Query 015968
Match_columns 397
No_of_seqs 338 out of 3219
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 02:35:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015968.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015968hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 1E-28 2.2E-33 246.0 31.6 269 100-371 163-474 (742)
2 KOG0569 Permease of the major 100.0 9.5E-28 2.1E-32 225.3 31.0 298 99-396 6-326 (485)
3 PRK10077 xylE D-xylose transpo 100.0 1.6E-26 3.6E-31 224.8 29.8 289 101-395 9-326 (479)
4 KOG0254 Predicted transporter 100.0 1.2E-26 2.7E-31 226.8 28.4 294 102-395 43-349 (513)
5 TIGR00887 2A0109 phosphate:H+ 100.0 1.3E-26 2.7E-31 226.5 25.9 274 100-376 12-322 (502)
6 COG2271 UhpC Sugar phosphate p 100.0 3.4E-27 7.3E-32 212.5 19.3 278 95-396 20-309 (448)
7 TIGR00879 SP MFS transporter, 100.0 8.2E-26 1.8E-30 219.3 28.5 294 99-395 23-339 (481)
8 COG2814 AraJ Arabinose efflux 99.9 8.1E-26 1.8E-30 206.2 25.4 253 103-396 12-268 (394)
9 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.3E-25 2.8E-30 213.8 25.4 183 102-286 6-194 (412)
10 PRK10642 proline/glycine betai 99.9 1.9E-24 4.2E-29 210.4 29.3 266 105-393 17-304 (490)
11 TIGR00891 2A0112 putative sial 99.9 5.8E-24 1.2E-28 202.2 29.0 187 100-288 8-195 (405)
12 PRK12307 putative sialic acid 99.9 5.8E-24 1.3E-28 203.8 27.5 266 104-394 18-285 (426)
13 TIGR00903 2A0129 major facilit 99.9 2.2E-24 4.8E-29 201.6 23.6 220 120-377 7-227 (368)
14 PRK11663 regulatory protein Uh 99.9 2.7E-24 5.9E-29 206.4 24.3 179 105-286 24-203 (434)
15 PRK14995 methyl viologen resis 99.9 7.1E-24 1.5E-28 206.7 26.9 181 102-285 4-186 (495)
16 PRK10213 nepI ribonucleoside t 99.9 1.6E-23 3.6E-28 198.2 28.4 231 122-395 38-272 (394)
17 PRK10406 alpha-ketoglutarate t 99.9 1.9E-23 4.1E-28 200.5 29.1 185 102-286 20-223 (432)
18 PRK11551 putative 3-hydroxyphe 99.9 1.5E-23 3.3E-28 199.6 28.3 185 100-287 11-196 (406)
19 PRK03545 putative arabinose tr 99.9 8.4E-24 1.8E-28 200.3 25.8 174 108-284 13-187 (390)
20 PRK15403 multidrug efflux syst 99.9 1.8E-23 3.9E-28 199.2 26.6 180 103-285 15-195 (413)
21 TIGR00895 2A0115 benzoate tran 99.9 1.5E-23 3.3E-28 198.6 25.7 288 102-395 15-305 (398)
22 KOG1330 Sugar transporter/spin 99.9 6.7E-26 1.5E-30 206.0 8.8 186 99-286 28-214 (493)
23 PRK09556 uhpT sugar phosphate 99.9 1.4E-24 3.1E-29 210.2 18.7 185 100-286 25-217 (467)
24 TIGR00898 2A0119 cation transp 99.9 3.7E-24 8.1E-29 209.6 20.2 222 125-352 110-337 (505)
25 TIGR00894 2A0114euk Na(+)-depe 99.9 8E-24 1.7E-28 205.1 21.3 276 98-394 13-316 (465)
26 PRK09705 cynX putative cyanate 99.9 5E-23 1.1E-27 195.0 26.2 250 102-395 8-260 (393)
27 PRK11273 glpT sn-glycerol-3-ph 99.9 7.3E-23 1.6E-27 197.5 25.4 182 102-287 27-214 (452)
28 PLN00028 nitrate transmembrane 99.9 2.6E-22 5.6E-27 194.6 27.6 168 112-282 44-219 (476)
29 TIGR00893 2A0114 d-galactonate 99.9 4E-23 8.6E-28 195.3 21.5 261 116-394 6-270 (399)
30 KOG2533 Permease of the major 99.9 1.5E-23 3.2E-28 199.6 18.1 280 100-396 41-330 (495)
31 PF00083 Sugar_tr: Sugar (and 99.9 7.6E-28 1.7E-32 232.4 -12.7 286 110-395 6-306 (451)
32 TIGR00711 efflux_EmrB drug res 99.9 1.4E-22 2.9E-27 197.6 23.1 178 105-285 3-181 (485)
33 PRK03699 putative transporter; 99.9 9.3E-22 2E-26 186.5 27.3 173 105-279 8-180 (394)
34 PRK15075 citrate-proton sympor 99.9 8.5E-22 1.8E-26 189.1 27.2 164 105-270 16-200 (434)
35 PRK10091 MFS transport protein 99.9 6.2E-22 1.4E-26 186.9 25.7 173 109-284 8-181 (382)
36 TIGR00890 2A0111 Oxalate/Forma 99.9 2.2E-22 4.8E-27 189.2 22.1 159 122-284 21-180 (377)
37 TIGR00710 efflux_Bcr_CflA drug 99.9 6.4E-22 1.4E-26 186.9 24.7 169 114-285 15-184 (385)
38 PRK15402 multidrug efflux syst 99.9 1.1E-21 2.4E-26 186.9 25.6 184 99-285 8-192 (406)
39 PRK03893 putative sialic acid 99.9 2.8E-21 6E-26 189.0 28.7 184 101-287 17-200 (496)
40 PRK09952 shikimate transporter 99.9 2.7E-21 5.9E-26 185.7 27.8 181 104-287 22-225 (438)
41 TIGR00712 glpT glycerol-3-phos 99.9 7.9E-22 1.7E-26 189.6 23.8 274 102-395 25-307 (438)
42 KOG2532 Permease of the major 99.9 1.5E-21 3.2E-26 185.6 24.5 236 132-391 66-310 (466)
43 PRK11043 putative transporter; 99.9 2.5E-21 5.4E-26 184.1 26.2 166 116-284 18-183 (401)
44 TIGR00881 2A0104 phosphoglycer 99.9 7.5E-23 1.6E-27 192.5 15.4 262 114-394 5-271 (379)
45 KOG0255 Synaptic vesicle trans 99.9 7E-22 1.5E-26 194.2 22.0 204 132-341 111-321 (521)
46 PF07690 MFS_1: Major Facilita 99.9 5.5E-22 1.2E-26 184.9 20.1 171 111-284 3-175 (352)
47 TIGR00806 rfc RFC reduced fola 99.9 8.7E-22 1.9E-26 182.7 20.4 255 107-372 30-292 (511)
48 TIGR00805 oat sodium-independe 99.9 3.5E-22 7.5E-27 198.6 18.8 176 107-284 36-283 (633)
49 TIGR00900 2A0121 H+ Antiporter 99.9 1.9E-21 4.1E-26 182.1 22.0 165 112-279 7-176 (365)
50 TIGR00886 2A0108 nitrite extru 99.9 4.6E-21 9.9E-26 179.9 24.2 171 112-285 9-192 (366)
51 PRK11652 emrD multidrug resist 99.9 9.2E-21 2E-25 179.8 26.2 166 117-285 21-187 (394)
52 PRK10473 multidrug efflux syst 99.9 1.3E-20 2.7E-25 178.7 25.3 165 118-285 17-182 (392)
53 PRK10133 L-fucose transporter; 99.9 2.2E-20 4.8E-25 179.0 26.9 147 105-253 27-176 (438)
54 PRK15034 nitrate/nitrite trans 99.9 1.9E-20 4.2E-25 176.9 25.8 220 108-371 38-281 (462)
55 TIGR00892 2A0113 monocarboxyla 99.9 6.2E-21 1.3E-25 184.0 22.1 175 103-281 18-193 (455)
56 PRK03633 putative MFS family t 99.9 5.7E-20 1.2E-24 173.5 27.4 148 107-256 9-156 (381)
57 PRK10504 putative transporter; 99.9 3.9E-20 8.5E-25 179.7 26.4 174 108-284 14-188 (471)
58 PRK11102 bicyclomycin/multidru 99.9 1.2E-20 2.6E-25 177.9 20.9 163 120-285 7-170 (377)
59 TIGR00885 fucP L-fucose:H+ sym 99.9 6.9E-20 1.5E-24 174.1 24.9 171 106-278 5-203 (410)
60 PRK05122 major facilitator sup 99.9 6E-20 1.3E-24 174.5 24.5 164 110-276 21-193 (399)
61 PRK11195 lysophospholipid tran 99.9 5.2E-20 1.1E-24 174.3 23.8 155 124-285 23-177 (393)
62 PRK12382 putative transporter; 99.9 1.5E-19 3.2E-24 171.5 26.9 151 119-272 30-189 (392)
63 TIGR00896 CynX cyanate transpo 99.9 6.1E-20 1.3E-24 171.7 22.6 233 121-395 17-252 (355)
64 KOG0253 Synaptic vesicle trans 99.9 9.6E-20 2.1E-24 160.8 22.1 260 105-370 79-354 (528)
65 TIGR00897 2A0118 polyol permea 99.9 1.7E-19 3.7E-24 171.5 23.8 234 126-394 35-276 (402)
66 PRK10489 enterobactin exporter 99.8 1.3E-19 2.7E-24 173.3 20.3 163 120-285 33-200 (417)
67 PRK11646 multidrug resistance 99.8 1.2E-18 2.6E-23 165.4 25.8 154 126-283 33-187 (400)
68 TIGR00899 2A0120 sugar efflux 99.8 1.5E-18 3.2E-23 163.4 24.1 171 113-286 6-181 (375)
69 cd06174 MFS The Major Facilita 99.8 9.1E-19 2E-23 162.8 22.3 167 110-279 5-171 (352)
70 TIGR00883 2A0106 metabolite-pr 99.8 2.2E-18 4.8E-23 163.0 24.8 170 115-286 4-195 (394)
71 KOG0252 Inorganic phosphate tr 99.8 2.7E-19 5.9E-24 162.6 15.5 272 99-377 36-339 (538)
72 PRK09874 drug efflux system pr 99.8 4.7E-18 1E-22 161.9 25.1 173 110-284 20-196 (408)
73 PRK10054 putative transporter; 99.8 2.5E-18 5.4E-23 163.0 21.7 155 126-284 30-185 (395)
74 COG2223 NarK Nitrate/nitrite t 99.8 2.6E-18 5.7E-23 155.5 20.3 217 119-377 29-254 (417)
75 PRK11010 ampG muropeptide tran 99.8 1.1E-17 2.4E-22 162.6 25.8 177 102-285 13-198 (491)
76 TIGR00902 2A0127 phenyl propri 99.8 1.3E-17 2.9E-22 157.4 23.6 227 111-377 11-240 (382)
77 KOG2504 Monocarboxylate transp 99.8 1.4E-18 2.9E-23 167.4 16.9 286 103-396 45-354 (509)
78 TIGR00901 2A0125 AmpG-related 99.8 9.7E-18 2.1E-22 156.9 22.0 159 121-284 5-181 (356)
79 PRK06814 acylglycerophosphoeth 99.8 7E-18 1.5E-22 180.7 23.2 222 143-395 54-281 (1140)
80 PRK08633 2-acyl-glycerophospho 99.8 2.1E-17 4.6E-22 177.4 26.6 162 125-286 31-204 (1146)
81 PRK11902 ampG muropeptide tran 99.8 6.2E-17 1.4E-21 153.9 25.2 170 112-285 7-185 (402)
82 PTZ00207 hypothetical protein; 99.8 9.1E-17 2E-21 156.2 26.3 169 102-278 26-201 (591)
83 PRK11128 putative 3-phenylprop 99.8 4.9E-17 1.1E-21 153.6 23.8 219 118-377 18-240 (382)
84 KOG2615 Permease of the major 99.8 2.9E-18 6.2E-23 152.4 12.7 144 141-285 68-217 (451)
85 COG2807 CynX Cyanate permease 99.8 1.8E-16 3.8E-21 140.8 23.9 251 103-395 11-263 (395)
86 PF06609 TRI12: Fungal trichot 99.8 1.1E-17 2.5E-22 161.5 17.9 172 101-277 41-212 (599)
87 PRK10642 proline/glycine betai 99.8 1.3E-17 2.7E-22 162.7 18.4 180 125-306 272-459 (490)
88 COG0738 FucP Fucose permease [ 99.8 2E-16 4.2E-21 142.6 24.3 250 107-394 16-291 (422)
89 PRK10207 dipeptide/tripeptide 99.8 2.4E-17 5.3E-22 159.6 18.7 154 124-280 35-192 (489)
90 PRK15011 sugar efflux transpor 99.7 7.9E-16 1.7E-20 145.9 26.2 156 126-285 38-198 (393)
91 TIGR00882 2A0105 oligosacchari 99.7 1.3E-15 2.9E-20 144.6 24.6 158 121-284 19-186 (396)
92 TIGR00924 yjdL_sub1_fam amino 99.7 1.7E-16 3.7E-21 153.6 18.3 151 126-279 33-189 (475)
93 KOG3764 Vesicular amine transp 99.7 6.3E-17 1.4E-21 144.8 10.0 151 130-281 95-246 (464)
94 PRK09528 lacY galactoside perm 99.7 3.8E-15 8.2E-20 142.6 22.5 153 124-282 31-191 (420)
95 PRK09584 tppB putative tripept 99.7 3.9E-15 8.5E-20 145.0 19.9 149 124-275 42-194 (500)
96 PRK15462 dipeptide/tripeptide 99.6 1.1E-14 2.5E-19 139.3 18.5 150 125-277 31-184 (493)
97 TIGR00889 2A0110 nucleoside tr 99.6 4.6E-14 1E-18 134.7 22.7 152 124-285 23-183 (418)
98 TIGR01299 synapt_SV2 synaptic 99.6 1.5E-14 3.2E-19 145.0 19.0 140 145-286 599-738 (742)
99 PF05977 MFS_3: Transmembrane 99.6 8E-14 1.7E-18 135.2 23.1 257 97-395 10-274 (524)
100 PRK15011 sugar efflux transpor 99.6 4.8E-14 1E-18 133.7 21.2 154 126-283 239-392 (393)
101 TIGR00880 2_A_01_02 Multidrug 99.6 3.7E-15 8E-20 119.3 11.1 136 147-283 4-140 (141)
102 TIGR01301 GPH_sucrose GPH fami 99.6 7.9E-14 1.7E-18 133.1 21.8 164 120-285 20-222 (477)
103 TIGR02718 sider_RhtX_FptX side 99.6 2.1E-13 4.5E-18 129.3 24.4 174 107-283 4-185 (390)
104 PRK11551 putative 3-hydroxyphe 99.6 5.4E-14 1.2E-18 134.0 18.2 154 126-281 242-395 (406)
105 TIGR00792 gph sugar (Glycoside 99.6 1E-13 2.3E-18 133.3 18.6 158 125-284 21-197 (437)
106 KOG3626 Organic anion transpor 99.6 2.3E-14 5E-19 139.6 13.9 259 103-377 96-428 (735)
107 PRK09528 lacY galactoside perm 99.6 2.9E-14 6.3E-19 136.5 13.6 147 135-284 258-406 (420)
108 TIGR00889 2A0110 nucleoside tr 99.6 5.7E-14 1.2E-18 134.1 14.9 141 144-284 254-405 (418)
109 TIGR00890 2A0111 Oxalate/Forma 99.5 1.5E-13 3.2E-18 129.2 16.4 147 126-275 227-375 (377)
110 TIGR00899 2A0120 sugar efflux 99.5 5.9E-13 1.3E-17 125.3 19.7 154 126-283 222-375 (375)
111 cd06174 MFS The Major Facilita 99.5 4.3E-13 9.2E-18 124.6 18.3 155 124-281 195-351 (352)
112 PRK05122 major facilitator sup 99.5 4.2E-13 9.2E-18 127.5 18.5 153 127-284 239-391 (399)
113 PRK09952 shikimate transporter 99.5 5.3E-13 1.1E-17 128.4 18.4 158 125-284 272-435 (438)
114 KOG2563 Permease of the major 99.5 3.9E-12 8.5E-17 116.4 22.2 267 97-396 38-322 (480)
115 PF03137 OATP: Organic Anion T 99.5 1.6E-15 3.6E-20 147.3 -0.7 258 110-377 9-341 (539)
116 PRK09556 uhpT sugar phosphate 99.5 7.7E-13 1.7E-17 128.4 17.4 152 126-279 281-446 (467)
117 TIGR00892 2A0113 monocarboxyla 99.5 2.5E-13 5.4E-18 131.2 13.9 150 126-277 263-416 (455)
118 PRK12382 putative transporter; 99.5 1.1E-12 2.4E-17 124.4 17.7 149 126-279 238-386 (392)
119 TIGR00883 2A0106 metabolite-pr 99.5 6.4E-13 1.4E-17 125.6 15.2 145 126-272 242-391 (394)
120 TIGR00902 2A0127 phenyl propri 99.5 3.2E-12 6.9E-17 120.8 19.2 148 126-278 227-375 (382)
121 PRK03699 putative transporter; 99.5 2.3E-12 5.1E-17 122.2 18.1 155 124-282 226-380 (394)
122 TIGR00788 fbt folate/biopterin 99.5 2.4E-12 5.2E-17 124.5 17.9 167 114-285 36-212 (468)
123 TIGR00893 2A0114 d-galactonate 99.5 2.5E-12 5.4E-17 121.4 17.5 149 126-278 238-395 (399)
124 PRK03893 putative sialic acid 99.4 1E-12 2.2E-17 128.6 13.9 143 126-271 297-442 (496)
125 KOG2325 Predicted transporter/ 99.4 1.2E-11 2.5E-16 116.3 19.8 180 106-286 36-234 (488)
126 PRK03545 putative arabinose tr 99.4 1.1E-11 2.5E-16 117.4 20.0 150 125-279 227-377 (390)
127 PRK09874 drug efflux system pr 99.4 3.2E-12 6.9E-17 121.8 16.0 135 144-279 261-395 (408)
128 TIGR00879 SP MFS transporter, 99.4 3.3E-12 7E-17 123.9 15.5 161 122-285 302-474 (481)
129 TIGR00891 2A0112 putative sial 99.4 2.5E-12 5.3E-17 122.2 14.1 139 125-266 260-400 (405)
130 PRK10489 enterobactin exporter 99.4 6.6E-12 1.4E-16 120.1 16.5 157 126-285 245-403 (417)
131 PRK09705 cynX putative cyanate 99.4 2.4E-11 5.1E-16 115.3 19.4 157 126-286 227-386 (393)
132 PRK11273 glpT sn-glycerol-3-ph 99.4 1.2E-11 2.5E-16 119.7 17.4 152 125-279 275-432 (452)
133 PRK03633 putative MFS family t 99.4 1.4E-11 3E-16 116.4 17.7 148 126-279 222-369 (381)
134 PRK10077 xylE D-xylose transpo 99.4 2.1E-11 4.6E-16 118.8 19.2 159 124-285 291-461 (479)
135 PF03825 Nuc_H_symport: Nucleo 99.4 1.4E-10 3E-15 109.4 23.7 223 118-377 16-243 (400)
136 TIGR00897 2A0118 polyol permea 99.4 3E-11 6.5E-16 115.0 18.9 150 126-280 244-399 (402)
137 PF11700 ATG22: Vacuole efflux 99.4 2.4E-11 5.2E-16 116.8 18.1 170 112-284 291-470 (477)
138 TIGR00887 2A0109 phosphate:H+ 99.4 1.5E-11 3.2E-16 120.5 16.2 161 126-286 310-493 (502)
139 PRK09669 putative symporter Ya 99.4 3E-11 6.5E-16 116.5 17.8 153 124-278 30-200 (444)
140 PLN00028 nitrate transmembrane 99.4 2.2E-11 4.7E-16 118.4 16.7 152 126-282 275-433 (476)
141 PF13347 MFS_2: MFS/sugar tran 99.4 2.9E-11 6.2E-16 116.1 17.0 157 125-283 23-200 (428)
142 PRK12307 putative sialic acid 99.3 7.4E-11 1.6E-15 113.1 18.4 138 126-266 253-392 (426)
143 PRK11663 regulatory protein Uh 99.3 3E-11 6.6E-16 116.1 15.6 151 126-279 266-421 (434)
144 PRK11010 ampG muropeptide tran 99.3 6.8E-11 1.5E-15 115.2 18.1 156 125-283 244-404 (491)
145 PRK10406 alpha-ketoglutarate t 99.3 1E-10 2.2E-15 112.5 18.4 155 124-281 264-423 (432)
146 TIGR00882 2A0105 oligosacchari 99.3 4.6E-11 1E-15 113.5 15.9 133 144-277 257-390 (396)
147 TIGR00895 2A0115 benzoate tran 99.3 7E-11 1.5E-15 111.8 16.7 128 124-253 270-397 (398)
148 PRK11128 putative 3-phenylprop 99.3 1.6E-10 3.4E-15 109.3 18.8 144 128-276 229-373 (382)
149 PRK10429 melibiose:sodium symp 99.3 2.2E-10 4.7E-15 111.4 20.1 157 126-284 29-204 (473)
150 PRK10504 putative transporter; 99.3 1.6E-10 3.5E-15 112.3 18.4 130 124-255 281-414 (471)
151 COG3104 PTR2 Dipeptide/tripept 99.3 4.7E-11 1E-15 111.3 13.1 153 126-281 44-205 (498)
152 COG2814 AraJ Arabinose efflux 99.3 2.4E-10 5.2E-15 105.2 17.1 155 121-280 229-384 (394)
153 COG2270 Permeases of the major 99.3 9.5E-11 2.1E-15 106.9 14.0 178 104-284 254-431 (438)
154 PRK15075 citrate-proton sympor 99.3 3.5E-10 7.6E-15 108.8 18.8 132 126-260 261-397 (434)
155 PF05631 DUF791: Protein of un 99.3 4.5E-10 9.8E-15 101.1 17.9 156 126-284 56-219 (354)
156 TIGR00898 2A0119 cation transp 99.3 9.9E-11 2.1E-15 114.9 15.1 136 147-285 361-498 (505)
157 PRK11462 putative transporter; 99.3 1.1E-09 2.5E-14 105.8 22.0 152 125-278 31-200 (460)
158 TIGR00900 2A0121 H+ Antiporter 99.3 6.4E-11 1.4E-15 110.7 12.9 129 126-256 233-363 (365)
159 TIGR00712 glpT glycerol-3-phos 99.3 6E-11 1.3E-15 114.2 12.7 158 124-284 272-436 (438)
160 PF05977 MFS_3: Transmembrane 99.3 3.2E-10 7E-15 110.2 17.7 149 126-277 240-389 (524)
161 TIGR01272 gluP glucose/galacto 99.2 5.7E-10 1.2E-14 102.0 17.9 145 120-270 157-303 (310)
162 PRK08633 2-acyl-glycerophospho 99.2 3.2E-10 6.9E-15 122.2 18.5 146 126-273 255-401 (1146)
163 TIGR00881 2A0104 phosphoglycer 99.2 1E-10 2.2E-15 109.9 12.3 136 126-264 239-379 (379)
164 PF06813 Nodulin-like: Nodulin 99.2 4.7E-10 1E-14 97.7 15.2 176 103-284 2-184 (250)
165 KOG2504 Monocarboxylate transp 99.2 2.3E-10 4.9E-15 110.7 14.5 161 120-282 314-476 (509)
166 PRK10091 MFS transport protein 99.2 8.8E-10 1.9E-14 104.1 18.2 149 125-277 221-371 (382)
167 COG2271 UhpC Sugar phosphate p 99.2 1.5E-10 3.3E-15 105.5 12.0 154 122-278 271-430 (448)
168 TIGR02332 HpaX 4-hydroxyphenyl 99.2 4.3E-10 9.4E-15 107.3 15.8 145 125-271 263-410 (412)
169 TIGR02718 sider_RhtX_FptX side 99.2 1.3E-09 2.8E-14 103.4 18.7 147 128-277 232-386 (390)
170 PRK10213 nepI ribonucleoside t 99.2 2E-09 4.3E-14 102.2 19.8 147 126-276 239-385 (394)
171 PRK10054 putative transporter; 99.2 3.1E-10 6.8E-15 107.7 14.2 141 133-277 238-379 (395)
172 KOG0569 Permease of the major 99.2 1.3E-09 2.8E-14 103.5 17.4 161 122-286 288-459 (485)
173 PF01770 Folate_carrier: Reduc 99.2 1.4E-09 3E-14 100.6 17.2 264 105-372 6-277 (412)
174 TIGR00792 gph sugar (Glycoside 99.2 6.1E-10 1.3E-14 107.1 15.4 112 144-255 260-379 (437)
175 KOG0253 Synaptic vesicle trans 99.2 1.7E-10 3.7E-15 102.9 10.0 131 152-285 392-522 (528)
176 PRK15402 multidrug efflux syst 99.2 3E-09 6.6E-14 101.3 19.4 143 128-274 240-387 (406)
177 TIGR00894 2A0114euk Na(+)-depe 99.2 1.1E-09 2.4E-14 106.4 16.3 153 126-281 284-449 (465)
178 PRK06814 acylglycerophosphoeth 99.1 1.1E-09 2.5E-14 117.8 17.6 146 126-273 248-413 (1140)
179 KOG4686 Predicted sugar transp 99.1 5.1E-11 1.1E-15 102.5 5.7 154 99-254 39-196 (459)
180 COG2223 NarK Nitrate/nitrite t 99.1 9.3E-10 2E-14 100.5 12.8 164 106-278 223-397 (417)
181 TIGR00710 efflux_Bcr_CflA drug 99.1 1.1E-08 2.4E-13 96.5 20.9 136 127-267 230-371 (385)
182 PRK11902 ampG muropeptide tran 99.1 4.7E-09 1E-13 99.9 18.2 146 126-278 232-386 (402)
183 TIGR00903 2A0129 major facilit 99.1 7.6E-09 1.7E-13 97.0 18.1 150 126-284 214-367 (368)
184 TIGR00896 CynX cyanate transpo 99.1 3.3E-09 7.1E-14 99.2 15.4 133 126-261 219-353 (355)
185 PF01306 LacY_symp: LacY proto 99.1 2.6E-09 5.7E-14 99.4 14.0 155 120-280 23-186 (412)
186 PRK11646 multidrug resistance 99.1 3.9E-09 8.4E-14 100.4 15.7 150 126-277 230-383 (400)
187 TIGR00711 efflux_EmrB drug res 99.1 4.8E-09 1E-13 102.4 16.6 129 126-256 278-410 (485)
188 PF03825 Nuc_H_symport: Nucleo 99.1 1.6E-08 3.5E-13 95.4 18.9 156 126-284 229-398 (400)
189 KOG4686 Predicted sugar transp 99.0 4E-09 8.8E-14 91.0 12.9 150 126-279 287-440 (459)
190 PF01306 LacY_symp: LacY proto 99.0 9.7E-10 2.1E-14 102.2 9.6 140 143-283 261-402 (412)
191 PRK10133 L-fucose transporter; 99.0 8.2E-09 1.8E-13 99.2 16.4 146 126-277 281-428 (438)
192 PRK09848 glucuronide transport 99.0 4E-08 8.7E-13 94.9 21.1 126 126-253 31-174 (448)
193 PF11700 ATG22: Vacuole efflux 99.0 1.6E-07 3.4E-12 90.6 24.8 227 142-395 71-337 (477)
194 PRK11195 lysophospholipid tran 99.0 1.9E-08 4.1E-13 95.4 18.1 141 127-270 229-370 (393)
195 TIGR01272 gluP glucose/galacto 99.0 7.8E-09 1.7E-13 94.5 14.9 92 189-280 5-111 (310)
196 PRK09848 glucuronide transport 99.0 8.7E-09 1.9E-13 99.5 15.4 123 130-254 255-386 (448)
197 TIGR00901 2A0125 AmpG-related 99.0 9.7E-09 2.1E-13 96.0 15.1 113 126-240 231-355 (356)
198 PRK14995 methyl viologen resis 99.0 1.5E-08 3.2E-13 99.2 16.7 127 126-254 282-411 (495)
199 PF13347 MFS_2: MFS/sugar tran 99.0 1.5E-08 3.3E-13 97.3 15.1 128 124-254 245-382 (428)
200 PF07690 MFS_1: Major Facilita 99.0 5.1E-09 1.1E-13 97.4 11.5 122 124-247 226-352 (352)
201 PRK15034 nitrate/nitrite trans 99.0 1.7E-08 3.6E-13 96.2 14.8 133 147-279 292-451 (462)
202 PRK11102 bicyclomycin/multidru 99.0 1E-07 2.3E-12 89.7 20.3 124 126-252 217-345 (377)
203 COG0477 ProP Permeases of the 99.0 3.9E-08 8.5E-13 89.0 16.8 155 118-274 16-177 (338)
204 COG2211 MelB Na+/melibiose sym 98.9 1.6E-07 3.5E-12 88.5 20.1 153 126-280 35-205 (467)
205 PRK10429 melibiose:sodium symp 98.9 2.8E-08 6E-13 96.7 15.1 127 126-254 253-391 (473)
206 PRK10473 multidrug efflux syst 98.9 2.8E-08 6E-13 94.3 14.4 120 128-251 228-348 (392)
207 PF03209 PUCC: PUCC protein; 98.9 2.7E-07 5.8E-12 84.8 19.1 129 130-261 6-156 (403)
208 PRK11043 putative transporter; 98.9 5.3E-07 1.1E-11 85.8 21.4 128 126-256 225-357 (401)
209 PRK09669 putative symporter Ya 98.8 6.5E-08 1.4E-12 93.4 14.9 112 144-255 267-387 (444)
210 COG2807 CynX Cyanate permease 98.8 5.3E-07 1.1E-11 81.1 18.5 173 100-279 208-382 (395)
211 TIGR00924 yjdL_sub1_fam amino 98.8 2.8E-07 6E-12 89.6 18.4 134 144-278 315-464 (475)
212 KOG2816 Predicted transporter 98.8 7.3E-08 1.6E-12 92.0 13.2 175 105-286 23-204 (463)
213 TIGR00926 2A1704 Peptide:H+ sy 98.8 1.5E-06 3.4E-11 86.7 22.4 154 124-279 8-179 (654)
214 TIGR00885 fucP L-fucose:H+ sym 98.8 3E-07 6.5E-12 87.6 16.5 128 144-274 272-404 (410)
215 KOG0252 Inorganic phosphate tr 98.8 1.2E-08 2.5E-13 94.1 6.4 181 106-286 306-502 (538)
216 PRK09584 tppB putative tripept 98.8 3.3E-07 7.1E-12 89.6 17.0 134 144-277 319-474 (500)
217 PF03092 BT1: BT1 family; Int 98.8 2E-07 4.4E-12 89.2 15.1 153 126-282 12-175 (433)
218 KOG3762 Predicted transporter 98.7 3.1E-08 6.7E-13 93.0 8.1 162 116-280 383-545 (618)
219 COG2270 Permeases of the major 98.7 3.3E-06 7.2E-11 77.7 20.2 229 139-396 56-309 (438)
220 PRK11652 emrD multidrug resist 98.7 2.2E-06 4.7E-11 81.4 20.2 126 128-256 232-360 (394)
221 KOG2532 Permease of the major 98.7 1.9E-07 4.2E-12 89.5 12.3 153 125-281 280-446 (466)
222 TIGR00886 2A0108 nitrite extru 98.7 1.7E-07 3.8E-12 87.8 10.9 114 126-242 248-365 (366)
223 COG2211 MelB Na+/melibiose sym 98.6 1.2E-06 2.6E-11 82.7 16.0 130 124-254 256-394 (467)
224 PF00083 Sugar_tr: Sugar (and 98.6 1.8E-10 3.9E-15 111.4 -10.7 158 124-286 273-441 (451)
225 TIGR00788 fbt folate/biopterin 98.6 2E-07 4.3E-12 90.4 9.0 149 132-283 281-447 (468)
226 PF06779 DUF1228: Protein of u 98.6 5.8E-07 1.3E-11 63.7 8.5 79 117-197 5-83 (85)
227 PRK11462 putative transporter; 98.5 7.3E-06 1.6E-10 79.4 18.9 111 144-254 266-385 (460)
228 PRK10207 dipeptide/tripeptide 98.5 3.6E-06 7.8E-11 82.0 16.5 135 144-278 312-472 (489)
229 KOG3764 Vesicular amine transp 98.5 2.7E-07 5.9E-12 83.7 7.9 146 129-277 296-449 (464)
230 PF06609 TRI12: Fungal trichot 98.5 1.9E-06 4E-11 84.3 14.3 145 144-288 352-560 (599)
231 KOG0254 Predicted transporter 98.5 5.7E-06 1.2E-10 81.4 16.5 163 120-286 311-488 (513)
232 PF03209 PUCC: PUCC protein; 98.5 1.2E-05 2.5E-10 74.2 16.5 151 126-278 231-394 (403)
233 COG0738 FucP Fucose permease [ 98.4 5.8E-06 1.2E-10 75.6 13.8 146 120-271 253-398 (422)
234 PF05978 UNC-93: Ion channel r 98.4 9E-06 2E-10 65.6 13.4 108 145-253 41-148 (156)
235 TIGR00769 AAA ADP/ATP carrier 98.4 0.00019 4.1E-09 68.9 24.5 127 126-254 25-189 (472)
236 PRK15403 multidrug efflux syst 98.3 8E-05 1.7E-09 71.2 18.6 141 126-271 240-386 (413)
237 KOG2533 Permease of the major 98.3 8.8E-06 1.9E-10 78.5 11.7 156 112-269 281-443 (495)
238 TIGR01301 GPH_sucrose GPH fami 98.2 8.2E-05 1.8E-09 71.7 15.8 141 145-285 309-475 (477)
239 KOG0255 Synaptic vesicle trans 98.2 8.3E-05 1.8E-09 73.4 16.3 154 126-286 340-497 (521)
240 KOG0637 Sucrose transporter an 98.1 1.6E-05 3.4E-10 73.8 9.4 125 126-252 54-201 (498)
241 PF12832 MFS_1_like: MFS_1 lik 98.1 1.9E-05 4.2E-10 55.5 7.7 62 118-181 14-75 (77)
242 PTZ00207 hypothetical protein; 98.1 4.3E-05 9.3E-10 75.3 12.6 153 126-280 375-550 (591)
243 PRK15462 dipeptide/tripeptide 98.0 0.00048 1E-08 66.7 17.3 131 144-274 311-469 (493)
244 KOG2615 Permease of the major 97.9 0.00013 2.8E-09 66.4 10.8 122 132-255 290-413 (451)
245 KOG3098 Uncharacterized conser 97.9 0.0018 3.8E-08 61.6 18.8 106 147-253 56-161 (461)
246 PF02487 CLN3: CLN3 protein; 97.8 0.00039 8.5E-09 64.9 12.8 131 145-280 63-193 (402)
247 KOG2816 Predicted transporter 97.8 0.00028 6.1E-09 67.7 11.4 124 128-254 266-390 (463)
248 COG3202 ATP/ADP translocase [E 97.7 0.014 2.9E-07 55.4 20.5 131 126-256 45-210 (509)
249 PF06963 FPN1: Ferroportin1 (F 97.6 0.012 2.7E-07 55.9 20.0 165 111-277 9-195 (432)
250 KOG3810 Micronutrient transpor 97.6 0.00014 3E-09 65.2 6.4 235 126-372 27-264 (433)
251 PF00854 PTR2: POT family; In 97.6 0.0004 8.6E-09 65.4 9.5 108 172-280 2-121 (372)
252 PRK03612 spermidine synthase; 97.5 0.0097 2.1E-07 58.4 18.9 139 129-271 40-186 (521)
253 PF02487 CLN3: CLN3 protein; 97.5 0.0031 6.8E-08 58.9 14.1 106 144-253 284-394 (402)
254 KOG1237 H+/oligopeptide sympor 97.5 0.0038 8.2E-08 61.6 15.4 156 121-279 55-242 (571)
255 KOG3574 Acetyl-CoA transporter 97.5 0.0077 1.7E-07 55.1 15.8 135 111-250 38-189 (510)
256 PF03219 TLC: TLC ATP/ADP tran 97.4 0.05 1.1E-06 52.7 22.0 112 144-255 61-205 (491)
257 KOG2563 Permease of the major 97.3 0.001 2.2E-08 62.0 8.0 151 131-284 293-452 (480)
258 COG3104 PTR2 Dipeptide/tripept 97.2 0.016 3.5E-07 55.1 15.4 135 144-278 327-483 (498)
259 KOG4332 Predicted sugar transp 97.2 0.00086 1.9E-08 58.2 5.7 97 124-223 57-154 (454)
260 KOG1330 Sugar transporter/spin 96.9 0.0029 6.2E-08 59.4 6.9 126 134-261 278-417 (493)
261 KOG3098 Uncharacterized conser 96.9 0.11 2.3E-06 49.8 17.4 104 147-251 285-409 (461)
262 PF06963 FPN1: Ferroportin1 (F 96.8 0.099 2.1E-06 49.8 16.6 127 126-254 280-416 (432)
263 TIGR00805 oat sodium-independe 96.7 0.029 6.2E-07 56.7 13.2 64 122-187 349-415 (633)
264 PF13000 Acatn: Acetyl-coenzym 96.7 0.019 4E-07 54.7 10.7 140 110-253 6-177 (544)
265 TIGR00939 2a57 Equilibrative N 96.6 0.031 6.7E-07 53.6 12.1 107 144-251 310-429 (437)
266 PF03092 BT1: BT1 family; Int 96.4 0.021 4.5E-07 54.9 9.7 149 136-286 252-417 (433)
267 TIGR00939 2a57 Equilibrative N 96.3 0.062 1.3E-06 51.6 12.2 49 193-246 105-153 (437)
268 KOG2325 Predicted transporter/ 95.8 0.023 5E-07 54.4 6.3 77 196-273 389-466 (488)
269 KOG1479 Nucleoside transporter 95.7 0.71 1.5E-05 43.3 15.6 165 120-286 34-208 (406)
270 PF03137 OATP: Organic Anion T 95.2 0.0051 1.1E-07 60.6 0.0 134 121-256 323-514 (539)
271 KOG3762 Predicted transporter 95.1 0.014 3E-07 55.9 2.5 71 119-191 26-97 (618)
272 KOG3097 Predicted membrane pro 94.2 0.42 9E-06 43.2 9.4 73 150-223 67-139 (390)
273 PF01733 Nucleoside_tran: Nucl 93.9 0.017 3.7E-07 52.8 0.2 106 146-251 187-305 (309)
274 PF07672 MFS_Mycoplasma: Mycop 93.7 0.58 1.3E-05 40.9 9.1 79 144-222 144-232 (267)
275 PF01770 Folate_carrier: Reduc 93.4 2.9 6.3E-05 39.5 13.9 94 144-237 288-383 (412)
276 KOG1479 Nucleoside transporter 92.5 0.37 8.1E-06 45.1 6.5 106 144-251 285-400 (406)
277 TIGR00806 rfc RFC reduced fola 89.2 7.5 0.00016 37.7 12.0 107 144-253 301-409 (511)
278 KOG0637 Sucrose transporter an 88.9 0.26 5.5E-06 46.6 2.1 128 144-271 335-485 (498)
279 PF06912 DUF1275: Protein of u 88.8 14 0.0003 31.5 16.1 43 145-187 50-95 (209)
280 COG4262 Predicted spermidine s 87.8 23 0.00049 32.8 13.4 85 135-221 39-132 (508)
281 PF07672 MFS_Mycoplasma: Mycop 84.7 2.1 4.6E-05 37.5 5.2 55 226-280 2-60 (267)
282 KOG3880 Predicted small molecu 82.8 5.1 0.00011 36.2 6.8 69 185-253 333-401 (409)
283 KOG3880 Predicted small molecu 82.8 1.4 3E-05 39.7 3.3 129 147-280 68-197 (409)
284 TIGR00880 2_A_01_02 Multidrug 82.4 19 0.00042 27.3 10.6 41 144-184 90-130 (141)
285 COG1230 CzcD Co/Zn/Cd efflux s 77.5 55 0.0012 29.6 11.8 77 105-189 26-105 (296)
286 KOG3810 Micronutrient transpor 77.4 29 0.00064 32.2 9.9 109 144-255 274-384 (433)
287 PF01733 Nucleoside_tran: Nucl 77.3 0.75 1.6E-05 42.0 0.0 43 201-248 4-46 (309)
288 KOG3626 Organic anion transpor 76.9 5.9 0.00013 40.4 6.0 59 197-255 589-648 (735)
289 PRK10263 DNA translocase FtsK; 75.8 16 0.00036 39.6 9.1 20 151-170 62-81 (1355)
290 TIGR00769 AAA ADP/ATP carrier 74.9 87 0.0019 30.6 17.0 71 202-273 274-345 (472)
291 KOG4332 Predicted sugar transp 73.8 25 0.00054 31.4 8.2 95 143-237 284-387 (454)
292 PF07857 DUF1632: CEO family ( 72.7 22 0.00048 31.3 7.8 24 260-283 114-137 (254)
293 COG5336 Uncharacterized protei 72.2 12 0.00027 27.7 5.1 32 145-176 46-78 (116)
294 TIGR00927 2A1904 K+-dependent 71.9 24 0.00052 37.0 8.8 58 125-186 954-1011(1096)
295 PF11947 DUF3464: Protein of u 70.6 27 0.00057 28.0 7.1 51 192-245 95-145 (153)
296 PF03219 TLC: TLC ATP/ADP tran 67.3 1.3E+02 0.0029 29.5 14.0 65 202-267 290-355 (491)
297 PF12832 MFS_1_like: MFS_1 lik 63.2 36 0.00079 23.6 6.0 39 354-392 12-52 (77)
298 PF13000 Acatn: Acetyl-coenzym 62.7 1.6E+02 0.0035 28.9 12.9 48 199-246 410-457 (544)
299 COG1268 BioY Uncharacterized c 61.5 38 0.00083 28.2 6.7 26 147-172 88-113 (184)
300 TIGR00926 2A1704 Peptide:H+ sy 60.8 43 0.00094 34.2 8.4 61 193-253 564-624 (654)
301 PTZ00265 multidrug resistance 60.8 3E+02 0.0065 31.4 18.3 20 258-277 195-214 (1466)
302 PF07760 DUF1616: Protein of u 60.0 82 0.0018 28.4 9.3 57 197-254 22-78 (287)
303 PF02632 BioY: BioY family; I 58.2 34 0.00075 27.3 5.8 25 148-172 60-84 (148)
304 PF11151 DUF2929: Protein of u 56.9 51 0.0011 21.4 5.4 45 239-284 11-55 (57)
305 PF12805 FUSC-like: FUSC-like 56.6 92 0.002 28.0 9.1 35 175-209 3-38 (284)
306 KOG1307 K+-dependent Ca2+/Na+ 54.6 48 0.001 31.7 6.7 46 124-173 444-489 (588)
307 PF03547 Mem_trans: Membrane t 53.7 1.9E+02 0.0042 27.0 11.2 15 239-253 104-118 (385)
308 PF08566 Pam17: Mitochondrial 53.0 59 0.0013 26.6 6.3 67 328-395 24-95 (173)
309 PF01528 Herpes_glycop: Herpes 52.6 1E+02 0.0022 28.9 8.6 39 189-227 229-267 (374)
310 KOG3814 Signaling protein van 47.5 2.4E+02 0.0053 26.4 9.9 12 193-204 204-215 (531)
311 KOG1237 H+/oligopeptide sympor 45.8 61 0.0013 32.5 6.6 62 193-254 457-518 (571)
312 COG1288 Predicted membrane pro 45.4 1.2E+02 0.0027 28.9 8.0 23 256-278 214-236 (481)
313 TIGR01666 YCCS hypothetical me 44.9 3.8E+02 0.0082 27.8 12.1 49 162-210 44-97 (704)
314 TIGR00927 2A1904 K+-dependent 44.5 3.8E+02 0.0082 28.8 11.7 21 121-141 477-497 (1096)
315 COG1079 Uncharacterized ABC-ty 43.9 2.5E+02 0.0054 25.6 9.4 93 156-252 22-116 (304)
316 PF02694 UPF0060: Uncharacteri 43.7 46 0.001 24.7 4.0 47 144-190 57-103 (107)
317 PF01405 PsbT: Photosystem II 42.3 45 0.00096 18.2 2.7 15 272-286 14-28 (29)
318 TIGR01667 YCCS_YHJK integral m 42.1 3.8E+02 0.0083 27.8 11.7 43 168-210 54-97 (701)
319 PF06123 CreD: Inner membrane 41.9 2.2E+02 0.0047 27.4 9.3 55 174-232 329-383 (430)
320 PRK11715 inner membrane protei 41.8 2.2E+02 0.0047 27.5 9.2 19 174-192 335-353 (436)
321 COG3202 ATP/ADP translocase [E 41.0 3.6E+02 0.0078 26.5 13.2 72 202-274 292-365 (509)
322 PRK02237 hypothetical protein; 40.5 75 0.0016 23.7 4.6 47 144-190 59-105 (109)
323 PF11299 DUF3100: Protein of u 40.3 18 0.00039 31.1 1.6 47 202-249 179-225 (241)
324 PF00854 PTR2: POT family; In 39.8 1E+02 0.0022 28.8 6.9 66 126-191 54-122 (372)
325 PF02535 Zip: ZIP Zinc transpo 39.6 2.9E+02 0.0062 25.0 15.8 29 198-226 264-293 (317)
326 COG3619 Predicted membrane pro 38.6 2.6E+02 0.0057 24.2 17.3 27 144-170 58-84 (226)
327 COG3162 Predicted membrane pro 38.2 1.6E+02 0.0035 21.6 6.0 63 328-392 12-74 (102)
328 KOG2765 Predicted membrane pro 37.9 2E+02 0.0042 27.0 7.8 13 165-177 208-220 (416)
329 TIGR00844 c_cpa1 na(+)/h(+) an 36.6 3.9E+02 0.0085 28.1 10.6 13 258-270 128-140 (810)
330 PRK11875 psbT photosystem II r 36.6 56 0.0012 18.1 2.6 14 273-286 15-28 (31)
331 PRK14229 camphor resistance pr 36.4 1.8E+02 0.004 21.7 7.9 23 203-225 58-80 (108)
332 PF06570 DUF1129: Protein of u 36.3 2.7E+02 0.0058 23.6 9.9 8 269-276 185-192 (206)
333 COG4769 Predicted membrane pro 36.1 52 0.0011 26.6 3.5 50 151-206 83-132 (181)
334 COG2233 UraA Xanthine/uracil p 35.5 4.2E+02 0.0092 25.7 12.3 101 129-231 39-142 (451)
335 CHL00031 psbT photosystem II p 33.2 63 0.0014 18.2 2.5 15 272-286 14-28 (33)
336 PF10785 NADH-u_ox-rdase: NADH 32.0 1.5E+02 0.0033 21.1 5.1 37 157-193 34-77 (86)
337 PRK10692 hypothetical protein; 31.9 1.5E+02 0.0033 21.0 4.8 17 170-186 3-19 (92)
338 PF12670 DUF3792: Protein of u 31.5 2.3E+02 0.005 21.4 9.0 44 236-280 44-87 (116)
339 PRK10697 DNA-binding transcrip 31.3 56 0.0012 24.9 2.9 12 275-286 57-68 (118)
340 PRK11588 hypothetical protein; 31.1 5E+02 0.011 25.6 9.9 14 258-271 229-242 (506)
341 KOG3796 Ammonium transporter R 30.9 3.7E+02 0.0081 25.1 8.4 114 131-252 76-197 (442)
342 TIGR03802 Asp_Ala_antiprt aspa 30.5 4.2E+02 0.0091 26.6 9.7 80 143-225 452-533 (562)
343 PF12273 RCR: Chitin synthesis 30.0 16 0.00034 28.5 -0.3 16 261-276 1-16 (130)
344 KOG3574 Acetyl-CoA transporter 29.9 5.1E+02 0.011 24.9 9.6 56 200-255 375-430 (510)
345 KOG1277 Endosomal membrane pro 29.5 3E+02 0.0066 26.6 7.8 29 144-172 326-358 (593)
346 PF11833 DUF3353: Protein of u 29.4 2.4E+02 0.0051 23.8 6.6 27 229-255 140-166 (194)
347 PRK03818 putative transporter; 28.7 5.5E+02 0.012 25.8 10.1 78 144-222 438-516 (552)
348 PF06638 Strabismus: Strabismu 28.5 5.7E+02 0.012 25.0 11.1 12 192-203 179-190 (505)
349 KOG2881 Predicted membrane pro 28.2 4.3E+02 0.0092 23.5 10.5 18 259-276 128-145 (294)
350 PRK14230 camphor resistance pr 28.0 2.8E+02 0.006 21.2 6.3 22 203-224 62-83 (119)
351 PHA03242 envelope glycoprotein 27.3 4.6E+02 0.01 25.2 8.7 54 189-242 243-300 (428)
352 COG5547 Small integral membran 26.9 1.8E+02 0.004 18.8 4.6 17 173-189 10-26 (62)
353 PF13829 DUF4191: Domain of un 26.1 1.6E+02 0.0034 25.4 5.0 41 230-274 25-65 (224)
354 PHA03237 envelope glycoprotein 25.7 5.8E+02 0.013 24.5 9.0 54 189-242 246-303 (424)
355 KOG3097 Predicted membrane pro 25.6 1.5E+02 0.0033 27.4 5.1 40 144-183 313-352 (390)
356 PF11947 DUF3464: Protein of u 25.3 2.3E+02 0.0049 22.8 5.5 28 144-171 99-126 (153)
357 PLN02332 membrane bound O-acyl 25.2 3E+02 0.0066 26.8 7.5 30 169-198 339-368 (465)
358 PRK03612 spermidine synthase; 24.4 6.9E+02 0.015 24.8 10.0 42 144-185 148-191 (521)
359 KOG4255 Uncharacterized conser 24.2 5.9E+02 0.013 23.7 9.6 120 123-250 30-163 (439)
360 PF10762 DUF2583: Protein of u 24.0 2E+02 0.0043 20.3 4.2 17 170-186 3-19 (89)
361 PF09527 ATPase_gene1: Putativ 23.6 2E+02 0.0044 18.2 5.9 34 149-182 8-42 (55)
362 PF06645 SPC12: Microsomal sig 23.5 2.5E+02 0.0055 19.5 4.8 47 234-286 12-58 (76)
363 PRK04972 putative transporter; 23.4 4.7E+02 0.01 26.2 8.6 101 143-245 64-176 (558)
364 PF06341 DUF1056: Protein of u 23.1 2.3E+02 0.0049 18.9 4.2 35 192-227 26-60 (63)
365 PF08566 Pam17: Mitochondrial 22.9 1.7E+02 0.0037 24.0 4.4 29 133-161 71-99 (173)
366 PRK12996 ulaA PTS system ascor 22.7 7.2E+02 0.016 24.2 11.4 57 192-250 146-203 (463)
367 PF04281 Tom22: Mitochondrial 22.5 2E+02 0.0043 22.7 4.6 23 218-240 59-81 (137)
368 COG4177 LivM ABC-type branched 22.4 4.1E+02 0.0089 24.4 7.3 58 196-254 210-267 (314)
369 PF04474 DUF554: Protein of un 22.2 3.2E+02 0.0069 23.7 6.2 54 150-203 11-64 (226)
370 PF05255 UPF0220: Uncharacteri 22.0 4.4E+02 0.0096 21.5 8.3 60 222-281 14-78 (166)
371 KOG2927 Membrane component of 21.9 1.7E+02 0.0036 27.0 4.6 8 163-170 181-188 (372)
372 PTZ00101 rhomboid-1 protease; 21.4 6E+02 0.013 22.8 14.7 38 152-189 119-157 (278)
373 COG1811 Uncharacterized membra 21.3 4.2E+02 0.009 22.7 6.4 54 151-204 13-66 (228)
374 PF06779 DUF1228: Protein of u 21.3 3.1E+02 0.0068 19.5 7.6 65 205-273 5-69 (85)
375 KOG4112 Signal peptidase subun 21.3 3.3E+02 0.0071 19.8 5.0 24 230-253 23-46 (101)
376 PF04024 PspC: PspC domain; I 21.0 95 0.0021 20.5 2.2 28 258-285 29-60 (61)
377 COG5336 Uncharacterized protei 20.9 2.5E+02 0.0054 21.0 4.5 32 183-214 62-93 (116)
378 PF10225 DUF2215: Uncharacteri 20.7 4.4E+02 0.0095 23.2 7.0 7 218-224 56-62 (249)
379 PF13937 DUF4212: Domain of un 20.6 2.8E+02 0.006 19.6 4.6 32 245-276 28-60 (81)
380 TIGR02978 phageshock_pspC phag 20.5 1.8E+02 0.0039 22.3 4.0 28 259-286 30-63 (121)
381 PF06123 CreD: Inner membrane 20.4 7.8E+02 0.017 23.8 11.2 17 163-179 344-360 (430)
382 PF09911 DUF2140: Uncharacteri 20.3 93 0.002 26.0 2.6 18 259-276 2-19 (187)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=1e-28 Score=245.97 Aligned_cols=269 Identities=22% Similarity=0.282 Sum_probs=216.0
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhH
Q 015968 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (397)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 179 (397)
+..|.++++++++.+..+++...++.++|.+.+++|++..+. +++.+++.++++++.+++|+++||+|||++++++.+
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~--g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGK--GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 456667777888888888888888899999999999998887 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC---
Q 015968 180 PLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN--- 256 (397)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--- 256 (397)
+.+++.++++++++++.++++|++.|++.|+..+....+++|++|++.|+..++++.++..+|.++++.++..+...
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988776544321
Q ss_pred ---------CcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcch----HHH---HHHHHhh
Q 015968 257 ---------PLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERV----SEV---MLDLTNA 320 (397)
Q Consensus 257 ---------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~ 320 (397)
..+||+.+++.+++.++.+++.+++||+|+|+..+++.+++.+.++++...+.. +.. ....+..
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~ 400 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTI 400 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHh
Confidence 147999999888888877777888999999999999999999999888754321 110 0111100
Q ss_pred c------C-CCCCCc-----------------cchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH
Q 015968 321 G------Q-GSAEPE-----------------AGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS 371 (397)
Q Consensus 321 ~------~-~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (397)
. + +.+... ..++++++.++++.+++.++++ +....+++.+..|+|.++..
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~w-f~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 401 HQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVW-FTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred hhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000000 1355677776777766655555 55556789999999998755
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=9.5e-28 Score=225.28 Aligned_cols=298 Identities=32% Similarity=0.587 Sum_probs=244.6
Q ss_pred cchHHHHHHHHHHHHHHHHHhHhhchhhHHHHH--------HHhC--CCch--hhHHHHHHHHHHHHHHHHHHhhhhhhc
Q 015968 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLA--------KDLG--IAEN--TVLQGWIVSSLLAGATVGSFTGGSLAD 166 (397)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~--~~~~~~~~~~~~~~~~i~~~~~g~l~d 166 (397)
.++....+.++.++.+..+|..+.+++..+.+. +.+| .+++ +.+.+.+.+++.+|.++|+++.++++|
T Consensus 6 t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~ 85 (485)
T KOG0569|consen 6 TRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLAD 85 (485)
T ss_pred cHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666677777888888888877655443 3445 3332 234678899999999999999999999
Q ss_pred ccchHHHHHHhhHHHHHHHHHHHh---hchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHH
Q 015968 167 KFGRTRTFQLDAVPLAAGAFLCAT---AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGI 243 (397)
Q Consensus 167 ~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 243 (397)
|+|||..+.++.++..++.+++.+ .+++.+++++|++.|+..|......+.|+.|..|.+.||........+..+|.
T Consensus 86 ~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ 165 (485)
T KOG0569|consen 86 RFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGI 165 (485)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHH
Confidence 999999999998888887776665 47899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-hcCCCCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHH-cCCHHHHHHHHHHHhCCcchHHHHHHHH---
Q 015968 244 LAALVAGL-PLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQ-QGKKSEAEKSIQTLYGKERVSEVMLDLT--- 318 (397)
Q Consensus 244 ~~~~~~~~-~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 318 (397)
+++..++. .+......|++.+.+..+++++.++...++||+|+|+.. +++.+++++.+++++++++++++.++..
T Consensus 166 ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~ 245 (485)
T KOG0569|consen 166 LLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREI 245 (485)
T ss_pred HHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 99966654 344444779999999999999999999999999999987 8999999999999999876554443322
Q ss_pred hhcCCCCCCccchhhhhcc-chhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 319 NAGQGSAEPEAGWFDLFSS-RYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
+..+.+++++.++++++++ ..+++..+.+.+..+.++.|.+++.+|...++++.|++.. ..+....+..+++.++++
T Consensus 246 ~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~ 325 (485)
T KOG0569|consen 246 EEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVS 325 (485)
T ss_pred HHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222233467789999998 4778888888999999999999999999999999999987 677778888888887776
Q ss_pred c
Q 015968 396 S 396 (397)
Q Consensus 396 ~ 396 (397)
.
T Consensus 326 ~ 326 (485)
T KOG0569|consen 326 P 326 (485)
T ss_pred H
Confidence 4
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=1.6e-26 Score=224.83 Aligned_cols=289 Identities=31% Similarity=0.553 Sum_probs=211.7
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHh--------CCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHH
Q 015968 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDL--------GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTR 172 (397)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~ 172 (397)
....++.++.++.+..+++...+++..+.+++++ +.+..+. +++.+++.++.+++++++|+++||+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLL--GFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred HHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3455666677888999999999999999999988 7777777 99999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhh------------chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHH
Q 015968 173 TFQLDAVPLAAGAFLCATA------------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFIC 240 (397)
Q Consensus 173 ~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 240 (397)
+++++.++.+++.++++++ +.+..+++.|+++|++.|...+...++++|++|+++|++++++...+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 9999999999888877763 2356788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCC-------CCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHH
Q 015968 241 VGILAALVAGLPLAG-------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEV 313 (397)
Q Consensus 241 ~g~~~~~~~~~~l~~-------~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (397)
+|.++++++++.+.. ...+||+.|++.+++.++..+..+++||+|+++..+++.++..+..++..+.++.++.
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 999998887664431 1268999999988888777766778899999887777777766666665544433332
Q ss_pred HHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHh
Q 015968 314 MLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFG 391 (397)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g 391 (397)
.++.++..+++..+ ....+. .......+......+.+..+.+.+.+|.|.++++.|++.. .......++..+++
T Consensus 247 ~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~ 322 (479)
T PRK10077 247 LQEIKHSLDHGRKT---GGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTF 322 (479)
T ss_pred HHHHHHHHHHhhhh---hhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHH
Confidence 22222211100000 011111 1112222333344555566667778889999999888754 33444455555555
Q ss_pred hhhc
Q 015968 392 NYSI 395 (397)
Q Consensus 392 ~~~~ 395 (397)
.+++
T Consensus 323 ~~~~ 326 (479)
T PRK10077 323 TVLA 326 (479)
T ss_pred HHHH
Confidence 5443
No 4
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.2e-26 Score=226.78 Aligned_cols=294 Identities=43% Similarity=0.683 Sum_probs=236.9
Q ss_pred HHHHHHHHHHHHHHHHHh--HhhchhhHHHHHHHhCCCch---h--hHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHH
Q 015968 102 VLPFVGVACLGAILFGYH--LGVVNGALEYLAKDLGIAEN---T--VLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTF 174 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l 174 (397)
.........+..+..+++ .+..+++...+.++...+.. . ...+|+.+++.++..+++++.|+++|++|||+.+
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 344555556666676665 45556666677664322211 1 1237999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 175 QLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
+++.+++.++.+++++++|+++++++|++.|+|.|....+.+.|++|..|++.||...+..+....+|..++.+++....
T Consensus 123 ~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999977666554
Q ss_pred CCCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhC--CcchHHHHHHHHhhc-CC--CCCCcc
Q 015968 255 GNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYG--KERVSEVMLDLTNAG-QG--SAEPEA 329 (397)
Q Consensus 255 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~--~~~~~~ 329 (397)
+...+||..+++..+.+++..+..+++||+|+|+.++++.+++++.++++++ +.+.+.+.++.+.+. .+ ..+.+.
T Consensus 203 ~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (513)
T KOG0254|consen 203 KVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKA 282 (513)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccc
Confidence 3214899999999999988888888899999999999999999999999988 444444444443111 11 112223
Q ss_pred chhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh-HHHHHHHHHHHHHhhhhc
Q 015968 330 GWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD-VAASALVGAANVFGNYSI 395 (397)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~g~~~~ 395 (397)
.+.++++...+++..++..+..+++++|++.+.+|.+.+++..|.... .....+.++.++++++++
T Consensus 283 ~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~ 349 (513)
T KOG0254|consen 283 SWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVA 349 (513)
T ss_pred cHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 577777766888899999999999999999999999999999998865 566677777777777665
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=1.3e-26 Score=226.52 Aligned_cols=274 Identities=20% Similarity=0.291 Sum_probs=200.3
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHh-----CCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHH
Q 015968 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDL-----GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTF 174 (397)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l 174 (397)
+..+.++.++.++.+..+++...++...+.+..++ +.+..+. +++.+.+.+++.++.+++|+++||+|||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVS--AAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 34555777788889999999999998888887753 2233333 8999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhch------HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHH
Q 015968 175 QLDAVPLAAGAFLCATAQS------VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALV 248 (397)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 248 (397)
.++.++..++.++++++++ ++.++++|++.|++.|..++....+++|++|+++|++++++.+.+..+|.++++.
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 90 GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888765 7899999999999999999999999999999999999999999999999988888
Q ss_pred HhhhcCC----------------------CCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHH-HHHHHHHHHh
Q 015968 249 AGLPLAG----------------------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKS-EAEKSIQTLY 305 (397)
Q Consensus 249 ~~~~l~~----------------------~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~ 305 (397)
++..+.. ...+||+.|.+.++..++..+..+++||+|+|+..+++.+ ++.+.+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 170 VALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 7764321 1147999998888888877777888999999998877653 4555555554
Q ss_pred CCcchHHHHHHHHhhcCCCCCCccchhhhhccch---hHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCCh
Q 015968 306 GKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRY---WKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIES 376 (397)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 376 (397)
..+..++ .++.++..+++++.+.+++++++.+. .++..+.....++.....++.+..|.|.++++.|++.
T Consensus 250 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~ 322 (502)
T TIGR00887 250 QVKIEAE-PDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSP 322 (502)
T ss_pred ccccccC-cccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCC
Confidence 3221111 01111100111112235777776421 1122232222233333335566777899998888864
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.4e-27 Score=212.46 Aligned_cols=278 Identities=16% Similarity=0.074 Sum_probs=217.3
Q ss_pred cccCcchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHH
Q 015968 95 AKKSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTF 174 (397)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l 174 (397)
.+...+.++.++..++++....++....++.+.|.+.++.++|.++. |++.+.+.++|.++.++.|.++||.+.|..+
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~l--G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQL--GILGSAFSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence 34445566778888888898888889999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHh--hh
Q 015968 175 QLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAG--LP 252 (397)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~ 252 (397)
.+++++.++.+++++++++.+.+.++.++.|+++|.-.|.+...++.||+++|||+..++++.+.++|+.+.|++. +.
T Consensus 98 ~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888888 77
Q ss_pred cCCCCcchHHHHHHhHHHHHHHHHHh-ccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhh-cCCCCCCccc
Q 015968 253 LAGNPLWWRTMFGLAAIPSILLALGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNA-GQGSAEPEAG 330 (397)
Q Consensus 253 l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 330 (397)
+..+ .+||..|++.++++++..++. +..+|+|+..- -.+.++...+..+. .++++.+..+
T Consensus 178 ~~~~-~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~G-----------------LP~ie~~~~d~~e~~~~~~~~~~ls 239 (448)
T COG2271 178 FAFH-GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEG-----------------LPPIEEYRGDPLEIYEEEKENEGLT 239 (448)
T ss_pred HHhc-cchhHHHHHHHHHHHHHHHHHHHHhCCCccccC-----------------CCCHHHhhcCchhhhhhhccCCCcc
Confidence 7766 699999999999997766554 44677776211 01111111011110 1111111133
Q ss_pred h-----hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhhcc
Q 015968 331 W-----FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYSIS 396 (397)
Q Consensus 331 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~~~ 396 (397)
. +.+++++..|.+.++ .+..+..-+.+..|.|.++.+ .|++.. .....+.-.+++.|+++++
T Consensus 240 ~~~i~~~YVL~Nk~iW~la~a----~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~G 309 (448)
T COG2271 240 AWQIFVKYVLKNKLIWLLALA----NVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAG 309 (448)
T ss_pred HHHHHHHHHHcChHHHHHHHH----HHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3 334455544444444 333344467899999999987 588865 5667777888899988764
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=8.2e-26 Score=219.30 Aligned_cols=294 Identities=39% Similarity=0.637 Sum_probs=212.3
Q ss_pred cchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCC--------chhhHHHHHHHHHHHHHHHHHHhhhhhhcccch
Q 015968 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIA--------ENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR 170 (397)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr 170 (397)
.++.+...+++.+..++..++...+....+.+..+++.+ ..+. +++.+++.++..++++++|+++||+||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~g~l~d~~gr 100 (481)
T TIGR00879 23 YWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLW--GLVVSIFLVGGFIGALFAGWLSDRFGR 100 (481)
T ss_pred cHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHH--HHHHHHHHHHHHHHHHHhhHhhhhhhh
Confidence 344555566666677777788888888888888888877 5555 999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhh---chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHH
Q 015968 171 TRTFQLDAVPLAAGAFLCATA---QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (397)
Q Consensus 171 r~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 247 (397)
|++++++.++.+++.+++.+. .+++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++
T Consensus 101 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 180 (481)
T TIGR00879 101 KKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAY 180 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999888654 34568999999999999999999999999999999999999999999999999999
Q ss_pred HHh---hhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHH----HHHHhh
Q 015968 248 VAG---LPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVM----LDLTNA 320 (397)
Q Consensus 248 ~~~---~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 320 (397)
+++ ...... .+||+.|++.++..++.++..+++||+|++...+++.++..+..++....++.+... ......
T Consensus 181 ~~~~~~~~~~~~-~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (481)
T TIGR00879 181 GFGSGKVSLNNT-LGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIK 259 (481)
T ss_pred HHHHHhhcCCCC-ccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 998 555444 799999999777777776777788999988776666655555444433322111111 000000
Q ss_pred c-CCCCCCccchhhhhccc--hhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 321 G-QGSAEPEAGWFDLFSSR--YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 321 ~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
. .+.+..+..+.++++.. ..++..+...+..+....+...+.+|.|.++++.|++.. .....+..++.+++.+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 339 (481)
T TIGR00879 260 RSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVA 339 (481)
T ss_pred HHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 0 00111112244444421 234555555555555555566778889999999998874 344445555556665543
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=8.1e-26 Score=206.20 Aligned_cols=253 Identities=22% Similarity=0.255 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH
Q 015968 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 182 (397)
+..++.+.++.|..+........++|.+.+|+|++..+. |++++.|.++..++.++...+.||+.||++++..+.+++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~a--G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAA--GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 345556667777777778888889999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHH
Q 015968 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (397)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 262 (397)
++++++++++||+.++++|++.|+..|.+++...++..++.|+++|++++++...+..++.++|..++.++.+. .|||+
T Consensus 90 ~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~-~GWR~ 168 (394)
T COG2814 90 VSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL-FGWRA 168 (394)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH-hhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887 99999
Q ss_pred HHHHhHHHHHHHHHH-hccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhH
Q 015968 263 MFGLAAIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK 341 (397)
Q Consensus 263 ~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
.|++.++++++..+. +..+| |+.. .+ +...+..+..+++|++..+
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP--~~~~--~~------------------------------~~~~~~~~~~~~l~~p~v~ 214 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP--PSEI--SG------------------------------SLPGPLRTLLRLLRRPGVL 214 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CccC--CC------------------------------CCCcchhHHHHHhcCchHH
Confidence 999999998776654 44567 1100 00 0000111234566665555
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhhcc
Q 015968 342 VVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYSIS 396 (397)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~~~ 396 (397)
..++...+. +.+.+....|+..++++ .|++.+ +.....+|++.++|+++++
T Consensus 215 ~~l~~t~l~----~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gG 268 (394)
T COG2814 215 LGLLATFLF----MTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGG 268 (394)
T ss_pred HHHHHHHHH----HcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHh
Confidence 544433333 34566677777667766 588876 7788889999999998875
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=1.3e-25 Score=213.84 Aligned_cols=183 Identities=16% Similarity=0.131 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
.|..+.++++..++.+++...++...|.+++|+|++..+. +++.+++.+++.+++++.|+++||+|||+++..+.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMF--GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 3556666677777888888888889999999999999988 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC-----
Q 015968 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN----- 256 (397)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----- 256 (397)
+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++++++.+...
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999998889999999999999999999999999999999998876531
Q ss_pred CcchHHHHHHhHHHHHHHH-HHhccCCCChH
Q 015968 257 PLWWRTMFGLAAIPSILLA-LGMGLSPESPR 286 (397)
Q Consensus 257 ~~~w~~~~~~~~~~~~~~~-~~~~~~~e~~~ 286 (397)
..|||+.|++.+++.++.. +..+++||+|+
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 2689999999888876554 44556788874
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=1.9e-24 Score=210.44 Aligned_cols=266 Identities=17% Similarity=0.211 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhh---HHHH-HHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTV---LQGW-IVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 180 (397)
.+...+++.++.+++...++...|.+.++++.+.++. ...+ +.++.++++.++++++|+++||+|||++++++.++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 4556678888999999999999999999997544321 1111 24778899999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHH--------HHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015968 181 LAAGAFLCATAQSVQT--------MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLP 252 (397)
Q Consensus 181 ~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 252 (397)
++++.++++++++++. ++++|+++|++.|+.++....+++|++|+++|+++.++...+..+|.++++.+...
T Consensus 97 ~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~ 176 (490)
T PRK10642 97 MSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL 176 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999874 89999999999999999999999999999999999999998888888777765433
Q ss_pred cC----C---CCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCC
Q 015968 253 LA----G---NPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSA 325 (397)
Q Consensus 253 l~----~---~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
+. + ...|||+.|++.+++.++.+++...+||+|++...+++.++.. ++. ..+
T Consensus 177 ~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~-------------------~~~--~~~ 235 (490)
T PRK10642 177 ISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD-------------------REG--LQD 235 (490)
T ss_pred HHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc-------------------ccc--ccc
Confidence 22 1 1379999999977666655555567899988653221110000 000 001
Q ss_pred CCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhh
Q 015968 326 EPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNY 393 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~ 393 (397)
+++.+++++++. +++.+.+..... +.....++.+..|+|.++++ .|++.. ........++.+++.+
T Consensus 236 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~ 304 (490)
T PRK10642 236 GPKVSFKEIATK-HWRSLLTCIGLV-IATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQP 304 (490)
T ss_pred cccCCHHHHHHH-hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 123346666664 333333333222 22233466777889998864 688764 2223333344444433
No 11
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=5.8e-24 Score=202.16 Aligned_cols=187 Identities=23% Similarity=0.303 Sum_probs=166.0
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhH
Q 015968 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (397)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 179 (397)
++.|..+..++++.+..+++....+...+.+++++|++..+. +++.+++.++..++.++.|+++||+|||++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDA--ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 455666777788888888989999999999999999999888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC-c
Q 015968 180 PLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP-L 258 (397)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~ 258 (397)
+.+++.++++++++++.+++.|++.|++.+..++...+++.|++|+++|++++++...+..+|.++++.+++.+.+.. .
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988876541 2
Q ss_pred chHHHHHHhHHHHHHHHHHhccCCCChHHH
Q 015968 259 WWRTMFGLAAIPSILLALGMGLSPESPRWL 288 (397)
Q Consensus 259 ~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 288 (397)
+||+.|++.++..++.++....+||++++.
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWK 195 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 599999887766666655566678876543
No 12
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=5.8e-24 Score=203.84 Aligned_cols=266 Identities=19% Similarity=0.254 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHH
Q 015968 104 PFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (397)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~ 183 (397)
..+..+++..+..+++.....+..|.+.+++|++..+. +++.+++.+++.+++++.|+++||+|||++++++.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~ 95 (426)
T PRK12307 18 NALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEG--AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34566677777888888888889999999999999888 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHH
Q 015968 184 GAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTM 263 (397)
Q Consensus 184 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 263 (397)
+.++++++++++.++++|++.|++.+..++....++.|++|+++|++++++...+..+|.++++.+.+.+.+. .+||+.
T Consensus 96 ~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~-~~w~~~ 174 (426)
T PRK12307 96 GTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA-YGWRAA 174 (426)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc-CCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988887766 799999
Q ss_pred HHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHH
Q 015968 264 FGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVV 343 (397)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
|++.++..++...+....||++++..++.+ .++ ++.....+..+..++++++++..+..
T Consensus 175 f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (426)
T PRK12307 175 FFVGLLPVLLVIYIRARAPESKEWEEAKLS------------GKG---------KHSQSAWSVFSLSMKGLFNRAQFPLT 233 (426)
T ss_pred HHHHHHHHHHHHHHHHHCCCChHHHHhhhh------------ccc---------cccccchhhhhHHHHHHHhhchHHHH
Confidence 987554443333332234555432211000 000 00000000112245677776655544
Q ss_pred HHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhh
Q 015968 344 SVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYS 394 (397)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~ 394 (397)
....... +..+...+.+..++|.++++.|++.. .....+.+++.++|.++
T Consensus 234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 285 (426)
T PRK12307 234 LCVFIVL-FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIV 285 (426)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4332222 22223334466788988888888765 33444555556665554
No 13
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=2.2e-24 Score=201.62 Aligned_cols=220 Identities=15% Similarity=0.082 Sum_probs=166.2
Q ss_pred HhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHH
Q 015968 120 LGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMII 199 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (397)
...+++..|.+++|+|++..+. |++.+.+.+++.+++++.|+++||+|||++++.+.+....+.+.....++++.+++
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEEL--GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLA 84 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3455778999999999999888 99999999999999999999999999998876655555444333333479999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH-Hh
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL-GM 278 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~-~~ 278 (397)
+|+++|++.+. .......++|++|+++|++++++...+..+|.++++++++.+.+. .|||+.|++.+++.++..+ ..
T Consensus 85 ~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 85 CQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-GGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHH
Confidence 99999999986 455566679999999999999999999999999999999998876 8999999998887755544 45
Q ss_pred ccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhh
Q 015968 279 GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGI 358 (397)
Q Consensus 279 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
+++||+|++.. ++. +.++ . ...++++++++..+.+.+. .++.....
T Consensus 163 ~~lp~~p~~~~--~~~--------------~~~~---~-----------~~~~~~ll~~~~~~~~~~~----~~~~~~~~ 208 (368)
T TIGR00903 163 AALPALPFQAA--EGF--------------GFKD---A-----------VKEFGALAGRKDLWIIGAI----LGFGVALF 208 (368)
T ss_pred HHcCCCCCCCC--CCc--------------chHH---H-----------HHHHHHHHcChhHHHHHHH----HHHHHHHH
Confidence 56788875321 000 0000 0 0124567777655554433 33334446
Q ss_pred HHHHHhHHHHHHHcCCChh
Q 015968 359 NAVVYYSTSVFRSVGIESD 377 (397)
Q Consensus 359 ~~~~~~~~~~~~~~g~~~~ 377 (397)
+.+..|+|.++++.|++..
T Consensus 209 ~~~~~wlp~~L~~~g~s~~ 227 (368)
T TIGR00903 209 DNLAIWLEAALRPAGLEDI 227 (368)
T ss_pred HHHHHHHHHHHHHCCCChH
Confidence 7788899999998888754
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=2.7e-24 Score=206.36 Aligned_cols=179 Identities=17% Similarity=0.177 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG 184 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 184 (397)
+...+++..+...++...++...|.+.+++|++..+. +++.+.+.+++.+++++.|+++||+|||+++.++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDI--GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHH
Confidence 4444555566666666666778999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHH
Q 015968 185 AFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (397)
Q Consensus 185 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~ 264 (397)
.++++++++++.+++.|++.|++.|..++....++.|++|+++|++++++++.+..+|.++++.+.+.+.+. .+||+.|
T Consensus 102 ~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gw~~~f 180 (434)
T PRK11663 102 NILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH-YGWRYGM 180 (434)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccHHHHH
Confidence 999999999999999999999999988898999999999999999999999999999999999999888776 7999999
Q ss_pred HHhHHHHHHHH-HHhccCCCChH
Q 015968 265 GLAAIPSILLA-LGMGLSPESPR 286 (397)
Q Consensus 265 ~~~~~~~~~~~-~~~~~~~e~~~ 286 (397)
++.+++.++.. +..++++|+|+
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 181 MIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHh
Confidence 98887765544 34445677765
No 15
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=7.1e-24 Score=206.68 Aligned_cols=181 Identities=17% Similarity=0.157 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
.|..+..++++.++..++.++++...|.+.+++|.+.++. +|+.+.|.+++.++.+++|+++||+|||++++++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~--~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNEL--LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4567888899999999999999999999999999998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhccc-CcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcch
Q 015968 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (397)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 260 (397)
+++++++++++|++.++++|+++|++.+...+.....+.+.+ |+++|+++++++.....+|..+||.+++.+.+. .+|
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~-~gw 160 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH-FYW 160 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCh
Confidence 999999999999999999999999999998888777777766 678899999999999999999999999999887 899
Q ss_pred HHHHHHhHHHHHHHHH-HhccCCCCh
Q 015968 261 RTMFGLAAIPSILLAL-GMGLSPESP 285 (397)
Q Consensus 261 ~~~~~~~~~~~~~~~~-~~~~~~e~~ 285 (397)
||.|++...+.++.++ ..+++|+++
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999998777655544 344567654
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=1.6e-23 Score=198.25 Aligned_cols=231 Identities=22% Similarity=0.194 Sum_probs=175.9
Q ss_pred hchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHH
Q 015968 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGR 201 (397)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (397)
...+..|.+.+++|.+.++. ++..+.+.++..+++++.|+++||+|||++++.+.++.+++.++++++++++.++++|
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVA--GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 33456788999999999888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc-c
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG-L 280 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~-~ 280 (397)
++.|++.+...+....++.|++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|++.+++.++..+... .
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~l~~~~~l~~~~~ 194 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-IGWRNVFNAAAVMGVLCIFWIIKS 194 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998876 7999999988776655444332 3
Q ss_pred CCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHH
Q 015968 281 SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINA 360 (397)
Q Consensus 281 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
.||+++. + + +.....++.++++..+...+...... .+.+.
T Consensus 195 ~p~~~~~-----~-~------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~ 234 (394)
T PRK10213 195 LPSLPGE-----P-S------------------------------HQKQNTFRLLQRPGVMAGMIAIFMSF----AGQFA 234 (394)
T ss_pred CCCCCcc-----c-c------------------------------cchhHHHHHhcCHHHHHHHHHHHHHH----HHHHH
Confidence 5554310 0 0 00111234555554444333222222 22333
Q ss_pred HHHh-HHHHHHHcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 361 VVYY-STSVFRSVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 361 ~~~~-~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
...| .|.+.++.|++.. .......+++.++|.++.
T Consensus 235 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~ 272 (394)
T PRK10213 235 FFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLS 272 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 3444 4777777888875 444555666666666543
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.93 E-value=1.9e-23 Score=200.49 Aligned_cols=185 Identities=18% Similarity=0.243 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhC---CCchhh-HHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHh
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLG---IAENTV-LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLD 177 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~ 177 (397)
++..+..++++.++.+++...++...|.+.++++ .+..+. ..+.+.+..+++..++++++|+++||+|||+++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4445666677888899999999999999999985 444332 112233444455559999999999999999999999
Q ss_pred hHHHHHHHHHHHhhchHH--------HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHH
Q 015968 178 AVPLAAGAFLCATAQSVQ--------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVA 249 (397)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 249 (397)
.++++++++++++++++. .++++|+++|++.|+.++...++++|++|+++|+++.++...+..+|.++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988764 589999999999999999999999999999999999999888888888877766
Q ss_pred hhhcCC-------CCcchHHHHHHhHHHHHHHHHHhccCCCChH
Q 015968 250 GLPLAG-------NPLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (397)
Q Consensus 250 ~~~l~~-------~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 286 (397)
...+.. ...|||+.|++.+++.++..++...+||+++
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~ 223 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQ 223 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 544321 1279999999888777666555555677654
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=1.5e-23 Score=199.62 Aligned_cols=185 Identities=26% Similarity=0.394 Sum_probs=165.6
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhH
Q 015968 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (397)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 179 (397)
++.|.++.++++..++.+++....+...|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||++++.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQM--GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 466778888888888999999888889999999999998888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 015968 180 PLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW 259 (397)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 259 (397)
+.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++++.+..+|..+++.+++.+.+. .+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~ 167 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD-AA 167 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-cC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998877765 78
Q ss_pred hHHHHHHhHHHHHHHHH-HhccCCCChHH
Q 015968 260 WRTMFGLAAIPSILLAL-GMGLSPESPRW 287 (397)
Q Consensus 260 w~~~~~~~~~~~~~~~~-~~~~~~e~~~~ 287 (397)
|++.|++.+++.++.++ ..+++||++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 99999988776655443 44557887754
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=8.4e-24 Score=200.31 Aligned_cols=174 Identities=19% Similarity=0.158 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHH
Q 015968 108 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL 187 (397)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 187 (397)
.+.+..+..........+..|.+.+++|.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+.++.++++++
T Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 90 (390)
T PRK03545 13 TLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQV--GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVL 90 (390)
T ss_pred HHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 3333333333333344556799999999999988 99999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHh
Q 015968 188 CATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLA 267 (397)
Q Consensus 188 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~ 267 (397)
+++++|++.++++|+++|++.+..++...+++.|++|+++|+++++++..+..+|.+++|.+++.+.+. .|||+.|++.
T Consensus 91 ~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~ 169 (390)
T PRK03545 91 SALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY-LGWRTTFLAI 169 (390)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-hcHHHHHHHH
Confidence 999999999999999999999888898899999999999999999999999999999999999988766 7999999998
Q ss_pred HHHHHHHHHH-hccCCCC
Q 015968 268 AIPSILLALG-MGLSPES 284 (397)
Q Consensus 268 ~~~~~~~~~~-~~~~~e~ 284 (397)
+++.++..+. ..++||.
T Consensus 170 ~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 170 GGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 8877665544 3335554
No 20
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.93 E-value=1.8e-23 Score=199.17 Aligned_cols=180 Identities=17% Similarity=0.214 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH
Q 015968 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 182 (397)
......+.+..+...+....+.+.+|.+.+++|.+.+.. ++..+++.++++++++++|+++||+|||++++.+.++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 92 (413)
T PRK15403 15 LFFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLA--PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFT 92 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHH
Confidence 334444456666666777788889999999999998888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHH
Q 015968 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (397)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 262 (397)
++.++++++++++.++++|+++|++.+...+....++.|++++++|+++++++..+..+|..+||++++.+.+. .+||+
T Consensus 93 ~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-~gw~~ 171 (413)
T PRK15403 93 LACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-VHWKV 171 (413)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHH
Confidence 99999999999999999999999998876777778899999999999999999999999999999999888765 79999
Q ss_pred HHHHhHHHHHHHHHH-hccCCCCh
Q 015968 263 MFGLAAIPSILLALG-MGLSPESP 285 (397)
Q Consensus 263 ~~~~~~~~~~~~~~~-~~~~~e~~ 285 (397)
.|++.+++.++..+. .+++||++
T Consensus 172 ~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999988887666554 44578764
No 21
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=1.5e-23 Score=198.63 Aligned_cols=288 Identities=21% Similarity=0.313 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
.+..+..+++..+..+++.....+..|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+++..+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL--GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH--HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 3445555556666666667777778999999999998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchH
Q 015968 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
+++.++..+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+. .+|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~g~~ 171 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-FGWR 171 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-ccce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988876 7999
Q ss_pred HHHHHhHHHHHH-HHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchh
Q 015968 262 TMFGLAAIPSIL-LALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYW 340 (397)
Q Consensus 262 ~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (397)
+.|++.+++.++ .++..+++||++++..++ +.++..+..++.......+.+ ++..+..++.+..+..++.+++.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ-SALPEQKATQGTKRSVFKALFQGKTA 249 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc-ccccccccccchhhHHHHHHhcchhH
Confidence 999888655544 444556678887655443 222222222221111000000 00000000000111112223333333
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 341 KVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
+........ .+......+....|.|++.++.|++.. .....+..++.+++.+++
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 305 (398)
T TIGR00895 250 RITVLLWLL-YFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIF 305 (398)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322222 223333456677788888888888765 444555556666665543
No 22
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6.7e-26 Score=206.00 Aligned_cols=186 Identities=21% Similarity=0.288 Sum_probs=170.8
Q ss_pred cchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhh
Q 015968 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDA 178 (397)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 178 (397)
.+..+..+.++++...+++.+...+....+.+++.+|++++.. |++.+.+.+.+.+++|++|+++||+.||.++.+|.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~--Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSEL--GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhc--cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHH
Confidence 3444567778889999999999999999999999999999888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 015968 179 VPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (397)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 258 (397)
.+|.++.+++++++.+|+++++|.+.|+|.+.+.++++.+++|.||..+|++++++++.+..+|..+|.+++..+.+...
T Consensus 106 ~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 106 FIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred chHHHHHHhHHHHHHHHHHhcc-CCCChH
Q 015968 259 WWRTMFGLAAIPSILLALGMGL-SPESPR 286 (397)
Q Consensus 259 ~w~~~~~~~~~~~~~~~~~~~~-~~e~~~ 286 (397)
.|||.|+..+++++++.++.++ .+|+++
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 6999999999999887766554 555543
No 23
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=1.4e-24 Score=210.25 Aligned_cols=185 Identities=16% Similarity=0.078 Sum_probs=156.4
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhH
Q 015968 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV 179 (397)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 179 (397)
+..+.++.++++..+..+.+...++...|.+.+++|++..+. |++.+.+.+++.+++++.|+++||+|||+++.++.+
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTEL--GMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 345666777777777778888888889999999999999888 999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHh-----hchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 180 PLAAGAFLCAT-----AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 180 ~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
+++++.++.++ +++++.++++|++.|++.+...+....+++|++|+++||++++++..+..+|.++++++...+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 88877766654 5899999999999999999999999999999999999999999999999999999988876554
Q ss_pred CC--CcchHHHHHHhHHHHHHHHHH-hccCCCChH
Q 015968 255 GN--PLWWRTMFGLAAIPSILLALG-MGLSPESPR 286 (397)
Q Consensus 255 ~~--~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~~ 286 (397)
.. ..+||..|.+.+++.++..++ +++.+++|+
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 42 136999988888777655544 344566654
No 24
>TIGR00898 2A0119 cation transport protein.
Probab=99.92 E-value=3.7e-24 Score=209.64 Aligned_cols=222 Identities=24% Similarity=0.403 Sum_probs=178.1
Q ss_pred hhHHHHHHHhCCC---chhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHH
Q 015968 125 GALEYLAKDLGIA---ENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGR 201 (397)
Q Consensus 125 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (397)
...+.+.+|++++ ..+. +++.+++.+++.++.+++|+++||+|||++++++.++.+++.++++++++++.++++|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~--~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKV--DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHH--HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 3567788999998 6666 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccC
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 281 (397)
++.|++.+...+....++.|++|+++|+.+.++...+..+|.++++++++.+. +||+.|++.+++.++..+..+++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987663 49999999988887777777889
Q ss_pred CCChHHHHHcCCHHHHHHHHHHHhCCcch--HHHHHHHH-hhcCCCCCCccchhhhhccchhHHHHHHHHHHHH
Q 015968 282 PESPRWLFQQGKKSEAEKSIQTLYGKERV--SEVMLDLT-NAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLF 352 (397)
Q Consensus 282 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
||+|+|+..+++.+++.+.+++....+.. ..+..+.. ++..+.++++.+++++++++..+...+...+.++
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 99999999888888877776665432211 11111111 1111111224577888888766666555544444
No 25
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=8e-24 Score=205.13 Aligned_cols=276 Identities=14% Similarity=0.048 Sum_probs=199.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHH----------------------HhCCCchhhHHHHHHHHHHHHHH
Q 015968 98 SSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAK----------------------DLGIAENTVLQGWIVSSLLAGAT 155 (397)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~ 155 (397)
..+.++.++.+++++..+.+.+...++...+.+.+ +++++..+. |++.+.+.+++.
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~ 90 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQ--GLILSSHFYGQI 90 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHh--hHHHHHHHHHHH
Confidence 34445667777777777778888887777777766 788888877 999999999999
Q ss_pred HHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh--chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhh
Q 015968 156 VGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA--QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGS 233 (397)
Q Consensus 156 i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 233 (397)
+++++.|+++||+|||+++.++.++++++.+++.++ .+++.+++.|+++|++.+..++....++.|++|+++|+++++
T Consensus 91 ~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 91 IIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 999999999999999999999999999988876543 568889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhcc-CCCChHHHHHcCCHHHHHHHHHHHhCCcchHH
Q 015968 234 VNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSE 312 (397)
Q Consensus 234 ~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (397)
+...+..+|.++++++++.+.+...+||+.|++.+++.++..+++++ .+|+|+... +.++++. +..
T Consensus 171 ~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~-~~i----------- 237 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFEK-KYI----------- 237 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHHH-HHH-----------
Confidence 99999999999999999888765249999999998888766655544 456554211 1111111 000
Q ss_pred HHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHH
Q 015968 313 VMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANV 389 (397)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~ 389 (397)
++..++.+++.+++..++++++++..+...+ ..+....+.+.+..|+|.++++ .|++.. +....+..++.+
T Consensus 238 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~ 311 (465)
T TIGR00894 238 --NSSLQGQKGSTRQSLPIKAIPKSLPVWAIWF----AIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAW 311 (465)
T ss_pred --HhhcccccCCCCCCCCHHHHhcCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHH
Confidence 0000000111122345777777755444333 3334444567788899999876 588764 334444455555
Q ss_pred Hhhhh
Q 015968 390 FGNYS 394 (397)
Q Consensus 390 ~g~~~ 394 (397)
++.++
T Consensus 312 i~~~~ 316 (465)
T TIGR00894 312 LCSIF 316 (465)
T ss_pred HHHHH
Confidence 55444
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=5e-23 Score=195.01 Aligned_cols=250 Identities=13% Similarity=0.124 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
.|.+...++.+.+.... ....++..|.+++|+|++..+. +++.+.+.+++.+++++.|+++||+|||+++..+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~ 84 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVA--ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLI 84 (393)
T ss_pred HHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHH
Confidence 34444444444444333 3556789999999999999988 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchH
Q 015968 182 AAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
+++.++++++++++.+++.|+++|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++.+.++..+||
T Consensus 85 ~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~ 163 (393)
T PRK09705 85 AVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWY 163 (393)
T ss_pred HHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 9999999999999999999999999999999999999999997 779999999999999999999999888777645899
Q ss_pred HHHHHhHHHHHHHHHHhccC-CCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchh
Q 015968 262 TMFGLAAIPSILLALGMGLS-PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYW 340 (397)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (397)
+.+.+.++..++.++..++. ++.|+ .+ + + ++.+..+.++++..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----------------------------~-~--~~~~~~~~l~~~~~ 207 (393)
T PRK09705 164 QTLAWWALPAVVALFAWWWQSAREVA-----SS----------------------------H-K--TTTTPVRVVFTPRA 207 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc-----cc----------------------------c-C--CCcCCcccccCHhH
Confidence 98876665544433332221 11110 00 0 0 00111233344333
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 341 KVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
+...+.. +....++..+..|.|.++++.|++.. .....+.+++.++|.++.
T Consensus 208 ~~l~~~~----~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~ 260 (393)
T PRK09705 208 WTLGVYF----GLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLM 260 (393)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Confidence 3322222 22223456777889999998888765 455666777777776654
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=7.3e-23 Score=197.48 Aligned_cols=182 Identities=18% Similarity=0.176 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
.|.++..+++.......+...++...|++.++ |++..+. +++.+.+.++++++++++|+++||+|||++++++.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~--g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDL--GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHH--HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 34444444455555555544556678888888 9999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHH-HHHHHHhhhcCCC
Q 015968 182 AAGAFLCATA----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGI-LAALVAGLPLAGN 256 (397)
Q Consensus 182 ~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~ 256 (397)
+++.++++++ .+++.+++.|++.|++.+..++.....+.|++|+++|++++++++.+..+|. +.+++++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 9999888775 3788899999999999998888888889999999999999999999998886 5566654333333
Q ss_pred CcchHHHHHHhHHHHHHH-HHHhccCCCChHH
Q 015968 257 PLWWRTMFGLAAIPSILL-ALGMGLSPESPRW 287 (397)
Q Consensus 257 ~~~w~~~~~~~~~~~~~~-~~~~~~~~e~~~~ 287 (397)
.+||+.|++.+++.++. ++..+++||+|+.
T Consensus 184 -~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 184 -NDWHAALYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHccCCHhh
Confidence 58999999988776554 4455667887653
No 28
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=2.6e-22 Score=194.57 Aligned_cols=168 Identities=13% Similarity=0.117 Sum_probs=135.7
Q ss_pred HHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh
Q 015968 112 GAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA 191 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 191 (397)
..+...+......+..|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++
T Consensus 44 ~~~~~~~~~~~~~~~~~~l~~~~gls~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 121 (476)
T PLN00028 44 SFFTCFVSTFAAAPLLPIIRDNLNLTKSDI--GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV 121 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence 333334444455678899999999999888 899999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC----C----CCcchHHH
Q 015968 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA----G----NPLWWRTM 263 (397)
Q Consensus 192 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~----~----~~~~w~~~ 263 (397)
++++.++++|++.|++.+... ....+++|++|+++|+.++++.+.+..+|..+++.+.+.+. . ...|||+.
T Consensus 122 ~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 122 SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 999999999999999887654 45568899999999999999998777777666655543331 1 12589999
Q ss_pred HHHhHHHHHHHHHHhccCC
Q 015968 264 FGLAAIPSILLALGMGLSP 282 (397)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~ 282 (397)
|++.+++.++..+..++++
T Consensus 201 f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999888876665555544
No 29
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=4e-23 Score=195.32 Aligned_cols=261 Identities=18% Similarity=0.143 Sum_probs=186.6
Q ss_pred HHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHH
Q 015968 116 FGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQ 195 (397)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 195 (397)
..++...++...|.+.+++|.+..+. +++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T TIGR00893 6 NYLDRANLSFAAPMLQEDLGLSAAQY--GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYV 83 (399)
T ss_pred HHHHHHhhhHhHHHHHHhhCCChhhH--HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHH
Confidence 34455566778899999999999888 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHH
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 275 (397)
.++++|++.|++.+...+....++.|++|+++|++++++......+|.++++.+++.+.+. .+||+.|++.+++.++..
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-FSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987766 789999998888776655
Q ss_pred HHh-ccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHH
Q 015968 276 LGM-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQ 354 (397)
Q Consensus 276 ~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
+.. ++.||+++... ..+.++.....++.. ...++.++++++....++.++++..+...+... ..
T Consensus 163 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 227 (399)
T TIGR00893 163 VLWLKFIPDPPQKAK-WLTEEEKYIVVGGLL----------AEQQGKGPSTPKKYQIKELLKDRRVWGLALGQF----LV 227 (399)
T ss_pred HHhhheecCCCCccc-cCCHHHHhhcchhhc----------cccccccccCCCccchHHHhcCHHHHHHHHHHH----HH
Confidence 544 34566543110 001111000000000 000011111122334566666654443333322 22
Q ss_pred hhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhh
Q 015968 355 LAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYS 394 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~ 394 (397)
......+..|.|.++++ .|++.. .......+++.+++.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (399)
T TIGR00893 228 NIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMIL 270 (399)
T ss_pred HhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHH
Confidence 23355667778888765 577654 34444555555555544
No 30
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.5e-23 Score=199.61 Aligned_cols=280 Identities=16% Similarity=0.144 Sum_probs=204.0
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhchh-hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhh
Q 015968 100 GVVLPFVGVACLGAILFGYHLGVVNG-ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDA 178 (397)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 178 (397)
+-.+.++..++...+....+...++. .+..+.+|.+...++. +++.++++++++++.++++.+.||++-.+.+....
T Consensus 41 K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l--~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~ 118 (495)
T KOG2533|consen 41 KLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQL--GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG 118 (495)
T ss_pred HHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhh--hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH
Confidence 33445555556666666665554322 2233558888888888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC---
Q 015968 179 VPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG--- 255 (397)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--- 255 (397)
+++++..++....+|++.+++.|++.|+.++..+|....+++.||.+++|+..++++.+...+|.++|.+++..+..
T Consensus 119 ~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 119 ILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 99999998888899999999999999999999999999999999999999999999999999999999999988532
Q ss_pred --CCcchHHHHHHhHHHHHHHHHH-hccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchh
Q 015968 256 --NPLWWRTMFGLAAIPSILLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWF 332 (397)
Q Consensus 256 --~~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (397)
...||||.|++.+++.++..++ .+++|+.|.... -.+.+|..-..++. ++......+++.+...++
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~-fl~~~ek~~~~~~~----------~~~~~~~~~~~~~~~~~~ 267 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAW-FLTDEEKELVVERL----------RESPSGGIENKFKWKGFK 267 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcc-ccchHHHHHHHHHH----------HhccCCCcccccCHHHHH
Confidence 2378999999999998777654 556899886220 00111100001110 011111111113345567
Q ss_pred hhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhhcc
Q 015968 333 DLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYSIS 396 (397)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~~~ 396 (397)
+.++++..|...+..+.. ....+.+.+|+|.++++ .|++.. ........++++++.++++
T Consensus 268 ~a~~dp~vw~~~l~~~~~----~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag 330 (495)
T KOG2533|consen 268 EALKDPGVWPFSLCYFFL----KLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAG 330 (495)
T ss_pred HHHhchhHHHHHHHHHHH----hhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHH
Confidence 777776666655444333 33367799999999998 457654 5566677777777777654
No 31
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.91 E-value=7.6e-28 Score=232.40 Aligned_cols=286 Identities=37% Similarity=0.640 Sum_probs=223.0
Q ss_pred HHHHHHHHHhHhhchhhHHHHH--HHhCCCch-------hhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHH
Q 015968 110 CLGAILFGYHLGVVNGALEYLA--KDLGIAEN-------TVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (397)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 180 (397)
.++.+..+++...++...+... ..+..+.. +...+++.+...+|..+|.+++|.++||+|||+.++++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4455777777777666555444 22222221 12347899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc---hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC-
Q 015968 181 LAAGAFLCATAQ---SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN- 256 (397)
Q Consensus 181 ~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~- 256 (397)
..++.++.++++ +++.+.++|++.|++.|+..+....++.|..|+++|+...++.+.+..+|.+++.+++..+...
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999888887655332
Q ss_pred -CcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhh
Q 015968 257 -PLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLF 335 (397)
Q Consensus 257 -~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (397)
..+||+.+++..+++++..+..+++||+|+|+..+++.+++++.+++.++.+..+++.++..++.++.++++..+++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 1359999999999988887778889999999999999999999888876664444444333333333333346788888
Q ss_pred ccc-hhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHhhhhc
Q 015968 336 SSR-YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGNYSI 395 (397)
Q Consensus 336 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 395 (397)
+.+ +++++.+...+..+.++.+.+.+.+|.+.++++.|.+.......+.++..+++.+++
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLA 306 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 875 366777777777777788888888999999988888776344445555555555443
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.4e-22 Score=197.62 Aligned_cols=178 Identities=26% Similarity=0.375 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG 184 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 184 (397)
++..++++.++..++....+...|.+.+++|.+..+. +|+.+.+.++..++.++.|+++||+|||++++++.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQV--QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh--hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3455666777778888888889999999999998888 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHH
Q 015968 185 AFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (397)
Q Consensus 185 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~ 264 (397)
.++++++++++.+++.|+++|++.+...+....++.|++|+++|+++++++..+..+|..++|.+++.+.+. .+||+.|
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~w~~~f 159 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-YHWRWIF 159 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC-cCceehh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876 8999999
Q ss_pred HHhHHHHHHHHHH-hccCCCCh
Q 015968 265 GLAAIPSILLALG-MGLSPESP 285 (397)
Q Consensus 265 ~~~~~~~~~~~~~-~~~~~e~~ 285 (397)
++.+++.++..++ .+++||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCcc
Confidence 9988777655543 34456643
No 33
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=9.3e-22 Score=186.53 Aligned_cols=173 Identities=13% Similarity=0.128 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG 184 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 184 (397)
+...+++..+..+......+...|.+.+++|++..+. +++.+.+.+++.+++++.|+++||+|||++++.+.++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSM--SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4445556666666767777888999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHH
Q 015968 185 AFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (397)
Q Consensus 185 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~ 264 (397)
.++++++++++.+++.|++.|++.+...+....++.|++|+++|+.+++..+....+|..++|.+.+.+.....+||+.|
T Consensus 86 ~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f 165 (394)
T PRK03699 86 VAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVY 165 (394)
T ss_pred HHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 99999999999999999999999998888889999999999999999999888888998898888877655447999999
Q ss_pred HHhHHHHHHHHHHhc
Q 015968 265 GLAAIPSILLALGMG 279 (397)
Q Consensus 265 ~~~~~~~~~~~~~~~ 279 (397)
++.+++.++..++.+
T Consensus 166 ~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 166 ACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988877765554433
No 34
>PRK15075 citrate-proton symporter; Provisional
Probab=99.90 E-value=8.5e-22 Score=189.13 Aligned_cols=164 Identities=20% Similarity=0.263 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHH-HHHH-----HHHHHHHHHhhhhhhcccchHHHHHHhh
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWI-VSSL-----LAGATVGSFTGGSLADKFGRTRTFQLDA 178 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 178 (397)
....++++.++.+++...++...|.+.++++.++.+. +.+ .+.. .++..+++++.|+++||+|||++++.+.
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 93 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEF--ASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTL 93 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch--HHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHH
Confidence 5677788999999999999999999999999887664 332 2222 2233578899999999999999999999
Q ss_pred HHHHHHHHHHHhhchHH--------HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHh
Q 015968 179 VPLAAGAFLCATAQSVQ--------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAG 250 (397)
Q Consensus 179 ~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 250 (397)
++++++.++++++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.++
T Consensus 94 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g 173 (434)
T PRK15075 94 SIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLG 173 (434)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999877 4689999999999999998899999999999999999999888888877777776
Q ss_pred hhcCC-------CCcchHHHHHHhHHH
Q 015968 251 LPLAG-------NPLWWRTMFGLAAIP 270 (397)
Q Consensus 251 ~~l~~-------~~~~w~~~~~~~~~~ 270 (397)
+.+.. ...|||+.|++..+.
T Consensus 174 ~~l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 174 YLLNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHHHhCCHHHHhccchHHHHHHHHHH
Confidence 65421 237899999875443
No 35
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=6.2e-22 Score=186.94 Aligned_cols=173 Identities=21% Similarity=0.226 Sum_probs=151.9
Q ss_pred HHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHH
Q 015968 109 ACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (397)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~ 188 (397)
+.+..+..+.......+..|.+++++|.+..+. +++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 8 LALGTFGLGMAEFGIMGVLTELAHDVGISIPAA--GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHH--hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 344555555656666778899999999999888 999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhH
Q 015968 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAA 268 (397)
Q Consensus 189 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~ 268 (397)
+++++++.+++.|++.|++.+...+....++.|++++++|+++++++..+..+|..+++.+++.+.+. .+||+.|++.+
T Consensus 86 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~ 164 (382)
T PRK10091 86 TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE-FSWRYTFLLIA 164 (382)
T ss_pred HHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh-ccHHHHHHHHH
Confidence 99999999999999999999988888888999999999999999999999999999999999888776 79999999988
Q ss_pred HHHHHHHHH-hccCCCC
Q 015968 269 IPSILLALG-MGLSPES 284 (397)
Q Consensus 269 ~~~~~~~~~-~~~~~e~ 284 (397)
++.++..+. .+++||.
T Consensus 165 ~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 165 VFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 876655443 3446765
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=2.2e-22 Score=189.18 Aligned_cols=159 Identities=21% Similarity=0.150 Sum_probs=137.8
Q ss_pred hchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHH
Q 015968 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGR 201 (397)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (397)
..++..|.+.+++|++..+. +++.+++.+++.+++++.|+++||+|||++++.+.++.+++.++++++++++.++++|
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVGVTAV--AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred hhhhHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc-c
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG-L 280 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~-~ 280 (397)
++.|++.+..++....++.+++| ++|+++.++...+..+|.++++.+.+.+.+. .+||+.|++.+++.++..+..+ +
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL-EGVPAAFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888888888899997 5699999999999999987655555555544 7899999998888766655443 3
Q ss_pred CCCC
Q 015968 281 SPES 284 (397)
Q Consensus 281 ~~e~ 284 (397)
++++
T Consensus 177 ~~~~ 180 (377)
T TIGR00890 177 IGYP 180 (377)
T ss_pred eecC
Confidence 4443
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=6.4e-22 Score=186.93 Aligned_cols=169 Identities=22% Similarity=0.297 Sum_probs=149.9
Q ss_pred HHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhch
Q 015968 114 ILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS 193 (397)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~ 193 (397)
+........+.+..|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+++..+.++.+++.++++++++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 92 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADLSTPASIV--QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNN 92 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 3344556677778899999999999888 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~ 273 (397)
++.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.+. .+||+.|++.+++.++
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~~ 171 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-LSWHAIFAFLSLAGIL 171 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988776 7899999988877765
Q ss_pred HHHH-hccCCCCh
Q 015968 274 LALG-MGLSPESP 285 (397)
Q Consensus 274 ~~~~-~~~~~e~~ 285 (397)
..+. .++.||++
T Consensus 172 ~~~~~~~~~~~~~ 184 (385)
T TIGR00710 172 LSALIFFILPETL 184 (385)
T ss_pred HHHHHHHhCCCCC
Confidence 5544 34456653
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=1.1e-21 Score=186.86 Aligned_cols=184 Identities=21% Similarity=0.192 Sum_probs=160.7
Q ss_pred cchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhh
Q 015968 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDA 178 (397)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 178 (397)
.++.+.....+.+..+...+....+.+..+.+.+++|.+..+. ++..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWV--PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 3566777777788888877777888888899999999998888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 015968 179 VPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (397)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 258 (397)
++.+++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|.+.+++......+|..++|.+++.+.+. .
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~ 164 (406)
T PRK15402 86 AFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-L 164 (406)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-c
Confidence 999999999999999999999999999999888888889999999999999999998888888999999999888776 7
Q ss_pred chHHHHHHhHHHHHHHHHHh-ccCCCCh
Q 015968 259 WWRTMFGLAAIPSILLALGM-GLSPESP 285 (397)
Q Consensus 259 ~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 285 (397)
+||+.|++.+++.++..+.. +..||++
T Consensus 165 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 165 PWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999998888776655533 3467664
No 39
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=2.8e-21 Score=188.99 Aligned_cols=184 Identities=20% Similarity=0.333 Sum_probs=161.1
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHH
Q 015968 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (397)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 180 (397)
+.+..+..+++..++..++....++..|.+.+++|++..+. +++.+.+.+++.++.++.|+++||+|||++++.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQA--ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34456666777778888888888889999999999999888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcch
Q 015968 181 LAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (397)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 260 (397)
.+++.++++++++++.+++.|++.|++.+..++....++.|++|+++|++++++...+..+|..+++.+++.+.+. .+|
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV-WGW 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988876 899
Q ss_pred HHHHHHhHHHHHHHHHHhccCCCChHH
Q 015968 261 RTMFGLAAIPSILLALGMGLSPESPRW 287 (397)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~e~~~~ 287 (397)
|+.|++.++..++.++....+||++++
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 999987555444444444456776554
No 40
>PRK09952 shikimate transporter; Provisional
Probab=99.90 E-value=2.7e-21 Score=185.71 Aligned_cols=181 Identities=16% Similarity=0.153 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHHHHHhHhhchhhHH-HHHHHh--CCCchhhHHHHHH-----HHHHHHHHHHHHhhhhhhcccchHHHHH
Q 015968 104 PFVGVACLGAILFGYHLGVVNGALE-YLAKDL--GIAENTVLQGWIV-----SSLLAGATVGSFTGGSLADKFGRTRTFQ 175 (397)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~i~~~~~g~l~d~~Grr~~l~ 175 (397)
..+...+++.+..+++...++...+ .+.+++ +.+... +++. ++.+++..+++++.|+++||+|||++++
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 3566667788888898888877766 455555 666542 4443 3445667789999999999999999999
Q ss_pred HhhHHHHHHHHHHHhhchHH--------HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHH
Q 015968 176 LDAVPLAAGAFLCATAQSVQ--------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (397)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 247 (397)
++.++++++++++++++++. .++++|+++|++.|+.++....++.|++|+++|++..+....+..+|.+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987 5889999999999999999999999999999999999999999999988887
Q ss_pred HHhhhcCC-------CCcchHHHHHHhHHHHHHHHHHhccCCCChHH
Q 015968 248 VAGLPLAG-------NPLWWRTMFGLAAIPSILLALGMGLSPESPRW 287 (397)
Q Consensus 248 ~~~~~l~~-------~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 287 (397)
.+...+.. ...|||+.|++.+++.++..++....||+|++
T Consensus 179 ~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~ 225 (438)
T PRK09952 179 GLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 66554431 12699999998877765544444456777654
No 41
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.90 E-value=7.9e-22 Score=189.58 Aligned_cols=274 Identities=14% Similarity=0.073 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
.+..+..+.+.....+.....+....|.+++ +|++.++. +++.+++.++..++.++.|+++||+|||++++.+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGEL--GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHh--HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3444555555555555555555566787775 59999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC
Q 015968 182 AAGAFLCATA----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP 257 (397)
Q Consensus 182 ~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 257 (397)
+++.+++++. ++++.+.+.|++.|++.+..++....++.|++|+++|++++++++.+..+|..+++.+.+......
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9988877654 467788899999999999988888899999999999999999999999999988877665443333
Q ss_pred cchHHHHHHhHHHHHHHH-HHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCcc-chhhhh
Q 015968 258 LWWRTMFGLAAIPSILLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEA-GWFDLF 335 (397)
Q Consensus 258 ~~w~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 335 (397)
.+||+.|++.+++.++.. +..+++||+|+....++. ++ . +.+.+.+ ..++.+.+.+.+. ..+.++
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~-~------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 248 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPI-EE-Y------RNDYPDD-----YNEKAEQELTAKEIFMQYVL 248 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCc-hh-c------ccccccc-----cccccccccchHHHHHHHHc
Confidence 689999999888876654 445557877653210000 00 0 0000000 0000000000000 112345
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 336 SSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
+++..+...+...+. ....+.+..|.|.++++ .|++.. .....+.++.+++|.+++
T Consensus 249 ~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 307 (438)
T TIGR00712 249 PNKLLWYIAIANVFV----YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLC 307 (438)
T ss_pred cCchHHHHHHHHHHH----HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 665555443332222 22345677889999987 587764 444555666666666554
No 42
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.5e-21 Score=185.57 Aligned_cols=236 Identities=19% Similarity=0.239 Sum_probs=182.5
Q ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc--hHHHHHHHHHHHHHhhh
Q 015968 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGRVLAGIGIG 209 (397)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~ 209 (397)
.+++.+..+. +++.+.++.|+.+++++.|++.||+|.|+++..+.++.++++++..++. +++.+++.|+++|++.|
T Consensus 66 ~~~~ws~~~k--~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 66 GEYDWSSTEK--GLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG 143 (466)
T ss_pred ceecCCHHHH--HHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence 3577777777 9999999999999999999999999999999999999999999887763 55678999999999999
Q ss_pred hhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhcc-CCCChHHH
Q 015968 210 ISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL-SPESPRWL 288 (397)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~e~~~~~ 288 (397)
..++....+.+.|.|++||++..++..++..+|.+++-.++|.+.+...||+++|++.++++++..+++++ ..|+|..+
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 99999999999999999999999999999999999999999999887789999999999999887766544 56666531
Q ss_pred HHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhc---CCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhH
Q 015968 289 FQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAG---QGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYS 365 (397)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
+.-..+|. +.+++.. +.+++.+.+|+++++++-.|.+ .+..+....+++.+..|+
T Consensus 224 -~~is~~El-----------------~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai----~~~~f~~~~~~~~l~~y~ 281 (466)
T KOG2532|consen 224 -PNISEKEL-----------------KYIEKGKSEAHVKKKPPVPYKAILTSPPVWAI----WISAFGGNWGFYLLLTYL 281 (466)
T ss_pred -CCCCHHHH-----------------HHHHhcccccccCCCCCCCHHHHHcCHHHHHH----HHHHHHHHHHHHHHHHHh
Confidence 11111111 1111111 1111246789999999554444 444455555688999999
Q ss_pred HHHHHH-cCCChh--HHHHHHHHHHHHHh
Q 015968 366 TSVFRS-VGIESD--VAASALVGAANVFG 391 (397)
Q Consensus 366 ~~~~~~-~g~~~~--~~~~~~~~~~~~~g 391 (397)
|.|+++ +|++.. +....+..+..++.
T Consensus 282 PtY~~~VL~f~v~~~G~~salP~l~~~~~ 310 (466)
T KOG2532|consen 282 PTYLKEVLGFDVRETGFLSALPFLAMAIV 310 (466)
T ss_pred hHHHHHHhCCChhhhhHHHHHHHHHHHHH
Confidence 999997 577754 44444444444443
No 43
>PRK11043 putative transporter; Provisional
Probab=99.90 E-value=2.5e-21 Score=184.10 Aligned_cols=166 Identities=18% Similarity=0.213 Sum_probs=145.7
Q ss_pred HHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHH
Q 015968 116 FGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQ 195 (397)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 195 (397)
..+....+.+..|.+.+++|.+..+. +++.+++.+++.++++++|+++||+|||++++.+.++.+++.+++.++++++
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 95 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAV--SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAA 95 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 33445666777888999999999888 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHH
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 275 (397)
.+++.|++.|++.+...+...+++.|++++++++...+.......+|..++|.+++.+.+. .+||+.|++.+++.++..
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 96 QLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-FGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHH
Confidence 9999999999998888777788999999998888888988888899999999999988876 799999998888777666
Q ss_pred HHhccCCCC
Q 015968 276 LGMGLSPES 284 (397)
Q Consensus 276 ~~~~~~~e~ 284 (397)
+..++++|+
T Consensus 175 ~~~~~~~~~ 183 (401)
T PRK11043 175 LPTLRLKPS 183 (401)
T ss_pred HHHHHcCCC
Confidence 655555554
No 44
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=7.5e-23 Score=192.48 Aligned_cols=262 Identities=15% Similarity=0.127 Sum_probs=184.1
Q ss_pred HHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhch
Q 015968 114 ILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS 193 (397)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~ 193 (397)
+...++...++...|.+.+++|++..+. +++.+++.++..++.++.|+++||+|||++++++.++.+++.++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLVEEIGLSKTDL--GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred hHHHHhHHhhhhhhHHHHHHhCCCHhHH--HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 3444556666778899999999999888 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHH-HHhhhcCCCCcchHHHHHHhHHHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL-VAGLPLAGNPLWWRTMFGLAAIPSI 272 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~w~~~~~~~~~~~~ 272 (397)
++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ ++++.+... .+||+.|++.+++.+
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWVFIVPGIIAI 161 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 566655554 789999998887775
Q ss_pred HHH-HHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHH
Q 015968 273 LLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFL 351 (397)
Q Consensus 273 ~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
+.. +..++.+|+++....+...++ ..+ +.++ +.+++.++.+..+..++++++++..+.+.+...+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEM--------PNE-EPDG---DAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVY 229 (379)
T ss_pred HHHHHHheeeCCCccccccCccccC--------ccc-cccc---ccccccccccchHHHHHHHHhcchHHHHHHHHHHHH
Confidence 544 444556666542110000000 000 0000 000000011111223455566655444433333222
Q ss_pred HHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhh
Q 015968 352 FQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYS 394 (397)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~ 394 (397)
.....+..|.|.++++ .|++.. .......+++.++|.++
T Consensus 230 ----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 271 (379)
T TIGR00881 230 ----VVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLL 271 (379)
T ss_pred ----HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHH
Confidence 2245566778888765 587764 44445555555655554
No 45
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=7e-22 Score=194.19 Aligned_cols=204 Identities=27% Similarity=0.309 Sum_probs=165.1
Q ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhh
Q 015968 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGIS 211 (397)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~ 211 (397)
+.+..+.... .+..+++++|..+|++++|+++||+|||++++++.++..++.++.++++|++.+++.|++.|++.++.
T Consensus 111 ~~~c~~~~~~--~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLV--ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHH--HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence 4555555555 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHc
Q 015968 212 SAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQ 291 (397)
Q Consensus 212 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 291 (397)
+.+...+++|++++++|+.++.+ ......++.+++..++++.. +|||.+++..++.++.++..++.||+|+|+..+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 99999999999999999999999 77777777777777777654 799999999999988877777778999999999
Q ss_pred CCHHHHHHHHHHHhCC----cchHHHHHH---HHhhcCCCCCCccchhhhhccchhH
Q 015968 292 GKKSEAEKSIQTLYGK----ERVSEVMLD---LTNAGQGSAEPEAGWFDLFSSRYWK 341 (397)
Q Consensus 292 ~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
++.+++.+.+++.... ...++..+. .+.......+++..+.++++.+..+
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 321 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLR 321 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHH
Confidence 9999888888876432 111111111 1112222223446688888886433
No 46
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=5.5e-22 Score=184.87 Aligned_cols=171 Identities=30% Similarity=0.456 Sum_probs=147.6
Q ss_pred HHHHHHHHhHhhchhhHH-HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH
Q 015968 111 LGAILFGYHLGVVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (397)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~ 189 (397)
+..+...+......+..| .+.+++|.+..+. +++.+++.++..++.++.|+++||+|||++++++.++.+++.++..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQI--GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCH--HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 344445555666677788 8999999999988 9999999999999999999999999999999999999999976666
Q ss_pred hhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHH
Q 015968 190 TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAI 269 (397)
Q Consensus 190 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~ 269 (397)
++++.+.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|++.++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~~~~~~~~~~~~ 159 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-FGWRWAFLISAI 159 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-CHHCCHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc-cccccccccccc
Confidence 7688889999999999999999999999999999999999999999999999999999999999865 789999999998
Q ss_pred HHHHHHHH-hccCCCC
Q 015968 270 PSILLALG-MGLSPES 284 (397)
Q Consensus 270 ~~~~~~~~-~~~~~e~ 284 (397)
+.++..++ .++++++
T Consensus 160 ~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 160 LSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHCCC---
T ss_pred hhhhhhhhHhhhhhhc
Confidence 88777654 3444444
No 47
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.89 E-value=8.7e-22 Score=182.74 Aligned_cols=255 Identities=15% Similarity=0.095 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchh-hHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHH
Q 015968 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENT-VLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (397)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 185 (397)
+++|+..|+.-+ ....+.+.|++.+++|++.++ . |.+.+++..+|+++.++.|+++||+|.|+++.++.+.+++..
T Consensus 30 ~~lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv~--G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 30 LYLCFYGFMAQF-RPGESFITPYLLTVLNFTEETVT--NEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHhc--chHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 334555555444 556677889999999999998 6 999999999999999999999999999999999999999999
Q ss_pred HHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHH
Q 015968 186 FLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFG 265 (397)
Q Consensus 186 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~ 265 (397)
++.++++++..+.+.|++.|++.|+.+ ....++..|+|+++|+++.+++.++..+|.++++++++.+. . .|||+.+.
T Consensus 107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-~gWr~y~~ 183 (511)
T TIGR00806 107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-LGWISYST 183 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-cCchhHHH
Confidence 999999999999999999999999999 88999999999999999999999999999999999998843 3 68987664
Q ss_pred Hh---HHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcC-CCCCCccchhhhhc---cc
Q 015968 266 LA---AIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQ-GSAEPEAGWFDLFS---SR 338 (397)
Q Consensus 266 ~~---~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~ 338 (397)
+. ....++.+++.+++|..++.+.-+++.........+.....+.+. .+..+ .+.+....++.+++ .-
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~ 258 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG-----GKLEDYLGTCRDSFLVRMLSELVTI 258 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCc-----cccchhhhhhhhHHHHHHHHHHHHH
Confidence 43 333355566677888655533222111000000000000000000 00000 00000011122222 23
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHc
Q 015968 339 YWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSV 372 (397)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (397)
+..+.++-+.+++....+|++-+.+|...+.++.
T Consensus 259 y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v 292 (511)
T TIGR00806 259 YRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTL 292 (511)
T ss_pred hcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHc
Confidence 4456666677777777888888889988887765
No 48
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.89 E-value=3.5e-22 Score=198.59 Aligned_cols=176 Identities=14% Similarity=0.136 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH
Q 015968 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 186 (397)
+..++..+...+..+..+..++.++++|+++..+. |++.+.+.++++++.++.+++.||+|||+++.++.++++++.+
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~--G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSS--GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcc--eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 33444555555667777889999999999999988 9999999999999999999999999999999999999999999
Q ss_pred HHHhhc---------------------------------------------------hHHHHHHHHHHHHHhhhhhhhhh
Q 015968 187 LCATAQ---------------------------------------------------SVQTMIIGRVLAGIGIGISSAIV 215 (397)
Q Consensus 187 ~~~~~~---------------------------------------------------~~~~~~~~r~l~G~~~~~~~~~~ 215 (397)
++++.+ .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 887652 25567899999999999999999
Q ss_pred hhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC---------------------cchHHHHHHhHHHHHHH
Q 015968 216 PLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP---------------------LWWRTMFGLAAIPSILL 274 (397)
Q Consensus 216 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------------~~w~~~~~~~~~~~~~~ 274 (397)
.+++.|++|+++|+.++++++.+..+|.++|+++++.+.+.. .+|+..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998876431 13777888888887776
Q ss_pred HHHhccCCCC
Q 015968 275 ALGMGLSPES 284 (397)
Q Consensus 275 ~~~~~~~~e~ 284 (397)
.+.++++|++
T Consensus 274 ~v~l~~~p~~ 283 (633)
T TIGR00805 274 SIPFFFFPKA 283 (633)
T ss_pred HHHHHhCccc
Confidence 6666666655
No 49
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.89 E-value=1.9e-21 Score=182.11 Aligned_cols=165 Identities=12% Similarity=0.022 Sum_probs=144.0
Q ss_pred HHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh
Q 015968 112 GAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA 191 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 191 (397)
..++..+.........|.+..+++.+..+. +++.+++.++..++.+++|+++||+|||++++.+.++.+++.++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVLAGTGSASVL--SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555667788888999888887 999999999999999999999999999999999999998888888777
Q ss_pred c-----hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHH
Q 015968 192 Q-----SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (397)
Q Consensus 192 ~-----~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~ 266 (397)
. +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|++
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~g~~~~~~~ 163 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-LGIKWAIWV 163 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHH
Confidence 7 9999999999999999999999999999999999999999999999999999999999988776 799999988
Q ss_pred hHHHHHHHHHHhc
Q 015968 267 AAIPSILLALGMG 279 (397)
Q Consensus 267 ~~~~~~~~~~~~~ 279 (397)
.++..++..+..+
T Consensus 164 ~~~~~~~~~~~~~ 176 (365)
T TIGR00900 164 DAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 8776655544443
No 50
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.89 E-value=4.6e-21 Score=179.94 Aligned_cols=171 Identities=25% Similarity=0.234 Sum_probs=135.4
Q ss_pred HHHHHHHhHhhchhhHH-HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh
Q 015968 112 GAILFGYHLGVVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT 190 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~ 190 (397)
+.+..........+..| .+++++|++..+. +++.+++.++++++++++|+++||+|||++++++.++.+++.+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~ 86 (366)
T TIGR00886 9 GFFLSFSVWFAFSPLAVQMIKDDLGLSTAQL--GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL 86 (366)
T ss_pred HHHHHHHHHHHhHHhhhHHHHHHhCCCHHHh--hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 33333444556677888 4999999999888 99999999999999999999999999999999999999999999999
Q ss_pred hc-hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC---------CCcch
Q 015968 191 AQ-SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG---------NPLWW 260 (397)
Q Consensus 191 ~~-~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~~~w 260 (397)
++ +++.+++.|++.|++.+ .+.....+++|++|+++|++++++...+..+|..+++.+++.+.. ...+|
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w 165 (366)
T TIGR00886 87 AVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAW 165 (366)
T ss_pred HhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 99 99999999999999865 456678899999999999999999987777777776666654432 12489
Q ss_pred HHHHHH-hHHHHHHH-HHHhccCCCCh
Q 015968 261 RTMFGL-AAIPSILL-ALGMGLSPESP 285 (397)
Q Consensus 261 ~~~~~~-~~~~~~~~-~~~~~~~~e~~ 285 (397)
|+.|++ .+++.++. ++..++.+|+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 166 GWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 999944 34444333 33344456654
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=9.2e-21 Score=179.79 Aligned_cols=166 Identities=18% Similarity=0.245 Sum_probs=145.3
Q ss_pred HHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHH
Q 015968 117 GYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQT 196 (397)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 196 (397)
.+....+.+..|.+.+++|.+..+. +++.+.+.+++.++++++|+++||+|||++++.+.++.+++.+++.++++++.
T Consensus 21 ~~~~~~~~p~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (394)
T PRK11652 21 QMAQTIYVPAIADMARDLNVREGAV--QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTV 98 (394)
T ss_pred HHHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 3445566678899999999999888 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH
Q 015968 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 197 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 276 (397)
+++.|++.|++.+...+....+..|.+++++|+.+.++...+..+|..++|.+++.+.+. .+||+.|++.+++.++..+
T Consensus 99 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 99 LIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-FGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHHHHHH
Confidence 999999999998888788888899999999999999999999999999999999988766 7899999988777655443
Q ss_pred -HhccCCCCh
Q 015968 277 -GMGLSPESP 285 (397)
Q Consensus 277 -~~~~~~e~~ 285 (397)
..++.||++
T Consensus 178 ~~~~~~~~~~ 187 (394)
T PRK11652 178 SMARWMPETR 187 (394)
T ss_pred HHHHhCCccC
Confidence 345567754
No 52
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=1.3e-20 Score=178.73 Aligned_cols=165 Identities=23% Similarity=0.292 Sum_probs=145.0
Q ss_pred HhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHH
Q 015968 118 YHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTM 197 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (397)
.......+..|.+.+++|.+..+. ++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++..+++++.+
T Consensus 17 ~~~~~~~~~lp~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~ 94 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNASEAQL--HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLF 94 (392)
T ss_pred HHHHHHhhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 334444568899999999998888 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 198 IIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
++.|++.|++.+...+....++.|++|+++|++++++.+....+|..++|++++.+.+. .+|++.|++.+++.++..++
T Consensus 95 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 95 LAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-FPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cChHHHHHHHHHHHHHHHHH
Confidence 99999999999988888999999999999999999999999999999999999887665 79999999988777655443
Q ss_pred -hccCCCCh
Q 015968 278 -MGLSPESP 285 (397)
Q Consensus 278 -~~~~~e~~ 285 (397)
.+++||++
T Consensus 174 ~~~~~~~~~ 182 (392)
T PRK10473 174 SLFILKETR 182 (392)
T ss_pred HHHHcCCCC
Confidence 44566653
No 53
>PRK10133 L-fucose transporter; Provisional
Probab=99.88 E-value=2.2e-20 Score=179.01 Aligned_cols=147 Identities=18% Similarity=0.222 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG 184 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 184 (397)
.+..+.+..++.++.........|.+++++|++..+. +++.+.+.+++.+++++.|+++||+|||++++++.++++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~--gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA--GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4444455566666777777889999999999999888 99999999999999999999999999999999999999999
Q ss_pred HHHH---HhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 185 AFLC---ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 185 ~~~~---~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
.+++ .++++++.++++|+++|++.|...+....++.|+.++++|...+++.+....+|..+++++++.+
T Consensus 105 ~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 105 AALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9775 46789999999999999999999999999999987777777789999999999999999887654
No 54
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=1.9e-20 Score=176.91 Aligned_cols=220 Identities=10% Similarity=0.006 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHhHhhchhhHHHHHH-HhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH
Q 015968 108 VACLGAILFGYHLGVVNGALEYLAK-DLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 186 (397)
+..++.++........+++.+.+.+ ++|++.++. +++.+++.+++.++.++.|++.||+|.|+++.++.+++.+.++
T Consensus 38 ~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~--g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~ 115 (462)
T PRK15034 38 ISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQL--FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCV 115 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 3344444444456666777787766 899999988 9999999999999999999999999999999999999999999
Q ss_pred HHHhh-----chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC-----C-
Q 015968 187 LCATA-----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA-----G- 255 (397)
Q Consensus 187 ~~~~~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----~- 255 (397)
+.+++ ++++.+++.|++.|++ +..++.....++++||+++||+++|+.....++|..+++++...+. .
T Consensus 116 ~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~ 194 (462)
T PRK15034 116 WLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAF 194 (462)
T ss_pred HHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99887 8999999999999998 7788889999999999999999999997666666665544443221 1
Q ss_pred -----------CCcchHHHHHHhHHHHHHHHHHhcc-CCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCC
Q 015968 256 -----------NPLWWRTMFGLAAIPSILLALGMGL-SPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQG 323 (397)
Q Consensus 256 -----------~~~~w~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (397)
...+||.++++..++.++..++.++ +++.+. .+
T Consensus 195 ~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~-------------------------------- 239 (462)
T PRK15034 195 LGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SR-------------------------------- 239 (462)
T ss_pred hccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cc--------------------------------
Confidence 1245888888877777666555444 333321 00
Q ss_pred CCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH
Q 015968 324 SAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS 371 (397)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (397)
.....+.+.+|++..|.+.+. .+..+.++..+.+|+|+++++
T Consensus 240 --~~~~~~~~vlk~~~~Wllsll----y~~tFG~fvg~s~~lp~~~~~ 281 (462)
T PRK15034 240 --ASIADQLPVLQRLHLWLLSLL----YLATFGSFIGFSAGFAMLAKT 281 (462)
T ss_pred --cCHHHHHHHhCCCchhHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 001123456666655543333 344455567788889988876
No 55
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=6.2e-21 Score=183.96 Aligned_cols=175 Identities=14% Similarity=0.096 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH
Q 015968 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 182 (397)
|.++..+.+...........++...+.+.+++|.+.++. +++.+.+.++..++.++.|+++||+|||++++.+.++.+
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSET--AWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHH--HHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 334444444433333333445667899999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHH-HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchH
Q 015968 183 AGAFLCATAQSVQTMII-GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 183 ~~~~~~~~~~~~~~~~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
+++++++++++++.+++ .|++.|++.+...+....++.++++ ++|++++++.+.+..+|..++|.+++.+.+. .|||
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-~gwr 173 (455)
T TIGR00892 96 LGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES-FGWR 173 (455)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-hChH
Confidence 99999999999988865 4689999988776777788899996 6799999999999999999999998888776 7999
Q ss_pred HHHHHhHHHHHHHHHHhccC
Q 015968 262 TMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~ 281 (397)
+.|++.+++.++..+..+++
T Consensus 174 ~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 174 GSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999988776555444333
No 56
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=5.7e-20 Score=173.53 Aligned_cols=148 Identities=19% Similarity=0.244 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH
Q 015968 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 186 (397)
..+.++.++.....+...+..|.+.+++|.+..+. |++.+.+.+++.+++++.|+++||+|||+++..+.++.+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 9 LLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQV--GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566666777788889999999999998888 9999999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC
Q 015968 187 LCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN 256 (397)
Q Consensus 187 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 256 (397)
+++++++++.++++|++.|++.+...+.....+.+..++++|+++++++..+..+|..+|+.+++.+.+.
T Consensus 87 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 87 GLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999988888878888889999999999999999999999999999988654
No 57
>PRK10504 putative transporter; Provisional
Probab=99.87 E-value=3.9e-20 Score=179.66 Aligned_cols=174 Identities=24% Similarity=0.302 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHH
Q 015968 108 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL 187 (397)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 187 (397)
+++++.++..++...+++..|.+.+++|.+..+. +++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 91 (471)
T PRK10504 14 IVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHM--HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLF 91 (471)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 3445556666667777788999999999998888 89999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHh
Q 015968 188 CATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLA 267 (397)
Q Consensus 188 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~ 267 (397)
++++++++.++++|+++|++.+...+....++.|++|+++|+.+.++......+|..++|.+++.+.+. .+||+.|++.
T Consensus 92 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~-~gw~~~f~~~ 170 (471)
T PRK10504 92 CALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY-ASWHWIFLIN 170 (471)
T ss_pred HHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-ccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998876 7999999988
Q ss_pred HHHHHHHHHHhc-cCCCC
Q 015968 268 AIPSILLALGMG-LSPES 284 (397)
Q Consensus 268 ~~~~~~~~~~~~-~~~e~ 284 (397)
..+.++..+... ..|+.
T Consensus 171 ~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 776655544433 34443
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=1.2e-20 Score=177.85 Aligned_cols=163 Identities=26% Similarity=0.378 Sum_probs=145.7
Q ss_pred HhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHH
Q 015968 120 LGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMII 199 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (397)
...+.+..|.+.+++|++..+. +++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSV--QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 3455678899999999999888 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH-Hh
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL-GM 278 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~-~~ 278 (397)
.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..++|.+++.+.+. .+||+.|++.+++.++..+ ..
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-FSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999899999999999999999999999999999999999999888775 7899999988877766544 34
Q ss_pred ccCCCCh
Q 015968 279 GLSPESP 285 (397)
Q Consensus 279 ~~~~e~~ 285 (397)
+++||++
T Consensus 164 ~~~~~~~ 170 (377)
T PRK11102 164 FFIPETL 170 (377)
T ss_pred HhCCccC
Confidence 5566653
No 59
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.87 E-value=6.9e-20 Score=174.08 Aligned_cols=171 Identities=15% Similarity=0.183 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHH
Q 015968 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (397)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 185 (397)
+.+++...+..++..+...+..|.+++++|++..+. +++.+.+.+++.+++++.|++.||+|||++++++.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~--g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQA--ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 344556666777777787889999999999999888 999999999999999999999999999999999999999998
Q ss_pred HHHHh---hchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC------
Q 015968 186 FLCAT---AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN------ 256 (397)
Q Consensus 186 ~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------ 256 (397)
+++.. .++++.+++.|++.|++.|...+....++.+..|+++|++.+++.+....+|..+++.++..+...
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 87644 468999999999999999999999999999999999999999999999999999999998776422
Q ss_pred -------------------CcchHHHHHHhHHHHHHHHHHh
Q 015968 257 -------------------PLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 257 -------------------~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
..+||+.|++.+++.++..++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1359999988888776554443
No 60
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.86 E-value=6e-20 Score=174.53 Aligned_cols=164 Identities=18% Similarity=0.143 Sum_probs=136.3
Q ss_pred HHHHHHHHHhHhhchhhHHH-HHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHH
Q 015968 110 CLGAILFGYHLGVVNGALEY-LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC 188 (397)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~ 188 (397)
.+..++..+......+.+|. +.+++|.+..+. +++.+++.+++.+++++.|+++||+|||++++.+.++.+++.+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (399)
T PRK05122 21 VMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLA--GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLY 98 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH--HHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHH
Confidence 33444444445566666664 678999998888 999999999999999999999999999999999999888776655
Q ss_pred Hhh--------chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcch
Q 015968 189 ATA--------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (397)
Q Consensus 189 ~~~--------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 260 (397)
.++ .+++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|.++|+.+++.+.+. .+|
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~g~ 177 (399)
T PRK05122 99 LLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW-GGL 177 (399)
T ss_pred HHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc-ccH
Confidence 443 25678999999999999999998889999999999999999999999999999999999888776 789
Q ss_pred HHHHHHhHHHHHHHHH
Q 015968 261 RTMFGLAAIPSILLAL 276 (397)
Q Consensus 261 ~~~~~~~~~~~~~~~~ 276 (397)
++.+++.+++.++..+
T Consensus 178 ~~~~~~~~~~~~~~~~ 193 (399)
T PRK05122 178 AGLGLLIMLLALLGLL 193 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988776665544433
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=5.2e-20 Score=174.32 Aligned_cols=155 Identities=20% Similarity=0.091 Sum_probs=132.3
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 203 (397)
....+.+.++++.+..+. +++.+.+.+++.++.+++|+++||+|||++++++.++.+++.+++++..+. ++.|++
T Consensus 23 ~~~~~~~~~~~~~s~~~~--~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l 97 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQ--PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGL 97 (393)
T ss_pred HHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 344556678899887777 999999999999999999999999999999999999999988887776654 778999
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCC
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPE 283 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 283 (397)
+|++.+...+...+++.|++|+++|++++++......+|.++||.+++.+.+. .|+..+++.+...++..+..+.+||
T Consensus 98 ~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~~~~~~~l~~ 175 (393)
T PRK11195 98 VGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLAALFNLFIPR 175 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999998764 3777776666555545555566777
Q ss_pred Ch
Q 015968 284 SP 285 (397)
Q Consensus 284 ~~ 285 (397)
++
T Consensus 176 ~~ 177 (393)
T PRK11195 176 LG 177 (393)
T ss_pred Cc
Confidence 65
No 62
>PRK12382 putative transporter; Provisional
Probab=99.86 E-value=1.5e-19 Score=171.46 Aligned_cols=151 Identities=16% Similarity=0.218 Sum_probs=127.3
Q ss_pred hHhhchhhHH-HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH---h----
Q 015968 119 HLGVVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA---T---- 190 (397)
Q Consensus 119 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~---- 190 (397)
..+...+.+| ++.+++|.+..+. +++.+++.+++.++++++|+++||+|||++++.+.++..++.+... +
T Consensus 30 ~~~~~~p~l~~~l~~~lg~s~~~~--g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 107 (392)
T PRK12382 30 TVGLPLPVIPLFVHHDLGFGNTMV--GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVS 107 (392)
T ss_pred HHHHHhhhhhHHHHHhcCCcHHHH--HHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 3445455666 4688999999888 9999999999999999999999999999999999887776654322 1
Q ss_pred -hchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHH
Q 015968 191 -AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAI 269 (397)
Q Consensus 191 -~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~ 269 (397)
.++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+.+. .||++.+++..+
T Consensus 108 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~ 186 (392)
T PRK12382 108 APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH-FGFAALALTTMV 186 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHH
Confidence 357889999999999999988888888999999999999999999999999999999999888766 789988766554
Q ss_pred HHH
Q 015968 270 PSI 272 (397)
Q Consensus 270 ~~~ 272 (397)
..+
T Consensus 187 ~~~ 189 (392)
T PRK12382 187 LPL 189 (392)
T ss_pred HHH
Confidence 443
No 63
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=6.1e-20 Score=171.66 Aligned_cols=233 Identities=21% Similarity=0.265 Sum_probs=169.9
Q ss_pred hhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHH
Q 015968 121 GVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIG 200 (397)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (397)
....+..|.+.+++|++..+. +++.+++.+++.++.++.|+++||+|||+++.++.++.+++.+.+ ..++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVA--GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 456778999999999999888 999999999999999999999999999999999998888888777 77899999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc-chHHHHHHhHHHHHHHHHHhc
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL-WWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~w~~~~~~~~~~~~~~~~~~~ 279 (397)
|++.|++.+...+....++.|+++ ++|++++++++.+..+|..+++.+++.+.+... +||+.|.+.+++.++..+ .
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~ 170 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--A 170 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--H
Confidence 999999999888888888999986 579999999999999999999988887765422 499998776655443322 2
Q ss_pred cCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhH
Q 015968 280 LSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGIN 359 (397)
Q Consensus 280 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
++|+.++ +.+ ++++..+...++++|++..+...+...+ ....++
T Consensus 171 ~~~~~~~------~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 214 (355)
T TIGR00896 171 WIPQVRR------RVA--------------------------ANQTTTRLTPVRIWRSPLAWQVTVFFGL----QSGLYY 214 (355)
T ss_pred Hhhhhcc------ccC--------------------------CCCCCCCCCCchhhcCHhHHHHHHHHHH----HHHHHH
Confidence 2332211 000 0000011234456666544443332222 222345
Q ss_pred HHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 360 AVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 360 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
.+..|+|.++++.|++.. .....+.+++.+++.++.
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~ 252 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLI 252 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 667789999988888765 445556666666666543
No 64
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.86 E-value=9.6e-20 Score=160.77 Aligned_cols=260 Identities=19% Similarity=0.263 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG 184 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 184 (397)
..+....+.....+-....+.+.|.+.+.+|.+..+. .++....+.|..+++..||.++|++|||+.+....+..++.
T Consensus 79 l~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~--~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~ 156 (528)
T KOG0253|consen 79 LFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQA--PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVF 156 (528)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhh--hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHH
Confidence 4444455555554444444557788888899877777 89999999999999999999999999999999999999999
Q ss_pred HHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHH
Q 015968 185 AFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (397)
Q Consensus 185 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~ 264 (397)
..+.+.++|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. +.+.+|.++...+...+... .||||..
T Consensus 157 ~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~-~gwr~~l 233 (528)
T KOG0253|consen 157 GVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-FGWRYLL 233 (528)
T ss_pred HHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-hhHHHHH
Confidence 99999999999999999999999999 888888889999999998776666 88999999999998887776 7999999
Q ss_pred HHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcc---------------hHHHHHHHHh-hcCCCCCCc
Q 015968 265 GLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKER---------------VSEVMLDLTN-AGQGSAEPE 328 (397)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~ 328 (397)
.....+..+.+.+.+++||+||+...++++.++.+.++++...+. .+++..++++ +.+..++..
T Consensus 234 ~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~r 313 (528)
T KOG0253|consen 234 FTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVR 313 (528)
T ss_pred HHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccc
Confidence 888888888888888999999999999999998888887654321 1111111111 112233445
Q ss_pred cchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHH
Q 015968 329 AGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR 370 (397)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (397)
....+++..+.++..++.+..++.+.+. ++........+++
T Consensus 314 g~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfq 354 (528)
T KOG0253|consen 314 GGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQ 354 (528)
T ss_pred cchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHh
Confidence 5677888877777777666655544332 4444444444444
No 65
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.85 E-value=1.7e-19 Score=171.45 Aligned_cols=234 Identities=10% Similarity=0.017 Sum_probs=159.7
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH---h-hchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA---T-AQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~r 201 (397)
..+.+.+++|.+..+. +++.+.+.+++.++.++.|+++||+|||+++..+.++.+++.+++. . .++++.+++.|
T Consensus 35 ~~~~~~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (402)
T TIGR00897 35 WLSPFLKALGLSPQQS--ASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFY 112 (402)
T ss_pred hHHHHHHHhCCCHHHh--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH
Confidence 4455568899999888 9999999999999999999999999999999999999988876543 3 35788899999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHH-HHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH-hc
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGI-LAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG-MG 279 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~ 279 (397)
++.|++.+...+....++.+++|+++|++++++..++..+|. ++++.+++.+.+. .||+..+|......++..++ .+
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~ 191 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA-FGEMNTLWSALAFVLTGGVIALF 191 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cchHHHHHHHHHHHHHHHHHHHh
Confidence 999999888777777888999999999999999999999996 6889998887765 67665555443333322222 23
Q ss_pred cCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhH
Q 015968 280 LSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGIN 359 (397)
Q Consensus 280 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
+.++.++.. ++++ +++ . ++.+..++++++++..+...+... ....+.+
T Consensus 192 ~~~~~~~~~-~~~~-------------~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 239 (402)
T TIGR00897 192 SNKDIFTPQ-HMQT-------------REK----F----------SELGKAATILFTNPNVLLGGMVRI----INTIGLF 239 (402)
T ss_pred ccCCCCCcc-cccC-------------Ccc----h----------hhHHHHHHHHHcChhHHHHHHHHH----HHHHHHH
Confidence 334321100 0000 000 0 000112345666655444333222 2233456
Q ss_pred HHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhh
Q 015968 360 AVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYS 394 (397)
Q Consensus 360 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~ 394 (397)
.+.+|.|.++++.|++.. ........++.++|.++
T Consensus 240 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 276 (402)
T TIGR00897 240 GFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVI 276 (402)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Confidence 677889999988888865 23334445555555554
No 66
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.84 E-value=1.3e-19 Score=173.33 Aligned_cols=163 Identities=19% Similarity=0.165 Sum_probs=138.7
Q ss_pred HhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh-----hchH
Q 015968 120 LGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT-----AQSV 194 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~ 194 (397)
........|.+.++++.+..+. |++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.+..+. .+++
T Consensus 33 ~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (417)
T PRK10489 33 LGLLGVAVPVQIQMMTGSTLQV--GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSL 110 (417)
T ss_pred HHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcH
Confidence 4455567888888888887777 99999999999999999999999999999999888877776655432 4678
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH
Q 015968 195 QTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 195 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 274 (397)
+.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|..+||.+++.+.+. .+|+|.|++.++..++.
T Consensus 111 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-~~~~~~~~~~~~~~~~~ 189 (417)
T PRK10489 111 LAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA-GGVAWNYGLAAAGTFIT 189 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 89999999999998888888889999999999999999999999999999999999988765 68999998887777666
Q ss_pred HHHhccCCCCh
Q 015968 275 ALGMGLSPESP 285 (397)
Q Consensus 275 ~~~~~~~~e~~ 285 (397)
.++.+.+|+++
T Consensus 190 ~~~~~~l~~~~ 200 (417)
T PRK10489 190 LLPLLRLPALP 200 (417)
T ss_pred HHHHHhCCCCC
Confidence 66666677654
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.84 E-value=1.2e-18 Score=165.38 Aligned_cols=154 Identities=20% Similarity=0.155 Sum_probs=137.0
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..+++++++|.+..+. |++.+...++..+..++.|+++||+|||++++.+.++.+++.+++.+.++++.+++.|++.|
T Consensus 33 ~~~~~~~~~g~s~~~~--gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 110 (400)
T PRK11646 33 ISIRFVDQLGWAAVMV--GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSG 110 (400)
T ss_pred HHHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4456788999998888 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH-hccCCC
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG-MGLSPE 283 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e 283 (397)
++.+...+...+++.|++|+++|++++++......+|..+||.+++.+. . .+|++.|++.++..++..++ .++.||
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~-~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 111 LGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q-YDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9998888888899999999999999999999999999999999999987 4 79999999887776554433 334454
No 68
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.83 E-value=1.5e-18 Score=163.41 Aligned_cols=171 Identities=18% Similarity=0.112 Sum_probs=136.2
Q ss_pred HHHHHHhHhhchhhHH-HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHH-HhhHHHHHHHHHHHh
Q 015968 113 AILFGYHLGVVNGALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ-LDAVPLAAGAFLCAT 190 (397)
Q Consensus 113 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~-~~~~~~~~~~~~~~~ 190 (397)
.+..++..+...+..| ++++++|.+..+. +++.+++.++..+.+++.|+++||+|||+.++ .+.++.+++.+++++
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMI--GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3344444555556555 5678899998888 99999999999999999999999999988765 456666677788889
Q ss_pred hchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhh--hhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhH
Q 015968 191 AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGAL--GSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAA 268 (397)
Q Consensus 191 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~ 268 (397)
+++++.+++.|++.|.+.+...+...++..|+.+++.|+.. .+....+..+|.++++.+++.+.+. .+||+.|++.+
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~f~~~~ 162 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-FGFTVMFLTAA 162 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-cccHHHHHHHH
Confidence 99999999999999888777888888888898887766644 5777788889999999999988776 79999999988
Q ss_pred HHHHHHHHH-hccCCCChH
Q 015968 269 IPSILLALG-MGLSPESPR 286 (397)
Q Consensus 269 ~~~~~~~~~-~~~~~e~~~ 286 (397)
++.++..+. .+++||.|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHHHHHhCCCccc
Confidence 877665544 344777653
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.83 E-value=9.1e-19 Score=162.79 Aligned_cols=167 Identities=35% Similarity=0.493 Sum_probs=150.0
Q ss_pred HHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH
Q 015968 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (397)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~ 189 (397)
++..+...+......+..+.+.+++|.+..+. +++.+...++..++.++.|+++||+|||+.++.+.++..++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAEDLGLSASQA--GLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34455555666677778898999999998888 9999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHH
Q 015968 190 TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAI 269 (397)
Q Consensus 190 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~ 269 (397)
+.++++.+++.|++.|++.+...+....++.|++|+++|++.+++...+..+|..+++.+++.+.+. .+|++.+++.++
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 161 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-LGWRWLFLILAI 161 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998876 679999998888
Q ss_pred HHHHHHHHhc
Q 015968 270 PSILLALGMG 279 (397)
Q Consensus 270 ~~~~~~~~~~ 279 (397)
+.++..+..+
T Consensus 162 ~~~~~~~~~~ 171 (352)
T cd06174 162 LGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHH
Confidence 7776665544
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.83 E-value=2.2e-18 Score=162.96 Aligned_cols=170 Identities=21% Similarity=0.284 Sum_probs=131.1
Q ss_pred HHHHhHhhchhhHHHHHHHhCC--CchhhHHHHHHH--HHH---HHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHH
Q 015968 115 LFGYHLGVVNGALEYLAKDLGI--AENTVLQGWIVS--SLL---AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL 187 (397)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~---~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 187 (397)
...++...+++..+.+.+++.. ++.+. +.+.+ .+. ++..+++++.|+++||+|||++++.+.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLV--ALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHH--HHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3445566666677777777543 33333 33333 233 333568899999999999999999999999999999
Q ss_pred HHhhchHH--------HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC----
Q 015968 188 CATAQSVQ--------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG---- 255 (397)
Q Consensus 188 ~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---- 255 (397)
+++++++. .+++.|+++|++.+...+....++.|++++++|++..++...+..+|.+++++++..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99998865 488899999999999999999999999999999999999999999999999887765431
Q ss_pred ---CCcchHHHHHHhHHHHHHHHHHhccCCCChH
Q 015968 256 ---NPLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (397)
Q Consensus 256 ---~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 286 (397)
...+||+.|++.+++.++..+.....||+++
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPV 195 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 1268999998877766655555455666654
No 71
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.82 E-value=2.7e-19 Score=162.57 Aligned_cols=272 Identities=20% Similarity=0.226 Sum_probs=192.2
Q ss_pred cchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHh-C-------CCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccch
Q 015968 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDL-G-------IAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR 170 (397)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr 170 (397)
.++.+..+.++..+.+.+.|+..+++...+.+...+ | ++.... +.+..+.++|.++|++++|++.|++||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~--~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVL--ALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHH--HHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 455667888889999999999999998888776654 2 223333 788999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhhc-------hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHH
Q 015968 171 TRTFQLDAVPLAAGAFLCATAQ-------SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGI 243 (397)
Q Consensus 171 r~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 243 (397)
|+++...++++++++++++++. -.+++...|++.|+|.|+-+|...+..+|....+.||..++...+...+|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 9999999999999999877652 257789999999999999999999999999999999988888777777776
Q ss_pred HHHHHHhhhcC----CCC----------cchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCC-HHHHHHHHHHHhCCc
Q 015968 244 LAALVAGLPLA----GNP----------LWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGK-KSEAEKSIQTLYGKE 308 (397)
Q Consensus 244 ~~~~~~~~~l~----~~~----------~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~ 308 (397)
+.|.+++..+. ... .-||..|.+.++++++.+..-+.+||++++.....+ .+.+.+..++....
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~- 272 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV- 272 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc-
Confidence 66655554432 110 239999988888888888888889999998643332 22222111111110
Q ss_pred chHHHHHHHHhhcCCCCCCccchhhhhccchhH--HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh
Q 015968 309 RVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWK--VVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD 377 (397)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 377 (397)
..++.+........++.+.....+....| ..++..+..++.....++....+...+++.+|+.+.
T Consensus 273 ----~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~ 339 (538)
T KOG0252|consen 273 ----DIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPS 339 (538)
T ss_pred ----ccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCC
Confidence 11111111111111122222222222222 456667777777777788888889999998887765
No 72
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.82 E-value=4.7e-18 Score=161.91 Aligned_cols=173 Identities=24% Similarity=0.192 Sum_probs=143.7
Q ss_pred HHHHHHHHHhHhhchhhHHHHHHHhCCCchhh---HHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH
Q 015968 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTV---LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 186 (397)
+++.++..+......+.+|.+.+++|++..+. ..+++.+++.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHH
Confidence 33444445556666778898889999886542 237889999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHH
Q 015968 187 LCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (397)
Q Consensus 187 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~ 266 (397)
++.+.++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.+++|.+++.+.+. .+||+.|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~ 177 (408)
T PRK09874 100 LMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS-YGLRPVFFI 177 (408)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHH
Confidence 88899999999999999999754 5677778889999999999999999999999999999999988776 789999998
Q ss_pred hHHHHHHHHHH-hccCCCC
Q 015968 267 AAIPSILLALG-MGLSPES 284 (397)
Q Consensus 267 ~~~~~~~~~~~-~~~~~e~ 284 (397)
.+++.++..+. .++.+|.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 178 TASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 88777655544 3445554
No 73
>PRK10054 putative transporter; Provisional
Probab=99.81 E-value=2.5e-18 Score=162.97 Aligned_cols=155 Identities=20% Similarity=0.201 Sum_probs=135.5
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..+++.+++|++..+. |++.+.+.+++.+++++.|+++||+|||++++++.++.+++.++.++.++++.++++|++.|
T Consensus 30 l~~~l~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 107 (395)
T PRK10054 30 MTIYLSRQYSLSVDLI--GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALIN 107 (395)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4567788899999888 99999999999999999999999999999999999999999999999999999999999888
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHh-ccCCCC
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGM-GLSPES 284 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 284 (397)
.+.+...+....+..|.+|+++|++++++.+....+|.+++|.+++.+.. .+|++.|++.+++.++.++.. +++|++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 108 CAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88777788888999999999999999999999999999999999998764 589999998877776654433 334444
No 74
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.81 E-value=2.6e-18 Score=155.54 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=169.1
Q ss_pred hHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc---hHH
Q 015968 119 HLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ---SVQ 195 (397)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~---~~~ 195 (397)
.....+++.+.+.+++|+|.+|. +++.++..+...+..++.|.+.||+|.|++..++.++..+-++..+++. +++
T Consensus 29 VW~l~s~l~~~i~~~~~LS~~q~--~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~ 106 (417)
T COG2223 29 VWTLFSPLGVFIKSDFGLSEGQK--GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTW 106 (417)
T ss_pred HHHHHHHHHhhhccccCCCHHHH--HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence 35566778888999999999999 9999999999999999999999999999999999999999999988874 556
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcc---hHHHHHHhHHHHH
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW---WRTMFGLAAIPSI 272 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~---w~~~~~~~~~~~~ 272 (397)
.+++++++.|++ |+.+++...+++.+||++++|.++|++. ..++|..+..+++..+... .+ |+....+..+..+
T Consensus 107 ~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~-~g~~~w~~~~~i~~~~l~ 183 (417)
T COG2223 107 QLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA-FGFLAWRNVAGIYVVALA 183 (417)
T ss_pred HHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 999999999998 4667888899999999999999999999 8888888877777777665 45 9999888887776
Q ss_pred HHHHH-hccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCc-cchhhhhccchhHHHHHHHHHH
Q 015968 273 LLALG-MGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPE-AGWFDLFSSRYWKVVSVGAALF 350 (397)
Q Consensus 273 ~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
+..+. ++++.|.|......+ +.. ...+.+++++..|.+.+ .
T Consensus 184 v~~v~~~~~~~d~p~~r~~~~---------------------------------~~~~~~~~~v~~~~~~W~lsl----l 226 (417)
T COG2223 184 IAAVLAWLGMNDVPEHRASVK---------------------------------PQLPAQLKAVFSNKDTWLLSL----L 226 (417)
T ss_pred HHHHHHHHHhCCChhhhcccc---------------------------------ccchhHHHHHhcCcchHHHHH----H
Confidence 65554 444566654211000 001 22345555555555333 3
Q ss_pred HHHHhhhhHHHHHhHHHHHHH-cCCChh
Q 015968 351 LFQQLAGINAVVYYSTSVFRS-VGIESD 377 (397)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 377 (397)
++..+.++..+..++|.++++ .|.+..
T Consensus 227 Y~~tFG~Fvgfs~~l~~~~~~~fg~~~~ 254 (417)
T COG2223 227 YFATFGGFVGFSAYLPMYLVTQFGLSPV 254 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 444455678899999999886 688775
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=1.1e-17 Score=162.59 Aligned_cols=177 Identities=20% Similarity=0.201 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc-----chHHH-HH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-----GRTRT-FQ 175 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----Grr~~-l~ 175 (397)
+...++.+++... +.....+...|...++.|.+.++. +.+ +.....+ ++.+++|+++||+ |||+. ++
T Consensus 13 ~~~~~~~l~~~~g---l~~~~~~~~l~~~l~~~g~~~~~i--g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll 85 (491)
T PRK11010 13 NSAILLILGFASG---LPLALTSGTLQAWMTVENIDLKTI--GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLL 85 (491)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHhCCCCHHHH--HHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHH
Confidence 3444444444443 334466667888888889998777 665 3444443 6889999999999 99875 66
Q ss_pred HhhHHHHHHHHHHHhh---chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015968 176 LDAVPLAAGAFLCATA---QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLP 252 (397)
Q Consensus 176 ~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 252 (397)
++.++.+++.+++++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..
T Consensus 86 ~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~ 165 (491)
T PRK11010 86 ATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALW 165 (491)
T ss_pred HHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777777765 4788899999999999999999999999999999999999999999999999999999888
Q ss_pred cCCCCcchHHHHHHhHHHHHHHHHHhccCCCCh
Q 015968 253 LAGNPLWWRTMFGLAAIPSILLALGMGLSPESP 285 (397)
Q Consensus 253 l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 285 (397)
+.+...|||+.|++.+++.++..+..++.||++
T Consensus 166 l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 166 LADRYLGWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 877436999999998887776666555677764
No 76
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.80 E-value=1.3e-17 Score=157.39 Aligned_cols=227 Identities=13% Similarity=0.072 Sum_probs=156.7
Q ss_pred HHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhH-HHHHHH-HHH
Q 015968 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV-PLAAGA-FLC 188 (397)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~-~~~~~~-~~~ 188 (397)
+..+...+..+...+.+|.+.+++|.+..+. |++.+++.++..++++++|+++||+||+........ ..++.. ..+
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~i--g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMI--GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 3444445556677788889999999999888 999999999999999999999999998544322221 111222 234
Q ss_pred HhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhH
Q 015968 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAA 268 (397)
Q Consensus 189 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~ 268 (397)
..+++++.+++.|+++|.+.+...+...++..++ .++|++.++....+..+|.+++|.+++.+.+. .|||+.|++.+
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~-~g~~~~f~~~~ 165 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM-FDEQNILAILT 165 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH-cChhHHHHHHH
Confidence 4678999999999999998888888887777654 46789999999999999999999999998877 79999998876
Q ss_pred HHHHHHHHHhccCCCCh-HHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHH
Q 015968 269 IPSILLALGMGLSPESP-RWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGA 347 (397)
Q Consensus 269 ~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
+..++.++.. .+++++ +. ++ ++ +++.++....++++|++..+...+..
T Consensus 166 ~~~~~~~~~~-~~~~~~~~~----~~-~~-------------------------~~~~~~~~~~~~~l~~~~~~~~l~~~ 214 (382)
T TIGR00902 166 AGLAFMLIGF-LIKPTIPPK----DA-IP-------------------------EDESQGDSAFIALLKNPMNLRFLAAV 214 (382)
T ss_pred HHHHHHHHHH-HcCCCCCCC----cc-cc-------------------------ccccccchhHHHHHcChHHHHHHHHH
Confidence 5533333333 333331 10 00 00 00001122356777776655554443
Q ss_pred HHHHHHHhhhhHHHHHhHHHHHHHcCCChh
Q 015968 348 ALFLFQQLAGINAVVYYSTSVFRSVGIESD 377 (397)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 377 (397)
.+... .......|.|.++++.|.+..
T Consensus 215 ~l~~~----~~~~~~~~~~~~l~~~g~s~~ 240 (382)
T TIGR00902 215 CLIQG----AHAAYYGFSAIYWQAAGISAS 240 (382)
T ss_pred HHHHH----HHHHHHHHHHHHHHHCCCCHh
Confidence 33322 245566678888888998875
No 77
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.4e-18 Score=167.41 Aligned_cols=286 Identities=16% Similarity=0.164 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH
Q 015968 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 182 (397)
|.+++..++......-....++.+.+.++++++.+..+. +|+.++....+.+..|+.+.+.||+|.|++.++|.++..
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~--~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQI--AWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHH--HHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 444444444443333333444567899999999999887 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHH-HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchH
Q 015968 183 AGAFLCATAQSVQTMIIGR-VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~r-~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
++.++.++++++|.+++.. ++.|+|.|..+.....++..+|.+ +|+.+.|+..++.++|.++-|.+.-.+.+. .|||
T Consensus 123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~-~G~r 200 (509)
T KOG2504|consen 123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-KRALATGIAVSGTGVGTVVFPPLLKYLLSK-YGWR 200 (509)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-HHHHHHhhhhccCCcceeeHHHHHHHHHHH-hCcH
Confidence 9999999999999998887 788999999999999999988875 599999999999999998888888888777 8999
Q ss_pred HHHHHhHHHHHHHHHHhccC-CCChHHHHH---cCCH-----HHHHHHHHHHhC--CcchH----HHHHHHHhhcCCC--
Q 015968 262 TMFGLAAIPSILLALGMGLS-PESPRWLFQ---QGKK-----SEAEKSIQTLYG--KERVS----EVMLDLTNAGQGS-- 324 (397)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~---~~~~-----~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~-- 324 (397)
+.+++.+.+.+-.++....+ |..++.... +.+. +...+..++... +.... ....+.++...+.
T Consensus 201 ~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (509)
T KOG2504|consen 201 GALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRN 280 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccc
Confidence 99999888876666555444 322221000 0000 000000000000 00000 0011111111111
Q ss_pred -CCCccch---hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhhcc
Q 015968 325 -AEPEAGW---FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYSIS 396 (397)
Q Consensus 325 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~~ 396 (397)
..+.... .++++++.+..+.+. ......+++....++|.+..+.|++.. .....++++..++|-++.+
T Consensus 281 ~~~~~~~~~~d~~ll~~~~fl~~~~~----~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G 354 (509)
T KOG2504|consen 281 SPLQAFLSMLDLSLLKDPKFLLLALS----NLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILG 354 (509)
T ss_pred cchhhhhhhhhHHHHcCchHHHHHHH----HHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhh
Confidence 1111122 467777544444443 333344577888889999999999876 6677788888888776643
No 78
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.80 E-value=9.7e-18 Score=156.87 Aligned_cols=159 Identities=19% Similarity=0.182 Sum_probs=127.4
Q ss_pred hhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc-----chHHH-HHHhhHHHHHHHHHHHhh---
Q 015968 121 GVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-----GRTRT-FQLDAVPLAAGAFLCATA--- 191 (397)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----Grr~~-l~~~~~~~~~~~~~~~~~--- 191 (397)
..+++..|.+.+|+|++.++. +++... .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++.
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~--g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTI--GFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHH--HHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 345667899999999999888 888655 444454 89999999998 89886 466777777777677776
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcc--------hHHH
Q 015968 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW--------WRTM 263 (397)
Q Consensus 192 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--------w~~~ 263 (397)
.+.+.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+... .+ ||+.
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-EFANTGLITLWGYI 159 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-cccccccccccHHH
Confidence 45666777777888888888888899999999999999999999999999999999999887765 45 9999
Q ss_pred HHHhHHHHHHHHHHhcc-CCCC
Q 015968 264 FGLAAIPSILLALGMGL-SPES 284 (397)
Q Consensus 264 ~~~~~~~~~~~~~~~~~-~~e~ 284 (397)
|++.++..++..+..++ .||+
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCC
Confidence 99888877666555443 4554
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.79 E-value=7e-18 Score=180.68 Aligned_cols=222 Identities=13% Similarity=0.059 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHH---hhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 015968 143 QGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL---DAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYI 219 (397)
Q Consensus 143 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 219 (397)
.++..+++.+.++++++++|+++||+|||+++.. ..++.++..+.....++++.++++|+++|++.+...+...+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 3788889999999999999999999999997533 2223333333333458999999999999999999999999999
Q ss_pred hcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHH
Q 015968 220 SEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEK 299 (397)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 299 (397)
.+++++++|++++++..++..+|.++||++++++... .+|++.|+..+++.++.+++.+++|+++... .....+ ..
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~ 209 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS-GNFVILVALLMGIAVLGWLASLFIPKTGNAA--PDLKID-RN 209 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhCCCCCCCC--CCCeec-cc
Confidence 9999999999999999999999999999999999876 7999999555555565555666666653210 000000 00
Q ss_pred HHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh-
Q 015968 300 SIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD- 377 (397)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~- 377 (397)
..+ + ....++.+.+++.++...+..++..+. ...+..++|.++++ .|.+..
T Consensus 210 ---------~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~~~~~ 262 (1140)
T PRK06814 210 ---------IIR----S----------TITLLKYAKADKRIWLAILGISWFWLV----GAVVLSQLPLLAKETLGGDENV 262 (1140)
T ss_pred ---------hHH----H----------HHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHcCCchHH
Confidence 000 0 011244566666555555544433332 34455678888776 577654
Q ss_pred -HHHHHHHHHHHHHhhhhc
Q 015968 378 -VAASALVGAANVFGNYSI 395 (397)
Q Consensus 378 -~~~~~~~~~~~~~g~~~~ 395 (397)
+......+++.++|.+++
T Consensus 263 ~g~~~~~~~~g~~ig~~~~ 281 (1140)
T PRK06814 263 ATLFLAVFSVGVAVGSFLA 281 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 555566667777776654
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.79 E-value=2.1e-17 Score=177.40 Aligned_cols=162 Identities=20% Similarity=0.078 Sum_probs=129.6
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHH---HhhchHHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---ATAQSVQTMIIGR 201 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~r 201 (397)
.+.+.+..+++.+......+++.+++.++++++++++|+++||+|||++++++.++.+++.++. ...++++.++++|
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 110 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVT 110 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 3556677778877666656899999999999999999999999999999999887766555443 3457899999999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC--------CcchHHHHHHhHHHH-H
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN--------PLWWRTMFGLAAIPS-I 272 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~~~w~~~~~~~~~~~-~ 272 (397)
++.|++.+...+...+++.|++|+++|++++++...+..+|.++|+++++.+... ..+|.+.+.+.++.. +
T Consensus 111 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (1146)
T PRK08633 111 FLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAV 190 (1146)
T ss_pred HHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988653 234555554444333 3
Q ss_pred HHHHHhccCCCChH
Q 015968 273 LLALGMGLSPESPR 286 (397)
Q Consensus 273 ~~~~~~~~~~e~~~ 286 (397)
+.+++.+++|+.+.
T Consensus 191 ~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 191 LGLIFAYRLPKVPA 204 (1146)
T ss_pred HHHHHHhcCcCCCC
Confidence 34444555677654
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.78 E-value=6.2e-17 Score=153.94 Aligned_cols=170 Identities=24% Similarity=0.208 Sum_probs=138.3
Q ss_pred HHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc-----chHH-HHHHhhHHHHHHH
Q 015968 112 GAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-----GRTR-TFQLDAVPLAAGA 185 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----Grr~-~l~~~~~~~~~~~ 185 (397)
.++..++..+.....+|.+.++.|++.++. |++..+... .+..+++|+++||+ |||+ +++++.++.+++.
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~~g~~~~~i--g~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTVEGLDIQTI--GFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 344445556666778888888889999998 888666654 68899999999999 8765 7888888888888
Q ss_pred HHHHhh---chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHH
Q 015968 186 FLCATA---QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (397)
Q Consensus 186 ~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 262 (397)
.+.++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+...|||.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 777776 35777888878888888888889999999999999999999999999999999999988888765359999
Q ss_pred HHHHhHHHHHHHHHHhccCCCCh
Q 015968 263 MFGLAAIPSILLALGMGLSPESP 285 (397)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~e~~ 285 (397)
.|++.+++.++..+..++.||++
T Consensus 163 ~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 163 TYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCc
Confidence 99998887766655555667654
No 82
>PTZ00207 hypothetical protein; Provisional
Probab=99.78 E-value=9.1e-17 Score=156.17 Aligned_cols=169 Identities=12% Similarity=0.088 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 102 VLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
+|..+..........+..+ .++.+.+.+++++|++..+. +++.++. ..+.+++++.|+++||+|+|++++++.+++
T Consensus 26 Rw~~lva~~~~~~~~g~~y-~fsv~s~~L~~~lgls~~~l--~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 26 RFALLVLGAFCSICTSFMY-AFNLISGAMQARYNLTQRDL--STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcCHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3434444444444444433 23457788999999999887 8887764 345567788999999999999999999999
Q ss_pred HHHHHHHHhh------chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHH-HHHHhhhcC
Q 015968 182 AAGAFLCATA------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILA-ALVAGLPLA 254 (397)
Q Consensus 182 ~~~~~~~~~~------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~ 254 (397)
+++.++++++ ++++.+++.|++.|++.+..++....++.++|| ++||.+.|+...+..+|+++ +++..+++.
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987 689999999999999999988888899999997 67999999999999999874 666655543
Q ss_pred CCCcchHHHHHHhHHHHHHHHHHh
Q 015968 255 GNPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 255 ~~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
.+|++.|++.+++.++..++.
T Consensus 181 ---~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 181 ---DNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred ---HhHHHHHHHHHHHHHHHHHHH
Confidence 468888888887776655443
No 83
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.78 E-value=4.9e-17 Score=153.57 Aligned_cols=219 Identities=13% Similarity=0.080 Sum_probs=151.9
Q ss_pred HhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchH----HHHHHhhHHHHHHHHHHHhhch
Q 015968 118 YHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRT----RTFQLDAVPLAAGAFLCATAQS 193 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr----~~l~~~~~~~~~~~~~~~~~~~ 193 (397)
...+.+.+.+|.+.+++|.+..+. |++.+++.++..++++++|+++||+||| +.+.+...+. ........++
T Consensus 18 ~~~g~~~p~l~~~l~~~g~s~~~i--G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~ 93 (382)
T PRK11128 18 FAYGVFLPFWSVWLKGQGYTPETI--GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHS 93 (382)
T ss_pred HHHHHHhhhHHHHHHhcCCCHHHH--HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhccc
Confidence 334566778888889999999888 9999999999999999999999999984 3332222221 2223344688
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~ 273 (397)
++.+++.|++.|++.+...+...+++.++ .++|+++.+....+..+|.++||++++.+.+. .|||..|++.++..++
T Consensus 94 ~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-~g~~~~f~~~~~~~~~ 170 (382)
T PRK11128 94 FWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-FGEQAILWILTAGVAS 170 (382)
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-cChhHHHHHHHHHHHH
Confidence 99999999999999888888877777776 34578888888888999999999999998876 7999999887765554
Q ss_pred HHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHH
Q 015968 274 LALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQ 353 (397)
Q Consensus 274 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
.++..++.||.++. ++.+ ++.++...++++++|++..+...+...+....
T Consensus 171 ~~~~~~~~~~~~~~----~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 220 (382)
T PRK11128 171 MLLGQLLRPTIMPQ----GESR--------------------------QQESAGWPAWKALLKEPTVWRFLLCVSLLQGS 220 (382)
T ss_pred HHHHHHccCCCCCc----cccc--------------------------cccccccchHHHHHcChhHHHHHHHHHHHHHH
Confidence 44444444443110 0000 00001123567788887666555443333222
Q ss_pred HhhhhHHHHHhHHHHHHHcCCChh
Q 015968 354 QLAGINAVVYYSTSVFRSVGIESD 377 (397)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~~ 377 (397)
......+.+.++++.|++..
T Consensus 221 ----~~~~~~~~~~~~~~~g~s~~ 240 (382)
T PRK11128 221 ----HAAYYGFSAIYWQAAGYSAS 240 (382)
T ss_pred ----hHhHHHHHHHHHHHCCCCHh
Confidence 33445566777788888865
No 84
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=2.9e-18 Score=152.42 Aligned_cols=144 Identities=20% Similarity=0.184 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 015968 141 VLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYIS 220 (397)
Q Consensus 141 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 220 (397)
...|++.+.|.+...+.++.+|.++||+|||++++++++..++..++.+.+.|+..+++.|++.|+..|- ..++.++++
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rAiis 146 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRAIIS 146 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHHHHH
Confidence 3458999999999999999999999999999999999999999999999999997777789999999754 566789999
Q ss_pred cccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC---CCcchHHHH--HHhHHHHHH-HHHHhccCCCCh
Q 015968 221 EISPTEIRGALGSVNQLFICVGILAALVAGLPLAG---NPLWWRTMF--GLAAIPSIL-LALGMGLSPESP 285 (397)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~w~~~~--~~~~~~~~~-~~~~~~~~~e~~ 285 (397)
|.+++|+|+.+++.+.....+|.++||.+|+++.+ ....+...+ ++..++... ..+..+++||+-
T Consensus 147 dV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 147 DVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred hhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999999999999999999999999877 211222222 233333333 344566789984
No 85
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.77 E-value=1.8e-16 Score=140.77 Aligned_cols=251 Identities=21% Similarity=0.251 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH
Q 015968 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 182 (397)
+..+..+.+..+...-..+.+.+.++.+++++|++.+.. |++.++..+.+.+.+++..+++.|+|.++.+..++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~a--GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVA--GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHH
Confidence 334444444455555566777889999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHH
Q 015968 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT 262 (397)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 262 (397)
++.++-... +.+.++.+-.+.|.+.+......+..+-+.||++ -+..+++|.....+|..+++.+...+.++..+||.
T Consensus 89 ~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 89 AGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 999988776 7788889999999999999999999999999976 69999999999999999999999888887568999
Q ss_pred HHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHH
Q 015968 263 MFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKV 342 (397)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
...+.++++++.++.++ |...| ++. ...+.+..+...++|++.-|.
T Consensus 167 aL~~WAl~allAl~~Wl--Pq~~r-----~~~---------------------------~~~~~~~~~~~~vw~~~~aW~ 212 (395)
T COG2807 167 ALGFWALLALLALLIWL--PQALR-----EQA---------------------------ASIATKLVSVRKVWRSPLAWQ 212 (395)
T ss_pred HHHHHHHHHHHHHHHHh--hhccc-----ccc---------------------------cccccccccccccccCchhHH
Confidence 99888888888777653 22111 000 000112223345788866666
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 343 VSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
+.+.+.+ +...+|.+..|+|.++.+.|++.. +....++.+.++..+++.
T Consensus 213 vtLfmGl----qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~ 263 (395)
T COG2807 213 VTLFMGL----QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLI 263 (395)
T ss_pred HHHHHHh----hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHH
Confidence 5554444 444588899999999999999986 555666666666666654
No 86
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.77 E-value=1.1e-17 Score=161.47 Aligned_cols=172 Identities=26% Similarity=0.355 Sum_probs=137.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHH
Q 015968 101 VVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (397)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 180 (397)
+.+..+...++......+.....+..++.+..|+|-++.. .|+.+...++.+++.++.|+++|.+|||.+++.+.++
T Consensus 41 ~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~---~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l 117 (599)
T PF06609_consen 41 RFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNW---SWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLL 117 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccc---hHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Confidence 3343333344444444444444456778999999987554 5999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcch
Q 015968 181 LAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWW 260 (397)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 260 (397)
..+++++++-++|...++++..+.|+|.|.... ....++|..|.|.|+...++......+...+++.++..+... .+|
T Consensus 118 ~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-~~W 195 (599)
T PF06609_consen 118 GVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-SGW 195 (599)
T ss_pred HHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-CCc
Confidence 999999999999999999999999999777664 455689999999998887777766666666777887766554 799
Q ss_pred HHHHHHhHHHHHHHHHH
Q 015968 261 RTMFGLAAIPSILLALG 277 (397)
Q Consensus 261 ~~~~~~~~~~~~~~~~~ 277 (397)
||.|++.+++..+.+++
T Consensus 196 Rw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 196 RWIFYIFIIWSGIALVL 212 (599)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 99999998877665544
No 87
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.77 E-value=1.3e-17 Score=162.65 Aligned_cols=180 Identities=14% Similarity=0.101 Sum_probs=136.2
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHH---HHhhchHHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL---CATAQSVQTMIIGR 201 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~r 201 (397)
...+++.+++|.+..+. ++......++..++.++.|+++||+|||+++.++.++..++.+. ...+++...+++++
T Consensus 272 ~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 272 YMPSYLSHNLHYSEDHG--VLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34455667789887766 67778888899999999999999999999988887654433322 22345677788889
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccC
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 281 (397)
++.|++.+........++.|.+|++.|++++++.+....+++.++|.+.+.+.+...+|+..+++..+++++.++..+++
T Consensus 350 ~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 350 LMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 99998877777777888899999999999999754445555667777777766543457777776666777766667778
Q ss_pred CCChHHHHHc-----CCHHHHHHHHHHHhC
Q 015968 282 PESPRWLFQQ-----GKKSEAEKSIQTLYG 306 (397)
Q Consensus 282 ~e~~~~~~~~-----~~~~~~~~~~~~~~~ 306 (397)
||+|+++.++ ++.+++++.+++++.
T Consensus 430 pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 430 KETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred ccccCCCCCCccccccchhhHHHHhhcccc
Confidence 9999987654 778888888888873
No 88
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.77 E-value=2e-16 Score=142.56 Aligned_cols=250 Identities=18% Similarity=0.172 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH
Q 015968 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 186 (397)
..+....++.++......++.|.+++.|+++..+. +++...++.+|.+++++.|++.+|+|+|+-++.|+.++++++.
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a--~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEA--SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHH--HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 34445556667777777889999999999999999 9999999999999999999999999999999999999999998
Q ss_pred HHH---hhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC-------
Q 015968 187 LCA---TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN------- 256 (397)
Q Consensus 187 ~~~---~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------- 256 (397)
+.. ...++..++++-++.|.|.+...+.+..+++.+.+++.....+++.+.+..+|.+++|++++.+..+
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 874 5678999999999999999999999999999999998788999999999999999999999887652
Q ss_pred -----------CcchHHHHHHhHHHHHHHHHHhccC--CCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCC
Q 015968 257 -----------PLWWRTMFGLAAIPSILLALGMGLS--PESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQG 323 (397)
Q Consensus 257 -----------~~~w~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (397)
...|++.|...+...+++.+..... |+.+.. +.++
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~--------------------------------~~~~ 221 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA--------------------------------APSL 221 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc--------------------------------cccc
Confidence 1237788877777666655544432 332210 0001
Q ss_pred CCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhh
Q 015968 324 SAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYS 394 (397)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~ 394 (397)
.++++....++++++..+.-.++.+++... -..+..|++.++.+ .|++.. .........+.++|-++
T Consensus 222 ~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~----Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFi 291 (422)
T COG0738 222 GASGSAGLSSLFQNKHLRLGVLAIFLYVGA----EVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFI 291 (422)
T ss_pred cccccchHHHHHhChHHHHHHHHHHHHHhH----HHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 111122567888887777766666655554 45677788888887 677765 33444444555555544
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.76 E-value=2.4e-17 Score=159.63 Aligned_cols=154 Identities=19% Similarity=0.190 Sum_probs=131.9
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-cchHHHHHHhhHHHHHHHHHHHhhchHHH-HHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQSVQT-MIIGR 201 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~r 201 (397)
..+..++.+++|++..+. +++.+.+.....+..+++|+++|| +|||++++++.++++++.++++++.+... ++++|
T Consensus 35 ~~l~~yl~~~lg~~~~~a--~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~ 112 (489)
T PRK10207 35 GILAVFFVKQLGFSQEQA--FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIAL 112 (489)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 446778889999998888 899999998888889999999999 99999999999999999999998876444 55889
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCccc--chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEI--RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
+++|+|.|...+...++++|.+|+++ |+.++++++.+.++|..+||.+++.+.+. .|||+.|++.++..++.++.++
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~-~gw~~~F~i~~i~~~~~~~~~~ 191 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK-FGYSVTYNLCGAGLIIALLVYF 191 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-hChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998874 47789999999999999999999999887 7999999887654444443333
Q ss_pred c
Q 015968 280 L 280 (397)
Q Consensus 280 ~ 280 (397)
+
T Consensus 192 ~ 192 (489)
T PRK10207 192 A 192 (489)
T ss_pred H
Confidence 3
No 90
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.75 E-value=7.9e-16 Score=145.89 Aligned_cols=156 Identities=15% Similarity=0.118 Sum_probs=117.6
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHH-HHHHHHHhhhhhhcccchHHHH-HHhhHHHHHHHHHHHhhchHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLA-GATVGSFTGGSLADKFGRTRTF-QLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 203 (397)
..+++.+++|.+.++. |++.+...+ ++.++++++++ +||+|||+.+ +.+.++.+++.++.+++++++.+++.+.+
T Consensus 38 ~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (393)
T PRK15011 38 LSIFLTDEVHARPAMV--GFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVF 114 (393)
T ss_pred HHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3445788999999888 998776544 66666666666 9999998875 45566666777778888999988777666
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccc--hhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH-hcc
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIR--GALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG-MGL 280 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~ 280 (397)
.|...+...+....++.|+.+++.| +...++...+..+|.+++|.+++.+.+. .|||+.|++.++..++..+. .++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~ 193 (393)
T PRK15011 115 LSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG-FSFTVMYLSAAVAFIVCGVMVWLF 193 (393)
T ss_pred HHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHhh
Confidence 5555556777778888888776655 3445788888999999999999998876 79999999888777655544 445
Q ss_pred CCCCh
Q 015968 281 SPESP 285 (397)
Q Consensus 281 ~~e~~ 285 (397)
+||.+
T Consensus 194 ~~~~~ 198 (393)
T PRK15011 194 LPSMR 198 (393)
T ss_pred cCccC
Confidence 67664
No 91
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.73 E-value=1.3e-15 Score=144.58 Aligned_cols=158 Identities=16% Similarity=0.127 Sum_probs=116.6
Q ss_pred hhchhhH-HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH---hh-----
Q 015968 121 GVVNGAL-EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA---TA----- 191 (397)
Q Consensus 121 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~~----- 191 (397)
..+.+.. .++.+++|.+..+. +++.+++.+++.++++++|+++||+|||++++.+.+..+++..... +.
T Consensus 19 ~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (396)
T TIGR00882 19 SAYFPFFPIWLHDVNGLSKTDT--GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQS 96 (396)
T ss_pred HHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3334444 45677899999888 9999999999999999999999999999999887766655443221 11
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 192 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
+.+..+++.+++.|++.+...+....+..|.. ++++...+.......+|.+++|.+++.+.+ .+|++.|++.+++.
T Consensus 97 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--~~~~~~f~~~~~~~ 172 (396)
T TIGR00882 97 NILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS--IDPQIVFWLGSGFA 172 (396)
T ss_pred HHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc--cCchHHHHHHHHHH
Confidence 12344566778888888777777777776653 234566777778889999999999988754 58999999988877
Q ss_pred HHHHHHhcc-CCCC
Q 015968 272 ILLALGMGL-SPES 284 (397)
Q Consensus 272 ~~~~~~~~~-~~e~ 284 (397)
++..++.++ .||+
T Consensus 173 ~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 173 LILMLLLMFAKPKA 186 (396)
T ss_pred HHHHHHHHHhCCCC
Confidence 666554444 3443
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.73 E-value=1.7e-16 Score=153.63 Aligned_cols=151 Identities=19% Similarity=0.204 Sum_probs=132.9
Q ss_pred hHHHHHHH--hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-cchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHH
Q 015968 126 ALEYLAKD--LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRV 202 (397)
Q Consensus 126 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (397)
+..++.++ +|++..+. +++.+.+.+++.++++++|+++|| +|||++++++.++.+++.++.+++++++.+++.|+
T Consensus 33 L~~yl~~~~~lg~s~~~a--g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 110 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQA--FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLG 110 (475)
T ss_pred HHHHHHhCCCCCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHH
Confidence 44455666 89998888 999999999999999999999999 89999999999999999999999988889999999
Q ss_pred HHHHhhhhhhhhhhhhhhcccCccc---chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 203 LAGIGIGISSAIVPLYISEISPTEI---RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
+.|++.|...+...++++|++|+++ |+.+.++++.+.++|.++||++++.+.+. .+|++.|++.++..++..+..+
T Consensus 111 l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~-~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 111 TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN-YGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998764 88899999999999999999999998776 7899999887765554444333
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.70 E-value=6.3e-17 Score=144.82 Aligned_cols=151 Identities=19% Similarity=0.168 Sum_probs=135.9
Q ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhh
Q 015968 130 LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIG 209 (397)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 209 (397)
.+++...+.++...|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++++...++++++.++++.++++|.++|+|.+
T Consensus 95 ~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 95 PAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred chhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH
Confidence 44444444444444999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccCccc-chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccC
Q 015968 210 ISSAIVPLYISEISPTEI-RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 281 (397)
.......++++|.||.++ |+.++|+.-.+..+|.++||.+||.+.+. .|.+..|.+.+++.++-..+.+++
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-AGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-cCCcCcHHHHHHHHHHHHHHHHhe
Confidence 999999999999999865 79999999999999999999999999987 899999999999988877665554
No 94
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.69 E-value=3.8e-15 Score=142.56 Aligned_cols=153 Identities=16% Similarity=0.065 Sum_probs=103.2
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH---hhc-----hHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA---TAQ-----SVQ 195 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~~~-----~~~ 195 (397)
.....++.+++|++..+. |++.+++.+++.++++++|+++||+|||++++++..+.+++..... .++ ...
T Consensus 31 ~~~~~~l~~~~g~s~~~~--g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (420)
T PRK09528 31 SFFPIWLHDINGLSGTDT--GIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILL 108 (420)
T ss_pred HHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334556777799999888 9999999999999999999999999999999887666554433211 111 111
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHH
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 275 (397)
..++.+++.|.+.....+....+..+ + .++++..++.......+|..++|++++.+.+ .+|++.|++.+++.++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--~~~~~~f~~~~~~~~~~~ 184 (420)
T PRK09528 109 GAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN--INPQINFWLGSGSALILL 184 (420)
T ss_pred HHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh--cCchHhHHHHHHHHHHHH
Confidence 11222233333222222223233222 2 2346778888888899999999999998865 489999988887776666
Q ss_pred HHhccCC
Q 015968 276 LGMGLSP 282 (397)
Q Consensus 276 ~~~~~~~ 282 (397)
++.++.+
T Consensus 185 ~~~~~~~ 191 (420)
T PRK09528 185 VLLFFAK 191 (420)
T ss_pred HHHhccc
Confidence 5555543
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.67 E-value=3.9e-15 Score=145.01 Aligned_cols=149 Identities=24% Similarity=0.257 Sum_probs=123.9
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-cchHHHHHHhhHHHHHHHHHHHhhc-hHHHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQ-SVQTMIIGR 201 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r 201 (397)
.....++.+++|++..+. +++.+.+........+++|+++|| +|||++++++.++.+++.+++++++ +.+.+++.|
T Consensus 42 ~~l~~yl~~~lg~s~~~a--~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~ 119 (500)
T PRK09584 42 GIMAVYLVKQLGMSEADS--ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGM 119 (500)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 346667889999998877 777777766666666789999999 5999999999999999998888874 566677889
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCccc--chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEI--RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 275 (397)
++.|++.|...+...+++.|++|+++ |..++++++.+.++|..+||++++.+.+. .|||+.|++.++..++.+
T Consensus 120 ~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~-~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 120 ATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK-YGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHHH
Confidence 99999999888888899999998653 35678889999999999999999999876 799999998776544433
No 96
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.64 E-value=1.1e-14 Score=139.31 Aligned_cols=150 Identities=23% Similarity=0.200 Sum_probs=120.8
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc-chHHHHHHhhHHHHHHHHHHHhhc-hHHHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAAGAFLCATAQ-SVQTMIIGRV 202 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~ 202 (397)
....++.+++|++..+. +.+.+.+.+...++++++|+++||+ |||++++++.++.+++.++.+... +...+++...
T Consensus 31 ~L~~yL~~~lgls~~~a--~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~ 108 (493)
T PRK15462 31 LLILYLTNQLKYDDNHA--YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLA 108 (493)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Confidence 35556778899999888 8999999999999999999999999 999999999999999987766543 2233444444
Q ss_pred HHHHhhhhhhhhhhhhhhcccCcc--cchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 203 LAGIGIGISSAIVPLYISEISPTE--IRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
+.+++.|...+...++++|.+|++ +|..++++++.+.++|+.++|++.+.+.+. .||++.|.+.++..++.++.
T Consensus 109 li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 109 IIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-YSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh-hChHHHHHHHHHHHHHHHHH
Confidence 555666666677788999999875 689999999999999999999999998776 79999998876654444443
No 97
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=4.6e-14 Score=134.70 Aligned_cols=152 Identities=19% Similarity=0.133 Sum_probs=110.7
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccch-HHHHHHhhHHHHHHHHHHHhhchHHHHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR-TRTFQLDAVPLAAGAFLCATAQSVQTMIIGRV 202 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (397)
+++.+++.+++|++..+. |++.+++.++..++++++|.++||+|| |+++.++.++..++..+..+.++++.+++.|+
T Consensus 23 ~~l~~~l~~~~g~s~~~i--Gl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEI--GWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLL 100 (418)
T ss_pred HHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 556678888899999988 999999999999999999999999965 78888888888888888888899999999999
Q ss_pred HHHHhhhhhhhhhhhhhh--------cccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH
Q 015968 203 LAGIGIGISSAIVPLYIS--------EISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~--------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 274 (397)
+.|++.+...+...++.. |......|.+..| .+|.++++++++.+... ..|+. |++.++..++.
T Consensus 101 l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~-~~~~~-f~~~~~~~~~~ 172 (418)
T TIGR00889 101 ANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE-LSNIQ-LYITAGSSALL 172 (418)
T ss_pred HHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc-chhHH-HHHHHHHHHHH
Confidence 999987666665544321 2222222334443 35777777777766322 34654 44555555555
Q ss_pred HHHhccCCCCh
Q 015968 275 ALGMGLSPESP 285 (397)
Q Consensus 275 ~~~~~~~~e~~ 285 (397)
.++.+++||+|
T Consensus 173 ~~~~~~~~e~~ 183 (418)
T TIGR00889 173 GVFALTLPDIP 183 (418)
T ss_pred HHHHhcCCCCC
Confidence 55556678775
No 98
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.63 E-value=1.5e-14 Score=145.03 Aligned_cols=140 Identities=15% Similarity=0.037 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccC
Q 015968 145 WIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISP 224 (397)
Q Consensus 145 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 224 (397)
+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++++++.|++.++.++...++++|++|
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33556668889999999999999999999999999999999999998888888888999999888888999999999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCChH
Q 015968 225 TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (397)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 286 (397)
.+.|++++|+.++...+|.+++|++++.+... +....|++.+++.++.+++.+++||+..
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999877653 3566777777777777777777898753
No 99
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.63 E-value=8e-14 Score=135.16 Aligned_cols=257 Identities=20% Similarity=0.138 Sum_probs=169.7
Q ss_pred cCcchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHH
Q 015968 97 KSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL 176 (397)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~ 176 (397)
+..+..|..-.+..++..+. ....+.+..+..-|.... +++..+..+...+..++.|.++||+.||++++.
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~-------~va~~wlv~~lt~S~~~v--alv~~a~~LP~~Llsl~aG~laDr~drrrili~ 80 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQ-------TVALAWLVTQLTGSPLMV--ALVQAASTLPILLLSLFAGALADRFDRRRILIL 80 (524)
T ss_pred chHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence 34444454444444444443 334455555554444444 899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhh-----chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhh
Q 015968 177 DAVPLAAGAFLCATA-----QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL 251 (397)
Q Consensus 177 ~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 251 (397)
+-++.++..+..++. .+.+.+++.-++.|++.+...|...+++.|+.|+++...++++.....++..++||.++|
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 988777655443322 478889999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCcchHHHHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccch
Q 015968 252 PLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGW 331 (397)
Q Consensus 252 ~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (397)
.+... .|-.+.|++.++..++.++.++..+..++. .+...++..+ .-+..+
T Consensus 161 ~Lva~-~G~~~~f~inalsfl~~i~~l~~~~~~~~~--~~~~~e~~~~--------------------------~l~~G~ 211 (524)
T PF05977_consen 161 ILVAF-FGAAAAFLINALSFLISILALLRWKPPPPP--SSLPRERFFS--------------------------ALREGL 211 (524)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHccccccc--cccchhhhhh--------------------------hHHHHH
Confidence 98765 677888888777665554444333322110 0000000000 011233
Q ss_pred hhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH-cCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 332 FDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRS-VGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
+.+.+++..+.+++...++.+. ...+...+|.+.++ .|.+.. +......+++.++|+++.
T Consensus 212 ryv~~~~~l~~~l~~~~~~~l~----~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~ 274 (524)
T PF05977_consen 212 RYVRSSPPLRSVLLRSFLFNLF----ASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLL 274 (524)
T ss_pred HHHhcchHHHHHHHHHHHHHHh----hhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455444443332222221 22333447777654 566654 666777888888887764
No 100
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=4.8e-14 Score=133.72 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=126.6
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
...++++++|++..+. +++.+...++..++.+++|+++||+|||+.+..+.+..++........++.+.+++.+++.+
T Consensus 239 ~p~~l~~~~~~~~~~~--g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 239 MPLFIINELHLPEKLA--GVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4446677889988777 88888777778889999999999999999888777666665555556678888888898888
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCC
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPE 283 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 283 (397)
++.+...+....+..|.+|. +|+.++++++....+|..+++.+++.+.+. .||++.|++.+++.++.++..++.||
T Consensus 317 ~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI-WNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 88877777777888999985 589999999998999999999999998876 78999998888888777777766654
No 101
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.62 E-value=3.7e-15 Score=119.32 Aligned_cols=136 Identities=26% Similarity=0.339 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcc
Q 015968 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTE 226 (397)
Q Consensus 147 ~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 226 (397)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++....++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34556778889999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhcc-CCC
Q 015968 227 IRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL-SPE 283 (397)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~e 283 (397)
+|++..++......+|..+++.+.+.+.+. .+|++.|++.+++.++..+..++ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQF-LGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-cchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999988876 78999998888777666554433 454
No 102
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.62 E-value=7.9e-14 Score=133.06 Aligned_cols=164 Identities=17% Similarity=0.215 Sum_probs=123.0
Q ss_pred HhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc----ccchHHHHHHh-hHHHHHHHHHHHhhchH
Q 015968 120 LGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGRTRTFQLD-AVPLAAGAFLCATAQSV 194 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grr~~l~~~-~~~~~~~~~~~~~~~~~ 194 (397)
.....+..+.+.+++|++.... +++..+..+...+.+|+.|+++| |+|||++++++ .+..+++.++.+++++.
T Consensus 20 ~~l~~~~l~~yl~~lg~~~~~~--~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~ 97 (477)
T TIGR01301 20 WALQLSLLTPYVQELGIPHAWA--SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADI 97 (477)
T ss_pred HHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchh
Confidence 3444445666778899988777 89999999999999999999999 59999988775 66666666777776554
Q ss_pred H-----------------HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccc--hhhhhHHHHHHHHHHHHHHHHhhhcC-
Q 015968 195 Q-----------------TMIIGRVLAGIGIGISSAIVPLYISEISPTEIR--GALGSVNQLFICVGILAALVAGLPLA- 254 (397)
Q Consensus 195 ~-----------------~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~- 254 (397)
+ .++++..+..++.....+...++++|.+|+++| +.+.++...+.++|.++|+.+++...
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~ 177 (477)
T TIGR01301 98 GHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGL 177 (477)
T ss_pred hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 2 223333344557777888889999999998865 57899999999999999999987641
Q ss_pred -C-------C-----CcchHHHHHHhHHHHHHHHHH-hccCCCCh
Q 015968 255 -G-------N-----PLWWRTMFGLAAIPSILLALG-MGLSPESP 285 (397)
Q Consensus 255 -~-------~-----~~~w~~~~~~~~~~~~~~~~~-~~~~~e~~ 285 (397)
. . ..+.++.|++.+++.++..++ .++.+|.|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 178 YKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 1 0 026789999888777665554 45568865
No 103
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.62 E-value=2.1e-13 Score=129.26 Aligned_cols=174 Identities=15% Similarity=0.031 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHH--HHHHHHHHHHHHHhh-hhhhcccchHHHHHHhhHHH-H
Q 015968 107 GVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWI--VSSLLAGATVGSFTG-GSLADKFGRTRTFQLDAVPL-A 182 (397)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~-g~l~d~~Grr~~l~~~~~~~-~ 182 (397)
..+...++..+...+...+..|.+.++.|.+.++. |++ .++..+...+.++++ ++.+||+||||.+++...+. +
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~i--Gl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTAL--AFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHH
Confidence 34445566677777788889999999999999888 886 456677777788888 55799999998875555332 2
Q ss_pred HHHHHHH-h--hch-HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 015968 183 AGAFLCA-T--AQS-VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (397)
Q Consensus 183 ~~~~~~~-~--~~~-~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 258 (397)
+.....+ + ..+ ...++...++.++..+...+....+..|..++++++...+....+..+|.++|+...+.+.+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~-~ 160 (390)
T TIGR02718 82 ACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK-F 160 (390)
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 2222222 1 222 333444445566666677777777888888888888888888888889999998888777766 7
Q ss_pred chHHHHHHhHHHHHHHHHHhccCCC
Q 015968 259 WWRTMFGLAAIPSILLALGMGLSPE 283 (397)
Q Consensus 259 ~w~~~~~~~~~~~~~~~~~~~~~~e 283 (397)
|||..|++.+++.++..+..++++|
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999998887766555555443
No 104
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.60 E-value=5.4e-14 Score=133.95 Aligned_cols=154 Identities=19% Similarity=0.158 Sum_probs=129.0
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..|.+.++.|.+..+. +++.+.+.++..++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+.+..++.|
T Consensus 242 ~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (406)
T PRK11551 242 WLPSLLVGQGLSRSQA--GLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAG 319 (406)
T ss_pred HHHHHHHhCCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 4566667789988777 89999999999999999999999999999998877777777777777778877778888889
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccC
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 281 (397)
++.++..+...+++.|.+|+++|++.+++.+....+|..++|.+++.+.+...+|...++..+.+.++..++.+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 320 LFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888899999999999999999999999999999999999988765667777777666665555554433
No 105
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.58 E-value=1e-13 Score=133.32 Aligned_cols=158 Identities=17% Similarity=0.179 Sum_probs=120.9
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc----cch-HHHHHHhhHHHHHHHHHHHhhch------
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGR-TRTFQLDAVPLAAGAFLCATAQS------ 193 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------ 193 (397)
...+++.+++|++.... |++.++..+..++..|+.|+++|| +|| |+.++.+.+..+++.+++...++
T Consensus 21 ~l~~~~~~~~g~s~~~~--g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFV--GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHHccCCCHHHH--HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 36677888999999888 999999999999999999999997 687 45677888888888877766543
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccc-CcccchhhhhHHHHHHHHHHHHHHHHhhhcC------CCCcchHHHHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLPLA------GNPLWWRTMFGL 266 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~~~~~w~~~~~~ 266 (397)
...+++.+++.+++.+.......++..|+. ++++|++..++...+..+|.++++.+.+.+. ....+|++.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i 178 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHH
Confidence 456677778888888877777778888887 4688999999888888887766555443332 123689999988
Q ss_pred hHHHHHHHHHH-hccCCCC
Q 015968 267 AAIPSILLALG-MGLSPES 284 (397)
Q Consensus 267 ~~~~~~~~~~~-~~~~~e~ 284 (397)
.+++.++..+. .++.+|+
T Consensus 179 ~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKER 197 (437)
T ss_pred HHHHHHHHHHHHHcCCEec
Confidence 88877665544 4445654
No 106
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=2.3e-14 Score=139.64 Aligned_cols=259 Identities=15% Similarity=0.126 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH
Q 015968 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 182 (397)
...+.++++..+..++..+.+...+..+.+.|+++..+. |++.+.+-++..+...+..+..-|.-|-+++-+|.++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~s--G~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQS--GLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMG 173 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcc--eeEeeecccchhhhhHhHHHhccccCccceeeechhHHH
Confidence 345555666677777777788888999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh--------------------c---------------------------h----HH-HHHHHHHHHHHhhhh
Q 015968 183 AGAFLCATA--------------------Q---------------------------S----VQ-TMIIGRVLAGIGIGI 210 (397)
Q Consensus 183 ~~~~~~~~~--------------------~---------------------------~----~~-~~~~~r~l~G~~~~~ 210 (397)
++.+++++- + . ++ .++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 999988751 0 0 22 567778999999999
Q ss_pred hhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC------------------cchHHHHHHhHHHHH
Q 015968 211 SSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP------------------LWWRTMFGLAAIPSI 272 (397)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~w~~~~~~~~~~~~ 272 (397)
.++....|+-|....++-+..+|+..+...+|+++|.+++++..+.+ ..|...|++.+.+.+
T Consensus 254 i~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLL 333 (735)
T ss_pred CccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHH
Confidence 99999999999999998899999999999999999999998865310 126677778888888
Q ss_pred HHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhh---ccchhHHHHHHHHH
Q 015968 273 LLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLF---SSRYWKVVSVGAAL 349 (397)
Q Consensus 273 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 349 (397)
+..+.++++|.+.+...++ +..+. .+..+.+++ ...++.+.....+++. +.....++.+...+
T Consensus 334 ~~a~p~f~fPk~lp~~~~~-~~~~~---~~~~k~~~~----------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l 399 (735)
T KOG3626|consen 334 FSAVPLFFFPKELPKSQKR-KRARD---LHVLKTESG----------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVL 399 (735)
T ss_pred HHHHHHHhCcccCcccccc-chhhh---hcccccccc----------cccCCcchhhhHHHHHHHHHHHhcCchHHHHHH
Confidence 8888888887764321111 00000 000000000 0001111111222222 22233355555666
Q ss_pred HHHHHhhhhHHHHHhHHHHHHH-cCCChh
Q 015968 350 FLFQQLAGINAVVYYSTSVFRS-VGIESD 377 (397)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 377 (397)
....+...+.++..|+|.|++. +|.+++
T Consensus 400 ~~~~~~~~~~G~~tFlPKyLE~Qfg~sas 428 (735)
T KOG3626|consen 400 ASVIESLAITGYITFLPKYLETQFGISAS 428 (735)
T ss_pred HHHHHHHHHhhHHHhhHHHHHHHcCCCHH
Confidence 6666666788899999999986 688875
No 107
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.57 E-value=2.9e-14 Score=136.46 Aligned_cols=147 Identities=12% Similarity=0.037 Sum_probs=123.2
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhh
Q 015968 135 GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAI 214 (397)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 214 (397)
+.+.... +++.++..++..++.+++|+++||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+.
T Consensus 258 ~~~~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 258 EQGTRVF--GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred CcchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 4554455 89999999999999999999999999999999999999998888888999999999999999998887777
Q ss_pred hhhhhhcccCcccchhhhhH-HHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc-cCCCC
Q 015968 215 VPLYISEISPTEIRGALGSV-NQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG-LSPES 284 (397)
Q Consensus 215 ~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~e~ 284 (397)
...++.|.+|++.|++..+. ++....+|.++++.+.|.+.+. .||+..|++.+++.++..++.+ +++++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-IGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-hCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88899999999988877655 6777889999999999999886 7899999988777765554433 33433
No 108
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.56 E-value=5.7e-14 Score=134.07 Aligned_cols=141 Identities=16% Similarity=0.114 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc----hHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ----SVQTMIIGRVLAGIGIGISSAIVPLYI 219 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~~~~~~~~~~~~~~ 219 (397)
+.+.++..++..++.++.|+++||+|+|++++++.++.+++..+..... +++.+++.+++.|++.+...+....++
T Consensus 254 g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i 333 (418)
T TIGR00889 254 SIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFV 333 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999988876666532 245677789999999988888888999
Q ss_pred hcccCcccchhhhhHHH-HHHHHHHHHHHHHhhhcCCCC-----cchHHHHHHhHHHHHHHHHH-hccCCCC
Q 015968 220 SEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNP-----LWWRTMFGLAAIPSILLALG-MGLSPES 284 (397)
Q Consensus 220 ~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~-----~~w~~~~~~~~~~~~~~~~~-~~~~~e~ 284 (397)
.|++|+++|++++++.+ ....+|.++||+++|.+.+.. .||++.|++.+++.++..++ .++++|+
T Consensus 334 ~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 334 EKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999997 567899999999999887652 36999998887777665544 4456665
No 109
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=1.5e-13 Score=129.17 Aligned_cols=147 Identities=15% Similarity=0.038 Sum_probs=123.5
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchH--HHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSV--QTMIIGRVL 203 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l 203 (397)
..+.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+.+.++.++.+++.++..+.++. ..+++..++
T Consensus 227 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFL--VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 3444567788887766 888999999999999999999999999999999998888888777766533 334556778
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHH
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 275 (397)
.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+. .||++.|++.+++.++.+
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-IGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-hchhhHHHHHHHHHHHhc
Confidence 88888888888888999999999999999999999999999999999998876 789999988777665543
No 110
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=5.9e-13 Score=125.28 Aligned_cols=154 Identities=21% Similarity=0.235 Sum_probs=127.4
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
...++.+++|.+..+. +++.+...+...++.++.|++.||+|||+++.++.++..+..+...+.++.+.+++.+++.|
T Consensus 222 ~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 222 MPLLIIHELGLPDKLA--GLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNA 299 (375)
T ss_pred hHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667889988777 88877777777888899999999999999998887777666666666778888888889999
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCC
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPE 283 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 283 (397)
++.+...+....++.|..|.+ ++.++++++....+|..++|.+++.+.+. .||+..|++.+++.++..++.++++|
T Consensus 300 ~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAER-WSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHheecC
Confidence 998888888888899998864 67999999999999999999999988876 78999999988888777776655543
No 111
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=4.3e-13 Score=124.60 Aligned_cols=155 Identities=25% Similarity=0.355 Sum_probs=138.0
Q ss_pred hhhHHHHHHH-hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHH-HHHHhhHHHHHHHHHHHhhchHHHHHHHH
Q 015968 124 NGALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTR-TFQLDAVPLAAGAFLCATAQSVQTMIIGR 201 (397)
Q Consensus 124 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (397)
....+.+.++ +|.+..+. +++.+...++..++.++.+++.||+|||+ .+..+.++..++.++....++.+.+++..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (352)
T cd06174 195 LTYLPLYLQEVLGLSAAEA--GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVAL 272 (352)
T ss_pred HHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3344555444 48888777 99999999999999999999999999999 99999999999999999989999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccC
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 281 (397)
++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+. .+|++.+++.+++.++..+..+++
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-GGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcchHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999999999999999999999998876 799999999988888777665543
No 112
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.54 E-value=4.2e-13 Score=127.52 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=126.0
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 015968 127 LEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGI 206 (397)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 206 (397)
.+.+..+.|.+ .. ++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.++.+.+++..++.|+
T Consensus 239 ~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 314 (399)
T PRK05122 239 ITLYYAARGWD--GA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGF 314 (399)
T ss_pred HHHHHHHcccc--cc--hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34334455653 33 566778888899999999999999999999999988888888888888888888888999999
Q ss_pred hhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCC
Q 015968 207 GIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPES 284 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 284 (397)
+.+..++.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+. .||++.|++.+++.++.++..++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-FGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99988888778888999999999999999999999998888888888776 789999998888777766655544433
No 113
>PRK09952 shikimate transporter; Provisional
Probab=99.53 E-value=5.3e-13 Score=128.37 Aligned_cols=158 Identities=18% Similarity=0.101 Sum_probs=115.5
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh---h-chHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT---A-QSVQTMIIG 200 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 200 (397)
...+++.+++|.+.... ..+..+..+...++.+++|+++||+|||++++.+.++.+++.+.... . ++.+.+++.
T Consensus 272 ~~~~y~~~~~g~s~~~~--~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK09952 272 FALNYSTQNLGLPRELF--LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFS 349 (438)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 35556777888887654 44555556667888899999999999999998887766555433322 2 234444555
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHH-HHHHHHHHHHHHHhhhcCCCC-cchHHHHHHhHHHHHHHHHHh
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNP-LWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~-~~w~~~~~~~~~~~~~~~~~~ 278 (397)
.++.|++.+...+...+++.|.+|.+.|+.+.++.+ .+..+|+.++|.+.+.+.+.. .+|+..+.+.+++.++..+..
T Consensus 350 ~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~ 429 (438)
T PRK09952 350 IMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA 429 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 667788888888888899999999999988888854 445688899999998887642 458888887777777776666
Q ss_pred ccCCCC
Q 015968 279 GLSPES 284 (397)
Q Consensus 279 ~~~~e~ 284 (397)
+.++|+
T Consensus 430 ~~~~~~ 435 (438)
T PRK09952 430 LLMKDN 435 (438)
T ss_pred HHcccc
Confidence 656654
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.52 E-value=3.9e-12 Score=116.43 Aligned_cols=267 Identities=14% Similarity=0.092 Sum_probs=178.2
Q ss_pred cCcchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHH
Q 015968 97 KSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL 176 (397)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~ 176 (397)
+..+++|.+++..++..+.+++.+..+++...+....+| +.+.. -|+..+|.+.+....+++-|+.|++|-|..+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~--~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAA--DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHH--HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 556778888888888898888888888888888888899 44444 699999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhh------chHH--HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHH
Q 015968 177 DAVPLAAGAFLCATA------QSVQ--TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALV 248 (397)
Q Consensus 177 ~~~~~~~~~~~~~~~------~~~~--~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 248 (397)
+.++.+++..+-..+ +.++ ....+..+.+.+.-.....-.-+..-||++++|..+..+-.++..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999999876554 2344 56677778887776666555577788999999999999988888899999888
Q ss_pred HhhhcCCCC-----cchHH--HHHHhHHHHHHHH-HHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhh
Q 015968 249 AGLPLAGNP-----LWWRT--MFGLAAIPSILLA-LGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNA 320 (397)
Q Consensus 249 ~~~~l~~~~-----~~w~~--~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
+...+..+. ..|-. .|+...++.++.+ ...+..++.|+.... .+....
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps-----~s~~~~------------------- 250 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPS-----ASQAAL------------------- 250 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc-----hhHhhh-------------------
Confidence 888776542 34554 3443444333322 233333333321000 000000
Q ss_pred cCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCC--hhHHHHHHHHHHHHHhhhhcc
Q 015968 321 GQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIE--SDVAASALVGAANVFGNYSIS 396 (397)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~g~~~~~ 396 (397)
++..-..+.+.+++++.+....+...+... .++...+.+...+...|++ ..+....++.+++++|+++++
T Consensus 251 --~~~~f~~si~~~~~n~~F~il~~~ygi~~g----~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~g 322 (480)
T KOG2563|consen 251 --QDASFPKSIKSCFKNRQFIILAICYGIGLG----LFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASG 322 (480)
T ss_pred --hcCcHHHHHHHHHcCccHHHHHHHHhhhHH----HHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHH
Confidence 001122345667777655444444333322 3445555555444556777 335666667777777776653
No 115
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.51 E-value=1.6e-15 Score=147.34 Aligned_cols=258 Identities=17% Similarity=0.171 Sum_probs=3.0
Q ss_pred HHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH
Q 015968 110 CLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA 189 (397)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~ 189 (397)
++..+......+.....++.+++.|+++..+. |++.+.+-++..+..++..++.+|..|-+++-+|.+++++++++++
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~--G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERRFGLSSSQS--GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 33333335556666778899999999999999 9999999999999999999999998888999999999999998876
Q ss_pred hh------------c--------------------------------------hHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 015968 190 TA------------Q--------------------------------------SVQTMIIGRVLAGIGIGISSAIVPLYI 219 (397)
Q Consensus 190 ~~------------~--------------------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~~ 219 (397)
+- . -+..++++.++.|+|.+..++...+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 41 0 034578888999999999999999999
Q ss_pred hcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC---------------------cchHHHHHHhHHHHHHHHHHh
Q 015968 220 SEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP---------------------LWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------------~~w~~~~~~~~~~~~~~~~~~ 278 (397)
-|..+++.-+..+|+..+...+|+++|.++++.+.+.+ ..|-..|++.+++.++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998766410 125556666677777666667
Q ss_pred ccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhh---cCCCCCCccchhhhhccchhHHHHHHHHHHHHHHh
Q 015968 279 GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNA---GQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQL 355 (397)
Q Consensus 279 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
+++|+.-+...+..+ +.+...++ .++..++...+.++. .+..+.-....+++++ +++++...+......
T Consensus 247 ~~FPk~lp~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~----Np~f~~~~la~~~~~ 318 (539)
T PF03137_consen 247 FFFPKKLPGTSERQE--EKESSERK--EEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLT----NPVFMCLILAGVFES 318 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HcCCccCCCcccccc--hhhhhhcc--hhhhhhhcccccccccchhhhhhhHHHHHHHHhc----ChHHHHHHHHHHHHH
Confidence 777765321100000 00000000 000000000000000 0001111222333444 456666666666666
Q ss_pred hhhHHHHHhHHHHHHH-cCCChh
Q 015968 356 AGINAVVYYSTSVFRS-VGIESD 377 (397)
Q Consensus 356 ~~~~~~~~~~~~~~~~-~g~~~~ 377 (397)
.....+..|+|.+++. +|.+++
T Consensus 319 ~~~~G~~tF~pKylE~QF~~sas 341 (539)
T PF03137_consen 319 FIVSGFATFLPKYLESQFGLSAS 341 (539)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCHH
Confidence 6788899999999986 677765
No 116
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=7.7e-13 Score=128.38 Aligned_cols=152 Identities=18% Similarity=0.099 Sum_probs=114.8
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH--HHHhhchHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF--LCATAQSVQTMIIGRVL 203 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~r~l 203 (397)
...++++++|++..+. ++..+.+.++..++.+++|+++||+|||+.++....+..++.. .....++...+.+.+++
T Consensus 281 ~p~yl~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T PRK09556 281 SPVYAFQELGFSKEDA--INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFA 358 (467)
T ss_pred HHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 4457778899998888 8889999999999999999999999999877665544443332 22334566667778888
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHH-HHHHHHHHhhhcCCC-----------CcchHHHHHHhHHHH
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICV-GILAALVAGLPLAGN-----------PLWWRTMFGLAAIPS 271 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~-----------~~~w~~~~~~~~~~~ 271 (397)
.|++..+..........|.+|++.||++.|+.+....+ |..++|.+.|.+.+. ..+|+..|++.+++.
T Consensus 359 ~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~ 438 (467)
T PRK09556 359 LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAA 438 (467)
T ss_pred HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHH
Confidence 88654444443445677999999999999999988886 778888888888871 257999998887777
Q ss_pred HHHHHHhc
Q 015968 272 ILLALGMG 279 (397)
Q Consensus 272 ~~~~~~~~ 279 (397)
++.++..+
T Consensus 439 ~~~~~~~~ 446 (467)
T PRK09556 439 IGCICLMA 446 (467)
T ss_pred HHHHHHHH
Confidence 66655543
No 117
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=2.5e-13 Score=131.17 Aligned_cols=150 Identities=15% Similarity=0.143 Sum_probs=121.6
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc--cchHHHHHH--hhHHHHHHHHHHHhhchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK--FGRTRTFQL--DAVPLAAGAFLCATAQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~--~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~r 201 (397)
..+.+.+++|.+..+. +++.++..++..++.++.|+++|| +++|+...+ +.++.+++.+++.+.++++.+++.+
T Consensus 263 ~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~ 340 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEA--AFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 4454556789988777 899999999999999999999997 344443333 3344445555666778899889999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
++.|++.+...+...+++.|.+|++++++.+++++....+|.++||.+++.+.+...+|++.|++.+++.++..+.
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 9999999988888899999999999999999999999999999999999998876457999999888776655543
No 118
>PRK12382 putative transporter; Provisional
Probab=99.50 E-value=1.1e-12 Score=124.43 Aligned_cols=149 Identities=16% Similarity=0.164 Sum_probs=125.4
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..+.+.++.+.+. . ++....+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|
T Consensus 238 ~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 238 FVSLYFASKGWAM--A--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHhcCCch--h--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 3344445566543 3 55666777888899999999999999999999999988888888888888888888999999
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
++.+..++.....+.|.+|+++|+++.++++....+|..++|.+.+.+.+. .||++.|++.+++.++.++..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-FGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHH
Confidence 999888888888889999999999999999999999999999999998876 7899999998887766665543
No 119
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.49 E-value=6.4e-13 Score=125.58 Aligned_cols=145 Identities=20% Similarity=0.131 Sum_probs=112.1
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHH--HHHHh--hchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA--FLCAT--AQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~r 201 (397)
...++++++|.+..+. +++.....++..++.++.|+++||+|||+.+..+..+..+.. ++..+ .++.+.+++..
T Consensus 242 ~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (394)
T TIGR00883 242 LPTYLTQTLGLSANSA--LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLV 319 (394)
T ss_pred HHHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 3445557789888777 888889999999999999999999999998876555444333 22222 24667777778
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhH-HHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSV-NQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSI 272 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~ 272 (397)
++.|++.+...+....++.|.+|+++|+++.++ +..+..+|..++|.+++.+.+....|++.++..++..+
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 320 LGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 888998888889999999999999999999988 45666788889999999988773338887766555443
No 120
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.48 E-value=3.2e-12 Score=120.78 Aligned_cols=148 Identities=11% Similarity=0.009 Sum_probs=127.5
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..+.+.+++|.+.... |++.+...++..++.++.+++.||+|.|+.++++.++.++..++.++.++.+.+++.+++.|
T Consensus 227 ~~~~~l~~~g~s~~~~--g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g 304 (382)
T TIGR00902 227 FSAIYWQAAGISASAT--GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHC 304 (382)
T ss_pred HHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 3344446699998888 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHH-HHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHh
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
+..+...+....++.+. |+++|+.+.++++ ....+|.++|++++|.+.+. .|+ ..|++.+++.++..++.
T Consensus 305 ~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~-~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 305 GTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT-LGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccH-HHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8888999999986 46789999999999999987 576 55666666666555443
No 121
>PRK03699 putative transporter; Provisional
Probab=99.47 E-value=2.3e-12 Score=122.23 Aligned_cols=155 Identities=14% Similarity=0.063 Sum_probs=126.4
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 203 (397)
....+++.+++|++..+. +++.+.+.++..++.++.|+++||+|+|+++.....+.++..++....++.+.+.+..++
T Consensus 226 ~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK03699 226 SWVPEYAQKKFGMSLEDA--GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILG 303 (394)
T ss_pred HHHHHHHHHHcCCChHHh--hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 334556667889998888 899999999999999999999999999999988887777777776677777777777788
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCC
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSP 282 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 282 (397)
.|++.+..++....+..|..+. .++...+.......+|..++|.+.+.+.+. .||+..+++.+++.++..+..++++
T Consensus 304 ~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 304 LGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAH-FGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCchhhhhhhHHHHHHHHHHHHHHH
Confidence 8998888888877788887764 467788888888899999999999998876 7899999888877766655544443
No 122
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.47 E-value=2.4e-12 Score=124.50 Aligned_cols=167 Identities=20% Similarity=0.094 Sum_probs=122.2
Q ss_pred HHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccc-----hHHHHHHhhHHHH-HHHHH
Q 015968 114 ILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG-----RTRTFQLDAVPLA-AGAFL 187 (397)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-----rr~~l~~~~~~~~-~~~~~ 187 (397)
+..++.........+.+.+++|++.++. +.+.+...+...+-.+ +|+++||++ ||+.++++.++.. ++...
T Consensus 36 ~~qGl~~l~~~~~~~~l~~~lg~s~~~i--~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~ 112 (468)
T TIGR00788 36 FVKGIAGLMRLPLSPMLTDDLGLDGARY--QRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL 112 (468)
T ss_pred HHhhHHHHhhhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence 3444443333446778888899999988 8889999998888555 999999998 7777787776663 44333
Q ss_pred HHhhchHHHHH-HHHHHHHHhhhhhhhhhhhhhhcccCcccchhh---hhHHHHHHHHHHHHHHHHhhhcCCCCcchHHH
Q 015968 188 CATAQSVQTMI-IGRVLAGIGIGISSAIVPLYISEISPTEIRGAL---GSVNQLFICVGILAALVAGLPLAGNPLWWRTM 263 (397)
Q Consensus 188 ~~~~~~~~~~~-~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~---~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 263 (397)
.+..++..... +..++.+++.+......-++..|..+ +++... .+.......+|.++++.+++.+.+. .+|+..
T Consensus 113 l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~-~~~~~~ 190 (468)
T TIGR00788 113 LPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK-TLTRIL 190 (468)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh-cCcchH
Confidence 34334544444 47789999999999999999999998 544433 3333444558999999999988776 789999
Q ss_pred HHHhHHHHHHHHHHhccCCCCh
Q 015968 264 FGLAAIPSILLALGMGLSPESP 285 (397)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~e~~ 285 (397)
|++.+++.++..+..++++|++
T Consensus 191 f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 191 FLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred HHHHHHHHHHHHHHHHhccccc
Confidence 9998888777666666777763
No 123
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=2.5e-12 Score=121.43 Aligned_cols=149 Identities=19% Similarity=0.184 Sum_probs=107.9
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHH--HHH------hhHHHHHHHHHHHhhchHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRT--FQL------DAVPLAAGAFLCATAQSVQTM 197 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~--l~~------~~~~~~~~~~~~~~~~~~~~~ 197 (397)
...++.+++|.+..+. +++.+...++..++.++.|+++||+|||+. ... +.++..+..+.....++.+..
T Consensus 238 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (399)
T TIGR00893 238 FPTYLVQERGLSILEA--GFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAA 315 (399)
T ss_pred HHHHHHHHhcccHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 3445667789888777 899999999999999999999999999961 111 111111111111122344444
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcc-hHHHHHHhHHHHHHHHH
Q 015968 198 IIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW-WRTMFGLAAIPSILLAL 276 (397)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-w~~~~~~~~~~~~~~~~ 276 (397)
+...++.+++.+ ..+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+. .| |++.|++.+++.++..+
T Consensus 316 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~ 393 (399)
T TIGR00893 316 LALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT-TGSFAGALMVVAALALIGAL 393 (399)
T ss_pred HHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC-CCchhHHHHHHHHHHHHHHH
Confidence 444444444444 6788889999999999999999999999999999999999999887 56 99999888777766555
Q ss_pred Hh
Q 015968 277 GM 278 (397)
Q Consensus 277 ~~ 278 (397)
..
T Consensus 394 ~~ 395 (399)
T TIGR00893 394 SY 395 (399)
T ss_pred HH
Confidence 43
No 124
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.45 E-value=1e-12 Score=128.55 Aligned_cols=143 Identities=22% Similarity=0.135 Sum_probs=111.5
Q ss_pred hHH-HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh--chHHHHHHHHH
Q 015968 126 ALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA--QSVQTMIIGRV 202 (397)
Q Consensus 126 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~ 202 (397)
..| ++.+++|.+..+. +++.+.+.++..++.++.|+++||+|||++++++.++.++..++.... .+.+.+.+..+
T Consensus 297 ~lp~~l~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 297 LLPTYLKTDLGYDPHTV--ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 344 4546899998888 999999999999999999999999999999988877766665544332 34444444555
Q ss_pred HHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 203 LAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
+.++...+..+....++.|.+|+++|++++++.+....+|..+||++++.+.+. .||++.+++.++..
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~-~g~~~~~~~~~~~~ 442 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR-LDLGTALASLSFSL 442 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc-CChHHHHHHHHHHH
Confidence 554444444566778899999999999999999999999999999999999887 78888876655444
No 125
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.44 E-value=1.2e-11 Score=116.33 Aligned_cols=180 Identities=19% Similarity=0.211 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccch-HHHHHHhhHHHHHH
Q 015968 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR-TRTFQLDAVPLAAG 184 (397)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-r~~l~~~~~~~~~~ 184 (397)
+.++.+.+++......++.+..-.+.++++.+.+....||+.++..++.+++++++|+.+.|.|. |+.++.+.++.+++
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g 115 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIG 115 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHH
Confidence 33344445555555555544433334554444444444999999999999999999999999996 88999999999999
Q ss_pred HHHH-Hhh---c-hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC-c
Q 015968 185 AFLC-ATA---Q-SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP-L 258 (397)
Q Consensus 185 ~~~~-~~~---~-~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~ 258 (397)
+++. ++. + ..+.++++|++.|+|.|. ....-+|+++-...++|.++++....+..+|.++||.++..+..-. .
T Consensus 116 ~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~ 194 (488)
T KOG2325|consen 116 NLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK 194 (488)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC
Confidence 9887 332 3 678899999999999755 4667899999888889999999988888888888888776654310 1
Q ss_pred c-----------hHHHHHHhHHHHHHHHHH-hccCCCChH
Q 015968 259 W-----------WRTMFGLAAIPSILLALG-MGLSPESPR 286 (397)
Q Consensus 259 ~-----------w~~~~~~~~~~~~~~~~~-~~~~~e~~~ 286 (397)
| +...-|+.+++.++.+++ .++++|..+
T Consensus 195 G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 195 GFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred ceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 1 334556777777666554 444666654
No 126
>PRK03545 putative arabinose transporter; Provisional
Probab=99.44 E-value=1.1e-11 Score=117.37 Aligned_cols=150 Identities=13% Similarity=0.083 Sum_probs=120.0
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHH-HHHHhhchHHHHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA-FLCATAQSVQTMIIGRVL 203 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l 203 (397)
...+.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||..++. ..+..++. .+....++.+.++++.++
T Consensus 227 ~~~~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l 303 (390)
T PRK03545 227 YIEPFVQQVAGLSENFA--TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVCLLLLLPAANSEWHLSVLSIF 303 (390)
T ss_pred HHHHHHHHhcCCCccHH--HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 35566777789888777 899999999999999999999999998875544 44444433 344556778888888889
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
.|++.+...+.....+.+..| ++|+++++++.....+|..+||+++|.+.+. .|++..|++.+++.++.++..+
T Consensus 304 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 304 WGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH-LGLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChhHHHHHHHHHHHHHHHHHH
Confidence 999887766767778888876 5789999999999999999999999999987 8999999998888777665543
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.44 E-value=3.2e-12 Score=121.80 Aligned_cols=135 Identities=21% Similarity=0.163 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 223 (397)
+.+.+++.++..++.+++|+++||+|||+.+..+.++.+++.+...+.++.+.+++.+++.|++.+...+....++.+..
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC
Confidence 56666777888899999999999999999999998888888877777788888889999999999999998888889999
Q ss_pred CcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 224 PTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 224 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
++++|++.++++.....+|..+||.+++.+.+. .||++.|++.+++.++..+..+
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-YGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998876 7899999998888777665543
No 128
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.42 E-value=3.3e-12 Score=123.94 Aligned_cols=161 Identities=13% Similarity=0.024 Sum_probs=122.0
Q ss_pred hchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh-----hc----
Q 015968 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT-----AQ---- 192 (397)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~---- 192 (397)
......|.+.+++|.+..+. ++......++..++.++.|+++||+|||+.+.++.++.+++.++.++ .+
T Consensus 302 ~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (481)
T TIGR00879 302 AIMYYSPTIFENAGVSTDHA--FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSK 379 (481)
T ss_pred ehHHHHHHHHHHcCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Confidence 33456788888899988666 78888888999999999999999999999999998888877766652 11
Q ss_pred --hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHH
Q 015968 193 --SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP 270 (397)
Q Consensus 193 --~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~ 270 (397)
+...+....++.+.......+....++.|.+|+++|++++++.+....+|.++++.+.+.+.+. .+|++.|++.+++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~-~~~~~~f~~~~~~ 458 (481)
T TIGR00879 380 SSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES-IGVGGVFIFFGGL 458 (481)
T ss_pred chhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccceehhHHHH
Confidence 2223333333333333334455667789999999999999999999999999999998888766 6899999888888
Q ss_pred HHHHHHHh-ccCCCCh
Q 015968 271 SILLALGM-GLSPESP 285 (397)
Q Consensus 271 ~~~~~~~~-~~~~e~~ 285 (397)
+++.+++. ++.||++
T Consensus 459 ~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 459 NVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHheecccCC
Confidence 76666554 4456553
No 129
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.42 E-value=2.5e-12 Score=122.22 Aligned_cols=139 Identities=25% Similarity=0.224 Sum_probs=113.9
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH-HHHhhchHHHHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF-LCATAQSVQTMIIGRVL 203 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~r~l 203 (397)
...+++.+++|.+..+. +++.+...++..++.++.|+++||+|||+.+.++.++.++..+ +....++.+.+.+..++
T Consensus 260 ~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTV--ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFF 337 (405)
T ss_pred hhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 34556777889998888 8999999999999999999999999999999888776643332 33344566666777677
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcc-hHHHHHH
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW-WRTMFGL 266 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-w~~~~~~ 266 (397)
.|++.++..+....++.|.+|+++|++++|+.+....+|..++|++.+.+.+. .| |+..+..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~g~~~~~~~~ 400 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR-LDEYGTALAS 400 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHh
Confidence 78777777788888999999999999999999999999999999999999887 55 8776654
No 130
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.41 E-value=6.6e-12 Score=120.09 Aligned_cols=157 Identities=15% Similarity=0.085 Sum_probs=129.2
Q ss_pred hHHHHHHH-hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
..|.+.++ +|.+.... +++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.++.
T Consensus 245 ~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 245 LYPALADEVWQMGAAQI--GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred hhHHHHHhccCCChhHh--HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 34444444 89888777 8999999999999999999999998888888888888888888888888888888888999
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH-HHHhccCCC
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL-ALGMGLSPE 283 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~e 283 (397)
|++.+...+...+++.|..|++.|+++++++.....+|..+|+.+.|.+.+. .|++..+++.+++.++. ++....+++
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM-MTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 9988877777788999999999999999999999999999999999999876 67888887776665444 444444555
Q ss_pred Ch
Q 015968 284 SP 285 (397)
Q Consensus 284 ~~ 285 (397)
.+
T Consensus 402 ~~ 403 (417)
T PRK10489 402 LR 403 (417)
T ss_pred cc
Confidence 43
No 131
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.40 E-value=2.4e-11 Score=115.29 Aligned_cols=157 Identities=15% Similarity=0.097 Sum_probs=118.9
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc-hHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ-SVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~ 204 (397)
..|.+.+++|.+..+. +++.+.+.++..++.++.|++.||+|||+.+..+..+.+++.++....+ +...+ .-++.
T Consensus 227 ~lp~~l~~~g~s~~~a--g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~ 302 (393)
T PRK09705 227 WLPAFYIEIGASAQYS--GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVC 302 (393)
T ss_pred HHHHHHHHcCCChhhh--hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHH
Confidence 3444445689988877 8999999999999999999999999999999888877777766554323 22222 23456
Q ss_pred HHhhhhhhhhhhhhhhcccC-cccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH-hccCC
Q 015968 205 GIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG-MGLSP 282 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~ 282 (397)
|++.+...+.......+.++ +++|++..++.+....++..++|.+.+.+.+...+|...|++.++..++..++ ..+.|
T Consensus 303 g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 303 GLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 88877777777666677775 56789999999999999999999999999887456888888877766555544 44567
Q ss_pred CChH
Q 015968 283 ESPR 286 (397)
Q Consensus 283 e~~~ 286 (397)
|++.
T Consensus 383 ~~~~ 386 (393)
T PRK09705 383 ARFP 386 (393)
T ss_pred cccc
Confidence 7643
No 132
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.40 E-value=1.2e-11 Score=119.65 Aligned_cols=152 Identities=17% Similarity=0.113 Sum_probs=104.1
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc--chHHHH-HHhhHHHHHHHHHHHh--hchHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF--GRTRTF-QLDAVPLAAGAFLCAT--AQSVQTMII 199 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~~~~ 199 (397)
....+++++.|.+..+. +++...+.++..++.++.|+++||+ |||... +....+..++.++..+ ..+.+.+++
T Consensus 275 ~~P~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (452)
T PRK11273 275 WSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMA 352 (452)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHH
Confidence 34556666688887777 8888888899999999999999999 555433 2222223333222222 334444445
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHH-HHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHh
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGIL-AALVAGLPLAGNPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
+.++.|.+..........+..|.+|++.||++.|+.+....+|.. ++|.+.+.+.+. .||++.|++.++.+++.++..
T Consensus 353 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~-~g~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 353 CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-FGWDGGFMVMIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-hcchHHHHHHHHHHHHHHHHH
Confidence 555555543333333345678999999999999999888888765 478888888876 689999988887776665554
Q ss_pred c
Q 015968 279 G 279 (397)
Q Consensus 279 ~ 279 (397)
.
T Consensus 432 ~ 432 (452)
T PRK11273 432 I 432 (452)
T ss_pred H
Confidence 4
No 133
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.40 E-value=1.4e-11 Score=116.36 Aligned_cols=148 Identities=18% Similarity=0.186 Sum_probs=119.1
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..|.+.++.|.+.... +++.+...++..+++++.|++.||+|+|+++..+.++.+++.+... + ...+....++.|
T Consensus 222 ~lp~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 222 LMPLYLNHQGMSDASI--GFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 4565666778887777 8889999999999999999999999999999888888777665443 2 233445667778
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
++.....+.....+.|..|+++++...+.++....+|.++||.++|.+.+. .+|++.|++.+.+.++..+..+
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-YSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHH
Confidence 877777888888899999888778888888888999999999999999887 7899999888777766655543
No 134
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.40 E-value=2.1e-11 Score=118.77 Aligned_cols=159 Identities=18% Similarity=0.110 Sum_probs=114.9
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh--chH-H-HHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA--QSV-Q-TMII 199 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~~-~-~~~~ 199 (397)
....|.+.+++|.+.... .+......++..++.++.|+++||+|||++++.+.++.+++.++.+.. .+. + ..+.
T Consensus 291 ~~~~p~i~~~~g~~~~~~--~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIA--LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 345678888899887666 566667778889999999999999999999999999988887766543 111 1 2222
Q ss_pred HHHHHHHhhhhh-hhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC------CCCcchHHHHHHhHHHHH
Q 015968 200 GRVLAGIGIGIS-SAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA------GNPLWWRTMFGLAAIPSI 272 (397)
Q Consensus 200 ~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~~~~~w~~~~~~~~~~~~ 272 (397)
+.++.+++.+.. .+....++.|.+|+++|+.++++......+|.++++.+.+.+. +. .+|++.|++.+++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH-FHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh-ccCccHHHHHHHHHH
Confidence 334444444332 3566789999999999999999999998888888765554333 33 678888888877766
Q ss_pred HHHHHh-ccCCCCh
Q 015968 273 LLALGM-GLSPESP 285 (397)
Q Consensus 273 ~~~~~~-~~~~e~~ 285 (397)
+.+++. ++.||+.
T Consensus 448 ~~~~~~~~~~~e~~ 461 (479)
T PRK10077 448 LAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHhccccCC
Confidence 555544 4456664
No 135
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.39 E-value=1.4e-10 Score=109.36 Aligned_cols=223 Identities=19% Similarity=0.145 Sum_probs=142.7
Q ss_pred HhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccc-hHHHHHHhhHHHHHHHHHHHhhchHHH
Q 015968 118 YHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG-RTRTFQLDAVPLAAGAFLCATAQSVQT 196 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~ 196 (397)
...+...+..+...++.|++..+. |.+.++..+..+++++++|.++||.+ +|+++.+..++.++........++++.
T Consensus 16 ~~~G~~~p~~~~~L~~~G~s~~qI--G~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~ 93 (400)
T PF03825_consen 16 FAYGAFLPYLPLYLESRGFSGTQI--GILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWW 93 (400)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 335555667777778899999999 99999999999999999999999986 577887777877777777778888998
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHH-hhhcCCC--CcchHHHHHHhHHHHHH
Q 015968 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVA-GLPLAGN--PLWWRTMFGLAAIPSIL 273 (397)
Q Consensus 197 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~l~~~--~~~w~~~~~~~~~~~~~ 273 (397)
+++..++..+......+...++..+.... ++.-.|-.-.++.+|-+++... ++.+... ..+..+.+++.++..++
T Consensus 94 ~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l 171 (400)
T PF03825_consen 94 LFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLL 171 (400)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHH
Confidence 88888888888878888877777777653 3444555555555565554332 1111111 12233455666666655
Q ss_pred HHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHH
Q 015968 274 LALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQ 353 (397)
Q Consensus 274 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
.....+.+|+.|.....+.+ .++....+..+++|++.....++...+...
T Consensus 172 l~~~~l~lp~~~~~~~~~~~-----------------------------~~~~~~~~~~~llk~~~~~~Fll~~~l~~~- 221 (400)
T PF03825_consen 172 LAGFALFLPKTPPKRSAKES-----------------------------VKKLLGLDALKLLKNPRFLVFLLAAFLIGI- 221 (400)
T ss_pred HHHHHHhCCCCccccccCCC-----------------------------cccccchHHHHHhcCccHHHHHHHHHHHHH-
Confidence 55556667877621000000 000111223457777655544443333322
Q ss_pred HhhhhHHHHHhHHHHHHHcC-CChh
Q 015968 354 QLAGINAVVYYSTSVFRSVG-IESD 377 (397)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~g-~~~~ 377 (397)
.......|.+.++++.| ++..
T Consensus 222 ---~~~~~~~f~~~yl~~~gg~~~~ 243 (400)
T PF03825_consen 222 ---SHAAYYTFFSIYLQELGGYSGS 243 (400)
T ss_pred ---HHHHHHHHHHHHHHHcccchhh
Confidence 24556777888899988 5543
No 136
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.38 E-value=3e-11 Score=114.95 Aligned_cols=150 Identities=17% Similarity=0.112 Sum_probs=115.2
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHH-HhhHHHHHHHHHHHh-----hchHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQ-LDAVPLAAGAFLCAT-----AQSVQTMII 199 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~~~~ 199 (397)
..|.+.+++|.+..+. +++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+ .++.+.+++
T Consensus 244 ~~p~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 244 FLPMFVAELGFSTSEW--LQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 5566667899988877 88888899999999999999999999988764 333333333333221 246677777
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
..++.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+. .||+..+++.+++.++..++..
T Consensus 322 ~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 322 IAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-FGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHH
Confidence 88888988776554 3456677665 5799999999999999999999999999887 7899999988888776666554
Q ss_pred c
Q 015968 280 L 280 (397)
Q Consensus 280 ~ 280 (397)
|
T Consensus 399 ~ 399 (402)
T TIGR00897 399 F 399 (402)
T ss_pred H
Confidence 4
No 137
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.38 E-value=2.4e-11 Score=116.77 Aligned_cols=170 Identities=14% Similarity=0.010 Sum_probs=141.1
Q ss_pred HHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchH--HHHHHhhHHHHHHHHHHH
Q 015968 112 GAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRT--RTFQLDAVPLAAGAFLCA 189 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~~~ 189 (397)
..+.+++ .+++.....+..+++|++..+. ..+.-+..+..++|.+++|++.||+|.| ++++++.+++.+..+...
T Consensus 291 ~l~~dg~-~ti~~~~~i~a~~~lg~s~~~l--~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~ 367 (477)
T PF11700_consen 291 FLYSDGV-NTIISFAGIYATEVLGMSTTQL--IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGL 367 (477)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhcCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH
Confidence 3334444 3344455667777999999887 6777777888999999999999999999 899888888866665555
Q ss_pred h--------hchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchH
Q 015968 190 T--------AQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 190 ~--------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
+ .++.+.+.+.-++.|++.|+.++..-++.+++.|+.+.+..+|++....-..+++||++.+.+.+....-|
T Consensus 368 ~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r 447 (477)
T PF11700_consen 368 FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQR 447 (477)
T ss_pred HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 5 57888899999999999999999999999999999999999999999999999999999999988766689
Q ss_pred HHHHHhHHHHHHHHHHhccCCCC
Q 015968 262 TMFGLAAIPSILLALGMGLSPES 284 (397)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~e~ 284 (397)
+.++...++.++.++++++++.+
T Consensus 448 ~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 448 YGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred hHHHHHHHHHHHHHHHHhhccch
Confidence 99888888877777777666544
No 138
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.37 E-value=1.5e-11 Score=120.52 Aligned_cols=161 Identities=17% Similarity=0.110 Sum_probs=107.5
Q ss_pred hHHHHHHHhCCCchhhH---------HHH-HHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhch--
Q 015968 126 ALEYLAKDLGIAENTVL---------QGW-IVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS-- 193 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~-- 193 (397)
..|.+.++.|.+..... ... ...+..++..++.++.++++||+|||++++++.++.+++.++.++..+
T Consensus 310 ~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~ 389 (502)
T TIGR00887 310 NQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL 389 (502)
T ss_pred ccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46666678887643210 001 233344566678889999999999999998888887777665554321
Q ss_pred -HHHHHHHH-HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC---------cchHH
Q 015968 194 -VQTMIIGR-VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP---------LWWRT 262 (397)
Q Consensus 194 -~~~~~~~r-~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------~~w~~ 262 (397)
....++.. ++..++..+..+....+.+|.+|.+.|++++++.+....+|.++++.+.+.+.+.. .++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 469 (502)
T TIGR00887 390 STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGH 469 (502)
T ss_pred chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchH
Confidence 11111111 11222222344556677899999999999999999999999999999988877631 34456
Q ss_pred HHHHhHHHHHHHHHHhccCCCChH
Q 015968 263 MFGLAAIPSILLALGMGLSPESPR 286 (397)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~e~~~ 286 (397)
.|++.+++.++..+..+++||+..
T Consensus 470 ~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 470 VLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHHHHHheEeccCCC
Confidence 777777777666666667798754
No 139
>PRK09669 putative symporter YagG; Provisional
Probab=99.36 E-value=3e-11 Score=116.53 Aligned_cols=153 Identities=14% Similarity=0.109 Sum_probs=110.2
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc----cch-HHHHHHhhHHHHHHHHHHHhhch-----
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGR-TRTFQLDAVPLAAGAFLCATAQS----- 193 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Gr-r~~l~~~~~~~~~~~~~~~~~~~----- 193 (397)
..+..++.+++|++.... |.+..+..+..++..|+.|.++|| +|| |+.++.+.+..+++.++....++
T Consensus 30 ~~l~~~~t~~~gls~~~~--g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~ 107 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIM--GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATG 107 (444)
T ss_pred HHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 346678888999999888 999999999999999999999998 787 56666777777777665544432
Q ss_pred -HHHHHHHHHHHHHhhhhhhhhhhhhhhccc-CcccchhhhhHHHHHHHHHHHHHHHHhhh----cCC--CCcchHHHHH
Q 015968 194 -VQTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLP----LAG--NPLWWRTMFG 265 (397)
Q Consensus 194 -~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----l~~--~~~~w~~~~~ 265 (397)
.+.+++..++.+.+.........++.+|+. ++++|.+..++-..+..+|..+++.+... +.. ...+|+..+.
T Consensus 108 ~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~ 187 (444)
T PRK09669 108 KIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMM 187 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 455666666677766666667778999988 45778888777777777776666543322 221 1257888888
Q ss_pred HhHHHHHHHHHHh
Q 015968 266 LAAIPSILLALGM 278 (397)
Q Consensus 266 ~~~~~~~~~~~~~ 278 (397)
+.+++.++..+..
T Consensus 188 i~~ii~~v~~~~~ 200 (444)
T PRK09669 188 VMGLLGVVLFFCC 200 (444)
T ss_pred HHHHHHHHHHHHH
Confidence 8777775554433
No 140
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.36 E-value=2.2e-11 Score=118.39 Aligned_cols=152 Identities=17% Similarity=0.115 Sum_probs=108.6
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchH-------HHHHHhhHHHHHHHHHHHhhchHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRT-------RTFQLDAVPLAAGAFLCATAQSVQTMI 198 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 198 (397)
..+++.+++|++..+. +++.+++.++..++.+++|+++||+||| ..+.+..++.+++.++....++.+..+
T Consensus 275 ~p~~l~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 352 (476)
T PLN00028 275 IAEYFYDRFGLSLETA--GAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAI 352 (476)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 4556677789998887 8999999999999999999999999875 233333333334444445555666555
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHh
Q 015968 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
+.-++.+++.+...+...+++.+..| ++|+...|+.+.+..+|+++++.+.+ .+...+|+..|++.+++.++..++.
T Consensus 353 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 353 VVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHH
Confidence 55566677666565656666677655 67999999998888888888877654 2222579999999888877777666
Q ss_pred ccCC
Q 015968 279 GLSP 282 (397)
Q Consensus 279 ~~~~ 282 (397)
++.+
T Consensus 430 ~~~~ 433 (476)
T PLN00028 430 AFIH 433 (476)
T ss_pred Hhee
Confidence 6554
No 141
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.36 E-value=2.9e-11 Score=116.09 Aligned_cols=157 Identities=22% Similarity=0.200 Sum_probs=119.4
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc----ccchHH-HHHHhhHHHHHHHHHHHhh-c------
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGRTR-TFQLDAVPLAAGAFLCATA-Q------ 192 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grr~-~l~~~~~~~~~~~~~~~~~-~------ 192 (397)
...+++.+.+|++.... |.+..+.-+..++..|+.|.++| |+|||+ .++++.+..+++.+++... +
T Consensus 23 ~~~~f~~~~~gl~~~~~--g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALA--GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 46678888889999877 99999999999999999999999 899655 5567888888888777655 3
Q ss_pred -hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCc-ccchhhhhHHHHHHHHHHHHHHHHhhhcCCC----C--cchHHHH
Q 015968 193 -SVQTMIIGRVLAGIGIGISSAIVPLYISEISPT-EIRGALGSVNQLFICVGILAALVAGLPLAGN----P--LWWRTMF 264 (397)
Q Consensus 193 -~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~--~~w~~~~ 264 (397)
....+++..++..++.........++..|+.+. ++|.+..+.-..+..+|.++...+.+.+... . .+|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 223456666777888888888888999999984 6899888888888888886555555554421 1 1799999
Q ss_pred HHhHHHHHHHHHHh-ccCCC
Q 015968 265 GLAAIPSILLALGM-GLSPE 283 (397)
Q Consensus 265 ~~~~~~~~~~~~~~-~~~~e 283 (397)
++.+++.++..++. +..+|
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhheeee
Confidence 88888876665544 44566
No 142
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=7.4e-11 Score=113.13 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=100.3
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..|.+.++.|.+.... +.+.+.+.++..++.++.|+++||+|||+.+..+.++.++..++....++.....+.-++.|
T Consensus 253 ~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (426)
T PRK12307 253 LLPTYLAGEGFDTGVV--SNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFG 330 (426)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 4555556678887766 88888899999999999999999999999998888777666554443322111122223333
Q ss_pred H--hhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHH
Q 015968 206 I--GIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (397)
Q Consensus 206 ~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~ 266 (397)
+ +..+..+..+.++.|.+|++.|++++|+......+|..++|++.+.+.+. .|+....++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~-~g~~~~~~~ 392 (426)
T PRK12307 331 LMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT-MGLGAALTF 392 (426)
T ss_pred HHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc-ccHHHHHHH
Confidence 3 22233445667889999999999999999999999999999999998876 565554333
No 143
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=3e-11 Score=116.10 Aligned_cols=151 Identities=19% Similarity=0.118 Sum_probs=104.5
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc--ch-HHHHHHhhHHHHHHHHHHH--hhchHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF--GR-TRTFQLDAVPLAAGAFLCA--TAQSVQTMIIG 200 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--Gr-r~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~ 200 (397)
..+++.+++|++..+. ++..+.+.++..++.++.|+++||+ ++ |.......+...+..+... ...+...+.+.
T Consensus 266 ~p~~l~~~~g~s~~~a--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK11663 266 GNLYMSETLGVDLVTA--NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAAC 343 (434)
T ss_pred HHHHHHhccCCCHHHH--HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 4445557789998887 8889999999999999999999999 33 3332222222111111111 12233333344
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
.+..|++..........++.|.+|+++|++++|+.++...+|..++|.+.+.+.+. .||+..|++.+++.++..+..+
T Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~-~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 344 FFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI-WHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh-cccHHHHHHHHHHHHHHHHHHH
Confidence 44455543333333345678999999999999999999999999999999998887 7899999988888766655443
No 144
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.33 E-value=6.8e-11 Score=115.24 Aligned_cols=156 Identities=12% Similarity=0.135 Sum_probs=118.0
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHH-HHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHH---Hhh-chHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVS-SLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---ATA-QSVQTMII 199 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~ 199 (397)
...+++.+++|.+..+. +++.. ...++.+++.+++|+++||+|+|+.+.++.++.++..++. +.. ++.+.+.+
T Consensus 244 ~~~~~l~~~~G~s~~~~--g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~ 321 (491)
T PRK11010 244 LTTTFLIRGVGFDAGEV--GLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGA 321 (491)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 35566677899998888 88874 5567899999999999999999988877666555544322 232 35555555
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
..++..++.|...+...++..+..+++.+++..++.+....+|..+++.+.|.+.+. .||+..|.+.++++++.++...
T Consensus 322 ~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-~G~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 322 AVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-HGWPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHH
Confidence 556655555555566678888999998899999999999999988887888888876 6899999888888877766665
Q ss_pred cCCC
Q 015968 280 LSPE 283 (397)
Q Consensus 280 ~~~e 283 (397)
++++
T Consensus 401 ~~~~ 404 (491)
T PRK11010 401 VCRQ 404 (491)
T ss_pred HHHh
Confidence 5443
No 145
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.32 E-value=1e-10 Score=112.47 Aligned_cols=155 Identities=15% Similarity=0.026 Sum_probs=99.2
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH--h--hchHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA--T--AQSVQTMII 199 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~ 199 (397)
....+++.+++|.+..+. ++..++..++..++.++.|+++||+|||++++++.++.++..+... . .++....+.
T Consensus 264 ~~lp~~l~~~~g~s~~~~--~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 264 TYMQKYLVNTAGMHANVA--SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 334556667789887777 7888887788888999999999999999988776665444332221 1 223332222
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHH-HHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHh
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICV-GILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
.-++.+++.+...+....+++|++|++.|++++|+.+....+ .+...|.+.+.+... ..|...+++.++..++.++..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~-g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI-GMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHHHHH
Confidence 222233333344455667889999999999999998765443 233467777655332 346666666666666555554
Q ss_pred ccC
Q 015968 279 GLS 281 (397)
Q Consensus 279 ~~~ 281 (397)
+++
T Consensus 421 ~~l 423 (432)
T PRK10406 421 LML 423 (432)
T ss_pred HHh
Confidence 444
No 146
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.32 E-value=4.6e-11 Score=113.46 Aligned_cols=133 Identities=8% Similarity=0.076 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 223 (397)
+++.++..+...++.++.|++.||+|+|+.++++.++.++..++....++.+.+++.+++.|++..........++.+..
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 336 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 78888888888999999999999999999999999988888887778889998899999999988777666777888888
Q ss_pred CcccchhhhhH-HHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 224 PTEIRGALGSV-NQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 224 ~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
+++.+++..+. ++....+|.+++++++|.+.+. .||+..|++.+++.++..+.
T Consensus 337 ~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 337 DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-IGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 88888776665 6778899999999999999887 78999999988887665554
No 147
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=7e-11 Score=111.84 Aligned_cols=128 Identities=19% Similarity=0.102 Sum_probs=105.6
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 203 (397)
....|.+.+++|.+..+. +++.+...++..++.++.|+++||+|||+.+....+...+..++.....+.+.+++..++
T Consensus 270 ~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (398)
T TIGR00895 270 TNWLPKLMVELGFSLSLA--ATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAI 347 (398)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 345678888899988777 899999999999999999999999999955444444333333333335677777888899
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
.|++.+...+...+++.|.+|+++|++++++......+|..+||.++|.+
T Consensus 348 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 348 AGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999999998865
No 148
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.31 E-value=1.6e-10 Score=109.26 Aligned_cols=144 Identities=15% Similarity=0.067 Sum_probs=117.5
Q ss_pred HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHh
Q 015968 128 EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIG 207 (397)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 207 (397)
+.+.++.|.+..+. +++.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+..++.+.+++..++.|++
T Consensus 229 ~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 229 AIYWQAAGYSASTI--GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT 306 (382)
T ss_pred HHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 33446789987777 8888888889999999999999999999999999999998888888889999999999999999
Q ss_pred hhhhhhhhhhhhhcccCcccchhhhhHHH-HHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH
Q 015968 208 IGISSAIVPLYISEISPTEIRGALGSVNQ-LFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 276 (397)
.+...+....++.+. +++++++..+.+. ....+|..+||.++|.+.+. .|+ ..|+..+++.++.++
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~-~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH-LGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccH-HHHHHHHHHHHHHHH
Confidence 988888888888887 4555688888775 55677889999999999887 566 455555655554443
No 149
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.31 E-value=2.2e-10 Score=111.37 Aligned_cols=157 Identities=12% Similarity=0.107 Sum_probs=109.7
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc----ccch-HHHHHHhhHHHHHHHHHHHhhc------hH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGR-TRTFQLDAVPLAAGAFLCATAQ------SV 194 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~ 194 (397)
+..++.+.+|++.... |.+..+.-+.-++..|+.|.++| |+|| |+.++++.+..+++.+++...+ .+
T Consensus 29 l~~yyt~v~Gls~~~v--g~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~ 106 (473)
T PRK10429 29 LMYYYTDVVGLSVGLV--GTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQY 106 (473)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHH
Confidence 5567777889998887 99999999999999999999999 6698 6777778888777766554322 13
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhccc-CcccchhhhhHHHHHHHHHHHHHHHHhhh----cC--CCCcchHHHHHHh
Q 015968 195 QTMIIGRVLAGIGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLP----LA--GNPLWWRTMFGLA 267 (397)
Q Consensus 195 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----l~--~~~~~w~~~~~~~ 267 (397)
..+++..++.+++.........++..|+. ++++|.+..++-..+..+|..+.+.+... +. +...+|++..++.
T Consensus 107 ~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~ 186 (473)
T PRK10429 107 VFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVL 186 (473)
T ss_pred HHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 34555666777777777888888999998 57889988887556566654444433322 11 1124688877777
Q ss_pred HHHHHHHHHHh-ccCCCC
Q 015968 268 AIPSILLALGM-GLSPES 284 (397)
Q Consensus 268 ~~~~~~~~~~~-~~~~e~ 284 (397)
+++.++..+.. +..+|.
T Consensus 187 ~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 187 IAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHcCceec
Confidence 77665544433 335554
No 150
>PRK10504 putative transporter; Provisional
Probab=99.29 E-value=1.6e-10 Score=112.32 Aligned_cols=130 Identities=12% Similarity=0.093 Sum_probs=105.1
Q ss_pred hhhHHHHHH-HhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh---chHHHHHH
Q 015968 124 NGALEYLAK-DLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---QSVQTMII 199 (397)
Q Consensus 124 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~ 199 (397)
....|++.+ .+|.+.... +++.....++..++.++.|++.||+|||+++..+.++.++..++..+. ++.+.+.+
T Consensus 281 ~~~~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (471)
T PRK10504 281 PFMTPVFLQIGLGFSPFHA--GLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPF 358 (471)
T ss_pred HHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHH
Confidence 335565544 578887777 888888888888888999999999999999999988888776665543 34444555
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
..++.|++.+..++....++.+..|+++++.+.++.++...+|..+|+.+++.+.+
T Consensus 359 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 359 VLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778888888888888999999999999999999999999999999998887654
No 151
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.28 E-value=4.7e-11 Score=111.27 Aligned_cols=153 Identities=27% Similarity=0.322 Sum_probs=130.4
Q ss_pred hHHHHHHHhC----CCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-cchHHHHHHhhHHHHHHHHHHHhhc--hHHHHH
Q 015968 126 ALEYLAKDLG----IAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMI 198 (397)
Q Consensus 126 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~ 198 (397)
+.-++..+++ ++++++ .-+.+.|..---+.++++||++|| +|+|+.++.|.++++++.++.+.+. +...++
T Consensus 44 L~~Yl~~~~~~gLg~~~~~A--~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~ 121 (498)
T COG3104 44 LILYLYYQLGDGLGFDETHA--TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLY 121 (498)
T ss_pred HHHHHHHhccccCCcChHhh--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHH
Confidence 5567777777 888877 666777766666788999999999 5999999999999999999998884 788899
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcccCccc--chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH
Q 015968 199 IGRVLAGIGIGISSAIVPLYISEISPTEI--RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 276 (397)
++-++.++|.|..=+....+++|.+|+++ |-..+++++++.++|++++|++.+.+.+. .||...|.+.++-..+.++
T Consensus 122 i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~-~g~~~gF~~aavGm~~gl~ 200 (498)
T COG3104 122 IGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN-YGWHVGFGLAAVGMIIGLV 200 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998754 56788899999999999999999999887 8999999888877776666
Q ss_pred HhccC
Q 015968 277 GMGLS 281 (397)
Q Consensus 277 ~~~~~ 281 (397)
..+..
T Consensus 201 ~f~~~ 205 (498)
T COG3104 201 IFLLG 205 (498)
T ss_pred HHHHc
Confidence 55543
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.27 E-value=2.4e-10 Score=105.19 Aligned_cols=155 Identities=17% Similarity=0.148 Sum_probs=129.0
Q ss_pred hhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh-hchHHHHHH
Q 015968 121 GVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT-AQSVQTMII 199 (397)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~ 199 (397)
..++++-|.+++..|++.+.. +++.-.|.++..+|..++|+++|| +.|+.+.....+.++..+...+ .++.+..++
T Consensus 229 ~~ftYi~P~L~~v~g~s~~~v--s~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~ 305 (394)
T COG2814 229 ALYTYIRPFLESVAGFSVSAV--SLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALA 305 (394)
T ss_pred hhHHhHHHHHHHccCCCHhHH--HHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 355668899999999998888 999999999999999999999999 9999988887777777665554 456666777
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
.-++.|+..+.........+++ ..++.+..+.+++....++|..+|..++|.+.++ .|+....++.+++.++.+++.+
T Consensus 306 ~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 306 LLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHH
Confidence 7777888877766666667777 3356689999999999999999999999999998 9999999999888877776654
Q ss_pred c
Q 015968 280 L 280 (397)
Q Consensus 280 ~ 280 (397)
.
T Consensus 384 ~ 384 (394)
T COG2814 384 L 384 (394)
T ss_pred H
Confidence 3
No 153
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.27 E-value=9.5e-11 Score=106.92 Aligned_cols=178 Identities=15% Similarity=0.082 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHH
Q 015968 104 PFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (397)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~ 183 (397)
...++..-..+.++.+ ++++....+-..++|++..+. .++.....+..++|++++|+|.||+|.|+++.++.+++.+
T Consensus 254 i~~FLiA~~~~~DGv~-til~~~~~fg~~~~gls~~~l--ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~ 330 (438)
T COG2270 254 LVLFLIARFFYIDGVN-TILAMGGVFGAADLGLSSTEL--LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSI 330 (438)
T ss_pred hHHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHH
Confidence 3444445555555553 333444455566999999888 7777778888999999999999999999999999999998
Q ss_pred HHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHH
Q 015968 184 GAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTM 263 (397)
Q Consensus 184 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 263 (397)
.++...+......+.++-.+.|.+.|+.++..-+|.++..|+++-++.+|+++.....++++||++.+.+.+....-|..
T Consensus 331 ~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g 410 (438)
T COG2270 331 AALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAG 410 (438)
T ss_pred HHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhH
Confidence 88877777777777788899999999999999999999999998899999999999999999999999988776778888
Q ss_pred HHHhHHHHHHHHHHhccCCCC
Q 015968 264 FGLAAIPSILLALGMGLSPES 284 (397)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~e~ 284 (397)
+....++.++.+++++.+|+.
T Consensus 411 ~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 411 VLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhhHhhEEeecCC
Confidence 877777777777777777655
No 154
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=3.5e-10 Score=108.75 Aligned_cols=132 Identities=15% Similarity=0.032 Sum_probs=94.1
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHH-H---HhhchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL-C---ATAQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~r 201 (397)
...++++.+|.+..+. +++...+.++..++.+++|+++||+|||++++++.++.++..++ . ...+++..+.+..
T Consensus 261 ~p~~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
T PRK15075 261 TPTFGKTVLHLSAADS--LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVE 338 (434)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 3344555689988777 78888888889999999999999999999988765554332221 1 1123444444445
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHH-HHHHHHHHHHHHhhhcCCCCcch
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQL-FICVGILAALVAGLPLAGNPLWW 260 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~~w 260 (397)
++.|++.+...+....++.|.+|++.|+.++++.+. +..+++.++|.+.+.+.+. .|+
T Consensus 339 ~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~-~g~ 397 (434)
T PRK15075 339 LWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV-TGD 397 (434)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh-cCC
Confidence 666777766666667889999999999999998544 4445567788888887765 443
No 155
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.26 E-value=4.5e-10 Score=101.12 Aligned_cols=156 Identities=21% Similarity=0.204 Sum_probs=103.3
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..-.+-+++|++..+. +.+....++..++..++.|.++||+|||+.-++..++.+++++. -..+++..++++|++.|
T Consensus 56 Y~Y~LY~~yg~~~~qI--a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgG 132 (354)
T PF05631_consen 56 YLYALYESYGFSEHQI--AILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGG 132 (354)
T ss_pred hhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHH
Confidence 4444557899999888 88888888889999999999999999999999999999988864 45588999999999999
Q ss_pred Hhhhhhhhhhhhh-hhccc----CcccchhhhhHHH-HHHHHHHHHHHHHhhhcCCC-CcchHHHHHHhHHHHHHHHHHh
Q 015968 206 IGIGISSAIVPLY-ISEIS----PTEIRGALGSVNQ-LFICVGILAALVAGLPLAGN-PLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 206 ~~~~~~~~~~~~~-~~~~~----~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~-~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
++.+..+..--++ +.|.- |++..+.-++... ....+-.++..+++-.+.+. ..|-.+.|.....+.++..+++
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 9999888877654 45542 2222222222222 11122223333333333332 1234667766666665555444
Q ss_pred cc-CCCC
Q 015968 279 GL-SPES 284 (397)
Q Consensus 279 ~~-~~e~ 284 (397)
.. .+|.
T Consensus 213 ~~~W~EN 219 (354)
T PF05631_consen 213 LKTWPEN 219 (354)
T ss_pred Hhccccc
Confidence 32 3444
No 156
>TIGR00898 2A0119 cation transport protein.
Probab=99.26 E-value=9.9e-11 Score=114.88 Aligned_cols=136 Identities=19% Similarity=0.111 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchH--HHHHHHHHHHHHhhhhhhhhhhhhhhcccC
Q 015968 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSV--QTMIIGRVLAGIGIGISSAIVPLYISEISP 224 (397)
Q Consensus 147 ~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 224 (397)
..+..+...++.++.+++.||+|||+++.++.++.+++.++..+.++. +..++..++.+++.+..++....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 334456677888999999999999999999999988888877776543 445555567777777788888899999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCCh
Q 015968 225 TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESP 285 (397)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 285 (397)
++.|+.++|+.+....+|.+++|.+.+ +.+ .++...+++.++..++..++.+++||+.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE--KWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH--HHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999999999999999999999999988 432 4567777777877777777777788874
No 157
>PRK11462 putative transporter; Provisional
Probab=99.26 E-value=1.1e-09 Score=105.77 Aligned_cols=152 Identities=16% Similarity=0.147 Sum_probs=111.2
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc----cchH-HHHHHhhHHHHHHHHHHHhhch------
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGRT-RTFQLDAVPLAAGAFLCATAQS------ 193 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grr-~~l~~~~~~~~~~~~~~~~~~~------ 193 (397)
.+..++.+.+|++.... |.+..+.-+.-++..|+.|.++|| +||| +.++++.+..+++.+++-..++
T Consensus 31 ~l~~fyt~~~Gl~~~~~--g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~ 108 (460)
T PRK11462 31 YMMFFYTDIFGIPAGFV--GTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGK 108 (460)
T ss_pred HHHHHHHHhhCCCHHHH--HHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchH
Confidence 35667778899998877 999999999999999999999995 7875 5666777778777766554432
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcccC-cccchhhhhHHHHHHHHHHHHHHHHhhhcCC------CCcchHHHHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGLPLAG------NPLWWRTMFGL 266 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~~~w~~~~~~ 266 (397)
...+++..++..++.........++.+|+.+ +++|.+..++-..+..+|..+++++...+.. ...+|+....+
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i 188 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAV 188 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 3445566667788877777778888999987 6889999999888888887776665433221 11368887777
Q ss_pred hHHHHHHHHHHh
Q 015968 267 AAIPSILLALGM 278 (397)
Q Consensus 267 ~~~~~~~~~~~~ 278 (397)
.+++.+++.++.
T Consensus 189 ~~ii~~i~~~i~ 200 (460)
T PRK11462 189 LSVVAFMMLAFC 200 (460)
T ss_pred HHHHHHHHHHHH
Confidence 776665554433
No 158
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.26 E-value=6.4e-11 Score=110.72 Aligned_cols=129 Identities=17% Similarity=0.271 Sum_probs=113.5
Q ss_pred hHHHHHHH-hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhch-HHHHHHHHHH
Q 015968 126 ALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS-VQTMIIGRVL 203 (397)
Q Consensus 126 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l 203 (397)
..|.+.++ +|.+..+. +++.....++..++.++.+++.||+|||+.+..+.++.+++.++..+.++ .+.+++..++
T Consensus 233 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHY--GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFA 310 (365)
T ss_pred HhHHHHHHHhCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHH
Confidence 45655554 89888777 89999999999999999999999999999999888888888877777764 8888888999
Q ss_pred HHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC
Q 015968 204 AGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN 256 (397)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 256 (397)
.|++.+...+....++.|.+|+++|+++.++.+....+|..+++.+++.+.+.
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887653
No 159
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.25 E-value=6e-11 Score=114.20 Aligned_cols=158 Identities=16% Similarity=0.110 Sum_probs=103.3
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH---HHHHHHHh--hchHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA---AGAFLCAT--AQSVQTMI 198 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~---~~~~~~~~--~~~~~~~~ 198 (397)
.....++++..|.+..+. ++....+.++..++.+++|+++||+|+++....+.++.. ++.+.... ..+.+...
T Consensus 272 ~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T TIGR00712 272 DWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDM 349 (438)
T ss_pred HhHHHHHHHccCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 334456666678888777 888888999999999999999999975432222322221 11122122 12344344
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHH-HHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH-
Q 015968 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVG-ILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL- 276 (397)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~- 276 (397)
+..++.|++..+..........|.+|+++|+.+.|+.+....+| .+++|.+.+.+.+. .||.+.|++.+++.++..+
T Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~-~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 350 ICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-FGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh-ccchHHHHHHHHHHHHHHHH
Confidence 44455555432222222345779999999999999998877776 56899999998876 6899999887766655544
Q ss_pred HhccCCCC
Q 015968 277 GMGLSPES 284 (397)
Q Consensus 277 ~~~~~~e~ 284 (397)
..+++||+
T Consensus 429 ~~~~~~~~ 436 (438)
T TIGR00712 429 LIVVMIGE 436 (438)
T ss_pred HHHHHhhc
Confidence 34445665
No 160
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.25 E-value=3.2e-10 Score=110.21 Aligned_cols=149 Identities=22% Similarity=0.211 Sum_probs=131.3
Q ss_pred hHHHH-HHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYL-AKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
.+|.+ .+++|.+.... |++.+++.+|..+|.++.+++.+|+++++.+..+.++++++.+..+++++.+..++..++.
T Consensus 240 LlPl~a~~~l~~~a~~y--Gll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGY--GLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred hhhHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 45655 46688888777 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
|++.........+.+.+..|++.||+.++++.+....+..+|.++.|.+.+. .|-+..+.+.++..++..++
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~-~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH-FGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHH
Confidence 9999888888889999999999999999999999999999999999999887 78888887776655444443
No 161
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.24 E-value=5.7e-10 Score=102.02 Aligned_cols=145 Identities=16% Similarity=0.111 Sum_probs=111.3
Q ss_pred HhhchhhHHHHHH--HhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHH
Q 015968 120 LGVVNGALEYLAK--DLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTM 197 (397)
Q Consensus 120 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (397)
.+..++...++.+ .+|++..+. ++..+.+..++.+|.++.+++.||+|+|+++.++.++.+++.++....++...+
T Consensus 157 ~~~~~w~~~yl~~~~~~g~s~~~a--~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~ 234 (310)
T TIGR01272 157 VSAGSFLVNFLSDPHALGLPEDQA--AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM 234 (310)
T ss_pred HHHHHHHHHHHHhcccCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 3444445556653 368888888 899999999999999999999999999999988888888877666555544333
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHH
Q 015968 198 IIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP 270 (397)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~ 270 (397)
.+-++.|++.+..+|...+...+.+|++ .+.+.++. ....+|.++.|.+.|.+.+. .|.++.|++..++
T Consensus 235 -~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~-~g~~~a~~v~~~~ 303 (310)
T TIGR01272 235 -WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC-LGIQLAFALPVPC 303 (310)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh-ccchHHHHHHHHH
Confidence 4556889999999999998888888764 45666665 45668889999988888876 6788887744433
No 162
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.23 E-value=3.2e-10 Score=122.23 Aligned_cols=146 Identities=23% Similarity=0.302 Sum_probs=122.9
Q ss_pred hHHHHHHHhCCCch-hhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAEN-TVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
+..++.+.+|.+.. .. +++.+...++.+++.+++|+++||+++++++.++.++.+++.++..+..+.+.++++.++.
T Consensus 255 ~~~~~~~~~g~s~~~~~--g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQV--QYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLF 332 (1146)
T ss_pred hHHHHHHHhCCCcHHHH--HHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 55667788899887 66 8999999999999999999999999999999999888888888888888888888888999
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHH
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~ 273 (397)
|++.+...+...+++.+.+|++.||+++++.++...+|.++++.+++.+.....++...|++.+.+.++
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999998888889999999999999999999999999998888888776644324566666665554433
No 163
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.22 E-value=1e-10 Score=109.91 Aligned_cols=136 Identities=19% Similarity=0.239 Sum_probs=99.4
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccc-hHHHHH-Hhh-HHHHHHHHHHHh--hchHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG-RTRTFQ-LDA-VPLAAGAFLCAT--AQSVQTMIIG 200 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-rr~~l~-~~~-~~~~~~~~~~~~--~~~~~~~~~~ 200 (397)
...++.+++|.+..+. +++.+.+.++..++.++.|+++||++ +|+..+ ... ....++...... ..+...+++.
T Consensus 239 ~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (379)
T TIGR00881 239 SPLYLTQEKGFSKEKA--SWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLIC 316 (379)
T ss_pred HHHHHHHHhCCCHHHH--HHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHH
Confidence 4455667789988877 89999999999999999999999864 333222 211 112222222222 2345555666
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHH
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~ 264 (397)
.++.|+...+..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+. .||++.|
T Consensus 317 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~f 379 (379)
T TIGR00881 317 LFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG-FGWAGAF 379 (379)
T ss_pred HHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh-hcccccC
Confidence 67777766566666677889999999999999999999999999999999999887 7888754
No 164
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.22 E-value=4.7e-10 Score=97.68 Aligned_cols=176 Identities=16% Similarity=0.063 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH
Q 015968 103 LPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA 182 (397)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 182 (397)
|..+......+...+..+ .++..-|.+++.+|++.++. ..+...-.+|..+ .++.|.+.|++|.+.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~Gt~Y-~Fs~yS~~Lk~~l~~sq~~l--~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSGTTY-TFSAYSPQLKSRLGYSQSQL--NTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcCccc-chhhhhHHHHHHhCCCHHHH--HHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHH
Confidence 444444444444444322 34557789999999999888 8888888998876 4888999999999999999999999
Q ss_pred HHHHHHHhh-------chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 183 AGAFLCATA-------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 183 ~~~~~~~~~-------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
++..+..++ .++|.+.+..++.|.+.+...........+.||. +||++.|+.-...++++.+-..+...+..
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 998776653 3677777777888888776667766777789985 69999999999988887665555444443
Q ss_pred CCcchHHHHHHhHHHHHHHHHHhccCCCC
Q 015968 256 NPLWWRTMFGLAAIPSILLALGMGLSPES 284 (397)
Q Consensus 256 ~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 284 (397)
. ..-...+.+.....++.++..++++..
T Consensus 157 ~-~~~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 157 D-DPSSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred C-ChHHHHHHHHHHHHHHHHHHhhheecc
Confidence 3 233334333333344444555554433
No 165
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.3e-10 Score=110.73 Aligned_cols=161 Identities=20% Similarity=0.201 Sum_probs=142.8
Q ss_pred HhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccc--hHHHHHHhhHHHHHHHHHHHhhchHHHH
Q 015968 120 LGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG--RTRTFQLDAVPLAAGAFLCATAQSVQTM 197 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (397)
..+....++.+.++.+.+..+. +.+.++..+...++.++.|+++|+.. ++.++.++.++.+++.+.+.++++++.+
T Consensus 314 ~~~p~~~l~~~~~~~g~~~~~a--a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l 391 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKSLGLSSNDA--AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGL 391 (509)
T ss_pred HHHHHHHHHHHHhhcCCChhhh--HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3344447788888999999888 99999999999999999999999988 5667788888888888899999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 198 IIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
+..-++.|+..|........++.|+.+.++-..+.|+...+..++.++||.+++.+.+....|...|+..++..++..++
T Consensus 392 ~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 392 IVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL 471 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH
Confidence 99999999999999888888999999999889999999999999999999999988887667999999999988888877
Q ss_pred hccCC
Q 015968 278 MGLSP 282 (397)
Q Consensus 278 ~~~~~ 282 (397)
+++.+
T Consensus 472 ~~~~~ 476 (509)
T KOG2504|consen 472 LLILR 476 (509)
T ss_pred HHHhH
Confidence 76655
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.21 E-value=8.8e-10 Score=104.15 Aligned_cols=149 Identities=16% Similarity=0.138 Sum_probs=109.0
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH-hhchHHHHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA-TAQSVQTMIIGRVL 203 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~r~l 203 (397)
...+++.+.+|.+..+. +++.+...++..++.++.|++.||+|+|+.+..+.++.+++.++.. ..++.+..++..++
T Consensus 221 ~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T PRK10091 221 YIKPYMMFISGFSETSM--TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFI 298 (382)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 34567777789988877 8999999999999999999999999999999988888777775554 34555556666666
Q ss_pred HHHhhhhhhhhhh-hhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 204 AGIGIGISSAIVP-LYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 204 ~G~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
.+++.....+... ....+..+++.++.+ ..+....+|..+||.+++.+.+...+|++.+++.+++.++.+..
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 299 CCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 6666544444333 334444444444443 34567789999999999998886578999998887666554433
No 167
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1.5e-10 Score=105.46 Aligned_cols=154 Identities=21% Similarity=0.229 Sum_probs=123.0
Q ss_pred hchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc--chHHHH-HHhhHHHHHHHHHHHhhc--hHHH
Q 015968 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF--GRTRTF-QLDAVPLAAGAFLCATAQ--SVQT 196 (397)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--Grr~~l-~~~~~~~~~~~~~~~~~~--~~~~ 196 (397)
+......++.|..|.+..+. ++..+.|=++...|.+++|++|||+ |||... ++..++..++.+..-+++ |++.
T Consensus 271 i~dW~p~YL~e~k~~s~~~a--~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l 348 (448)
T COG2271 271 INDWGPLYLSEVKGFSLVKA--NWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLL 348 (448)
T ss_pred HhhhHHHHHHHhcCCCHHHH--HHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHH
Confidence 44446668888899999888 9999999999999999999999986 666555 444455555555555554 5688
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHH-HHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHH
Q 015968 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICV-GILAALVAGLPLAGNPLWWRTMFGLAAIPSILLA 275 (397)
Q Consensus 197 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 275 (397)
..++.++.|+..-+..-.+.....|..|++--|++.|+...+..+ |.+.+....+.+.+. .||...|++..+.+++..
T Consensus 349 ~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~-~gW~g~Fi~~~~~a~l~~ 427 (448)
T COG2271 349 DAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT-WGWDGGFIVLSIAALLAI 427 (448)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec-CCCcchHHHHHHHHHHHH
Confidence 888889999988777777777889999999889999999998888 888888888888777 899999988877776655
Q ss_pred HHh
Q 015968 276 LGM 278 (397)
Q Consensus 276 ~~~ 278 (397)
+++
T Consensus 428 lll 430 (448)
T COG2271 428 LLL 430 (448)
T ss_pred HHH
Confidence 544
No 168
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.20 E-value=4.3e-10 Score=107.31 Aligned_cols=145 Identities=13% Similarity=0.020 Sum_probs=98.2
Q ss_pred hhHHHHHHHh--CCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHH-HHHhhHHHHHHHHHHHhhchHHHHHHHH
Q 015968 125 GALEYLAKDL--GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRT-FQLDAVPLAAGAFLCATAQSVQTMIIGR 201 (397)
Q Consensus 125 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (397)
...|.+.+++ +.+..+. +++.....++..++.+++|+++||+|+|+. ++...++.+++.++.....+....+++-
T Consensus 263 ~~~p~~l~~~~~~~s~~~~--~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (412)
T TIGR02332 263 IWTPQILQSFNQGSSNIMI--GLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGI 340 (412)
T ss_pred HHHHHHHHhcCCCCcHHHh--HHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 3455555554 5565555 888999999999999999999999997764 4444444444333222222322222222
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
++.+++.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+...+|++.|++.++..
T Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 341 IMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 2333333333344445557889999999999999999999999999999998887556999988766543
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.20 E-value=1.3e-09 Score=103.37 Aligned_cols=147 Identities=18% Similarity=0.081 Sum_probs=109.3
Q ss_pred HHHHHHhCCCchhhHHHHHHHHHH-HHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh------hchHHHHHHH
Q 015968 128 EYLAKDLGIAENTVLQGWIVSSLL-AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT------AQSVQTMIIG 200 (397)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~ 200 (397)
+.+.+|.|++.++. +++..... ....++.++.|++.||+|+|+.+..+.++.++..+.... .++...++..
T Consensus 232 ~~~l~~~G~s~~~i--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 232 KLYLVDAGWPLEWI--GRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred hHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 44445689998888 88887765 466677899999999999999998877665333322211 1233444455
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCc-ccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPT-EIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
.++.+++.+...+.....+.+..++ +.+++.++..+....+|..+||.++|.+.+. .||+..|++.+++.++..+.
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-FGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHH
Confidence 5566677777777777777777766 7789999999999999999999999999876 68999998877766665443
No 170
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.20 E-value=2e-09 Score=102.15 Aligned_cols=147 Identities=12% Similarity=0.030 Sum_probs=113.8
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAG 205 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 205 (397)
..|.+.+++|.+..+. +++...+.++..++.++.+++.||.+++..+....+..++..++....++.+.+.+..++.|
T Consensus 239 ~~p~~~~~~g~s~~~~--g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G 316 (394)
T PRK10213 239 IRPVYMNLAGFGVDGL--TLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4577778889998777 88899999999999999999999965444344333334444455455667788888889999
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 276 (397)
++.+...+....++.+..| +++++..++......+|..+|+.++|.+.+. .|++..++..+++.++..+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~-~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN-IGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cChhhHHHHHHHHHHHHHH
Confidence 9998888888888888887 4467777888888899999999999999887 7888888777666544443
No 171
>PRK10054 putative transporter; Provisional
Probab=99.19 E-value=3.1e-10 Score=107.66 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=110.8
Q ss_pred HhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-chHHHHHHHHHHHHHhhhhh
Q 015968 133 DLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIGIS 211 (397)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~ 211 (397)
+.+.+.... +++...+.+.....+++.|++.||+++|+.+..+.++.+++.++..+. ++.+.+++..++.|++.+..
T Consensus 238 ~~~~~~~~~--g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 315 (395)
T PRK10054 238 DSDFAEKVV--AVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIY 315 (395)
T ss_pred ccchHHHHH--HHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHH
Confidence 344444444 777777777777778888999999999999999988888888777664 56777777888999998888
Q ss_pred hhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 212 SAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 212 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
.+....++.+..|++.|+.+.+..+ ...+|..+||.++|.+.+. .|....|++.+...++..++
T Consensus 316 ~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~-~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 316 APGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT-LPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred HhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH-cChhhHHHHHHHHHHHHHHH
Confidence 8888889999999999999888654 5568999999999999887 68888887765555444433
No 172
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.3e-09 Score=103.46 Aligned_cols=161 Identities=17% Similarity=0.107 Sum_probs=116.0
Q ss_pred hchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh---chHH---
Q 015968 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---QSVQ--- 195 (397)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~--- 195 (397)
.+......+-++.|++..+. .+......+...+..+++.++.||+|||+.++++..+..+..+++... .+..
T Consensus 288 ai~~Yst~i~~~aG~~~~~a--~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (485)
T KOG0569|consen 288 AIFFYSTSIFKTAGFTPEEA--QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSW 365 (485)
T ss_pred eeHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44456677888899998888 788888888899999999999999999999999999999888776543 1111
Q ss_pred ---HHHHHHHHHHHhhh-hhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 196 ---TMIIGRVLAGIGIG-ISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 196 ---~~~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
..+++.++..++.+ +.-|+..-+.+|++|++.|+.++++..+...++.++-.+.-..+.+. .|- +.|++..+.+
T Consensus 366 ~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~-~g~-~~filF~i~~ 443 (485)
T KOG0569|consen 366 LSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV-IGP-YVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc-hhhHHHHHHH
Confidence 12333344333332 23456667889999999999999998888888777665655555444 332 6666666666
Q ss_pred HHHHH-HhccCCCChH
Q 015968 272 ILLAL-GMGLSPESPR 286 (397)
Q Consensus 272 ~~~~~-~~~~~~e~~~ 286 (397)
++..+ ++..+|||..
T Consensus 444 ~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 444 AIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHhCcccCC
Confidence 55544 5566899953
No 173
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.18 E-value=1.4e-09 Score=100.63 Aligned_cols=264 Identities=15% Similarity=0.060 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHH-hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~ 183 (397)
..+.+|+..++..+ ...-....|++.+. .|++.++.. .-+.-...-.+.+..++...+.|.+|.|++++++.+...+
T Consensus 6 ~~~llc~~gf~~~f-rPsEPfl~~yL~~~~kn~T~~qv~-~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~ 83 (412)
T PF01770_consen 6 ITLLLCLFGFFKEF-RPSEPFLTPYLTGPDKNFTEEQVN-NEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYII 83 (412)
T ss_pred HHHHHHHHHHHHhc-CCCCccchHHHcCCccCCCHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 34445555555544 33334566777775 788887763 4555566667778888999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC-CcchHH
Q 015968 184 GAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN-PLWWRT 262 (397)
Q Consensus 184 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w~~ 262 (397)
..++..+.++...+-+..++.|++.+. ..+..+|+--..++++-.++.+...+...+|..++.++|-.+... ...++.
T Consensus 84 t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~ 162 (412)
T PF01770_consen 84 TWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQ 162 (412)
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999999755 566678888888887778888888888888888887777665542 356777
Q ss_pred HHHHhHHHHHHHHHHhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHH--HHhhcCC-CCCCccchhhhhcc--
Q 015968 263 MFGLAAIPSILLALGMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLD--LTNAGQG-SAEPEAGWFDLFSS-- 337 (397)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~-- 337 (397)
..++......+.++..+++|..++...-+++..+... ..+...++..+....+ ..+..+. ..+.+..++.++++
T Consensus 163 L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 241 (412)
T PF01770_consen 163 LNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFK 241 (412)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHH
Confidence 7777776666777777778776553221111111000 0000000000000000 0000000 11111122233332
Q ss_pred -chhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHc
Q 015968 338 -RYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSV 372 (397)
Q Consensus 338 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (397)
-+..+.++.+.+++....+|++-+.+|...+.++.
T Consensus 242 ~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v 277 (412)
T PF01770_consen 242 SCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTV 277 (412)
T ss_pred HHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 34556667777888888888898999988888877
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.17 E-value=6.1e-10 Score=107.14 Aligned_cols=112 Identities=19% Similarity=0.230 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-chHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIGISSAIVPLYISEI 222 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 222 (397)
+++..+..++..++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...++++|.
T Consensus 260 ~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (437)
T TIGR00792 260 SYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADT 339 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 677788889999999999999999999999999988888887776665 4566777777888999988888888898888
Q ss_pred cC-------cccchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 223 SP-------TEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 223 ~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
.+ ++.+|...++++....+|..+++.+.+.+.+
T Consensus 340 ~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 340 VDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred hhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 4456899999999999999999998887754
No 175
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.17 E-value=1.7e-10 Score=102.86 Aligned_cols=131 Identities=16% Similarity=0.144 Sum_probs=99.1
Q ss_pred HHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhh
Q 015968 152 AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGAL 231 (397)
Q Consensus 152 ~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 231 (397)
+.-..|.++.+++.||+|||+.+-..+++++++.++...+.+--...+.-|..-++..+.+.+.+.|..|.+|.+.|+++
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatg 471 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATG 471 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcc
Confidence 44667889999999999999999999999999998877765444444444444555566677788999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCCh
Q 015968 232 GSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESP 285 (397)
Q Consensus 232 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 285 (397)
.|.-.....+|+++.|+++... +. .-.....+.+.+.++..+..+++|-.+
T Consensus 472 vGtcSsmaRIggI~~p~iA~~~-e~--s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSPVIAMRA-EL--STSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhhHHhhhhhhhhHHHHHh-cc--ceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999998333 22 222334455666666667677776443
No 176
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.16 E-value=3e-09 Score=101.34 Aligned_cols=143 Identities=13% Similarity=0.092 Sum_probs=109.3
Q ss_pred HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-----chHHHHHHHHH
Q 015968 128 EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-----QSVQTMIIGRV 202 (397)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~ 202 (397)
.++.+++|.+..+. ++......++..++.++.|+++||+|+|+.+.++.++.+++.++..+. .+++.+++..+
T Consensus 240 ~~~~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 240 VILISGEQLSSYEY--GLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred HHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 34567789988777 787777778889999999999999999999988888777776665543 35666777888
Q ss_pred HHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH
Q 015968 203 LAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 274 (397)
+.|++.+...+......... ++++||+..+.++....+|..+|+.+++.+.+. .+|....+..++..++.
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG-GGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC-CchHHHHHHHHHHHHHH
Confidence 89999888776665554433 447899999999999999999999999998776 55555444444444443
No 177
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.16 E-value=1.1e-09 Score=106.36 Aligned_cols=153 Identities=19% Similarity=0.095 Sum_probs=104.2
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHH--------HHhhHHH--HHHHHHHHh-hchH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTF--------QLDAVPL--AAGAFLCAT-AQSV 194 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l--------~~~~~~~--~~~~~~~~~-~~~~ 194 (397)
...++.+.+|.+..+. +++.++..++..++.++.|+++||+++|+.. ..+.... ++..+.... ..+.
T Consensus 284 lp~~l~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (465)
T TIGR00894 284 LPTFISWVLRVSGKEN--GLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAF 361 (465)
T ss_pred HHHHHHHHhCcChHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 4456677789988887 9999999999999999999999998754221 1111111 111111122 2344
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC--cchHHHHHHhHHHHH
Q 015968 195 QTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP--LWWRTMFGLAAIPSI 272 (397)
Q Consensus 195 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~~w~~~~~~~~~~~~ 272 (397)
...+++-.+.+.+.+...+.......|..|+ .+|.+.++.+....+|+.++|.+.+.+.+.. .+|...|++.++..+
T Consensus 362 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~ 440 (465)
T TIGR00894 362 YLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNI 440 (465)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHH
Confidence 4444444555555555555555555677765 7899999999999999999999998877542 358999988888777
Q ss_pred HHHHHhccC
Q 015968 273 LLALGMGLS 281 (397)
Q Consensus 273 ~~~~~~~~~ 281 (397)
+..++..++
T Consensus 441 i~~i~~~~~ 449 (465)
T TIGR00894 441 LCVIFYLIF 449 (465)
T ss_pred HHHHHeeee
Confidence 776665544
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.15 E-value=1.1e-09 Score=117.81 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=117.8
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh--------------
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-------------- 191 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-------------- 191 (397)
...++.+.+|.+.... +++.+.+.++.+++.++.|+++++.++++.+..+.++.+++.+..++.
T Consensus 248 ~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 248 LPLLAKETLGGDENVA--TLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred hHHHHHHHcCCchHHH--HHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 4556667789988777 999999999999999999999998887776666666665555444432
Q ss_pred ------chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHH
Q 015968 192 ------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFG 265 (397)
Q Consensus 192 ------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~ 265 (397)
.+.+.+++..++.|++.+...+...+++.+.+|++.||+++|+.++...+|..+++++.+.+.....++.+.++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~ 405 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIIL 405 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 66777888889999999999988999999999999999999999999999999999998887644356777776
Q ss_pred HhHHHHHH
Q 015968 266 LAAIPSIL 273 (397)
Q Consensus 266 ~~~~~~~~ 273 (397)
+.+++.++
T Consensus 406 ~~~~~~~~ 413 (1140)
T PRK06814 406 FIALANLI 413 (1140)
T ss_pred HHHHHHHH
Confidence 65554433
No 179
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.15 E-value=5.1e-11 Score=102.47 Aligned_cols=154 Identities=18% Similarity=0.083 Sum_probs=120.2
Q ss_pred cchHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-cchHHHHHHh
Q 015968 99 SGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLD 177 (397)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~ 177 (397)
..+++..+..+|+..+..++.+-.......++..+.+++.++. .++.+.|..-..+.++++|++.|| +|-|..-++-
T Consensus 39 l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akf--tLlYsvYSwPNvVlcffgGflidr~fgir~gtii~ 116 (459)
T KOG4686|consen 39 LGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKF--TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL 116 (459)
T ss_pred hhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeee--eeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH
Confidence 3455666677777777666666655556667777778877777 788999999999999999999995 6877766666
Q ss_pred hHHHHHHHHHHH---hhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 178 AVPLAAGAFLCA---TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 178 ~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
.+...++.++++ ..+.+|++.++||+.|+|.-..-..-..|..-||..|+.+.++|+......+|+.+-..+.+++.
T Consensus 117 ~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly 196 (459)
T KOG4686|consen 117 CIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLY 196 (459)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHH
Confidence 666667776655 35789999999999999976666666789999999999999999999999999877555554443
No 180
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.12 E-value=9.3e-10 Score=100.47 Aligned_cols=164 Identities=19% Similarity=0.081 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHH
Q 015968 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA 185 (397)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 185 (397)
+.+.++..|-...... ..+..++.++|+++..+. +.+...+.+...+..+++|+++||+|.++++.+....++++.
T Consensus 223 lsllY~~tFG~Fvgfs--~~l~~~~~~~fg~~~~~A--g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~ 298 (417)
T COG2223 223 LSLLYFATFGGFVGFS--AYLPMYLVTQFGLSPVTA--GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAA 298 (417)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHhcCCChhhH--HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHH
Confidence 3334444444333222 335567889999999888 899999999999999999999999999999999999888888
Q ss_pred HHHHhh-------chHHH----HHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 186 FLCATA-------QSVQT----MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 186 ~~~~~~-------~~~~~----~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
.+.++. .+... ++...++.|+|.|.+ ..++..+|++ +-|...|+..+...+|+.+-|..-+...
T Consensus 299 ~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsv----fk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~ 373 (417)
T COG2223 299 ALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSV----FKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSL 373 (417)
T ss_pred HHHHccccccccCcchHHHHHHHHHHHHHhccCcchh----eeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHH
Confidence 777665 23333 444455566666554 4555566654 5799999999999999988888888777
Q ss_pred CCCcchHHHHHHhHHHHHHHHHHh
Q 015968 255 GNPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 255 ~~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
+....+...|++.....+++.+..
T Consensus 374 ~~tg~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 374 DLTGSYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHH
Confidence 765669999998888877776654
No 181
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.12 E-value=1.1e-08 Score=96.53 Aligned_cols=136 Identities=18% Similarity=0.297 Sum_probs=101.8
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-----chHHHHHHHH
Q 015968 127 LEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-----QSVQTMIIGR 201 (397)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r 201 (397)
...+.+++|.+..+. +++.+...++..++.++.|++.||+|+|+.+..+.++..++.++.... ++...+++..
T Consensus 230 ~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (385)
T TIGR00710 230 PFVYIDIMGVSPSVF--GLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPM 307 (385)
T ss_pred hHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 335566889988777 899999999999999999999999999999988887777776655543 2344555567
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHH-HHHHHHHHHhhhcCCCCcchHHHHHHh
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFIC-VGILAALVAGLPLAGNPLWWRTMFGLA 267 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~l~~~~~~w~~~~~~~ 267 (397)
++.|++.+...+....+..|.+| ++|+++.++.+.... +|.+.+++++ .+.+. .+|...++..
T Consensus 308 ~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~-~~~~~~~~~~ 371 (385)
T TIGR00710 308 MFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGN-TAWPMSLSCL 371 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hcccc-ChHHHHHHHH
Confidence 78899888888888888889887 568999998876654 5666777665 43332 4555544443
No 182
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.11 E-value=4.7e-09 Score=99.91 Aligned_cols=146 Identities=18% Similarity=0.225 Sum_probs=103.7
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHH-HHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHH---Hhh-chHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLL-AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---ATA-QSVQTMIIG 200 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~ 200 (397)
..+.+.+++|++..+. +++.+... ++..++.+++|++.||+|+|+.+.++.++.++..+.. ++. ++.+.+++.
T Consensus 232 ~~~~l~~~~G~~~~~~--g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 309 (402)
T PRK11902 232 STTFLIRGAGFSAGEV--GIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALA 309 (402)
T ss_pred HHHHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 3456777889998777 88876554 4688999999999999999998877776666554332 343 455555554
Q ss_pred H----HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHH
Q 015968 201 R----VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 201 r----~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 276 (397)
- ++.|++.+...+....++.+.+|.+.+ +.++....+|.++++.++|.+.+. .||++.|.+.++++++.++
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~-~G~~~~f~~~~~~~~~~~~ 384 (402)
T PRK11902 310 IGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEA-YGWPGFYLMTVVIALPGLA 384 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHH
Confidence 4 345666677777777888888776543 444445566666556678888777 8999999998888877665
Q ss_pred Hh
Q 015968 277 GM 278 (397)
Q Consensus 277 ~~ 278 (397)
+.
T Consensus 385 ~~ 386 (402)
T PRK11902 385 LL 386 (402)
T ss_pred HH
Confidence 54
No 183
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.09 E-value=7.6e-09 Score=97.01 Aligned_cols=150 Identities=17% Similarity=0.116 Sum_probs=100.2
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccch---HHHHHH-hhHHHHHHHHHHHhhchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR---TRTFQL-DAVPLAAGAFLCATAQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr---r~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~r 201 (397)
..|.+.++.|.+.. . +....+..+...++ .++++||..| |+.... ..++.++...+.++..+....+++-
T Consensus 214 wlp~~L~~~g~s~~-~--~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 287 (368)
T TIGR00903 214 WLEAALRPAGLEDI-A--GDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFI 287 (368)
T ss_pred HHHHHHHHCCCChH-H--HHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 34444466777754 3 56666655555555 4667776654 444332 3444444444445555554555555
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccC
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 281 (397)
++.|++....++...++.+|.+|++.|+++.|+.+....+|++++|++.+.+.. +-+..|.+.+++.++..+..++.
T Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~~~~~~~~ 364 (368)
T TIGR00903 288 GIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYFTFLAILITIAFAIALLL 364 (368)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhC
Confidence 667777777777788899999999999999999999999999888888876652 56777777777776666555444
Q ss_pred CCC
Q 015968 282 PES 284 (397)
Q Consensus 282 ~e~ 284 (397)
+++
T Consensus 365 ~~~ 367 (368)
T TIGR00903 365 PND 367 (368)
T ss_pred CCC
Confidence 443
No 184
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.08 E-value=3.3e-09 Score=99.21 Aligned_cols=133 Identities=15% Similarity=0.031 Sum_probs=101.9
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc-chHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
..|.+.++.|.+..+. +++.+.+.++..++.++.|+++||+ +||+.+.++.++.+++.++..+..+..... .-++.
T Consensus 219 ~lp~~~~~~g~~~~~~--g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 219 WLPAILISHGASAATA--GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 4565556789888777 8999999999999999999999999 567777777777777776666654433222 34678
Q ss_pred HHhhhhhhhhhhhhhhcccC-cccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchH
Q 015968 205 GIGIGISSAIVPLYISEISP-TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
|++.+..++.....+.+..+ +++++...++.+....+|..++|.+.+.+.+...+|.
T Consensus 296 g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 296 GLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 99998888887777766555 4556888898888888899999999999887644454
No 185
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.07 E-value=2.6e-09 Score=99.39 Aligned_cols=155 Identities=19% Similarity=0.209 Sum_probs=91.9
Q ss_pred Hhhchh-hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHH--HH-HHHHhh----
Q 015968 120 LGVVNG-ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA--GA-FLCATA---- 191 (397)
Q Consensus 120 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~--~~-~~~~~~---- 191 (397)
.++..+ ....+.++.|++.++. |.+.++..+...+.+|+.|.++||+|.||-++....+..+ +. +...+.
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~~i--G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~ 100 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGTEI--GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQ 100 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHccccCCCHHHH--HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334 4445666799999999 9999999999999999999999999977665544332221 22 211221
Q ss_pred chHH-HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHH
Q 015968 192 QSVQ-TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP 270 (397)
Q Consensus 192 ~~~~-~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~ 270 (397)
.|.+ ..+++-+..|++..+..++.-+++.++. +..+.-.|-.-+++.+|.+++..++|.+.+ .+-...||+..+.
T Consensus 101 ~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~--i~p~~~fwi~s~~ 176 (412)
T PF01306_consen 101 SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN--INPNIIFWIASAA 176 (412)
T ss_dssp TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee--eCccHHHHHHHHH
Confidence 2322 2222223334433344444444443332 223666777888899999999999998865 3456778876665
Q ss_pred HHHHHHHhcc
Q 015968 271 SILLALGMGL 280 (397)
Q Consensus 271 ~~~~~~~~~~ 280 (397)
+++..++.++
T Consensus 177 ~~il~lll~~ 186 (412)
T PF01306_consen 177 AIILLLLLLL 186 (412)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHH
Confidence 5554444333
No 186
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.07 E-value=3.9e-09 Score=100.38 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=110.8
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc-ccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD-KFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
..|.+.++.+.+..+. +++.+...++...+..+.+++.| |++.++.+..+.++.+++.++.++.++++.+++..++.
T Consensus 230 ~~p~~~~~~~~~~~~~--g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 307 (400)
T PRK11646 230 MLPIMVNDIAGSPSAV--KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLF 307 (400)
T ss_pred hhhhhHHhhcCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4555545544455555 78777777666655555566655 56767777788888888887778888888777778888
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc--c-hHHHHHHhHHHHHHHHHH
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL--W-WRTMFGLAAIPSILLALG 277 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~-w~~~~~~~~~~~~~~~~~ 277 (397)
|++.+...+...+++.+..|+++||+++++.+....+|..+||.++|.+.+... + ....+++.+++.++..+.
T Consensus 308 ~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 308 YIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 888888888888999999999999999999999999999999999999876521 2 234444445555444443
No 187
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.07 E-value=4.8e-09 Score=102.36 Aligned_cols=129 Identities=15% Similarity=0.136 Sum_probs=108.6
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh----hchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT----AQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~r 201 (397)
...++++.+|.+..+. +++.....++..++.++.|++.||+|||+++.++.++.+++..+..+ ..+++.++...
T Consensus 278 ~p~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (485)
T TIGR00711 278 LPLYLQQVLGYTALQA--GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQ 355 (485)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHH
Confidence 3345566689988888 89999999999999999999999999999999999888888877662 23566677778
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN 256 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 256 (397)
++.|++.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++
T Consensus 356 ~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 356 FIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999888877777778889999999999999999999999999988877543
No 188
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.06 E-value=1.6e-08 Score=95.43 Aligned_cols=156 Identities=19% Similarity=0.248 Sum_probs=118.2
Q ss_pred hHHHHHHHhC-CCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-chHHHHHHH---
Q 015968 126 ALEYLAKDLG-IAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-QSVQTMIIG--- 200 (397)
Q Consensus 126 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~--- 200 (397)
..+...++.| .+.... +.+.++..++-++.-.+.+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+.
T Consensus 229 f~~~yl~~~gg~~~~~~--g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l 306 (400)
T PF03825_consen 229 FFSIYLQELGGYSGSTI--GILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLL 306 (400)
T ss_pred HHHHHHHHcccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 4454556666 666555 667777777788888899999999999999999999999988888776 555444333
Q ss_pred -HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHH-HHHHHHHHHHHhhhcCCCCcc------hHHHHHHhHHHHH
Q 015968 201 -RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLPLAGNPLW------WRTMFGLAAIPSI 272 (397)
Q Consensus 201 -r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~~~~------w~~~~~~~~~~~~ 272 (397)
..++|+..+..+.....++.+..|++.|+++.++++.. .++|..+|.+++|.+.+. .| |...+.+.+++.+
T Consensus 307 ~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~-~g~~~~~~~~~~~~v~a~~~~ 385 (400)
T PF03825_consen 307 GQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA-FGARGMFDWSAVFLVFAVMAL 385 (400)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hcchhhhhHHHHHHHHHHHHH
Confidence 35699999999999999999999999999999998765 689999999999999875 33 4455555555554
Q ss_pred HHHH-HhccCCCC
Q 015968 273 LLAL-GMGLSPES 284 (397)
Q Consensus 273 ~~~~-~~~~~~e~ 284 (397)
+..+ ..++++|+
T Consensus 386 ~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 386 VILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHhhccCC
Confidence 4433 33344443
No 189
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.05 E-value=4e-09 Score=90.97 Aligned_cols=150 Identities=14% Similarity=0.093 Sum_probs=107.6
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHH-HHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA-FLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~ 204 (397)
....+++.||++.... +-+.+......++.+++.|.++||+|++.+.+.+..+..+.. ....++ .+.=.+...+.
T Consensus 287 g~~fF~~rfGlS~~~a--~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~l 362 (459)
T KOG4686|consen 287 GPMFFQKRFGLSAVSA--GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFL 362 (459)
T ss_pred hHHHHHHhhCCChhhc--cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHH
Confidence 4557889999999888 888888888889999999999999999988877765554433 332222 12223344567
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHH---HHHHhHHHHHHHHHHhc
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRT---MFGLAAIPSILLALGMG 279 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~---~~~~~~~~~~~~~~~~~ 279 (397)
|+.....-......++-..|.++.|++.|..+...++|-.+.|++++.+.+...++-+ .|.+.+.+++....+.+
T Consensus 363 GLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 363 GLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred hhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 7776555555567778888888899999999999999999999999999887444433 33344444444443333
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.04 E-value=9.7e-10 Score=102.25 Aligned_cols=140 Identities=14% Similarity=0.073 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 015968 143 QGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEI 222 (397)
Q Consensus 143 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 222 (397)
.|++.++..+.-++...+..++.+|+|.|+.++++.+++++=.++++++++.+.+.+.+.+.|+-.+.......-|+++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccchhhhhH-HHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHh-ccCCC
Q 015968 223 SPTEIRGALGSV-NQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGM-GLSPE 283 (397)
Q Consensus 223 ~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e 283 (397)
+|++..++...+ ++....+|.++.+.++|.+.++ .|.+..|++.+.+.+...++. +.+++
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~-~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR-IGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh-cCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 999887777766 4677889999999999999887 899999988887776655544 33433
No 191
>PRK10133 L-fucose transporter; Provisional
Probab=99.04 E-value=8.2e-09 Score=99.21 Aligned_cols=146 Identities=13% Similarity=0.006 Sum_probs=111.7
Q ss_pred hHHHH-HHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYL-AKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
..+++ ++.+|.+..+. ++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.++.+ .++..++.
T Consensus 281 ~~~~l~~~~~g~s~~~a--g~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 357 (438)
T PRK10133 281 LIRYAVEEIPGMTAGFA--ANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLC 357 (438)
T ss_pred HHHHHhhhcCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHH
Confidence 44454 45689998888 9999999999999999999999999999999988888777776666665543 34566789
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcc-hHHHHHHhHHHHHHHHHH
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW-WRTMFGLAAIPSILLALG 277 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-w~~~~~~~~~~~~~~~~~ 277 (397)
|++.+..+|...+...+.++++ .+.+.++..+. .+|..++|.+.+.+.+. .| -+..|++..+..+..++.
T Consensus 358 glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~~-~~g~~~~~~i~G~l~~~-~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 358 SAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVMT-IIGGGIVTPVMGFVSDA-AGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHHHHHHHcccchh-hccchhHHhHH-hccchHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988754 56777777643 45677777777777765 55 778887655555444443
No 192
>PRK09848 glucuronide transporter; Provisional
Probab=99.03 E-value=4e-08 Score=94.93 Aligned_cols=126 Identities=16% Similarity=0.253 Sum_probs=85.0
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc----chHHHH-HHhhHHHHHHHHHH-Hhh----c--h
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF----GRTRTF-QLDAVPLAAGAFLC-ATA----Q--S 193 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~----Grr~~l-~~~~~~~~~~~~~~-~~~----~--~ 193 (397)
+..++.+.+|++..+. |.+.....+..++..+++|+++||. |||+.+ +++.+...+..++. ... . .
T Consensus 31 l~~y~~~~~gl~~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (448)
T PRK09848 31 LLSYYTDVAGVGAAAA--GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSK 108 (448)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchH
Confidence 4567888889998887 9999999999999999999999986 777644 55655555444432 211 1 2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCc-ccchhhhhHHHH-----HHHHHHHHHHHHhhhc
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPT-EIRGALGSVNQL-----FICVGILAALVAGLPL 253 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-----~~~~g~~~~~~~~~~l 253 (397)
.+.+++..++.+++.+...+...++..++..+ ++|....++-.. +..+|..++|++++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 23344455677887777777767777776644 567766554433 2345566677776543
No 193
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.03 E-value=1.6e-07 Score=90.61 Aligned_cols=227 Identities=16% Similarity=0.123 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHH-hhHHHHHHHHHHHhh--chHHHHHHHHHHHHHhhhhhhhhhhhh
Q 015968 142 LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL-DAVPLAAGAFLCATA--QSVQTMIIGRVLAGIGIGISSAIVPLY 218 (397)
Q Consensus 142 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~-~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~ 218 (397)
..++..++..+..++..|+.|.++|+-|+||.++. ..++..+++++..+. .+++...+..++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677888888899999999999999997665544 445555566666653 345555555566667777888888899
Q ss_pred hhcccCcccc--------------------------hhhhhHHHHHHHHHHHHHHHHhhhcCCC-------CcchHHHHH
Q 015968 219 ISEISPTEIR--------------------------GALGSVNQLFICVGILAALVAGLPLAGN-------PLWWRTMFG 265 (397)
Q Consensus 219 ~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------~~~w~~~~~ 265 (397)
+.|+.+++.+ ++..+.-...+.+|+++.-++.-.+... ...-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999888 8888887777778877766655443211 133588888
Q ss_pred HhHHHHHHHHH-HhccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHH
Q 015968 266 LAAIPSILLAL-GMGLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVS 344 (397)
Q Consensus 266 ~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
+.++.-++..+ ..+++||.|+....+..........+++ ..+++++.|.+.....+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l-----------------------~~t~k~~~~~~~~~~fL 287 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRL-----------------------WRTFKEIRKLRQLFLFL 287 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHH-----------------------HHHHHHHHhChHHHHHH
Confidence 88877755554 4556777754210111111111111111 11233333333333333
Q ss_pred HHHHHHHHHHhhhhHHHHHhHHHHHH-HcCCChh--HHHHHHHHHHHHHhhhhc
Q 015968 345 VGAALFLFQQLAGINAVVYYSTSVFR-SVGIESD--VAASALVGAANVFGNYSI 395 (397)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~g~~~~ 395 (397)
++.+ ...-+++.+......+.. ++|++.. .....+..+..++|+++.
T Consensus 288 ia~~----l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~ 337 (477)
T PF11700_consen 288 IAYF----LYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLF 337 (477)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222 222345666666666665 5799876 444555666667776654
No 194
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.02 E-value=1.9e-08 Score=95.40 Aligned_cols=141 Identities=15% Similarity=0.048 Sum_probs=108.2
Q ss_pred HHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 015968 127 LEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGI 206 (397)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 206 (397)
.+++++.+|.+..+. |++.+...++..++.++.+++.||+++|+++..+. +.++..++.++.++++.+++..++.|+
T Consensus 229 ~~~~~~~lg~s~~~~--G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~ 305 (393)
T PRK11195 229 LAWAPVALGITLNQP--AYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGA 305 (393)
T ss_pred HHHHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345677789988887 99999999999999999999999999998887775 344444555666777777777788999
Q ss_pred hhhhhhhhhhhhhhcccCccc-chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHH
Q 015968 207 GIGISSAIVPLYISEISPTEI-RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP 270 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~ 270 (397)
+.+...+...+.+.+..|++. +|++.++.+....+|..++..+.+.+......+...|...+.+
T Consensus 306 ~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 306 LGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLL 370 (393)
T ss_pred hhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 988888778888888766554 6999999999999999999888886644323344444434444
No 195
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.02 E-value=7.8e-09 Score=94.54 Aligned_cols=92 Identities=20% Similarity=0.138 Sum_probs=77.3
Q ss_pred HhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC-----------
Q 015968 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNP----------- 257 (397)
Q Consensus 189 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------- 257 (397)
+...+++.++++.++.|.|.+...+..+.++++..+++++.+.+++.+.+..+|.+++|++++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 455789999999999999999999999999999999998999999999999999999999999776321
Q ss_pred ----cchHHHHHHhHHHHHHHHHHhcc
Q 015968 258 ----LWWRTMFGLAAIPSILLALGMGL 280 (397)
Q Consensus 258 ----~~w~~~~~~~~~~~~~~~~~~~~ 280 (397)
..|++.|++.+++.++..+.+.+
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36999998776665554444433
No 196
>PRK09848 glucuronide transporter; Provisional
Probab=99.01 E-value=8.7e-09 Score=99.54 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=95.9
Q ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc--hHHHHHHHHHHHHHh
Q 015968 130 LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGRVLAGIG 207 (397)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~ 207 (397)
+++.+|.+.... ++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|
T Consensus 255 ~~~~~g~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G 332 (448)
T PRK09848 255 VRYVLNDTGLFT--VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIG 332 (448)
T ss_pred EeeecCChHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHH
Confidence 344566654433 4444444667788999999999999999999999988888877766643 567777777889999
Q ss_pred hhhhhhhhhhhhhcccCcc-------cchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 208 IGISSAIVPLYISEISPTE-------IRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
.+...+...++.+|..+.+ .+|...+.++....+|..+|+.+.+.+.
T Consensus 333 ~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 333 QGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998889998888754 3488899999999999999888877654
No 197
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.00 E-value=9.7e-09 Score=96.02 Aligned_cols=113 Identities=12% Similarity=0.153 Sum_probs=91.4
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHH-HHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-----------ch
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLL-AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-----------QS 193 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----------~~ 193 (397)
..+.+.+++|.+..+. +.+.++.. ++..++.+++|++.||+|||+.++.+.++.++...+..+. ++
T Consensus 231 ~~~~~l~~~g~~~~~~--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 231 LTTLFLLDMGFSKEEI--ALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHHHcCCCHHHH--HHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 3444445589988877 77776655 5678999999999999999999988888887776655442 34
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFIC 240 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 240 (397)
.+.+..+.++.+++.+...+...+++.|.+|+++||+.+++.++..+
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 56777788899999999999999999999999999999999877543
No 198
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.00 E-value=1.5e-08 Score=99.20 Aligned_cols=127 Identities=13% Similarity=0.041 Sum_probs=108.9
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh---chHHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---QSVQTMIIGRV 202 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~ 202 (397)
...+++..+|.+..+. |+....+.++..++.++.|++.||+|+|+++..+.++.+++.++.... ++.+...+..+
T Consensus 282 ~~~~lq~v~g~s~~~a--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 359 (495)
T PRK14995 282 MAQELQFVHGLSPLEA--GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMA 359 (495)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 3456777789998888 999999999999999999999999999999998888887777655432 45666677788
Q ss_pred HHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 203 LAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
+.|++.|...+.....+.+..|+++++.+.++++....+|..+|+.+.+.+.
T Consensus 360 l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 360 LLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888888889999999999999999999999999999888764
No 199
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.96 E-value=1.5e-08 Score=97.29 Aligned_cols=128 Identities=26% Similarity=0.264 Sum_probs=105.7
Q ss_pred hhhHHHHHHH-hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc--hHHHHHHH
Q 015968 124 NGALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIG 200 (397)
Q Consensus 124 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 200 (397)
+...+++.++ +|.+ +.. +.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++.
T Consensus 245 ~~~~~y~~~~vl~~~-~~~--~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 321 (428)
T PF13347_consen 245 NTFLPYYFTYVLGNE-GLI--SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLIL 321 (428)
T ss_pred hhHHHHHHHHHhcCc-hhh--HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3344554444 5555 334 7788888999999999999999999999999999999999998888775 99999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcc-------cchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTE-------IRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
-++.|++.+..+....++++|..+.+ ..|...+.+....-+|..+++.+.+.+.
T Consensus 322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999988732 2378889998888888888888777654
No 200
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.96 E-value=5.1e-09 Score=97.38 Aligned_cols=122 Identities=28% Similarity=0.353 Sum_probs=101.9
Q ss_pred hhhHHH-HHHHhCCC-chhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh---chHHHHH
Q 015968 124 NGALEY-LAKDLGIA-ENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---QSVQTMI 198 (397)
Q Consensus 124 ~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 198 (397)
....|. +.+++|.+ ..+. +++.++..++..++.++.|+++||+|+|+.+........+..+...+. ++....+
T Consensus 226 ~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (352)
T PF07690_consen 226 SFFLPLYLQEVLGFSGPSQA--GLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLI 303 (352)
T ss_dssp HHHHHHHCCHHHHCCTHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHH
T ss_pred hcccchhhhhccCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 334555 48889998 5666 888999999999999999999999999888777777766666555443 4557777
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHH
Q 015968 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (397)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 247 (397)
+.-++.|++.+...+....++.|.+|+++|+++.++.+....+|..+||
T Consensus 304 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 304 IALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7888899999999999999999999999999999999999999999987
No 201
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.96 E-value=1.7e-08 Score=96.20 Aligned_cols=133 Identities=16% Similarity=-0.071 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH-hh-----chHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 015968 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA-TA-----QSVQTMIIGRVLAGIGIGISSAIVPLYIS 220 (397)
Q Consensus 147 ~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-~~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 220 (397)
..+..+...+..+++|+++||+|+|+++.++.++.+++..... .. .+++.+.+..++..++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 3344567788899999999999999999998887777664322 11 24555555544444444444444555666
Q ss_pred cccCc---------------------ccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 221 EISPT---------------------EIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 221 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
+.||+ ++-|.+.|+..+...+|+.+.|.+-+...+...++...|+...+..++++++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 66653 134788889999999988888866566555556788888888877776665544
No 202
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.96 E-value=1e-07 Score=89.74 Aligned_cols=124 Identities=10% Similarity=0.090 Sum_probs=87.9
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHH---Hh-hchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---AT-AQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~-~~~~~~~~~~r 201 (397)
....+.+++|.+..+. +++.+...++..++.++.|++.||+|||+.+..+.++..+..+.. .. ..+.+.+.++-
T Consensus 217 ~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T PRK11102 217 GPFVYIELNGVSPQNF--GYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGV 294 (377)
T ss_pred CHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3445667789988877 899999999999999999999999999999988876654433222 22 22444444444
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHH-HHHHHHHHHHHhhh
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLP 252 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~ 252 (397)
.+.+.+.+........++.|..| +.++.+.++.+.. ..+|..+++++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 295 AAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44455555555556667778776 6789888886654 56778888877654
No 203
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.95 E-value=3.9e-08 Score=88.96 Aligned_cols=155 Identities=28% Similarity=0.432 Sum_probs=120.5
Q ss_pred HhHhhchhhHHHHHHHhCCCc--hhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhch--
Q 015968 118 YHLGVVNGALEYLAKDLGIAE--NTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQS-- 193 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~-- 193 (397)
++........+.+..+++.+. ... ++..+.+.++..++.++.|.++||+|||+.++.+.....++.++.++..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLY--GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHH--HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 444454556777777777665 245 89999999999999999999999999998888888766666666666665
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcccCc-ccchhhhhHHHH-HHHHHHHHHHHHhhhcCCC-CcchHHHHHHhHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIVPLYISEISPT-EIRGALGSVNQL-FICVGILAALVAGLPLAGN-PLWWRTMFGLAAIP 270 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~-~~~w~~~~~~~~~~ 270 (397)
.+.+++.|++.|++.+...+....++.|+++. ++|+...+.... ...+|.++++++++.+... ..+|++.|++....
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 89999999999999999999999999999997 568888888877 5777888888776655432 25799977666655
Q ss_pred HHHH
Q 015968 271 SILL 274 (397)
Q Consensus 271 ~~~~ 274 (397)
....
T Consensus 174 ~~~~ 177 (338)
T COG0477 174 GLLL 177 (338)
T ss_pred HHHH
Confidence 5433
No 204
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.93 E-value=1.6e-07 Score=88.52 Aligned_cols=153 Identities=20% Similarity=0.216 Sum_probs=113.7
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc----ccch-HHHHHHhhHHHHHHHHHHHhhc------hH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGR-TRTFQLDAVPLAAGAFLCATAQ------SV 194 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~ 194 (397)
++-++.+.+|++.... |.+..+.=+--++.-|+.|.++| |+|| |+.++++.+..++.++++-.++ +.
T Consensus 35 Ll~fYTdv~Gis~~~a--G~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~ 112 (467)
T COG2211 35 LLFFYTDVFGLSAALA--GTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKL 112 (467)
T ss_pred HHHHHhcccCCcHHHH--HHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcch
Confidence 5567778899998777 88888888888999999999999 4786 5677888888888888877665 34
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhcccCc-ccchhhhhHHHHHHHHHHHHHHHHhhh----cCCC--CcchHHHHHHh
Q 015968 195 QTMIIGRVLAGIGIGISSAIVPLYISEISPT-EIRGALGSVNQLFICVGILAALVAGLP----LAGN--PLWWRTMFGLA 267 (397)
Q Consensus 195 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~----l~~~--~~~w~~~~~~~ 267 (397)
...++...+.+++.........++.+|+.+. +||.+..++-..+..+|..+..++... +.+. ..||+...++.
T Consensus 113 ~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~ 192 (467)
T COG2211 113 IYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVL 192 (467)
T ss_pred HHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHH
Confidence 4566677888999888888888899998754 778888888777777775543333322 2222 35888888888
Q ss_pred HHHHHHHHHHhcc
Q 015968 268 AIPSILLALGMGL 280 (397)
Q Consensus 268 ~~~~~~~~~~~~~ 280 (397)
+++.++..+..++
T Consensus 193 ~vi~~i~~l~~~~ 205 (467)
T COG2211 193 GVIGVILLLFCFF 205 (467)
T ss_pred HHHHHHHHHHHHH
Confidence 7777666655443
No 205
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.92 E-value=2.8e-08 Score=96.69 Aligned_cols=127 Identities=12% Similarity=0.006 Sum_probs=92.7
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh-----hchHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT-----AQSVQTMIIG 200 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 200 (397)
..+++.+...-+.... +++.+...++.+++.+++++++||+|+|+.+.++.++.+++.+...+ .++.+.+++.
T Consensus 253 ~~~y~~~y~~~~~~~~--~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 330 (473)
T PRK10429 253 FAIYYFTYVIGDADLF--PYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIA 330 (473)
T ss_pred heeeEEEEECCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHH
Confidence 3344444333233333 66777777888999999999999999999998888776666554432 3456667777
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCc-----cc--chhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPT-----EI--RGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~-----~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
-++.|++.+...+...++++|..+. .+ .|..++......-+|..+++.+.+.+.
T Consensus 331 ~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 331 GILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999998888888999998552 22 366888888888888888888777654
No 206
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.91 E-value=2.8e-08 Score=94.28 Aligned_cols=120 Identities=15% Similarity=0.141 Sum_probs=80.9
Q ss_pred HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHh
Q 015968 128 EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIG 207 (397)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 207 (397)
..+.+++|.+..+. +++.+...++..++.++.+++.||+|||+++.++.++..++.++..+.++.+..+....+.+.+
T Consensus 228 ~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 305 (392)
T PRK10473 228 VLLMEQMGFSRGEY--AIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAG 305 (392)
T ss_pred HHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567789988777 8888899999999999999999999999999999988888888777766555444444444444
Q ss_pred hhhhhhhhhhhhhcccCcccc-hhhhhHHHHHHHHHHHHHHHHhh
Q 015968 208 IGISSAIVPLYISEISPTEIR-GALGSVNQLFICVGILAALVAGL 251 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~~ 251 (397)
.+..++. ....+..|.++| +.+.++...+..+|+.+++.+.+
T Consensus 306 ~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 306 FSVGFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443333 233445554444 45555554444455544444443
No 207
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.88 E-value=2.7e-07 Score=84.79 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=97.3
Q ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccc-----hHHHHHH-hhHHHHHHHHHHHhh-----c------
Q 015968 130 LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG-----RTRTFQL-DAVPLAAGAFLCATA-----Q------ 192 (397)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~------ 192 (397)
+..|++++..-. +.+.++..+. ....+.+|..||+.+ ||..+++ |.++...+..+..++ .
T Consensus 6 MIvEL~vpA~lv--~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGVPAWLV--ALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhccHHHHH--HHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 456788876655 7777777664 456899999999999 8866644 455555555444332 2
Q ss_pred --hH---HHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchH
Q 015968 193 --SV---QTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 193 --~~---~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
.+ ....+...+.|+|.+.......++++|..|+++|+++.++......+|.+++.++.+.+.+....-|
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~r 156 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPER 156 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 11 2344556788999999999999999999999999999999999999999999999998877633333
No 208
>PRK11043 putative transporter; Provisional
Probab=98.86 E-value=5.3e-07 Score=85.77 Aligned_cols=128 Identities=13% Similarity=0.127 Sum_probs=96.1
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHH---Hh--hchHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLC---AT--AQSVQTMIIG 200 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~--~~~~~~~~~~ 200 (397)
..|.+.+++|.+..+. ++....+.++..++.++.+++.||+|+|+.+....++.+++.+.. .. .++.+.+++.
T Consensus 225 ~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 225 GSPFILEQMGYSPADI--GLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 3455667789988777 887778888889999999999999999987766555544443322 22 3455556666
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN 256 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 256 (397)
..+.|++.+..++.......+..| ++|+++.++++.....+...++.+.+.+.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 778888888888888877777776 5699999999988777777777777777654
No 209
>PRK09669 putative symporter YagG; Provisional
Probab=98.85 E-value=6.5e-08 Score=93.35 Aligned_cols=112 Identities=16% Similarity=0.145 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh--hchHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT--AQSVQTMIIGRVLAGIGIGISSAIVPLYISE 221 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 221 (397)
+.+.....++..++.+++++++||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+...+...++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566667778888899999999999999998887766654433222 3567777888889999999999999999998
Q ss_pred ccCcc-------cchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 222 ISPTE-------IRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 222 ~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
..+.+ ..|...+.+.....+|..+|+.+++.+.+
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87522 22667788888888998888888877654
No 210
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.82 E-value=5.3e-07 Score=81.08 Aligned_cols=173 Identities=16% Similarity=0.063 Sum_probs=129.1
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc-chHHHHHHhh
Q 015968 100 GVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQLDA 178 (397)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~l~~~~ 178 (397)
+..|.+.....+..+..+. . -..+|.+..|-|+|..+. |++.+...+......+....+.+|. .+|+..+...
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~---~-~~WLP~ili~~G~sa~~a--G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYI---V-IGWLPAILIDRGLSAAEA--GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred chhHHHHHHHHhhHHHHHH---H-HHHHHHHHHHcCCCHHHh--hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 4456565555555555433 2 235678888899999999 9999999999999999999999965 5777878888
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccc-hhhhhHHHHHHHHHHHHHHHHhhhcCCCC
Q 015968 179 VPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIR-GALGSVNQLFICVGILAALVAGLPLAGNP 257 (397)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 257 (397)
+++.++.+.+.+.+....+.- -++.|+|.|+.++.....+.+.....+. +.-.++.+....+=..+||.+.|++-+..
T Consensus 282 ~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 888888887777654333322 4899999999999999999988876544 44455555555555677899999998888
Q ss_pred cchHHHHHHhHHHHHHHHHHhc
Q 015968 258 LWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 258 ~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
.+|+...+..+...++..+.-+
T Consensus 361 gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 361 GSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred CChHHHHHHHHHHHHHHHHHHh
Confidence 8999988887777766665543
No 211
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.82 E-value=2.8e-07 Score=89.60 Aligned_cols=134 Identities=19% Similarity=0.111 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHHhhhh----hhcc-cchHHHH--HHhhHHHHHHHHHHHh---------hchHHHHHHHHHHHHHh
Q 015968 144 GWIVSSLLAGATVGSFTGGS----LADK-FGRTRTF--QLDAVPLAAGAFLCAT---------AQSVQTMIIGRVLAGIG 207 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~----l~d~-~Grr~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~~ 207 (397)
+++.++..+.-.+.+++..+ +.+| .+.+... .+|.++.+++.+..++ ..+++++++..++.|+|
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 67788877777777777554 4444 3334444 7788888888777664 46899999999999999
Q ss_pred hhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHh
Q 015968 208 IGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
+....+...+++++..|++.||+++|++.....+|..+++.+....... .+|.+.|...++..++..++.
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP-QGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cchhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888766554 578888877776665555443
No 212
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.80 E-value=7.3e-08 Score=91.99 Aligned_cols=175 Identities=21% Similarity=0.176 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHH----HHHHHHHHHhhhhhhcccchHHHHHHhhHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSL----LAGATVGSFTGGSLADKFGRTRTFQLDAVP 180 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 180 (397)
+.....+..+..++.........+.....++.+..... +...... .+...+..++.|.++||+|||..+.+..+.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~-~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLEN-GLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchh-hhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 34444444555555454545556666666655433221 3333333 566788899999999999999999999988
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHH--hhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 015968 181 LAAGAFLCATAQSVQTMIIGRVLAGI--GIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL 258 (397)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~r~l~G~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 258 (397)
..+..+...+.. +|.++ +.|+ +.+.......++++|....++|...+|+.......+..++|.+++.+... .
T Consensus 102 ~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~-~ 175 (463)
T KOG2816|consen 102 TILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF-L 175 (463)
T ss_pred HHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-c
Confidence 888877776655 44333 3333 23456677889999999999999999999999999999999999988776 7
Q ss_pred chHHHHHHhHHHHHHHHH-HhccCCCChH
Q 015968 259 WWRTMFGLAAIPSILLAL-GMGLSPESPR 286 (397)
Q Consensus 259 ~w~~~~~~~~~~~~~~~~-~~~~~~e~~~ 286 (397)
|.-..|++..+..++..+ ..+++||+-.
T Consensus 176 ~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 176 GIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred CchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 888888888877766655 4556788743
No 213
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.78 E-value=1.5e-06 Score=86.68 Aligned_cols=154 Identities=19% Similarity=0.198 Sum_probs=119.8
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-cchHHHHHHhhHHHHHHHHHHHhhch--------H
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQS--------V 194 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~ 194 (397)
..+..++.+.+|.+.+.. ..+...+....-+.++++|+++|+ +|+++.++++.++..++.++.++... .
T Consensus 8 aiLvlYl~~~lg~~~~~A--~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~ 85 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTS--TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHD 85 (654)
T ss_pred HHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHH
Confidence 335667777889988777 667777777778889999999995 79999999999999999887776421 2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhcccCccc---chhhhhHHHHHHHHHHHHHHHHhhhcCCC------CcchHHHHH
Q 015968 195 QTMIIGRVLAGIGIGISSAIVPLYISEISPTEI---RGALGSVNQLFICVGILAALVAGLPLAGN------PLWWRTMFG 265 (397)
Q Consensus 195 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~w~~~~~ 265 (397)
...+++-.+.++|.|++-+...+...|.+++++ |-..+.+++.+.++|+++++.+...+.+. ..+|.+.|.
T Consensus 86 ~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~ 165 (654)
T TIGR00926 86 LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFG 165 (654)
T ss_pred HHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Confidence 335566677888889999999999999997643 46778888899999999998888776532 136999998
Q ss_pred HhHHHHHHHHHHhc
Q 015968 266 LAAIPSILLALGMG 279 (397)
Q Consensus 266 ~~~~~~~~~~~~~~ 279 (397)
+.+++.++.+++..
T Consensus 166 i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 166 VPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887766665543
No 214
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.77 E-value=3e-07 Score=87.64 Aligned_cols=128 Identities=9% Similarity=-0.111 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 223 (397)
+...+.+..+..+|.++++++.||+++|+++.+..++.++..++..+.++... +++-++.|++.+..+|.......+..
T Consensus 272 ~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~ 350 (410)
T TIGR00885 272 ANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGL 350 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45566666788999999999999999999999999998888888888776544 56667888999999999999999999
Q ss_pred CcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCC-----cchHHHHHHhHHHHHHH
Q 015968 224 PTEIRGALGSVNQLFICVGILAALVAGLPLAGNP-----LWWRTMFGLAAIPSILL 274 (397)
Q Consensus 224 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~~w~~~~~~~~~~~~~~ 274 (397)
+++.+..+.++ .++ .+|+.+.|.+.|.+.+.. .+.++.|++..++.+..
T Consensus 351 g~~~~~~s~~l-~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 351 GQDTKYGAAGL-VMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred hhhhhhhHHHH-HHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 86643333333 333 389999999999988742 25777777655444333
No 215
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=1.2e-08 Score=94.06 Aligned_cols=181 Identities=15% Similarity=0.023 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHH------HHH-HHHHHHHHHHHHHhhhhhhcccchHHHHHHhh
Q 015968 106 VGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQ------GWI-VSSLLAGATVGSFTGGSLADKFGRTRTFQLDA 178 (397)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 178 (397)
++..+..+++.-......+.....+.+..|+...+... ... .-+...++..|-.+...++|++|||++.+.+.
T Consensus 306 Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF 385 (538)
T KOG0252|consen 306 LLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGF 385 (538)
T ss_pred HHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhH
Confidence 33444455544443444444666777777765443310 111 11122233446666778899999999999999
Q ss_pred HHHHHHHHHHHhhch----HHHHHHHHHHHHH-hhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 179 VPLAAGAFLCATAQS----VQTMIIGRVLAGI-GIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 179 ~~~~~~~~~~~~~~~----~~~~~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
+++++..+..+...| -..++++..+..+ +.-+.......+.+|.||.+.|++.-|+..+..-+|.++|...-..+
T Consensus 386 ~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~ 465 (538)
T KOG0252|consen 386 FIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYL 465 (538)
T ss_pred HHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHh
Confidence 999999988887654 2334444433333 22233444566789999999999999999999999999998888887
Q ss_pred CCC----CcchHHHHHHhHHHHHHHHHHhccCCCChH
Q 015968 254 AGN----PLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (397)
Q Consensus 254 ~~~----~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 286 (397)
.++ ..+.++++++.+.+.++..+..+++||+.+
T Consensus 466 t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 466 TDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 762 267899999999999999999899998854
No 216
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.77 E-value=3.3e-07 Score=89.64 Aligned_cols=134 Identities=15% Similarity=0.082 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHHhh----hhhhcccchHHHHHHhhHHHHHHHHHHHhhch---------HHHHHHHHHHHHHhhhh
Q 015968 144 GWIVSSLLAGATVGSFTG----GSLADKFGRTRTFQLDAVPLAAGAFLCATAQS---------VQTMIIGRVLAGIGIGI 210 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~----g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~~~ 210 (397)
+++.++..+...+..++. +++.+|++..+.+.++.++.+++.+..++..+ .+++++.+++.|+|+..
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 566666665555555555 67777777778899999999999888766644 46788899999999999
Q ss_pred hhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC-----C----CCcchHHHHHHhHHHHHHHHHH
Q 015968 211 SSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA-----G----NPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----~----~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
..|...+++.+..|++.||+.+|.+.....+|..++..+..... . ...++.+.|...++.+++..++
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888777766654211 1 1124678887777766544433
No 217
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.76 E-value=2e-07 Score=89.17 Aligned_cols=153 Identities=21% Similarity=0.193 Sum_probs=114.8
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhccc---c--hHHHHHHhhHHHHHHHHHHHhh----chHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKF---G--RTRTFQLDAVPLAAGAFLCATA----QSVQT 196 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~---G--rr~~l~~~~~~~~~~~~~~~~~----~~~~~ 196 (397)
..+++.+++|++.++. ..+.+...+... ..+++|.++|.+ | ||+.++++.++..++.+..+.. .+...
T Consensus 12 ~~~~l~~~l~ls~~~~--~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQL--QRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 6688999999999887 666777666544 478899999976 3 5566666777776655555543 24566
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcccCc--ccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH
Q 015968 197 MIIGRVLAGIGIGISSAIVPLYISEISPT--EIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 197 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 274 (397)
..++-++..+|.+....++-+.+.|...+ +.||...+.......+|.+++..++|.+.+. .++++.|.+.+++.++.
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-FGPQGVFLISAALPLLM 167 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-CCCeEEehHHHHHHHHH
Confidence 66677888888889999999999998743 3367777888888899999999999998877 78899998887777666
Q ss_pred HHHhccCC
Q 015968 275 ALGMGLSP 282 (397)
Q Consensus 275 ~~~~~~~~ 282 (397)
.+..+++.
T Consensus 168 ~~~~~~~~ 175 (433)
T PF03092_consen 168 LIVALFLL 175 (433)
T ss_pred HHHHHHhh
Confidence 55544443
No 218
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.74 E-value=3.1e-08 Score=92.97 Aligned_cols=162 Identities=19% Similarity=0.155 Sum_probs=132.1
Q ss_pred HHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHH
Q 015968 116 FGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQ 195 (397)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 195 (397)
.+...+.+...+-.-.+|.+-...-. |........+-++.-++.+++.+|+|+-+++..++.+.++=.+..++..|.|
T Consensus 383 mG~g~~lv~tFLfWHled~~~~~~Lf--Gv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W 460 (618)
T KOG3762|consen 383 MGAGVGLVFTFLFWHLEDLGGIKTLF--GVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPW 460 (618)
T ss_pred HHHHHHHHHHHHHHHHhhcCCcceee--eehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCch
Confidence 33333333334444457777555444 7767777777788888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHH-HHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 274 (397)
+.+..-+++|+..+.++..+.+|++...|++.|..+.++.... .++|--+|.++||.+... .|-|..|++.++.+++.
T Consensus 461 ~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~-fg~~ttf~~~giAcl~~ 539 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER-FGARTTFRIFGIACLVT 539 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee-ehhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987655 588888999999998877 78888888888877666
Q ss_pred HHHhcc
Q 015968 275 ALGMGL 280 (397)
Q Consensus 275 ~~~~~~ 280 (397)
++....
T Consensus 540 l~~~~~ 545 (618)
T KOG3762|consen 540 LALFIS 545 (618)
T ss_pred HHHHHH
Confidence 554433
No 219
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.71 E-value=3.3e-06 Score=77.67 Aligned_cols=229 Identities=14% Similarity=0.117 Sum_probs=135.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHH-HHHHhhHHHHHHHHHHHhhch--H-HHHHHHHHHHHHhhhhhhhh
Q 015968 139 NTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTR-TFQLDAVPLAAGAFLCATAQS--V-QTMIIGRVLAGIGIGISSAI 214 (397)
Q Consensus 139 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~-~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~r~l~G~~~~~~~~~ 214 (397)
.+..++...++..+..++..|+.|.++|+.|+|| .+-...++..++.++..+.++ + +..++...+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 3445588888888889999999999999999655 445555555666666666544 4 44555557778888888888
Q ss_pred hhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHh--hhcCC---------------CCcchHHHHHHhHHHHHHHHHH
Q 015968 215 VPLYISEISPTEIRGALGSVNQLFICVGILAALVAG--LPLAG---------------NPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 215 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~---------------~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
..+++.+..++++-++..++-.....+|+.+.-++. ..+.. ....=|..+.+.++..++..+-
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 889999999987666666655555555555443332 11111 1244678888888777666654
Q ss_pred h-ccCCCChHHHHHcCCHHHHHHHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhh
Q 015968 278 M-GLSPESPRWLFQQGKKSEAEKSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLA 356 (397)
Q Consensus 278 ~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (397)
+ +..++.++-. .+. ........++ -+.++++..+++.....+++..++ .-
T Consensus 216 m~~~v~~~~~~~-~~~-~~~l~~g~k~-----------------------L~~t~k~i~~~~~i~~FLiA~~~~----~D 266 (438)
T COG2270 216 MILNVHDAEKIS-SPP-PTALRNGFKE-----------------------LKSTFKEIRGRKNLVLFLIARFFY----ID 266 (438)
T ss_pred HHhccccccccc-ccc-hHHHHHHHHH-----------------------HHHHHHHHhcccchHHHHHHHHHH----Hh
Confidence 4 4455544310 000 0011111111 123455565555444444433332 23
Q ss_pred hhHHHHHhHHHHHH-HcCCChh--HHHHHHHHHHHHHhhhhcc
Q 015968 357 GINAVVYYSTSVFR-SVGIESD--VAASALVGAANVFGNYSIS 396 (397)
Q Consensus 357 ~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~g~~~~~ 396 (397)
|.+.+..+...+-. ++|.+.. ........+..++|+++++
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g 309 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAG 309 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667767666665 6788865 4445556666677766653
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.71 E-value=2.2e-06 Score=81.36 Aligned_cols=126 Identities=16% Similarity=0.129 Sum_probs=93.5
Q ss_pred HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhH-HHHHHHHHHHh--hchHHHHHHHHHHH
Q 015968 128 EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAV-PLAAGAFLCAT--AQSVQTMIIGRVLA 204 (397)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~-~~~~~~~~~~~--~~~~~~~~~~r~l~ 204 (397)
..+.+.+|.+..+. +++.....++..++.++.+++.||+|++........ +..+....... ..+.+.+++..++.
T Consensus 232 ~~~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (394)
T PRK11652 232 VLMGAVLGLSSMTV--SILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALF 309 (394)
T ss_pred HHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 35555589888777 888888888888999999999999984433322222 22222222222 23566677788899
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN 256 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 256 (397)
|++.+...+....+..|.+| ++++...++.+....+|..+++.+++.+...
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 310 FFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999887 4689999999999999999999998887654
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.9e-07 Score=89.47 Aligned_cols=153 Identities=15% Similarity=0.073 Sum_probs=104.0
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccch---------HHHHHHhhHHHHHHHHHHHhhch--
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR---------TRTFQLDAVPLAAGAFLCATAQS-- 193 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr---------r~~l~~~~~~~~~~~~~~~~~~~-- 193 (397)
..+.++.+-+|.+-.+. |++.++..+...+..+++|.++||.-+ |..-.++....+++.+..++.+.
T Consensus 280 y~PtY~~~VL~f~v~~~--G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~ 357 (466)
T KOG2532|consen 280 YLPTYLKEVLGFDVRET--GFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEH 357 (466)
T ss_pred HhhHHHHHHhCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCc
Confidence 34557777899998888 999999999999999999999998744 22334555555566666666542
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-hhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC--CcchHHHHHHhHHH
Q 015968 194 VQTMIIGRVLAGIGIGISSAIV-PLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN--PLWWRTMFGLAAIP 270 (397)
Q Consensus 194 ~~~~~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~~~w~~~~~~~~~~ 270 (397)
.+..+++ +..+++..+..... ..-..|.. +++-+..+|+.+....+..+++|.+.+.+... ...|+++|++.+++
T Consensus 358 ~~~a~~~-l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i 435 (466)
T KOG2532|consen 358 RLLAVIL-LTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGI 435 (466)
T ss_pred chHHHHH-HHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHH
Confidence 2111111 11222222222222 22222334 45679999999999999999999999998842 24799999999888
Q ss_pred HHHHHHHhccC
Q 015968 271 SILLALGMGLS 281 (397)
Q Consensus 271 ~~~~~~~~~~~ 281 (397)
.++..+.+.++
T Consensus 436 ~~~~~i~f~~f 446 (466)
T KOG2532|consen 436 LIVGNIIFLFF 446 (466)
T ss_pred HHHhchheeEe
Confidence 87776655544
No 222
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.66 E-value=1.7e-07 Score=87.76 Aligned_cols=114 Identities=19% Similarity=0.229 Sum_probs=85.3
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh--hc--hHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT--AQ--SVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~--~~--~~~~~~~~r 201 (397)
...++.+.+|.+..+. +++.+.+.++..++.+++|+++||+|+|+.+..+....+++..+..+ .. +.+.+++..
T Consensus 248 ~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (366)
T TIGR00886 248 FAMFFKDQFGLSKVTA--GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLF 325 (366)
T ss_pred HHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHH
Confidence 4456667789988777 88888999999999999999999999998887777666665554443 22 555555555
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVG 242 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 242 (397)
++.+++.|...+....++.+.+| +++|.+.|+.+....+|
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 326 VALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 55666666666667777888887 57899999888776554
No 223
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.2e-06 Score=82.70 Aligned_cols=130 Identities=20% Similarity=0.283 Sum_probs=97.6
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc--hHHHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGR 201 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r 201 (397)
+....++. ++.++..+....+.......+..++.+++.++++|+|+|+++.++.++.+++.++..+.+ +.+.+++..
T Consensus 256 ~s~~~yy~-~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~ 334 (467)
T COG2211 256 GSIMVYYV-TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVAL 334 (467)
T ss_pred hhhhheeE-EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHH
Confidence 33444432 234444444336677777777778899999999999999999999999999998887765 788888888
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcc-----cc--hhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTE-----IR--GALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~-----~r--~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
++.+++.+...+...++++|..+-. .| |...+....+.=+|..++..+.+++.
T Consensus 335 ~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 335 IIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred HHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776432 22 67777777777777777766555543
No 224
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.62 E-value=1.8e-10 Score=111.37 Aligned_cols=158 Identities=17% Similarity=0.057 Sum_probs=101.4
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH--h--h-ch----H
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA--T--A-QS----V 194 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~--~--~-~~----~ 194 (397)
....+.+.++.+.+.. . +......+...++.++...+.||+|||+.++.+.++.+++.+..+ . . ++ -
T Consensus 273 ~~~~~~i~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 273 FYYSPSIFENAGISNS-F---LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred cccccccccccccccc-c---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3355777777777765 2 112233344556667777999999999999999998888877664 1 1 11 1
Q ss_pred HHHHHHHHHHHHhhh-hhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHH-HH
Q 015968 195 QTMIIGRVLAGIGIG-ISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIP-SI 272 (397)
Q Consensus 195 ~~~~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~-~~ 272 (397)
...+++-.+..++.+ +..+....+.+|.||.+.|+++.++......++.++++.+...+.+. .+-...+++.+++ .+
T Consensus 349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-LGGWGVFLIFAGVCLI 427 (451)
T ss_pred cccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccchhhHHHHHH
Confidence 111222222222222 33455567889999999999999999998888888888887776655 3312333344444 44
Q ss_pred HHHHHhccCCCChH
Q 015968 273 LLALGMGLSPESPR 286 (397)
Q Consensus 273 ~~~~~~~~~~e~~~ 286 (397)
..++..+++||+..
T Consensus 428 ~~i~~~~~lpET~g 441 (451)
T PF00083_consen 428 AIIFVYFFLPETKG 441 (451)
T ss_pred HHhheeEEEeeCCC
Confidence 44556677899954
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.58 E-value=2e-07 Score=90.39 Aligned_cols=149 Identities=10% Similarity=0.047 Sum_probs=115.3
Q ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh----------chHHHHHHHH
Q 015968 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA----------QSVQTMIIGR 201 (397)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r 201 (397)
+.+|.+.... |++.....++.+++..+.+++.+|++.|+++.++.++.+++.+..... ++.+.++..-
T Consensus 281 ~~lG~s~~~~--G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPGGPSFS--GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCCCcchh--hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 5688888888 999999999999999999999999999999999999999887554311 3333445556
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcc-----h--HHHHHHh-HHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLW-----W--RTMFGLA-AIPSIL 273 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-----w--~~~~~~~-~~~~~~ 273 (397)
++.+++.+..+.....++.+..|++.+++..++..+..++|..+++.+++.+.+. .| + .|..++. .+..++
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~-~g~~~~~~~~~~~~i~i~~~~~l~ 437 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET-IGITCDNSNNLWLLILGHSLAPLL 437 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcccccchHHHHHHHHHHHHH
Confidence 7888888888888999999999999999999999999999999999988887654 22 2 3333222 333344
Q ss_pred HHHHhccCCC
Q 015968 274 LALGMGLSPE 283 (397)
Q Consensus 274 ~~~~~~~~~e 283 (397)
.+.+.+++|+
T Consensus 438 ~l~~~~llP~ 447 (468)
T TIGR00788 438 PLPLLHLLPR 447 (468)
T ss_pred HHHHHHhCCC
Confidence 4444456785
No 226
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.56 E-value=5.8e-07 Score=63.72 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=71.8
Q ss_pred HHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHH
Q 015968 117 GYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQT 196 (397)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 196 (397)
++....+++.+|.+++|.+++.++. +|+.+..++||.+|.+...++.++..+++.+..+.++..+..+.+++.++.+.
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~a--g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQA--GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 4445667889999999999999999 99999999999999999999999989999999999999999999999888765
Q ss_pred H
Q 015968 197 M 197 (397)
Q Consensus 197 ~ 197 (397)
+
T Consensus 83 w 83 (85)
T PF06779_consen 83 W 83 (85)
T ss_pred H
Confidence 4
No 227
>PRK11462 putative transporter; Provisional
Probab=98.54 E-value=7.3e-06 Score=79.39 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc--hHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ--SVQTMIIGRVLAGIGIGISSAIVPLYISE 221 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 221 (397)
+++...+.++.+++.+++++++||+|+|+++..+.++.++..++..+.+ +...+++.-++.|++.+...+...++++|
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad 345 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSD 345 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888899999999999999999988765554444333333322 23344445566787777766666667776
Q ss_pred ccCc-----ccc--hhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 222 ISPT-----EIR--GALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 222 ~~~~-----~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
..+- .+| |...+......-+|..+++.+++.+.
T Consensus 346 ~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 346 TVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred hHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6552 123 55556666667777777666655543
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.53 E-value=3.6e-06 Score=82.03 Aligned_cols=135 Identities=16% Similarity=0.080 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHH-------HHHhhHHHHHHHHHHH-----hh-----chHHHHHHHHHHHHH
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRT-------FQLDAVPLAAGAFLCA-----TA-----QSVQTMIIGRVLAGI 206 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~-------l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~r~l~G~ 206 (397)
+++.++..+...+..++.+++.||+|+|+. +.+|.++.+++.+..+ +. .+++.++...++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 466666667777888899999999999873 6777777776654321 21 357778888899999
Q ss_pred hhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC---------CcchHHHHHHhHHHHHHHHHH
Q 015968 207 GIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN---------PLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------~~~w~~~~~~~~~~~~~~~~~ 277 (397)
|++...+....++.+..|++.++.+++++.....+|..+|..++...... ...+.+.|...++..++..++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988887544210 013567777777666555444
Q ss_pred h
Q 015968 278 M 278 (397)
Q Consensus 278 ~ 278 (397)
+
T Consensus 472 ~ 472 (489)
T PRK10207 472 M 472 (489)
T ss_pred H
Confidence 4
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.53 E-value=2.7e-07 Score=83.72 Aligned_cols=146 Identities=14% Similarity=0.128 Sum_probs=113.1
Q ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccc--hHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 015968 129 YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG--RTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGI 206 (397)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 206 (397)
.+.+.+..+.-+. |+..--..+.+.++..+.|.++||++ |-.....+++..++++....+++++.++++-++..|+
T Consensus 296 wm~e~m~~p~w~~--G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~ 373 (464)
T KOG3764|consen 296 WMLETMFTPGWEV--GLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGF 373 (464)
T ss_pred HHHHhccCCCcce--eeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHH
Confidence 3667777444355 55555566789999999999999999 5334455566666667777889999999999999999
Q ss_pred hhhhhhhhhhhhhhcccCccc------chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 207 GIGISSAIVPLYISEISPTEI------RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
+.+...+.....+.+....++ -|...++...++.+|..+||.+++.+.+. .|++|...+.++..++..-+
T Consensus 374 ~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~-iGF~wl~~iig~~n~iyapv 449 (464)
T KOG3764|consen 374 GIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA-IGFEWLMTIIGILNLIYAPV 449 (464)
T ss_pred HHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee-hhHHHHHHHHHHHHHHHHHH
Confidence 888887777666666655433 36778888999999999999999999887 89999988888877665543
No 230
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.53 E-value=1.9e-06 Score=84.33 Aligned_cols=145 Identities=18% Similarity=0.160 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchH-HHHHHhhHHHHHHHHHHHhh--chHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRT-RTFQLDAVPLAAGAFLCATA--QSVQTMIIGRVLAGIGIGISSAIVPLYIS 220 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr-~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 220 (397)
+++...+.++..++.++.|.+..+++|- ..++++.+++.+++-+++.. +|....++.-++.|++.|...........
T Consensus 352 ~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~q 431 (599)
T PF06609_consen 352 GWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQ 431 (599)
T ss_pred ehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeE
Confidence 7888888888999999999999988874 44467766666655444443 45556667778999999888887777777
Q ss_pred cccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC---------------------------------------------
Q 015968 221 EISPTEIRGALGSVNQLFICVGILAALVAGLPLAG--------------------------------------------- 255 (397)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------------------------------------------- 255 (397)
-..|++.-+.+.++..+.-.+|+.+|.-+...+..
T Consensus 432 l~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPG 511 (599)
T PF06609_consen 432 LIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPG 511 (599)
T ss_pred eeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCC
Confidence 77888888999999988888887776655433221
Q ss_pred ----------------CCcchHHHHHHhHHHHHHHHHHhccCCCChHHH
Q 015968 256 ----------------NPLWWRTMFGLAAIPSILLALGMGLSPESPRWL 288 (397)
Q Consensus 256 ----------------~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 288 (397)
...++|++|+....++++.++..+++++..++.
T Consensus 512 it~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~~m 560 (599)
T PF06609_consen 512 ITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDKYM 560 (599)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhh
Confidence 002488999988888888888888888776543
No 231
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.48 E-value=5.7e-06 Score=81.41 Aligned_cols=163 Identities=15% Similarity=0.060 Sum_probs=100.4
Q ss_pred HhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchH-----
Q 015968 120 LGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSV----- 194 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~----- 194 (397)
.+......+.+.+..|.+.+.. +...+..+...++..+...+.||+|||+.++.+.+.+.++.++.+.....
T Consensus 311 ~~~~~~Y~~~if~~~g~~~~~~---~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~ 387 (513)
T KOG0254|consen 311 INYVFYYSTTIFKSAGLKSDTF---LASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYP 387 (513)
T ss_pred CceEEeehHHHHHhcCCCCchH---HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCC
Confidence 3455557778888888875532 33444455566777777999999999999999999999999887754211
Q ss_pred --------HHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHH
Q 015968 195 --------QTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGL 266 (397)
Q Consensus 195 --------~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~ 266 (397)
..+...-+.......+..++...+.+|.+|.+.|+++.++......+...+-.......... .++...|..
T Consensus 388 ~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~-~~~~~~f~~ 466 (513)
T KOG0254|consen 388 NSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA-LGIGGTFGY 466 (513)
T ss_pred CcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchHHH
Confidence 11111112222222333444556889999999999998887776665544433332222222 223445555
Q ss_pred hHHHH-HHHH-HHhccCCCChH
Q 015968 267 AAIPS-ILLA-LGMGLSPESPR 286 (397)
Q Consensus 267 ~~~~~-~~~~-~~~~~~~e~~~ 286 (397)
.+..+ +... ...+++||+..
T Consensus 467 f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 467 FGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred HHHHHHHHHHHHheEEcccCCC
Confidence 44444 3333 45667899853
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.45 E-value=1.2e-05 Score=74.16 Aligned_cols=151 Identities=17% Similarity=0.153 Sum_probs=121.5
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc-ccchHHHHHHhhHHHHHHHHHHH---hhchHHHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD-KFGRTRTFQLDAVPLAAGAFLCA---TAQSVQTMIIGR 201 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-~~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~r 201 (397)
+-|+=.+-||++..+. .-+......|..++..+.|++.. |.++++.-.+++.+.+++..+.. ...+.+.+...-
T Consensus 231 LEPygg~Vfgmsv~eT--T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~ 308 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGET--TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGV 308 (403)
T ss_pred cCCchhHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 3466677799999888 78899999999999988888766 78888888888877777765544 446788899999
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC---------CCcchHHHHHHhHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG---------NPLWWRTMFGLAAIPSI 272 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~~~w~~~~~~~~~~~~ 272 (397)
++.|++.|.+.....+.+.++..+++.|..+|.+.....++.-++.++++.+.+ ...+|..+|.+.++..+
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~ 388 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLL 388 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 999999999988888999999988888999999999998888888888876543 22467888888777766
Q ss_pred HHHHHh
Q 015968 273 LLALGM 278 (397)
Q Consensus 273 ~~~~~~ 278 (397)
+.+++.
T Consensus 389 ~a~~ll 394 (403)
T PF03209_consen 389 AALVLL 394 (403)
T ss_pred HHHHHH
Confidence 665544
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.43 E-value=5.8e-06 Score=75.62 Aligned_cols=146 Identities=16% Similarity=0.125 Sum_probs=112.5
Q ss_pred HhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHH
Q 015968 120 LGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMII 199 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (397)
..+.+....++.+..|++..+. ....+.+..+.++|.+++.++..|+-..+++....++..+.++..++.++...+.
T Consensus 253 va~gsfl~~y~~~~~g~~~~~a--a~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~- 329 (422)
T COG0738 253 VAIGSFLVSYLEELLGLNEQQA--AYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY- 329 (422)
T ss_pred HHHHHHHHHHHHhcCCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-
Confidence 3343444455555588888888 8999999999999999999999999999999999999999999999998865544
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
+-++.|++.+..+|...+...+..+. + ....+..-....+|+++-|.+.|++.+. .|-...+.+..+++
T Consensus 330 ~l~~ig~F~simfPTIfslal~~l~~-~-ts~~s~~l~maivGGAiiP~l~G~i~d~-~g~~~~~~~~pllc 398 (422)
T COG0738 330 ALFLIGLFNSIMFPTIFSLALKNLGE-H-TSVGSGLLVMAIVGGAIIPPLQGVIADM-FGIQLTFLIVPLLC 398 (422)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccCc-c-ccccceeeeeheecchHHHHHHHHHHHh-hhhHHHHHHHHHHH
Confidence 45788999999999999999999983 3 3444445555677888888888888877 66666655333333
No 234
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.42 E-value=9e-06 Score=65.60 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccC
Q 015968 145 WIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISP 224 (397)
Q Consensus 145 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 224 (397)
...++......+..++.+.+.+++|.|+.++++.+...+..... +-++.+.++.+-++.|++.+..+.....++.+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 34556666678888889999999999999999999998666554 45678888999999999999999999999999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 225 TEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
++.|++..+++......+.++|.++...+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888887766544
No 235
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.42 E-value=0.00019 Score=68.86 Aligned_cols=127 Identities=10% Similarity=0.025 Sum_probs=93.6
Q ss_pred hHHHHHHHhCCCc-----hhhHHHHHHHHHHHHHHHH-HHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh--c-----
Q 015968 126 ALEYLAKDLGIAE-----NTVLQGWIVSSLLAGATVG-SFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA--Q----- 192 (397)
Q Consensus 126 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~-~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~----- 192 (397)
.+-.+.+.+.++. +.. .++-+...+...+. .++.+++++|++|++++-+....+.+..+++++. +
T Consensus 25 iLR~lKD~lvv~~~~~gae~i--~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~ 102 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEII--PFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLL 102 (472)
T ss_pred HHHhhhhheeecccCCchhhH--HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhc
Confidence 4556677776632 233 78877776766666 8899999999999999988777777766665543 1
Q ss_pred ------------------------hHHHHHHHHHHHHHhhhhhhh-hhhhhhhcccCcccchhhhhHHHHHHHHHHHHHH
Q 015968 193 ------------------------SVQTMIIGRVLAGIGIGISSA-IVPLYISEISPTEIRGALGSVNQLFICVGILAAL 247 (397)
Q Consensus 193 ------------------------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 247 (397)
+.|...+..+...+......+ ....++.|.+..++-.+..+++..+.++|.++++
T Consensus 103 ~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg 182 (472)
T TIGR00769 103 HPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSG 182 (472)
T ss_pred CCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123334444555555555565 6789999999999888999999999999999999
Q ss_pred HHhhhcC
Q 015968 248 VAGLPLA 254 (397)
Q Consensus 248 ~~~~~l~ 254 (397)
.+...+.
T Consensus 183 ~~~~~~~ 189 (472)
T TIGR00769 183 RTIKYFS 189 (472)
T ss_pred HHHHHHH
Confidence 8877765
No 236
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.28 E-value=8e-05 Score=71.20 Aligned_cols=141 Identities=16% Similarity=0.119 Sum_probs=85.4
Q ss_pred hHH-HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH-----hhchHHHHHH
Q 015968 126 ALE-YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA-----TAQSVQTMII 199 (397)
Q Consensus 126 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~ 199 (397)
..| .+++.+|.+..+. ++.......+..++..+.+.+.++.++++.+.....+..++.++.. ..++++..++
T Consensus 240 ~~P~~l~~~~g~s~~~~--gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~ 317 (413)
T PRK15403 240 VSPVILIDAGGMTTSQF--AWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVL 317 (413)
T ss_pred hChHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHH
Confidence 334 5556679988887 8887777778888888888766444443333222222222222221 1234444566
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
..++.++|.+...+......- .-....+|++.++.+.....+..+++.+++++.+. +-.+.|...+++.
T Consensus 318 ~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~ 386 (413)
T PRK15403 318 GTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--GGRLPFHLLAVVA 386 (413)
T ss_pred HHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHH
Confidence 778888888888777664322 11222468888888888877888888888877554 3344444444333
No 237
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.26 E-value=8.8e-06 Score=78.47 Aligned_cols=156 Identities=14% Similarity=0.008 Sum_probs=94.8
Q ss_pred HHHHHHHhHhhchhhHHHHHHH-hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc----cchHHHHHHhhHHHHHHH-
Q 015968 112 GAILFGYHLGVVNGALEYLAKD-LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK----FGRTRTFQLDAVPLAAGA- 185 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grr~~l~~~~~~~~~~~- 185 (397)
..+........+....|.+.++ .|.+..+. +.+...+.++.+++.++.|+++|| ..+|..+.....+..+..
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a--~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~ 358 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSNGGYSELQA--NLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGA 358 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcCCCcChHHh--ccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3333334344455567776666 56777777 899999999999999999999999 677777766666665544
Q ss_pred HHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccc-hhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHH
Q 015968 186 FLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIR-GALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMF 264 (397)
Q Consensus 186 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~ 264 (397)
+......+.......-+....+.....+......++....+.| -...+....+.+.++++++.+-........+|.+.|
T Consensus 359 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 359 ISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred HHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHH
Confidence 4333333333333333333444555566666777777766555 344555555555555554444333222225788887
Q ss_pred HHhHH
Q 015968 265 GLAAI 269 (397)
Q Consensus 265 ~~~~~ 269 (397)
+....
T Consensus 439 ~~~~~ 443 (495)
T KOG2533|consen 439 YMLVA 443 (495)
T ss_pred HHHHH
Confidence 54433
No 238
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.16 E-value=8.2e-05 Score=71.67 Aligned_cols=141 Identities=16% Similarity=0.046 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccc-hHHHHHHhhHHHHHHHHHHHhhch---------------------HHHHHHHHH
Q 015968 145 WIVSSLLAGATVGSFTGGSLADKFG-RTRTFQLDAVPLAAGAFLCATAQS---------------------VQTMIIGRV 202 (397)
Q Consensus 145 ~~~~~~~~~~~i~~~~~g~l~d~~G-rr~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~r~ 202 (397)
|....+.+...+.+++..++.+++| ||++..++.++.+++.+...+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 4445555555677778888999999 477779998888888877765432 366777888
Q ss_pred HHHHhhhhhhhhhhhhhhcccCcc--cchhhhhHHHHHHHHHHHHHHHHhhhcCCC-CcchHHHHHHhHHHHHHHHHHhc
Q 015968 203 LAGIGIGISSAIVPLYISEISPTE--IRGALGSVNQLFICVGILAALVAGLPLAGN-PLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
+.|+..+..+.+-.+++++..+.+ ..|..+|+++.+..+..++..+..|.+... ..+-.+.+.+.++..++..++.+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 999999999999899999999854 349999999999999988888766664322 12345677777888777666544
Q ss_pred -cCCCCh
Q 015968 280 -LSPESP 285 (397)
Q Consensus 280 -~~~e~~ 285 (397)
.+|+++
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 456654
No 239
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=8.3e-05 Score=73.40 Aligned_cols=154 Identities=20% Similarity=0.124 Sum_probs=106.3
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHH---HHHHHHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQ---TMIIGRV 202 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~r~ 202 (397)
........+|.+.. +...........+....+.+.|++|||.....+.++..+++++.++..... ...+...
T Consensus 340 gl~~~~~~lg~~~~-----~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (521)
T KOG0255|consen 340 GLSLNVSGLGGNIY-----LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPL 414 (521)
T ss_pred hhhhhhhhcCchHH-----HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Confidence 33444455554432 333333334555556668999999999999999999999999988875433 3555556
Q ss_pred HHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH-HHHHHHhccC
Q 015968 203 LAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS-ILLALGMGLS 281 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~-~~~~~~~~~~ 281 (397)
+..++.+..+.....+.+|.+|...|..+.+.......+|.+++|.+..........+.... .+... +..++..+++
T Consensus 415 ~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~l 492 (521)
T KOG0255|consen 415 LGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL--FGWLALLLGLLSLLLL 492 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH--HHHHHHHHHHHHHhcC
Confidence 66666667777778999999999999999999999999999999998765433222233222 34344 3344445778
Q ss_pred CCChH
Q 015968 282 PESPR 286 (397)
Q Consensus 282 ~e~~~ 286 (397)
||+..
T Consensus 493 pet~~ 497 (521)
T KOG0255|consen 493 PETKG 497 (521)
T ss_pred cccCC
Confidence 99854
No 240
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.12 E-value=1.6e-05 Score=73.81 Aligned_cols=125 Identities=20% Similarity=0.253 Sum_probs=90.9
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc----ccchHHHHHHh-hHHHHHHHHHHHhhchH------
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGRTRTFQLD-AVPLAAGAFLCATAQSV------ 194 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grr~~l~~~-~~~~~~~~~~~~~~~~~------ 194 (397)
+.+.+..++|++..-. +.+-.+--+...+.+|+.|..+| ||||||.++.. .+...++.++..++..+
T Consensus 54 y~tPyl~~lGvphk~~--S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWS--SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred cccHHHHHcCCCcccc--cccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 4455557799988666 55555555667788999999999 58987776555 45555666666665332
Q ss_pred -----------HHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchh-hhhHHHHHHHHHHHHHHHHhhh
Q 015968 195 -----------QTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGA-LGSVNQLFICVGILAALVAGLP 252 (397)
Q Consensus 195 -----------~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~~~~~ 252 (397)
..+++..-+.=++.-..+..+-++++|....+++.+ +++++..+..+|+.+|..+++.
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 233444444455666778888999999998877776 9999999999999999888764
No 241
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.11 E-value=1.9e-05 Score=55.50 Aligned_cols=62 Identities=24% Similarity=0.309 Sum_probs=51.7
Q ss_pred HhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHH
Q 015968 118 YHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPL 181 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 181 (397)
...+.+.|..+...++.|++..+. |.+.++..+...++++++|.++||+|+++.++....++
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~i--Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQI--GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 335555667777778899999998 99999999999999999999999999988877665443
No 242
>PTZ00207 hypothetical protein; Provisional
Probab=98.09 E-value=4.3e-05 Score=75.28 Aligned_cols=153 Identities=11% Similarity=-0.009 Sum_probs=105.7
Q ss_pred hHHHHHHHh-CCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc---------cchHHHHHHhhHHHHHHHHHHHhhchHH
Q 015968 126 ALEYLAKDL-GIAENTVLQGWIVSSLLAGATVGSFTGGSLADK---------FGRTRTFQLDAVPLAAGAFLCATAQSVQ 195 (397)
Q Consensus 126 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~---------~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 195 (397)
-..+|.+.+ |.+.+......+++++.++..+|.+..|.++.. +.|--.+.+..+ +.++.++.++.-...
T Consensus 375 N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~ 453 (591)
T PTZ00207 375 NARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKA 453 (591)
T ss_pred cHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCcc
Confidence 456777777 663322100237888888999999999988722 222223333334 666666666554436
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHH-HHHhhhcCCC------------CcchHH
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAA-LVAGLPLAGN------------PLWWRT 262 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~l~~~------------~~~w~~ 262 (397)
.+++..++.|++.|..+++....++|+|. |+-|+-..+......+|+.+- ..+.|.+.+. ..=++.
T Consensus 454 ~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~ 532 (591)
T PTZ00207 454 ALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVM 532 (591)
T ss_pred HhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHh
Confidence 89999999999999999999999999999 778888888888888887664 4455554431 012788
Q ss_pred HHHHhHHHHHHHHHHhcc
Q 015968 263 MFGLAAIPSILLALGMGL 280 (397)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~ 280 (397)
.|++.+.++++..++...
T Consensus 533 ~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 533 PLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 898888888777665443
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.98 E-value=0.00048 Score=66.72 Aligned_cols=131 Identities=13% Similarity=0.067 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccch--H----H-HHHHhhHHHHHHHHHHHhh---------chHHHHHHHHHHHHHh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGR--T----R-TFQLDAVPLAAGAFLCATA---------QSVQTMIIGRVLAGIG 207 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Gr--r----~-~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~l~G~~ 207 (397)
+|..++..+.-++..|+.+++=.|.+| | + =+.+|+++.+++.+...++ .+.+++++..+++++|
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 677888777777777777777555532 2 1 1567777777777655431 2667788899999999
Q ss_pred hhhhhhhhhhhhhcccCcccchhhhhHHHHH-HHHHHHHHHHHhhhcCCC-----------CcchHHHHHHhHHHHHHH
Q 015968 208 IGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLPLAGN-----------PLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~-----------~~~w~~~~~~~~~~~~~~ 274 (397)
+-...|+..+.+++..|++.|+..+|.+... ..+|..++..++...... ...+...|...++..+++
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999774 467777777766655311 124566776666666444
No 244
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.89 E-value=0.00013 Score=66.39 Aligned_cols=122 Identities=10% Similarity=0.110 Sum_probs=104.1
Q ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccc--hHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhh
Q 015968 132 KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFG--RTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIG 209 (397)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 209 (397)
+.+|.+..+. |-+.+...+++.+.+....+..||.. -+-.+..++.++.-..++.+.+.....+.++-.+-.+..+
T Consensus 290 ~rfg~ss~~~--G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 290 GRFGYSSMQQ--GKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred CccCCChhhh--eeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 5688888777 88888888888888888888888887 6777777777777777777888888888888888888888
Q ss_pred hhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 210 ISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
...+....++....|..+||..+|+......++-++||+++|.+..
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 8888888899999999999999999999999999999999987754
No 245
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.89 E-value=0.0018 Score=61.64 Aligned_cols=106 Identities=14% Similarity=0.012 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcc
Q 015968 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTE 226 (397)
Q Consensus 147 ~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 226 (397)
.++.+..+.+..++.+.+.|++|.|..++++.....+..+..-+ .|-+.++++-.+.|+|.+..+..-..|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 66777788899999999999999999999999999988877766 44666788889999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 227 IRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
.+.+..++..+....+.++|.++-..+
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 888888888777777777776654443
No 246
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.81 E-value=0.00039 Score=64.86 Aligned_cols=131 Identities=15% Similarity=0.020 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccC
Q 015968 145 WIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISP 224 (397)
Q Consensus 145 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 224 (397)
.+.-+-.+-..+..+++.++.+|+.-+.-..+..++++++.++.+++++.+.-+++-.+.+++.|........+.+ .++
T Consensus 63 ~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~ 141 (402)
T PF02487_consen 63 AVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYG 141 (402)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcC
Confidence 3444455566677777888899888665566677788889999999999998888889999988888777777644 555
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhcc
Q 015968 225 TEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL 280 (397)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 280 (397)
+ ..++.+..+.+.++++|+..-..+......-|..+.+...+.++..+.+++
T Consensus 142 ~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~ 193 (402)
T PF02487_consen 142 K----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFF 193 (402)
T ss_pred c----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3 346777777777788887765555442244577777766666555544443
No 247
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.76 E-value=0.00028 Score=67.69 Aligned_cols=124 Identities=14% Similarity=0.071 Sum_probs=106.7
Q ss_pred HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhh-hhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 015968 128 EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGG-SLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGI 206 (397)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g-~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 206 (397)
-++...++.+..+. +.+.+.......+++++.. .+...+|-|+++..|++.-.+..++.+++++.|+++....+.++
T Consensus 266 ~yl~~~f~w~~~~~--s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~ 343 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEF--SDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVAL 343 (463)
T ss_pred EEEeeecCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHh
Confidence 45567789998888 8888888888888887776 77888999999999999999999999999999999988888777
Q ss_pred hhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 207 GIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
.. ...+...+.++-+..++++|+..++......+..+++|.+-+.+.
T Consensus 344 ~~-~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 344 AG-IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred hc-chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 64 667888899999999999999999999999998888888776654
No 248
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.66 E-value=0.014 Score=55.40 Aligned_cols=131 Identities=12% Similarity=0.007 Sum_probs=89.8
Q ss_pred hHHHHHHHhCCCchhh-HHHHHHHHHHH-HHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh---------ch-
Q 015968 126 ALEYLAKDLGIAENTV-LQGWIVSSLLA-GATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---------QS- 193 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---------~~- 193 (397)
.+-.+.+.+.++.... ...++-....+ +..+..++.+++++++-+.+++-.....+..+.+++++. ++
T Consensus 45 ~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~ 124 (509)
T COG3202 45 LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDP 124 (509)
T ss_pred HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCH
Confidence 3455666665552211 12566666666 667788889999999999999988777777777776652 11
Q ss_pred ----------------------HHHHHHHHHHHHHhhhhhhh-hhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHh
Q 015968 194 ----------------------VQTMIIGRVLAGIGIGISSA-IVPLYISEISPTEIRGALGSVNQLFICVGILAALVAG 250 (397)
Q Consensus 194 ----------------------~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 250 (397)
.|...+..++.-+-.+.+.. .-.....|.+..++-.+..+.++.+.+++..++..+.
T Consensus 125 ~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 125 EFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred HHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 13344444444443344444 4567788999988889999999999999998888888
Q ss_pred hhcCCC
Q 015968 251 LPLAGN 256 (397)
Q Consensus 251 ~~l~~~ 256 (397)
..+...
T Consensus 205 ~~~~k~ 210 (509)
T COG3202 205 SWLSKH 210 (509)
T ss_pred HHHhhc
Confidence 777653
No 249
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.62 E-value=0.012 Score=55.87 Aligned_cols=165 Identities=11% Similarity=-0.152 Sum_probs=81.6
Q ss_pred HHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH-
Q 015968 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA- 189 (397)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~- 189 (397)
...++...+.-...+..+.+..+..-+. -...+...-.-.+..++..+..|.+.||..|.++.-.+.++.-+...+.+
T Consensus 9 ~sh~ls~w~dR~w~Fa~~L~L~~i~p~s-Ll~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~ 87 (432)
T PF06963_consen 9 LSHFLSTWGDRMWEFAVPLFLISIFPGS-LLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCA 87 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHH
Confidence 3333433434444555665555553211 11112223333345567778888999999999987776655444332221
Q ss_pred -----hh--c----hHHHHHHHH---HHHHHhhhh-hhhhhhhhhhcccC------cccchhhhhHHHHHHHHHHHHHHH
Q 015968 190 -----TA--Q----SVQTMIIGR---VLAGIGIGI-SSAIVPLYISEISP------TEIRGALGSVNQLFICVGILAALV 248 (397)
Q Consensus 190 -----~~--~----~~~~~~~~r---~l~G~~~~~-~~~~~~~~~~~~~~------~~~r~~~~~~~~~~~~~g~~~~~~ 248 (397)
+. . +.+....+. .+.|...-. ......++=-||.. +..+....+..--.=.+.-+++|+
T Consensus 88 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl 167 (432)
T PF06963_consen 88 LFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPL 167 (432)
T ss_pred HHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1 112222222 222221111 11111122234422 122233344443334567889999
Q ss_pred HhhhcCCCCcchHHHHHHhHHHHHHHHHH
Q 015968 249 AGLPLAGNPLWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 249 ~~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 277 (397)
+.|.+... .+.+...++.++..++..+.
T Consensus 168 ~vG~l~t~-~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 168 FVGLLMTF-ASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHhhc-cCHHHHHHHHHHHHHHHHHH
Confidence 99998876 67887777777777665543
No 250
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.61 E-value=0.00014 Score=65.22 Aligned_cols=235 Identities=14% Similarity=0.088 Sum_probs=141.0
Q ss_pred hHHHHH-HHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 126 ALEYLA-KDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 126 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
..|++. .+.+++..+.. .-+.-.-.-.+.+.-.+.=.+.|-.--|++++.-.+...+.-++..+.++.+.+=+.-++.
T Consensus 27 ~tpyl~gp~~NlT~~~l~-~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~Fy 105 (433)
T KOG3810|consen 27 LTPYLLGPDKNLTEDQLT-NEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFY 105 (433)
T ss_pred cchhccCCCCCccHHHHh-cccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhc
Confidence 445544 34456554431 1222222333445555566789998899999888888888888888899999998889999
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC-CcchHHHHHHhHHHHHHHHHHhccCCC
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN-PLWWRTMFGLAAIPSILLALGMGLSPE 283 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~e 283 (397)
|...+. .....+|+-+..+++++.++.+..-+....|-..|..++-.+... ...+...=++......+..++.+++|.
T Consensus 106 G~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~ 184 (433)
T KOG3810|consen 106 GPATAA-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPR 184 (433)
T ss_pred ChHHHH-HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCC
Confidence 988644 455678888889999999999998888888888887777666543 133444444544444555666777777
Q ss_pred ChHHHHHcCCHHHHH-HHHHHHhCCcchHHHHHHHHhhcCCCCCCccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHH
Q 015968 284 SPRWLFQQGKKSEAE-KSIQTLYGKERVSEVMLDLTNAGQGSAEPEAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVV 362 (397)
Q Consensus 284 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.++...-+.+.++.. ....+.....+..+ -++ .....+.+-++.-+.++.++-+.+++....+|++-+.
T Consensus 185 v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~---~l~-------~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~ 254 (433)
T KOG3810|consen 185 VKRSLYFHRLEDKISVGDLEEMNPQASYMS---YLR-------GAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVT 254 (433)
T ss_pred CchhhhhhcccccceeccchhcCccchhhH---HHH-------HHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHH
Confidence 765332222211110 00000000000000 000 0001111112223444566667778888888889899
Q ss_pred HhHHHHHHHc
Q 015968 363 YYSTSVFRSV 372 (397)
Q Consensus 363 ~~~~~~~~~~ 372 (397)
+|...+.++.
T Consensus 255 nY~Q~LW~~~ 264 (433)
T KOG3810|consen 255 NYTQILWKEV 264 (433)
T ss_pred HHHHHHHHhh
Confidence 9988887775
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.57 E-value=0.0004 Score=65.41 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=85.4
Q ss_pred HHHHHhhHHHHHHHHHHHhh---c------hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCccc---chhhhhHHHHHH
Q 015968 172 RTFQLDAVPLAAGAFLCATA---Q------SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEI---RGALGSVNQLFI 239 (397)
Q Consensus 172 ~~l~~~~~~~~~~~~~~~~~---~------~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~ 239 (397)
++++++.++..++.++..++ . ..+.++++-++.++|.|+.=+....+.+|.+++++ |.....+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46777888888888774433 1 23568888889999999999999999999998763 467788899999
Q ss_pred HHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhcc
Q 015968 240 CVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL 280 (397)
Q Consensus 240 ~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 280 (397)
++|..++..+.+.+.++ .+|.+.|.+.++..++.++.++.
T Consensus 82 n~G~~~~~~~~~~i~~~-~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQN-YGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHC-S-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccc-cchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999999888766 89999999988888777665554
No 252
>PRK03612 spermidine synthase; Provisional
Probab=97.54 E-value=0.0097 Score=58.39 Aligned_cols=139 Identities=15% Similarity=0.049 Sum_probs=78.2
Q ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHH--HH-HHHHHH----HhhchH-HHHHHH
Q 015968 129 YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP--LA-AGAFLC----ATAQSV-QTMIIG 200 (397)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~--~~-~~~~~~----~~~~~~-~~~~~~ 200 (397)
.+.--+|.+..+. +.+++++.+|.++|+.+++++.++.-++... +-..+ .+ ++..+. ++.... ..++..
T Consensus 40 ~l~~~~G~s~~~~--~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~ 116 (521)
T PRK03612 40 LASYLLGDSVTQF--STVIGLMLFAMGVGALLSKYLLRDAAAGFVA-VELLLALLGGLSALILYAAFAFQGLSRLLLYVL 116 (521)
T ss_pred HHHHHhCchHHHH--HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567776666 8999999999999999998887443333221 11111 11 111111 111111 122333
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
.++.++..|+..|....+..+... ++-+...|..+....+|+++|.++.+++.-...|-....++.+++.
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~ 186 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLN 186 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 456678888888877766654332 1235667777788888888888887776542244333333333333
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.50 E-value=0.0031 Score=58.93 Aligned_cols=106 Identities=22% Similarity=0.147 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHH--HHHHHHH---HHhhchHHHHHHHHHHHHHhhhhhhhhhhhh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP--LAAGAFL---CATAQSVQTMIIGRVLAGIGIGISSAIVPLY 218 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~--~~~~~~~---~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 218 (397)
.+...+|.+|-.++.--...+ |+ |+..+.+.+- ..+..++ .-+.++.|.+++.-+..|+..|..+......
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~ 359 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYR 359 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 677777777655554322211 33 3333333222 2222222 2345788988888999999999999999999
Q ss_pred hhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 219 ISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 219 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
+.|-.++++|..++|....+-.+|..++.+++..+
T Consensus 360 I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 360 ISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999988887654
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.50 E-value=0.0038 Score=61.64 Aligned_cols=156 Identities=18% Similarity=0.160 Sum_probs=114.5
Q ss_pred hhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-cchHHHHHHhhHHHHHHHHHHHhhc-------
Q 015968 121 GVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK-FGRTRTFQLDAVPLAAGAFLCATAQ------- 192 (397)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~------- 192 (397)
+....++.++..+++.....+ .-..+.+.-.....++++++++|- +||-+++.++.++..++.++..++.
T Consensus 55 g~~~nlv~ylt~~~~~~~~~a--a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGGA--ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred cchhHHHHHHHHHhccchHHH--HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 344567889999999888655 566777777777888999999996 5888999999888888865443321
Q ss_pred ---------------h---HHHHHHHHHHHHHhhhhhhhhhhhhhhcccC---cccc---hhhhhHHHHHHHHHHHHHHH
Q 015968 193 ---------------S---VQTMIIGRVLAGIGIGISSAIVPLYISEISP---TEIR---GALGSVNQLFICVGILAALV 248 (397)
Q Consensus 193 ---------------~---~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~---~~~r---~~~~~~~~~~~~~g~~~~~~ 248 (397)
+ ...++....+..+|.|+.-+...++-+|-++ ++++ ...+.++.....+|.+++-.
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 1 1245555566777888888988899999998 3222 46778888888999888877
Q ss_pred HhhhcCCCCcchHHHHHHhHHHHHHHHHHhc
Q 015968 249 AGLPLAGNPLWWRTMFGLAAIPSILLALGMG 279 (397)
Q Consensus 249 ~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 279 (397)
+...+.+. .+|.+.|.+..+..++.+++++
T Consensus 213 ~~vyiq~~-~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 213 VLVYIQDN-VGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHhhhhc-ccceeeccHHHHHHHHHHHHHH
Confidence 76666555 8999999887776655554433
No 255
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.49 E-value=0.0077 Score=55.08 Aligned_cols=135 Identities=15% Similarity=0.117 Sum_probs=83.9
Q ss_pred HHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc-----ccchHHHH-HHhhHHHHHH
Q 015968 111 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD-----KFGRTRTF-QLDAVPLAAG 184 (397)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-----~~Grr~~l-~~~~~~~~~~ 184 (397)
+...+.+...+... .+|.+.+.-|.|.++. +....++ . -..--++|.++.| |+||||.- +-+..+.+..
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~--a~fS~ay-~-P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~ 112 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ--AIFSFAY-W-PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLF 112 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcCCCcchhhh--hhhhhhh-h-HHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHH
Confidence 33445555566655 7888888777776654 3222221 1 1233578999999 99988743 4444555555
Q ss_pred HHHHHhh-----------chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHh
Q 015968 185 AFLCATA-----------QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAG 250 (397)
Q Consensus 185 ~~~~~~~-----------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 250 (397)
+++.+.. ++...+....++.-+.++..-...-.+.-.+..+++-|.+......+...|..++..+-
T Consensus 113 mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 113 MLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 5544432 34444555556677777777777777878888888878777766666666666655443
No 256
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.45 E-value=0.05 Score=52.72 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=76.1
Q ss_pred HHHHHHHHH-HHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh---------c---------------------
Q 015968 144 GWIVSSLLA-GATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA---------Q--------------------- 192 (397)
Q Consensus 144 ~~~~~~~~~-~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---------~--------------------- 192 (397)
.++-....+ ...+...+..++++++++.+++-+....+.....+.++. +
T Consensus 61 ~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~ 140 (491)
T PF03219_consen 61 PFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAM 140 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHH
Confidence 344333333 344556778999999999998877776666666555541 0
Q ss_pred -hHHHHHHHHHHHHHhhhhhhh-hhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 193 -SVQTMIIGRVLAGIGIGISSA-IVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 193 -~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
+.|.+.+..++.-+-.....+ .-..+..|.++.++-.+..+++..+.++|.+++..+...+.+
T Consensus 141 ~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 141 FRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444444443334444 457889999999998999999999999999988887776665
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.28 E-value=0.001 Score=62.04 Aligned_cols=151 Identities=14% Similarity=-0.013 Sum_probs=89.0
Q ss_pred HHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccch-HHHHHHhhHHHHHHHHHHH-hh---chHHHHHHHHHHHH
Q 015968 131 AKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR-TRTFQLDAVPLAAGAFLCA-TA---QSVQTMIIGRVLAG 205 (397)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-r~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~r~l~G 205 (397)
...-|.+.... |++.....++.++++.+.|.+.||... |.++++......++..... .. ...+.++..-.+.|
T Consensus 293 l~~sgY~~~~a--G~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g 370 (480)
T KOG2563|consen 293 LCPSGYEGVFA--GYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLG 370 (480)
T ss_pred cccccCCcccc--chhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHH
Confidence 34456665555 999999999999999999999999874 5555555555555532221 11 23344555557788
Q ss_pred Hhhhhhhhhhhhhhhccc-CcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc--chHHH-HHHhHHHHHHHHHHhccC
Q 015968 206 IGIGISSAIVPLYISEIS-PTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL--WWRTM-FGLAAIPSILLALGMGLS 281 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~w~~~-~~~~~~~~~~~~~~~~~~ 281 (397)
++..+.+|+...+-.|.. |..| +...|+.+....+=+++-.++-+...+... +|.+. -+......++.+++..++
T Consensus 371 ~~~~~~~Pig~ElgvE~TyPv~E-~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~ 449 (480)
T KOG2563|consen 371 FFGTGYLPIGFELGVETTYPVAE-GTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFF 449 (480)
T ss_pred HhhcCCCCcceeeeeeeccccCC-cccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhh
Confidence 888888998888888875 5444 555566555444433333344444443312 33432 233334444444444444
Q ss_pred CCC
Q 015968 282 PES 284 (397)
Q Consensus 282 ~e~ 284 (397)
+++
T Consensus 450 r~~ 452 (480)
T KOG2563|consen 450 RPD 452 (480)
T ss_pred hhh
Confidence 433
No 258
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.23 E-value=0.016 Score=55.12 Aligned_cols=135 Identities=18% Similarity=0.160 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchH-------HHHHHhhHHHHHHHHHHHhh----------chHHHHHHHHHHHHH
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRT-------RTFQLDAVPLAAGAFLCATA----------QSVQTMIIGRVLAGI 206 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~G~ 206 (397)
+|..++..+.-++..++..++-.+.+++ .=+-++.++.+++.++.... .+.++++...+++++
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5777787777788888888777774443 22345555555555544332 367889999999999
Q ss_pred hhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC-----CCcchHHHHHHhHHHHHHHHHHh
Q 015968 207 GIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG-----NPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
|+=...++..++++...|++-.+..++.+......|..++..+++.-.. ........|+..+...++..+..
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888888888877777666653110 11345567777777765555443
No 259
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.15 E-value=0.00086 Score=58.16 Aligned_cols=97 Identities=22% Similarity=0.312 Sum_probs=70.6
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 203 (397)
.+..-++-+.+|....+. +.+...-+...++...+.|-++||-|||+.-+.-.+.+.++++ .-.++.+..++++|.+
T Consensus 57 gPYvYyLYstYgFgkG~I--gqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDI--GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVL 133 (454)
T ss_pred CceeeeeehhcCccCCcc--ceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhh
Confidence 344556667788887777 6655555556677778889999999999976655555554443 3456788899999999
Q ss_pred HHHhhhhhhhhhhh-hhhccc
Q 015968 204 AGIGIGISSAIVPL-YISEIS 223 (397)
Q Consensus 204 ~G~~~~~~~~~~~~-~~~~~~ 223 (397)
.|+..+..+...-+ +++|.-
T Consensus 134 GGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 99999888877654 556654
No 260
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.87 E-value=0.0029 Score=59.37 Aligned_cols=126 Identities=21% Similarity=0.169 Sum_probs=73.4
Q ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccch-------HHHHHHhhHH----HHHHHHHHH-hhchHHHHHHHH
Q 015968 134 LGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGR-------TRTFQLDAVP----LAAGAFLCA-TAQSVQTMIIGR 201 (397)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-------r~~l~~~~~~----~~~~~~~~~-~~~~~~~~~~~r 201 (397)
.|.+.++. -++..+...+..+|.+++|.++||+-| .+.=.....+ .+.+.++.. ...+...+.+..
T Consensus 278 ~~~~~~~~--~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il 355 (493)
T KOG1330|consen 278 IGFDHNAT--LIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLIL 355 (493)
T ss_pred hCCccccc--hhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 35455555 577788888999999999999998432 2211111111 111111111 122222233333
Q ss_pred HHHHHh-hhhhhhhhhhhhhcccCcccchhhhhHHHHH-HHHHHHHHHHHhhhcCCCCcchH
Q 015968 202 VLAGIG-IGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLPLAGNPLWWR 261 (397)
Q Consensus 202 ~l~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~~~~w~ 261 (397)
++.|+. .....+...-+..|..|++.|..+.++-... ..+|..-+|-+.|.+.++..+|+
T Consensus 356 ~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 356 FLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 445543 3344555567788999999999999986655 45566666756667766545555
No 261
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.86 E-value=0.11 Score=49.76 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHhhhhhh---cccchHHHHHHhhHHHHHHHHHHHhh------------------chHHHHHHHHHHHH
Q 015968 147 VSSLLAGATVGSFTGGSLA---DKFGRTRTFQLDAVPLAAGAFLCATA------------------QSVQTMIIGRVLAG 205 (397)
Q Consensus 147 ~~~~~~~~~i~~~~~g~l~---d~~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r~l~G 205 (397)
.-...+|..++..+.+.++ +++||++.+.++.++..++.++.-+. +++...++.-++.|
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 3334445555556666666 46799999999988888888776543 24566777789999
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhh
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL 251 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 251 (397)
++-+........++.+.+| ++|..+.+++-.-..++..++.+...
T Consensus 365 ~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred hHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999994 56888888888887777766544433
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.78 E-value=0.099 Score=49.85 Aligned_cols=127 Identities=18% Similarity=0.151 Sum_probs=92.8
Q ss_pred hHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh------c----hHH
Q 015968 126 ALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA------Q----SVQ 195 (397)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~------~----~~~ 195 (397)
.+..+...-|++.... |..-+.-.+....+.++..++.+|+|..+.=+++.....++..++..+ + +..
T Consensus 280 lmt~yl~~~G~s~~~i--gi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~ 357 (432)
T PF06963_consen 280 LMTAYLKSQGYSPSVI--GIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAY 357 (432)
T ss_pred HHHHHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHH
Confidence 4444444559998887 899999999999999999999999998888777777666555444321 1 223
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
.++.+-.+.=+|.-++-....-++.|..|.++||...|.-.....+-.++-.+++..+.
T Consensus 358 ~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 358 LLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34444444445555666677788999999999999999998888888777777665443
No 263
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.70 E-value=0.029 Score=56.73 Aligned_cols=64 Identities=17% Similarity=0.295 Sum_probs=48.0
Q ss_pred hchhhHHHHHHHhCCCchhhHHHHHHHHHHH-HHHHHHHhhhhhhcccc--hHHHHHHhhHHHHHHHHH
Q 015968 122 VVNGALEYLAKDLGIAENTVLQGWIVSSLLA-GATVGSFTGGSLADKFG--RTRTFQLDAVPLAAGAFL 187 (397)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~ 187 (397)
.......++++++|++..+. +++.+...+ +.+++.+++|+++||++ .|+.+.++.++..++.++
T Consensus 349 ~~~~lP~yl~~~~g~s~~~a--g~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 349 YITFLPKYLENQYGISSAEA--NFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHcCCcHHHH--HHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 33445567778899998888 888887665 67899999999999998 556776666666665433
No 264
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.68 E-value=0.019 Score=54.69 Aligned_cols=140 Identities=12% Similarity=0.071 Sum_probs=77.0
Q ss_pred HHHHHHHHHhHhhchhhHHHHHHH--hCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc-----ccchHHHHHH-hhHHH
Q 015968 110 CLGAILFGYHLGVVNGALEYLAKD--LGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD-----KFGRTRTFQL-DAVPL 181 (397)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-----~~Grr~~l~~-~~~~~ 181 (397)
.+.+++.+...+.....+|.+.++ -+++.++. +.. ++...-+ -.-++|.++.| |+||||..++ .-.+.
T Consensus 6 ~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~--~~f-Sla~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 6 VLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQ--AIF-SLASYPF-SLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHcCcccccccccchhhhccccCCCChhHh--eee-eeeechh-HHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 344555566555544467877777 56666655 322 1111111 12456666666 8998875433 33444
Q ss_pred HHHHHHHHhhc------------------------hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHH
Q 015968 182 AAGAFLCATAQ------------------------SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQL 237 (397)
Q Consensus 182 ~~~~~~~~~~~------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 237 (397)
++.++..+..- +...+....++.=+.++..-.++-.+.-.+..+++++.+......
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 54444433221 011233333344444455555555666777778888888777777
Q ss_pred HHHHHHHHHHHHhhhc
Q 015968 238 FICVGILAALVAGLPL 253 (397)
Q Consensus 238 ~~~~g~~~~~~~~~~l 253 (397)
+...|..++..+--.+
T Consensus 162 G~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLAL 177 (544)
T ss_pred HhhhhHHHHHHHHHhh
Confidence 7777777665554444
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.62 E-value=0.031 Score=53.62 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchH-HHHHHhhH---HHHHHHHHHHhh---------chHHHHHHHHHHHHHhhhh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRT-RTFQLDAV---PLAAGAFLCATA---------QSVQTMIIGRVLAGIGIGI 210 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr-~~l~~~~~---~~~~~~~~~~~~---------~~~~~~~~~r~l~G~~~~~ 210 (397)
-....+++++-.+|..+..+.. .-++| +.+.+..+ ++....++|..- ++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3556666777777766544321 11222 13333232 233333344322 3556677778999999998
Q ss_pred hhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhh
Q 015968 211 SSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL 251 (397)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 251 (397)
.......+..+..++++|..+..+...+..+|..+|..++.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999988888888888888888877654
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.42 E-value=0.021 Score=54.92 Aligned_cols=149 Identities=11% Similarity=0.022 Sum_probs=96.2
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh----------chHHHHHHHHHHHH
Q 015968 136 IAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA----------QSVQTMIIGRVLAG 205 (397)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~G 205 (397)
.+.... +.+..+..++..+|..+.....-+..-|+++.++.++.++..+..... ++.+..+.--++..
T Consensus 252 fs~~f~--~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~ 329 (433)
T PF03092_consen 252 FSPSFY--GTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEE 329 (433)
T ss_pred cCHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHH
Confidence 555544 777777777778888888777777788888888887777665542211 11122222335555
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCC-------CcchHHHHHHhHHHHHHHHHHh
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGN-------PLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
+.....+.....+++++.|+..-|+..++..+..++|..++..++..+.+. ..+-.+..++..++.++.+.+.
T Consensus 330 ~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll 409 (433)
T PF03092_consen 330 VIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLL 409 (433)
T ss_pred HHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 555566666778899999998889999999999999888887777766432 1122234444455554555555
Q ss_pred ccCCCChH
Q 015968 279 GLSPESPR 286 (397)
Q Consensus 279 ~~~~e~~~ 286 (397)
.++|+..+
T Consensus 410 ~lLp~~~~ 417 (433)
T PF03092_consen 410 FLLPPQKR 417 (433)
T ss_pred HHcCCCch
Confidence 56666543
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.31 E-value=0.062 Score=51.56 Aligned_cols=49 Identities=10% Similarity=0.003 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHH
Q 015968 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAA 246 (397)
Q Consensus 193 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 246 (397)
.++..++.-++.|++.+.......++.+ .+|++. +..+..+.+++++++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~ 153 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLT 153 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHH
Confidence 4566667778889998888888777766 566543 333344444444443
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.75 E-value=0.023 Score=54.44 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=55.9
Q ss_pred HHHHHH-HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHH
Q 015968 196 TMIIGR-VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (397)
Q Consensus 196 ~~~~~r-~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~ 273 (397)
.+++.+ ++.|++.-.......++-++...+++++.+.+++.....++..++|++....... .|.|+...+.+...++
T Consensus 389 ~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~-~g~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 389 LYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL-SGPRPVWIILLCLLLV 466 (488)
T ss_pred hheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh-cCccHHHHHHHHHHHH
Confidence 344443 4556666555556677889999999999999999999999999999988776655 6666666555444433
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.70 E-value=0.71 Score=43.28 Aligned_cols=165 Identities=13% Similarity=-0.004 Sum_probs=77.0
Q ss_pred HhhchhhHHHHHHHhCCCchhh-HHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-------
Q 015968 120 LGVVNGALEYLAKDLGIAENTV-LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA------- 191 (397)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~------- 191 (397)
++.+..+.++..+++-.+..+. ..........+...+....-..+.-|. |+++.....+...+..+.+.++
T Consensus 34 WN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~~~~v~~~~~ 112 (406)
T KOG1479|consen 34 WNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLDLALVKTDTW 112 (406)
T ss_pred hHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 4555557778877775444322 112222333333344444444555552 2222211111112222222221
Q ss_pred --chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHH
Q 015968 192 --QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAI 269 (397)
Q Consensus 192 --~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~ 269 (397)
..+...++.-.+.+++.|..+.......+++ |++.-+..++-.+.++.+-+++--+......+...+=...|.+..+
T Consensus 113 ~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~ 191 (406)
T KOG1479|consen 113 TNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTV 191 (406)
T ss_pred cchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHH
Confidence 2455666677788888888888777776554 5444333333233333333333322333333332333344444455
Q ss_pred HHHHHHHHhccCCCChH
Q 015968 270 PSILLALGMGLSPESPR 286 (397)
Q Consensus 270 ~~~~~~~~~~~~~e~~~ 286 (397)
+.++++++...+|..|-
T Consensus 192 ~~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 192 ILLLCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHHHHhhcchH
Confidence 55555555555666653
No 270
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.23 E-value=0.0051 Score=60.60 Aligned_cols=134 Identities=16% Similarity=0.192 Sum_probs=0.0
Q ss_pred hhchhhHHHHHHHhCCCchhhHHHHHHHHHHH-HHHHHHHhhhhhhcccc--hHHHHHHhhHHHHHHHHHHH---h--hc
Q 015968 121 GVVNGALEYLAKDLGIAENTVLQGWIVSSLLA-GATVGSFTGGSLADKFG--RTRTFQLDAVPLAAGAFLCA---T--AQ 192 (397)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~---~--~~ 192 (397)
+..++...+++.+|+++...+ +++.++..+ +.++|.+++|++..|+. .|..+....+...+..++.. + ++
T Consensus 323 G~~tF~pKylE~QF~~sas~A--~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~ 400 (539)
T PF03137_consen 323 GFATFLPKYLESQFGLSASQA--SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCP 400 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhCCCHHHH--HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCC
Confidence 333445568899999998887 777766555 66788899999999874 45554444444333332210 0 00
Q ss_pred -------------------------------------------------hHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Q 015968 193 -------------------------------------------------SVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (397)
Q Consensus 193 -------------------------------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 223 (397)
.+..+++..++.-+..+.........+-.-.
T Consensus 401 ~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V 480 (539)
T PF03137_consen 401 NPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCV 480 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccC
Confidence 0122333333433433444444445556777
Q ss_pred CcccchhhhhHHHHH-HHHHHHHHHHHhhhcCCC
Q 015968 224 PTEIRGALGSVNQLF-ICVGILAALVAGLPLAGN 256 (397)
Q Consensus 224 ~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~ 256 (397)
++++|..++|+.... ..+|.+-||++-|.+.+.
T Consensus 481 ~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 481 PPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------
T ss_pred ChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 888899999986655 466888888888888765
No 271
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.10 E-value=0.014 Score=55.93 Aligned_cols=71 Identities=23% Similarity=0.286 Sum_probs=56.6
Q ss_pred hHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHh-hHHHHHHHHHHHhh
Q 015968 119 HLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLD-AVPLAAGAFLCATA 191 (397)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~-~~~~~~~~~~~~~~ 191 (397)
..+.+.+.++.+.+++|++..+. |.+.+.--+..+++.|++|+++||+-+|+.++++ ++....+.++..+.
T Consensus 26 ~~g~l~pll~vy~kQLGl~p~~~--Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 26 RFGSLFPLLAVYFKQLGLNPAVV--GTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred cccccchHHHHHHHHcCCCHHHh--hhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 34566778888999999999999 9999999999999999999999999876655554 55555566665553
No 272
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.25 E-value=0.42 Score=43.22 Aligned_cols=73 Identities=18% Similarity=0.138 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Q 015968 150 LLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (397)
Q Consensus 150 ~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 223 (397)
..+..+...++.+.+..++|-|.+++++...+....... +-+.+..++..-.+.|++.+..+..-.+|++++-
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 334455666666788999999999998887776554322 3367788888999999999998888778876654
No 273
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.91 E-value=0.017 Score=52.77 Aligned_cols=106 Identities=21% Similarity=0.218 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHH---HHHHHHHHHh----------hchHHHHHHHHHHHHHhhhhhh
Q 015968 146 IVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVP---LAAGAFLCAT----------AQSVQTMIIGRVLAGIGIGISS 212 (397)
Q Consensus 146 ~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~---~~~~~~~~~~----------~~~~~~~~~~r~l~G~~~~~~~ 212 (397)
...+|+++-.+|..+.++.-=+..+++.+.+..+. +....++|.. -++-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45567777777777766532111123333333222 2222233311 2344667777889999999888
Q ss_pred hhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhh
Q 015968 213 AIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL 251 (397)
Q Consensus 213 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 251 (397)
.....+..+..++++|..+..+...+..+|..+|..++.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH-----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999988888877777788777766653
No 274
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=93.71 E-value=0.58 Score=40.93 Aligned_cols=79 Identities=18% Similarity=0.084 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccc-chHHHHH----HhhHHHHHHHHHHHh-h----chHHHHHHHHHHHHHhhhhhhh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKF-GRTRTFQ----LDAVPLAAGAFLCAT-A----QSVQTMIIGRVLAGIGIGISSA 213 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~~~~~r~l~G~~~~~~~~ 213 (397)
....-++..|+.+|.+..|+.+... -||+.+. .+.+++++..+.... . .+.+.+++.-|+.|++.-+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3445566677778888888887744 4554443 223333333333211 1 1456678888899988777777
Q ss_pred hhhhhhhcc
Q 015968 214 IVPLYISEI 222 (397)
Q Consensus 214 ~~~~~~~~~ 222 (397)
+....-.|.
T Consensus 224 ViL~lPhEy 232 (267)
T PF07672_consen 224 VILNLPHEY 232 (267)
T ss_pred HHhcChhhh
Confidence 766555555
No 275
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.43 E-value=2.9 Score=39.53 Aligned_cols=94 Identities=12% Similarity=0.073 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHH--HHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTF--QLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISE 221 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 221 (397)
|.+-.+..+..+++.+..|.+..++.+-.-+ .+..++.+...++++..+|.|..+++.++.+...-...+++..-++.
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~ 367 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAK 367 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777888888889999999997777764443 34445556666778888999999999988887776777777766666
Q ss_pred ccCcccchhhhhHHHH
Q 015968 222 ISPTEIRGALGSVNQL 237 (397)
Q Consensus 222 ~~~~~~r~~~~~~~~~ 237 (397)
....+.-|..+|+..+
T Consensus 368 ~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 368 NLSEERYALVFGINTF 383 (412)
T ss_pred hccccceeeeeeeHHH
Confidence 6665544666666544
No 276
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.46 E-value=0.37 Score=45.07 Aligned_cols=106 Identities=16% Similarity=0.090 Sum_probs=70.2
Q ss_pred HHHHHH-HHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHH---------hhchHHHHHHHHHHHHHhhhhhhh
Q 015968 144 GWIVSS-LLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCA---------TAQSVQTMIIGRVLAGIGIGISSA 213 (397)
Q Consensus 144 ~~~~~~-~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~r~l~G~~~~~~~~ 213 (397)
-++..+ +++.-.+|.+...++-++=.|+.. +..++-.+..-++. +-.+-+.++..-.+.|+..|=...
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~--i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWPDPRKLT--IPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCCCCceeh--HHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 345555 778888887777666554333322 22222222222222 124567788888999999988888
Q ss_pred hhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhh
Q 015968 214 IVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGL 251 (397)
Q Consensus 214 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 251 (397)
....+..+-.+++++-.+..+.......|..+|..++.
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 88888899999999888877777777777777766543
No 277
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=89.20 E-value=7.5 Score=37.74 Aligned_cols=107 Identities=12% Similarity=0.092 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccch--HHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGR--TRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISE 221 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Gr--r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 221 (397)
|.+-.+..+..++..+..|++-.++.+ ...+-+..++.+...++++..+|.|..+++.++.+.......+++..-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666677778888999998776654 244445555666667778889999999999999998888888888888888
Q ss_pred ccCcccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 222 ISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
....+.-|..+|+..+. +.++=.++...+
T Consensus 381 ~L~~~~~aLvFGiNtfv---Al~LQtilT~iV 409 (511)
T TIGR00806 381 SLSKELCALVFGINTFV---ATALKTIITAVV 409 (511)
T ss_pred HhcccceEEEEecHHHH---HHHHHHheEEEE
Confidence 77766558888876544 333444444333
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=88.92 E-value=0.26 Score=46.64 Aligned_cols=128 Identities=12% Similarity=-0.095 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEIS 223 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 223 (397)
.|-..++.+...+.+...-++++|+|-|+.+..+...+.++..+.+...+.+.....+-..|+-.+....+-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 35566777778888999999999999888777777767777777777777777777777777443333332222222211
Q ss_pred ---------------------Cccc--chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHH
Q 015968 224 ---------------------PTEI--RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPS 271 (397)
Q Consensus 224 ---------------------~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~ 271 (397)
.... +|...|+.++...+-.++..+..|.+.+...+-+..-+..+..+
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s 485 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVA 485 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHH
Confidence 1111 25556666666666666655555555554344444444444444
No 279
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=88.81 E-value=14 Score=31.49 Aligned_cols=43 Identities=14% Similarity=0.151 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHhhhhh---hcccchHHHHHHhhHHHHHHHHH
Q 015968 145 WIVSSLLAGATVGSFTGGSL---ADKFGRTRTFQLDAVPLAAGAFL 187 (397)
Q Consensus 145 ~~~~~~~~~~~i~~~~~g~l---~d~~Grr~~l~~~~~~~~~~~~~ 187 (397)
+......+++.+|..+.+.+ .++..+|+.....+++..+..+.
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~ 95 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLI 95 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 33444455666777777777 23444555555544444444433
No 280
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=87.81 E-value=23 Score=32.79 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=53.1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHH-------HHHHHh--hchHHHHHHHHHHHH
Q 015968 135 GIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG-------AFLCAT--AQSVQTMIIGRVLAG 205 (397)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~-------~~~~~~--~~~~~~~~~~r~l~G 205 (397)
|-.--+. +++++.|.+++.+|+.+.-++.|.--.-+.+..-+++..++ .+.+++ .++-+.+++.-++.|
T Consensus 39 G~~Ilq~--S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG 116 (508)
T COG4262 39 GGGILQT--SLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIG 116 (508)
T ss_pred CCceeeh--HHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 4333444 89999999999999999888877533322222222222221 112221 235567777888889
Q ss_pred Hhhhhhhhhhhhhhhc
Q 015968 206 IGIGISSAIVPLYISE 221 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~ 221 (397)
.-.|.-.|....++..
T Consensus 117 ~LVG~EiPL~mrml~~ 132 (508)
T COG4262 117 VLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHhcchHHHHHHHHH
Confidence 8888888888777755
No 281
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.66 E-value=2.1 Score=37.52 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=33.7
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhhc---C-CCCcchHHHHHHhHHHHHHHHHHhcc
Q 015968 226 EIRGALGSVNQLFICVGILAALVAGLPL---A-GNPLWWRTMFGLAAIPSILLALGMGL 280 (397)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~-~~~~~w~~~~~~~~~~~~~~~~~~~~ 280 (397)
|+|+....+...+.++|.++..+.--.. . .....|++++.+.+++.++-+++..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~i 60 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYII 60 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777888877643321111 1 11246999998888777665555443
No 282
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=82.82 E-value=5.1 Score=36.25 Aligned_cols=69 Identities=19% Similarity=0.101 Sum_probs=57.0
Q ss_pred HHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 185 AFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 185 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
..+..+.++++..++.-+.-|+-.|..+.....-+.+-.++++|-.+++....+-.+|..++.+++-.+
T Consensus 333 ~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 333 QAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 344557789999999989999988888888877777777788899999999999899988888777554
No 283
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=82.77 E-value=1.4 Score=39.72 Aligned_cols=129 Identities=16% Similarity=0.044 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcc
Q 015968 147 VSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTE 226 (397)
Q Consensus 147 ~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 226 (397)
.-.-.+-..+..+....+.||+---.=..+..++.+.+.++.+++++.++-+++..+..++.|.......++.+ .+++
T Consensus 68 LLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y~~- 145 (409)
T KOG3880|consen 68 LLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RYPS- 145 (409)
T ss_pred hhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cCCC-
Confidence 33334445555666667777754333333445667778888889999999888888888877766555444433 3332
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhhcCC-CCcchHHHHHHhHHHHHHHHHHhcc
Q 015968 227 IRGALGSVNQLFICVGILAALVAGLPLAG-NPLWWRTMFGLAAIPSILLALGMGL 280 (397)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~w~~~~~~~~~~~~~~~~~~~~ 280 (397)
..++-+..+.+.++++|..--..+.+ ....-|-..++...+.++.++..++
T Consensus 146 ---~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 146 ---IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred ---ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh
Confidence 23333444444444555444334443 2245666666666555555554444
No 284
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=82.36 E-value=19 Score=27.25 Aligned_cols=41 Identities=27% Similarity=0.393 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHH
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAG 184 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 184 (397)
+.......++..++..+.+.+.|..|.+..+.+..++..+.
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 56666777788888888888888888766655544444433
No 285
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=77.48 E-value=55 Score=29.56 Aligned_cols=77 Identities=21% Similarity=0.205 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHhHhhchhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcc---cchHHHHHHhhHHH
Q 015968 105 FVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADK---FGRTRTFQLDAVPL 181 (397)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~---~Grr~~l~~~~~~~ 181 (397)
..+.+.+++++.-+..+..+..+..+.+.++.-.+.. +++.+.... .+...-.++ ||.||.=+++.++.
T Consensus 26 ~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~--al~lal~A~------~~a~r~~~~~~TfGy~R~eiLaa~~n 97 (296)
T COG1230 26 IALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDAL--ALLLALIAI------KLARRPATKRFTFGYKRLEILAAFLN 97 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHH--HHHHHHHHH------HHhcCCCCCCCCccHhHHHHHHHHHH
Confidence 3444444444444444555556677777777665555 555544433 222333333 78888777776666
Q ss_pred HHHHHHHH
Q 015968 182 AAGAFLCA 189 (397)
Q Consensus 182 ~~~~~~~~ 189 (397)
++..+..+
T Consensus 98 av~Li~~s 105 (296)
T COG1230 98 ALLLIVVS 105 (296)
T ss_pred HHHHHHHH
Confidence 66554443
No 286
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=77.36 E-value=29 Score=32.16 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchH--HHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRT--RTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISE 221 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 221 (397)
|-.-.+..+.++++.+..|.+.-++.|. ..+.++.+..+...++++.++++|..+++.++.........+++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 4445556667788889999997766654 45556666666677778888899888888877777666666777777777
Q ss_pred ccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 222 ISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
....+.-|..+|+..+. +-++-.++...+.+
T Consensus 354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred hhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 77665557777766543 33444455544444
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=77.29 E-value=0.75 Score=42.02 Aligned_cols=43 Identities=9% Similarity=-0.041 Sum_probs=0.0
Q ss_pred HHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHH
Q 015968 201 RVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALV 248 (397)
Q Consensus 201 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 248 (397)
-++.|++.+..+....++.+. +|++.. ..+..+.++++++..+
T Consensus 4 v~~~~~~~~~~q~s~~glas~-~p~~y~----~a~~~Gq~~aGv~~s~ 46 (309)
T PF01733_consen 4 VALIGFANAVLQSSLFGLASL-FPPKYT----QAVMIGQGLAGVIVSL 46 (309)
T ss_dssp ------------------------------------------------
T ss_pred EEEEHhhhHHHhccHHHHHhc-CCHHHH----HHHHhhccHHHHHHHH
Confidence 345667777777777777664 565443 2333444444444433
No 288
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=76.92 E-value=5.9 Score=40.35 Aligned_cols=59 Identities=7% Similarity=0.000 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHH-HHHHHHHHHHHhhhcCC
Q 015968 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLF-ICVGILAALVAGLPLAG 255 (397)
Q Consensus 197 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~ 255 (397)
+++..++.-+..+...+....++-...++++|..++|+..+. ..+|.+-+|++-|++++
T Consensus 589 Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 589 FLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 333333334444444455556667888999999999996665 46788888999888876
No 289
>PRK10263 DNA translocase FtsK; Provisional
Probab=75.80 E-value=16 Score=39.62 Aligned_cols=20 Identities=25% Similarity=0.323 Sum_probs=10.0
Q ss_pred HHHHHHHHHhhhhhhcccch
Q 015968 151 LAGATVGSFTGGSLADKFGR 170 (397)
Q Consensus 151 ~~~~~i~~~~~g~l~d~~Gr 170 (397)
+.++.+|..+...+..-||-
T Consensus 62 Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccchHHHHHHHHHHHHHhH
Confidence 34445555555555445553
No 290
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=74.91 E-value=87 Score=30.57 Aligned_cols=71 Identities=13% Similarity=0.098 Sum_probs=48.3
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcc-cchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTE-IRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~ 273 (397)
++.|+.........-..+.+.+|.+ +|...+|-+....++..++..++++.+.+. .||.....+.-++.++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~-~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRK-YGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 4556666666666667778888753 467888888777777776666666777766 7999877665444433
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=73.81 E-value=25 Score=31.38 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccchH--HHHHHhhHHHHHHHHHHHh----hc---hHHHHHHHHHHHHHhhhhhhh
Q 015968 143 QGWIVSSLLAGATVGSFTGGSLADKFGRT--RTFQLDAVPLAAGAFLCAT----AQ---SVQTMIIGRVLAGIGIGISSA 213 (397)
Q Consensus 143 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~~~~----~~---~~~~~~~~r~l~G~~~~~~~~ 213 (397)
.|.+.+.++++.++|+-+..++..|-..| ..+.+..++.++...+..+ ++ +...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 38889999999999998888776654433 4444444444444333222 11 233335566666777888999
Q ss_pred hhhhhhhcccCcccchhhhhHHHH
Q 015968 214 IVPLYISEISPTEIRGALGSVNQL 237 (397)
Q Consensus 214 ~~~~~~~~~~~~~~r~~~~~~~~~ 237 (397)
...-+=++..|.+.|...+.++-.
T Consensus 364 SimkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheec
Confidence 999899999999999888777654
No 292
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=72.70 E-value=22 Score=31.31 Aligned_cols=24 Identities=0% Similarity=-0.130 Sum_probs=12.1
Q ss_pred hHHHHHHhHHHHHHHHHHhccCCC
Q 015968 260 WRTMFGLAAIPSILLALGMGLSPE 283 (397)
Q Consensus 260 w~~~~~~~~~~~~~~~~~~~~~~e 283 (397)
..+.=++..++.++..+++.+++.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecC
Confidence 444444555555555555555433
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.22 E-value=12 Score=27.66 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccc-chHHHHHH
Q 015968 145 WIVSSLLAGATVGSFTGGSLADKF-GRTRTFQL 176 (397)
Q Consensus 145 ~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~l~~ 176 (397)
+-.+.-+++..+.....||+.|+| |-+++.++
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 344555556666667788999986 44544433
No 294
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=71.91 E-value=24 Score=36.98 Aligned_cols=58 Identities=16% Similarity=0.182 Sum_probs=32.4
Q ss_pred hhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHH
Q 015968 125 GALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 186 (397)
.....+...+|++.... | +++..+|..+.-++....+-|-|.-.+-+...+..-++.+
T Consensus 954 ~~at~IG~vlGIse~Vm--G--lTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnI 1011 (1096)
T TIGR00927 954 WWAHQVGETIGISEEIM--G--LTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDI 1011 (1096)
T ss_pred HHHHHhhhhcCCChhhh--h--hhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchhee
Confidence 35566777788887655 4 3344446666666666666555654444444433333333
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=70.58 E-value=27 Score=28.04 Aligned_cols=51 Identities=18% Similarity=0.154 Sum_probs=34.0
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHH
Q 015968 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILA 245 (397)
Q Consensus 192 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 245 (397)
+++..+++..++.|+|. ..+.+.+++-.+.+++-|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 45555555555555553 3345666777777776799999988887776554
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=67.28 E-value=1.3e+02 Score=29.51 Aligned_cols=65 Identities=12% Similarity=0.174 Sum_probs=42.9
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCccc-chhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHh
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEI-RGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLA 267 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~ 267 (397)
+..|+.........-..+.+.+|.++ +...+|-+....++-.++-.++++.+.+. .||+..-.+.
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~-~GW~~~Alit 355 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRR-FGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHh
Confidence 44566666666666667778887653 35667777666665555555777777766 8999876654
No 297
>PF12832 MFS_1_like: MFS_1 like family
Probab=63.21 E-value=36 Score=23.62 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=25.0
Q ss_pred HhhhhHHHHHhHHHHHHHcCCChh--HHHHHHHHHHHHHhh
Q 015968 354 QLAGINAVVYYSTSVFRSVGIESD--VAASALVGAANVFGN 392 (397)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~ 392 (397)
.+++...+.-|++.++++.|++.. +....+..+..+++.
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~ 52 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAP 52 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 344456677789999999999986 334444444444443
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=62.71 E-value=1.6e+02 Score=28.94 Aligned_cols=48 Identities=17% Similarity=0.120 Sum_probs=36.6
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHH
Q 015968 199 IGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAA 246 (397)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 246 (397)
+..++..+..-..+....++-+.+.+|..=|+.|.+.+...++|+--+
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP 457 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWP 457 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCch
Confidence 334666677777778888888999999888999999988888775433
No 299
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=61.53 E-value=38 Score=28.16 Aligned_cols=26 Identities=27% Similarity=0.427 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHhhhhhhcccchHH
Q 015968 147 VSSLLAGATVGSFTGGSLADKFGRTR 172 (397)
Q Consensus 147 ~~~~~~~~~i~~~~~g~l~d~~Grr~ 172 (397)
..-|.+++.++..+.|++.||.-+|+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~~ 113 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKRN 113 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhccc
Confidence 34577888899999999999988633
No 300
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=60.82 E-value=43 Score=34.18 Aligned_cols=61 Identities=18% Similarity=0.121 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 193 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
+.++.+.-.++.|++.........-+..+-.|+..+....+++.+...+|.++..++...-
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4455666667888888777777777777888999999999999999999998887776543
No 301
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=60.81 E-value=3e+02 Score=31.42 Aligned_cols=20 Identities=10% Similarity=0.119 Sum_probs=11.5
Q ss_pred cchHHHHHHhHHHHHHHHHH
Q 015968 258 LWWRTMFGLAAIPSILLALG 277 (397)
Q Consensus 258 ~~w~~~~~~~~~~~~~~~~~ 277 (397)
.+|+..+++.+++.++.++.
T Consensus 195 ~sw~Lalv~l~~~pl~~~~~ 214 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYICG 214 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHHH
Confidence 57887776655544444433
No 302
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=60.02 E-value=82 Score=28.38 Aligned_cols=57 Identities=16% Similarity=0.034 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 197 MIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 197 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
.-..|.+.|+-. ..+..+.+++.-+||++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888766 344557888899999765432222233444445555566655543
No 303
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=58.19 E-value=34 Score=27.33 Aligned_cols=25 Identities=28% Similarity=0.486 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHH
Q 015968 148 SSLLAGATVGSFTGGSLADKFGRTR 172 (397)
Q Consensus 148 ~~~~~~~~i~~~~~g~l~d~~Grr~ 172 (397)
.-|.+++.++..+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4577788888999999999988764
No 304
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=56.86 E-value=51 Score=21.43 Aligned_cols=45 Identities=16% Similarity=0.148 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCC
Q 015968 239 ICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPES 284 (397)
Q Consensus 239 ~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 284 (397)
..+|.++|.+.+..... ..++....++..+.+++..++....|++
T Consensus 11 ~il~~vvgyI~ssL~~~-~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGV-TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHhCC-CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45666776666554433 3667776666666666666555455544
No 305
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=56.62 E-value=92 Score=27.97 Aligned_cols=35 Identities=14% Similarity=0.046 Sum_probs=17.7
Q ss_pred HHhhHHHHHHHHHHHhh-chHHHHHHHHHHHHHhhh
Q 015968 175 QLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIG 209 (397)
Q Consensus 175 ~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~ 209 (397)
+.+.+++++..++..+. ++.+.+.+.-++.+++.+
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 44455554444444443 455555555555555543
No 306
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=54.61 E-value=48 Score=31.71 Aligned_cols=46 Identities=17% Similarity=0.301 Sum_probs=27.4
Q ss_pred hhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHH
Q 015968 124 NGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRT 173 (397)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~ 173 (397)
.+....+.+.+|+++... | .++...|..+--++...+.-|-|---+
T Consensus 444 VWwa~~iGeT~gIp~eIM--G--LTiLAAGTSIPDlitSvIVARKGlGDM 489 (588)
T KOG1307|consen 444 VWWANIIGETLGIPDEIM--G--LTILAAGTSIPDLITSVIVARKGLGDM 489 (588)
T ss_pred HHHHHHcccccCCCHHHh--h--hhhhhcCCchHHhhHhhhhcccccccc
Confidence 345566777788887655 4 444445555656666666666554443
No 307
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=53.69 E-value=1.9e+02 Score=27.05 Aligned_cols=15 Identities=13% Similarity=0.040 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHhhhc
Q 015968 239 ICVGILAALVAGLPL 253 (397)
Q Consensus 239 ~~~g~~~~~~~~~~l 253 (397)
.+.|.+--|++....
T Consensus 104 ~N~~~lglpi~~~l~ 118 (385)
T PF03547_consen 104 GNTGFLGLPILQALF 118 (385)
T ss_pred CcchhhHHHHHHHHh
Confidence 444444445554444
No 308
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=53.04 E-value=59 Score=26.60 Aligned_cols=67 Identities=15% Similarity=0.170 Sum_probs=29.2
Q ss_pred ccchhhhhccch-hHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHH----cCCChhHHHHHHHHHHHHHhhhhc
Q 015968 328 EAGWFDLFSSRY-WKVVSVGAALFLFQQLAGINAVVYYSTSVFRS----VGIESDVAASALVGAANVFGNYSI 395 (397)
Q Consensus 328 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~g~~~~ 395 (397)
..+|.+.++-+. .+++-.+..+... ...+.....++.+.-++. +|+++.....+...+++.+|.++|
T Consensus 24 ~L~W~~ffkLRk~rrr~~~~~si~t~-~~g~~~g~~yl~~~~~D~~~~I~GlDP~~~~g~~t~a~g~lG~L~G 95 (173)
T PF08566_consen 24 QLTWNEFFKLRKSRRRINLVSSIPTG-LLGSSAGWAYLSTIEIDPTQQIMGLDPFMVYGLATLACGALGWLVG 95 (173)
T ss_pred CCCHHHHHHHHHHhhHHHHHhHHHHH-HHHHHHHHHHHhhccccccccccCcCHHHHHHHHHHHHHHHHHHhc
Confidence 567877776532 2222222222111 111223333333333221 488886444444444445555544
No 309
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=52.57 E-value=1e+02 Score=28.94 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=19.2
Q ss_pred HhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCccc
Q 015968 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEI 227 (397)
Q Consensus 189 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 227 (397)
++++|+.....--.+..+..=...+....++.|.+=.+.
T Consensus 229 ~~gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~L~~Y 267 (374)
T PF01528_consen 229 AIGNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVVLARY 267 (374)
T ss_pred HHhcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345665443333333344443445555666666654443
No 310
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=47.51 E-value=2.4e+02 Score=26.35 Aligned_cols=12 Identities=25% Similarity=0.254 Sum_probs=8.8
Q ss_pred hHHHHHHHHHHH
Q 015968 193 SVQTMIIGRVLA 204 (397)
Q Consensus 193 ~~~~~~~~r~l~ 204 (397)
.+|.+++.|++.
T Consensus 204 ayWLFYiVri~~ 215 (531)
T KOG3814|consen 204 AYWLFYIVRILD 215 (531)
T ss_pred HHHHHHhhhhhc
Confidence 468888887765
No 311
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=45.76 E-value=61 Score=32.50 Aligned_cols=62 Identities=19% Similarity=0.116 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 193 SVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 193 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
+.++++-=.++.|++.........-+.-+-+|++.|..+.+++.....+|..+..++...+.
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777899999999988888889999999999999999999999999999888875543
No 312
>COG1288 Predicted membrane protein [Function unknown]
Probab=45.42 E-value=1.2e+02 Score=28.91 Aligned_cols=23 Identities=4% Similarity=-0.106 Sum_probs=15.5
Q ss_pred CCcchHHHHHHhHHHHHHHHHHh
Q 015968 256 NPLWWRTMFGLAAIPSILLALGM 278 (397)
Q Consensus 256 ~~~~w~~~~~~~~~~~~~~~~~~ 278 (397)
...+||...|+......+..+.+
T Consensus 214 sG~~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 214 SGMGLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred ccchHHHHHHHHHHHHHHHHHHH
Confidence 34789999888776655544433
No 313
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=44.91 E-value=3.8e+02 Score=27.83 Aligned_cols=49 Identities=14% Similarity=0.237 Sum_probs=30.7
Q ss_pred hhhhcc----cchHHHHHHhhHHHHHHHHHHHhh-chHHHHHHHHHHHHHhhhh
Q 015968 162 GSLADK----FGRTRTFQLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIGI 210 (397)
Q Consensus 162 g~l~d~----~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~ 210 (397)
+-++|. -||.+-++++.+++.++.+...+. +..+.+..+-++.+++.++
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 445553 467777788888888777766654 4555555555555555433
No 314
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=44.51 E-value=3.8e+02 Score=28.77 Aligned_cols=21 Identities=24% Similarity=0.276 Sum_probs=15.3
Q ss_pred hhchhhHHHHHHHhCCCchhh
Q 015968 121 GVVNGALEYLAKDLGIAENTV 141 (397)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~ 141 (397)
..+.+.+..+.+.++++....
T Consensus 477 DyFVPSLe~IAekLgLSE~VA 497 (1096)
T TIGR00927 477 EYFVPALGVITDKLQISEDVA 497 (1096)
T ss_pred HHhHHHHHHHHHHhCCcHhhh
Confidence 445556678889999987665
No 315
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=43.85 E-value=2.5e+02 Score=25.57 Aligned_cols=93 Identities=13% Similarity=-0.036 Sum_probs=47.6
Q ss_pred HHHHhhhhhhcccchHHHHHHhhHHHHHHHH-HHH-hhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhh
Q 015968 156 VGSFTGGSLADKFGRTRTFQLDAVPLAAGAF-LCA-TAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGS 233 (397)
Q Consensus 156 i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~-~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 233 (397)
+..-+++.++||-|.-.+=+=|..+.+..+. ... ...++|.-++.-.+.| ..+....++++.....++--...+
T Consensus 22 llaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl~~a~l~g----~l~~ll~a~~ti~l~~nqiisG~a 97 (304)
T COG1079 22 LLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGLLAAALVG----ALFGLLHAFLTIKLRANQIISGLA 97 (304)
T ss_pred HHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHHHHHHHHH----HHHHHHHHHHHHhhccccchhHHH
Confidence 4445677888987765443333333332221 112 2445554444334444 444555666666665555555556
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 015968 234 VNQLFICVGILAALVAGLP 252 (397)
Q Consensus 234 ~~~~~~~~g~~~~~~~~~~ 252 (397)
+.-.+..+...++-...+.
T Consensus 98 lnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 98 LNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 6656666665555544433
No 316
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=43.66 E-value=46 Score=24.73 Aligned_cols=47 Identities=19% Similarity=0.059 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT 190 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~ 190 (397)
|=....|.-.+++.++++++..|+.-+.+.=.+|..+..++..++.+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 66677788888999999999999988777777777776666654433
No 317
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=42.30 E-value=45 Score=18.23 Aligned_cols=15 Identities=20% Similarity=0.140 Sum_probs=5.8
Q ss_pred HHHHHHhccCCCChH
Q 015968 272 ILLALGMGLSPESPR 286 (397)
Q Consensus 272 ~~~~~~~~~~~e~~~ 286 (397)
+..+....+++|+|+
T Consensus 14 lgilffAI~FRePPr 28 (29)
T PF01405_consen 14 LGILFFAIFFREPPR 28 (29)
T ss_dssp HHHHHHHHHSS----
T ss_pred HHHHHhhhhccCCCC
Confidence 334444556777775
No 318
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=42.07 E-value=3.8e+02 Score=27.77 Aligned_cols=43 Identities=14% Similarity=0.133 Sum_probs=28.4
Q ss_pred cchHHHHHHhhHHHHHHHHHHHhh-chHHHHHHHHHHHHHhhhh
Q 015968 168 FGRTRTFQLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIGI 210 (397)
Q Consensus 168 ~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~ 210 (397)
.||.+-++++.++++++.+...+. +..+.+...-++.+++.++
T Consensus 54 ~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 54 TGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 367788888888888888777655 4455555555555655433
No 319
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=41.95 E-value=2.2e+02 Score=27.42 Aligned_cols=55 Identities=13% Similarity=0.221 Sum_probs=22.7
Q ss_pred HHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhh
Q 015968 174 FQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALG 232 (397)
Q Consensus 174 l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~ 232 (397)
+++|+.+...-.++.+++.... +..+.++... ++......|+.-....++|+..+
T Consensus 329 ~LVGlAl~lFYlLLLSlSEhi~-F~~AYliAa~---a~i~Li~~Y~~~vl~~~k~~~~~ 383 (430)
T PF06123_consen 329 LLVGLALVLFYLLLLSLSEHIG-FNLAYLIAAL---ACIGLISLYLSSVLKSWKRGLIF 383 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHH---HHHHHHHHHHHHHHhcchHHHHH
Confidence 3444444444444555554322 2222222222 22333444555555544454433
No 320
>PRK11715 inner membrane protein; Provisional
Probab=41.77 E-value=2.2e+02 Score=27.48 Aligned_cols=19 Identities=5% Similarity=-0.013 Sum_probs=8.9
Q ss_pred HHHhhHHHHHHHHHHHhhc
Q 015968 174 FQLDAVPLAAGAFLCATAQ 192 (397)
Q Consensus 174 l~~~~~~~~~~~~~~~~~~ 192 (397)
+++|+.+...-.++.+++.
T Consensus 335 lLVGlAl~lFYLLLLSlSE 353 (436)
T PRK11715 335 LLVGLALVLFYLLLLSLSE 353 (436)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3444444444444555554
No 321
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=40.96 E-value=3.6e+02 Score=26.48 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=42.9
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcc-cchhhhhHHHHHHHHH-HHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTE-IRGALGSVNQLFICVG-ILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 274 (397)
+..|++.......--.-+.+.+|.+ ++...+|-++...++- .++.-..++-+... .||-+.-.+.=++.++.
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~-~GW~~~AlitPiv~lit 365 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRR-VGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-hhHHHHHHHHHHHHHHH
Confidence 4455665566666556677777763 3566666666555554 44455556666665 78887665554444443
No 322
>PRK02237 hypothetical protein; Provisional
Probab=40.45 E-value=75 Score=23.73 Aligned_cols=47 Identities=15% Similarity=-0.017 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHh
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCAT 190 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~ 190 (397)
|=....|.-.+++.+++++++.|+.-+-+.=.+|..+..++..++.+
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 66777888888999999999999887766667777766666654433
No 323
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=40.33 E-value=18 Score=31.09 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=32.2
Q ss_pred HHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHH
Q 015968 202 VLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVA 249 (397)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 249 (397)
.-.|+|.|..++.+..-+.+.+|. ......++...+..+..+.|-.+
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888888888888888899974 45566666666555555554433
No 324
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=39.83 E-value=1e+02 Score=28.79 Aligned_cols=66 Identities=9% Similarity=0.154 Sum_probs=46.4
Q ss_pred hHHHHHHHhCCC-chhh--HHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh
Q 015968 126 ALEYLAKDLGIA-ENTV--LQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA 191 (397)
Q Consensus 126 ~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 191 (397)
..+...+++.-+ +... ...|.....++|..++..+.+++-|++|-...+.+..+.+.++.+.....
T Consensus 54 i~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 54 ISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 445566667644 2221 23566777778888888888999999999998888888888877766554
No 325
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=39.61 E-value=2.9e+02 Score=24.95 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=13.0
Q ss_pred HHHHHHHHHhhhhhhhh-hhhhhhcccCcc
Q 015968 198 IIGRVLAGIGIGISSAI-VPLYISEISPTE 226 (397)
Q Consensus 198 ~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~ 226 (397)
.+.-.+.+++.|...-+ ..-++.|.+..+
T Consensus 264 ~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 264 IVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33445566655544332 233444444433
No 326
>COG3619 Predicted membrane protein [Function unknown]
Probab=38.61 E-value=2.6e+02 Score=24.19 Aligned_cols=27 Identities=7% Similarity=0.085 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccch
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGR 170 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Gr 170 (397)
.+......+.+++|......+..|..|
T Consensus 58 a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 58 AVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 566677777777776666666666664
No 327
>COG3162 Predicted membrane protein [Function unknown]
Probab=38.17 E-value=1.6e+02 Score=21.59 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=29.8
Q ss_pred ccchhhhhccchhHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHhh
Q 015968 328 EAGWFDLFSSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSVGIESDVAASALVGAANVFGN 392 (397)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 392 (397)
...++++.+.+. ...+.+.+.++..+.++..+..|-|.++..-=+..+.....+++++.++-+
T Consensus 12 ~p~f~eLv~kr~--~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~~~~~Vt~Gip~gvg~fv~t 74 (102)
T COG3162 12 NPRFRELVRKRR--RFAVPLTLIFLVVYFGFILLIAFAPGWLATPLFGASVTRGIPFGVGVFVMT 74 (102)
T ss_pred CHhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcccCCceehhHhHHHHHHHHH
Confidence 455667666533 333333333444444455666677766654211122233444444444443
No 328
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=37.93 E-value=2e+02 Score=27.02 Aligned_cols=13 Identities=8% Similarity=0.289 Sum_probs=9.6
Q ss_pred hcccchHHHHHHh
Q 015968 165 ADKFGRTRTFQLD 177 (397)
Q Consensus 165 ~d~~Grr~~l~~~ 177 (397)
.||+.-.|++.+.
T Consensus 208 ~e~ft~sKllav~ 220 (416)
T KOG2765|consen 208 VERFTLSKLLAVF 220 (416)
T ss_pred cchhhHHHHHHHH
Confidence 8999888876543
No 329
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=36.59 E-value=3.9e+02 Score=28.07 Aligned_cols=13 Identities=15% Similarity=0.051 Sum_probs=5.5
Q ss_pred cchHHHHHHhHHH
Q 015968 258 LWWRTMFGLAAIP 270 (397)
Q Consensus 258 ~~w~~~~~~~~~~ 270 (397)
.+|...+++.+++
T Consensus 128 L~~~~ALLLGAIL 140 (810)
T TIGR00844 128 LNFPASLLMGACI 140 (810)
T ss_pred CCHHHHHHHHhhh
Confidence 3444444444333
No 330
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=36.58 E-value=56 Score=18.09 Aligned_cols=14 Identities=7% Similarity=-0.012 Sum_probs=8.0
Q ss_pred HHHHHhccCCCChH
Q 015968 273 LLALGMGLSPESPR 286 (397)
Q Consensus 273 ~~~~~~~~~~e~~~ 286 (397)
..+....+++|+|+
T Consensus 15 giiFFAIfFRepPr 28 (31)
T PRK11875 15 VTLFFAIAFRDPPK 28 (31)
T ss_pred HHHHHhhhccCCCC
Confidence 33344556777775
No 331
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=36.38 E-value=1.8e+02 Score=21.74 Aligned_cols=23 Identities=9% Similarity=0.034 Sum_probs=12.8
Q ss_pred HHHHhhhhhhhhhhhhhhcccCc
Q 015968 203 LAGIGIGISSAIVPLYISEISPT 225 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~ 225 (397)
+.+.|..+.++...++..|...-
T Consensus 58 ~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 58 ILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHhhHccccccHHHHHHHHHHH
Confidence 34444445556666677676643
No 332
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=36.29 E-value=2.7e+02 Score=23.60 Aligned_cols=8 Identities=13% Similarity=0.127 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 015968 269 IPSILLAL 276 (397)
Q Consensus 269 ~~~~~~~~ 276 (397)
++++++..
T Consensus 185 iig~i~~~ 192 (206)
T PF06570_consen 185 IIGVIAFA 192 (206)
T ss_pred HHHHHHHH
Confidence 33333333
No 333
>COG4769 Predicted membrane protein [Function unknown]
Probab=36.13 E-value=52 Score=26.62 Aligned_cols=50 Identities=14% Similarity=0.018 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 015968 151 LAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGI 206 (397)
Q Consensus 151 ~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 206 (397)
.++.++.+.+.-++..++|+|..-.++.-. .-++.+|..++++.+++.+-
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 334455555666777778877653333322 23456788888887777653
No 334
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=35.46 E-value=4.2e+02 Score=25.67 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=62.1
Q ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHH-HHHHhh--chHHHHHHHHHHHH
Q 015968 129 YLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGA-FLCATA--QSVQTMIIGRVLAG 205 (397)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~-~~~~~~--~~~~~~~~~r~l~G 205 (397)
.+...+|++.++. ..+.+.-.+...++.++.-....+.|-|-....+.-...++. +..... ......+.+-+..|
T Consensus 39 ivg~a~~l~~~~~--~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag 116 (451)
T COG2233 39 LVGLALGLSAEDT--AYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAG 116 (451)
T ss_pred HhccCCCCCHHHH--HHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 4557789998888 899999999999999888764444555544444444444443 333333 23666666666666
Q ss_pred HhhhhhhhhhhhhhhcccCcccchhh
Q 015968 206 IGIGISSAIVPLYISEISPTEIRGAL 231 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~ 231 (397)
+..-..-......+..+|||-.-|..
T Consensus 117 ~~~~li~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 117 LVYFLISPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEeE
Confidence 65433322222277788887655533
No 335
>CHL00031 psbT photosystem II protein T
Probab=33.24 E-value=63 Score=18.20 Aligned_cols=15 Identities=13% Similarity=0.104 Sum_probs=8.8
Q ss_pred HHHHHHhccCCCChH
Q 015968 272 ILLALGMGLSPESPR 286 (397)
Q Consensus 272 ~~~~~~~~~~~e~~~ 286 (397)
+..+....+++|+|+
T Consensus 14 lgilFFAI~FRePPr 28 (33)
T CHL00031 14 LGIIFFAIFFREPPK 28 (33)
T ss_pred HHHHHHhheecCCCC
Confidence 333444556788776
No 336
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=32.02 E-value=1.5e+02 Score=21.12 Aligned_cols=37 Identities=22% Similarity=0.144 Sum_probs=24.2
Q ss_pred HHHhhhhhhcccch-------HHHHHHhhHHHHHHHHHHHhhch
Q 015968 157 GSFTGGSLADKFGR-------TRTFQLDAVPLAAGAFLCATAQS 193 (397)
Q Consensus 157 ~~~~~g~l~d~~Gr-------r~~l~~~~~~~~~~~~~~~~~~~ 193 (397)
+.+.++++.+|.-+ ++.+.++.++...+.+++++.++
T Consensus 34 ~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 34 ASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555555443 77888888888878777777554
No 337
>PRK10692 hypothetical protein; Provisional
Probab=31.89 E-value=1.5e+02 Score=21.03 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=8.5
Q ss_pred hHHHHHHhhHHHHHHHH
Q 015968 170 RTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 170 rr~~l~~~~~~~~~~~~ 186 (397)
||...++|-++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 44455555555555443
No 338
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=31.48 E-value=2.3e+02 Score=21.43 Aligned_cols=44 Identities=14% Similarity=0.055 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhcc
Q 015968 236 QLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGL 280 (397)
Q Consensus 236 ~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 280 (397)
.....++..+|.++++.-.+. .||-|......+..++..++.++
T Consensus 44 ~~i~~ls~~~GG~~a~~~~~~-kG~l~G~~~Gl~y~~il~lis~~ 87 (116)
T PF12670_consen 44 VIIYILSVFIGGFYAGRKAGS-KGWLHGLLVGLLYFLILLLISFL 87 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666666666665 78988876666666555544433
No 339
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=31.31 E-value=56 Score=24.95 Aligned_cols=12 Identities=8% Similarity=-0.208 Sum_probs=6.9
Q ss_pred HHHhccCCCChH
Q 015968 275 ALGMGLSPESPR 286 (397)
Q Consensus 275 ~~~~~~~~e~~~ 286 (397)
+++++++|+.|.
T Consensus 57 i~l~~~lp~~P~ 68 (118)
T PRK10697 57 IILSFALDPMPD 68 (118)
T ss_pred HHHHHhccCCcc
Confidence 344555777664
No 340
>PRK11588 hypothetical protein; Provisional
Probab=31.12 E-value=5e+02 Score=25.63 Aligned_cols=14 Identities=7% Similarity=-0.223 Sum_probs=9.2
Q ss_pred cchHHHHHHhHHHH
Q 015968 258 LWWRTMFGLAAIPS 271 (397)
Q Consensus 258 ~~w~~~~~~~~~~~ 271 (397)
.+||.+.++.....
T Consensus 229 ~~~R~i~~~v~~~i 242 (506)
T PRK11588 229 SGLRIVMWVIFTLI 242 (506)
T ss_pred HHHHHHHHHHHHHH
Confidence 67888776655444
No 341
>KOG3796 consensus Ammonium transporter RHBG [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]
Probab=30.89 E-value=3.7e+02 Score=25.13 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=65.0
Q ss_pred HHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHH---HHHHHHHh----h-chHHHHHHHHH
Q 015968 131 AKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLA---AGAFLCAT----A-QSVQTMIIGRV 202 (397)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~---~~~~~~~~----~-~~~~~~~~~r~ 202 (397)
.+.+|.|.... ++++..+.+=. +.++=|+++.-=|.|.++-+-.++.+ ++.++.++ . .++.++++.-+
T Consensus 76 lrRygfSsV~f--nlllaA~~vQW--aiL~~G~~~~~~~gk~~i~le~ii~Ad~saa~vLIS~gAvLGk~sp~QlliM~~ 151 (442)
T KOG3796|consen 76 LRRYGFSSVGF--NLLLAALGVQW--AILLDGFLSQFPGGKFVIGLESIILADFSAASVLISMGAVLGKVSPAQLLIMAL 151 (442)
T ss_pred HHHccchHHHH--HHHHHHHHHHH--HHHHHHHHHhCCCCeEEEEeHHHhhhhHhHhHHhhhhchhhcCCCHHHHHHHHH
Confidence 46688887666 66666655433 33556666554444443322222211 11111111 1 46777765544
Q ss_pred HHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015968 203 LAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLP 252 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 252 (397)
+ .-..+...--++.+++..+.-|..+.++.++...|-.++-.+.-.
T Consensus 152 f----Ev~~~~~~e~v~~n~~~v~d~g~smtih~FgAYFGLavA~~l~k~ 197 (442)
T KOG3796|consen 152 F----EVTAFGINEMVISNIFNVNDHGGSMTIHAFGAYFGLAVAWCLYKP 197 (442)
T ss_pred H----HHHHHHHHHHHHHHhccccccCCceEEEehhhhhhhhHhhhccCc
Confidence 3 333344556778889988888888888888888887776555443
No 342
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=30.50 E-value=4.2e+02 Score=26.63 Aligned_cols=80 Identities=14% Similarity=0.057 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhc-hHHHHHHHHHHHH-Hhhhhhhhhhhhhhh
Q 015968 143 QGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQ-SVQTMIIGRVLAG-IGIGISSAIVPLYIS 220 (397)
Q Consensus 143 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G-~~~~~~~~~~~~~~~ 220 (397)
.|+...++.+|...|+-+..-+.+ .|-+.. +++.++..+..++..+.. -+.-+=.. ...| ++.+...+...++..
T Consensus 452 ~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 452 LGLALFIAVVGLSAGPQAVTAIKE-MGLTLF-LLGIVVTILPLIITMLIGKYVLKYDPA-LLLGALAGARTATPALGAVL 528 (562)
T ss_pred HhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCHH-HHHHHhhccCCCcHHHHHHH
Confidence 377777777777777777666643 554444 344444444433322211 11111111 2233 344455556667777
Q ss_pred cccCc
Q 015968 221 EISPT 225 (397)
Q Consensus 221 ~~~~~ 225 (397)
|..+.
T Consensus 529 ~~~~~ 533 (562)
T TIGR03802 529 ERAGS 533 (562)
T ss_pred HhcCC
Confidence 76643
No 343
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=29.97 E-value=16 Score=28.51 Aligned_cols=16 Identities=38% Similarity=0.289 Sum_probs=7.9
Q ss_pred HHHHHHhHHHHHHHHH
Q 015968 261 RTMFGLAAIPSILLAL 276 (397)
Q Consensus 261 ~~~~~~~~~~~~~~~~ 276 (397)
||+++++.++++++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4666555444444433
No 344
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=29.92 E-value=5.1e+02 Score=24.87 Aligned_cols=56 Identities=14% Similarity=0.000 Sum_probs=42.3
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 200 GRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
...+.+...-..+....+..+.+.++..-|+.|.+.+.-.++|+.-...+...+.+
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 34666666666777778899999999999999999999888886655555555544
No 345
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.48 E-value=3e+02 Score=26.55 Aligned_cols=29 Identities=21% Similarity=0.336 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhc----ccchHH
Q 015968 144 GWIVSSLLAGATVGSFTGGSLAD----KFGRTR 172 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d----~~Grr~ 172 (397)
|-+.+...+.+++.+++.|+.+- |.|-|+
T Consensus 326 Gal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 326 GALLSAAIVVYALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred hHHHHHHHHHHHhcccccccccceeeehhccHH
Confidence 56677777778888888777654 555443
No 346
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=29.43 E-value=2.4e+02 Score=23.79 Aligned_cols=27 Identities=15% Similarity=-0.061 Sum_probs=20.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhhcCC
Q 015968 229 GALGSVNQLFICVGILAALVAGLPLAG 255 (397)
Q Consensus 229 ~~~~~~~~~~~~~g~~~~~~~~~~l~~ 255 (397)
+++.++...+..+|.++|.++..++..
T Consensus 140 ~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 140 GRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 777777777777888888877766643
No 347
>PRK03818 putative transporter; Validated
Probab=28.72 E-value=5.5e+02 Score=25.75 Aligned_cols=78 Identities=9% Similarity=0.043 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhh-chHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATA-QSVQTMIIGRVLAGIGIGISSAIVPLYISEI 222 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 222 (397)
|+...++.+|...|.-+..-+.+..|.+..+ ++.++..+..++..+. .-..-+=..+.+-.++.+...+...+++.|.
T Consensus 438 GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~~~ 516 (552)
T PRK03818 438 GIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFANNL 516 (552)
T ss_pred hHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHhcc
Confidence 6666666666666666666555555655544 3444433333322221 1111111122233344445556666777774
No 348
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=28.48 E-value=5.7e+02 Score=25.04 Aligned_cols=12 Identities=25% Similarity=-0.014 Sum_probs=8.1
Q ss_pred chHHHHHHHHHH
Q 015968 192 QSVQTMIIGRVL 203 (397)
Q Consensus 192 ~~~~~~~~~r~l 203 (397)
-.||.|++.|++
T Consensus 179 ~syWLFY~vrIl 190 (505)
T PF06638_consen 179 FSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHhhheee
Confidence 356777777765
No 349
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=28.22 E-value=4.3e+02 Score=23.48 Aligned_cols=18 Identities=17% Similarity=0.148 Sum_probs=9.0
Q ss_pred chHHHHHHhHHHHHHHHH
Q 015968 259 WWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 259 ~w~~~~~~~~~~~~~~~~ 276 (397)
.=+|.+++.+++.++..+
T Consensus 128 pr~~T~~~~t~LF~iFGl 145 (294)
T KOG2881|consen 128 PRKYTYYLATALFLIFGL 145 (294)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 334555565555444443
No 350
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=27.96 E-value=2.8e+02 Score=21.23 Aligned_cols=22 Identities=18% Similarity=-0.034 Sum_probs=10.7
Q ss_pred HHHHhhhhhhhhhhhhhhcccC
Q 015968 203 LAGIGIGISSAIVPLYISEISP 224 (397)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~ 224 (397)
+.+.|.-+.+....++..|.+.
T Consensus 62 ~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 62 LLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHhchHhhHHHHHHHHHH
Confidence 3344433444555556555553
No 351
>PHA03242 envelope glycoprotein M; Provisional
Probab=27.30 E-value=4.6e+02 Score=25.16 Aligned_cols=54 Identities=13% Similarity=0.020 Sum_probs=24.4
Q ss_pred HhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCccc----chhhhhHHHHHHHHH
Q 015968 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEI----RGALGSVNQLFICVG 242 (397)
Q Consensus 189 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~----r~~~~~~~~~~~~~g 242 (397)
++++|+...+---.+.++..=...+...-++.|.+-.+. -|..+|.+.....+|
T Consensus 243 ~~gNsF~v~~~~~v~~ai~~F~vL~ii~liv~E~vL~~Yv~vl~G~~lG~lia~~~l~ 300 (428)
T PHA03242 243 IAANNFHLSLPGTLVCLTAVFALLVVLLLVVVEGVLSHYVRVLPGPHLGALVAAGIVG 300 (428)
T ss_pred HHhcceeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHH
Confidence 344555433333333333333344445555566554333 255555554444443
No 352
>COG5547 Small integral membrane protein [Function unknown]
Probab=26.95 E-value=1.8e+02 Score=18.83 Aligned_cols=17 Identities=12% Similarity=0.024 Sum_probs=7.5
Q ss_pred HHHHhhHHHHHHHHHHH
Q 015968 173 TFQLDAVPLAAGAFLCA 189 (397)
Q Consensus 173 ~l~~~~~~~~~~~~~~~ 189 (397)
.++.+++...+++++..
T Consensus 10 pIIgglvglliAili~t 26 (62)
T COG5547 10 PIIGGLVGLLIAILILT 26 (62)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 34444444444444433
No 353
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=26.08 E-value=1.6e+02 Score=25.38 Aligned_cols=41 Identities=20% Similarity=-0.137 Sum_probs=19.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHH
Q 015968 230 ALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILL 274 (397)
Q Consensus 230 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 274 (397)
.....+..+..++.++..++.+++. ++.|.+.+.+++..++
T Consensus 25 p~l~~~ml~a~l~~~~v~v~ig~l~----~~~~~~~i~gi~~g~l 65 (224)
T PF13829_consen 25 PKLPWLMLGAFLGPIAVFVLIGLLF----GSWWYWLIIGILLGLL 65 (224)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH----ccHHHHHHHHHHHHHH
Confidence 3344445555555554444444543 2335555555554333
No 354
>PHA03237 envelope glycoprotein M; Provisional
Probab=25.65 E-value=5.8e+02 Score=24.51 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=24.9
Q ss_pred HhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCccc----chhhhhHHHHHHHHH
Q 015968 189 ATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEI----RGALGSVNQLFICVG 242 (397)
Q Consensus 189 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~----r~~~~~~~~~~~~~g 242 (397)
++++|+...+.--.+.++..=...+...-++.|.+-.+. -|..+|.+.....+|
T Consensus 246 ~~gNsF~v~~~~~v~~ai~~F~vl~iiyliv~E~vL~rYv~vl~G~~lG~lia~~~l~ 303 (424)
T PHA03237 246 LLANSFHLTLWQTITVAIGVFVALTLMYLLIVEFVVSRYVHVLPGPALGLLIAYGMLA 303 (424)
T ss_pred HHhcceeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 344565443333333344433444555556666654333 255555544444433
No 355
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=25.57 E-value=1.5e+02 Score=27.39 Aligned_cols=40 Identities=28% Similarity=0.286 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHH
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAA 183 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~ 183 (397)
+..+..+.++.++.+.+.|.|+.++||-+.++.+.+.-..
T Consensus 313 gf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~ 352 (390)
T KOG3097|consen 313 GFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLL 352 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHH
Confidence 8889999999999999999999999999988877655443
No 356
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=25.26 E-value=2.3e+02 Score=22.84 Aligned_cols=28 Identities=18% Similarity=0.202 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccchH
Q 015968 144 GWIVSSLLAGATVGSFTGGSLADKFGRT 171 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr 171 (397)
.++.+...+|..+..+-.|.|+-.+...
T Consensus 99 ~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 99 VLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred HHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 5778888888888888888888777543
No 357
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=25.21 E-value=3e+02 Score=26.83 Aligned_cols=30 Identities=10% Similarity=0.010 Sum_probs=19.3
Q ss_pred chHHHHHHhhHHHHHHHHHHHhhchHHHHH
Q 015968 169 GRTRTFQLDAVPLAAGAFLCATAQSVQTMI 198 (397)
Q Consensus 169 Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 198 (397)
|.|+.+....+.+.++.++.++.+++....
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~f 368 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFF 368 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 444555555566677778888877765544
No 358
>PRK03612 spermidine synthase; Provisional
Probab=24.39 E-value=6.9e+02 Score=24.78 Aligned_cols=42 Identities=21% Similarity=0.218 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhh-hcccchHH-HHHHhhHHHHHHH
Q 015968 144 GWIVSSLLAGATVGSFTGGSL-ADKFGRTR-TFQLDAVPLAAGA 185 (397)
Q Consensus 144 ~~~~~~~~~~~~i~~~~~g~l-~d~~Grr~-~l~~~~~~~~~~~ 185 (397)
|.+.....+|.++|.++.|.+ ...+|-.. .++++.+..+++.
T Consensus 148 g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 148 ATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred hhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 888888899999999888865 55888644 4455554444443
No 359
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.23 E-value=5.9e+02 Score=23.73 Aligned_cols=120 Identities=10% Similarity=-0.018 Sum_probs=57.2
Q ss_pred chhhHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhc----ccchHHHHHHhhHHHHHHHHHHHhh-------
Q 015968 123 VNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLAD----KFGRTRTFQLDAVPLAAGAFLCATA------- 191 (397)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grr~~l~~~~~~~~~~~~~~~~~------- 191 (397)
+-.-.|.+.+|..-.-.-- +++.....++. ++.++...+-. ++.--+++++-+.+..+++++.++-
T Consensus 30 ~wv~lp~lv~elpe~wslp--syl~vvVqla~-lgpLi~tllhk~~~~~i~~VPiif~ll~~a~v~~l~laflW~~ts~V 106 (439)
T KOG4255|consen 30 LWVELPLLVKELPEGWSLP--SYLSVVVQLAN-LGPLIVTLLHKGAPGTIPTVPIIFVLLLLACVCQLGLAFLWHDTSPV 106 (439)
T ss_pred eeeehhHHHhhcCcccccc--hHHHHHHHHHc-chhHHHHHHHhhCCCcCCCCCchhHHHHHHHHHHHHHHHHHhcchhh
Confidence 3345677777765332222 44444444433 33333332221 1112233333334445666665542
Q ss_pred ---chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHh
Q 015968 192 ---QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAG 250 (397)
Q Consensus 192 ---~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 250 (397)
..-|.++..-|...+...........+++.+-|. ...-+..+.++.+.+..+++
T Consensus 107 ~g~~hS~afl~L~F~LAivdc~SnVtFLPFMs~lpp~-----fL~afFvG~GLSaLlPslla 163 (439)
T KOG4255|consen 107 FGALHSWAFLSLLFGLAIVDCTSNVTFLPFMSQLPPA-----FLNAFFVGMGLSALLPSLLA 163 (439)
T ss_pred hcCcchHHHHHHHHHHHHHHhhccchhhhhhhhCChH-----HHHHHHHhccHHHHHHHHHH
Confidence 2234566666666666655555556666655433 23334445556566655554
No 360
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=23.98 E-value=2e+02 Score=20.35 Aligned_cols=17 Identities=29% Similarity=0.473 Sum_probs=8.2
Q ss_pred hHHHHHHhhHHHHHHHH
Q 015968 170 RTRTFQLDAVPLAAGAF 186 (397)
Q Consensus 170 rr~~l~~~~~~~~~~~~ 186 (397)
||...++|-++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMV 19 (89)
T ss_pred chhhHHHhhHHHHHhHH
Confidence 44444555555544443
No 361
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=23.57 E-value=2e+02 Score=18.18 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhhhhhhc-ccchHHHHHHhhHHHH
Q 015968 149 SLLAGATVGSFTGGSLAD-KFGRTRTFQLDAVPLA 182 (397)
Q Consensus 149 ~~~~~~~i~~~~~g~l~d-~~Grr~~l~~~~~~~~ 182 (397)
...++..+.....|+..| ++|.++.+.+..++.+
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 334444555556666666 5676555544433333
No 362
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=23.46 E-value=2.5e+02 Score=19.45 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHHHHHHhccCCCChH
Q 015968 234 VNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSILLALGMGLSPESPR 286 (397)
Q Consensus 234 ~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 286 (397)
+.+....++.+++-++|... ...+..+++.++..++.++ +.+|+=|-
T Consensus 12 l~~~il~~~~iisfi~Gy~~----q~~~~~~~~~~~g~~~~~l--v~vP~Wp~ 58 (76)
T PF06645_consen 12 LMQYILIISAIISFIVGYIT----QSFSYTFYIYGAGVVLTLL--VVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHh--heeCCcHh
Confidence 34444555566665554433 3456666555544443333 33555544
No 363
>PRK04972 putative transporter; Provisional
Probab=23.38 E-value=4.7e+02 Score=26.24 Aligned_cols=101 Identities=11% Similarity=0.038 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 015968 143 QGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLAGIGIGISSAIVPLYISEI 222 (397)
Q Consensus 143 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 222 (397)
.++...+|.+|+..|+-++.-+-. .-.+.++.+.++..++.+.......+..+=.....-.++.+...+.......|.
T Consensus 64 ~gl~lF~~~vG~~~Gp~F~~~l~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aGa~T~tp~l~~a~~~ 141 (558)
T PRK04972 64 LGFMLFIFCVGVEAGPNFFSIFFR--DGKNYLMLALVMVGSALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDT 141 (558)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccccCcHHHHHHHHH
Q ss_pred cCc------------ccchhhhhHHHHHHHHHHHH
Q 015968 223 SPT------------EIRGALGSVNQLFICVGILA 245 (397)
Q Consensus 223 ~~~------------~~r~~~~~~~~~~~~~g~~~ 245 (397)
... .+-+.+.+..+....++.++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~vgYa~~y~~g~i~~i~ 176 (558)
T PRK04972 142 LRHSGAESRQLSLALDNLSLGYALTYLIGLVSLIV 176 (558)
T ss_pred HhccCccccchhcccCccchhHHhHHHHHHHHHHH
No 364
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=23.11 E-value=2.3e+02 Score=18.90 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=18.3
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCccc
Q 015968 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEI 227 (397)
Q Consensus 192 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 227 (397)
-+++.+.......++..+.... ...+++|..+.++
T Consensus 26 i~it~F~~n~~~g~i~i~I~l~-l~G~isE~i~~~K 60 (63)
T PF06341_consen 26 INITAFLINQIAGLISIGITLF-LAGLISEFISKQK 60 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcc
Confidence 3444444444444455544443 3467788776633
No 365
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=22.86 E-value=1.7e+02 Score=24.00 Aligned_cols=29 Identities=21% Similarity=0.100 Sum_probs=12.5
Q ss_pred HhCCCchhhHHHHHHHHHHHHHHHHHHhh
Q 015968 133 DLGIAENTVLQGWIVSSLLAGATVGSFTG 161 (397)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 161 (397)
-+|++.-.....-.++...+|+.+|+.++
T Consensus 71 I~GlDP~~~~g~~t~a~g~lG~L~GP~~G 99 (173)
T PF08566_consen 71 IMGLDPFMVYGLATLACGALGWLVGPSLG 99 (173)
T ss_pred ccCcCHHHHHHHHHHHHHHHHHHhcchHH
Confidence 35666544322223333444444444433
No 366
>PRK12996 ulaA PTS system ascorbate-specific transporter subunit IIC; Reviewed
Probab=22.72 E-value=7.2e+02 Score=24.19 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=32.3
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHH-HHHHHHHHHHHHHHh
Q 015968 192 QSVQTMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVN-QLFICVGILAALVAG 250 (397)
Q Consensus 192 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~ 250 (397)
+++...+++-++.|+-.+..-.....+.-+....+ +.++|-+ ..+..++..+|..++
T Consensus 146 ~~~~~Ii~g~l~lG~y~~v~pal~~~~~~kiTg~d--~~aiGH~~~~g~~~s~~ig~~~G 203 (463)
T PRK12996 146 EGVGLVFTGSLILGLVMAFFPALAQRYMRRITGTD--DIAFGHFGTLGYVLSGWIGSLCG 203 (463)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCC--CeEEEehhhHHHHHHHHHHHHhC
Confidence 45555666667777766555555556666666544 4555633 334455555555554
No 367
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=22.48 E-value=2e+02 Score=22.66 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=16.6
Q ss_pred hhhcccCcccchhhhhHHHHHHH
Q 015968 218 YISEISPTEIRGALGSVNQLFIC 240 (397)
Q Consensus 218 ~~~~~~~~~~r~~~~~~~~~~~~ 240 (397)
-+.|++|+..|....+.+.....
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHH
Confidence 35799999999877666654433
No 368
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=22.36 E-value=4.1e+02 Score=24.37 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcC
Q 015968 196 TMIIGRVLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLA 254 (397)
Q Consensus 196 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 254 (397)
.+.++-++.|++.+..-........|.+... .....-++......|...||+++..+.
T Consensus 210 aF~isa~~AGiAGaL~a~~~~~v~p~~f~~~-~S~~~l~~vvlGG~Gt~~G~v~Ga~l~ 267 (314)
T COG4177 210 AFVISAAIAGIAGALYALYLGFVSPESFSFT-LSIEVLAMVVLGGAGTLFGALLGAVLV 267 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhceeChhhccHH-HHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 3555556666664333222222223333322 233333334445556778888877664
No 369
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=22.19 E-value=3.2e+02 Score=23.66 Aligned_cols=54 Identities=24% Similarity=0.343 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHH
Q 015968 150 LLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVL 203 (397)
Q Consensus 150 ~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 203 (397)
..+|..+|..+..++.||+-...+-..+++...++.-...-.++...++++-.+
T Consensus 11 Il~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvl 64 (226)
T PF04474_consen 11 ILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLVILSLVL 64 (226)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 445677777777888888877777777777777776655555555554444333
No 370
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=22.00 E-value=4.4e+02 Score=21.53 Aligned_cols=60 Identities=5% Similarity=-0.259 Sum_probs=34.2
Q ss_pred ccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCc-----chHHHHHHhHHHHHHHHHHhccC
Q 015968 222 ISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPL-----WWRTMFGLAAIPSILLALGMGLS 281 (397)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-----~w~~~~~~~~~~~~~~~~~~~~~ 281 (397)
.++..++....+.+.++...+...=-++-+.+..... .+...+|+.++++.+..+++-.+
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V 78 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSV 78 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccc
Confidence 3444455555555555554444333344444433322 57788899999988877765333
No 371
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.91 E-value=1.7e+02 Score=27.02 Aligned_cols=8 Identities=0% Similarity=-0.313 Sum_probs=4.1
Q ss_pred hhhcccch
Q 015968 163 SLADKFGR 170 (397)
Q Consensus 163 ~l~d~~Gr 170 (397)
|+.|+.-.
T Consensus 181 W~yep~~~ 188 (372)
T KOG2927|consen 181 WIYEPRPL 188 (372)
T ss_pred EeccCCch
Confidence 55555443
No 372
>PTZ00101 rhomboid-1 protease; Provisional
Probab=21.37 E-value=6e+02 Score=22.81 Aligned_cols=38 Identities=13% Similarity=0.062 Sum_probs=23.6
Q ss_pred HHHHHHHHhhhhhhc-ccchHHHHHHhhHHHHHHHHHHH
Q 015968 152 AGATVGSFTGGSLAD-KFGRTRTFQLDAVPLAAGAFLCA 189 (397)
Q Consensus 152 ~~~~i~~~~~g~l~d-~~Grr~~l~~~~~~~~~~~~~~~ 189 (397)
+.+++.....|...+ .+|+++.+++-.+....+.++.+
T Consensus 119 l~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s~ 157 (278)
T PTZ00101 119 FFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILSS 157 (278)
T ss_pred HHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 344555566666555 58998887666665555555543
No 373
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=21.32 E-value=4.2e+02 Score=22.75 Aligned_cols=54 Identities=19% Similarity=0.288 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhhhhhcccchHHHHHHhhHHHHHHHHHHHhhchHHHHHHHHHHH
Q 015968 151 LAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLA 204 (397)
Q Consensus 151 ~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 204 (397)
.+|..+|..+..++.||+-+-.+-..|+....++.-....++|....++.-.+-
T Consensus 13 l~G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv~G 66 (228)
T COG1811 13 LIGGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMILLALVIG 66 (228)
T ss_pred HHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 345666667777777777666666777777777766666677776655554433
No 374
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=21.30 E-value=3.1e+02 Score=19.51 Aligned_cols=65 Identities=15% Similarity=0.129 Sum_probs=34.0
Q ss_pred HHhhhhhhhhhhhhhhcccCcccchhhhhHHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhHHHHHH
Q 015968 205 GIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICVGILAALVAGLPLAGNPLWWRTMFGLAAIPSIL 273 (397)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~ 273 (397)
|++-=...+..+.++.|..-. ....++..+...+|..+|.+....+... ...+..+....+.+++
T Consensus 5 GigRFayTplLP~M~~~~~ls---~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLS---LSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVL 69 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHH
Confidence 444334455666666665432 2334555666667777777776665543 3344444444333333
No 375
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.25 E-value=3.3e+02 Score=19.78 Aligned_cols=24 Identities=17% Similarity=0.427 Sum_probs=14.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhc
Q 015968 230 ALGSVNQLFICVGILAALVAGLPL 253 (397)
Q Consensus 230 ~~~~~~~~~~~~g~~~~~~~~~~l 253 (397)
++=-.+.....+|+++|.+.|.+.
T Consensus 23 kaEr~~q~ilti~aiVg~i~Gf~~ 46 (101)
T KOG4112|consen 23 KAERFQQLILTIGAIVGFIYGFAQ 46 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666677777777666543
No 376
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=20.97 E-value=95 Score=20.50 Aligned_cols=28 Identities=21% Similarity=0.264 Sum_probs=14.6
Q ss_pred cchHHHHHHhHHHH----HHHHHHhccCCCCh
Q 015968 258 LWWRTMFGLAAIPS----ILLALGMGLSPESP 285 (397)
Q Consensus 258 ~~w~~~~~~~~~~~----~~~~~~~~~~~e~~ 285 (397)
..+|..|.+..++. ++-+++++++|+.|
T Consensus 29 ~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 29 TLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 44677776655543 22233444567654
No 377
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.88 E-value=2.5e+02 Score=21.05 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=19.9
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHhhhhhhhh
Q 015968 183 AGAFLCATAQSVQTMIIGRVLAGIGIGISSAI 214 (397)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 214 (397)
++.++=-++++-.+.++...+.|++.|.....
T Consensus 62 iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 62 IGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 44444455655555666778888887665443
No 378
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=20.68 E-value=4.4e+02 Score=23.20 Aligned_cols=7 Identities=29% Similarity=0.610 Sum_probs=3.3
Q ss_pred hhhcccC
Q 015968 218 YISEISP 224 (397)
Q Consensus 218 ~~~~~~~ 224 (397)
......|
T Consensus 56 ~~~k~lP 62 (249)
T PF10225_consen 56 QLSKLLP 62 (249)
T ss_pred HHHHHcc
Confidence 3345555
No 379
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=20.61 E-value=2.8e+02 Score=19.62 Aligned_cols=32 Identities=19% Similarity=0.048 Sum_probs=18.7
Q ss_pred HHHHHhhhcCC-CCcchHHHHHHhHHHHHHHHH
Q 015968 245 AALVAGLPLAG-NPLWWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 245 ~~~~~~~~l~~-~~~~w~~~~~~~~~~~~~~~~ 276 (397)
+|++++..+.+ ...||...||+.+-.+++..+
T Consensus 28 ~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fv 60 (81)
T PF13937_consen 28 VGILFADELNQITFGGFPLGFWFAAQGSIIVFV 60 (81)
T ss_pred HHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHH
Confidence 33445544432 237899999887655544443
No 380
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=20.46 E-value=1.8e+02 Score=22.34 Aligned_cols=28 Identities=14% Similarity=-0.127 Sum_probs=13.6
Q ss_pred chHHHHHHhHHHHH------HHHHHhccCCCChH
Q 015968 259 WWRTMFGLAAIPSI------LLALGMGLSPESPR 286 (397)
Q Consensus 259 ~w~~~~~~~~~~~~------~~~~~~~~~~e~~~ 286 (397)
-.|.+|++..++.. +-+++++++|+.|.
T Consensus 30 ~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~ 63 (121)
T TIGR02978 30 LVRILVVSALLFGGGFFVLVAYIALWLLLDKKPI 63 (121)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcc
Confidence 35666655433321 12334555677664
No 381
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=20.36 E-value=7.8e+02 Score=23.75 Aligned_cols=17 Identities=24% Similarity=0.473 Sum_probs=9.0
Q ss_pred hhhcccchHHHHHHhhH
Q 015968 163 SLADKFGRTRTFQLDAV 179 (397)
Q Consensus 163 ~l~d~~Grr~~l~~~~~ 179 (397)
-+++.+|--..++++.+
T Consensus 344 SlSEhi~F~~AYliAa~ 360 (430)
T PF06123_consen 344 SLSEHIGFNLAYLIAAL 360 (430)
T ss_pred HHHhhhchHHHHHHHHH
Confidence 45666665555544443
No 382
>PF09911 DUF2140: Uncharacterized protein conserved in bacteria (DUF2140); InterPro: IPR018672 This family of conserved hypothetical proteins has no known function.
Probab=20.25 E-value=93 Score=26.01 Aligned_cols=18 Identities=17% Similarity=0.634 Sum_probs=12.2
Q ss_pred chHHHHHHhHHHHHHHHH
Q 015968 259 WWRTMFGLAAIPSILLAL 276 (397)
Q Consensus 259 ~w~~~~~~~~~~~~~~~~ 276 (397)
.|+|+|++...+.++.++
T Consensus 2 ~WK~aF~~Lla~~l~~~~ 19 (187)
T PF09911_consen 2 WWKWAFLILLALNLAFVI 19 (187)
T ss_pred hHHHHHHHHHHHHHHHHh
Confidence 599999887555544443
Done!