Query 015972
Match_columns 397
No_of_seqs 290 out of 1406
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:43:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.1E-55 7.3E-60 437.5 25.3 328 51-395 6-379 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.2E-50 7.4E-55 401.1 29.1 317 52-395 8-366 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 2.4E-50 8.2E-55 397.9 24.9 319 53-395 2-353 (381)
4 2apr_A Rhizopuspepsin; hydrola 100.0 4.7E-50 1.6E-54 387.7 22.5 279 64-395 13-304 (325)
5 2x0b_A Renin; hydrolase-hormon 100.0 1.8E-50 6.1E-55 398.1 18.9 289 53-395 50-363 (383)
6 3psg_A Pepsinogen; hydrolase(a 100.0 4.8E-50 1.6E-54 393.9 19.3 291 53-395 45-350 (370)
7 1am5_A Pepsin, acid proteinase 100.0 3.2E-49 1.1E-53 381.6 23.2 286 54-394 2-303 (324)
8 1dpj_A Proteinase A; proteinas 100.0 2.4E-49 8.2E-54 383.3 21.8 287 55-395 4-309 (329)
9 3c9x_A Trichoderma reesei aspa 100.0 2.2E-49 7.4E-54 383.6 21.2 282 64-395 13-310 (329)
10 1tzs_A Cathepsin E; hydrolase, 100.0 3.5E-49 1.2E-53 385.5 22.4 290 52-394 11-321 (351)
11 1oew_A Endothiapepsin; hydrola 100.0 3.8E-49 1.3E-53 381.9 19.1 281 64-395 13-309 (329)
12 1mpp_A Pepsin; hydrolase(acid 100.0 2.2E-48 7.4E-53 381.3 24.2 296 51-395 5-335 (361)
13 1htr_B Gastricsin; aspartyl pr 100.0 3.4E-49 1.2E-53 382.2 17.7 285 56-395 5-309 (329)
14 3cms_A Chymosin B; hydrolase, 100.0 5.4E-49 1.9E-53 379.9 18.1 285 53-394 3-302 (323)
15 4aa9_A Chymosin; hydrolase, as 100.0 4.6E-49 1.6E-53 379.9 16.1 285 56-395 3-300 (320)
16 1j71_A Candidapepsin, aspartic 100.0 1.8E-48 6.3E-53 377.9 19.9 278 53-394 2-303 (334)
17 1miq_A Plasmepsin; aspartic pr 100.0 1.8E-48 6.2E-53 383.3 17.2 283 53-394 51-353 (375)
18 2qzx_A Candidapepsin-5; aspart 100.0 7.4E-48 2.5E-52 374.8 20.4 282 53-395 2-311 (342)
19 3k1w_A Renin; protease, altern 100.0 4.6E-48 1.6E-52 376.1 18.0 291 51-395 5-320 (341)
20 3fv3_A SAPP1P-secreted asparti 100.0 2.9E-47 9.8E-52 370.2 23.3 281 53-395 2-309 (339)
21 1ibq_A Aspergillopepsin; aspar 100.0 1.9E-47 6.5E-52 369.4 20.5 279 64-395 12-305 (325)
22 1izd_A Aspartic proteinase; su 100.0 9.5E-48 3.3E-52 371.1 17.0 277 65-395 14-303 (323)
23 3pvk_A Candidapepsin-2; hydrol 100.0 2.8E-47 9.5E-52 370.7 19.7 282 53-395 2-311 (342)
24 2bju_A Plasmepsin II; aspartic 100.0 2.4E-47 8.1E-52 382.2 17.4 284 53-394 127-429 (453)
25 1yg9_A Aspartic protease BLA G 100.0 2.5E-47 8.6E-52 369.3 16.5 286 53-395 6-309 (330)
26 1bxo_A Protein (penicillopepsi 100.0 1.7E-47 6E-52 369.3 15.2 275 65-395 14-303 (323)
27 1qdm_A Prophytepsin; aspartic 100.0 6.1E-47 2.1E-51 382.7 19.9 222 53-304 41-281 (478)
28 3qvc_A Histo-aspartic protease 100.0 8.2E-47 2.8E-51 378.7 16.3 283 53-394 126-428 (451)
29 2ewy_A Beta-secretase 2; BACE2 100.0 7.2E-46 2.4E-50 366.2 22.4 297 57-395 6-335 (383)
30 3lpj_A Beta-secretase 1; alzhe 100.0 1.2E-45 4.1E-50 372.4 23.5 293 65-395 73-400 (455)
31 2qp8_A Beta-secretase 1; BACE1 100.0 1.3E-45 4.6E-50 365.7 22.7 300 56-395 13-347 (395)
32 3vf3_A Beta-secretase 1; struc 100.0 9E-45 3.1E-49 360.6 26.0 293 65-395 27-354 (402)
33 1wkr_A Polyporopepsin; hydrola 100.0 5.3E-45 1.8E-49 354.4 21.2 276 55-395 4-313 (340)
34 1b5f_A Protein (cardosin A); h 100.0 2.3E-42 7.9E-47 319.5 17.1 219 55-303 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1E-29 3.5E-34 234.9 14.0 200 171-394 2-220 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.2E-21 4.2E-26 154.5 9.2 88 55-166 4-95 (97)
37 1b5f_B Protein (cardosin A); h 98.1 1.6E-06 5.3E-11 66.2 4.0 53 339-395 12-67 (87)
38 1fmb_A EIAV protease; hydrolas 84.4 1 3.4E-05 34.9 4.1 25 69-95 10-34 (104)
39 2hs1_A HIV-1 protease; ultra-h 84.1 1.1 3.7E-05 34.4 4.1 27 69-97 10-36 (99)
40 3liy_A Protease; hydrolase, hy 83.7 1 3.5E-05 35.2 3.8 29 69-97 12-43 (116)
41 3ec0_A Protease; HIV-2, inhibi 80.7 1.6 5.5E-05 33.3 3.9 27 69-97 10-36 (99)
42 2i1a_A DNA damage-inducible pr 79.0 1.7 5.8E-05 35.5 4.0 31 65-97 24-54 (148)
43 2hah_A Protease, retropepsin; 75.1 2.7 9.3E-05 33.1 3.9 24 72-97 18-41 (116)
44 3sqf_A Protease; folded monome 73.0 3.7 0.00013 32.1 4.1 27 69-97 11-37 (114)
45 2i1a_A DNA damage-inducible pr 71.9 4.4 0.00015 32.9 4.6 30 264-298 30-59 (148)
46 3s8i_A Protein DDI1 homolog 1; 69.1 4.6 0.00016 33.2 4.1 29 265-298 29-57 (148)
47 3s8i_A Protein DDI1 homolog 1; 68.8 4.1 0.00014 33.5 3.8 31 65-97 22-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 60.1 8.4 0.00029 31.0 3.9 28 68-97 23-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 56.5 9.6 0.00033 33.0 3.9 28 68-97 9-36 (203)
50 1lya_A Cathepsin D; lysosomal 56.3 13 0.00043 28.0 4.2 38 248-293 5-44 (97)
51 2rsp_A RSV protease; hydrolase 55.4 9.5 0.00033 30.3 3.4 22 74-97 27-48 (124)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 35.8 32 0.0011 29.7 3.9 27 69-97 114-140 (203)
53 1b5f_A Protein (cardosin A); h 35.2 42 0.0014 29.3 4.8 40 54-97 180-227 (239)
54 1mpp_A Pepsin; hydrolase(acid 34.3 46 0.0016 31.0 5.2 44 242-293 4-49 (361)
55 1bxo_A Protein (penicillopepsi 32.8 45 0.0015 30.6 4.8 42 243-294 4-45 (323)
56 3cms_A Chymosin B; hydrolase, 32.5 49 0.0017 30.3 5.0 42 244-293 2-45 (323)
57 1fmb_A EIAV protease; hydrolas 32.4 40 0.0014 25.7 3.6 34 257-295 5-38 (104)
58 3c9x_A Trichoderma reesei aspa 31.4 51 0.0017 30.3 4.9 42 53-97 183-230 (329)
59 2hs1_A HIV-1 protease; ultra-h 31.3 41 0.0014 25.4 3.4 31 257-292 5-35 (99)
60 1ibq_A Aspergillopepsin; aspar 30.8 46 0.0016 30.5 4.5 41 244-294 4-44 (325)
61 1izd_A Aspartic proteinase; su 30.6 51 0.0017 30.2 4.8 42 243-294 4-45 (323)
62 1lya_B Cathepsin D; lysosomal 28.6 47 0.0016 28.8 4.0 27 71-97 107-137 (241)
63 3ec0_A Protease; HIV-2, inhibi 27.0 53 0.0018 24.8 3.4 29 257-290 5-33 (99)
64 2hah_A Protease, retropepsin; 26.8 54 0.0019 25.5 3.5 31 256-292 10-40 (116)
65 2apr_A Rhizopuspepsin; hydrola 25.1 82 0.0028 28.7 5.1 42 53-97 183-229 (325)
66 3slz_A GAG-Pro-POL polyprotein 24.9 56 0.0019 26.0 3.4 28 261-293 23-50 (132)
67 1oew_A Endothiapepsin; hydrola 24.0 1E+02 0.0036 28.1 5.7 42 53-97 182-229 (329)
68 1j71_A Candidapepsin, aspartic 23.0 79 0.0027 29.0 4.6 37 248-293 5-43 (334)
69 1t6e_X Xylanase inhibitor; two 22.9 55 0.0019 30.8 3.5 34 248-292 5-39 (381)
70 3fv3_A SAPP1P-secreted asparti 22.8 80 0.0027 28.9 4.6 38 247-293 4-43 (339)
71 1wkr_A Polyporopepsin; hydrola 22.5 89 0.003 28.7 4.9 36 248-292 5-42 (340)
72 1qdm_A Prophytepsin; aspartic 21.0 94 0.0032 30.4 4.9 53 339-395 402-458 (478)
73 3aup_A SBG7S, BG, basic 7S glo 20.9 93 0.0032 29.4 4.7 41 247-293 11-52 (403)
74 1yg9_A Aspartic protease BLA G 20.7 67 0.0023 29.5 3.6 30 256-293 17-46 (330)
75 2qzx_A Candidapepsin-5; aspart 20.0 1.2E+02 0.0042 27.7 5.3 37 248-293 5-43 (342)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.1e-55 Score=437.49 Aligned_cols=328 Identities=22% Similarity=0.364 Sum_probs=258.6
Q ss_pred CCceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 015972 51 CSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (397)
Q Consensus 51 ~~~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~ 130 (397)
++++.+|++++. .+++|+++|+||||||++.|+|||||+++||+|. +|. ....|. .++|.++.|.....
T Consensus 6 ~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~----~v~C~s~~C~~~~~ 74 (413)
T 3vla_A 6 PSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYR----PVRCRTSQCSLSGS 74 (413)
T ss_dssp CSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCE----ECBTTSHHHHHTTC
T ss_pred CccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcC----ccCCCccccccccc
Confidence 577889999875 6899999999999999999999999999999998 652 112232 38999999987654
Q ss_pred CCCC--------CCCCCCCCcceeee-CCCCeEEEEEEEEEEEeeccCCC-----cCCCceEEEeeEecCCCCCCCCccE
Q 015972 131 PGHH--------NCEDPAQCDYELEY-ADGGSSLGVLVKDAFAFNYTNGQ-----RLNPRLALGCGYNQVPGASYHPLDG 196 (397)
Q Consensus 131 ~~~~--------~c~~~~~~~~~i~Y-g~Gs~~~G~~~~D~v~~~~~~g~-----~~~~~~~Fg~~~~~~~~~~~~~~~G 196 (397)
..+. .|. .+.|.|.+.| ++|+.+.|.+++|+|+|+..+|. ..++++.|||++.+.........+|
T Consensus 75 ~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dG 153 (413)
T 3vla_A 75 IACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVG 153 (413)
T ss_dssp CEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCE
T ss_pred CCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccccccc
Confidence 3222 333 3579999999 58889999999999999865543 4678899999988521112456899
Q ss_pred EEecCCCCCChhhhhhcccccceeeEEeecC--CCceeEEeCCCCC-------CCCC-cEEeecccCCC-----------
Q 015972 197 ILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY-------DSSR-VVWTSMSSDYT----------- 255 (397)
Q Consensus 197 IlGLg~~~~s~~~ql~~~~~i~~~Fs~~l~~--~~~G~l~fG~~~~-------~~g~-~~~~pl~~~~~----------- 255 (397)
|||||++.+|++.||.++++++++||+||.+ +.+|.|+||+.+. +.++ +.|+||..++.
T Consensus 154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~ 233 (413)
T 3vla_A 154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP 233 (413)
T ss_dssp EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCC
T ss_pred ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCC
Confidence 9999999999999999998889999999986 4689999999863 3567 99999998731
Q ss_pred -CceeEEeeEEEECCeEeecC----------CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCccc
Q 015972 256 -KYYSPGVAELFFGGETTGLK----------NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCW 324 (397)
Q Consensus 256 -~~y~v~l~~i~v~g~~~~~~----------~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~ 324 (397)
.||+|.+++|+|+++.+.+. .+.+||||||++++||+++|++|+++|.+++...++++......++.|+
T Consensus 234 ~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~ 313 (413)
T 3vla_A 234 SVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACF 313 (413)
T ss_dssp CCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEE
T ss_pred CceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCccee
Confidence 59999999999999998754 3689999999999999999999999999887532333332234567899
Q ss_pred ccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCCCcEEEEEEeCCcCCCCCeeEEccccc
Q 015972 325 KGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 325 ~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~~~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
+.+.... ..+...+|+|+|+|+|+ +++|+|++++|+++..++..|++++..... .+..|||||++.
T Consensus 314 ~~~~~~~--~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~-~~~~~IlGd~fl 379 (413)
T 3vla_A 314 STDNILS--TRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGSN-LRTSIVIGGHQL 379 (413)
T ss_dssp ECTTCCE--ETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEESS-CSSSEEECHHHH
T ss_pred ccCCccc--cccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCCC-cccceeEehhhh
Confidence 8653100 01123589999999962 389999999999987667899998876532 235899999875
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.2e-50 Score=401.06 Aligned_cols=317 Identities=18% Similarity=0.339 Sum_probs=242.6
Q ss_pred CceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 015972 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (397)
Q Consensus 52 ~~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~ 131 (397)
+.+.+||+++. .+++|+++|.||||||++.|+|||||+++||+|. +| . ....|. .++|.++.|...+.+
T Consensus 8 ~~~~~pl~~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~---~--~Sst~~----~~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 8 NLVVLPVQNDG-STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQ---Y--SSKTYQ----APFCHSTQCSRANTH 76 (403)
T ss_dssp CCEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SC---C--CCSSCB----CCCTTBHHHHHTTCC
T ss_pred ccEEEeeecCC-CCceEEEEEECCCCCceeEEEEECCCCceeECCC-CC---C--CCCCCC----ccCCCCccccCcccc
Confidence 45679998653 5889999999999999999999999999999998 55 2 122233 378999999876543
Q ss_pred C--------CCCCCCCCCCcceeeeC-CCCeEEEEEEEEEEEeeccCCC-------cCCCceEEEeeEecCCC-CCCCCc
Q 015972 132 G--------HHNCEDPAQCDYELEYA-DGGSSLGVLVKDAFAFNYTNGQ-------RLNPRLALGCGYNQVPG-ASYHPL 194 (397)
Q Consensus 132 ~--------~~~c~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~~~~~g~-------~~~~~~~Fg~~~~~~~~-~~~~~~ 194 (397)
. ...|. ...|.|.+.|+ +|+.+.|.+++|+|+|+..+|. ..++++.|||++..... +.....
T Consensus 77 ~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 77 QCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred CccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 1 12343 25799999998 7889999999999999864432 46788999999886322 334678
Q ss_pred cEEEecCCCCCChhhhhhcccccceeeEEeecC--CCceeEEeCCCCC--C--C-C-----CcEEeecccCCCCceeEEe
Q 015972 195 DGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY--D--S-S-----RVVWTSMSSDYTKYYSPGV 262 (397)
Q Consensus 195 ~GIlGLg~~~~s~~~ql~~~~~i~~~Fs~~l~~--~~~G~l~fG~~~~--~--~-g-----~~~~~pl~~~~~~~y~v~l 262 (397)
+||||||++.++++.||++..+.+++||+||.+ ..+|.|+||+ ++ + . | ++.|+|+...+..||.|.+
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 999999999999999997544348999999986 5689999999 53 3 3 4 9999999987436999999
Q ss_pred eEEEECCeEe-ecC----------CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCc
Q 015972 263 AELFFGGETT-GLK----------NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFK 331 (397)
Q Consensus 263 ~~i~v~g~~~-~~~----------~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 331 (397)
++|+|+++.+ .+. .+.+||||||++++||+++|++|+++|.+++.. +.++.....+..|+..+.
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~c~~c~~--- 309 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSVAPFGLCFNSNK--- 309 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECCCTTCSCEECGGG---
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCCCCCCCceEECCC---
Confidence 9999999887 542 235999999999999999999999999877643 122111123345776431
Q ss_pred ccccccccccEEEEEEecCCCC--eEEEECCCeeEEEeCCCcEEEEEEeCCcCCCCCeeEEccccc
Q 015972 332 NVHDVKKCFRTLALSFTDGKTR--TLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 332 ~~~~~~~~~P~i~f~f~g~~~~--~~~~l~p~~yi~~~~~~~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
+ ..+|+|+|+|+| + ++|+|++++|+++..++..|++|...... ..+.||||+++.
T Consensus 310 ----~-~~~P~i~f~f~g---~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~-~~~~~ILG~~fl 366 (403)
T 3aup_A 310 ----I-NAYPSVDLVMDK---PNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQ-PRAEITLGARQL 366 (403)
T ss_dssp ----C-CCCCCEEEEESS---TTCCEEEECHHHHEEEC---CEEECEEECCSC-CSSSEEECHHHH
T ss_pred ----c-CcCCcEEEEEcC---CCceEEEEcccceEEEcCCCeEEEEEEcCCCC-CCCcEEEChHHh
Confidence 2 258999999998 4 69999999999987656799988876532 135799999864
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.4e-50 Score=397.89 Aligned_cols=319 Identities=19% Similarity=0.326 Sum_probs=241.0
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~ 132 (397)
++.+||+.+ +.+.+|+++|+|||| |+|||||+++||+|. +|. .|. .++|.++.|...+...
T Consensus 2 ~~~~pv~~~-~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~--------~~~----~~~C~s~~C~~~~~~~ 62 (381)
T 1t6e_X 2 PVLAPVTKD-PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ--------PPA----EIPCSSPTCLLANAYP 62 (381)
T ss_dssp CEEEEEEEC-TTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC--------CCC----CCBTTSHHHHHHHSSC
T ss_pred ceEEeEEec-CCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC--------CCC----ccCCCCchhccccCCC
Confidence 457888754 358899999999998 999999999999997 552 122 3788888887654332
Q ss_pred CCCCCC--------CCCC-cceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCce----EEEeeEecCCCCCCCCccEEEe
Q 015972 133 HHNCED--------PAQC-DYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRL----ALGCGYNQVPGASYHPLDGILG 199 (397)
Q Consensus 133 ~~~c~~--------~~~~-~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~----~Fg~~~~~~~~~~~~~~~GIlG 199 (397)
..+|.. ...| .|.++|++|+.+.|.+++|+|+|+..+|+..++++ .|||++.+.........+||||
T Consensus 63 ~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlG 142 (381)
T 1t6e_X 63 APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAG 142 (381)
T ss_dssp CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEE
T ss_pred CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEE
Confidence 335542 2456 59999999988899999999999865444445554 6799987521112467899999
Q ss_pred cCCCCCChhhhhhcccccceeeEEeecCCCceeEEeCCCCC----CCCCcEEeecccCCC-CceeEEeeEEEECCeEeec
Q 015972 200 LGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLY----DSSRVVWTSMSSDYT-KYYSPGVAELFFGGETTGL 274 (397)
Q Consensus 200 Lg~~~~s~~~ql~~~~~i~~~Fs~~l~~~~~G~l~fG~~~~----~~g~~~~~pl~~~~~-~~y~v~l~~i~v~g~~~~~ 274 (397)
||++.++++.||.++++++++||+||.+..+|+|+||+.+. +.+++.|+|+..++. .+|.|.+++|+|+++.+.+
T Consensus 143 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 143 LANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPV 222 (381)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCC
T ss_pred eCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecC
Confidence 99999999999999986799999999976789999999764 368999999997632 4677999999999998865
Q ss_pred C-----CCCEEEcCCCcceecCHHHHHHHHHHHHHHhcc-----CCCccC-CCCCCCCcccccccCCcccccccccccEE
Q 015972 275 K-----NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSA-----KSLKEA-PEDETLPLCWKGRRPFKNVHDVKKCFRTL 343 (397)
Q Consensus 275 ~-----~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~-~~~~~~~~C~~~~~~~~~~~~~~~~~P~i 343 (397)
. .+.+||||||++++||+++|++|+++|.+++.. ..+.+. .....++.|++.+.... ......+|+|
T Consensus 223 ~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~P~i 300 (381)
T 1t6e_X 223 PEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN--NLGGYAVPNV 300 (381)
T ss_dssp CTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCE--ETTEECCCCE
T ss_pred CHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcc--cccCCcCCeE
Confidence 4 257999999999999999999999999887642 122222 12234578997542100 0011358999
Q ss_pred EEEEecCCCCeEEEECCCeeEEEeCCCcEEEEEEeCCcC----CCCCeeEEccccc
Q 015972 344 ALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEV----GLQDLNVIGGIGD 395 (397)
Q Consensus 344 ~f~f~g~~~~~~~~l~p~~yi~~~~~~~~C~~~~~~~~~----~~~~~~IlGdv~~ 395 (397)
+|+|+| +++|+|++++|+++..++..|+++...... ...+.|||||++.
T Consensus 301 ~f~f~g---g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl 353 (381)
T 1t6e_X 301 QLGLDG---GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQM 353 (381)
T ss_dssp EEEETT---SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHH
T ss_pred EEEECC---CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHh
Confidence 999986 599999999999987667799998876531 1125799999864
No 4
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=4.7e-50 Score=387.66 Aligned_cols=279 Identities=22% Similarity=0.354 Sum_probs=228.1
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCc
Q 015972 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (397)
Q Consensus 64 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~ 143 (397)
.+.+|+++|+||||+|++.|+|||||+++||+|. +|..| .+.++.|+|++|+ +++. ..|.
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss------T~~~------------~~~~ 72 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS------TYQA------------DGRT 72 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT------TCEE------------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC------Ceee------------CCCE
Confidence 4779999999999999999999999999999999 99999 6778999998884 1211 3679
Q ss_pred ceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCCCCCCccEEEecCCCCC-------Chhhhhhcccc
Q 015972 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKS-------SIVSQLHSQKL 216 (397)
Q Consensus 144 ~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~ql~~~~~ 216 (397)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++..+..+.....+||||||+..+ +++++|+++|+
T Consensus 73 ~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~ 148 (325)
T 2apr_A 73 WSISYGDGSSASGILAKDNVNLG----GLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGL 148 (325)
T ss_dssp EEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTS
T ss_pred EEEEECCCCCEEEEEEEEEEEEC----CEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCC
Confidence 99999999889999999999995 56788999999998643333345899999998754 47889999998
Q ss_pred c-ceeeEEeecC---CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceec
Q 015972 217 I-RNVVGHCLSG---GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 290 (397)
Q Consensus 217 i-~~~Fs~~l~~---~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~l 290 (397)
| +++||+||.+ ...|.|+||++++ +.|++.|+|+.... .||.|.+++|+|++ .+...+..+||||||++++|
T Consensus 149 i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~~~l 226 (325)
T 2apr_A 149 ISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSR-GWWGITVDRATVGT-STVASSFDGILDTGTTLLIL 226 (325)
T ss_dssp CSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTT-SSCEEEECEEEETT-EEEECCEEEEECTTCSSEEE
T ss_pred CCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCC-CEEEEEEeEEEECC-EecCCCceEEEecCCccEEC
Confidence 9 8999999953 4689999999864 57999999998544 79999999999999 44445678999999999999
Q ss_pred CHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCCC
Q 015972 291 NRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKG 370 (397)
Q Consensus 291 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~~ 370 (397)
|+++|+++++++.+++... ..+..+|+.. .+|+|+|+|+| .+++||+++|++... +
T Consensus 227 P~~~~~~~~~~~~~~~~~~-------g~~~~~C~~~------------~~p~i~f~f~g----~~~~ip~~~~~~~~~-~ 282 (325)
T 2apr_A 227 PNNIAASVARAYGASDNGD-------GTYTISCDTS------------AFKPLVFSING----ASFQVSPDSLVFEEF-Q 282 (325)
T ss_dssp EHHHHHHHHHHHTCEECSS-------SCEEECSCGG------------GCCCEEEEETT----EEEEECGGGGEEEEE-T
T ss_pred CHHHHHHHHHHHhcccCCC-------CeEEEECCCC------------CCCcEEEEECC----EEEEECHHHEEEcCC-C
Confidence 9999999999987654421 1122358641 37999999997 699999999998754 6
Q ss_pred cEEEEEEeCCcCCCCCeeEEccccc
Q 015972 371 NVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 371 ~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
..|++.+.... .+.||||+++.
T Consensus 283 ~~C~~~i~~~~---~~~~iLG~~fl 304 (325)
T 2apr_A 283 GQCIAGFGYGN---WGFAIIGDTFL 304 (325)
T ss_dssp TEEEESEEEES---SSSEEECHHHH
T ss_pred CeEEEEEEcCC---CCCEEECHHHh
Confidence 78997544322 34799999863
No 5
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.8e-50 Score=398.12 Aligned_cols=289 Identities=17% Similarity=0.250 Sum_probs=232.8
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC----CCCCCCCCCCCCCCCCCCCCCcccccc
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASL 128 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~----~C~~~~~~~f~p~~S~~~C~s~~C~~~ 128 (397)
....||.+ +.+.+|+++|+||||||+|.|+|||||+++||+|. .|. .|. .|+.|||++|+ +++
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~--~~~~y~~~~Ss------T~~-- 116 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------SYK-- 116 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHH--TSCCBCGGGCT------TCE--
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCccccc--CCCCCCCCCCC------cEE--
Confidence 45588874 35789999999999999999999999999999999 896 587 46899999884 222
Q ss_pred CCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCCC-
Q 015972 129 HAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS- 206 (397)
Q Consensus 129 ~~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s- 206 (397)
..+|.|.+.|++| ++.|.+++|+|+|+ +..++ +.|||++.+.+. +.....+||||||++.++
T Consensus 117 ----------~~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 117 ----------HNGTELTLRYSTG-TVSGFLSQDIITVG----GITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp ----------EEEEEEEEECSSC-EEEEEEEEEEEEET----TEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCG
T ss_pred ----------ECCcEEEEEcCCc-cEEEEEEeeEEEEc----CceEE-EEEEEEEecCCcccccCCCceEeccCCCcccc
Confidence 1367999999999 59999999999995 56677 999999986332 345678999999998654
Q ss_pred -----hhhhhhccccc-ceeeEEeecCC------CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEe
Q 015972 207 -----IVSQLHSQKLI-RNVVGHCLSGG------GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETT 272 (397)
Q Consensus 207 -----~~~ql~~~~~i-~~~Fs~~l~~~------~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~ 272 (397)
++.+|.+|++| +++||+||.+. .+|+|+|||+++ +.|++.|+|+... .||+|.+++|.|+++.+
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~--~~w~v~l~~i~v~~~~~ 258 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSSTL 258 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST--TSCEEEECEEEESSCCC
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC--ceEEEEEeEEEeCCceE
Confidence 67889999999 89999999853 389999999875 4789999999876 69999999999999875
Q ss_pred ec-CCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCC
Q 015972 273 GL-KNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGK 351 (397)
Q Consensus 273 ~~-~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~ 351 (397)
.. .+..+||||||+++++|++++++|.+++.+.. . ...+..+|+... .+|+|+|+|+|
T Consensus 259 ~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-------~-~g~~~v~C~~~~-----------~~P~i~f~~~g-- 317 (383)
T 2x0b_A 259 LCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-------R-LFDYVVKCNEGP-----------TLPDISFHLGG-- 317 (383)
T ss_dssp BSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-------C-SSCEEEEGGGTT-----------TCCCEEEEETT--
T ss_pred EcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-------c-CCcEEEeccccc-----------cCceEEEEECC--
Confidence 33 35689999999999999999999999885432 1 122334698643 48999999987
Q ss_pred CCeEEEECCCeeEEEeCC--CcEEE-EEEeCCcC-CCCCeeEEccccc
Q 015972 352 TRTLFELTPEAYLIISNK--GNVCL-GILNGAEV-GLQDLNVIGGIGD 395 (397)
Q Consensus 352 ~~~~~~l~p~~yi~~~~~--~~~C~-~~~~~~~~-~~~~~~IlGdv~~ 395 (397)
++|+|+|++|+++..+ +..|+ ++...... ..++.|||||++.
T Consensus 318 --~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl 363 (383)
T 2x0b_A 318 --KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFI 363 (383)
T ss_dssp --EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHH
T ss_pred --EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHh
Confidence 9999999999987643 45899 57654321 1245899999863
No 6
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.8e-50 Score=393.93 Aligned_cols=291 Identities=19% Similarity=0.319 Sum_probs=232.9
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~ 132 (397)
....||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|..|..+.++.|||++|+ +++
T Consensus 45 ~~~~~l~n--~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~Ss------T~~------ 109 (370)
T 3psg_A 45 IGDEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS------TFE------ 109 (370)
T ss_dssp SCCCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT------TCE------
T ss_pred cceeccee--ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCc------CcE------
Confidence 44567763 35889999999999999999999999999999999 9986555578999999884 111
Q ss_pred CCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCC------
Q 015972 133 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------ 205 (397)
Q Consensus 133 ~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~------ 205 (397)
...|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++.+
T Consensus 110 ------~~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~ 178 (370)
T 3psg_A 110 ------ATSQELSITYGTG-SMTGILGYDTVQVG----GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGAT 178 (370)
T ss_dssp ------EEEEEEEEESSSC-EEEEEEEEEEEEET----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCC
T ss_pred ------ECCcEEEEEeCCc-eEEEEEEEEEEeeC----CcccCCeEEEEEEeecccccccCCccceeccCCccccccCCC
Confidence 1357899999999 59999999999995 577889999999886432 44566899999999764
Q ss_pred Chhhhhhccccc-ceeeEEeecCC--CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeec-CCCCE
Q 015972 206 SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL-KNLPV 279 (397)
Q Consensus 206 s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~-~~~~~ 279 (397)
+++.+|.++|+| +++||+||.+. .+|.|+|||+++ +.|++.|+|+... .||+|.+++|+++++.+.. .+..+
T Consensus 179 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~~~~~a 256 (370)
T 3psg_A 179 PVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE--GYWQITLDSITMDGETIACSGGCQA 256 (370)
T ss_dssp CHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE--TTEEEEECEEESSSSEEECTTCEEE
T ss_pred CHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc--ceeEEEEeEEEECCEEEecCCCceE
Confidence 477889999999 89999999963 589999999874 6899999999987 6999999999999988765 35689
Q ss_pred EEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEEC
Q 015972 280 VFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELT 359 (397)
Q Consensus 280 iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~ 359 (397)
||||||+++++|++++++|.+++.+... . ...+..+|.... .+|+|+|+|+| ++++|+
T Consensus 257 iiDTGTs~~~lP~~~~~~i~~~i~a~~~------~-~g~~~v~C~~~~-----------~lP~i~f~~~g----~~~~l~ 314 (370)
T 3psg_A 257 IVDTGTSLLTGPTSAIANIQSDIGASEN------S-DGEMVISCSSID-----------SLPDIVFTIDG----VQYPLS 314 (370)
T ss_dssp EECTTCCSEEEEHHHHHHHHHHTTCEEC------T-TCCEECCGGGGG-----------GCCCEEEEETT----EEEEEC
T ss_pred EEcCCCCcEECCHHHHHHHHHHhCCccc------C-CCcEEEECCCcc-----------cCCcEEEEECC----EEEEEC
Confidence 9999999999999999999988854321 1 122334687642 48999999987 999999
Q ss_pred CCeeEEEeCCCcEEEE-EEeCCcC-CCCCeeEEccccc
Q 015972 360 PEAYLIISNKGNVCLG-ILNGAEV-GLQDLNVIGGIGD 395 (397)
Q Consensus 360 p~~yi~~~~~~~~C~~-~~~~~~~-~~~~~~IlGdv~~ 395 (397)
+++|+++ . +..|+. +...... ..+..||||+++.
T Consensus 315 ~~~yi~~-~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl 350 (370)
T 3psg_A 315 PSAYILQ-D-DDSCTSGFEGMDVPTSSGELWILGDVFI 350 (370)
T ss_dssp HHHHEEE-C-SSCEEESEEEECCCTTSCCEEEECHHHH
T ss_pred HHHhccc-C-CCEEEEEEEeCCCCCCCCCcEEeChHHh
Confidence 9999998 3 346985 5443211 1234799999863
No 7
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-49 Score=381.64 Aligned_cols=286 Identities=20% Similarity=0.377 Sum_probs=232.3
Q ss_pred eeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 015972 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (397)
Q Consensus 54 ~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~ 131 (397)
+.+||++ +.+.+|+++|.||||||++.|+|||||+++||+|. .|. .|. .++.|||++|+ +++.
T Consensus 2 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~---- 66 (324)
T 1am5_A 2 VTEQMKN--EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQSS------TYVE---- 66 (324)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGCT------TCEE----
T ss_pred ceeeeec--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccCC------CeEe----
Confidence 3478874 34789999999999999999999999999999999 897 476 46899998884 1221
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCC-----
Q 015972 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS----- 205 (397)
Q Consensus 132 ~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~----- 205 (397)
..|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...
T Consensus 67 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 67 --------TGKTVDLTYGTG-GMRGILGQDTVSVG----GGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEESS----SSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGC
T ss_pred --------CCcEEEEEECCC-CeEEEEEECceeEC----CcEEcccEEEEEEecccccccCCCCceEEecCCccccccCC
Confidence 357999999999 56999999999995 567789999999987442 44567899999999864
Q ss_pred -Chhhhhhccccc-ceeeEEeecCC--CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCE
Q 015972 206 -SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPV 279 (397)
Q Consensus 206 -s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~ 279 (397)
+++.+|.++++| +++||+||.+. ..|.|+||++++ +.|++.|+|+... .||.|.+++|+|+++.+......+
T Consensus 134 ~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~a 211 (324)
T 1am5_A 134 VPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE--KYWQVALDGITVNGQTAACEGCQA 211 (324)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE--TTEEEEECEEEETTEECCCCCEEE
T ss_pred CchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC--cEEEEEEeEEEECCceeeccCceE
Confidence 477889999999 99999999864 489999999874 5799999999876 699999999999998764334789
Q ss_pred EEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEEC
Q 015972 280 VFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELT 359 (397)
Q Consensus 280 iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~ 359 (397)
||||||++++||++++++|.+++.+. . . ...+..+|+... .+|+|+|+|+| ++++|+
T Consensus 212 iiDSGTt~~~lp~~~~~~l~~~~~~~-~------~-~g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~i~ 268 (324)
T 1am5_A 212 IVDTGTSKIVAPVSALANIMKDIGAS-E------N-QGEMMGNCASVQ-----------SLPDITFTING----VKQPLP 268 (324)
T ss_dssp EECTTCSSEEECTTTHHHHHHHHTCE-E------C-CCCEECCTTSSS-----------SSCCEEEEETT----EEEEEC
T ss_pred EEecCCccEECCHHHHHHHHHHhCCc-c------c-CCcEEEeCCCcc-----------cCCcEEEEECC----EEEEEC
Confidence 99999999999999999999988654 2 1 122335697642 48999999986 999999
Q ss_pred CCeeEEEeCCCcEEE-EEEeCCcC-CCCCeeEEcccc
Q 015972 360 PEAYLIISNKGNVCL-GILNGAEV-GLQDLNVIGGIG 394 (397)
Q Consensus 360 p~~yi~~~~~~~~C~-~~~~~~~~-~~~~~~IlGdv~ 394 (397)
+++|+++. +..|+ ++...... ...+.||||+++
T Consensus 269 ~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~f 303 (324)
T 1am5_A 269 PSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVF 303 (324)
T ss_dssp HHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHH
T ss_pred HHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHH
Confidence 99999986 56899 56654321 124589999975
No 8
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.4e-49 Score=383.35 Aligned_cols=287 Identities=19% Similarity=0.306 Sum_probs=231.2
Q ss_pred eEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCC--CCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 015972 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVR--CVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (397)
Q Consensus 55 ~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~--C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~ 132 (397)
.+||.. +.+.+|+++|+||||||++.|+|||||+++||+|. +|.. |. .++.|||++|+ +++
T Consensus 4 ~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~------ 66 (329)
T 1dpj_A 4 DVPLTN--YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACF--LHSKYDHEASS------SYK------ 66 (329)
T ss_dssp EEECEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCE------
T ss_pred ceeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccC--CcCcCCcccCc------CeE------
Confidence 467764 24789999999999999999999999999999999 8986 65 46889998884 111
Q ss_pred CCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCC-CCCCCCccEEEecCCCCCC-----
Q 015972 133 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP-GASYHPLDGILGLGKGKSS----- 206 (397)
Q Consensus 133 ~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~-~~~~~~~~GIlGLg~~~~s----- 206 (397)
...|.|.+.|++| .+.|.+++|+|+|+ +..++++.|||++.... .+.....+||||||+..++
T Consensus 67 ------~~~~~~~i~Yg~G-s~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 67 ------ANGTEFAIQYGTG-SLEGYISQDTLSIG----DLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp ------EEEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCC
T ss_pred ------ECCcEEEEEECCc-eEEEEEEEEEEEEC----CeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCC
Confidence 1367999999999 89999999999995 56788999999998643 2334568999999998754
Q ss_pred -hhhhhhccccc-ceeeEEeecCC-----CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCC
Q 015972 207 -IVSQLHSQKLI-RNVVGHCLSGG-----GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 277 (397)
Q Consensus 207 -~~~ql~~~~~i-~~~Fs~~l~~~-----~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~ 277 (397)
++.+|.++++| +++||+||.+. .+|.|+||+++. +.+++.|+|+... .||.|.+++|+|+++.+...+.
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~ 213 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK--AYWEVKFEGIGLGDEYAELESH 213 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEECSSC
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC--ceEEEEeeeEEECCeEecCCCc
Confidence 45788999999 89999999753 379999999874 5689999999876 6999999999999998876678
Q ss_pred CEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEE
Q 015972 278 PVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFE 357 (397)
Q Consensus 278 ~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 357 (397)
.+||||||++++||++++++|.+++.+... . ...+..+|+.. ..+|+|+|+|+| ++++
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~-----------~~~P~i~f~f~g----~~~~ 271 (329)
T 1dpj_A 214 GAAIDTGTSLITLPSGLAEMINAEIGAKKG------W-TGQYTLDCNTR-----------DNLPDLIFNFNG----YNFT 271 (329)
T ss_dssp EEEECTTCSCEEECHHHHHHHHHHHTCEEC------T-TSSEEECGGGG-----------GGCCCEEEEETT----EEEE
T ss_pred cEEeeCCCCcEECCHHHHHHHHHHhCCccC------C-CCeEEEECCCC-----------CcCCcEEEEECC----EEEE
Confidence 999999999999999999999998854311 1 11122357653 248999999987 9999
Q ss_pred ECCCeeEEEeCCCcEEE-EEEeCCcC-CCCCeeEEccccc
Q 015972 358 LTPEAYLIISNKGNVCL-GILNGAEV-GLQDLNVIGGIGD 395 (397)
Q Consensus 358 l~p~~yi~~~~~~~~C~-~~~~~~~~-~~~~~~IlGdv~~ 395 (397)
|++++|+++.. ..|+ ++...... ..++.||||+++.
T Consensus 272 i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl 309 (329)
T 1dpj_A 272 IGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFL 309 (329)
T ss_dssp ECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHH
T ss_pred ECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHh
Confidence 99999999764 5899 56554211 1245899999863
No 9
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.2e-49 Score=383.62 Aligned_cols=282 Identities=16% Similarity=0.266 Sum_probs=226.4
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCc
Q 015972 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (397)
Q Consensus 64 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~ 143 (397)
.+.+|+++|+||||+|++.|+|||||+++||+|. +|..|..+.++.|||++|+ +|+.+ +.|.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss------T~~~~-----------~~~~ 74 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS------TSKKV-----------SGAS 74 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT------TCEEC-----------TTCB
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc------CceEc-----------CCCe
Confidence 4778999999999999999999999999999999 9998877778999999884 22221 3579
Q ss_pred ceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCC-CCCCccEEEecCCCCCC---------hhhhhhc
Q 015972 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHS 213 (397)
Q Consensus 144 ~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~s---------~~~ql~~ 213 (397)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++..+..+ .....+||||||+...+ ++++|.+
T Consensus 75 ~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 150 (329)
T 3c9x_A 75 WSISYGDGSSSSGDVYTDKVTIG----GFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAAS 150 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHT
T ss_pred EEEEeCCCCcEEEEEEEEEEEEC----CEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHH
Confidence 99999999879999999999995 5678899999999863321 12468999999997543 6677877
Q ss_pred cccc-ceeeEEeecCCCceeEEeCCCC--CCCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceec
Q 015972 214 QKLI-RNVVGHCLSGGGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 290 (397)
Q Consensus 214 ~~~i-~~~Fs~~l~~~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~l 290 (397)
+ | +++||+||.++..|.|+||+++ ++.|++.|+|+.... .||.|.+++|+|+++.+...+..+||||||++++|
T Consensus 151 ~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~l 227 (329)
T 3c9x_A 151 S--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQ-GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLL 227 (329)
T ss_dssp T--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTT-SSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEE
T ss_pred h--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCC-ceEEEEEeeEEECCEeccCCCceEEEECCCCcEeC
Confidence 6 6 8999999998779999999986 467999999998544 79999999999999877655678999999999999
Q ss_pred CHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCC-
Q 015972 291 NRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK- 369 (397)
Q Consensus 291 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~- 369 (397)
|++++++|.+++..+.. ... ...+..+|+. .+|+|+|+|+| ++++||+++|++...+
T Consensus 228 p~~~~~~i~~~i~~a~~----~~~-~~~~~~~C~~-------------~~P~i~f~f~g----~~~~ip~~~~~~~~~~~ 285 (329)
T 3c9x_A 228 DDNVVDAYYANVQSAQY----DNQ-QEGVVFDCDE-------------DLPSFSFGVGS----STITIPGDLLNLTPLEE 285 (329)
T ss_dssp CHHHHHHHHTTCTTCEE----ETT-TTEEEEETTC-------------CCCCEEEEETT----EEEEECGGGGEEEESST
T ss_pred CHHHHHHHHHhCCCcEE----cCC-CCEEEEECCC-------------CCCcEEEEECC----EEEEECHHHeeeeccCC
Confidence 99999999887743221 111 1112235863 27999999986 9999999999987632
Q ss_pred -CcEEEE-EEeCCcCCCCCeeEEccccc
Q 015972 370 -GNVCLG-ILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 370 -~~~C~~-~~~~~~~~~~~~~IlGdv~~ 395 (397)
...|++ +.... ..+.||||+++.
T Consensus 286 ~~~~C~~~i~~~~---~~~~~ILG~~fl 310 (329)
T 3c9x_A 286 GSSTCFGGLQSSS---GIGINIFGDVAL 310 (329)
T ss_dssp TCSEEEESEEECT---TTTSEEECHHHH
T ss_pred CCCeEEEEEEcCC---CCCcEEEChHHh
Confidence 369997 55433 135799999863
No 10
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.5e-49 Score=385.50 Aligned_cols=290 Identities=19% Similarity=0.302 Sum_probs=229.6
Q ss_pred CceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCccccccC
Q 015972 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLH 129 (397)
Q Consensus 52 ~~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~C~s~~C~~~~ 129 (397)
....+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|. .++.|||++|+ +++
T Consensus 11 ~~~~~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~--- 76 (351)
T 1tzs_A 11 QSAKEPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS------TYS--- 76 (351)
T ss_dssp ---CCTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCB---
T ss_pred Cccceecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc------ceE---
Confidence 344577763 34779999999999999999999999999999999 997 676 46899998884 111
Q ss_pred CCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCCC--
Q 015972 130 APGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS-- 206 (397)
Q Consensus 130 ~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-- 206 (397)
...|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++...+. +.....+||||||++.++
T Consensus 77 ---------~~~~~~~i~Yg~G-s~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 77 ---------QPGQSFSIQYGTG-SLSGIIGADQVSVE----GLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp ---------CCSCEEEEESSSC-EEEEEEEEEEEEET----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGG
T ss_pred ---------ECCCEEEEEeCCC-CeEEEEEEeEEEEC----CeEECCeEEEEEEeccccccccCCCceEEecCCcccccc
Confidence 2468999999999 58999999999995 567889999999876332 334568999999998654
Q ss_pred ----hhhhhhccccc-ceeeEEeecCCC----ceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeec-
Q 015972 207 ----IVSQLHSQKLI-RNVVGHCLSGGG----GGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL- 274 (397)
Q Consensus 207 ----~~~ql~~~~~i-~~~Fs~~l~~~~----~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~- 274 (397)
++.+|.++++| +++||+||.+.. .|.|+|||++. +.|++.|+|+... .||.|.+++|+|+++.+..
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~ 220 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ--AYWQIALDNIQVGGTVMFCS 220 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE--TTEEEEEEEEEETTEEEECT
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC--ceEEEEeCEEEECCceEEcC
Confidence 77889999999 899999998642 79999999874 5799999999876 6999999999999988543
Q ss_pred CCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCe
Q 015972 275 KNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRT 354 (397)
Q Consensus 275 ~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~ 354 (397)
.+..+||||||++++||++++++|.+++.+... ...+..+|+... .+|+|+|+|+| +
T Consensus 221 ~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~g~~~~~C~~~~-----------~~P~i~f~f~g----~ 277 (351)
T 1tzs_A 221 EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV--------DGEYAVECANLN-----------VMPDVTFTING----V 277 (351)
T ss_dssp TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSSEEECGGGGG-----------GSCCEEEEETT----E
T ss_pred CCceEEeccCCcceeCCHHHHHHHHHHhCCccc--------CCeEEEeCCCCc-----------cCCcEEEEECC----E
Confidence 346899999999999999999999998854321 112234687642 48999999976 9
Q ss_pred EEEECCCeeEEEeCC--CcEEE-EEEeCCcC-CCCCeeEEcccc
Q 015972 355 LFELTPEAYLIISNK--GNVCL-GILNGAEV-GLQDLNVIGGIG 394 (397)
Q Consensus 355 ~~~l~p~~yi~~~~~--~~~C~-~~~~~~~~-~~~~~~IlGdv~ 394 (397)
+++|++++|+++... +..|+ ++...... +..+.||||+++
T Consensus 278 ~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~f 321 (351)
T 1tzs_A 278 PYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVF 321 (351)
T ss_dssp EEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHH
T ss_pred EEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHH
Confidence 999999999987542 35899 56654321 124589999975
No 11
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.8e-49 Score=381.92 Aligned_cols=281 Identities=18% Similarity=0.243 Sum_probs=223.6
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCc
Q 015972 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (397)
Q Consensus 64 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~ 143 (397)
.+.+|+++|.||||+|++.|+|||||+++||+|. +|..|.. .++.|||++|+ +++.+ +.|.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss------T~~~~-----------~~~~ 73 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST------TAKLL-----------SGAT 73 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT------TCEEE-----------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc------cceec-----------CCCe
Confidence 4678999999999999999999999999999999 9998876 68899999884 22211 2568
Q ss_pred ceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCC-CCCCccEEEecCCCCCC---------hhhhhhc
Q 015972 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHS 213 (397)
Q Consensus 144 ~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~s---------~~~ql~~ 213 (397)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++..+..+ .....+||||||+..++ ++++|.+
T Consensus 74 ~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 149 (329)
T 1oew_A 74 WSISYGDGSSSSGDVYTDTVSVG----GLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKA 149 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTT
T ss_pred EEEEeCCCCcEEEEEEEEEEEEC----CEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHH
Confidence 99999999779999999999995 5678899999999864321 12468999999997543 6678877
Q ss_pred cccc-ceeeEEeecCCCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceec
Q 015972 214 QKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 290 (397)
Q Consensus 214 ~~~i-~~~Fs~~l~~~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~l 290 (397)
+ | +++||+||.++..|.|+||++++ +.|++.|+|+.... .||.|.+++|+|+++.+...+..+||||||++++|
T Consensus 150 ~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~l 226 (329)
T 1oew_A 150 S--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQ-GFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYL 226 (329)
T ss_dssp T--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTT-SSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEE
T ss_pred h--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCC-ceEEEEEeeEEECCeeccCCCceEEEeCCCCCEEC
Confidence 6 6 89999999987799999999874 57999999998544 79999999999999876544578999999999999
Q ss_pred CHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCC-
Q 015972 291 NRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK- 369 (397)
Q Consensus 291 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~- 369 (397)
|++++++|.+++..+.. ... ...+..+|+. .+|+|+|+|+| ++++|++++|++...+
T Consensus 227 P~~~~~~l~~~i~~a~~----~~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~ip~~~~~~~~~~~ 284 (329)
T 1oew_A 227 PATVVSAYWAQVSGAKS----SSS-VGGYVFPCSA-------------TLPSFTFGVGS----ARIVIPGDYIDFGPIST 284 (329)
T ss_dssp CHHHHHHHHTTSTTCEE----ETT-TTEEEEETTC-------------CCCCEEEEETT----EEEEECHHHHEEEESST
T ss_pred CHHHHHHHHHhCCCcEE----cCC-CCEEEEECCC-------------CCCcEEEEECC----EEEEECHHHeeeeecCC
Confidence 99999999887743221 111 1112246873 27999999965 9999999999987532
Q ss_pred -CcEEEE-EEeCCcCCCCCeeEEccccc
Q 015972 370 -GNVCLG-ILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 370 -~~~C~~-~~~~~~~~~~~~~IlGdv~~ 395 (397)
...|++ +.... ..+.||||+++.
T Consensus 285 ~~~~C~~~i~~~~---~~~~~iLG~~fl 309 (329)
T 1oew_A 285 GSSSCFGGIQSSA---GIGINIFGDVAL 309 (329)
T ss_dssp TCSEEEESEEEST---TTSSEEECHHHH
T ss_pred CCCeEEEEEEeCC---CCCceEEChHHh
Confidence 368997 44433 135799999863
No 12
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.2e-48 Score=381.30 Aligned_cols=296 Identities=19% Similarity=0.298 Sum_probs=235.7
Q ss_pred CCceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC---CCCCCCCCCCCCCCCCCCCCCccccc
Q 015972 51 CSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICAS 127 (397)
Q Consensus 51 ~~~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~---~C~~~~~~~f~p~~S~~~C~s~~C~~ 127 (397)
++...+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|.. ++.|+|++|+ +++.
T Consensus 5 g~~~~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~ 73 (361)
T 1mpp_A 5 GSVDTPGLYD--FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCVG--KRFFDPSSSS------TFKE 73 (361)
T ss_dssp CCEEEEEEEE--TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCCS--SCCBCGGGCT------TCEE
T ss_pred CccceEEeec--CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCCC--CCcCCCccCC------ceEe
Confidence 4556688875 34789999999999999999999999999999999 998 6874 6899999884 1221
Q ss_pred cCCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCC------CCCCCCccEEEecC
Q 015972 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP------GASYHPLDGILGLG 201 (397)
Q Consensus 128 ~~~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~------~~~~~~~~GIlGLg 201 (397)
..|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++.... .+.....+||||||
T Consensus 74 ------------~~~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg 136 (361)
T 1mpp_A 74 ------------TDYNLNITYGTGG-ANGIYFRDSITVG----GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAA 136 (361)
T ss_dssp ------------EEEEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECS
T ss_pred ------------cCCeEEEEECCce-EEEEEEEEEEEEC----CEEEeceEEEEEEeccCccccccccccCCCCCEEEeC
Confidence 3579999999995 8999999999995 56788999999998744 24456789999999
Q ss_pred CCCC------------Chhhhhhccccc-ceeeEEeecCC-CceeEEeCCCCC--CCCCcEEeecccCCC--CceeEEee
Q 015972 202 KGKS------------SIVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDLY--DSSRVVWTSMSSDYT--KYYSPGVA 263 (397)
Q Consensus 202 ~~~~------------s~~~ql~~~~~i-~~~Fs~~l~~~-~~G~l~fG~~~~--~~g~~~~~pl~~~~~--~~y~v~l~ 263 (397)
++.+ +++.+|.++++| +++||+||.+. ..|.|+||++++ +.+++.|+|+..... .||.|.++
T Consensus 137 ~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~ 216 (361)
T 1mpp_A 137 YPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVT 216 (361)
T ss_dssp CGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEE
T ss_pred CcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEe
Confidence 8754 466789999999 89999999974 589999999864 579999999998742 29999999
Q ss_pred EEEECCeEeec-CCCCEE-EcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccc-
Q 015972 264 ELFFGGETTGL-KNLPVV-FDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCF- 340 (397)
Q Consensus 264 ~i~v~g~~~~~-~~~~~i-iDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~- 340 (397)
+|+|+++.+.. ....+| |||||++++||++++++|.+++.+... .. ...+..+|+... .+
T Consensus 217 ~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~~~-----------~~~ 279 (361)
T 1mpp_A 217 GVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES-QQGYTVPCSKYQ-----------DSK 279 (361)
T ss_dssp EEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE-TTEEEEEHHHHT-----------TCC
T ss_pred EEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CC-CCcEEEECCCcc-----------cCC
Confidence 99999988743 346899 999999999999999999999865432 11 122334687642 35
Q ss_pred cEEEEEE--ecC-CCCeEEEECCCeeEEEeCC-CcEEE-EEEeCCcCCCCCeeEEccccc
Q 015972 341 RTLALSF--TDG-KTRTLFELTPEAYLIISNK-GNVCL-GILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 341 P~i~f~f--~g~-~~~~~~~l~p~~yi~~~~~-~~~C~-~~~~~~~~~~~~~~IlGdv~~ 395 (397)
|+|+|+| ++. .++++++|++++|+++... +..|+ ++.... .+.||||+++.
T Consensus 280 p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~----~~~~iLG~~fl 335 (361)
T 1mpp_A 280 TTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG----GNQFIVGNLFL 335 (361)
T ss_dssp CEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES----SSCCEEEHHHH
T ss_pred CcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC----CCCEEEChHHh
Confidence 9999999 510 1138999999999998653 46898 666542 34799999763
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.4e-49 Score=382.24 Aligned_cols=285 Identities=21% Similarity=0.391 Sum_probs=228.9
Q ss_pred EeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCC--CCCCCCCCCCCCCCCCCCCCccccccCCCCC
Q 015972 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVR--CVEAPHPLYRPSNDLVPCEDPICASLHAPGH 133 (397)
Q Consensus 56 ~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~--C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~ 133 (397)
+||+ +.+.+|+++|.||||||++.|+|||||+++||+|. .|.. |. .++.|||++|+ +++.
T Consensus 5 ~~l~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~------ 66 (329)
T 1htr_B 5 EPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACT--SHSRFNPSESS------TYST------ 66 (329)
T ss_dssp CGGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCEE------
T ss_pred eeeE---EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccC--CCCcCCCccCC------CeEE------
Confidence 5665 34789999999999999999999999999999999 8974 76 46899998884 1221
Q ss_pred CCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCC------C
Q 015972 134 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------S 206 (397)
Q Consensus 134 ~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~------s 206 (397)
..|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+..+ +
T Consensus 67 ------~~~~~~i~Yg~g-s~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 135 (329)
T 1htr_B 67 ------NGQTFSLQYGSG-SLTGFFGYDTLTVQ----SIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATT 135 (329)
T ss_dssp ------EEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCS
T ss_pred ------CCcEEEEEeCCC-CeEEEEEeeeEEEc----ceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCC
Confidence 357999999999 56999999999995 567889999999876432 33456899999999865 4
Q ss_pred hhhhhhccccc-ceeeEEeecCCC---ceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEee--cCCCC
Q 015972 207 IVSQLHSQKLI-RNVVGHCLSGGG---GGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTG--LKNLP 278 (397)
Q Consensus 207 ~~~ql~~~~~i-~~~Fs~~l~~~~---~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~--~~~~~ 278 (397)
++.+|.++++| +++||+||.+.. .|.|+||++++ +.|++.|+|+... .||.|.+++|+|+++.+. .....
T Consensus 136 ~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~ 213 (329)
T 1htr_B 136 AMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE--LYWQIGIEEFLIGGQASGWCSEGCQ 213 (329)
T ss_dssp HHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS--SSCEEEECEEEETTEECCTTTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC--ceEEEEEeEEEECCceeeecCCCce
Confidence 77899999999 999999998643 79999999874 4689999999876 699999999999998865 23468
Q ss_pred EEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEE
Q 015972 279 VVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFEL 358 (397)
Q Consensus 279 ~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l 358 (397)
+||||||++++||++++++|.+++.+... . ...+..+|+... .+|+|+|+|+| ++++|
T Consensus 214 aiiDSGTt~~~lp~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~i 271 (329)
T 1htr_B 214 AIVDTGTSLLTVPQQYMSALLQATGAQED------E-YGQFLVNCNSIQ-----------NLPSLTFIING----VEFPL 271 (329)
T ss_dssp EEECTTCCSEEEEGGGHHHHHHHHTCEEC------T-TSCEEECGGGGG-----------GSCCEEEEETT----EEEEE
T ss_pred EEEecCCccEECCHHHHHHHHHHhCCeec------C-CCeEEEeCCCcc-----------cCCcEEEEECC----EEEEE
Confidence 99999999999999999999998854321 1 122234697642 48999999976 99999
Q ss_pred CCCeeEEEeCCCcEEE-EEEeCCcC-CCCC-eeEEccccc
Q 015972 359 TPEAYLIISNKGNVCL-GILNGAEV-GLQD-LNVIGGIGD 395 (397)
Q Consensus 359 ~p~~yi~~~~~~~~C~-~~~~~~~~-~~~~-~~IlGdv~~ 395 (397)
++++|+++.. + .|+ ++...... ..++ .||||+++.
T Consensus 272 ~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl 309 (329)
T 1htr_B 272 PPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFL 309 (329)
T ss_dssp CHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHH
T ss_pred CHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHh
Confidence 9999999865 4 899 56553311 1134 899999753
No 14
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.4e-49 Score=379.90 Aligned_cols=285 Identities=16% Similarity=0.297 Sum_probs=229.2
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCC--CCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPC--VRCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c--~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~ 130 (397)
....||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. .| ..|. .++.|||++|+ +++.
T Consensus 3 ~~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~--- 68 (323)
T 3cms_A 3 VASVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKSS------TFQN--- 68 (323)
T ss_dssp CEEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCEE---
T ss_pred cceeeeEe--ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccCC------CeEE---
Confidence 34578874 34789999999999999999999999999999999 89 4686 46899999884 1221
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCC----
Q 015972 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS---- 205 (397)
Q Consensus 131 ~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~---- 205 (397)
..|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++.+
T Consensus 69 ---------~~~~~~i~Yg~G-s~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 69 ---------LGKPLSIHYGTG-SMQGILGYDTVTVS----NIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp ---------EEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred ---------CCcEEEEEeCCC-CeEEEEEEEEEEEC----CeEEeccEEEEEEecccccccccCCceEEecCcchhhccC
Confidence 367899999999 58999999999995 567889999999986331 22346799999998754
Q ss_pred --Chhhhhhccccc-ceeeEEeecCC-CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeec-CCCC
Q 015972 206 --SIVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL-KNLP 278 (397)
Q Consensus 206 --s~~~ql~~~~~i-~~~Fs~~l~~~-~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~-~~~~ 278 (397)
+++.+|.++++| +++||+||.+. ..|.|+||++++ +.+++.|+|+... .||.|.+++|+|+++.+.. .+..
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~ 212 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ--QYWQFTVDSVTISGVVVACEGGCQ 212 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEESTTCEE
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC--CeEEEEEeeEEECCEEeecCCCcE
Confidence 577899999999 89999999864 459999999874 4689999999876 6999999999999988764 3468
Q ss_pred EEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEE
Q 015972 279 VVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFEL 358 (397)
Q Consensus 279 ~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l 358 (397)
+||||||++++||++++++|.+++.+... . ...+..+|+..+ .+|+|+|+|+| ++++|
T Consensus 213 aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~i 270 (323)
T 3cms_A 213 AILDTGTSKLVGPSSDILNIQQAIGATQN------Q-YGEFDIDCDNLS-----------YMPTVVFEING----KMYPL 270 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHHHHTCEEE------T-TTEEEECTTCTT-----------TSCCEEEEETT----EEEEE
T ss_pred EEEecCCccEeCCHHHHHHHHHHhCCeec------C-CCcEEEECCCCc-----------cCceEEEEECC----EEEEE
Confidence 99999999999999999999998854221 1 112234687642 48999999976 99999
Q ss_pred CCCeeEEEeCCCcEEEE-EEeCCcCCCCCeeEEcccc
Q 015972 359 TPEAYLIISNKGNVCLG-ILNGAEVGLQDLNVIGGIG 394 (397)
Q Consensus 359 ~p~~yi~~~~~~~~C~~-~~~~~~~~~~~~~IlGdv~ 394 (397)
++++|+++ .+..|+. +.... ..+.||||+++
T Consensus 271 ~~~~y~~~--~~~~C~~~i~~~~---~~~~~iLG~~f 302 (323)
T 3cms_A 271 TPSAYTSQ--DQGFCTSGFQSEN---HSQKWILGDVF 302 (323)
T ss_dssp CHHHHEEE--ETTEEEESEEEC------CCEEECHHH
T ss_pred CHHHhccC--CCCEEEEEEEeCC---CCCcEEECHHH
Confidence 99999998 4568995 66543 13579999975
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=4.6e-49 Score=379.88 Aligned_cols=285 Identities=19% Similarity=0.320 Sum_probs=227.0
Q ss_pred EeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCC
Q 015972 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHN 135 (397)
Q Consensus 56 ~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~ 135 (397)
.||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|..|..+.++.|||++|+ +++
T Consensus 3 ~~l~n--~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~Ss------T~~--------- 64 (320)
T 4aa9_A 3 EPLTS--YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSS------TFR--------- 64 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCE---------
T ss_pred cccee--ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCc------CeE---------
Confidence 46653 34789999999999999999999999999999999 8984333356899999884 111
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCC------CChh
Q 015972 136 CEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGK------SSIV 208 (397)
Q Consensus 136 c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~------~s~~ 208 (397)
...|.|.+.|++| .+.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++. .+++
T Consensus 65 ---~~~~~~~i~Yg~g-s~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 136 (320)
T 4aa9_A 65 ---NLGKPLSIHYGTG-SMEGFLGYDTVTVS----NIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVF 136 (320)
T ss_dssp ---EEEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHH
T ss_pred ---cCCcEEEEEECCc-EEEEEEEEEEEEEC----CEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHH
Confidence 1357899999999 58999999999995 567889999999987431 3345679999999874 3578
Q ss_pred hhhhccccc-ceeeEEeecC-CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecC-CCCEEEcC
Q 015972 209 SQLHSQKLI-RNVVGHCLSG-GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK-NLPVVFDS 283 (397)
Q Consensus 209 ~ql~~~~~i-~~~Fs~~l~~-~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~-~~~~iiDS 283 (397)
.+|.++++| +++||+||.+ ...|.|+|||++. +.+++.|+|+... .+|.|.+++|.++++.+... ...+||||
T Consensus 137 ~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~~~~~~iiDs 214 (320)
T 4aa9_A 137 DNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ--QYWQFTVDSVTINGVAVACVGGCQAILDT 214 (320)
T ss_dssp HHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB--TTBEEEECEEEETTEEEESTTCEEEEECT
T ss_pred HHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC--CceEEEEeEEEECCEEeccCCCcEEEEEC
Confidence 899999999 9999999997 4789999999875 5689999999876 69999999999999987653 46899999
Q ss_pred CCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCee
Q 015972 284 GSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAY 363 (397)
Q Consensus 284 GTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~y 363 (397)
||++++||++++++|.+++.+... . ...+..+|+... .+|+|+|+|+| ++++|++++|
T Consensus 215 Gtt~~~lP~~~~~~i~~~~~~~~~------~-~g~~~~~C~~~~-----------~~p~i~f~f~g----~~~~l~~~~y 272 (320)
T 4aa9_A 215 GTSVLFGPSSDILKIQMAIGATEN------R-YGEFDVNCGNLR-----------SMPTVVFEING----RDYPLSPSAY 272 (320)
T ss_dssp TCSSEEEEHHHHHHHHHHTTCEEC------T-TSCEEECGGGGG-----------GCCCEEEEETT----EEEEECHHHH
T ss_pred CCCcEECCHHHHHHHHHHhCCccc------C-CCcEEEeCCCCC-----------cCceEEEEECC----EEEEECHHHh
Confidence 999999999999999988854321 1 122334687642 48999999987 9999999999
Q ss_pred EEEeCCCcEEEE-EEeCCcCCCCCeeEEccccc
Q 015972 364 LIISNKGNVCLG-ILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 364 i~~~~~~~~C~~-~~~~~~~~~~~~~IlGdv~~ 395 (397)
+.+ .+..|+. +.... .++.||||+++.
T Consensus 273 ~~~--~~~~C~~~i~~~~---~~~~~ilG~~fl 300 (320)
T 4aa9_A 273 TSK--DQGFCTSGFQGDN---NSELWILGDVFI 300 (320)
T ss_dssp EEE--ETTEEEESEEEET---TCCCEEECHHHH
T ss_pred ccC--CCCeEEEEEEcCC---CCCcEEEChHHh
Confidence 976 3568995 65532 235799999763
No 16
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-48 Score=377.90 Aligned_cols=278 Identities=19% Similarity=0.287 Sum_probs=225.8
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCC-CCCC---------CCCCCCCCCCCCCCCCCCCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCVR---------CVEAPHPLYRPSNDLVPCED 122 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~-~c~~---------C~~~~~~~f~p~~S~~~C~s 122 (397)
.+.+||... +.+|+++|.||||+|++.|+|||||+++||+|.. +|.. |. .++.|||++|+
T Consensus 2 ~~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss----- 71 (334)
T 1j71_A 2 DVPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCK--QEGTFDPSSSS----- 71 (334)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--SSCCBCGGGCT-----
T ss_pred ceeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccccccccccc--CCCcCCcccCC-----
Confidence 467888754 6789999999999999999999999999998541 3543 43 46789998874
Q ss_pred ccccccCCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCCCCCCccEEEecCC
Q 015972 123 PICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGK 202 (397)
Q Consensus 123 ~~C~~~~~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~ 202 (397)
+++ ...|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+
T Consensus 72 -T~~------------~~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~------~~~GilGLg~ 128 (334)
T 1j71_A 72 -SAQ------------NLNQDFSIEYGDLTSSQGSFYKDTVGFG----GISIKNQQFADVTTTS------VDQGIMGIGF 128 (334)
T ss_dssp -TCE------------EEEEEEEEEBTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECSC
T ss_pred -Ccc------------cCCCceEEEECCCCEEEEEEEEEEEEEC----CEEEccEEEEEEEecC------CCccEEEEcC
Confidence 111 1367999999999889999999999995 5678899999999862 4799999999
Q ss_pred CCC--------Chhhhhhccccc-ceeeEEeecC--CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECC
Q 015972 203 GKS--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGG 269 (397)
Q Consensus 203 ~~~--------s~~~ql~~~~~i-~~~Fs~~l~~--~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g 269 (397)
... +++.+|.++++| +++||+||.+ ...|.|+|||+++ +.|++.|+|+... .+|.|.+++|.+++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g 206 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS--VELRVHLGSINFDG 206 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS--SSCEEEEEEEEETT
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC--CeEEEEEeEEEECC
Confidence 764 789999999999 8999999985 4689999999864 4689999999887 59999999999999
Q ss_pred eEeecCCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCC-CcccccccCCcccccccccccEEEEEEe
Q 015972 270 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETL-PLCWKGRRPFKNVHDVKKCFRTLALSFT 348 (397)
Q Consensus 270 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~~~~P~i~f~f~ 348 (397)
+.+.. +..+||||||++++||++++++|.+++.+... .. ...+. .+|+. +|.|+|+|+
T Consensus 207 ~~~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~~~~~~~~C~~--------------~p~i~f~f~ 265 (334)
T 1j71_A 207 TSVST-NADVVLDSGTTITYFSQSTADKFARIVGATWD-----SR-NEIYRLPSCDL--------------SGDAVFNFD 265 (334)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-----TT-TTEEECSSSCC--------------CSEEEEEES
T ss_pred EeccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCccc-----CC-CceEEEEcCCC--------------CCceEEEEc
Confidence 98864 46799999999999999999999999875542 11 11122 56853 689999996
Q ss_pred cCCCCeEEEECCCeeEEEeCCCcEEEEEEeCCcCCCCCeeEEcccc
Q 015972 349 DGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIG 394 (397)
Q Consensus 349 g~~~~~~~~l~p~~yi~~~~~~~~C~~~~~~~~~~~~~~~IlGdv~ 394 (397)
| +++++|++++|+++..++..|+..+... +.||||+++
T Consensus 266 ~---g~~~~i~~~~y~~~~~~~~~C~~~i~~~-----~~~iLG~~f 303 (334)
T 1j71_A 266 Q---GVKITVPLSELILKDSDSSICYFGISRN-----DANILGDNF 303 (334)
T ss_dssp T---TCEEEEEGGGGEEECSSSSCEEESEEEC-----TTCEECHHH
T ss_pred C---CcEEEECHHHheeecCCCCeeEEEEeEC-----CCcEEChHh
Confidence 5 4999999999999865555698644432 258999975
No 17
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.8e-48 Score=383.34 Aligned_cols=283 Identities=19% Similarity=0.270 Sum_probs=229.5
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCccccccCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~C~s~~C~~~~~ 130 (397)
...+||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|. .|. .++.|||++|+ +|+.
T Consensus 51 ~~~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~--- 116 (375)
T 1miq_A 51 NDVIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCS--IKNLYDSSKSK------SYEK--- 116 (375)
T ss_dssp TBCCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGG--GSCCBCGGGCT------TCEE---
T ss_pred cceEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCccccc--CCCcCCCccCC------ceEE---
Confidence 34578874 34789999999999999999999999999999999 897 565 47899998884 1221
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEe----cCCCCCCCCccEEEecCCCCC-
Q 015972 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGKS- 205 (397)
Q Consensus 131 ~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~~- 205 (397)
..|.|.+.|++|+ +.|.+++|+|+|+ +..+++ .|||++. +. .+.....+||||||++.+
T Consensus 117 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s 180 (375)
T 1miq_A 117 ---------DGTKVDITYGSGT-VKGFFSKDLVTLG----HLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLS 180 (375)
T ss_dssp ---------EEEEEEEEETTEE-EEEEEEEEEEEET----TEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTT
T ss_pred ---------CCcEEEEEeCCCe-EEEEEEEEEEEEc----CceECc-EEEEEEecccccc-ccccCCCceEEeCCCCccc
Confidence 3579999999995 8999999999995 567788 9999998 43 222356899999999864
Q ss_pred -----Chhhhhhccccc-ceeeEEeecCC--CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecC
Q 015972 206 -----SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK 275 (397)
Q Consensus 206 -----s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~ 275 (397)
+++.+|.++++| +++||+||.+. ..|.|+|||++. +.|++.|+|+... .||.|.++ |.|+++.+ .
T Consensus 181 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~-i~v~g~~~--~ 255 (375)
T 1miq_A 181 IGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD--LYWQIDLD-VHFGKQTM--E 255 (375)
T ss_dssp CSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS--SSSEEEEE-EEETTEEE--E
T ss_pred ccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC--ceEEEEEE-EEECCEEc--c
Confidence 477899999999 89999999864 489999999874 4689999999875 69999999 99999887 4
Q ss_pred CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeE
Q 015972 276 NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTL 355 (397)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~ 355 (397)
+..+||||||++++||++++++|.+++.+... .. ...+..+|+. . .+|+|+|+|+| ++
T Consensus 256 ~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~-~-----------~~P~i~f~f~g----~~ 313 (375)
T 1miq_A 256 KANVIVDSGTTTITAPSEFLNKFFANLNVIKV-----PF-LPFYVTTCDN-K-----------EMPTLEFKSAN----NT 313 (375)
T ss_dssp EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC-----TT-SSCEEEETTC-T-----------TCCCEEEECSS----CE
T ss_pred cceEEecCCCccEEcCHHHHHHHHHHhCCccc-----CC-CCeEEEECCC-C-----------CCCcEEEEECC----EE
Confidence 67899999999999999999999999864322 11 1223356876 2 37999999986 99
Q ss_pred EEECCCeeEEEeCC--CcEEE-EEEeCCcCCCCCeeEEcccc
Q 015972 356 FELTPEAYLIISNK--GNVCL-GILNGAEVGLQDLNVIGGIG 394 (397)
Q Consensus 356 ~~l~p~~yi~~~~~--~~~C~-~~~~~~~~~~~~~~IlGdv~ 394 (397)
++|+|++|+++... ...|+ ++...... .+.||||+++
T Consensus 314 ~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~--~~~~ILG~~f 353 (375)
T 1miq_A 314 YTLEPEYYMNPILEVDDTLCMITMLPVDID--SNTFILGDPF 353 (375)
T ss_dssp EEECGGGSEEESSSSSCSEEEESEEECCSS--SSEEEECHHH
T ss_pred EEECHHHhEeeccCCCCCeEEEEEEECCCC--CCcEEECHHH
Confidence 99999999998642 45898 67665421 2589999986
No 18
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=7.4e-48 Score=374.84 Aligned_cols=282 Identities=18% Similarity=0.303 Sum_probs=225.0
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCC-CCCC---------CCCCCCCCCCCCCCCCCCCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCVR---------CVEAPHPLYRPSNDLVPCED 122 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~-~c~~---------C~~~~~~~f~p~~S~~~C~s 122 (397)
.+.+||... +.+|+++|.||||+|++.|+|||||+++||+|.. +|.. |. .++.|||++|+
T Consensus 2 ~v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss----- 71 (342)
T 2qzx_A 2 PVAVTLHNE---AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCK--SAGSYSPASSR----- 71 (342)
T ss_dssp CEEEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGG--TTCCBCGGGCT-----
T ss_pred ceeEEEecC---CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCcccccc--CCCcCCcccCC-----
Confidence 456788753 6799999999999999999999999999998531 3643 43 46789998874
Q ss_pred ccccccCCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCCCCCCccEEEecCC
Q 015972 123 PICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGK 202 (397)
Q Consensus 123 ~~C~~~~~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~ 202 (397)
+++ ...|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+
T Consensus 72 -T~~------------~~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~------~~~GilGLg~ 128 (342)
T 2qzx_A 72 -TSQ------------NLNTRFDIKYGDGSYAKGKLYKDTVGIG----GVSVRDQLFANVWSTS------ARKGILGIGF 128 (342)
T ss_dssp -TCE------------EEEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEEC------SSSCEEECSC
T ss_pred -Ccc------------cCCCcEEEEeCCCCeEEEEEEEEEEEEC----CEEecceEEEEEEecC------CCcCEEEEcc
Confidence 111 1367999999999889999999999995 5678899999999862 4799999999
Q ss_pred CCC--------Chhhhhhccccc-ceeeEEeecC--CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECC
Q 015972 203 GKS--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGG 269 (397)
Q Consensus 203 ~~~--------s~~~ql~~~~~i-~~~Fs~~l~~--~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g 269 (397)
... +++.+|.++++| +++||+||.+ ...|.|+|||+++ +.|++.|+|+... .+|.|.+++|+|++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g 206 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE--KKLTVGLRSVNVRG 206 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETT
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC--ceEEEEEeEEEECC
Confidence 754 788999999999 8999999985 4689999999864 5799999999987 49999999999999
Q ss_pred eEeecCCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEec
Q 015972 270 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 349 (397)
Q Consensus 270 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g 349 (397)
+.+.. +..+||||||++++||++++++|.+++.+.... .......+..+|+. +|.|+|+|+|
T Consensus 207 ~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~~~C~~--------------~p~i~f~f~~ 268 (342)
T 2qzx_A 207 RNVDA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF---DSAGNKVYVADCKT--------------SGTIDFQFGN 268 (342)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE---CTTSCEEEEECTTC--------------CCEEEEEETT
T ss_pred EecCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee---ccCCCcEEEEECCC--------------CCcEEEEECC
Confidence 98764 467999999999999999999999998765431 11101112235753 6899999965
Q ss_pred CCCCeEEEECCCeeEEEeC-----CCcEEEEEEeCCcCCCCCeeEEccccc
Q 015972 350 GKTRTLFELTPEAYLIISN-----KGNVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 350 ~~~~~~~~l~p~~yi~~~~-----~~~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
+++++|++++|+++.. .+..|++.+... +.||||+++.
T Consensus 269 ---g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~fl 311 (342)
T 2qzx_A 269 ---NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNFL 311 (342)
T ss_dssp ---TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHHH
T ss_pred ---CcEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHhh
Confidence 4999999999998742 235899755433 2589999753
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.6e-48 Score=376.06 Aligned_cols=291 Identities=17% Similarity=0.248 Sum_probs=233.9
Q ss_pred CCceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC----CCCCCCCCCCCCCCCCCCCCCcccc
Q 015972 51 CSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICA 126 (397)
Q Consensus 51 ~~~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~----~C~~~~~~~f~p~~S~~~C~s~~C~ 126 (397)
+..+.+||.+. .+.+|+++|.||||||++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 5 ~~~~~~~l~n~--~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~Ss------T~~ 73 (341)
T 3k1w_A 5 NTTSSVILTNY--MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------SYK 73 (341)
T ss_dssp CBCEEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCT------TCE
T ss_pred CCCccccceEc--cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCc------Cee
Confidence 35667888753 4789999999999999999999999999999999 897 575 46899999884 111
Q ss_pred ccCCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCC
Q 015972 127 SLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS 205 (397)
Q Consensus 127 ~~~~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~ 205 (397)
...|.|.+.|++| .+.|.+++|+|+|+ +..+ ++.|||++..... +.....+||||||++..
T Consensus 74 ------------~~~~~~~i~Yg~g-s~~G~~~~D~v~ig----~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 74 ------------HNGTELTLRYSTG-TVSGFLSQDIITVG----GITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp ------------EEEEEEEEEETTE-EEEEEEEEEEEEET----TEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGG
T ss_pred ------------ECCCEEEEEECCc-EEEEEEEEEEEEEC----Ccee-eEEEEEEEEccccccccCCcceEEECCchhh
Confidence 1367999999999 59999999999995 5667 9999999987432 34566899999999865
Q ss_pred C------hhhhhhccccc-ceeeEEeecCCC------ceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCe
Q 015972 206 S------IVSQLHSQKLI-RNVVGHCLSGGG------GGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGE 270 (397)
Q Consensus 206 s------~~~ql~~~~~i-~~~Fs~~l~~~~------~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~ 270 (397)
+ ++.+|.++++| +++||+||.+.. .|.|+|||++. +.|++.|+|+... .+|.|.+++|.++++
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~ 213 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSS 213 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST--TSCEEEECCEEETTE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC--CEEEEEEeEEEECCE
Confidence 4 78899999999 899999998653 89999999874 5789999999865 699999999999998
Q ss_pred Eeec-CCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEec
Q 015972 271 TTGL-KNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 349 (397)
Q Consensus 271 ~~~~-~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g 349 (397)
.+.. .+..+||||||++++||++++++|.+++.+... . .. +..+|.... .+|+|+|+|+|
T Consensus 214 ~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------~-~g-~~~~C~~~~-----------~~p~i~f~f~g 274 (341)
T 3k1w_A 214 TLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR------L-FD-YVVKCNEGP-----------TLPDISFHLGG 274 (341)
T ss_dssp EEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC------S-SC-EEEEGGGGG-----------GCCCEEEEETT
T ss_pred EeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec------C-CC-eEEeCCCCC-----------cCCcEEEEECC
Confidence 7543 346899999999999999999999998854321 1 12 334687532 48999999997
Q ss_pred CCCCeEEEECCCeeEEEeCC--CcEEE-EEEeCCc-CCCCCeeEEccccc
Q 015972 350 GKTRTLFELTPEAYLIISNK--GNVCL-GILNGAE-VGLQDLNVIGGIGD 395 (397)
Q Consensus 350 ~~~~~~~~l~p~~yi~~~~~--~~~C~-~~~~~~~-~~~~~~~IlGdv~~ 395 (397)
++++|++++|++...+ +..|+ ++..... ......||||+++.
T Consensus 275 ----~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl 320 (341)
T 3k1w_A 275 ----KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFI 320 (341)
T ss_dssp ----EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHH
T ss_pred ----EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHh
Confidence 9999999999987542 57899 4655321 11245799999763
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.9e-47 Score=370.20 Aligned_cols=281 Identities=20% Similarity=0.272 Sum_probs=227.9
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEe-----cCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQ-----CDAPCVRCVEAPHPLYRPSNDLVPCEDPICAS 127 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~-----~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~ 127 (397)
++.+||... +.+|+++|.||||||++.|+|||||+++||+ |. +|..|. .++.|+|++|+ +++
T Consensus 2 ~i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~Ss------T~~- 68 (339)
T 3fv3_A 2 SISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSS------SYK- 68 (339)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCT------TCE-
T ss_pred ceeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCc------cee-
Confidence 467888754 5689999999999999999999999999998 66 666787 46899999884 111
Q ss_pred cCCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCCCCCCccEEEecCCCCCC-
Q 015972 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS- 206 (397)
Q Consensus 128 ~~~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~s- 206 (397)
...|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||++..+
T Consensus 69 -----------~~~~~~~i~Yg~gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 69 -----------NLGAAFTIRYGDGSTSQGTWGKDTVTIN----GVSITGQQIADVTQTS------VDQGILGIGYTSNEA 127 (339)
T ss_dssp -----------EEEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECSCGGGCC
T ss_pred -----------eCCceEEEEECCCceEEEEEEEEEEEEC----CEEECceEEEEEEecC------CCceeEEecCccccc
Confidence 1357999999999999999999999995 5778899999999873 26999999997643
Q ss_pred ---------------hhhhhhccccc-ceeeEEeecCC--CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEE
Q 015972 207 ---------------IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELF 266 (397)
Q Consensus 207 ---------------~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~ 266 (397)
++.+|.++++| +++||+||.+. ..|.|+|||++. +.|++.|+|+... .+|.|.+++|.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~ 205 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS--QALTISLASVN 205 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS--SSCEEEEEEEE
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC--ccEEEEEEEEE
Confidence 78999999999 89999999853 489999998864 5799999999987 59999999999
Q ss_pred ECCeEeecCCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEE
Q 015972 267 FGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALS 346 (397)
Q Consensus 267 v~g~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~ 346 (397)
++++.+.. ...+||||||++++||++++++|.+++.+..... ... ...+..+|+.. .+|.|+|+
T Consensus 206 v~g~~~~~-~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~-~~~~~~~C~~~------------~~p~i~f~ 269 (339)
T 3fv3_A 206 LKGSSFSF-GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV--ARD-QYLYFIDCNTD------------TSGTTVFN 269 (339)
T ss_dssp ESSCEEEE-EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE--ETT-EEEEEECTTCC------------CCSEEEEE
T ss_pred ECCEeecC-CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc--ccc-CceEEEecCCC------------CCCcEEEE
Confidence 99998765 3679999999999999999999999997543310 001 12233468752 37999999
Q ss_pred EecCCCCeEEEECCCeeEEEeCCCcEEE-EEEeCCcCCCCCeeEEccccc
Q 015972 347 FTDGKTRTLFELTPEAYLIISNKGNVCL-GILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 347 f~g~~~~~~~~l~p~~yi~~~~~~~~C~-~~~~~~~~~~~~~~IlGdv~~ 395 (397)
|++ +++++|++++|+++.. +..|+ ++.. . +.||||+.+.
T Consensus 270 f~~---g~~~~v~~~~~~~~~~-~~~C~~~i~~-~-----~~~ilG~~fl 309 (339)
T 3fv3_A 270 FGN---GAKITVPNTEYVYQNG-DGTCLWGIQP-S-----DDTILGDNFL 309 (339)
T ss_dssp ETT---SCEEEEEGGGGEEECS-SSCEEESEEE-C-----SSCEECHHHH
T ss_pred ECC---CCEEEECHHHheeeCC-CCeEEEEEEe-C-----CcEEeChHHH
Confidence 975 4999999999998754 34675 6665 2 3699998763
No 21
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-47 Score=369.40 Aligned_cols=279 Identities=18% Similarity=0.245 Sum_probs=223.7
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCc
Q 015972 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (397)
Q Consensus 64 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~ 143 (397)
.+.+|+++|+|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ + ....|.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----------------~~~~~~ 69 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA--T-----------------KLSGYS 69 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC--E-----------------ECTTCB
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC--C-----------------ccCCCE
Confidence 367899999999 89999999999999999999 9998876778999999884 1 113679
Q ss_pred ceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCCC---------hhhhhhc
Q 015972 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---------IVSQLHS 213 (397)
Q Consensus 144 ~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s---------~~~ql~~ 213 (397)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++..+.. ......+||||||++.++ ++++|.+
T Consensus 70 ~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~ 145 (325)
T 1ibq_A 70 WDISYGDGSSASGDVYRDTVTVG----GVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKS 145 (325)
T ss_dssp EEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred EEEEeCCCCEEEEEEEEeEEEEC----CEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHH
Confidence 99999999779999999999995 567889999999986432 222568999999997544 5688887
Q ss_pred ccccceeeEEeecCCCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceecC
Q 015972 214 QKLIRNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLN 291 (397)
Q Consensus 214 ~~~i~~~Fs~~l~~~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp 291 (397)
+ +.+++||+||.++..|.|+||++++ +.|++.|+|+.... .||.|.+++|+|+++.+...+..+||||||++++||
T Consensus 146 ~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP 223 (325)
T 1ibq_A 146 Q-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQ-GYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLD 223 (325)
T ss_dssp G-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTT-SSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEEC
T ss_pred h-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCC-ceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCC
Confidence 6 2389999999987789999999874 57999999998544 799999999999998776556789999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCC-C
Q 015972 292 RVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK-G 370 (397)
Q Consensus 292 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~-~ 370 (397)
++++++|.+++.++.. ... ...+..+|+. .+|+|+|+|+| ++++||+++|++...+ +
T Consensus 224 ~~~~~~i~~~i~~a~~----~~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~i~~~~~~~~~~~~~ 281 (325)
T 1ibq_A 224 DEIVSAYYEQVSGAQE----SYE-AGGYVFSCST-------------DLPDFTVVIGD----YKAVVPGKYINYAPVSTG 281 (325)
T ss_dssp HHHHHHHHTTSTTCBC----CSS-SSSCEEETTC-------------CCCCEEEEETT----EEEEECHHHHEEEESSTT
T ss_pred HHHHHHHHHhCCCceE----cCc-CCeEEEEcCC-------------CCCcEEEEECC----EEEEECHHHhcccccCCC
Confidence 9999999888743211 111 1122235873 27999999975 9999999999987633 3
Q ss_pred -cEEEE-EEeCCcCCCCCeeEEccccc
Q 015972 371 -NVCLG-ILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 371 -~~C~~-~~~~~~~~~~~~~IlGdv~~ 395 (397)
..|++ +.... ..+.||||+++.
T Consensus 282 ~~~C~~~i~~~~---~~~~~iLG~~fl 305 (325)
T 1ibq_A 282 SSTCYGGIQSNS---GLGLSILGDVFL 305 (325)
T ss_dssp CSEEEESEEECT---TTCSEEECHHHH
T ss_pred CCeEEEEEEcCC---CCCceEEChHHh
Confidence 78997 44432 135799999863
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=9.5e-48 Score=371.15 Aligned_cols=277 Identities=15% Similarity=0.198 Sum_probs=221.7
Q ss_pred CeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcc
Q 015972 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (397)
Q Consensus 65 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~~ 144 (397)
+.+|+++|+|| ||++.|+|||||+++||+|. +|..|..+.++.|+|++|+ + + .+.|.|
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----~------------~~~~~~ 71 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA--Q-----K------------IDGATW 71 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC--E-----E------------EEEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC--C-----c------------cCCCeE
Confidence 66899999999 79999999999999999999 9998766678999999884 1 1 135799
Q ss_pred eeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCC-CCCCccEEEecCCCCCC---------hhhhhhcc
Q 015972 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHSQ 214 (397)
Q Consensus 145 ~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~s---------~~~ql~~~ 214 (397)
.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+ .....+||||||++.++ ++++|.++
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~ 147 (323)
T 1izd_A 72 SISYGDGSSASGDVYKDKVTVG----GVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEEcCCCCeEEEEEEEEEEEEC----CEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh
Confidence 9999999779999999999995 5678899999999864321 12468999999997543 56788876
Q ss_pred cccceeeEEeecCCCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCH
Q 015972 215 KLIRNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (397)
Q Consensus 215 ~~i~~~Fs~~l~~~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~ 292 (397)
+-+++||+||.++..|.|+||++++ +.|++.|+|+.... .||.|.+++|+|++ .+...+..+||||||++++||+
T Consensus 148 -i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~~~lp~ 224 (323)
T 1izd_A 148 -LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQ-GFWGFTADGYSIGS-DSSSDSITGIADTGTTLLLLDD 224 (323)
T ss_dssp -SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTT-SSCEEEESEEEETT-EEECCCEEEEECTTCCSEEECH
T ss_pred -ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCC-ceEEEEECeEEECC-cccCCCceEEEeCCCcceeCCH
Confidence 3389999999987789999999875 46899999998544 79999999999999 6655567899999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCCCcE
Q 015972 293 VTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNV 372 (397)
Q Consensus 293 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~~~~ 372 (397)
+++++|.+++..+.. ... ...+..+|+. .+|+|+|+|+| ++++|++++|++...++..
T Consensus 225 ~~~~~i~~~i~ga~~----~~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~i~~~~~~~~~~~~~~ 282 (323)
T 1izd_A 225 SIVDAYYEQVNGASY----DSS-QGGYVFPSSA-------------SLPDFSVTIGD----YTATVPGEYISFADVGNGQ 282 (323)
T ss_dssp HHHHHHHTTSTTCEE----ETT-TTEEEEETTC-------------CCCCEEEEETT----EEEEECHHHHEEEECSTTE
T ss_pred HHHHHHHHhCCCcEE----cCc-CCEEEEECCC-------------CCceEEEEECC----EEEecCHHHeEEecCCCCe
Confidence 999999888743211 111 1112235863 27999999965 9999999999988655679
Q ss_pred EEE-EEeCCcCCCCCeeEEccccc
Q 015972 373 CLG-ILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 373 C~~-~~~~~~~~~~~~~IlGdv~~ 395 (397)
|++ +.... ..+.||||+++.
T Consensus 283 C~~~i~~~~---~~~~~IlG~~fl 303 (323)
T 1izd_A 283 TFGGIQSNS---GIGFSIFGDVFL 303 (323)
T ss_dssp EEESEEECT---TTSSEEECHHHH
T ss_pred EEEEEEcCC---CCCcEEEChHHh
Confidence 997 55443 135799999863
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.8e-47 Score=370.67 Aligned_cols=282 Identities=21% Similarity=0.308 Sum_probs=225.0
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCC--CC---------CCCCCCCCCCCCCCCCCCCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAP--CV---------RCVEAPHPLYRPSNDLVPCE 121 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~--c~---------~C~~~~~~~f~p~~S~~~C~ 121 (397)
++.+|+... +.+|+++|.||||||++.|+|||||+++||+|. . |. .|. .++.|+|++|+
T Consensus 2 ~v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss---- 71 (342)
T 3pvk_A 2 AVPVTLHNE---QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCK--QKGTYDPSGSS---- 71 (342)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGG--TTCCBCGGGCT----
T ss_pred CcceEEecC---CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCC--CCCcCCCccCc----
Confidence 356788653 678999999999999999999999999999865 3 53 454 46889998874
Q ss_pred CccccccCCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCCCCCCccEEEecC
Q 015972 122 DPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLG 201 (397)
Q Consensus 122 s~~C~~~~~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg 201 (397)
+++ ...|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||
T Consensus 72 --T~~------------~~~~~~~i~Yg~gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~------~~~GilGLg 127 (342)
T 3pvk_A 72 --ASQ------------DLNTPFKIGYGDGSSSQGTLYKDTVGFG----GVSIKNQVLADVDSTS------IDQGILGVG 127 (342)
T ss_dssp --TCE------------EEEEEEEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECS
T ss_pred --cee------------ecCCeEEEEecCCCeEEEEEEEEEEEEC----CEEecceEEEEEEccC------CCccEEEec
Confidence 111 1357999999999889999999999995 5778899999998863 479999999
Q ss_pred CCC-------CChhhhhhccccc-ceeeEEeecC--CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECC
Q 015972 202 KGK-------SSIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGG 269 (397)
Q Consensus 202 ~~~-------~s~~~ql~~~~~i-~~~Fs~~l~~--~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g 269 (397)
+.. .+++.+|.++++| +++||+||.+ ...|.|+|||++. +.|++.|+|+... .+|.|.+++|.+++
T Consensus 128 ~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g 205 (342)
T 3pvk_A 128 YKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD--RELRISLGSVEVSG 205 (342)
T ss_dssp CGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETT
T ss_pred CccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc--ceEEEEEeEEEECC
Confidence 986 4799999999999 8999999985 3579999998864 5799999999987 49999999999999
Q ss_pred eEeecCCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEec
Q 015972 270 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 349 (397)
Q Consensus 270 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g 349 (397)
+.+...+..+||||||++++||++++++|.+++.+..... ......+..+|+. .|+|+|+|++
T Consensus 206 ~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~--------------~p~i~f~f~~ 268 (342)
T 3pvk_A 206 KTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCNL--------------SGDVVFNFSK 268 (342)
T ss_dssp EEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECSCC--------------CSEEEEEEST
T ss_pred EEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEecCC--------------CCceEEEECC
Confidence 9987766789999999999999999999999986554311 0001112345753 4899999985
Q ss_pred CCCCeEEEECCCeeEEEeC--CC---cEEEEEEeCCcCCCCCeeEEccccc
Q 015972 350 GKTRTLFELTPEAYLIISN--KG---NVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 350 ~~~~~~~~l~p~~yi~~~~--~~---~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
+++++||+++|+++.. ++ ..|+..+... +.||||+++.
T Consensus 269 ---g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~-----~~~ilG~~fl 311 (342)
T 3pvk_A 269 ---NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN-----DANILGDNFL 311 (342)
T ss_dssp ---TCEEEEEGGGGEEC----------CEEESEEEC-----TTCEECHHHH
T ss_pred ---CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC-----CCeEeCHHHH
Confidence 4899999999998632 23 6798544432 3689999763
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.4e-47 Score=382.21 Aligned_cols=284 Identities=19% Similarity=0.263 Sum_probs=227.1
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCccccccCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~C~s~~C~~~~~ 130 (397)
...+||.. +.+.+|+++|+||||||++.|+|||||+++||+|. .|. .|. .++.|||++|+ +++.
T Consensus 127 ~~~~~L~n--~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~--~~~~ydps~Ss------T~~~--- 192 (453)
T 2bju_A 127 NDNIELVD--FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCL--TKHLYDSSKSR------TYEK--- 192 (453)
T ss_dssp SEEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGG--GSCCBCGGGCT------TCEE---
T ss_pred CCceeeEe--cCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccC--CCCcCCCccCC------ceeE---
Confidence 34578874 34789999999999999999999999999999999 997 565 57899998884 1221
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecC--CC-CCCCCccEEEecCCCCC--
Q 015972 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQV--PG-ASYHPLDGILGLGKGKS-- 205 (397)
Q Consensus 131 ~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~--~~-~~~~~~~GIlGLg~~~~-- 205 (397)
.+|.|.+.|++|+ +.|.+++|+|+|+ +..++ +.|||++... +. +.....+||||||++.+
T Consensus 193 ---------~~~~~~i~YgdGs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~ 257 (453)
T 2bju_A 193 ---------DGTKVEMNYVSGT-VSGFFSKDLVTVG----NLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSI 257 (453)
T ss_dssp ---------EEEEEEEECSSSE-EEEEEEEEEEEET----TEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGST
T ss_pred ---------CCcEEEEEcCCCC-eEEEEEEEEEEEe----CcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccc
Confidence 3679999999995 8999999999995 56677 9999999874 22 22356899999998754
Q ss_pred ----Chhhhhhccccc-ceeeEEeecCC--CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCC
Q 015972 206 ----SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKN 276 (397)
Q Consensus 206 ----s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~ 276 (397)
+++.+|.++++| +++||+||.+. .+|.|+|||++. +.|++.|+|+... .||.|.++ |.|+++.+ .+
T Consensus 258 ~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~--~~w~V~l~-I~Vgg~~~--~~ 332 (453)
T 2bju_A 258 GSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD--LYWQITLD-AHVGNIML--EK 332 (453)
T ss_dssp TCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE--TTEEEEEE-EEETTEEE--EE
T ss_pred cCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC--ceEEEEEE-EEECcEEe--cc
Confidence 467899999999 89999999864 689999999874 4689999999876 69999999 99999443 56
Q ss_pred CCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEE
Q 015972 277 LPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLF 356 (397)
Q Consensus 277 ~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~ 356 (397)
..+||||||++++||++++++|.+++.+.. ......+..+|+. . .+|+|+|+|+| +++
T Consensus 333 ~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~------~~~g~~~~v~C~~-~-----------~~P~itf~fgg----~~~ 390 (453)
T 2bju_A 333 ANCIVDSGTSAITVPTDFLNKMLQNLDVIK------VPFLPFYVTLCNN-S-----------KLPTFEFTSEN----GKY 390 (453)
T ss_dssp EEEEECTTCCSEEECHHHHHHHTTTSSCEE------CTTSSCEEEETTC-T-----------TCCCEEEECSS----CEE
T ss_pred ccEEEcCCCCeEecCHHHHHHHHHHhCCcc------cCCCceEEEecCC-C-----------CCCcEEEEECC----EEE
Confidence 789999999999999999999988775421 1111023346875 2 37999999986 999
Q ss_pred EECCCeeEEEeCC--CcEEE-EEEeCCcCCCCCeeEEcccc
Q 015972 357 ELTPEAYLIISNK--GNVCL-GILNGAEVGLQDLNVIGGIG 394 (397)
Q Consensus 357 ~l~p~~yi~~~~~--~~~C~-~~~~~~~~~~~~~~IlGdv~ 394 (397)
+|+|++|+++... +..|+ ++...... .+.||||+++
T Consensus 391 ~l~~~~yi~~~~~~g~~~C~~~~~~~~~~--~~~~ILGd~F 429 (453)
T 2bju_A 391 TLEPEYYLQHIEDVGPGLCMLNIIGLDFP--VPTFILGDPF 429 (453)
T ss_dssp EECHHHHEEECTTTSTTEEEECEEECCCS--SCEEEECHHH
T ss_pred EECHHHhEeecccCCCceEEEEEEeCCCC--CCCEEECHHH
Confidence 9999999998753 46898 56654421 3489999976
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.5e-47 Score=369.27 Aligned_cols=286 Identities=15% Similarity=0.197 Sum_probs=227.4
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCccccccCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~C~s~~C~~~~~ 130 (397)
++..||.+ +.+.+|+++|+|| ||++.|+|||||+++||+|. .|. .|..+.++.|||++|+ ++.
T Consensus 6 ~~~~~l~n--~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~ST-------~~~--- 70 (330)
T 1yg9_A 6 PLYKLVHV--FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKPK-------YIS--- 70 (330)
T ss_dssp CSCSCEEE--EECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSCE-------EEE---
T ss_pred eeEeeeec--CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCCc-------eEE---
Confidence 33456653 2366899999999 89999999999999999999 997 6844467899998871 111
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCCCCCCccEEEecCCCCCC----
Q 015972 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS---- 206 (397)
Q Consensus 131 ~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~s---- 206 (397)
.++.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++.....+.....+||||||++.++
T Consensus 71 ---------~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~ 136 (330)
T 1yg9_A 71 ---------DGNVQVKFFDTG-SAVGRGIEDSLTIS----QLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALK 136 (330)
T ss_dssp ---------EEEEEEEETTTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTS
T ss_pred ---------CCCEEEEEECCc-eEEEEEEEEEEEEC----CEEEcCeEEEEEEEcccccccccCceEEEcCcchhccccC
Confidence 246899999999 56999999999995 567889999999987222333568999999998766
Q ss_pred ---hhhhhhcccccceeeEEeecCC--C--ceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCC
Q 015972 207 ---IVSQLHSQKLIRNVVGHCLSGG--G--GGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 277 (397)
Q Consensus 207 ---~~~ql~~~~~i~~~Fs~~l~~~--~--~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~ 277 (397)
++++|.++++|+++||+||.+. . .|.|+||+++. +.|++.|+|+... .||.|.+++|.|+++.+...+.
T Consensus 137 ~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~~~ 214 (330)
T 1yg9_A 137 GKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD--DSWKFRLDGVKIGDTTVAPAGT 214 (330)
T ss_dssp CCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT--TSCCEECSEEEETTEEEECTTC
T ss_pred CCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC--CEEEEEeCeEEECCEEEcCCCc
Confidence 7889999998899999999853 2 89999999874 4689999999865 6999999999999988765567
Q ss_pred CEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCC-CC-CCcccccccCCcccccccccccEEEEEEecCCCCeE
Q 015972 278 PVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPED-ET-LPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTL 355 (397)
Q Consensus 278 ~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~-~~-~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~ 355 (397)
.+||||||++++||++++++|.+++.+.... . .. .+ ..+|+... .+|+|+|+|+| ++
T Consensus 215 ~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----~-g~~~~~~~~C~~~~-----------~~p~i~f~fgg----~~ 273 (330)
T 1yg9_A 215 QAIIDTSKAIIVGPKAYVNPINEAIGCVVEK-----T-TTRRICKLDCSKIP-----------SLPDVTFVING----RN 273 (330)
T ss_dssp EEEECTTCSSEEEEHHHHHHHHHHHTCEEEE-----C-SSCEEEEECGGGGG-----------GSCCEEEEETT----EE
T ss_pred EEEEecCCccccCCHHHHHHHHHHhCCcccC-----C-CceEEEEEECCCcc-----------ccCcEEEEECC----EE
Confidence 8999999999999999999999998543211 1 10 12 33587532 48999999976 99
Q ss_pred EEECCCeeEEEeCCCcEEE-EEEeCCcCCCCCeeEEccccc
Q 015972 356 FELTPEAYLIISNKGNVCL-GILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 356 ~~l~p~~yi~~~~~~~~C~-~~~~~~~~~~~~~~IlGdv~~ 395 (397)
++|++++|+++. +..|+ ++.... ..+.||||+++.
T Consensus 274 ~~l~~~~y~~~~--~~~C~~~i~~~~---~~~~~ilG~~fl 309 (330)
T 1yg9_A 274 FNISSQYYIQQN--GNLCYSGFQPCG---HSDHFFIGDFFV 309 (330)
T ss_dssp EEECHHHHEEEE--TTEEEESEEEET---TCSSEEECHHHH
T ss_pred EEECHHHhcccC--CCcEEEEEEeCC---CCCeEEecHHHh
Confidence 999999999986 56899 455432 135799999753
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.7e-47 Score=369.35 Aligned_cols=275 Identities=17% Similarity=0.223 Sum_probs=220.0
Q ss_pred CeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcc
Q 015972 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (397)
Q Consensus 65 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~~ 144 (397)
+.+|+++|+|| ||++.|+|||||+++||+|. +|..|..+.++.|||++|+ . ....|.|
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----------------~~~~~~~ 71 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG--K-----------------ELSGYTW 71 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC--E-----------------EEEEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC--c-----------------ccCCCeE
Confidence 56899999999 89999999999999999999 9998876778999998874 1 0135799
Q ss_pred eeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCC-CCCCccEEEecCCCCC---------Chhhhhhcc
Q 015972 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKS---------SIVSQLHSQ 214 (397)
Q Consensus 145 ~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~---------s~~~ql~~~ 214 (397)
++.|++|+.+.|.+++|+|+|+ +..++++.|||++..+..+ .....+||||||++.+ +++++|.++
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~ 147 (323)
T 1bxo_A 72 SISYGDGSSASGNVFTDSVTVG----GVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEEeCCCCeEEEEEEEEEEEEC----CEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh
Confidence 9999999779999999999995 5678899999999864322 2256899999998754 366788876
Q ss_pred ccc-ceeeEEeecCCCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceecC
Q 015972 215 KLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLN 291 (397)
Q Consensus 215 ~~i-~~~Fs~~l~~~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp 291 (397)
+ +++||+||.++..|.|+||++++ +.|++.|+|+.... .||.|.+++|+|++ +...+..+||||||++++||
T Consensus 148 --i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs~~~lP 222 (323)
T 1bxo_A 148 --LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQ-GFWSFNVDSYTAGS--QSGDGFSGIADTGTTLLLLD 222 (323)
T ss_dssp --BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTT-SSCEEEEEEEEETT--EEEEEEEEEECTTCSSEEEC
T ss_pred --cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCC-CeEEEEEeeEEECC--ccCCCceEEEeCCCCceeCC
Confidence 6 89999999987789999999874 57999999998544 79999999999999 33345789999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCC-C
Q 015972 292 RVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK-G 370 (397)
Q Consensus 292 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~-~ 370 (397)
++++++|.+++..+.. ... ...+..+|+. .+|+|+|+|+| ++++|++++|++...+ .
T Consensus 223 ~~~~~~l~~~i~~a~~----~~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~l~~~~~~~~~~~~~ 280 (323)
T 1bxo_A 223 DSVVSQYYSQVSGAQQ----DSN-AGGYVFDCST-------------NLPDFSVSISG----YTATVPGSLINYGPSGDG 280 (323)
T ss_dssp HHHHHHHHTTSTTCEE----ETT-TTEEEECTTC-------------CCCCEEEEETT----EEEEECHHHHEEEECSSS
T ss_pred HHHHHHHHHhCCCceE----cCc-CCEEEEECCC-------------CCceEEEEECC----EEEEECHHHeEEeccCCC
Confidence 9999999888743221 111 1112235873 27999999975 9999999999987644 3
Q ss_pred cEEEE-EEeCCcCCCCCeeEEccccc
Q 015972 371 NVCLG-ILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 371 ~~C~~-~~~~~~~~~~~~~IlGdv~~ 395 (397)
..|++ +.... ..+.||||+++.
T Consensus 281 ~~C~~~i~~~~---~~~~~ILG~~fl 303 (323)
T 1bxo_A 281 STCLGGIQSNS---GIGFSIFGDIFL 303 (323)
T ss_dssp SCEEESEEECT---TCSSEEECHHHH
T ss_pred CeEEEEEECCC---CCCcEEEChHHH
Confidence 68997 55433 135799999863
No 27
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.1e-47 Score=382.71 Aligned_cols=222 Identities=19% Similarity=0.298 Sum_probs=185.5
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC---CCCCCCCCCCCCCCCCCCCCCccccccC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLH 129 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~---~C~~~~~~~f~p~~S~~~C~s~~C~~~~ 129 (397)
...+||.+. .+.+|+++|+||||||++.|+|||||+++||+|. .|. .|.. ++.|||++|+ +++
T Consensus 41 ~~~~~l~n~--~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~--- 106 (478)
T 1qdm_A 41 GDIVALKNY--MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACYL--HSRYKAGASS------TYK--- 106 (478)
T ss_dssp SCSGGGCCG--GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGGG--SCCBCGGGCT------TCB---
T ss_pred CceEEeEec--cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCccccC--CCCCCcccCC------Cee---
Confidence 445777643 4779999999999999999999999999999999 895 6874 5889998884 111
Q ss_pred CCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCCC--
Q 015972 130 APGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS-- 206 (397)
Q Consensus 130 ~~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-- 206 (397)
..+|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++.++
T Consensus 107 ---------~~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 107 ---------KNGKPAAIQYGTG-SIAGYFSEDSVTVG----DLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp ---------CCCCEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGG
T ss_pred ---------eCCcEEEEEcCCC-CeEEEEEEEEEEEC----CeEECCEEEEEEEecCCcccccccccceecccccccccC
Confidence 1367999999999 58999999999995 567889999999886332 234567999999998765
Q ss_pred ----hhhhhhccccc-ceeeEEeecCC----CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeec-
Q 015972 207 ----IVSQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL- 274 (397)
Q Consensus 207 ----~~~ql~~~~~i-~~~Fs~~l~~~----~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~- 274 (397)
++.+|.+|++| +++||+||.+. .+|.|+|||+++ +.|++.|+|+... .||.|.+++|.|+++.+..
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~ 250 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK--GYWQFDMGDVLVGGKSTGFC 250 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE--TTEEEEECCEEETTEECSTT
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC--CeEEEEEeEEEECCEEEeec
Confidence 46789999999 89999999863 489999999875 4689999999876 6999999999999988754
Q ss_pred -CCCCEEEcCCCcceecCHHHHHHHHHHHHH
Q 015972 275 -KNLPVVFDSGSSYTYLNRVTYQTLTSIMKK 304 (397)
Q Consensus 275 -~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~ 304 (397)
....+||||||++++||++++++|.++|.+
T Consensus 251 ~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 251 AGGCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp TTCEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred CCCceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 346899999999999999999999988853
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=8.2e-47 Score=378.67 Aligned_cols=283 Identities=17% Similarity=0.210 Sum_probs=225.8
Q ss_pred ceeEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCccccccCC
Q 015972 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~C~s~~C~~~~~ 130 (397)
...+||.. +.+.+|+++|+||||||++.|++||||+++||+|. .|. .|. .++.|||++|+ +++
T Consensus 126 ~~~~pL~n--~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~Ss------T~~---- 190 (451)
T 3qvc_A 126 FDNVELKD--LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKSK------TYE---- 190 (451)
T ss_dssp -CCCCGGG--GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCE----
T ss_pred CCccceee--cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCCc------ccc----
Confidence 34567763 34789999999999999999999999999999999 894 676 46899999884 111
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEe----cCCCCCCCCccEEEecCCCC--
Q 015972 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGK-- 204 (397)
Q Consensus 131 ~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~-- 204 (397)
..+|.|.+.|++|+ +.|.+++|+|+|+ +..++ +.|||++. ... +.....+||||||++.
T Consensus 191 --------~~~~~f~i~YgdGs-~~G~~~~Dtv~ig----g~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s 255 (451)
T 3qvc_A 191 --------KDDTPVKLTSKAGT-ISGIFSKDLVTIG----KLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLS 255 (451)
T ss_dssp --------EEEEEEEEECSSEE-EEEEEEEEEEEET----TEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSS
T ss_pred --------cCCCEEEEEECCCE-EEEEEEEEEEEEC----CEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCccc
Confidence 13579999999995 9999999999995 56777 99999988 433 3344679999999875
Q ss_pred ----CChhhhhhccccc-ceeeEEeecCC--CceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecC
Q 015972 205 ----SSIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK 275 (397)
Q Consensus 205 ----~s~~~ql~~~~~i-~~~Fs~~l~~~--~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~ 275 (397)
.+++.+|.++|+| +++||+||.+. .+|.|+|||++. +.|++.|+|+... .||.|.++ |.|+++ ...
T Consensus 256 ~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~--~~w~v~l~-I~Vgg~--~~~ 330 (451)
T 3qvc_A 256 IGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD--LMWQVDLD-VHFGNV--SSK 330 (451)
T ss_dssp SSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST--TSSEEEEE-EEETTE--EEE
T ss_pred ccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC--CeeEEEEE-EEECCc--cCC
Confidence 3588999999999 89999999964 489999999875 4789999999965 69999999 999998 233
Q ss_pred CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCCCeE
Q 015972 276 NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTL 355 (397)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~ 355 (397)
...+||||||++++||++++++|.+++.+... .. ...+..+|. . ..+|+|+|+|+| ++
T Consensus 331 ~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~-----~~-~g~y~v~C~-~-----------~~~P~itf~fgg----~~ 388 (451)
T 3qvc_A 331 KANVILDSATSVITVPTEFFNQFVESASVFKV-----PF-LSLYVTTCG-N-----------TKLPTLEYRSPN----KV 388 (451)
T ss_dssp EEEEEECTTBSSEEECHHHHHHHHTTTTCEEC-----TT-SSCEEEETT-C-----------TTCCCEEEEETT----EE
T ss_pred CceEEEeCCCccccCCHHHHHHHHHHcCCeec-----CC-CCeEEeeCC-c-----------CcCCcEEEEECC----EE
Confidence 57899999999999999999999988854321 10 122234676 2 247999999987 99
Q ss_pred EEECCCeeEEEeCC--CcEEEE-EEeCCcCCCCCeeEEcccc
Q 015972 356 FELTPEAYLIISNK--GNVCLG-ILNGAEVGLQDLNVIGGIG 394 (397)
Q Consensus 356 ~~l~p~~yi~~~~~--~~~C~~-~~~~~~~~~~~~~IlGdv~ 394 (397)
++|+|++|++...+ +..|+. +..... . .+.||||+++
T Consensus 389 i~lp~~~yi~~~~~~~~~~C~~~i~~~~~-~-~~~~ILG~~F 428 (451)
T 3qvc_A 389 YTLEPKQYLEPLENIFSALCMLNIVPIDL-E-KNTFVLGDPF 428 (451)
T ss_dssp EEECHHHHEEECTTTSTTEEEECEEECCC-S-TTEEEECHHH
T ss_pred EEEcHHHheeecccCCCCeEEEEEEeCCC-C-CCCEEECHHH
Confidence 99999999998642 468985 554431 1 4589999975
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=7.2e-46 Score=366.21 Aligned_cols=297 Identities=19% Similarity=0.268 Sum_probs=222.7
Q ss_pred eeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q 015972 57 QVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNC 136 (397)
Q Consensus 57 pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c 136 (397)
||++.. +.+|+++|+||||||++.|+|||||+++||+|. +|..| ++.|||++|+ +++
T Consensus 6 ~l~~~~--~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~Ss------T~~---------- 62 (383)
T 2ewy_A 6 NLQGDS--GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSS------TYR---------- 62 (383)
T ss_dssp CEEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCT------TCE----------
T ss_pred eccCCC--CCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCc------cce----------
Confidence 455442 568999999999999999999999999999998 88766 4789999884 111
Q ss_pred CCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCC-CCCCccEEEecCCCCC--------Ch
Q 015972 137 EDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKS--------SI 207 (397)
Q Consensus 137 ~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~ 207 (397)
...|.|.+.|++| ++.|.+++|+|+|+. +......+.|+++.+....+ .....+||||||++.+ ++
T Consensus 63 --~~~~~~~i~Yg~G-s~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~ 137 (383)
T 2ewy_A 63 --SKGFDVTVKYTQG-SWTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETF 137 (383)
T ss_dssp --EEEEEEEEECSSC-EEEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred --eCCceEEEEECCc-EEEEEEEEEEEEECC--CccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCH
Confidence 1357899999999 579999999999963 11111246788876653333 2346899999998754 36
Q ss_pred hhhhhcccccceeeEEeecC---------CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecC-
Q 015972 208 VSQLHSQKLIRNVVGHCLSG---------GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK- 275 (397)
Q Consensus 208 ~~ql~~~~~i~~~Fs~~l~~---------~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~- 275 (397)
+.+|.+|+.++++||+||.. ...|.|+||+++. +.|++.|+|+... .||.|.+++|+|+++.+...
T Consensus 138 ~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~~ 215 (383)
T 2ewy_A 138 FDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE--WYYQIEILKLEIGGQSLNLDC 215 (383)
T ss_dssp HHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB--TTBBCCEEEEEETTEECCCCT
T ss_pred HHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC--ceEEEEEEEEEECCEEccccc
Confidence 67898888888899999852 3579999999864 6799999999986 59999999999999987542
Q ss_pred ----CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCC---CCCCCcccccccCCcccccccccccEEEEEEe
Q 015972 276 ----NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPE---DETLPLCWKGRRPFKNVHDVKKCFRTLALSFT 348 (397)
Q Consensus 276 ----~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~ 348 (397)
...+||||||++++||+++|++|++++.+.... .+... .....+|+.... .....+|+|+|+|+
T Consensus 216 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~---~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~ 286 (383)
T 2ewy_A 216 REYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLI---PEFSDGFWTGSQLACWTNSE------TPWSYFPKISIYLR 286 (383)
T ss_dssp TTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCS---SCCCHHHHHTSEEEEECSSS------CGGGGSCCEEEEEE
T ss_pred cccCCccEEEEcCCccccCCHHHHHHHHHHHhhhccc---ccCccccccccccccccCCc------ccHhhCCcEEEEEC
Confidence 368999999999999999999999999876541 11111 112357986532 11235899999999
Q ss_pred cCC--CCeEEEECCCeeEEEeC---CCcEEEEEEeCCcCCCCCeeEEccccc
Q 015972 349 DGK--TRTLFELTPEAYLIISN---KGNVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 349 g~~--~~~~~~l~p~~yi~~~~---~~~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
|++ ...+++|+|++|+++.. .+..|+++..... .+.||||+++.
T Consensus 287 g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl 335 (383)
T 2ewy_A 287 DENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVM 335 (383)
T ss_dssp CSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHH
T ss_pred CCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHh
Confidence 731 12479999999998863 3568986421111 23699999863
No 30
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.2e-45 Score=372.37 Aligned_cols=293 Identities=18% Similarity=0.210 Sum_probs=224.0
Q ss_pred CeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcc
Q 015972 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (397)
Q Consensus 65 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~~ 144 (397)
+.+|+++|+||||||++.|+|||||+++||+|. +| |. .++.|+|++|+ +++ ...|.|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~Ss------T~~------------~~~~~~ 129 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYR------------DLRKGV 129 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCE------------EEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCC------Ccc------------cCCccE
Confidence 558999999999999999999999999999998 77 53 46899999884 111 135799
Q ss_pred eeeeCCCCeEEEEEEEEEEEeeccCCCcCC-CceEEEeeEecCCCC-CCCCccEEEecCCCCC--------Chhhhhhcc
Q 015972 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLN-PRLALGCGYNQVPGA-SYHPLDGILGLGKGKS--------SIVSQLHSQ 214 (397)
Q Consensus 145 ~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~-~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~~~ql~~~ 214 (397)
.+.|++| .+.|.+++|+|+|+. ...+ .++.|+++......+ .....+||||||+..+ +++.+|.+|
T Consensus 130 ~i~Yg~G-s~~G~~~~Dtv~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 205 (455)
T 3lpj_A 130 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 205 (455)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEeCCe-EEEEEEEEEEEEECC---CcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHc
Confidence 9999999 579999999999963 2222 246788887764433 2356899999998753 577899999
Q ss_pred cccceeeEEeecC------------CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecC-----
Q 015972 215 KLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK----- 275 (397)
Q Consensus 215 ~~i~~~Fs~~l~~------------~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~----- 275 (397)
++|.++||+||.+ ...|.|+||+++. +.|++.|+|+... .||.|.+++|.|+++.+...
T Consensus 206 ~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~ 283 (455)
T 3lpj_A 206 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN 283 (455)
T ss_dssp SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTEECCCCGGGGG
T ss_pred cCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC--ceeEEEEeEEEECCEEccccccccC
Confidence 9998899999963 3579999999874 5789999999986 69999999999999987642
Q ss_pred CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCC--C
Q 015972 276 NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKT--R 353 (397)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~--~ 353 (397)
...+||||||++++||++++++|.++|.+......+..........+|+.... ..+..+|+|+|+|+|... .
T Consensus 284 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~~ 357 (455)
T 3lpj_A 284 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVTNQS 357 (455)
T ss_dssp SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC------CCGGGSCCEEEEEECSSTTEE
T ss_pred CCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccC------CchhcCCcEEEEEcCCCcCce
Confidence 46899999999999999999999999998754211110000122467987542 112358999999998311 1
Q ss_pred eEEEECCCeeEEEeCCC----cEEEEEEeCCcCCCCCeeEEccccc
Q 015972 354 TLFELTPEAYLIISNKG----NVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 354 ~~~~l~p~~yi~~~~~~----~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
.+++|+|++|+++..+. ..|+++..... .+.||||+++.
T Consensus 358 ~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~---~~~~ILG~~fl 400 (455)
T 3lpj_A 358 FRITILPQQYLRPVEDVATSQDDCYKFAISQS---STGTVMGAVIM 400 (455)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEEE---SSCEEECHHHH
T ss_pred EEEEECHHHheEeccCCCCCCceEEEEeccCC---CCcEEEChHHh
Confidence 26999999999987542 48997432221 34799999864
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.3e-45 Score=365.70 Aligned_cols=300 Identities=18% Similarity=0.213 Sum_probs=223.5
Q ss_pred EeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCC
Q 015972 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHN 135 (397)
Q Consensus 56 ~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~ 135 (397)
-+|+++. +.+|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|||++|+ +++
T Consensus 13 ~~l~~~~--~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss------T~~--------- 70 (395)
T 2qp8_A 13 DNLRGKS--GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS------TYR--------- 70 (395)
T ss_dssp TCEEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT------TCE---------
T ss_pred eecCCCC--CceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC------Cce---------
Confidence 3455443 568999999999999999999999999999998 88655 4789998884 111
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCC-ceEEEeeEecCCCCC-CCCccEEEecCCCCC--------
Q 015972 136 CEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGAS-YHPLDGILGLGKGKS-------- 205 (397)
Q Consensus 136 c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~-~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~-------- 205 (397)
...|.|.+.|++| ++.|.+++|+|+|+. +..+. .+.|+++......+. ....+||||||+..+
T Consensus 71 ---~~~~~~~i~Yg~G-s~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~ 143 (395)
T 2qp8_A 71 ---DLRKGVYVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLE 143 (395)
T ss_dssp ---EEEEEEEEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred ---eCCceEEEEECCc-EEEEEEEeEEEEECC---CCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCC
Confidence 1357899999999 569999999999962 22222 366887766533332 356899999998754
Q ss_pred ChhhhhhcccccceeeEEeecC------------CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeE
Q 015972 206 SIVSQLHSQKLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGET 271 (397)
Q Consensus 206 s~~~ql~~~~~i~~~Fs~~l~~------------~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~ 271 (397)
+++.+|.+|+.|+++||+||.+ ...|.|+||++++ +.|++.|+|+... .||.|.+++|+|+++.
T Consensus 144 ~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~ 221 (395)
T 2qp8_A 144 PFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQD 221 (395)
T ss_dssp CHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTEE
T ss_pred CHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC--ceEEEEEEEEEECCEE
Confidence 4667999999888899999964 2579999999864 5689999999876 6999999999999998
Q ss_pred eecC-----CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEE
Q 015972 272 TGLK-----NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALS 346 (397)
Q Consensus 272 ~~~~-----~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~ 346 (397)
+... ...+||||||++++||+++|++|+++|.+......+..........+|+.... .....+|+|+|+
T Consensus 222 ~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~ 295 (395)
T 2qp8_A 222 LKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLY 295 (395)
T ss_dssp CCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC------CCGGGSCCEEEE
T ss_pred cccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccccccccccccccc------chHhhCCcEEEE
Confidence 7542 36899999999999999999999999988754211100000112357987532 122358999999
Q ss_pred EecCCC--CeEEEECCCeeEEEeCC---C-cEEEEEEeCCcCCCCCeeEEccccc
Q 015972 347 FTDGKT--RTLFELTPEAYLIISNK---G-NVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 347 f~g~~~--~~~~~l~p~~yi~~~~~---~-~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
|+|+.. ..+++|+|++|+++..+ + ..|+++..... ...||||+++.
T Consensus 296 f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl 347 (395)
T 2qp8_A 296 LMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS---STGTVMGAVIM 347 (395)
T ss_dssp EECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE---SSCEEECHHHH
T ss_pred EccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC---CCcEEEChHHh
Confidence 998311 13799999999998643 2 48974321111 24699999863
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=9e-45 Score=360.59 Aligned_cols=293 Identities=18% Similarity=0.215 Sum_probs=220.9
Q ss_pred CeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcc
Q 015972 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (397)
Q Consensus 65 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~~c~~~~~~~~ 144 (397)
..+|+++|+||||||++.|+|||||+++||+|. +| |. .++.|+|++|+ +++ ...|.|
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~Ss------T~~------------~~~~~~ 83 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYR------------DLRKGV 83 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCE------------EEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCc------ccc------------cCCCEE
Confidence 458999999999999999999999999999998 78 43 46889999884 111 135799
Q ss_pred eeeeCCCCeEEEEEEEEEEEeeccCCCcCCC-ceEEEeeEecCCCC-CCCCccEEEecCCCC--------CChhhhhhcc
Q 015972 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGA-SYHPLDGILGLGKGK--------SSIVSQLHSQ 214 (397)
Q Consensus 145 ~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~-~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~--------~s~~~ql~~~ 214 (397)
.+.|++| .+.|.+++|+|+|+. ...+. .+.|+++......+ .....+||||||+.. .+++.+|.++
T Consensus 84 ~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 159 (402)
T 3vf3_A 84 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 159 (402)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEECcE-EEEEEEEEEEEEECC---ccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHc
Confidence 9999999 579999999999962 22222 34578877654333 245689999999874 3577899999
Q ss_pred cccceeeEEeecC------------CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeecC-----
Q 015972 215 KLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK----- 275 (397)
Q Consensus 215 ~~i~~~Fs~~l~~------------~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~----- 275 (397)
++|+++||+||.+ ...|.|+||+++. +.|++.|+|+... .||.|.+++|.|+++.+...
T Consensus 160 ~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~ 237 (402)
T 3vf3_A 160 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN 237 (402)
T ss_dssp SCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB--TTBEECEEEEEETTEECCCCGGGGG
T ss_pred cCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC--cEEEEEEeEEEECCEEecccccccC
Confidence 9998899999962 3479999999874 5789999999886 69999999999999987642
Q ss_pred CCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEecCCC--C
Q 015972 276 NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKT--R 353 (397)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~--~ 353 (397)
...+||||||++++||++++++|.+++.+......+..........+|+.... .....+|+|+|+|+|... .
T Consensus 238 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~~ 311 (402)
T 3vf3_A 238 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVTNQS 311 (402)
T ss_dssp SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTC------CCGGGSCCEEEEEECSSTTEE
T ss_pred CCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCcccccccccccccccc------chHhhCCceEEEEecCCCCce
Confidence 46899999999999999999999999998754211111100112467987542 112358999999998311 1
Q ss_pred eEEEECCCeeEEEeCCC----cEEEEEEeCCcCCCCCeeEEccccc
Q 015972 354 TLFELTPEAYLIISNKG----NVCLGILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 354 ~~~~l~p~~yi~~~~~~----~~C~~~~~~~~~~~~~~~IlGdv~~ 395 (397)
.+++|+|++|+++..+. ..|+++..... .+.||||+++.
T Consensus 312 ~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~---~~~~ILG~~fl 354 (402)
T 3vf3_A 312 FRITILPQQYLRPVEDVATSQDDCYKFAISQS---STGTVMGAVIM 354 (402)
T ss_dssp EEEEECHHHHEEECCCGGGTTEEEEEECEEEE---SSCEEECHHHH
T ss_pred EEEEECHHHheehhccCCCCCceEEEEeccCC---CCcEEEChHHh
Confidence 36999999999986532 48997432221 34699999864
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=5.3e-45 Score=354.44 Aligned_cols=276 Identities=20% Similarity=0.234 Sum_probs=216.0
Q ss_pred eEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCC
Q 015972 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHH 134 (397)
Q Consensus 55 ~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~~~~ 134 (397)
.+||... +.+|+++|+||||+|++.|+|||||+++||+|. +.|+|++|+.
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~---------------- 53 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS---------------- 53 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE----------------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc----------------
Confidence 4778753 458999999999999999999999999999875 4699987731
Q ss_pred CCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCCCCCCCccEEEecCCCCC---------
Q 015972 135 NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKS--------- 205 (397)
Q Consensus 135 ~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~--------- 205 (397)
...|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++.... + ...+||||||+..+
T Consensus 54 ----~~~~~~~i~Yg~G-s~~G~~~~Dtv~~g----~~~v~~~~fg~~~~~~~-~--~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 54 ----ATSDKVSVTYGSG-SFSGTEYTDTVTLG----SLTIPKQSIGVASRDSG-F--DGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp ----EEEEEEEEECSSC-EEEEEEEEEEEEET----TEEEEEEEEEEEEEEES-C--TTCSEEEECSCGGGGTTSEESCT
T ss_pred ----ccCceEEEEECCc-EEEEEEEEEEEEEC----CEEEcceEEEEEEccCC-C--cCCCcEEECCccccccccccccc
Confidence 1357999999999 59999999999995 56788999999998643 2 36899999998754
Q ss_pred -----Chhhhhhccccc-ceeeEEeecC-----CCceeEEeCCCCC--CCCCcEEeecccCCC--CceeEEeeEEEECC-
Q 015972 206 -----SIVSQLHSQKLI-RNVVGHCLSG-----GGGGFLFFGDDLY--DSSRVVWTSMSSDYT--KYYSPGVAELFFGG- 269 (397)
Q Consensus 206 -----s~~~ql~~~~~i-~~~Fs~~l~~-----~~~G~l~fG~~~~--~~g~~~~~pl~~~~~--~~y~v~l~~i~v~g- 269 (397)
+++.+|.++++| +++||+||.+ ...|.|+||++++ +.|++.|+|+..... .||.|. .+|.|++
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~ 200 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS 200 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC
Confidence 457889999999 8999999984 2479999999874 679999999998521 799999 9999998
Q ss_pred eEeecCCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCCCCCCCCcccccccCCcccccccccccEEEEEEec
Q 015972 270 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 349 (397)
Q Consensus 270 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g 349 (397)
+.+.. +..+||||||++++||++++++|.+++.+.... . ......+|... ..+|+|+|+|+|
T Consensus 201 ~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~-----~-~g~~~~~C~~~-----------~~~p~i~f~f~g 262 (340)
T 1wkr_A 201 TSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVADN-----N-TGLLRLTTAQY-----------ANLQSLFFTIGG 262 (340)
T ss_dssp EEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT-----T-TSSEEECHHHH-----------HTCCCEEEEETT
T ss_pred eEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC-----C-CCeEEeecccc-----------ccCCcEEEEECC
Confidence 77743 468999999999999999999998877543321 1 11123458643 247999999987
Q ss_pred CCCCeEEEECCCeeEEEeC-------CCcEEE-EEEeCCcC-CCCCeeEEccccc
Q 015972 350 GKTRTLFELTPEAYLIISN-------KGNVCL-GILNGAEV-GLQDLNVIGGIGD 395 (397)
Q Consensus 350 ~~~~~~~~l~p~~yi~~~~-------~~~~C~-~~~~~~~~-~~~~~~IlGdv~~ 395 (397)
.+++|+|++|+++.. +...|+ ++...... +.+..||||+++.
T Consensus 263 ----~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl 313 (340)
T 1wkr_A 263 ----QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFL 313 (340)
T ss_dssp ----EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHH
T ss_pred ----EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhh
Confidence 999999999998643 123565 56553321 1234699999753
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-42 Score=319.51 Aligned_cols=219 Identities=20% Similarity=0.315 Sum_probs=184.2
Q ss_pred eEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC---CCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 015972 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (397)
Q Consensus 55 ~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~---~C~~~~~~~f~p~~S~~~C~s~~C~~~~~~ 131 (397)
.+||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. .|. .|.. ++.|+|++|+ +++.
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~---- 68 (239)
T 1b5f_A 4 VVALTN--DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACRA--HSMYESSDSS------TYKE---- 68 (239)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHHT--SCCBCGGGCT------TCEE----
T ss_pred eeeeee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccCC--CCCCCCccCC------Ceee----
Confidence 477764 34789999999999999999999999999999999 896 5874 5789998884 1221
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCCC--hh
Q 015972 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS--IV 208 (397)
Q Consensus 132 ~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s--~~ 208 (397)
..|.|.+.|++| .+.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+..++ ++
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 69 --------NGTFGAIIYGTG-SITGFFSQDSVTIG----DLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHH
T ss_pred --------CCcEEEEEECCC-cEEEEEEEEEEEEC----CcEEccEEEEEEEeccCccccccCcceEEecCccccccHHH
Confidence 356899999999 58999999999995 567889999999876322 344568999999999876 55
Q ss_pred hhhhccccc-ceeeEEeecC----CCceeEEeCCCCC--CCCCcEEeecccCCCCceeEEeeEEEECCeEeec--CCCCE
Q 015972 209 SQLHSQKLI-RNVVGHCLSG----GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL--KNLPV 279 (397)
Q Consensus 209 ~ql~~~~~i-~~~Fs~~l~~----~~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~--~~~~~ 279 (397)
.+|.++++| +++||+||.+ ...|.|+||++++ +.+++.|+|+... .||.|.+++|.|+++.+.. ....+
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~a 213 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ--YYWQFGIGDVLIGDKSTGFCAPGCQA 213 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE--TTEEEEECCEEETTEECCTTTTCEEE
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC--CeEEEEeeEEEECCEEecccCCCCEE
Confidence 778899988 8999999985 3579999999874 4689999999876 5999999999999998754 24689
Q ss_pred EEcCCCcceecCHHHHHHHHHHHH
Q 015972 280 VFDSGSSYTYLNRVTYQTLTSIMK 303 (397)
Q Consensus 280 iiDSGTs~~~lp~~~~~~l~~~i~ 303 (397)
||||||++++||++++++|.++|.
T Consensus 214 iiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 214 FADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EECTTCSSEEECHHHHHHHHHHTT
T ss_pred EEecCcchhhCCHHHHHHHHHHhC
Confidence 999999999999999999998874
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.96 E-value=1e-29 Score=234.87 Aligned_cols=200 Identities=19% Similarity=0.243 Sum_probs=156.9
Q ss_pred CcCCCceEEEeeEecCCC-CCCCCccEEEecCCCCC------Chhhhhhccccc-ceeeEEeecCCC----ceeEEeCCC
Q 015972 171 QRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------SIVSQLHSQKLI-RNVVGHCLSGGG----GGFLFFGDD 238 (397)
Q Consensus 171 ~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~l~~~~----~G~l~fG~~ 238 (397)
+..++++.|||++.+.+. +.....+||||||++.+ +++++|.++++| +++||+||.+.. .|.|+||++
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 456788999999987543 44567899999999764 467899999999 899999998542 899999998
Q ss_pred CC--CCCCcEEeecccCCCCceeEEeeEEEECCeEee-cCCCCEEEcCCCcceecCHHHHHHHHHHHHHHhccCCCccCC
Q 015972 239 LY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTG-LKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAP 315 (397)
Q Consensus 239 ~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~-~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~ 315 (397)
+. +.+++.|+|+... .||.|.+++|+|+++.+. ..+..+||||||++++||++++++|.+++.+....
T Consensus 82 d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~------- 152 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRK--AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLI------- 152 (241)
T ss_dssp CGGGEEEEEEEEECSSB--TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-------
T ss_pred CHHHcCCceEEEECccc--cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeecc-------
Confidence 75 4689999999876 699999999999998743 34568999999999999999999999988543221
Q ss_pred CCCCCCcccccccCCcccccccccccEEEEEEecCCCCeEEEECCCeeEEEeCC--CcEEEE-EEeCCcC-CCCCeeEEc
Q 015972 316 EDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK--GNVCLG-ILNGAEV-GLQDLNVIG 391 (397)
Q Consensus 316 ~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~--~~~C~~-~~~~~~~-~~~~~~IlG 391 (397)
...+..+|+... .+|+|+|+|+| ++++|+|++|+++..+ +..|+. +...... +..+.||||
T Consensus 153 ~g~~~~~C~~~~-----------~~p~i~f~f~g----~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG 217 (241)
T 1lya_B 153 QGEYMIPCEKVS-----------TLPAITLKLGG----KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILG 217 (241)
T ss_dssp TTEEEEEGGGGG-----------GSCCEEEEETT----EEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEEC
T ss_pred CCcEEEECCCCc-----------cCCeEEEEECC----EEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEec
Confidence 112234687632 48999999976 9999999999998753 468995 6654321 124589999
Q ss_pred ccc
Q 015972 392 GIG 394 (397)
Q Consensus 392 dv~ 394 (397)
+++
T Consensus 218 ~~f 220 (241)
T 1lya_B 218 DVF 220 (241)
T ss_dssp HHH
T ss_pred hHH
Confidence 975
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.85 E-value=1.2e-21 Score=154.47 Aligned_cols=88 Identities=22% Similarity=0.407 Sum_probs=74.5
Q ss_pred eEeeeecccCCeeEEEEEEeCCCCcEEEEEEEcCCCceEEecCCCCC----CCCCCCCCCCCCCCCCCCCCCccccccCC
Q 015972 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (397)
Q Consensus 55 ~~pl~g~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~~~c~----~C~~~~~~~f~p~~S~~~C~s~~C~~~~~ 130 (397)
.+||.. +.+.+|+++|.||||||++.|+|||||+++||+|. .|. .|.. ++.|||++|+ +++.
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~~--~~~y~p~~Ss------T~~~--- 69 (97)
T 1lya_A 4 PEVLKN--YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACWI--HHKYNSDKSS------TYVK--- 69 (97)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHHT--SCCBCGGGCT------TCEE---
T ss_pred eEeeEE--CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccCC--CCCCCchhCC------Ccee---
Confidence 477763 24779999999999999999999999999999999 897 6874 6899999884 1211
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEee
Q 015972 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFN 166 (397)
Q Consensus 131 ~~~~~c~~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~~ 166 (397)
..|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 70 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 70 ---------NGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp ---------EEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred ---------CCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 3579999999995 9999999999996
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.13 E-value=1.6e-06 Score=66.19 Aligned_cols=53 Identities=21% Similarity=0.372 Sum_probs=39.9
Q ss_pred cccEEEEEEecCCCCeEEEECCCeeEEEeCC--CcEEEE-EEeCCcCCCCCeeEEccccc
Q 015972 339 CFRTLALSFTDGKTRTLFELTPEAYLIISNK--GNVCLG-ILNGAEVGLQDLNVIGGIGD 395 (397)
Q Consensus 339 ~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~--~~~C~~-~~~~~~~~~~~~~IlGdv~~ 395 (397)
.+|+|+|+|+| ++++|+|++|+++... +..|++ +......+.++.|||||++.
T Consensus 12 ~~P~i~f~~gg----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl 67 (87)
T 1b5f_B 12 SMPNVSFTIGG----KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFM 67 (87)
T ss_dssp GCCCEEEEETT----EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHH
T ss_pred cCCcEEEEECC----EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHh
Confidence 48999999986 9999999999998643 368995 65543111245899999863
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=84.36 E-value=1 Score=34.88 Aligned_cols=25 Identities=32% Similarity=0.440 Sum_probs=22.7
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceEEe
Q 015972 69 NVTMYIGQPARPYFLDLDTGSDLTWLQ 95 (397)
Q Consensus 69 ~~~i~iGTP~Q~~~v~~DTGSs~~Wv~ 95 (397)
++.|.|| .|.+.+++|||++++-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 6789998 599999999999999997
No 39
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=84.12 E-value=1.1 Score=34.36 Aligned_cols=27 Identities=37% Similarity=0.263 Sum_probs=23.6
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 69 ~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
++.|.|| .|.+.+++|||++++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5779998 49999999999999998754
No 40
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=83.69 E-value=1 Score=35.24 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=24.7
Q ss_pred EEEEEeC---CCCcEEEEEEEcCCCceEEecC
Q 015972 69 NVTMYIG---QPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 69 ~~~i~iG---TP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
.+.|.|| +|+|.+..++|||.+++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4566665 8899999999999999999865
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.71 E-value=1.6 Score=33.34 Aligned_cols=27 Identities=37% Similarity=0.390 Sum_probs=23.5
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 69 ~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
++.|.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 6779998 59999999999999998654
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=79.02 E-value=1.7 Score=35.48 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=26.5
Q ss_pred CeeEEEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 65 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
.+.+++++.|+ .+++.+++|||++.+-+...
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCHH
Confidence 56789999998 48999999999999888643
No 43
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=75.15 E-value=2.7 Score=33.08 Aligned_cols=24 Identities=33% Similarity=0.555 Sum_probs=21.5
Q ss_pred EEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 72 MYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 72 i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
|.|| .|.+..++|||.+++-+...
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EEEC--CEEEEEEecCCCCcEEEccc
Confidence 8998 59999999999999998754
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=73.02 E-value=3.7 Score=32.14 Aligned_cols=27 Identities=19% Similarity=0.463 Sum_probs=23.7
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 69 ~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
.+.|.|| .|.+..++|||.+++-+...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 5678898 59999999999999999765
No 45
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=71.90 E-value=4.4 Score=32.95 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=24.3
Q ss_pred EEEECCeEeecCCCCEEEcCCCcceecCHHHHHHH
Q 015972 264 ELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTL 298 (397)
Q Consensus 264 ~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~~~~l 298 (397)
.+.+||+.+. ++||||.+.+.++.+..+.+
T Consensus 30 ~v~InG~~~~-----~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 30 NIEINNYPVK-----AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEEETTEEEE-----EEECTTCSSCEEEHHHHHHH
T ss_pred EEEECCEEEE-----EEEECCCCccccCHHHHHHc
Confidence 3678888544 99999999999998877654
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=69.12 E-value=4.6 Score=33.18 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=24.3
Q ss_pred EEECCeEeecCCCCEEEcCCCcceecCHHHHHHH
Q 015972 265 LFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTL 298 (397)
Q Consensus 265 i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~~~~l 298 (397)
+.+||+.+. ++||||.+.+.++.+.++++
T Consensus 29 ~~Ing~~v~-----~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPLK-----AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEEE-----EEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEEE-----EEEeCCCCcEeeCHHHHHHc
Confidence 457887654 89999999999999988765
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=68.80 E-value=4.1 Score=33.47 Aligned_cols=31 Identities=13% Similarity=0.233 Sum_probs=26.5
Q ss_pred CeeEEEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 65 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
...|++++.|. .+++++++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 34689999997 59999999999999998754
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=60.09 E-value=8.4 Score=30.96 Aligned_cols=28 Identities=25% Similarity=0.428 Sum_probs=23.7
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 68 YNVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 68 Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
-++.+.|+ .|.+..++|||.+++-+...
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 46778888 49999999999999988754
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=56.49 E-value=9.6 Score=32.98 Aligned_cols=28 Identities=36% Similarity=0.199 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 68 YNVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 68 Y~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
-.++|.|| .|.+..++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 36789999 59999999999999988644
No 50
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=56.31 E-value=13 Score=27.97 Aligned_cols=38 Identities=26% Similarity=0.395 Sum_probs=24.8
Q ss_pred eecccCCCCceeEEeeEEEECC--eEeecCCCCEEEcCCCcceecCHH
Q 015972 248 TSMSSDYTKYYSPGVAELFFGG--ETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 248 ~pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
.||.......|.+ .|.||. +.+ .++||||++.+++|..
T Consensus 5 ~~l~n~~~~~Y~~---~i~iGTP~Q~~-----~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNYMDAQYYG---EIGIGTPPQCF-----TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEETTTEEEE---EEEETTTTEEE-----EEEEETTCCCEEEEBT
T ss_pred EeeEECCCCeEEE---EEEECCCCeEE-----EEEEeCCCCceEEeEc
Confidence 5554322244544 467773 333 4999999999999865
No 51
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=55.42 E-value=9.5 Score=30.28 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=18.6
Q ss_pred eCCCCcEEEEEEEcCCCceEEecC
Q 015972 74 IGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 74 iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
|| .|.+..++|||.+++-+...
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETT
T ss_pred CC--CEEEEEEecCCCCcEEEecc
Confidence 55 47889999999999999865
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=35.82 E-value=32 Score=29.68 Aligned_cols=27 Identities=37% Similarity=0.226 Sum_probs=23.4
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceEEecC
Q 015972 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 69 ~~~i~iGTP~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
.+++.||- |.+..++|||.+++-+...
T Consensus 114 ~~~iki~G--q~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIGG--QLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred cEEEEECC--EEEeeeecccCCceeeecc
Confidence 67899984 9999999999999988644
No 53
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=35.17 E-value=42 Score=29.30 Aligned_cols=40 Identities=20% Similarity=0.145 Sum_probs=26.9
Q ss_pred eeEeeeecccCCeeEEEE---EEeCCC-----CcEEEEEEEcCCCceEEecC
Q 015972 54 LLFQVHGNVYPTGYYNVT---MYIGQP-----ARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 54 ~~~pl~g~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
.-+|+... +.|.++ |.||.- .....++||||++++++|..
T Consensus 180 ~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 180 TYVPVTYQ----YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEEEE----TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEEcccC----CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 34566432 346554 677752 34578999999999999854
No 54
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=34.30 E-value=46 Score=31.02 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=30.5
Q ss_pred CCCcEEeecccCCCCceeEEeeEEEEC--CeEeecCCCCEEEcCCCcceecCHH
Q 015972 242 SSRVVWTSMSSDYTKYYSPGVAELFFG--GETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 242 ~g~~~~~pl~~~~~~~y~v~l~~i~v~--g~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
.|.+...|+.......|.+ .|.|| .+.+ .++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTPGQDF-----YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTTTEEE-----EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCCCcEE-----EEEEcCCCCCeEECCC
Confidence 3566778887643345654 46787 4443 4999999999999865
No 55
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=32.81 E-value=45 Score=30.58 Aligned_cols=42 Identities=24% Similarity=0.343 Sum_probs=28.5
Q ss_pred CCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCHHH
Q 015972 243 SRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVT 294 (397)
Q Consensus 243 g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~ 294 (397)
|.+...|+... ..|.+ .|.+|.+.+ .++||||++.+++|..-
T Consensus 4 g~v~~~~~~~~--~~Y~~---~i~iG~Q~~-----~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 4 GVATNTPTAND--EEYIT---PVTIGGTTL-----NLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEEECGGG--SCEEE---EEEETTEEE-----EEEEETTCCCEEECBTT
T ss_pred CceeeeecCCC--CEEEE---EEEECCEEE-----EEEEeCCCcceEEecCC
Confidence 34455665544 45654 467885443 49999999999999753
No 56
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=32.52 E-value=49 Score=30.27 Aligned_cols=42 Identities=21% Similarity=0.426 Sum_probs=28.1
Q ss_pred CcEEeecccCCCCceeEEeeEEEECC--eEeecCCCCEEEcCCCcceecCHH
Q 015972 244 RVVWTSMSSDYTKYYSPGVAELFFGG--ETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 244 ~~~~~pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
++...||.......|.+ .|.+|. +.+ .++||||++.+++|..
T Consensus 2 ~~~~~~l~n~~~~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFG---KIYLGTPPQEF-----TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETTTEEEE---EEEETTTTEEE-----EEEEETTCCCEEEEBT
T ss_pred CcceeeeEeccCCEEEE---EEEECCCCeEE-----EEEEeCCccceEEcCC
Confidence 45566776633245554 466774 333 4999999999999865
No 57
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=32.43 E-value=40 Score=25.70 Aligned_cols=34 Identities=15% Similarity=0.288 Sum_probs=27.1
Q ss_pred ceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCHHHH
Q 015972 257 YYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTY 295 (397)
Q Consensus 257 ~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~~ 295 (397)
.|+=.+..+.++|+.+. +++|||.-.+.+.....
T Consensus 5 l~~RP~v~v~I~Gq~~e-----~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPLN-----VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEEE-----EEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEEE-----EEeccCCCcEEEccccC
Confidence 45555667999998654 89999999999998765
No 58
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=31.42 E-value=51 Score=30.27 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=28.6
Q ss_pred ceeEeeeecccCCeeEEEE---EEeCC---CCcEEEEEEEcCCCceEEecC
Q 015972 53 SLLFQVHGNVYPTGYYNVT---MYIGQ---PARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~~---i~iGT---P~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
..-+|+..+ .+.|.++ |.||. +.....++||||++++++|..
T Consensus 183 l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 183 VAYTPVDNS---QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EEEEECBCT---TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred eEEEEccCC---CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 344666421 3356555 56775 246789999999999999864
No 59
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=31.27 E-value=41 Score=25.40 Aligned_cols=31 Identities=16% Similarity=0.413 Sum_probs=24.8
Q ss_pred ceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCH
Q 015972 257 YYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (397)
Q Consensus 257 ~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~ 292 (397)
.|+=++..++++|+.+. +++|||.-.+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~e-----aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE-----ALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE-----EEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEEE-----EEeccCCCcEEEec
Confidence 45556677999998764 89999999988774
No 60
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=30.77 E-value=46 Score=30.55 Aligned_cols=41 Identities=24% Similarity=0.286 Sum_probs=27.5
Q ss_pred CcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCHHH
Q 015972 244 RVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVT 294 (397)
Q Consensus 244 ~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~ 294 (397)
.+..+|+... ..|.+ .|.+|.+.+ .++||||++.+++|..-
T Consensus 4 ~v~~~~~~~~--~~Y~~---~i~iG~Q~~-----~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 4 SAVTTPQNND--EEYLT---PVTVGKSTL-----HLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEECTTT--SCEEE---EEEEBTEEE-----EEEEETTCCCEEEECTT
T ss_pred eEEeEEcCCC--CEEEE---EEEECCEEE-----EEEEeCCCccceEeeCC
Confidence 4445555433 45654 466774443 49999999999999754
No 61
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=30.58 E-value=51 Score=30.21 Aligned_cols=42 Identities=24% Similarity=0.340 Sum_probs=28.2
Q ss_pred CCcEEeecccCCCCceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCHHH
Q 015972 243 SRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVT 294 (397)
Q Consensus 243 g~~~~~pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~ 294 (397)
+.+...|+... ..|.+ .|.+|.+.+ .++||||++.+++|..-
T Consensus 4 ~~v~~~~~~~~--~~Y~~---~i~iG~q~~-----~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSND--EEYIT---QVTVGDDTL-----GLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGG--CCEEE---EEEETTEEE-----EEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCC--CEEEE---EEEECCEEE-----EEEEcCCCcceEEecCC
Confidence 34455565543 45654 467874443 49999999999999754
No 62
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=28.61 E-value=47 Score=28.82 Aligned_cols=27 Identities=19% Similarity=0.108 Sum_probs=21.1
Q ss_pred EEEeCCC----CcEEEEEEEcCCCceEEecC
Q 015972 71 TMYIGQP----ARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 71 ~i~iGTP----~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
.|+||.- .....+++|||++.+++|..
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 5678752 34578999999999999865
No 63
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=27.02 E-value=53 Score=24.80 Aligned_cols=29 Identities=17% Similarity=0.440 Sum_probs=23.8
Q ss_pred ceeEEeeEEEECCeEeecCCCCEEEcCCCcceec
Q 015972 257 YYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 290 (397)
Q Consensus 257 ~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~l 290 (397)
.|+=.+..+.++|+.+. +++|||.--+.+
T Consensus 5 l~~RP~vti~I~Gq~~e-----~LLDTGAD~TVl 33 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE-----VLLDTGADDSIV 33 (99)
T ss_dssp SSSCCEEEEEETTEEEE-----EEECTTCSSCEE
T ss_pred cccCCeEEEEECCEEEE-----EEEecCCCceEE
Confidence 56666778999998765 899999988887
No 64
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=26.76 E-value=54 Score=25.52 Aligned_cols=31 Identities=29% Similarity=0.492 Sum_probs=25.4
Q ss_pred CceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCH
Q 015972 256 KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (397)
Q Consensus 256 ~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~ 292 (397)
..|+=.+. ++++|+.+. +++|||.-.+.+.+
T Consensus 10 ~l~~rP~v-ikI~Gq~~e-----aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK-----FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE-----EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE-----EEecCCCCcEEEcc
Confidence 46776777 999998764 89999999988775
No 65
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=25.10 E-value=82 Score=28.75 Aligned_cols=42 Identities=21% Similarity=0.357 Sum_probs=27.5
Q ss_pred ceeEeeeecccCCeeEEE---EEEeCCC--CcEEEEEEEcCCCceEEecC
Q 015972 53 SLLFQVHGNVYPTGYYNV---TMYIGQP--ARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~---~i~iGTP--~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
..-+|+..+ .+.|.+ .|.||.+ .....++||||++++++|..
T Consensus 183 l~~~p~~~~---~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 183 LTTVPIDNS---RGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp CEEEECBCT---TSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred eEEEEccCC---CCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 345666421 234544 4677762 34568999999999999864
No 66
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=24.94 E-value=56 Score=26.05 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=22.4
Q ss_pred EeeEEEECCeEeecCCCCEEEcCCCcceecCHH
Q 015972 261 GVAELFFGGETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 261 ~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
.+..+.++|+.+. +++|||...+.|+..
T Consensus 23 P~v~i~I~G~~~~-----~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVGGQPVT-----FLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEETTEEEE-----EEECTTCSSCEECSC
T ss_pred CEEEEEECCEEEE-----EEEeCCCCeEEEccc
Confidence 3456889998654 899999999998864
No 67
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=24.02 E-value=1e+02 Score=28.08 Aligned_cols=42 Identities=19% Similarity=0.235 Sum_probs=27.9
Q ss_pred ceeEeeeecccCCeeEEE---EEEeCCC---CcEEEEEEEcCCCceEEecC
Q 015972 53 SLLFQVHGNVYPTGYYNV---TMYIGQP---ARPYFLDLDTGSDLTWLQCD 97 (397)
Q Consensus 53 ~~~~pl~g~~~~~~~Y~~---~i~iGTP---~Q~~~v~~DTGSs~~Wv~~~ 97 (397)
..-+|+..+ .+.|.+ .|.||.- .....++||||++++++|..
T Consensus 182 l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 182 ITYTAVSTK---QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp CEEEECBCT---TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred eEEEEccCC---CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 344666421 234544 4678762 34678999999999999864
No 68
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=23.02 E-value=79 Score=28.96 Aligned_cols=37 Identities=24% Similarity=0.441 Sum_probs=24.8
Q ss_pred eecccCCCCceeEEeeEEEEC--CeEeecCCCCEEEcCCCcceecCHH
Q 015972 248 TSMSSDYTKYYSPGVAELFFG--GETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 248 ~pl~~~~~~~y~v~l~~i~v~--g~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
.|+.... ..|.+ .|.+| .+.+ .++||||++.+++|..
T Consensus 5 ~~l~~~~-~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEG-PSYAA---DIVVGSNQQKQ-----TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECS-SSEEE---EEEETTTTEEE-----EEEEETTCCCEEEEEE
T ss_pred EEEecCC-cEEEE---EEEEcCCCcEE-----EEEEcCCCCCEEEecC
Confidence 4555443 45655 46677 3433 4999999999999854
No 69
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=22.92 E-value=55 Score=30.79 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=22.7
Q ss_pred eecccCCC-CceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCH
Q 015972 248 TSMSSDYT-KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (397)
Q Consensus 248 ~pl~~~~~-~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~ 292 (397)
+||.+... ..|.+. |.+|.. ++||||++.+++|-
T Consensus 5 ~pv~~~~~~~~Y~~~---i~iGtP--------v~~DTGSs~lWv~c 39 (381)
T 1t6e_X 5 APVTKDPATSLYTIP---FHDGAS--------LVLDVAGPLVWSTC 39 (381)
T ss_dssp EEEEECTTTCCEEEE---EETTEE--------EEEETTCCCEEECC
T ss_pred EeEEecCCCcEEEEE---EeCCCE--------EEEECCCCceEEeC
Confidence 46653322 455543 556542 99999999999994
No 70
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=22.79 E-value=80 Score=28.90 Aligned_cols=38 Identities=21% Similarity=0.319 Sum_probs=25.8
Q ss_pred EeecccCCCCceeEEeeEEEECC--eEeecCCCCEEEcCCCcceecCHH
Q 015972 247 WTSMSSDYTKYYSPGVAELFFGG--ETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 247 ~~pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
-+||.... .+|.+ .|.||. +.+ .++||||++.+++|..
T Consensus 4 ~~~l~~~~-~~Y~~---~i~iGtP~Q~~-----~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 4 SLSLINEG-PSYAS---KVSVGSNKQQQ-----TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEEECS-SSEEE---EEEETTTTEEE-----EEEEETTCCCEEEEEE
T ss_pred eeEEEcCC-CEEEE---EEEEcCCCcEE-----EEEEeCCCCceEEecC
Confidence 35666554 55655 466774 333 4899999999999854
No 71
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=22.54 E-value=89 Score=28.66 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=24.3
Q ss_pred eecccCCCCceeEEeeEEEECC--eEeecCCCCEEEcCCCcceecCH
Q 015972 248 TSMSSDYTKYYSPGVAELFFGG--ETTGLKNLPVVFDSGSSYTYLNR 292 (397)
Q Consensus 248 ~pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~iiDSGTs~~~lp~ 292 (397)
+||.... ..|.+ .|.||. +.+ .++||||++.+++|.
T Consensus 5 ~~l~n~~-~~Y~~---~i~iGTP~q~~-----~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 5 VPATNQL-VDYVV---NVGVGSPATTY-----SLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEECS-SCEEE---EEEETTTTEEE-----EEEEETTCCCCEECS
T ss_pred EeeeccC-cEEEE---EEEECCCCcEE-----EEEEeCCChhheecC
Confidence 4555443 45554 467773 333 499999999999985
No 72
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=20.99 E-value=94 Score=30.36 Aligned_cols=53 Identities=15% Similarity=0.292 Sum_probs=39.9
Q ss_pred cccEEEEEEecCCCCeEEEECCCeeEEEeCC--CcEEEE-EEeCCcC-CCCCeeEEccccc
Q 015972 339 CFRTLALSFTDGKTRTLFELTPEAYLIISNK--GNVCLG-ILNGAEV-GLQDLNVIGGIGD 395 (397)
Q Consensus 339 ~~P~i~f~f~g~~~~~~~~l~p~~yi~~~~~--~~~C~~-~~~~~~~-~~~~~~IlGdv~~ 395 (397)
.+|+|+|+|+| ++|+|+|++|+++..+ +..|++ +...+.. ..++.|||||++.
T Consensus 402 ~lP~i~f~~gg----~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl 458 (478)
T 1qdm_A 402 SMPDIEFTIGG----KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFM 458 (478)
T ss_dssp TCCCEEEEETT----EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHH
T ss_pred ccccEEEEECC----EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHh
Confidence 48999999986 9999999999998754 358996 5543311 1246899999863
No 73
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=20.93 E-value=93 Score=29.40 Aligned_cols=41 Identities=17% Similarity=0.103 Sum_probs=25.8
Q ss_pred EeecccCC-CCceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCHH
Q 015972 247 WTSMSSDY-TKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 247 ~~pl~~~~-~~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
..||..+. ...|.+ .|.||.-.- ...++||||++.+++|..
T Consensus 11 ~~pl~~~~~~~~Y~~---~i~iGTP~Q---~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGSTGLHWA---NLQKRTPLM---QVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTTCCEEE---EEEETTTTE---EEEEEEETTCSSEEEECS
T ss_pred EEeeecCCCCceEEE---EEECCCCCc---eeEEEEECCCCceeECCC
Confidence 46776332 145554 466774211 235999999999999854
No 74
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=20.71 E-value=67 Score=29.46 Aligned_cols=30 Identities=23% Similarity=0.223 Sum_probs=21.9
Q ss_pred CceeEEeeEEEECCeEeecCCCCEEEcCCCcceecCHH
Q 015972 256 KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 256 ~~y~v~l~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
..|.+ .|.+|.+.+ .++||||++.+++|..
T Consensus 17 ~~Y~~---~i~iG~Q~~-----~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAG---ITKIGNQNF-----LTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEE---EEEETTEEE-----EEEEETTCCCEEEECT
T ss_pred CEEEE---EEEECCEEE-----EEEEeCCCcceEEecC
Confidence 35544 477884443 4999999999999864
No 75
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=20.04 E-value=1.2e+02 Score=27.68 Aligned_cols=37 Identities=19% Similarity=0.411 Sum_probs=24.6
Q ss_pred eecccCCCCceeEEeeEEEEC--CeEeecCCCCEEEcCCCcceecCHH
Q 015972 248 TSMSSDYTKYYSPGVAELFFG--GETTGLKNLPVVFDSGSSYTYLNRV 293 (397)
Q Consensus 248 ~pl~~~~~~~y~v~l~~i~v~--g~~~~~~~~~~iiDSGTs~~~lp~~ 293 (397)
+|+.... ..|.+ .|.+| .+.+ .++||||++.+++|..
T Consensus 5 ~~l~~~~-~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 5 VTLHNEA-ITYTA---DITVGSDNQKL-----NVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEECS-SCEEE---EEEETTTTEEE-----EEEEETTCCCEEEEEE
T ss_pred EEEecCC-eEEEE---EEEECCCCcEE-----EEEEeCCCCCeEEecC
Confidence 4555433 45654 46677 3443 4999999999999854
Done!