799999884 4 368888999999999999987653211 00 0 00 0 0111
Q ss_pred CCCCCCCCCcceeEecccccccCCCCCCCCccEEEEeeccCChhhHHHHHHHHHHhccCCcEEEEecCCcchhhhccCCC
Q 015966 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (397)
Q Consensus 268 ~p~~~~~~~~ls~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yi~~I~~~LKPGG~wIN~GPLlYh~~d~~g~~ 347 (397)
...|..++-. .-..-|+|+.+-- +...+.+.++.+...|+||-++|+.+...+
T Consensus 61 -------------~~~s~~e~v~---~l~~aDvVil~Vp--~~~~v~~vl~~l~~~l~~g~iIId~s~~~~--------- 113 (497)
T 2p4q_A 61 -------------GATSIEDFIS---KLKRPRKVMLLVK--AGAPVDALINQIVPLLEKGDIIIDGGNSHF--------- 113 (497)
T ss_dssp -------------CCSSHHHHHH---TSCSSCEEEECCC--SSHHHHHHHHHHGGGCCTTCEEEECSCCCH---------
T ss_pred -------------EeCCHHHHHh---cCCCCCEEEEEcC--ChHHHHHHHHHHHHhCCCCCEEEECCCCCh---------
Confidence 0112222211 0023588876532 323466788889999999999998654322
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 015966 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (397)
Q Consensus 348 ~~~~ieLS~EEl~~ll~~~GFeii~ 372 (397)
.+.+++.+.+.+.|+.++.
T Consensus 114 ------~~~~~l~~~l~~~g~~~v~ 132 (497)
T 2p4q_A 114 ------PDSNRRYEELKKKGILFVG 132 (497)
T ss_dssp ------HHHHHHHHHHHHTTCEEEE
T ss_pred ------hHHHHHHHHHHHcCCceeC
Confidence 1224455556566776553
No 476
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=69.11 E-value=5.4 Score=38.51 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=22.6
Q ss_pred CCCeEEEecCCCChhHH----HHHHcCCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLGRLAL----EISHLGFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~----eLA~~Gf~V~GnD~S~ 221 (397)
.+.+|.++|+| +++. .++..|++|.+.|-+.
T Consensus 154 ~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLG--RIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcC--HHHHHHHHHHHHCCCEEEEECCCC
Confidence 56789999875 4444 4455699999999765
No 477
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=69.03 E-value=18 Score=33.77 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=27.7
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCC---eEEEEeCCHHHH
Q 015966 190 PPACLVPGAGL-GR-LALEISHLGF---ISQGNEFSYYMM 224 (397)
Q Consensus 190 ~~rVLvPGCGl-GR-La~eLA~~Gf---~V~GnD~S~~ML 224 (397)
..+|.++|||. |+ ++.-|++.|+ +|...|-+..-+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~ 42 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKL 42 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHH
Confidence 35799999984 43 6777888899 899999988654
No 478
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=68.66 E-value=50 Score=29.86 Aligned_cols=37 Identities=16% Similarity=0.035 Sum_probs=28.8
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+.+||+-|++.| .++..|+++|++|..++.+..-+.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 48 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADID 48 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999997543 357778888999999999887653
No 479
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=68.54 E-value=4.6 Score=39.11 Aligned_cols=33 Identities=12% Similarity=-0.018 Sum_probs=23.9
Q ss_pred CCCeEEEecCCCChhHHHH----HHcCCeEEEEeCCHHH
Q 015966 189 SPPACLVPGAGLGRLALEI----SHLGFISQGNEFSYYM 223 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eL----A~~Gf~V~GnD~S~~M 223 (397)
.+.+|.++|+ |+++..+ +..|++|.+.|-+..-
T Consensus 149 ~g~~vgIIG~--G~iG~~iA~~l~~~G~~V~~~d~~~~~ 185 (334)
T 2dbq_A 149 YGKTIGIIGL--GRIGQAIAKRAKGFNMRILYYSRTRKE 185 (334)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred CCCEEEEEcc--CHHHHHHHHHHHhCCCEEEEECCCcch
Confidence 5678999986 5555444 4559999999987643
No 480
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=68.53 E-value=11 Score=39.17 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=32.3
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCC-CCh-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 173 PILEELDALFPNRSKESPPACLVPGAG-LGR-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCG-lGR-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+++.|.+..... -.+.+|++.|+| .|+ .|..|+..|.+|.++|.+..-+.
T Consensus 250 sl~dgi~r~tg~~--L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~ 302 (488)
T 3ond_A 250 SLPDGLMRATDVM--IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICAL 302 (488)
T ss_dssp HHHHHHHHHHCCC--CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred HHHHHHHHHcCCc--ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 3555555433211 257899999987 222 24455566999999999986543
No 481
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=68.53 E-value=32 Score=38.66 Aligned_cols=41 Identities=15% Similarity=-0.089 Sum_probs=34.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHcCC-e-EEEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGLGRLALEISHLGF-I-SQGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~Gf-~-V~GnD~S~~ML~~s~ 228 (397)
....++|++=||.|.+..-|.+.|+ + |.|+|+......+.+
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~ 580 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFR 580 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHH
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHH
Confidence 3678999999999999999999998 4 679999998876543
No 482
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=68.53 E-value=12 Score=34.62 Aligned_cols=40 Identities=15% Similarity=-0.001 Sum_probs=24.8
Q ss_pred hhCCCCCCCCCCeEEEecCCCC--hhHHHHHHcCCeEEEEeC
Q 015966 180 ALFPNRSKESPPACLVPGAGLG--RLALEISHLGFISQGNEF 219 (397)
Q Consensus 180 ~~~p~~~~~~~~rVLvPGCGlG--RLa~eLA~~Gf~V~GnD~ 219 (397)
++||-.-.-.+.+||++|+|-= |-+..|.+.|..|+.++-
T Consensus 21 ~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 21 HMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp -CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CccccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 3455222236789999998742 224456677998887753
No 483
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=67.93 E-value=26 Score=33.26 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=26.7
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHH
Q 015966 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
.||=.+|.|. ..+|.-|++.||.|++.|.+..-.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~ 39 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAV 39 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence 3677887775 345777888899999999998765
No 484
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=67.78 E-value=4.9 Score=38.93 Aligned_cols=37 Identities=19% Similarity=0.063 Sum_probs=28.6
Q ss_pred CCCeEEEecCC-CChhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAG-LGRLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.|||++||| +|+.+.+.....++|+..|.+..-+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~ 52 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLE 52 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHH
T ss_pred CccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHH
Confidence 56799999998 67776655556799999999886654
No 485
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=67.64 E-value=5.7 Score=48.68 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=31.7
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHH
Q 015966 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMI 225 (397)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~ 225 (397)
+++.+||+.|+ |.|..+..+|+. |..|.+.+-|..-..
T Consensus 1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~ 1706 (2512)
T 2vz8_A 1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRA 1706 (2512)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhH
Confidence 47889999974 889999999886 999999998876543
No 486
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=67.47 E-value=3.2 Score=38.59 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=26.9
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015966 191 PACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (397)
Q Consensus 191 ~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (397)
..|+++|+|.+.+ |+.||++|++|+-+|-.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4799999999887 78999999999999865
No 487
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=67.41 E-value=69 Score=29.62 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=27.9
Q ss_pred CeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015966 191 PACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (397)
Q Consensus 191 ~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (397)
++||+=|++.| .++..||+.|++|..+|.+..-+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~ 39 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS 39 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 47999988665 35888899999999999998665
No 488
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=67.23 E-value=1.4 Score=42.36 Aligned_cols=33 Identities=21% Similarity=0.028 Sum_probs=23.3
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCH
Q 015966 189 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~ 221 (397)
.+.+|.++|.|. +.+|..+...|++|.+.|-+.
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~ 155 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSS 155 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSC
T ss_pred ecchheeeccCchhHHHHHHHHhhCcEEEEEeccc
Confidence 567999998764 233455555699999988764
No 489
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=67.11 E-value=62 Score=29.39 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=25.4
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCC
Q 015966 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFS 220 (397)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S 220 (397)
++.+||+-|++.| .++..|+++|+.|..+|.+
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~ 48 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDIC 48 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecc
Confidence 5678999998654 3578888899999999873
No 490
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=66.97 E-value=3 Score=41.52 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=26.9
Q ss_pred CCeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015966 190 PPACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (397)
Q Consensus 190 ~~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (397)
...|+|+|+|.|.| |..||+.|++|+-+|-.
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45799999999998 67889999999999854
No 491
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=66.77 E-value=2.9 Score=41.29 Aligned_cols=31 Identities=26% Similarity=0.190 Sum_probs=26.0
Q ss_pred CCeEEEecCCCChh--HHHHHHc-CCeEEEEeCC
Q 015966 190 PPACLVPGAGLGRL--ALEISHL-GFISQGNEFS 220 (397)
Q Consensus 190 ~~rVLvPGCGlGRL--a~eLA~~-Gf~V~GnD~S 220 (397)
...|+++|+|.+.| |+.|+++ |++|+-+|-+
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~ 43 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSN 43 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECC
Confidence 45799999999999 5788985 9999988843
No 492
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=66.76 E-value=22 Score=36.02 Aligned_cols=37 Identities=8% Similarity=-0.045 Sum_probs=28.4
Q ss_pred CCCeEEEecCCCC--hhHHHHHHcCCeEEEEeCCHHHHHH
Q 015966 189 SPPACLVPGAGLG--RLALEISHLGFISQGNEFSYYMMIC 226 (397)
Q Consensus 189 ~~~rVLvPGCGlG--RLa~eLA~~Gf~V~GnD~S~~ML~~ 226 (397)
...+|-++|+|.= .+|..||+ |++|++.|.+..-+..
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~ 73 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDM 73 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhH
Confidence 3458999998852 34667777 9999999999987643
No 493
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=66.54 E-value=80 Score=29.12 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=28.2
Q ss_pred CCCeEEEecCC----CCh-hHHHHHHcCCeEEEEeCCHHH
Q 015966 189 SPPACLVPGAG----LGR-LALEISHLGFISQGNEFSYYM 223 (397)
Q Consensus 189 ~~~rVLvPGCG----lGR-La~eLA~~Gf~V~GnD~S~~M 223 (397)
++.+||+-|++ .|+ ++..|+++|+.|..++.+..-
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~ 69 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL 69 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 46789999965 555 688899999999999988643
No 494
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=65.73 E-value=3.4 Score=39.92 Aligned_cols=28 Identities=25% Similarity=0.246 Sum_probs=25.3
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeC
Q 015966 192 ACLVPGAGLGRL--ALEISHLGFISQGNEF 219 (397)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~ 219 (397)
.|+|+|+|.+.| |+.|+++|++|+-+|-
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEG 32 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 699999999987 7889999999999985
No 495
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=65.72 E-value=76 Score=28.48 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
++.+||+-|++.| + ++..|+++|++|..++.+..-+.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 50 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAE 50 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 5678999997654 3 57778888999999999886553
No 496
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=65.67 E-value=23 Score=36.08 Aligned_cols=37 Identities=27% Similarity=0.172 Sum_probs=29.2
Q ss_pred CCCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHH
Q 015966 189 SPPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMI 225 (397)
Q Consensus 189 ~~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (397)
.+.+|-++|+|. | .++.-|++.|++|.+.|-+..-+.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~ 52 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTE 52 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 456899999884 3 467888899999999999986543
No 497
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=65.66 E-value=7.3 Score=34.04 Aligned_cols=31 Identities=10% Similarity=-0.046 Sum_probs=23.5
Q ss_pred eEEEecC--CCCh-hHHHHH-HcCCeEEEEeCCHH
Q 015966 192 ACLVPGA--GLGR-LALEIS-HLGFISQGNEFSYY 222 (397)
Q Consensus 192 rVLvPGC--GlGR-La~eLA-~~Gf~V~GnD~S~~ 222 (397)
+||+.|+ |+|+ ++..|+ +.|++|.+++-+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 5999995 3444 356677 78999999998864
No 498
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=65.65 E-value=2.3 Score=41.47 Aligned_cols=31 Identities=16% Similarity=0.043 Sum_probs=22.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 015966 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 221 (397)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~ 221 (397)
.+.+|.++| +|+++..+|++ |++|.+.|-+.
T Consensus 144 ~g~~vgIiG--~G~IG~~~A~~l~~~G~~V~~~d~~~ 178 (333)
T 1dxy_A 144 GQQTVGVMG--TGHIGQVAIKLFKGFGAKVIAYDPYP 178 (333)
T ss_dssp GGSEEEEEC--CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEC--cCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 567899986 56666666554 88898887654
No 499
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.59 E-value=9.1 Score=33.32 Aligned_cols=31 Identities=23% Similarity=0.112 Sum_probs=23.2
Q ss_pred CeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCH
Q 015966 191 PACLVPGA--GLGR-LALEISHLGFISQGNEFSY 221 (397)
Q Consensus 191 ~rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~ 221 (397)
.+||+.|+ ++|+ ++..|+++|++|.+++-+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 58999995 3444 4666777899999988775
No 500
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=65.59 E-value=8 Score=37.13 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=35.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHcCCeE---EEEeCCHHHHHHHH
Q 015966 188 ESPPACLVPGAGLGRLALEISHLGFIS---QGNEFSYYMMICSS 228 (397)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~Gf~V---~GnD~S~~ML~~s~ 228 (397)
+.+.+||++=||.|.+...+.+.|+++ .++|++.....+.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~ 57 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGM 57 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHH
Confidence 467899999999999999999999986 79999998876544
Done!