BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015971
(397 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic
OS=Solanum tuberosum GN=SS2 PE=1 SV=3
Length = 767
Score = 285 bits (730), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/406 (43%), Positives = 234/406 (57%), Gaps = 58/406 (14%)
Query: 19 VVLFSKNQYRPSSSFSAFRPKKSPIFAFLNNSVSGFSFRSNKSGHLLKVKHVKATGAGFV 78
++L S NQ+ P+ A RPKK + + + ++K VKATG
Sbjct: 5 ILLHSGNQFHPNLPLLALRPKKLSLI------------HGSSREQMWRIKRVKATGENSG 52
Query: 79 EDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRKLVSSIKSDIANSEEDEVSYEER 138
E S +E D+LQ TIEKSKKVLAMQ+ LLQQI+ERRK+VSSIKS +AN++ +Y+
Sbjct: 53 EAASADESNDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLANAKG---TYDGG 109
Query: 139 ENSFSDLDFT-----------STSSSNVVENQNGIIPSSSGD---------HSTANE-AP 177
S SD+D ST+++ + + P+ S D A+E AP
Sbjct: 110 SGSLSDVDIPDVDKDYNVTVPSTAATPITDVDKNTPPAISQDFVESKREIKRDLADERAP 169
Query: 178 KLQSSAANRGPDAGGKESENRL---------SPEKESIDIDSSKLL---KGTDTQSTWSD 225
L S+ S R S ++ +D++S K L G QS
Sbjct: 170 PLSRSSITASSQISSTVSSKRTLNVPPETPKSSQETLLDVNSRKSLVDVPGKKIQSY--- 226
Query: 226 ELPSFLSRTAVISSPKEERHEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAA 285
+PS ++ +S E+R+E + + E +P + KPPPLAG NVMN+ILVA+
Sbjct: 227 -MPSLRKESS--ASHVEQRNENLEGSSAEANEETEDPVNIDEKPPPLAGTNVMNIILVAS 283
Query: 286 ECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEV 345
EC PWSKTGGLGDVAGALPKALARRGHRVMVVAP Y NY EPQD+G+RK Y+VD QD+EV
Sbjct: 284 ECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYDNYPEPQDSGVRKIYKVDGQDVEV 343
Query: 346 AYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGR-EVRNSFIDSPLFC 390
YFQA+IDGVDFVF+DS +FRH+GNNIYGG R ++ + LFC
Sbjct: 344 TYFQAFIDGVDFVFIDSHMFRHIGNNIYGGNRVDILKRMV---LFC 386
>sp|Q9MAC8|SSY2_ARATH Starch synthase 2, chloroplastic/amyloplastic OS=Arabidopsis
thaliana GN=SS2 PE=2 SV=1
Length = 792
Score = 274 bits (700), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 172/380 (45%), Positives = 218/380 (57%), Gaps = 54/380 (14%)
Query: 54 FSFRSNKSGHLLK-VKHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQIS 112
F RS GH K V V+A+G+ +EPED+LQATI+KSKKVLAMQ+ LL QI+
Sbjct: 43 FRSRSFVLGHRCKCVSRVEASGS------DDDEPEDALQATIDKSKKVLAMQRNLLHQIA 96
Query: 113 ERRKLVSSIKSDIANSEEDEVSYEERENSFSDLDFTSTSSSNVVENQNGII-PSSSGDHS 171
ERRKLVSSIK + ++ + S ++ S + + +T + + NG + PS+ G S
Sbjct: 97 ERRKLVSSIKESTPDLDDAKASSKQESASSVNANTDATKKEIMDGDANGSVSPSTYGKSS 156
Query: 172 TANE------------------------------APKLQSSAANRGP----------DAG 191
+ E +P+ S A G D
Sbjct: 157 LSKEPEAKTFSPSTESLKNRKQSSASVISSSPVTSPQKPSDVATNGKPWSSVVASSVDPP 216
Query: 192 GKESENRLSPEKESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSPKEERHEKDLDQ 251
K S SPEK S + S + + WSD LPS+L++ S+ K E++ +
Sbjct: 217 YKPSSVMTSPEKTSDPVTSPGKPSKSRAGAFWSDPLPSYLTKAPQTSTMKTEKYVEKTPD 276
Query: 252 VQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRG 311
V SE EP +E KPPPLAGANVMNVILVAAEC P+SKTGGLGDVAGALPK+LARRG
Sbjct: 277 VAS--SETNEPGKDEEKPPPLAGANVMNVILVAAECAPFSKTGGLGDVAGALPKSLARRG 334
Query: 312 HRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNN 371
HRVMVV P Y YAE +D G+RKRY+V QD+EV YF A+IDGVDFVF+DSP FRHL NN
Sbjct: 335 HRVMVVVPRYAEYAEAKDLGVRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNN 394
Query: 372 IYGGGR-EVRNSFIDSPLFC 390
IYGG R ++ + LFC
Sbjct: 395 IYGGNRLDILKRMV---LFC 411
>sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic
OS=Pisum sativum PE=1 SV=1
Length = 752
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 166/369 (44%), Positives = 220/369 (59%), Gaps = 22/369 (5%)
Query: 33 FSAFRPKKSPIFAFLNNSVS-----GFSFRSNKSGHLLKVKHVKATGAGFVEDESGNEPE 87
F A K +P + LN ++ G + S L +HV+A G F DE+G+ E
Sbjct: 14 FHAKNLKFTPKLSTLNGDLAFSKGLGVGRLNCGSVRLNHKQHVRAVGKSFGADENGDGSE 73
Query: 88 DSL-QATIEKSKKVLAMQKQLLQQISERRKLVSSIKSD-IANSEEDEVSYEERENSFS-- 143
D + ATIEKSKKVLA+Q++L+QQI+ER+KLVSSI SD I E + VSYE E S S
Sbjct: 74 DDVVNATIEKSKKVLALQRELIQQIAERKKLVSSIDSDSIPGLEGNGVSYESSEKSLSRD 133
Query: 144 -DLDFTSTSSSNVVENQNGIIPSSSGDHSTANEAPKLQSSAANRGPDAGGKESENRLSPE 202
+ S+SS + VE + S E + S N+G D E E +
Sbjct: 134 SNPQKGSSSSGSAVETKRWHCFQQLC-RSKETETWAVSSVGINQGFD----EIEKKNDAV 188
Query: 203 KESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSPKEERHEKDLDQVQQIDSEPIEP 262
K S + ++ +K + + ++ S + +++ E +E +V ++E E
Sbjct: 189 KASSKLHFNEQIKNKLYERPDTKDISSSIRTSSLKFENFEGANEPSSKEVAN-EAENFES 247
Query: 263 KTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYG 322
E KPPPLAG NVMN+ILV+AEC PWSKTGGLGDVAG+LPKALARRGHRVM+VAPHYG
Sbjct: 248 GGE--KPPPLAGTNVMNIILVSAECAPWSKTGGLGDVAGSLPKALARRGHRVMIVAPHYG 305
Query: 323 NYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGR-EVRN 381
NYAE D G+RKRY+V QD+EV YF YIDGVD VF+DSP+FR+L +NIYGG R ++
Sbjct: 306 NYAEAHDIGVRKRYKVAGQDMEVTYFHTYIDGVDIVFIDSPIFRNLESNIYGGNRLDILR 365
Query: 382 SFIDSPLFC 390
+ LFC
Sbjct: 366 RMV---LFC 371
>sp|Q0DDE3|SSY23_ORYSJ Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=SSII-3 PE=1 SV=1
Length = 810
Score = 184 bits (468), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 97/121 (80%), Gaps = 4/121 (3%)
Query: 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDT 330
PLAG NVMNVI+VAAEC PW KTGGLGDVAGALPKALARRGHRVMVV P YG+YAE QD
Sbjct: 312 PLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDV 371
Query: 331 GIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGR-EVRNSFIDSPLF 389
GIRK Y+ QD+EV YF A+IDGVDFVF+D+PLFRH ++IYGG R E+ I LF
Sbjct: 372 GIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMI---LF 428
Query: 390 C 390
C
Sbjct: 429 C 429
>sp|P0C586|SSY23_ORYSI Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza
sativa subsp. indica GN=SSII-3 PE=1 SV=1
Length = 810
Score = 184 bits (468), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 97/121 (80%), Gaps = 4/121 (3%)
Query: 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDT 330
PLAG NVMNVI+VAAEC PW KTGGLGDVAGALPKALARRGHRVMVV P YG+YAE QD
Sbjct: 312 PLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDV 371
Query: 331 GIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGR-EVRNSFIDSPLF 389
GIRK Y+ QD+EV YF A+IDGVDFVF+D+PLFRH ++IYGG R E+ I LF
Sbjct: 372 GIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMI---LF 428
Query: 390 C 390
C
Sbjct: 429 C 429
>sp|Q6Z2T8|SSY22_ORYSJ Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=SSII-2 PE=2 SV=2
Length = 694
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 99/128 (77%), Gaps = 4/128 (3%)
Query: 264 TEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGN 323
+E + PLAG NVMNVI+VA+EC P+ KTGGLGDV GALPKALARRGHRVMVV P YG
Sbjct: 189 SENKESGPLAGPNVMNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGE 248
Query: 324 YAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGR-EVRNS 382
YAE +D G+RKRYRV QD EV+YF A+IDGVDFVFL++P FRH N+IYGG R +V
Sbjct: 249 YAEAKDLGVRKRYRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYGGERFDVLKR 308
Query: 383 FIDSPLFC 390
I LFC
Sbjct: 309 MI---LFC 313
>sp|Q7XE48|SSY21_ORYSJ Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=SSII-1 PE=2 SV=2
Length = 749
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 100/133 (75%), Gaps = 2/133 (1%)
Query: 245 HEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALP 304
+E L Q+ ++ E +++ P A +++N+ILVAAEC PWSKTGGLGDVAGALP
Sbjct: 227 YEAQLSQISEMGQSVAEGTSDD--PSASAAVDLINIILVAAECAPWSKTGGLGDVAGALP 284
Query: 305 KALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPL 364
KALARRGHRVMVV P Y NYAEPQ G +RY+V QD+EV Y+ AYIDGVDFVF+D+P+
Sbjct: 285 KALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPI 344
Query: 365 FRHLGNNIYGGGR 377
F H+ N+IYGG R
Sbjct: 345 FHHVENDIYGGDR 357
>sp|Q9FNF2|SSY1_ARATH Starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis
thaliana GN=SS1 PE=2 SV=1
Length = 652
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 18/166 (10%)
Query: 242 EERHEKDLDQVQQID-----SEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGL 296
EE+ E +DQ+ D + +E E P V N++ V +E P+SKTGGL
Sbjct: 102 EEKKEA-IDQIVMADFGVPGNRAVEEGAAEVGIPSGKAEVVNNLVFVTSEAAPYSKTGGL 160
Query: 297 GDVAGALPKALARRGHRVMVVAPHY-------GNYAEPQDTGIRKRYRVDRQDIEVAYFQ 349
GDV G+LP ALA RGHRVMV++P Y NYA +D GIR EV+++
Sbjct: 161 GDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVNCFGGSQEVSFYH 220
Query: 350 AYIDGVDFVFLDSPLFRHLGNNIYGGGREVRNSFIDSPL-FCLVEH 394
Y DGVD+VF+D + GN YG + + +F D+ F L+ H
Sbjct: 221 EYRDGVDWVFVDHKSYHRPGNP-YG---DSKGAFGDNQFRFTLLCH 262
>sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum
tuberosum PE=2 SV=1
Length = 641
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 256 DSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVM 315
D + + TEE + P+ N+I V AE P+SKTGGLGDV G+LP ALA RGHRVM
Sbjct: 111 DRDDLSEDTEEMEETPIK--LTFNIIFVTAEAAPYSKTGGLGDVCGSLPMALAARGHRVM 168
Query: 316 VVAPHYGN-------YAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHL 368
VV+P Y N YA D +R EVA++ Y GVD+VF+D +
Sbjct: 169 VVSPRYLNGGPSDEKYANAVDLDVRATVHCFGDAQEVAFYHEYRAGVDWVFVDHSSYCRP 228
Query: 369 GN---NIYG 374
G +IYG
Sbjct: 229 GTPYGDIYG 237
>sp|Q43784|SSG1_MANES Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Manihot esculenta GN=WAXY PE=2 SV=1
Length = 608
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 7/121 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MN+I V AE GPWSKTGGLGDV G LP A+A RGHRVM V+P Y Y + DT + +
Sbjct: 82 MNLIFVGAEVGPWSKTGGLGDVLGGLPPAMAARGHRVMTVSPRYDQYKDAWDTSVSVEIK 141
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSFIDSPLFC 390
+ + V +F +Y GVD VF+D P+F G+ IYG G + +++ + L C
Sbjct: 142 IGDRIETVRFFHSYKRGVDRVFVDHPMFLEKVWGKTGSKIYGPRAGLDYQDNQLRFSLLC 201
Query: 391 L 391
L
Sbjct: 202 L 202
>sp|Q00775|SSG1_SOLTU Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Solanum tuberosum GN=WAXY PE=1 SV=1
Length = 607
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 244 RHEKDLDQVQQIDSEPIEPKT---EEAKPPPLAGANV----MNVILVAAECGPWSKTGGL 296
R LD +Q + + PK E K P + V MN+I V E GPWSKTGGL
Sbjct: 40 RAVNKLDGLQSRTNTKVTPKMASRTETKRPGCSATIVCGKGMNLIFVGTEVGPWSKTGGL 99
Query: 297 GDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVD 356
GDV G LP ALA RGHRVM ++P Y Y + DT + +V V +F Y GVD
Sbjct: 100 GDVLGGLPPALAARGHRVMTISPRYDQYKDAWDTSVAVEVKVGDSIEIVRFFHCYKRGVD 159
Query: 357 FVFLDSPLFRH-----LGNNIYG 374
VF+D P+F G+ IYG
Sbjct: 160 RVFVDHPMFLEKVWGKTGSKIYG 182
>sp|Q9MAQ0|SSG1_ARATH Probable granule-bound starch synthase 1,
chloroplastic/amyloplastic OS=Arabidopsis thaliana
GN=WAXY PE=2 SV=1
Length = 610
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M+VI + AE GPWSKTGGLGDV G LP ALA RGHRVM + P Y Y + DT + + +
Sbjct: 84 MSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIK 143
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFR-----HLGNNIYG 374
V + V +F Y GVD VF+D P+F G+ IYG
Sbjct: 144 VGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVVGKTGSKIYG 185
>sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum
GN=WSSI-2 PE=2 SV=2
Length = 647
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY------GNYAEPQDTGI 332
+++ V E P++K+GGLGDV G+LP ALA RGHRVMVV P Y NYA+ T
Sbjct: 140 SIVFVTGEAAPYAKSGGLGDVCGSLPIALAARGHRVMVVMPRYLNGSSDKNYAKALYTAK 199
Query: 333 RKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
+ EV +F Y D VD+VF+D P + H ++YG
Sbjct: 200 HIKIPCFGGSHEVTFFHEYRDNVDWVFVDHPSY-HRPGSLYG 240
>sp|A2Y9M4|SSY1_ORYSI Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza
sativa subsp. indica GN=OsI_021017 PE=2 SV=1
Length = 641
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY------GNYAEPQDTGI 332
+V+ V E P++K+GGLGDV G+LP ALA RGHRVMVV P Y N+A T
Sbjct: 134 SVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEK 193
Query: 333 RKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
+ + EV +F Y D VD+VF+D P + H N+YG
Sbjct: 194 HIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSY-HRPGNLYG 234
>sp|Q0DEC8|SSY1_ORYSJ Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza
sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1
Length = 641
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY------GNYAEPQDTGI 332
+V+ V E P++K+GGLGDV G+LP ALA RGHRVMVV P Y N+A T
Sbjct: 134 SVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEK 193
Query: 333 RKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
+ + EV +F Y D VD+VF+D P + H N+YG
Sbjct: 194 HIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSY-HRPGNLYG 234
>sp|Q42857|SSG1_IPOBA Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Ipomoea batatas GN=WAXY PE=2 SV=2
Length = 608
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MN++ V E GPW KTGGLGDV G LP ALA RGHRVM V P Y Y + DT + +
Sbjct: 82 MNLVFVGCEVGPWCKTGGLGDVLGGLPPALAARGHRVMTVCPRYDQYKDAWDTCVVVELQ 141
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSFIDSPLFC 390
V + V +F +Y GVD VF+D P+F G+ +YG G++ +++ + L C
Sbjct: 142 VGDRIEPVRFFHSYKRGVDRVFVDHPMFLEKVWGKTGSMLYGPKAGKDYKDNQLRFSLLC 201
>sp|P04713|SSG1_MAIZE Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea
mays GN=WAXY PE=3 SV=1
Length = 605
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMVV+P Y Y + DT + +
Sbjct: 77 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIK 136
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLF--RHLGNN---IYG--GGREVRNSFIDSPLFC 390
+ V +F Y GVD VF+D PLF R G IYG G + R++ + L C
Sbjct: 137 MGDGYETVRFFHCYKRGVDRVFVDHPLFLERVWGKTEEKIYGPVAGTDYRDNQLRFSLLC 196
>sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic
(Fragment) OS=Hordeum vulgare PE=1 SV=1
Length = 565
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 271 PLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDT 330
P+ + M +I VA E PW KTGGLGDV G LP ALA GHRVM +AP Y Y + DT
Sbjct: 31 PIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDTWDT 90
Query: 331 GIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSF 383
+ V + V +F Y GVD VF+D P+F G+ +YG G + R++
Sbjct: 91 NVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKLYGPTTGTDFRDNQ 150
Query: 384 IDSPLFCL 391
+ L CL
Sbjct: 151 LRFCLLCL 158
>sp|Q43134|SSG1_SORBI Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Sorghum bicolor GN=WAXY PE=2 SV=1
Length = 608
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMVV+P Y Y + DT + +
Sbjct: 82 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIK 141
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLF--RHLGNN---IYG--GGREVRNSFIDSPLFC 390
+ V +F Y GVD VF+D PLF R G IYG G + +++ + L C
Sbjct: 142 MGDGYETVRFFHCYKRGVDRVFIDHPLFLERVWGKTEEKIYGPDAGTDYKDNQLRFSLLC 201
>sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Pisum sativum PE=1 SV=1
Length = 603
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M+++ V AE GPWSKTGGLGDV G LP LA GHRVM V+P Y Y + DT + +
Sbjct: 77 MSLVFVGAEVGPWSKTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVK 136
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSFIDSPLFC 390
V + V +F Y GVD VF+D PLF G+ +YG G + R++ + L C
Sbjct: 137 VGDKIETVRFFHCYKRGVDRVFVDHPLFLERVWGKTGSKLYGPKTGIDYRDNQLRFSLLC 196
>sp|P0C585|SSG1_ORYSA Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Oryza sativa GN=WAXY PE=3 SV=1
Length = 606
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMV++P Y Y + DT + +
Sbjct: 83 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIK 142
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSFIDSPLFC 390
V + V +F Y GVD VF+D P F G IYG G + +++ + L C
Sbjct: 143 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLC 202
>sp|Q0DEV5|SSG1_ORYSJ Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1
Length = 609
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMV++P Y Y + DT + +
Sbjct: 83 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIK 142
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSFIDSPLFC 390
V + V +F Y GVD VF+D P F G IYG G + +++ + L C
Sbjct: 143 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLC 202
>sp|A2Y8X2|SSG1_ORYSI Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2
Length = 609
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMV++P Y Y + DT + +
Sbjct: 83 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIK 142
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSFIDSPLFC 390
V + V +F Y GVD VF+D P F G IYG G + +++ + L C
Sbjct: 143 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLC 202
>sp|Q42968|SSG1_ORYGL Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Oryza glaberrima GN=WAXY PE=1 SV=1
Length = 609
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMV++P Y Y + DT + +
Sbjct: 83 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIK 142
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYG--GGREVRNSFIDSPLFC 390
V + V +F Y GVD VF+D P F G IYG G + +++ + L C
Sbjct: 143 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLC 202
>sp|P27736|SSG1_WHEAT Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Triticum aestivum GN=WAXY PE=1 SV=1
Length = 615
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 57/92 (61%)
Query: 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
G+ MN++ V AE PWSKTGGLGDV G LP A+A GHRVMV++P Y Y + DT +
Sbjct: 73 GSGGMNLVFVGAEMAPWSKTGGLGDVLGGLPAAMAANGHRVMVISPRYDQYKDAWDTSVI 132
Query: 334 KRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLF 365
+V + V YF Y GVD VF+D P F
Sbjct: 133 SEIKVVDRYERVRYFHCYKRGVDRVFVDHPCF 164
>sp|O82627|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Antirrhinum majus GN=WAXY PE=2 SV=1
Length = 608
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 55/88 (62%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MN++ V AE GPWSKTGGLGDV G LP A+A GHRVM V+P Y Y + DT + +
Sbjct: 82 MNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGNGHRVMTVSPRYDQYKDAWDTSVVVEIK 141
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLF 365
V V +F Y GVD VF+D P+F
Sbjct: 142 VGDSIETVRFFHCYKRGVDRVFVDHPIF 169
>sp|P09842|SSG1_HORVU Granule-bound starch synthase 1, chloroplastic/amyloplastic
OS=Hordeum vulgare GN=WAXY PE=1 SV=1
Length = 603
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 55/88 (62%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
MN++ V AE PWSKTGGLGDV G LP A+A GHRVMVV+P Y Y + DT + +
Sbjct: 76 MNLVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIK 135
Query: 338 VDRQDIEVAYFQAYIDGVDFVFLDSPLF 365
V + V +F Y GVD VF+D P F
Sbjct: 136 VADEYERVRFFHCYKRGVDRVFIDHPWF 163
>sp|A7H6L1|GLGA_ANADF Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA
PE=3 SV=1
Length = 475
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M ++ VA+E PWSKTGGLGDVAGALP+ALA RGH V VV P YG +P +R +R
Sbjct: 1 MEILFVASEVAPWSKTGGLGDVAGALPRALAARGHAVSVVTPRYGTI-DPHAHRLRPLHR 59
>sp|B4ULD8|GLGA_ANASK Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3
SV=1
Length = 475
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
M ++ VA+E GPWSKTGGLGDVAGALP+ALA RG+ V VV P +G+ +P+ G++
Sbjct: 1 MQILFVASEVGPWSKTGGLGDVAGALPQALAERGNEVAVVTPRHGSI-DPRAAGLQ 55
>sp|B8J8R4|GLGA_ANAD2 Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 /
ATCC BAA-258) GN=glgA PE=3 SV=1
Length = 477
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
M ++ VA+E GPWSKTGGLGDVAGALP+ALA RG+ V VV P +G+ +P G++
Sbjct: 1 MQILFVASEVGPWSKTGGLGDVAGALPQALAERGNEVAVVTPRHGSI-DPHAAGLQ 55
>sp|Q2IM81|GLGA_ANADE Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=glgA PE=3 SV=1
Length = 475
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
M ++ VA+E PWSKTGGLGDVAGALP+ALA RG+ V+VV P +G+ +P+ G++
Sbjct: 1 MQILFVASEVAPWSKTGGLGDVAGALPRALAERGNEVVVVTPRHGSI-DPRAAGLQ 55
>sp|B5E4N6|GLGA_STRP4 Glycogen synthase OS=Streptococcus pneumoniae serotype 19F (strain
G54) GN=glgA PE=3 SV=1
Length = 477
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|B1IBR0|GLGA_STRPI Glycogen synthase OS=Streptococcus pneumoniae (strain Hungary19A-6)
GN=glgA PE=3 SV=1
Length = 477
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|B2IPY4|GLGA_STRPS Glycogen synthase OS=Streptococcus pneumoniae (strain CGSP14)
GN=glgA PE=3 SV=1
Length = 477
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|Q97QS5|GLGA_STRPN Glycogen synthase OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=glgA PE=3 SV=1
Length = 477
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|C1CEB0|GLGA_STRZJ Glycogen synthase OS=Streptococcus pneumoniae (strain JJA) GN=glgA
PE=3 SV=1
Length = 477
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|B8ZPW5|GLGA_STRPJ Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC 700669 /
Spain 23F-1) GN=glgA PE=3 SV=1
Length = 477
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|Q8DPS3|GLGA_STRR6 Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=glgA PE=3 SV=1
Length = 477
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|Q04KG5|GLGA_STRP2 Glycogen synthase OS=Streptococcus pneumoniae serotype 2 (strain
D39 / NCTC 7466) GN=glgA PE=3 SV=1
Length = 477
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y GN E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLH 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y ++ + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQYCGIKKTV--------LNGVTFYFIDNQYYFFRG-HVYG 100
>sp|Q8E5V5|GLGA_STRA3 Glycogen synthase OS=Streptococcus agalactiae serotype III (strain
NEM316) GN=glgA PE=3 SV=1
Length = 476
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P++KTGGLGDV GALPK+L+++GH V+VV P+Y G+ E
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYYDMVDQKFGDQIENLMY 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
D G R +Y V + D V F F+D+ + + G ++YG
Sbjct: 61 FYTDVGWRHQY--------VGVKRLSQDNVTFYFIDNQYYFYRG-HVYG 100
>sp|A5GKI7|GLGA_SYNPW Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3
SV=1
Length = 524
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M V+ AAEC P K GG+GDV G+LP ALA+ GH V ++ P YG D +R
Sbjct: 1 MRVLFAAAECAPMVKVGGMGDVVGSLPPALAQLGHDVRLIMPGYGKLWSSLDIPAEPIWR 60
Query: 338 VDRQDIEVAYFQAY--IDGVDFVFLDSPLFRHLGNNIYGGGRE-VRNSFIDS 386
E A F+ +G+ + P+F IYGG E R +F S
Sbjct: 61 AQTMGTEFAVFETRHPTNGLPLYLVGHPVFDP--ERIYGGEDEDWRFTFFAS 110
>sp|Q8E079|GLGA_STRA5 Glycogen synthase OS=Streptococcus agalactiae serotype V (strain
ATCC BAA-611 / 2603 V/R) GN=glgA PE=3 SV=1
Length = 476
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P++KTGGLGDV GALPK+L+++GH V VV P+Y G+ E
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVAVVMPYYDMVDQKFGDQIENLMY 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
D G R +Y V + D V F F+D+ + + G ++YG
Sbjct: 61 FYTDVGWRHQY--------VGVKRLSQDNVTFYFIDNQYYFYRG-HVYG 100
>sp|Q3K1K2|GLGA_STRA1 Glycogen synthase OS=Streptococcus agalactiae serotype Ia (strain
ATCC 27591 / A909 / CDC SS700) GN=glgA PE=3 SV=1
Length = 476
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAE---- 326
M ++ VAAE P++KTGGLGDV GALPK+L+++GH V VV P+Y G+ E
Sbjct: 1 MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVAVVMPYYDMVDQKFGDQIENLMY 60
Query: 327 -PQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
D G R +Y V + D V F F+D+ + + G ++YG
Sbjct: 61 FYTDVGWRHQY--------VGVKRLSQDNVTFYFIDNQYYFYRG-HVYG 100
>sp|C1CRM3|GLGA_STRZT Glycogen synthase OS=Streptococcus pneumoniae (strain Taiwan19F-14)
GN=glgA PE=3 SV=1
Length = 477
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y + I
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGSQIED--- 57
Query: 338 VDRQDIEVAYFQAY-------IDGVDFVFLDSPLFRHLGNNIYG 374
V ++ V + + Y ++GV F F+D+ + G ++YG
Sbjct: 58 VLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFRG-HVYG 100
>sp|C1CKI7|GLGA_STRZP Glycogen synthase OS=Streptococcus pneumoniae (strain P1031)
GN=glgA PE=3 SV=1
Length = 477
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y + I
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGSQIED--- 57
Query: 338 VDRQDIEVAYFQAY-------IDGVDFVFLDSPLFRHLGNNIYG 374
V ++ V + + Y ++GV F F+D+ + G ++YG
Sbjct: 58 VLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFRG-HVYG 100
>sp|C1C7B7|GLGA_STRP7 Glycogen synthase OS=Streptococcus pneumoniae (strain 70585)
GN=glgA PE=3 SV=1
Length = 477
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M ++ VAAE P+SKTGGLGDV GALPK+L + GH V V+ P+Y + I
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGSQIED--- 57
Query: 338 VDRQDIEVAYFQAY-------IDGVDFVFLDSPLFRHLGNNIYG 374
V ++ V + + Y ++GV F F+D+ + G ++YG
Sbjct: 58 VLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFRG-HVYG 100
>sp|A8AYH0|GLGA_STRGC Glycogen synthase OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=glgA PE=3 SV=1
Length = 476
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAEPQ-- 328
M ++ VAAE P+SKTGGLGDV GALPK+L + GH+V V+ P+Y G+ E
Sbjct: 1 MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKHGHQVGVILPYYDMTDAKFGDQVEDLFY 60
Query: 329 ---DTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
G R++Y V + ++GV F F+D+ + G ++YG
Sbjct: 61 FEVSVGWRRQY--------VGVKRLVLNGVSFYFIDNQHYFFRG-HVYG 100
>sp|P39125|GLGA_BACSU Glycogen synthase OS=Bacillus subtilis (strain 168) GN=glgA PE=2
SV=1
Length = 484
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M ++ +EC P+ K+GGL DVAGALPKALAR G+ V V+ P Y EP ++K+
Sbjct: 1 MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAE 60
Query: 338 VDRQDIEVAYFQAYI-------DGVDFVFLDSPLF 365
+ V + Q Y + V++ F+D+ +
Sbjct: 61 C---TVAVGWRQQYCGIEHMAENDVNYYFIDNEYY 92
>sp|Q8CWX0|GLGA_STRMU Glycogen synthase OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=glgA PE=3 SV=1
Length = 476
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 21/109 (19%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAEP--- 327
M ++ VAAE P++KTGGLGDV GALPK+L + + V V+ P+Y G+ E
Sbjct: 1 MKILFVAAEGAPFAKTGGLGDVIGALPKSLVKNNNEVSVILPYYDVVDAKFGDQIEDLFY 60
Query: 328 --QDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYG 374
+ G R+ Y V + DGVDF F+D+ + + G IYG
Sbjct: 61 FFTNVGWRREY--------VGIKHIFRDGVDFYFIDNKHYFYRG-QIYG 100
>sp|A5GT38|GLGA_SYNR3 Glycogen synthase OS=Synechococcus sp. (strain RCC307) GN=glgA PE=3
SV=1
Length = 507
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M ++ AAEC P K GG+GDV G+LP ALA GH V V+ P YG D +R
Sbjct: 1 MRILFAAAECAPMVKVGGMGDVVGSLPPALAELGHDVRVIMPGYGKLWSQLDVPSEPIWR 60
Query: 338 VDRQDIEVAYFQAY--IDGVDFVFLDSPLFRHLGNNIYGGGRE-VRNSFIDS 386
+ A ++ G+ + P+F G IYGG E R +F S
Sbjct: 61 AQTMGTDFAVYETRHPKTGLTIYLVGHPVFD--GERIYGGEDEDWRFTFFAS 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,035,099
Number of Sequences: 539616
Number of extensions: 6503937
Number of successful extensions: 22165
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 343
Number of HSP's that attempted gapping in prelim test: 20783
Number of HSP's gapped (non-prelim): 1329
length of query: 397
length of database: 191,569,459
effective HSP length: 120
effective length of query: 277
effective length of database: 126,815,539
effective search space: 35127904303
effective search space used: 35127904303
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)