Your job contains 1 sequence.
>015967
MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQ
PDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVA
PGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASD
DELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSD
GFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQR
KIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQ
PYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015967
(397 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2042466 - symbol:AT2G44580 species:3702 "Arabi... 1111 1.4e-112 1
UNIPROTKB|Q9BVC3 - symbol:DSCC1 "Sister chromatid cohesio... 414 9.9e-39 1
RGD|1561749 - symbol:Dscc1 "defective in sister chromatid... 409 3.4e-38 1
UNIPROTKB|F1MTU0 - symbol:DSCC1 "Uncharacterized protein"... 396 8.0e-37 1
MGI|MGI:1919357 - symbol:Dscc1 "defective in sister chrom... 396 8.0e-37 1
ZFIN|ZDB-GENE-040912-35 - symbol:dscc1 "defective in sist... 387 7.2e-36 1
UNIPROTKB|Q6GL75 - symbol:dscc1 "Sister chromatid cohesio... 367 9.5e-34 1
UNIPROTKB|Q6GMB0 - symbol:dscc1 "Sister chromatid cohesio... 367 9.5e-34 1
UNIPROTKB|F1NKY0 - symbol:DSCC1 "Uncharacterized protein"... 361 4.1e-33 1
UNIPROTKB|F1S283 - symbol:DSCC1 "Uncharacterized protein"... 360 5.2e-33 1
DICTYBASE|DDB_G0271400 - symbol:dcc1 "sister chromatid co... 177 2.9e-15 2
SGD|S000000521 - symbol:DCC1 "Subunit of a Ctf18 RFC-like... 145 3.9e-08 2
POMBASE|SPAC31A2.15c - symbol:dcc1 "Ctf18 RFC-like comple... 116 2.4e-06 2
>TAIR|locus:2042466 [details] [associations]
symbol:AT2G44580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] EMBL:CP002685 KO:K11271 InterPro:IPR019128
Pfam:PF09724 OMA:FSLREKW IPI:IPI00546009 RefSeq:NP_181986.2
UniGene:At.71271 PRIDE:F4IU60 EnsemblPlants:AT2G44580.1
GeneID:819066 KEGG:ath:AT2G44580 Uniprot:F4IU60
Length = 386
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 218/392 (55%), Positives = 277/392 (70%)
Query: 11 AEAVLNLQQNSSISIAYHPLFGPNXXXXXXXXXXXXXXXXXYQRVSLRGQPDEDAVLCTQ 70
AEAV+NL+ S+ I+YHP FGP+ +QRV+LRG PDEDAVLCT+
Sbjct: 7 AEAVINLKSGYSLPISYHPCFGPHEDLLLLEADDKLVSDIFHQRVTLRGLPDEDAVLCTK 66
Query: 71 SKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVA 130
SKT+AIKFVG SNS+FLIPPS +++D N N SV+K+APGNMELVE +
Sbjct: 67 SKTYAIKFVGNSNSMFLIPPSIFPGDAQVSDT----NNN----VSVLKIAPGNMELVEAS 118
Query: 131 PRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAG-----LYTWNDLVDKVQASDDELRS 185
PR+DKLK +L NP+ + +G LYTW+DLV+ VQASD+ELR+
Sbjct: 119 PRLDKLKQILLANPFGAGEVEAMMDVDNDDLDHSGKKDLALYTWSDLVNTVQASDEELRN 178
Query: 186 GLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPI 245
GL +LSA+E+ G+WR++DE Y+ +L MLLHN VL DWS D L EDEVVN LV+D FP
Sbjct: 179 GLQSLSAIEIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFPSQ 238
Query: 246 LASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEG 305
LASHCLRV+GSKV+E WKL+ + VC+HFAR+IL + ++ESFMEEW++KIP+G
Sbjct: 239 LASHCLRVFGSKVNETDK----WKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPDG 294
Query: 306 MQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRD 365
M+ FE+LEGEVLTE++G++ + FSV SLP+ P ERFS+LF R KWEWKDL+PY+RD
Sbjct: 295 MEERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPEERFSVLFKHRSKWEWKDLEPYLRD 354
Query: 366 LKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
L VP S+EGLLLKYTRR QP DA PV+SAR
Sbjct: 355 LHVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 386
>UNIPROTKB|Q9BVC3 [details] [associations]
symbol:DSCC1 "Sister chromatid cohesion protein DCC1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0034088
"maintenance of mitotic sister chromatid cohesion" evidence=IMP]
[GO:0006275 "regulation of DNA replication" evidence=IMP]
[GO:0034421 "post-translational protein acetylation" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0000775 "chromosome,
centromeric region" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA] GO:GO:0005654
GO:GO:0000775 GO:GO:0006275 GO:GO:0003677 GO:GO:0006260
GO:GO:0000785 CTD:79075 eggNOG:NOG250437 HOGENOM:HOG000008115
HOVERGEN:HBG105358 KO:K11271 OrthoDB:EOG4N04F4 GO:GO:0034088
InterPro:IPR019128 Pfam:PF09724 EMBL:AY358866 EMBL:AK054585
EMBL:BC001316 EMBL:BC001531 IPI:IPI00299884 RefSeq:NP_076999.2
UniGene:Hs.315167 ProteinModelPortal:Q9BVC3 STRING:Q9BVC3
PhosphoSite:Q9BVC3 DMDM:167012058 PaxDb:Q9BVC3 PRIDE:Q9BVC3
DNASU:79075 Ensembl:ENST00000313655 GeneID:79075 KEGG:hsa:79075
UCSC:uc003yov.3 GeneCards:GC08M120846 HGNC:HGNC:24453 MIM:613203
neXtProt:NX_Q9BVC3 PharmGKB:PA162384079 InParanoid:Q9BVC3
OMA:FSLREKW GenomeRNAi:79075 NextBio:67873 Bgee:Q9BVC3
CleanEx:HS_DSCC1 Genevestigator:Q9BVC3 GO:GO:0034421 Uniprot:Q9BVC3
Length = 393
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 115/347 (33%), Positives = 174/347 (50%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
+RG DE AVLC++ KT+ +K TSN + IP C+ D ++ + I +
Sbjct: 64 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG------CKTPDQLKKEDSHCNIIHTE 117
Query: 117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
I N EL P++ KLK LL ENPY S + YT DL+D+
Sbjct: 118 IFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKD------SNSSKYTTEDLLDQ 171
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+QAS++E+ + L L+A ++GGYWRI++ Y + +L H + L D WS + +
Sbjct: 172 IQASEEEIMTQLQVLNACKIGGYWRILEFDYE---MKLLNHVTQLVDSESWSFGKVPLNT 228
Query: 233 VVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGRR-K 290
+ L P + HCL+ YG K VDE ++LD ++C AR +L + +
Sbjct: 229 CLQEL-GPLEPEEMIEHCLKCYGKKYVDEGE---VYFELDADKICRAAARMLLQNAVKFN 284
Query: 291 MESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGE 350
+ F E WQ+ +PEGM S + L+G L +R I V LP + ERF+ LF
Sbjct: 285 LAEFQEVWQQSVPEGMVTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSL 344
Query: 351 RPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
R KW +D+ PYI+DL Q++ LL KY+ + + VY++R
Sbjct: 345 REKWTEEDIAPYIQDLCGEKQTIGALLTKYSHSSMQ--NGVKVYNSR 389
>RGD|1561749 [details] [associations]
symbol:Dscc1 "defective in sister chromatid cohesion 1 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000775
"chromosome, centromeric region" evidence=IEA;ISO] [GO:0000785
"chromatin" evidence=IEA;ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO] [GO:0006275 "regulation of DNA replication"
evidence=IEA;ISO] [GO:0034088 "maintenance of mitotic sister
chromatid cohesion" evidence=IEA;ISO] [GO:0034421
"post-translational protein acetylation" evidence=IEA;ISO]
RGD:1561749 GO:GO:0005654 GO:GO:0000775 GO:GO:0006275 GO:GO:0000785
OrthoDB:EOG4N04F4 GO:GO:0034088 InterPro:IPR019128 Pfam:PF09724
OMA:FSLREKW GO:GO:0034421 GeneTree:ENSGT00390000017400
IPI:IPI00366412 Ensembl:ENSRNOT00000036399 UCSC:RGD:1561749
Uniprot:D4ACA3
Length = 399
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 115/350 (32%), Positives = 177/350 (50%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
+RG DE AVLC++ KT+ +K TSN + IP C+ D G+ + +
Sbjct: 70 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG------CKTPDQLKGEETQSNIVHTE 123
Query: 117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
I N EL P++ KLK LL EN Y +SK YT DL+++
Sbjct: 124 IFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSQKEEDPS---RSK---YTTEDLLNQ 177
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+QAS++E+ + L L+A E+GGYWRI++ Y + +L H + L D WS + +
Sbjct: 178 IQASEEEIMAQLQVLNACEIGGYWRILEFDYE---IKLLNHVTQLVDSESWSFNKV---- 230
Query: 233 VVNVLVSD-G--FPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGR 288
+NV + + G P + HCL+ YG K VD+ ++L+ +VC A +L +
Sbjct: 231 PLNVCLQELGPLEPEEMIEHCLKCYGKKYVDKGE---VYFELNADKVCRATAEMLLQNAV 287
Query: 289 R-KMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSIL 347
+ + F E WQ+ +PEGM + L+G L +R I F V +LP +RF+ L
Sbjct: 288 KFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRSSRPEIIFLFKVDALPEGTQDRFNSL 347
Query: 348 FGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
F R KW +D+ PYI+DL Q++ LL KY+R + + VY++R
Sbjct: 348 FSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSRSSMQ--NGVKVYNSR 395
>UNIPROTKB|F1MTU0 [details] [associations]
symbol:DSCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0034421 "post-translational protein acetylation"
evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=IEA] [GO:0006275 "regulation of DNA replication"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] GO:GO:0005654 GO:GO:0000775 GO:GO:0006275
GO:GO:0000785 GO:GO:0034088 InterPro:IPR019128 Pfam:PF09724
OMA:FSLREKW GO:GO:0034421 GeneTree:ENSGT00390000017400
EMBL:DAAA02039691 EMBL:DAAA02039692 IPI:IPI00701592
Ensembl:ENSBTAT00000020389 Uniprot:F1MTU0
Length = 394
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 111/346 (32%), Positives = 168/346 (48%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
+RG DE AVLC++ KT+ +K TSN + IP C+I + + + I +
Sbjct: 65 IRGDKDEQAVLCSEDKTYDLKVADTSNMLLFIPG------CKIPEQLKMEETHGNIIHTE 118
Query: 117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
I N EL P++ KLK LL EN Y SK YT DL+D+
Sbjct: 119 IFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSEKEKDSSH---SK---YTTEDLLDQ 172
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+QAS++E+ + L L+A E+GGYWRI++ Y + +L H + L D WS + +
Sbjct: 173 IQASEEEIMTQLQVLNACEIGGYWRILEFDYE---MKLLNHITQLVDSESWSFSKVPLNT 229
Query: 233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
+ L P + HCL+ YG K E + ++L ++C A+ +L + + +
Sbjct: 230 CLQEL-GPLEPEEMIEHCLKCYGKKYTEEGA--VYFELSADKICRATAQMLLQNAVKFNL 286
Query: 292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
F E WQ+ +PEGM + L+G L +R I LP ERF+ LF R
Sbjct: 287 AEFQEVWQQSVPEGMTTRLDQLKGLALVDRQSRPEIIFLLKAEDLPEGDQERFNSLFSLR 346
Query: 352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
KW +D+ PYI+DL Q++ LL KY R + + VY++R
Sbjct: 347 EKWTEEDIAPYIQDLCGEKQTIGALLTKYARSSMQ--NGVKVYNSR 390
>MGI|MGI:1919357 [details] [associations]
symbol:Dscc1 "defective in sister chromatid cohesion 1
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000775
"chromosome, centromeric region" evidence=ISO] [GO:0000785
"chromatin" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006275 "regulation
of DNA replication" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=ISO] [GO:0034421 "post-translational protein
acetylation" evidence=ISO] MGI:MGI:1919357 GO:GO:0005654
GO:GO:0000775 GO:GO:0006275 GO:GO:0003677 GO:GO:0006260
GO:GO:0000785 CTD:79075 eggNOG:NOG250437 HOGENOM:HOG000008115
HOVERGEN:HBG105358 KO:K11271 OrthoDB:EOG4N04F4 GO:GO:0034088
InterPro:IPR019128 Pfam:PF09724 GO:GO:0034421 EMBL:BC099382
EMBL:BC116833 EMBL:BC116835 IPI:IPI00123583 RefSeq:NP_898912.2
UniGene:Mm.486550 ProteinModelPortal:Q14AI0 STRING:Q14AI0
PhosphoSite:Q14AI0 PRIDE:Q14AI0 Ensembl:ENSMUST00000023059
GeneID:72107 KEGG:mmu:72107 UCSC:uc007vrw.1
GeneTree:ENSGT00390000017400 NextBio:335454 Bgee:Q14AI0
Genevestigator:Q14AI0 Uniprot:Q14AI0
Length = 399
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 112/347 (32%), Positives = 171/347 (49%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
+RG DE AVLC++ KT+ +K TSN + IP C+ D + + +
Sbjct: 70 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG------CKTPDQLKEEETPSAIVHTE 123
Query: 117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
I N EL P++ KLK LL EN Y +SK YT DL++
Sbjct: 124 IFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQKEEDAS---RSK---YTTEDLLNH 177
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+QAS++E+ + L L+A E+GGYWRI++ Y + +L H + L D WSLD +
Sbjct: 178 IQASEEEIMAQLQVLNACEIGGYWRILEFDYE---IKLLNHVTQLVDSESWSLDRVPLTV 234
Query: 233 VVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGRR-K 290
+ L P + HCL+ YG + VD++ ++LD ++C A +L + +
Sbjct: 235 CLQEL-GPLEPEEMIEHCLKCYGKRYVDKD---DVYFELDADKICRVTAEMLLQNAVKFN 290
Query: 291 MESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGE 350
+ F E WQ+ +PEGM + L+G L +R I V LP +RF+ LF
Sbjct: 291 LAEFQEVWQQSVPEGMTTRLDQLKGLALVDRNSRPEIIFLLKVDDLPEGTQDRFNSLFSL 350
Query: 351 RPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
R KW +D+ PYI+DL Q++ LL KY+R + + VY++R
Sbjct: 351 REKWTEEDITPYIQDLCGEKQTIGALLTKYSRSSMQ--NGIKVYNSR 395
>ZFIN|ZDB-GENE-040912-35 [details] [associations]
symbol:dscc1 "defective in sister chromatid cohesion
1 homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000785
"chromatin" evidence=ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISS] [GO:0034088 "maintenance of mitotic
sister chromatid cohesion" evidence=ISS] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] ZFIN:ZDB-GENE-040912-35 GO:GO:0005634 GO:GO:0006275
GO:GO:0003677 GO:GO:0006260 GO:GO:0000785 EMBL:BC081483
IPI:IPI00503599 RefSeq:NP_001004611.1 UniGene:Dr.90256
STRING:Q66I84 PRIDE:Q66I84 GeneID:447872 KEGG:dre:447872 CTD:79075
eggNOG:NOG250437 HOGENOM:HOG000008115 HOVERGEN:HBG105358
InParanoid:Q66I84 KO:K11271 OrthoDB:EOG4N04F4 NextBio:20832393
GO:GO:0034088 InterPro:IPR019128 Pfam:PF09724 Uniprot:Q66I84
Length = 391
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 108/344 (31%), Positives = 163/344 (47%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
+RG DE AVLC++ KT+ +K TSN + +P C+ D S + Q + +
Sbjct: 60 IRGDKDEHAVLCSEDKTYDLKIADTSNLLLFVPG------CKTPDQLSDIPASPQLMHTQ 113
Query: 117 I-KVAPGNMELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGL-YTWNDLVD 174
I + EL PR+ KLK LL ENPY + GL Y+ DL++
Sbjct: 114 IWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPPVGMQ-------EEAPGLKYSMEDLLE 166
Query: 175 KVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVV 234
++QAS +EL + L + A E+ G+WRI+D Y +L + WS + +
Sbjct: 167 RIQASKEELEAHLGNVHACEIDGFWRILDFDYEMKLLGHVTQLVDSESWSFSKVPLSVCL 226
Query: 235 NVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KMES 293
L S P + HCL YG + + ++ LDE +VC A+ +L + + +
Sbjct: 227 EELGSLE-PKAMIEHCLNCYGRR-HSDEDNQVMYALDEDKVCRATAQLLLQNAVKFNLSE 284
Query: 294 FMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPK 353
F E WQ+ +PEGM + L G L +R I V LP + ERF+ LF R K
Sbjct: 285 FQEVWQQSVPEGMGTRLDQLRGLALIDRSSKPETISLLRVEDLPEDTLERFNSLFSLREK 344
Query: 354 WEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
W D++PYI+DL Q+ LL K+ R + + VY++R
Sbjct: 345 WTQDDIEPYIQDLCGEKQTTGALLTKHARSSMQ--NGIKVYNSR 386
>UNIPROTKB|Q6GL75 [details] [associations]
symbol:dscc1 "Sister chromatid cohesion protein DCC1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISS] [GO:0034088 "maintenance of mitotic
sister chromatid cohesion" evidence=ISS] GO:GO:0005634
GO:GO:0006275 GO:GO:0003677 GO:GO:0006260 GO:GO:0000785 CTD:79075
eggNOG:NOG250437 HOGENOM:HOG000008115 HOVERGEN:HBG105358 KO:K11271
OrthoDB:EOG4N04F4 GO:GO:0034088 InterPro:IPR019128 Pfam:PF09724
EMBL:CR760288 EMBL:BC074630 RefSeq:NP_001004834.1 UniGene:Str.4502
STRING:Q6GL75 GeneID:448100 KEGG:xtr:448100 Xenbase:XB-GENE-5781750
InParanoid:Q6GL75 Bgee:Q6GL75 Uniprot:Q6GL75
Length = 391
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 102/331 (30%), Positives = 154/331 (46%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSI-AS 115
+RG + AVLC+Q KT+ +K TSN + IP C+ D + I
Sbjct: 61 IRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPG------CKTPDQLPADQQPLTIINCE 114
Query: 116 VIKVAPGNMELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
+ + EL P++ KLK LL EN Y+ L+T DL++
Sbjct: 115 IAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPENERESQDNS-------LHTTEDLLNM 167
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+QAS++EL L A+ A + G+WR++D Y + +L H + L D WS +
Sbjct: 168 IQASNEELVDHLKAIHACSINGFWRLLDFDYE---MKLLNHITQLIDSESWSFSKVPLPV 224
Query: 233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
+ L S P + HCL YG ++ + + + LDE ++C A +L + + +
Sbjct: 225 CLQELRSLE-PEEMIEHCLTCYGKRLIDEGTGGDFFALDEDKICRATALMLLQNAVKFNL 283
Query: 292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
F E WQ+ +PEGM + L+G L +R I LP + ERF+ LFG R
Sbjct: 284 AEFQEVWQQSVPEGMNTRLDQLKGLALVDRTSRPETIFLLKTEDLPEDTQERFNTLFGMR 343
Query: 352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTR 382
KW D+ PYI+DL Q++ LL KY R
Sbjct: 344 EKWAEADIAPYIKDLCGEKQTIGALLTKYAR 374
>UNIPROTKB|Q6GMB0 [details] [associations]
symbol:dscc1 "Sister chromatid cohesion protein DCC1"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=ISS]
[GO:0006275 "regulation of DNA replication" evidence=ISS]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=ISS] GO:GO:0005634 GO:GO:0006275 GO:GO:0003677
GO:GO:0006260 GO:GO:0000785 CTD:79075 HOVERGEN:HBG105358 KO:K11271
GO:GO:0034088 InterPro:IPR019128 Pfam:PF09724 EMBL:BC074160
RefSeq:NP_001086076.1 UniGene:Xl.10004 GeneID:444505
KEGG:xla:444505 Xenbase:XB-GENE-5781778 Uniprot:Q6GMB0
Length = 390
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 103/331 (31%), Positives = 153/331 (46%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSI-AS 115
+RG + AVLC+Q KT+ +K TSN + IP C++ D + I
Sbjct: 61 IRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPG------CKLPDQLPADQQPLSVIHCE 114
Query: 116 VIKVAPGNMELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
+ + EL P++ KLK LL EN Y+ + LYT DL+
Sbjct: 115 IAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPENESESS------QETSLYTTEDLLSV 168
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+Q+S +EL L A+ A + G WR++D Y + +L H + L D WS +
Sbjct: 169 IQSSTEELMDHLKAIHACNIKGIWRLLDFDYE---MKLLNHITQLIDSESWSFSKVPLQV 225
Query: 233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
+ L S P + HCL YG ++ E C + LDE ++C A +L + + +
Sbjct: 226 CLQELRSLE-PEEMIEHCLTCYGKRLMEEGG-DC-FALDEDKICRATALMLLQNAVKFNL 282
Query: 292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
F E WQ+ +P+GM + L+G L +R I LP + ERF+ LFG R
Sbjct: 283 AEFQEVWQQSVPDGMNTRLDQLKGLALVDRTSRPETIFLLQTEDLPEDTQERFNTLFGMR 342
Query: 352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTR 382
KW D+ PYI+DL Q++ LL KY R
Sbjct: 343 EKWTEADIAPYIQDLCGEKQTIGALLTKYAR 373
>UNIPROTKB|F1NKY0 [details] [associations]
symbol:DSCC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0006275 "regulation of DNA replication"
evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=IEA] [GO:0034421 "post-translational protein
acetylation" evidence=IEA] GO:GO:0005654 GO:GO:0000775
GO:GO:0006275 GO:GO:0000785 GO:GO:0034088 InterPro:IPR019128
Pfam:PF09724 OMA:FSLREKW GO:GO:0034421 GeneTree:ENSGT00390000017400
EMBL:AADN02022569 IPI:IPI00578722 Ensembl:ENSGALT00000026481
Uniprot:F1NKY0
Length = 391
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 103/346 (29%), Positives = 164/346 (47%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
+RG+ DE AVLC++ KT+ +K TSN + IP C ++ + + I S
Sbjct: 61 IRGEKDEQAVLCSKDKTYDVKIADTSNMLLFIPG------CRTPEELNADQASCNIIHSQ 114
Query: 117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
I N EL P++ KL+ LL E+PY SK YT DL+
Sbjct: 115 IAGFSNNYWELRRCRPKLKKLRKLLMEDPYEGPDSAKDQTSTV---SK---YTTEDLLSL 168
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+QAS++E+ L + A + GYWR+++ Y + +L H + L D W + +
Sbjct: 169 IQASEEEILHQLQVIGACVIEGYWRVLEFDYE---MKLLNHVTQLIDSESWPFNKVPLRT 225
Query: 233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
+ L P + H L YG K ++ + +++ E ++C A+ +L + + +
Sbjct: 226 CLEEL-GPLEPTEMIEHILSSYGRKYSDDAGE-VYFEMREDKICRAIAQMLLKNAVKFNL 283
Query: 292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
F E WQ+ +PEGM S + L+G L ++ I V LP + ERF+ LF R
Sbjct: 284 SEFHEVWQQSVPEGMSTSLDQLKGLALVDKASRPETIFLLKVEDLPEDNQERFNSLFSIR 343
Query: 352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
KW D+ PYI+DL Q++ LL KY R + + VY++R
Sbjct: 344 EKWTEVDITPYIQDLCAEKQTVGALLTKYARSS--VQNGIKVYNSR 387
>UNIPROTKB|F1S283 [details] [associations]
symbol:DSCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034421 "post-translational protein acetylation"
evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=IEA] [GO:0006275 "regulation of DNA replication"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] GO:GO:0005654 GO:GO:0000775 GO:GO:0006275
GO:GO:0000785 GO:GO:0034088 InterPro:IPR019128 Pfam:PF09724
OMA:FSLREKW GO:GO:0034421 GeneTree:ENSGT00390000017400
EMBL:CU326377 Ensembl:ENSSSCT00000006582 Uniprot:F1S283
Length = 362
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 102/314 (32%), Positives = 152/314 (48%)
Query: 57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
+RG DE AVLC++ KT+ +K TSN + +P C+ D + + I S
Sbjct: 68 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFLPD------CKTPDQLKMEETHCNIIHSE 121
Query: 117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
I N EL P++ KLK LL EN Y +SK YT DL+D+
Sbjct: 122 IFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSQKEKDSN---RSK---YTTEDLLDQ 175
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
+QAS++E+ + L L+A E+GGYWRI++ Y + +L H + L D WS + +
Sbjct: 176 IQASEEEIMAQLQVLNACEIGGYWRILEFDYE---MKLLNHVTQLVDSESWSFSKVPLNT 232
Query: 233 VVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGRR-K 290
+ L P + HCL YG K +DE ++L ++C A+ +L + +
Sbjct: 233 CLQEL-GPLEPEEMIEHCLNCYGKKYLDEGE---VYFELSADKICRATAQMLLQNAVKFN 288
Query: 291 MESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGE 350
+ F E WQ+ +PEGM + L+G L +R I V LP ERF+ LF
Sbjct: 289 LAEFQEVWQQSVPEGMITRLDQLKGLALVDRHSRPEIIFLLKVDDLPEENQERFNSLFSL 348
Query: 351 RPKWEWKDLQPYIR 364
R KW +D+ PYI+
Sbjct: 349 REKWTEEDIAPYIQ 362
>DICTYBASE|DDB_G0271400 [details] [associations]
symbol:dcc1 "sister chromatid cohesion protein Dcc1"
species:44689 "Dictyostelium discoideum" [GO:0034088 "maintenance
of mitotic sister chromatid cohesion" evidence=ISS] [GO:0006275
"regulation of DNA replication" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
dictyBase:DDB_G0271400 GO:GO:0005634 GO:GO:0006275 GO:GO:0003677
GO:GO:0006260 GO:GO:0000785 EMBL:AAFI02000006 eggNOG:NOG250437
KO:K11271 GO:GO:0034088 InterPro:IPR019128 Pfam:PF09724
RefSeq:XP_645707.1 EnsemblProtists:DDB0216809 GeneID:8617900
KEGG:ddi:DDB_G0271400 OMA:EQELRWD ProtClustDB:CLSZ2431341
Uniprot:Q55BA5
Length = 376
Score = 177 (67.4 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 53/220 (24%), Positives = 112/220 (50%)
Query: 117 IKVA-PGNMELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
IKVA ++EL E+ P+++ LK LL YS ++ G +++++++D+
Sbjct: 82 IKVALQYHLELTEIQPKLNVLKDLL----YSKAIDNSLDFEDD--ENLLG-FSFDEIIDR 134
Query: 176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVN 235
+Q+S+ E++ L L+ + + ++ E Y +L ++L + + W LD + D+ +
Sbjct: 135 IQSSEKEIQQYLLKLNTLIYKNRYIVLSENYEFKILELILSEATIGAWKLDNIPIDKCIE 194
Query: 236 VLVSDGFPPILASHCLRVY------------GSKV-----DENRSKSCLWKLDEKRVCVH 278
+ + P + HCL++Y G ++ D+N ++ + LD +VC+
Sbjct: 195 NIRA---PEFIIKHCLQLYSKQKSPTNSGGGGEEIKGGGGDDNNDEN-ICSLDFNKVCIF 250
Query: 279 FAREILSSGRR---KMESFMEEWQRKIPEGMQASFEILEG 315
A+++L+ + K E FM+ W+ +P +Q +F +L+G
Sbjct: 251 RAKQLLTLSNKSNMKFEDFMDNWKDTLPIEIQPNFSMLKG 290
Score = 167 (63.8 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 253 VYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR---KMESFMEEWQRKIPEGMQAS 309
+ G D+N ++ + LD +VC+ A+++L+ + K E FM+ W+ +P +Q +
Sbjct: 226 IKGGGGDDNNDEN-ICSLDFNKVCIFRAKQLLTLSNKSNMKFEDFMDNWKDTLPIEIQPN 284
Query: 310 FEILEG-EVLTERLGV---DLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRD 365
F +L+G +L + ++ + S LP P RF LF +W D++P+I+
Sbjct: 285 FSMLKGIAILIPSSSTNPKEKSVKFINESILPTIPKARFKELFQISTRWSIDDIEPFIKS 344
Query: 366 LKVPGQSLEGLLLKYTR 382
PG SLE +L Y+R
Sbjct: 345 TIPPGNSLEQFILTYSR 361
Score = 80 (33.2 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 53 QRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLI 88
+++ ++G ++AVLCT KTF I+ TSNS+ L+
Sbjct: 40 KKLVIKGSLTDEAVLCTDDKTFTIRAGHTSNSMLLV 75
>SGD|S000000521 [details] [associations]
symbol:DCC1 "Subunit of a Ctf18 RFC-like complex"
species:4932 "Saccharomyces cerevisiae" [GO:0003674
"molecular_function" evidence=ND] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0031390 "Ctf18 RFC-like complex" evidence=IPI]
[GO:0007064 "mitotic sister chromatid cohesion" evidence=IGI;IMP]
[GO:0035753 "maintenance of DNA trinucleotide repeats"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] SGD:S000000521 GO:GO:0006260 EMBL:X59720
EMBL:BK006937 GO:GO:0006974 GO:GO:0007064 GO:GO:0031390
GO:GO:0035753 eggNOG:NOG250437 KO:K11271 InterPro:IPR019128
Pfam:PF09724 GeneTree:ENSGT00390000017400 OrthoDB:EOG4XH387
PIR:S19342 RefSeq:NP_009913.2 ProteinModelPortal:P25559
DIP:DIP-2088N IntAct:P25559 MINT:MINT-480243 STRING:P25559
PaxDb:P25559 PeptideAtlas:P25559 EnsemblFungi:YCL016C GeneID:850344
KEGG:sce:YCL016C CYGD:YCL016c HOGENOM:HOG000057120 OMA:RQMNHSN
NextBio:965794 Genevestigator:P25559 GermOnline:YCL016C
Uniprot:P25559
Length = 380
Score = 145 (56.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 48/207 (23%), Positives = 93/207 (44%)
Query: 201 IVDERYMGTVLAMLLHNSVLNDWSLDAL-IED--EVVNVLVSDGFPPILASHCLRVYGS- 256
I+ + ++ L +LL +++ L L +ED V + D F P V
Sbjct: 179 ILSQDFLFKALHVLLMSAMAESLDLQHLNVEDTHHAVGKDIEDEFNPYTREIIETVLNKF 238
Query: 257 KVDENRSKSCLWKLDEKRVC----VHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEI 312
V E +++ W+L + + R+ +S ++ F+ +W+ P +I
Sbjct: 239 AVQEQEAENNTWRLRIPFIAQWYGIQALRKYVSGISMPIDEFLIKWKSLFPPFFPCDIDI 298
Query: 313 --LEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPG 370
L G D ++ + S+LP +P ERF +LF + +W+ +D++P I +L G
Sbjct: 299 DMLRGYHFKP---TDKTVQYIAKSTLPMDPKERFKVLFRLQSQWDLEDIKPLIEELNSRG 355
Query: 371 QSLEGLLLKYTRRTQPTLDAEPVYSAR 397
++ ++KY RR + L + V ++R
Sbjct: 356 MKIDSFIMKYARRKR--LGKKTVVTSR 380
Score = 48 (22.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 64 DAVLCTQSKTFAIKFVGTSNSVFLI 88
+ VLC+ KT+ +K SN+V L+
Sbjct: 48 EVVLCSHDKTWVLKQRKHSNTVLLM 72
>POMBASE|SPAC31A2.15c [details] [associations]
symbol:dcc1 "Ctf18 RFC-like complex subunit Dcc1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0031390 "Ctf18 RFC-like complex" evidence=TAS]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IMP]
[GO:0003689 "DNA clamp loader activity" evidence=TAS] GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006260 GO:GO:0051455 GO:GO:0031390 GO:GO:0007062
eggNOG:NOG250437 InterPro:IPR019128 Pfam:PF09724 PIR:T38613
RefSeq:NP_592927.2 STRING:Q09732 EnsemblFungi:SPAC31A2.15c.1
GeneID:2543078 OrthoDB:EOG4XH387 NextBio:20804106 Uniprot:Q09732
Length = 357
Score = 116 (45.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 292 ESFMEEWQRKIP---EGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILF 348
+ F++ W ++P +G+ S +L+G + I+ S LP P+ RF LF
Sbjct: 252 DEFIQLWDNRLPYPCKGLP-SLNLLKGYYFHDTPNT---IQYLSGDQLPREPSRRFQSLF 307
Query: 349 GERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRR 383
+ KW +++L +++DL + +E L+LKY R+
Sbjct: 308 QLKSKWLYEELWSFVKDLALSKSRVEALILKYGRK 342
Score = 62 (26.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 53 QRVSLRGQPDEDA-VLCTQSKTFAIKFVGTSNSVFL---IPPSD 92
+ + + D+ A VLCT KT+A++ V SNS L + P+D
Sbjct: 43 EEIVFKSDFDKKASVLCTSDKTYAVRQVVQSNSYLLFDELSPTD 86
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 397 367 0.00084 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 617 (66 KB)
Total size of DFA: 263 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.72u 0.10s 28.82t Elapsed: 00:00:02
Total cpu time: 28.72u 0.10s 28.82t Elapsed: 00:00:02
Start: Tue May 21 03:05:22 2013 End: Tue May 21 03:05:24 2013