Query 015976
Match_columns 397
No_of_seqs 180 out of 1626
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:47:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015976.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015976hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sza_A Aldehyde dehydrogenase, 100.0 2.8E-86 9.7E-91 669.2 38.3 359 10-374 107-468 (469)
2 2wme_A BADH, betaine aldehyde 100.0 8.3E-85 2.8E-89 660.3 38.4 341 13-356 132-483 (490)
3 3iwj_A Putative aminoaldehyde 100.0 1.1E-82 3.9E-87 648.5 38.6 342 13-357 141-490 (503)
4 3ed6_A Betaine aldehyde dehydr 100.0 1.4E-82 5E-87 648.8 37.6 340 14-356 161-510 (520)
5 3ros_A NAD-dependent aldehyde 100.0 1.6E-82 5.4E-87 643.7 35.9 341 13-357 113-459 (484)
6 4f3x_A Putative aldehyde dehyd 100.0 1.2E-82 4E-87 646.8 35.0 340 13-355 151-496 (498)
7 3ifg_A Succinate-semialdehyde 100.0 9.1E-83 3.1E-87 645.9 33.6 340 13-355 138-483 (484)
8 3ek1_A Aldehyde dehydrogenase; 100.0 1.2E-82 4.1E-87 647.1 32.6 339 14-356 159-502 (504)
9 3r31_A BADH, betaine aldehyde 100.0 1.1E-82 3.7E-87 649.3 32.3 344 17-363 144-495 (517)
10 3u4j_A NAD-dependent aldehyde 100.0 4.3E-82 1.5E-86 646.4 36.4 342 13-357 151-499 (528)
11 3rh9_A Succinate-semialdehyde 100.0 3.2E-82 1.1E-86 644.3 34.9 341 13-356 136-484 (506)
12 1wnd_A Putative betaine aldehy 100.0 9.1E-82 3.1E-86 639.8 37.0 339 14-355 150-494 (495)
13 2o2p_A Formyltetrahydrofolate 100.0 6.1E-82 2.1E-86 643.8 34.5 337 16-355 171-516 (517)
14 3b4w_A Aldehyde dehydrogenase; 100.0 7.3E-82 2.5E-86 640.9 34.6 336 16-355 139-481 (495)
15 4e4g_A Methylmalonate-semialde 100.0 9.9E-82 3.4E-86 642.8 35.3 341 14-356 153-505 (521)
16 1bxs_A Aldehyde dehydrogenase; 100.0 1.5E-81 5.1E-86 639.1 36.3 340 14-356 150-496 (501)
17 3k2w_A Betaine-aldehyde dehydr 100.0 7.8E-82 2.7E-86 641.5 34.0 342 13-357 138-489 (497)
18 3i44_A Aldehyde dehydrogenase; 100.0 2.4E-81 8.3E-86 637.0 37.5 335 14-353 151-495 (497)
19 1a4s_A ALDH, betaine aldehyde 100.0 2.1E-81 7.1E-86 638.8 36.9 340 14-356 146-496 (503)
20 3jz4_A Succinate-semialdehyde 100.0 2.3E-81 7.8E-86 636.4 36.8 340 13-355 135-480 (481)
21 3lns_A Benzaldehyde dehydrogen 100.0 3.1E-81 1E-85 631.7 36.9 342 7-355 114-456 (457)
22 1o04_A Aldehyde dehydrogenase, 100.0 1.1E-81 3.7E-86 640.0 33.8 340 14-356 149-495 (500)
23 3prl_A NADP-dependent glyceral 100.0 1.1E-81 3.8E-86 640.6 33.1 336 15-356 144-483 (505)
24 2d4e_A 5-carboxymethyl-2-hydro 100.0 6E-81 2.1E-85 637.1 38.3 339 14-356 153-505 (515)
25 3qan_A 1-pyrroline-5-carboxyla 100.0 1.6E-81 5.4E-86 643.6 34.0 341 14-356 163-516 (538)
26 2imp_A Lactaldehyde dehydrogen 100.0 6.7E-81 2.3E-85 632.6 37.5 339 14-355 133-478 (479)
27 3r64_A NAD dependent benzaldeh 100.0 8.1E-81 2.8E-85 635.6 36.9 340 14-357 139-486 (508)
28 3etf_A Putative succinate-semi 100.0 7.9E-81 2.7E-85 630.1 35.1 340 14-356 117-461 (462)
29 2ve5_A BADH, betaine aldehyde 100.0 2E-80 6.8E-85 631.2 37.9 341 13-356 132-483 (490)
30 3pqa_A Lactaldehyde dehydrogen 100.0 6.3E-81 2.1E-85 632.3 33.7 335 14-356 121-464 (486)
31 4h7n_A Aldehyde dehydrogenase; 100.0 8E-81 2.8E-85 631.3 34.1 349 15-365 118-472 (474)
32 1uxt_A Glyceraldehyde-3-phosph 100.0 1.1E-80 3.7E-85 633.2 33.9 335 16-356 150-492 (501)
33 2w8n_A Succinate-semialdehyde 100.0 7.5E-81 2.6E-85 632.8 31.4 340 13-355 136-485 (487)
34 2j6l_A Aldehyde dehydrogenase 100.0 2.3E-80 7.8E-85 631.1 34.7 338 16-355 150-498 (500)
35 1uzb_A 1-pyrroline-5-carboxyla 100.0 3.7E-80 1.3E-84 631.8 36.2 340 14-355 164-515 (516)
36 4dng_A Uncharacterized aldehyd 100.0 3E-80 1E-84 629.1 33.2 339 14-356 134-478 (485)
37 1euh_A NADP dependent non phos 100.0 1E-79 3.4E-84 623.4 33.2 334 15-355 134-473 (475)
38 1t90_A MMSDH, probable methylm 100.0 1.7E-79 5.7E-84 623.1 34.0 340 14-356 132-480 (486)
39 3ty7_A Putative aldehyde dehyd 100.0 1.2E-79 4.1E-84 623.6 30.5 336 15-354 131-475 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 3.5E-78 1.2E-82 620.3 33.2 349 16-367 193-561 (563)
41 3ju8_A Succinylglutamic semial 100.0 5.2E-76 1.8E-80 598.0 34.0 334 14-356 130-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 6.6E-76 2.3E-80 634.5 33.8 344 13-357 656-1011(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 1.2E-75 4.1E-80 601.2 27.7 337 16-356 143-519 (534)
44 3haz_A Proline dehydrogenase; 100.0 1.9E-74 6.6E-79 621.8 33.5 340 14-357 640-988 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 1.8E-72 6.3E-77 576.8 26.3 329 15-353 161-515 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 2.4E-71 8.1E-76 566.4 28.1 325 16-353 129-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 1.9E-68 6.5E-73 538.6 21.4 313 14-370 117-449 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.1E-67 3.8E-72 533.8 21.6 322 13-355 98-448 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 2.1E-66 7.3E-71 523.0 19.9 306 14-372 131-446 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 2.5E-65 8.7E-70 513.5 21.8 298 14-357 128-440 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 2.7E-64 9.3E-69 503.7 21.0 296 14-357 116-423 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 3.1E-63 1.1E-67 499.7 19.1 283 14-317 94-402 (452)
53 4gic_A HDH, histidinol dehydro 96.7 0.49 1.7E-05 45.8 22.4 259 13-351 119-398 (423)
54 1kae_A HDH, histidinol dehydro 96.4 0.82 2.8E-05 44.3 22.5 255 14-351 114-391 (434)
55 2fiu_A Conserved hypothetical 51.7 62 0.0021 24.2 7.5 57 207-282 16-74 (99)
56 3v42_A Folliculin; tumor suppr 49.3 28 0.00095 30.7 5.8 64 41-109 21-84 (226)
57 3lo3_A Uncharacterized conserv 24.8 2.1E+02 0.0071 21.0 6.7 57 207-282 15-73 (94)
58 1s7i_A Hypothetical protein PA 22.8 2E+02 0.0067 22.4 6.2 27 257-284 81-107 (124)
59 3hhl_A RPA0582; alpha-beta-bar 22.6 2.3E+02 0.0079 22.7 6.8 61 205-281 45-107 (143)
No 1
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=2.8e-86 Score=669.18 Aligned_cols=359 Identities=47% Similarity=0.831 Sum_probs=337.4
Q ss_pred cccCCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhhcCCCCcEEEeCCh
Q 015976 10 ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAV 89 (397)
Q Consensus 10 ~~~~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~alP~g~v~~v~g~~ 89 (397)
....+...+++|+|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++++++|+|++|+|+|+.
T Consensus 107 ~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~alP~gvv~vv~g~~ 186 (469)
T 3sza_A 107 PQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGV 186 (469)
T ss_dssp GGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHSCTTTSCBCCCSH
T ss_pred ccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCcceEEEEECCH
Confidence 33445678999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HhHHHHHhCCCCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 90 AETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 90 ~~~~~L~~~~v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
+.+..|+.|++|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 187 ~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 265 (469)
T 3sza_A 187 PETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDY 265 (469)
T ss_dssp HHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSCCE
T ss_pred HHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcE
Confidence 8888898889999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCccccceEEecC
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDV 248 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~~~~Ptil~~~ 248 (397)
||||++++|+|+++|+++++++. |+|.+ ++++||++++++++++++++ +|+++++||..+..|+|++|||+.++
T Consensus 266 vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~g~~~~PTvl~~v 340 (469)
T 3sza_A 266 ILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAATRYIAPTILTDV 340 (469)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETTTTEECCEEEESC
T ss_pred EEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCCCceeCCeeecCC
Confidence 99999999999999999999985 66666 89999999999999999998 48999999988777999999999999
Q ss_pred CCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCccc
Q 015976 249 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 328 (397)
Q Consensus 249 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfgG 328 (397)
+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+...+.+||||
T Consensus 341 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG 420 (469)
T 3sza_A 341 DPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGG 420 (469)
T ss_dssp CTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCC
T ss_pred CCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987555678999999
Q ss_pred CCCCCCCCcchHHHHHHhhhccEEEEcCccCC--CCCcCCCCchhHHH
Q 015976 329 VQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPPYTKGKLR 374 (397)
Q Consensus 329 ~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~--~~~~~~~~~~~~~~ 374 (397)
+|.||+|+++|.+++++||+.|+|++++++.+ .+++||||++.+.+
T Consensus 421 ~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 421 VGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp CGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred ccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 99999999999999999999999999987755 57899999887653
No 2
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=8.3e-85 Score=660.33 Aligned_cols=341 Identities=28% Similarity=0.435 Sum_probs=325.2
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+
T Consensus 132 ~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~ 211 (490)
T 2wme_A 132 ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGRE 211 (490)
T ss_dssp TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTT
T ss_pred CCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHH
Confidence 3556789999999999999999999999999999999999999999999999999999999999 99999999999 568
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHH-HHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCC
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 168 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~-~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~ 168 (397)
.++.|++|+ +|+|.||||+.+|+++++ .+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++
T Consensus 212 ~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~ 290 (490)
T 2wme_A 212 VGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGT 290 (490)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCC
T ss_pred HHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCce
Confidence 899999997 999999999999998876 556678999999999999999999999999999999999 99999999999
Q ss_pred EEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-----CCCcccc
Q 015976 169 HIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIA 241 (397)
Q Consensus 169 ~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-----~~~~~~~ 241 (397)
|||||+++||+|+++|+++++++++|||.| ++++||++++++++++.++++++. +|+++++||.+. ..|+|++
T Consensus 291 rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~ 370 (490)
T 2wme_A 291 RVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVA 370 (490)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBC
T ss_pred eeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccC
Confidence 999999999999999999999999999998 999999999999999999999998 889999999864 2589999
Q ss_pred ceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCC
Q 015976 242 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 321 (397)
Q Consensus 242 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~ 321 (397)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..
T Consensus 371 Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~ 448 (490)
T 2wme_A 371 PTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SP 448 (490)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CC
T ss_pred CEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998643 45
Q ss_pred CCCCcccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 322 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 322 ~~~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 449 ~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 449 AEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 78999999999999999999999999999999875
No 3
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.1e-82 Score=648.46 Aligned_cols=342 Identities=31% Similarity=0.504 Sum_probs=328.0
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+
T Consensus 141 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~ 220 (503)
T 3iwj_A 141 DTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPE 220 (503)
T ss_dssp TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHH
T ss_pred CCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHH
Confidence 3557899999999999999999999999999999999999999999999999999999999999 99999999999 457
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|+.|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 221 ~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 299 (503)
T 3iwj_A 221 AGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSR 299 (503)
T ss_dssp HTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEE
T ss_pred HHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCe
Confidence 889999996 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC---CCCccccceE
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRIAPTL 244 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~---~~~~~~~Pti 244 (397)
||||+++||+|+++|+++++++++|+|.+ ++++||++++++++++.+++++++ +|+++++||... ..|+|++|||
T Consensus 300 vlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTv 379 (503)
T 3iwj_A 300 LILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTI 379 (503)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEE
T ss_pred eEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCee
Confidence 99999999999999999999999999998 899999999999999999999998 789999999864 4689999999
Q ss_pred EecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCC
Q 015976 245 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 324 (397)
Q Consensus 245 l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~ 324 (397)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+
T Consensus 380 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~ 457 (503)
T 3iwj_A 380 ITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP--CFTQA 457 (503)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC--CCTTS
T ss_pred eecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999643 46889
Q ss_pred CcccCCCCCCCCcchHHHHHHhhhccEEEEcCc
Q 015976 325 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 325 pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 458 PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~ 490 (503)
T 3iwj_A 458 PWGGVKRSGFGRELGEWGLDNYLSVKQVTQYIS 490 (503)
T ss_dssp CBCCSGGGEECCBSHHHHHHTTEEEEEEEEECC
T ss_pred CcCCcCcccCCCcchHHHHHHhhCeEEEEEeCC
Confidence 999999999999999999999999999998643
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.4e-82 Score=648.77 Aligned_cols=340 Identities=26% Similarity=0.478 Sum_probs=328.2
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~ 91 (397)
+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.
T Consensus 161 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~ 240 (520)
T 3ed6_A 161 DTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEV 240 (520)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTH
T ss_pred CCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHH
Confidence 456789999999999999999999999999999999999999999999999999999999999 99999999999 6788
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 170 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v 170 (397)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 241 g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv 319 (520)
T 3ed6_A 241 GDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRI 319 (520)
T ss_dssp HHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceE
Confidence 99999997 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-----CCCccccce
Q 015976 171 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPT 243 (397)
Q Consensus 171 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-----~~~~~~~Pt 243 (397)
|||+++||+|+++|+++++++++|+|.| ++++||++++++++++++++++++ +|+++++||... ..|+|++||
T Consensus 320 lV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PT 399 (520)
T 3ed6_A 320 LVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399 (520)
T ss_dssp EEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCE
T ss_pred EEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCe
Confidence 9999999999999999999999999998 899999999999999999999998 789999999864 468999999
Q ss_pred EEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCC
Q 015976 244 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 323 (397)
Q Consensus 244 il~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~ 323 (397)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.
T Consensus 400 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~ 477 (520)
T 3ed6_A 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQ 477 (520)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTT
T ss_pred EEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997654 589
Q ss_pred CCcccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 324 LPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 324 ~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 478 ~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 478 APWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp SCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred CCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 999999999999999999999999999998875
No 5
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.6e-82 Score=643.74 Aligned_cols=341 Identities=22% Similarity=0.372 Sum_probs=326.4
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChH-
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA- 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~- 90 (397)
.+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.+
T Consensus 113 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~ 192 (484)
T 3ros_A 113 DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQ 192 (484)
T ss_dssp TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHH
T ss_pred CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHH
Confidence 3567899999999999999999999999999999999999999999999999999999999999 99999999999654
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++ |+.|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 193 ~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 270 (484)
T 3ros_A 193 LAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDART-YNDGQVCTSSKR 270 (484)
T ss_dssp HHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCE
T ss_pred HHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHh-cCCCCCccCCce
Confidence 456 99996 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCcc-CCCCccccceEEe
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLL 246 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~-~~~~~~~~Ptil~ 246 (397)
||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||.. +..|+|++|||+.
T Consensus 271 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~ 350 (484)
T 3ros_A 271 IIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILT 350 (484)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEE
T ss_pred EEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEee
Confidence 99999999999999999999999999998 899999999999999999999998 78999999976 3579999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.. ...+.+||
T Consensus 351 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~--~~~~~~Pf 428 (484)
T 3ros_A 351 DIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRW--ITSGELPF 428 (484)
T ss_dssp CCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCC--CCCTTSCB
T ss_pred cCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCC--CCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999964 34689999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEcCc
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 429 GG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 429 GGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred CCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 9999999999999999999999999998753
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.2e-82 Score=646.78 Aligned_cols=340 Identities=23% Similarity=0.414 Sum_probs=327.3
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhhcCCCCcEEEeC-ChHh
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG-AVAE 91 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~alP~g~v~~v~g-~~~~ 91 (397)
.+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.+++|+|++|+|+| +.+.
T Consensus 151 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~ 230 (498)
T 4f3x_A 151 PGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETV 230 (498)
T ss_dssp TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTH
T ss_pred ccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999999999999 5678
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 170 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v 170 (397)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 231 g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 309 (498)
T 4f3x_A 231 GNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRI 309 (498)
T ss_dssp HHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceE
Confidence 99999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcC-eEeeCCccC-CCCccccceEEe
Q 015976 171 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSG-KIVHGGERD-KNKLRIAPTLLL 246 (397)
Q Consensus 171 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~-~v~~gg~~~-~~~~~~~Ptil~ 246 (397)
|||+++||+|+++|+++++++++|+|.| ++++||++++++++++++++++++ +|+ ++++||... ..|+|++|||+.
T Consensus 310 lV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~ 389 (498)
T 4f3x_A 310 YAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVA 389 (498)
T ss_dssp EEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEE
T ss_pred EecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEee
Confidence 9999999999999999999999999988 899999999999999999999998 788 999999863 479999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ .+.+||
T Consensus 390 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~Pf 467 (498)
T 4f3x_A 390 GATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML--TNEMPH 467 (498)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCB
T ss_pred cCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998654 489999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
||+|.||+|+++|.+++++||+.|+|+++
T Consensus 468 GG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 468 GGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp CCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred CCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999875
No 7
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=9.1e-83 Score=645.92 Aligned_cols=340 Identities=27% Similarity=0.431 Sum_probs=326.2
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+
T Consensus 138 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~ 217 (484)
T 3ifg_A 138 ANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKA 217 (484)
T ss_dssp TTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHH
T ss_pred CCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHH
Confidence 3557789999999999999999999999999999999999999999999999999999999999 99999999999 457
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 218 ~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 296 (484)
T 3ifg_A 218 IGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNR 296 (484)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCE
T ss_pred HHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCe
Confidence 899999997 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCC-CCccccceEEe
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLL 246 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~-~~~~~~Ptil~ 246 (397)
||||+++||+|+++|+++++++++|+|.| ++++||++++++++++++++++++ +|+++++||.... .|+|++|||+.
T Consensus 297 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~ 376 (484)
T 3ifg_A 297 FFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLT 376 (484)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEE
T ss_pred EEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEe
Confidence 99999999999999999999999999998 899999999999999999999998 7899999998643 69999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.. ...+.+||
T Consensus 377 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~Pf 454 (484)
T 3ifg_A 377 GVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL--ISNEVAPF 454 (484)
T ss_dssp EECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC--CCCSSSCB
T ss_pred cCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999854 34689999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
||+|.||+|+++|.+++++||+.|+|++.
T Consensus 455 GG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 455 GGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp CCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999763
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.2e-82 Score=647.10 Aligned_cols=339 Identities=26% Similarity=0.466 Sum_probs=326.4
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~ 91 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.
T Consensus 159 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~ 238 (504)
T 3ek1_A 159 GQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREI 238 (504)
T ss_dssp TEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHH
T ss_pred cccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999 99999999998 5678
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 170 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v 170 (397)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 239 g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv 317 (504)
T 3ek1_A 239 GAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRI 317 (504)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEE
Confidence 89999997 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCccccceEEecC
Q 015976 171 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDV 248 (397)
Q Consensus 171 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~~~~Ptil~~~ 248 (397)
|||+++||+|+++|+++++++++|||.+ ++++||++++++++++++++++++ +|+++++||.. ..|+|++|||+.++
T Consensus 318 lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v 396 (504)
T 3ek1_A 318 YVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGV 396 (504)
T ss_dssp EEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEE
T ss_pred EEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecC
Confidence 9999999999999999999999999998 899999999999999999999998 78999999976 46899999999999
Q ss_pred CCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCccc
Q 015976 249 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 328 (397)
Q Consensus 249 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfgG 328 (397)
+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+... ..+.+||||
T Consensus 397 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG 474 (504)
T 3ek1_A 397 TSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI--SNEVAPFGG 474 (504)
T ss_dssp CTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC--CCSSSCBCC
T ss_pred CCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998653 468999999
Q ss_pred CCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 329 VQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 329 ~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
+|.||+|+++|.+++++||+.|+|+++.
T Consensus 475 ~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 475 VKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp SGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred cCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 9999999999999999999999998764
No 9
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.1e-82 Score=649.26 Aligned_cols=344 Identities=29% Similarity=0.457 Sum_probs=326.3
Q ss_pred ceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhHHHH
Q 015976 17 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSAL 95 (397)
Q Consensus 17 ~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~~~L 95 (397)
.+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.+.++.|
T Consensus 144 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L 223 (517)
T 3r31_A 144 AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLL 223 (517)
T ss_dssp EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHH
T ss_pred ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999 9999999999988899999
Q ss_pred HhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEEEeC
Q 015976 96 LDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 174 (397)
Q Consensus 96 ~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~ 174 (397)
++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+
T Consensus 224 ~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~ 302 (517)
T 3r31_A 224 VNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQK 302 (517)
T ss_dssp HTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEG
T ss_pred HhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeH
Confidence 9997 999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC----CCCccccceEEecC
Q 015976 175 DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIAPTLLLDV 248 (397)
Q Consensus 175 ~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~----~~~~~~~Ptil~~~ 248 (397)
+++|+|+++|+++++++++|+|.| ++++||++++++++++++++++++ +|+++++||... ..|+|+.|||+.++
T Consensus 303 ~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v 382 (517)
T 3r31_A 303 KAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADV 382 (517)
T ss_dssp GGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecC
Confidence 999999999999999999999998 899999999999999999999998 889999999312 36899999999999
Q ss_pred CCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCccc
Q 015976 249 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 328 (397)
Q Consensus 249 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfgG 328 (397)
+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+... ..+.+||||
T Consensus 383 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG 460 (517)
T 3r31_A 383 TDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGG 460 (517)
T ss_dssp CTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCC
T ss_pred CCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999653 468999999
Q ss_pred CCCCCCCCcchHHHHHHhhhccEEEEcCccCCCCC
Q 015976 329 VQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 363 (397)
Q Consensus 329 ~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~ 363 (397)
+|.||+|+++|.+++++||+.|+|.++....+.+.
T Consensus 461 ~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 495 (517)
T 3r31_A 461 SKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495 (517)
T ss_dssp EETTEECCBSTGGGGGGSEEEEEEEECCC------
T ss_pred cCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCCc
Confidence 99999999999999999999999998865544444
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.3e-82 Score=646.37 Aligned_cols=342 Identities=30% Similarity=0.465 Sum_probs=329.2
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+
T Consensus 151 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~ 230 (528)
T 3u4j_A 151 DDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDP 230 (528)
T ss_dssp TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTT
T ss_pred CCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHH
Confidence 3556899999999999999999999999999999999999999999999999999999999999 99999999999 678
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 231 ~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 309 (528)
T 3u4j_A 231 AGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSR 309 (528)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEE
T ss_pred HHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCE
Confidence 899999997 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCC--CCccccceEE
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--NKLRIAPTLL 245 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~--~~~~~~Ptil 245 (397)
||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++.+++++++ +|+++++||.... .|+|++|||+
T Consensus 310 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl 389 (528)
T 3u4j_A 310 LLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVF 389 (528)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEE
T ss_pred EEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEE
Confidence 99999999999999999999999999998 899999999999999999999998 7899999998754 6999999999
Q ss_pred ecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCC
Q 015976 246 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 325 (397)
Q Consensus 246 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~p 325 (397)
.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+|
T Consensus 390 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~P 467 (528)
T 3u4j_A 390 AGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVID--GTPELP 467 (528)
T ss_dssp ESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSC
T ss_pred ecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999754 368999
Q ss_pred cccCCCCCCCCcchHHHHHHhhhccEEEEcCc
Q 015976 326 FGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 326 fgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
|||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 468 fGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 468 IGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp BCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred cCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 99999999999999999999999999998753
No 11
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=3.2e-82 Score=644.30 Aligned_cols=341 Identities=24% Similarity=0.409 Sum_probs=326.9
Q ss_pred CCCcceEee-eeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-Ch
Q 015976 13 FPSSAEIVP-EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AV 89 (397)
Q Consensus 13 ~~~~~~~~~-~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~ 89 (397)
.+...++++ +|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.
T Consensus 136 ~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~ 215 (506)
T 3rh9_A 136 PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKAS 215 (506)
T ss_dssp GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHH
T ss_pred CCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCCh
Confidence 355678889 9999999999999999999999999999999999999999999999999999999 99999999999 56
Q ss_pred HhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCC
Q 015976 90 AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 168 (397)
Q Consensus 90 ~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~ 168 (397)
+.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++
T Consensus 216 ~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~ 294 (506)
T 3rh9_A 216 VIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCAN 294 (506)
T ss_dssp HHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCC
T ss_pred HHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCc
Confidence 7889999997 999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCcc-CC-CCccccceE
Q 015976 169 HIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DK-NKLRIAPTL 244 (397)
Q Consensus 169 ~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~-~~-~~~~~~Pti 244 (397)
|||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||.. +. .|+|++|||
T Consensus 295 rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTv 374 (506)
T 3rh9_A 295 RIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTV 374 (506)
T ss_dssp EEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEE
T ss_pred EEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeE
Confidence 999999999999999999999999999998 899999999999999999999998 78999999975 33 689999999
Q ss_pred EecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCC
Q 015976 245 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 324 (397)
Q Consensus 245 l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~ 324 (397)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+
T Consensus 375 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~ 452 (506)
T 3rh9_A 375 VQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG--PTPEA 452 (506)
T ss_dssp EECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCC--CCTTS
T ss_pred EccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC--CCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999765 35789
Q ss_pred CcccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 325 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 325 pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
||||+|.||+|+++|.+++++||+.|+|.++.
T Consensus 453 PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 453 PFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp CBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred CccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999999999999999999998865
No 12
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=9.1e-82 Score=639.79 Aligned_cols=339 Identities=26% Similarity=0.445 Sum_probs=325.2
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhhcCCCCcEEEeC-ChHhH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG-AVAET 92 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~alP~g~v~~v~g-~~~~~ 92 (397)
+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++++++|+|++|+|+| +.+.+
T Consensus 150 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g 229 (495)
T 1wnd_A 150 GHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVG 229 (495)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTH
T ss_pred CceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999 67889
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEE
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 171 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~ 171 (397)
+.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 230 ~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl 308 (495)
T 1wnd_A 230 DPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIY 308 (495)
T ss_dssp HHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEE
T ss_pred HHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEE
Confidence 9999997 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hc-CeEeeCCc-cCCCCccccceEEec
Q 015976 172 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VS-GKIVHGGE-RDKNKLRIAPTLLLD 247 (397)
Q Consensus 172 V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g-~~v~~gg~-~~~~~~~~~Ptil~~ 247 (397)
||++++|+|+++|+++++++++|+|.| ++++||+++++++++++++++++. +| +++++||. ..+.|+|++|||+.+
T Consensus 309 V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~ 388 (495)
T 1wnd_A 309 AQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAG 388 (495)
T ss_dssp EETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEEC
T ss_pred ecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeC
Confidence 999999999999999999999999998 999999999999999999999998 67 89999997 544689999999999
Q ss_pred CCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCcc
Q 015976 248 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 327 (397)
Q Consensus 248 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfg 327 (397)
++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+|||
T Consensus 389 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfG 466 (495)
T 1wnd_A 389 ALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHG 466 (495)
T ss_dssp CCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBC
T ss_pred CCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998653 45889999
Q ss_pred cCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 328 GVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 328 G~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
|+|.||+|+++|.+++++|++.|+|..+
T Consensus 467 G~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 467 GQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp CSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999763
No 13
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=6.1e-82 Score=643.75 Aligned_cols=337 Identities=26% Similarity=0.428 Sum_probs=324.1
Q ss_pred cceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhHH
Q 015976 16 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAETS 93 (397)
Q Consensus 16 ~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~~~ 93 (397)
..+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.++
T Consensus 171 ~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~ 250 (517)
T 2o2p_A 171 LTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQ 250 (517)
T ss_dssp EEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHH
T ss_pred eEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999 99999999999 557889
Q ss_pred HHHhCC-CCeEEEECCHHHHHHHHHHHh-cccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEE
Q 015976 94 ALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 171 (397)
Q Consensus 94 ~L~~~~-v~~v~ftGs~~~g~~v~~~~~-~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~ 171 (397)
.|++|+ +|+|.||||+++|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 251 ~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~ 329 (517)
T 2o2p_A 251 RLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLF 329 (517)
T ss_dssp HHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEE
T ss_pred HHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEE
Confidence 999997 999999999999999999999 899999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCC-CCccccceEEecC
Q 015976 172 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDV 248 (397)
Q Consensus 172 V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~-~~~~~~Ptil~~~ 248 (397)
||+++||+|+++|+++++++++|||.| ++++||++++++++++++++++++ +|+++++||.... .|+|++|||+.++
T Consensus 330 V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v 409 (517)
T 2o2p_A 330 VEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDV 409 (517)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESC
T ss_pred EeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCC
Confidence 999999999999999999999999988 899999999999999999999998 7899999998643 6899999999999
Q ss_pred CCCCcccccccccCccceEeeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 249 PRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 249 ~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++|++++||+||||++|++|+| +||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||
T Consensus 410 ~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~Pf 487 (517)
T 2o2p_A 410 EDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPF 487 (517)
T ss_dssp CTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCB
T ss_pred CCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCc
Confidence 99999999999999999999999 9999999999999999999999999999999999999999998643 4578999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
||+|.||+|+++|.+++++|++.|+|+++
T Consensus 488 GG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 488 GGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp CCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999764
No 14
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.3e-82 Score=640.94 Aligned_cols=336 Identities=29% Similarity=0.473 Sum_probs=324.6
Q ss_pred cceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhHHH
Q 015976 16 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 94 (397)
Q Consensus 16 ~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~~~ 94 (397)
..+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|+.+.++.
T Consensus 139 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~ 218 (495)
T 3b4w_A 139 QSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQA 218 (495)
T ss_dssp EEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHH
T ss_pred eEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999 999999999997788999
Q ss_pred HHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEEEe
Q 015976 95 LLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 173 (397)
Q Consensus 95 L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~ 173 (397)
|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||
T Consensus 219 L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~ 297 (495)
T 3b4w_A 219 LTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAP 297 (495)
T ss_dssp HTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEE
T ss_pred HHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEc
Confidence 99996 999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCC---CCccccceEEecC
Q 015976 174 KDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---NKLRIAPTLLLDV 248 (397)
Q Consensus 174 ~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~---~~~~~~Ptil~~~ 248 (397)
++++|+|+++|+++++++++|+|.+ ++++||+++++++++++++++++. +|+++++||.... .|+|++|||+.++
T Consensus 298 ~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v 377 (495)
T 3b4w_A 298 RSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADV 377 (495)
T ss_dssp GGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESC
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCC
Confidence 9999999999999999999999998 899999999999999999999998 7889999998643 5899999999999
Q ss_pred CCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCccc
Q 015976 249 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 328 (397)
Q Consensus 249 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfgG 328 (397)
+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++. ..+.+||||
T Consensus 378 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG 454 (495)
T 3b4w_A 378 DNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGG 454 (495)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCC
T ss_pred CCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999964 468899999
Q ss_pred CCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 329 VQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 329 ~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
+|.||+|+++|.+++++|++.|+|..+
T Consensus 455 ~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 455 YKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp SGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred CCCCCcCccchHHHHHHhcceeEEEEc
Confidence 999999999999999999999999875
No 15
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.9e-82 Score=642.76 Aligned_cols=341 Identities=24% Similarity=0.353 Sum_probs=326.8
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 92 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~ 92 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.+.+
T Consensus 153 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~ 232 (521)
T 4e4g_A 153 GIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAV 232 (521)
T ss_dssp TEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHH
T ss_pred CcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHH
Confidence 446789999999999999999999999999999999999999999999999999999999999 9999999999988888
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEE
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 171 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~ 171 (397)
+.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 233 ~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvl 311 (521)
T 4e4g_A 233 DAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAV 311 (521)
T ss_dssp HHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEE
T ss_pred HHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEE
Confidence 9999997 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCC-chHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-----CCCccccce
Q 015976 172 TTKD-YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIAPT 243 (397)
Q Consensus 172 V~~~-i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-----~~~~~~~Pt 243 (397)
||++ ++|+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||... ..|+|++||
T Consensus 312 V~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PT 391 (521)
T 4e4g_A 312 PVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGC 391 (521)
T ss_dssp EBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCE
T ss_pred EeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCE
Confidence 9999 99999999999999999999988 899999999999999999999998 789999999752 468999999
Q ss_pred EEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCC
Q 015976 244 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 323 (397)
Q Consensus 244 il~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~ 323 (397)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ...+.
T Consensus 392 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~ 470 (521)
T 4e4g_A 392 LFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAY 470 (521)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTT
T ss_pred EEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999753 33578
Q ss_pred CCcccCCCCCCC--CcchHHHHHHhhhccEEEEcC
Q 015976 324 LPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 324 ~pfgG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 356 (397)
+||||+|.||+| +++|.+++++||+.|+|+.++
T Consensus 471 ~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 471 HSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp SCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred CCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 999999999999 799999999999999998864
No 16
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.5e-81 Score=639.10 Aligned_cols=340 Identities=27% Similarity=0.445 Sum_probs=325.9
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~ 91 (397)
+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.
T Consensus 150 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~ 229 (501)
T 1bxs_A 150 NFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTA 229 (501)
T ss_dssp SEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTH
T ss_pred CcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHH
Confidence 445689999999999999999999999999999999999999999999999999999999999 99999999999 6778
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHh-cccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~-~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
++.|++|+ +|+|.||||+++|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 230 g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 308 (501)
T 1bxs_A 230 GAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASR 308 (501)
T ss_dssp HHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCE
Confidence 99999997 999999999999999999999 999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-CCCccccceEEe
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLL 246 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-~~~~~~~Ptil~ 246 (397)
||||+++||+|+++|+++++++++|||.| ++++||++++++++++++++++++ +|+++++||... ..|+|++|||+.
T Consensus 309 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~ 388 (501)
T 1bxs_A 309 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 388 (501)
T ss_dssp EEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEE
T ss_pred EEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEe
Confidence 99999999999999999999999999998 899999999999999999999998 789999999764 368999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||
T Consensus 389 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~pf 466 (501)
T 1bxs_A 389 DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPF 466 (501)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCB
T ss_pred cCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCC--CCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999753 3578999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
||+|.||+|+++|.+++++|++.|+|..+.
T Consensus 467 GG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 467 GGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp CCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 999999999999999999999999998763
No 17
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=7.8e-82 Score=641.46 Aligned_cols=342 Identities=25% Similarity=0.446 Sum_probs=326.8
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+
T Consensus 138 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~ 217 (497)
T 3k2w_A 138 QDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSV 217 (497)
T ss_dssp TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTT
T ss_pred CCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchH
Confidence 3557889999999999999999999999999999999999999999999999999999999999 99999999999 668
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|+.|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 218 ~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 296 (497)
T 3k2w_A 218 VGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVER 296 (497)
T ss_dssp HHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEE
T ss_pred HHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcE
Confidence 899999997 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCcc--C-C--CCccccc
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER--D-K--NKLRIAP 242 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~--~-~--~~~~~~P 242 (397)
||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||.. . . .|+|+.|
T Consensus 297 vlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~P 376 (497)
T 3k2w_A 297 LYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEP 376 (497)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCC
T ss_pred EEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCC
Confidence 99999999999999999999999999998 899999999999999999999998 88999999973 2 2 6899999
Q ss_pred eEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCC
Q 015976 243 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 322 (397)
Q Consensus 243 til~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~ 322 (397)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ .+
T Consensus 377 tvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~ 454 (497)
T 3k2w_A 377 TVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE--QH 454 (497)
T ss_dssp EEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CT
T ss_pred EEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998754 48
Q ss_pred CCCcccCCCCCCCCcchHHHHHHhhhccEEEEcCc
Q 015976 323 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 323 ~~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
.+||||+|.||+|+++|.+++++||+.|+|.++..
T Consensus 455 ~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~ 489 (497)
T 3k2w_A 455 QGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489 (497)
T ss_dssp TSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECC
T ss_pred CCCcCCcCCCcCCccchHHHHHHhcceEEEEEEcc
Confidence 89999999999999999999999999999988753
No 18
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=2.4e-81 Score=636.98 Aligned_cols=335 Identities=26% Similarity=0.426 Sum_probs=321.0
Q ss_pred CCcceEe-eeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 14 PSSAEIV-PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 14 ~~~~~~~-~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
+...+++ ++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+
T Consensus 151 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~ 230 (497)
T 3i44_A 151 GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGAN 230 (497)
T ss_dssp TCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTT
T ss_pred CceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChH
Confidence 4557888 99999999999999999999999999999999999999999999999999999999 99999999999 668
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++||| +.|++.+++++| .|+||.|++++|
T Consensus 231 ~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~r 308 (497)
T 3i44_A 231 VGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTR 308 (497)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCE
T ss_pred HHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCE
Confidence 899999997 99999999999999999999999999999999999999999999 999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCc-cCC---CCccccce
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGE-RDK---NKLRIAPT 243 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~-~~~---~~~~~~Pt 243 (397)
||||+++||+|+++|+++++++++|||.| ++++||++++++++++++++++++ +|+++++||. ... .|+|++||
T Consensus 309 vlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PT 388 (497)
T 3i44_A 309 MLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPT 388 (497)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCE
T ss_pred EEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCE
Confidence 99999999999999999999999999998 899999999999999999999998 7899999994 322 68999999
Q ss_pred EEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCC
Q 015976 244 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 323 (397)
Q Consensus 244 il~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~ 323 (397)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||. ....+.
T Consensus 389 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~---~~~~~~ 465 (497)
T 3i44_A 389 VFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG---HELPGG 465 (497)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT---CCCCTT
T ss_pred EEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC---CCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995 234688
Q ss_pred CCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 015976 324 LPFGGVQESGMGAYHGKFSFDVFSHKKAVL 353 (397)
Q Consensus 324 ~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~ 353 (397)
+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 466 ~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 466 SYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp CCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred CCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 999999999999999999999999999985
No 19
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2.1e-81 Score=638.79 Aligned_cols=340 Identities=29% Similarity=0.483 Sum_probs=325.9
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 92 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~ 92 (397)
+...+++|+|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|+.+.+
T Consensus 146 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g 225 (503)
T 1a4s_A 146 GAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETG 225 (503)
T ss_dssp GCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHH
T ss_pred CceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHH
Confidence 346789999999999999999999999999999999999999999999999999999999999 9999999999943888
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEE
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 171 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~ 171 (397)
+.|++|+ +|+|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 226 ~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl 304 (503)
T 1a4s_A 226 SLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVF 304 (503)
T ss_dssp HHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEE
T ss_pred HHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEE
Confidence 9999997 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-------CCCccccc
Q 015976 172 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-------KNKLRIAP 242 (397)
Q Consensus 172 V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-------~~~~~~~P 242 (397)
||+++||+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||... ..|+|++|
T Consensus 305 V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~P 384 (503)
T 1a4s_A 305 VQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSP 384 (503)
T ss_dssp EEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCC
T ss_pred EehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCC
Confidence 999999999999999999999999998 899999999999999999999998 789999999764 35899999
Q ss_pred eEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCC
Q 015976 243 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 322 (397)
Q Consensus 243 til~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~ 322 (397)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+
T Consensus 385 Tvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~ 462 (503)
T 1a4s_A 385 CVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPV 462 (503)
T ss_dssp EEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCT
T ss_pred EEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC--CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999764 357
Q ss_pred CCCcccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 323 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 323 ~~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
.+||||+|.||+|+++|.+++++|++.|+|..+.
T Consensus 463 ~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 463 EVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp TSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 8999999999999999999999999999998864
No 20
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2.3e-81 Score=636.37 Aligned_cols=340 Identities=26% Similarity=0.446 Sum_probs=327.1
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+
T Consensus 135 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~ 214 (481)
T 3jz4_A 135 ADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGA 214 (481)
T ss_dssp TTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHH
T ss_pred CCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChH
Confidence 3557789999999999999999999999999999999999999999999999999999999999 99999999999 678
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++
T Consensus 215 ~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 293 (481)
T 3jz4_A 215 VGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANR 293 (481)
T ss_dssp HHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEE
T ss_pred HHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcE
Confidence 899999997 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCcc-CCCCccccceEEe
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLL 246 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~-~~~~~~~~Ptil~ 246 (397)
||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||.. +..|+|++|||+.
T Consensus 294 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~ 373 (481)
T 3jz4_A 294 LYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILV 373 (481)
T ss_dssp EEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEE
T ss_pred EEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEe
Confidence 99999999999999999999999999998 899999999999999999999998 78999999987 4468999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||
T Consensus 374 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~Pf 451 (481)
T 3jz4_A 374 DVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPF 451 (481)
T ss_dssp SCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCB
T ss_pred cCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999764 4689999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
||+|.||+|+++|.+++++||+.|+|++.
T Consensus 452 GG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 452 GGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 99999999999999999999999999864
No 21
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=3.1e-81 Score=631.65 Aligned_cols=342 Identities=36% Similarity=0.661 Sum_probs=324.4
Q ss_pred CCCcccCCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhhcCCCCcEEEe
Q 015976 7 KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE 86 (397)
Q Consensus 7 ~~~~~~~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~alP~g~v~~v~ 86 (397)
..+....+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++++++|+|++|+|+
T Consensus 114 ~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~alP~gvv~vv~ 193 (457)
T 3lns_A 114 PSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQ 193 (457)
T ss_dssp CCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHCCTTTEEECC
T ss_pred cccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCHhhEEEec
Confidence 33444456778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHhHHHHHhCCCCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcccc
Q 015976 87 GAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 166 (397)
Q Consensus 87 g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a 166 (397)
|+.+.+..|+++++|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++
T Consensus 194 g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a 272 (457)
T 3lns_A 194 GGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIA 272 (457)
T ss_dssp CCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTS
T ss_pred CCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHH-HhCCCCccC
Confidence 9888999999866999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCEEEEeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCccccceEEe
Q 015976 167 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLL 246 (397)
Q Consensus 167 ~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~~~~Ptil~ 246 (397)
++|||||++++|+|+++|++++++++ |.+. ++||+++++++++++++++++ ++++++||..+..|+|++|||+.
T Consensus 273 ~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~~~~~gg~~~~~g~~~~Ptvl~ 346 (457)
T 3lns_A 273 PDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QGQVLVGSQADVSKRALSATVVD 346 (457)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CSEEEECCCEEGGGTEECCEEEE
T ss_pred CceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CCeEEeCCccCCCCceeCCEEEe
Confidence 99999999999999999999999988 5666 999999999999999999976 36999999876679999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCC
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 325 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~p 325 (397)
+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.++++++++++++|+|+||++..+...+.+|
T Consensus 347 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~P 426 (457)
T 3lns_A 347 GVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426 (457)
T ss_dssp SCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSC
T ss_pred cCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999986555678999
Q ss_pred cccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 326 FGGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 326 fgG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
|||+|.||+|+++|.+++++||+.|+|++.
T Consensus 427 fGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 427 FGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp BCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred cCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999999999999999864
No 22
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.1e-81 Score=639.97 Aligned_cols=340 Identities=27% Similarity=0.431 Sum_probs=326.1
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~ 91 (397)
+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.
T Consensus 149 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 228 (500)
T 1o04_A 149 DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTA 228 (500)
T ss_dssp SEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTH
T ss_pred CceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHH
Confidence 345689999999999999999999999999999999999999999999999999999999999 99999999999 6788
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHh-cccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~-~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
++.|++|+ +|+|.||||+++|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 229 g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 307 (500)
T 1o04_A 229 GAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSR 307 (500)
T ss_dssp HHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEE
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCE
Confidence 99999997 999999999999999999999 999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-CCCccccceEEe
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLL 246 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-~~~~~~~Ptil~ 246 (397)
||||+++||+|+++|+++++++++|||.| ++++||+++++++++++++++++. +|+++++||... ..|+|++|||+.
T Consensus 308 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~ 387 (500)
T 1o04_A 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFG 387 (500)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEE
T ss_pred EEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEe
Confidence 99999999999999999999999999998 899999999999999999999998 789999999764 368999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||
T Consensus 388 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~Pf 465 (500)
T 1o04_A 388 DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPF 465 (500)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCB
T ss_pred CCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999753 3578999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
||+|.||+|+++|.+++++|++.|+|..+.
T Consensus 466 GG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 466 GGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp CCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred CCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 999999999999999999999999998763
No 23
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.1e-81 Score=640.64 Aligned_cols=336 Identities=27% Similarity=0.449 Sum_probs=322.9
Q ss_pred CcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhH
Q 015976 15 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAET 92 (397)
Q Consensus 15 ~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~~ 92 (397)
...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+.+
T Consensus 144 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g 223 (505)
T 3prl_A 144 KIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIG 223 (505)
T ss_dssp EEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHH
T ss_pred ceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999998 99999999999 56788
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEE
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 171 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~ 171 (397)
+.|++|+ +|+|.||||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus 224 ~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl 300 (505)
T 3prl_A 224 DHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVF 300 (505)
T ss_dssp HHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEE
T ss_pred HHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEE
Confidence 9999996 999999999999999999887 8999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCccccceEEecCCC
Q 015976 172 TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPR 250 (397)
Q Consensus 172 V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~~~~Ptil~~~~~ 250 (397)
||++++|+|+++|+++++++++|||.+++++||++++++++++.+++++++ +|+++++||.. .|+|++|||+.++++
T Consensus 301 V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~ 378 (505)
T 3prl_A 301 VQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTP 378 (505)
T ss_dssp EEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCT
T ss_pred EeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCC
Confidence 999999999999999999999999988899999999999999999999998 78999999974 589999999999999
Q ss_pred CCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCcccCC
Q 015976 251 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 330 (397)
Q Consensus 251 ~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfgG~~ 330 (397)
+|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ...+.+||||+|
T Consensus 379 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~~PFGG~k 457 (505)
T 3prl_A 379 AMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTE-RGPDHFPFLGVK 457 (505)
T ss_dssp TSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCC-SCSTTSCBCCEE
T ss_pred CChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCC-CCCCCCCcCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999864 246889999999
Q ss_pred CCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 331 ESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 331 ~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
.||+|+++|.+++++||+.|+|+++.
T Consensus 458 ~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 458 KSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp TTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCcCccHHHHHHhhceEEEEEeC
Confidence 99999999999999999999998875
No 24
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6e-81 Score=637.07 Aligned_cols=339 Identities=27% Similarity=0.447 Sum_probs=325.3
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~ 91 (397)
+...+++|+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.
T Consensus 153 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~ 232 (515)
T 2d4e_A 153 DWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEA 232 (515)
T ss_dssp TEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTH
T ss_pred CceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHH
Confidence 446789999999999999999999999999999999999999999999999999999999999 99999999999 5678
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 170 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v 170 (397)
++.|++|+ +|+|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||
T Consensus 233 g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 311 (515)
T 2d4e_A 233 GAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRL 311 (515)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEE
T ss_pred HHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEE
Confidence 89999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCC---------CCcc
Q 015976 171 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK---------NKLR 239 (397)
Q Consensus 171 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~---------~~~~ 239 (397)
|||++++|+|+++|+++++++++|+|.+ ++++||+++++++++++++++++. +|+++++||.... .|+|
T Consensus 312 lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~ 391 (515)
T 2d4e_A 312 LVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNY 391 (515)
T ss_dssp EEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTC
T ss_pred EEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCce
Confidence 9999999999999999999999999998 899999999999999999999998 7899999998643 5899
Q ss_pred ccceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCccccc
Q 015976 240 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL 319 (397)
Q Consensus 240 ~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~ 319 (397)
++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..
T Consensus 392 ~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-- 468 (515)
T 2d4e_A 392 LLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV-- 468 (515)
T ss_dssp BCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--
T ss_pred eCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--
Confidence 99999999 999999999999999999999999999999999999999999999999999999999999999999653
Q ss_pred CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 320 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 320 ~~~~~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
..+.+||||+|.||+|+++|.+++++|++.|+|..+.
T Consensus 469 ~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 469 RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 4688999999999999999999999999999998874
No 25
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.6e-81 Score=643.57 Aligned_cols=341 Identities=25% Similarity=0.432 Sum_probs=326.6
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~ 91 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.
T Consensus 163 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~ 242 (538)
T 3qan_A 163 GEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEV 242 (538)
T ss_dssp TEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTT
T ss_pred CcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHH
Confidence 567899999999999999999999999999999999999999999999999999999999998 99999999999 6678
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHhcc------cCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcc
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 164 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~------~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C 164 (397)
++.|++|+ +|+|.||||+++|+.|++.++++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|
T Consensus 243 g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C 321 (538)
T 3qan_A 243 GDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKC 321 (538)
T ss_dssp HHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCST
T ss_pred HHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCC
Confidence 99999997 99999999999999999999988 9999999999999999999999999999999999 9999999
Q ss_pred ccCCEEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCC-CCcccc
Q 015976 165 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIA 241 (397)
Q Consensus 165 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~-~~~~~~ 241 (397)
++++|||||++++|+|+++|+++++++++|+|.| ++++||++++++++++.+++++++ +| ++++||..+. .|+|++
T Consensus 322 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~ 400 (538)
T 3qan_A 322 SAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQ 400 (538)
T ss_dssp TCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEEC
T ss_pred ccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeC
Confidence 9999999999999999999999999999999998 999999999999999999999998 66 9999998754 699999
Q ss_pred ceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCC
Q 015976 242 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 321 (397)
Q Consensus 242 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~ 321 (397)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+...
T Consensus 401 PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~ 480 (538)
T 3qan_A 401 PTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIV 480 (538)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCT
T ss_pred CeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999954434447
Q ss_pred CCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEcC
Q 015976 322 HSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 322 ~~~pfgG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~ 356 (397)
+.+||||+|.||+| +++|.+++++||+.|+|.++.
T Consensus 481 ~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 481 GYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp TTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 89999999999999 999999999999999998865
No 26
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=6.7e-81 Score=632.64 Aligned_cols=339 Identities=26% Similarity=0.454 Sum_probs=324.6
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCC-hHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA-VAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~-~~~ 91 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|+ .+.
T Consensus 133 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 212 (479)
T 2imp_A 133 GENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETV 212 (479)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTH
T ss_pred CceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHH
Confidence 446789999999999999999999999999999999999999999999999999999999999 999999999994 567
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 170 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v 170 (397)
++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++|
T Consensus 213 ~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv 291 (479)
T 2imp_A 213 GQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERV 291 (479)
T ss_dssp HHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEE
T ss_pred HHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEE
Confidence 89999996 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHHhhcCCCCCC--CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-CCCccccceEEe
Q 015976 171 ITTKDYAPKLLESLKNELENFYGKNPLE--SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLLL 246 (397)
Q Consensus 171 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~--~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-~~~~~~~Ptil~ 246 (397)
|||++++|+|+++|+++++++++|+|.| ++++||++++++++++++++++++ +|+++++||... ..|+|++|||+.
T Consensus 292 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~ 371 (479)
T 2imp_A 292 YVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLL 371 (479)
T ss_dssp EEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEE
T ss_pred EEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEe
Confidence 9999999999999999999999999986 899999999999999999999998 788999999763 358999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ .+.+||
T Consensus 372 ~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~Pf 449 (479)
T 2imp_A 372 DVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFH 449 (479)
T ss_dssp SCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCB
T ss_pred CCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997654 589999
Q ss_pred ccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 327 GGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 327 gG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
||+|.||+|+++|.+++++|++.|+|..+
T Consensus 450 GG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 450 AGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp CCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99999999999999999999999999764
No 27
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.1e-81 Score=635.56 Aligned_cols=340 Identities=26% Similarity=0.446 Sum_probs=310.4
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHH-HHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS-SLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~-~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++ .++++++.++ +|+|++|+|+| +.+
T Consensus 139 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~ 218 (508)
T 3r64_A 139 GKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSE 218 (508)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTT
T ss_pred CceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHH
Confidence 45788999999999999999999999999999999999999999999999999 9999999999 99999999999 478
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhc--ccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccC
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISP 167 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~--~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~ 167 (397)
.++.|++|+ +|+|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++
T Consensus 219 ~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~ 297 (508)
T 3r64_A 219 IGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSI 297 (508)
T ss_dssp THHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCC
T ss_pred HHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccC
Confidence 999999997 9999999999999999999998 89999999999999999999999999999999999 9999999999
Q ss_pred CEEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCccccceEE
Q 015976 168 DHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLL 245 (397)
Q Consensus 168 ~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~~~~Ptil 245 (397)
++||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||.. .|+|+.|||+
T Consensus 298 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl 375 (508)
T 3r64_A 298 NRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVF 375 (508)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEE
T ss_pred cEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEE
Confidence 9999999999999999999999999999998 899999999999999999999998 78999999976 6899999999
Q ss_pred ecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCC
Q 015976 246 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 325 (397)
Q Consensus 246 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~p 325 (397)
.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.+ ..+.+|
T Consensus 376 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~P 454 (508)
T 3r64_A 376 SDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVM 454 (508)
T ss_dssp EEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-----------
T ss_pred ecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998754 468899
Q ss_pred cccCCCCCCCCcchHHHHHHhhhccEEEEcCc
Q 015976 326 FGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 326 fgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
|||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 455 fGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 455 FGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp ----------CCCHHHHHHHTEEEEEEEEECC
T ss_pred cCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 99999999999999999999999999998753
No 28
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=7.9e-81 Score=630.08 Aligned_cols=340 Identities=24% Similarity=0.424 Sum_probs=327.5
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 92 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~ 92 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.+.+
T Consensus 117 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~ 196 (462)
T 3etf_A 117 NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGV 196 (462)
T ss_dssp GGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHH
T ss_pred CceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999998 9999999999988889
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEE
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 171 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~ 171 (397)
..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||
T Consensus 197 ~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl 275 (462)
T 3etf_A 197 SQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFI 275 (462)
T ss_dssp HHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEE
T ss_pred HHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEE
Confidence 9999996 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCcc-CCCCccccceEEecC
Q 015976 172 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLLDV 248 (397)
Q Consensus 172 V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~-~~~~~~~~Ptil~~~ 248 (397)
||++++|+|+++|+++++++++|+|.+ ++++||+++++++++++++++++. +|+++++||.. +..|+|++|||+.++
T Consensus 276 V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v 355 (462)
T 3etf_A 276 VEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADV 355 (462)
T ss_dssp EEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESC
T ss_pred EehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECC
Confidence 999999999999999999999999998 899999999999999999999998 78999999975 356899999999999
Q ss_pred CCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCccc
Q 015976 249 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 328 (397)
Q Consensus 249 ~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfgG 328 (397)
+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||
T Consensus 356 ~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~PfGG 433 (462)
T 3etf_A 356 TPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSA--SDARVAFGG 433 (462)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCC--CCTTSCBCC
T ss_pred CCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999753 468999999
Q ss_pred CCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 329 VQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 329 ~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
+|.||+|+++|.+++++||+.|+|++++
T Consensus 434 ~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 434 VKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred cCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999999999998764
No 29
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2e-80 Score=631.16 Aligned_cols=341 Identities=28% Similarity=0.435 Sum_probs=327.6
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+
T Consensus 132 ~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~ 211 (490)
T 2ve5_A 132 ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGRE 211 (490)
T ss_dssp TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTT
T ss_pred CCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChH
Confidence 3556789999999999999999999999999999999999999999999999999999999999 99999999999 778
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHH-hcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCC
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAA-AKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 168 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~-~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~ 168 (397)
.++.|+.|+ +|+|+||||+++|+.+++.+ ++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++
T Consensus 212 ~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~ 290 (490)
T 2ve5_A 212 VGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGT 290 (490)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCC
T ss_pred HHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCccCCC
Confidence 899999997 99999999999999999999 8999999999999999999999999999999999999 99999999999
Q ss_pred EEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-----CCCcccc
Q 015976 169 HIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-----KNKLRIA 241 (397)
Q Consensus 169 ~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-----~~~~~~~ 241 (397)
+||||++++|+|+++|+++++++++|+|.| ++++||++++++++++.++++++. +|+++++||... ..|+|++
T Consensus 291 rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~ 370 (490)
T 2ve5_A 291 RVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVA 370 (490)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBC
T ss_pred eEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEc
Confidence 999999999999999999999999999998 899999999999999999999998 789999999762 3589999
Q ss_pred ceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCC
Q 015976 242 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 321 (397)
Q Consensus 242 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~ 321 (397)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..
T Consensus 371 Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~--~~ 448 (490)
T 2ve5_A 371 PTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SP 448 (490)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CC
T ss_pred cEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999754 36
Q ss_pred CCCCcccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 322 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 322 ~~~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 449 ~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 449 AEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 89999999999999999999999999999998864
No 30
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=6.3e-81 Score=632.32 Aligned_cols=335 Identities=30% Similarity=0.532 Sum_probs=320.5
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-----cCCCCcEEEeC-
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-----MDLSSIRVVEG- 87 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-----lP~g~v~~v~g- 87 (397)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+|+|
T Consensus 121 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~ 200 (486)
T 3pqa_A 121 DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGA 200 (486)
T ss_dssp TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSC
T ss_pred CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCC
Confidence 557889999999999999999999999999999999999999999999999999999999888 99999999999
Q ss_pred ChHhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcccc
Q 015976 88 AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 166 (397)
Q Consensus 88 ~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a 166 (397)
+.+.++.|++|+ +|+|.||||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|++
T Consensus 201 ~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a 277 (486)
T 3pqa_A 201 GEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCIS 277 (486)
T ss_dssp TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTS
T ss_pred chHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccC
Confidence 456689999996 999999999999999998877 8999999999999999999999999999999999 999999999
Q ss_pred CCEEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCccccceE
Q 015976 167 PDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTL 244 (397)
Q Consensus 167 ~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~~~~Pti 244 (397)
+++||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++++++++++ +|+++++||.. .|+|++|||
T Consensus 278 ~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptv 355 (486)
T 3pqa_A 278 VGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTI 355 (486)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEE
T ss_pred CcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEE
Confidence 99999999999999999999999999999998 899999999999999999999998 78999999975 589999999
Q ss_pred EecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCC
Q 015976 245 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 324 (397)
Q Consensus 245 l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~ 324 (397)
+ +++++|++++||+||||++|++|+| ||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.+. .+.+
T Consensus 356 l-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~ 432 (486)
T 3pqa_A 356 L-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFR-QDNM 432 (486)
T ss_dssp E-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCC-CTTS
T ss_pred E-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcC-CCCC
Confidence 9 9999999999999999999999999 99999999999999999999999999999999999999999986532 4589
Q ss_pred CcccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 325 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 325 pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 433 PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 433 PFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp CBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999998875
No 31
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=8e-81 Score=631.29 Aligned_cols=349 Identities=26% Similarity=0.419 Sum_probs=331.8
Q ss_pred CcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhHH
Q 015976 15 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETS 93 (397)
Q Consensus 15 ~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~~ 93 (397)
...+.+++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++++++|+.+.+.
T Consensus 118 ~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~ 197 (474)
T 4h7n_A 118 IALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGA 197 (474)
T ss_dssp EEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHH
T ss_pred ccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccccchhhh
Confidence 35567889999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred HHHhCCCCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEEEe
Q 015976 94 ALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 173 (397)
Q Consensus 94 ~L~~~~v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~ 173 (397)
.|+.| +|+|.||||+.+|+.+++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||
T Consensus 198 ~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~ 275 (474)
T 4h7n_A 198 NLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAV-VNTGQSCLSIERIYVA 275 (474)
T ss_dssp HHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEE
T ss_pred hhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhc-cCCCCceeecccccch
Confidence 99976 999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC--CCCccccceEEecCC
Q 015976 174 KDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLLDVP 249 (397)
Q Consensus 174 ~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~--~~~~~~~Ptil~~~~ 249 (397)
++++|+|+++|++++++++.|+|.+ ++++||++++.+.++++++++++. +|+++++||... ..|+|++|||+.+++
T Consensus 276 ~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~ 355 (474)
T 4h7n_A 276 ESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVN 355 (474)
T ss_dssp GGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCC
T ss_pred HHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeec
Confidence 9999999999999999999999998 899999999999999999999998 788999999864 468999999999999
Q ss_pred CCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCcccC
Q 015976 250 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGV 329 (397)
Q Consensus 250 ~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfgG~ 329 (397)
++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+...+.+||||+
T Consensus 356 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~ 435 (474)
T 4h7n_A 356 HSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAF 435 (474)
T ss_dssp TTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCC
T ss_pred cccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999887777789999999
Q ss_pred CCCCCC-CcchHHHHHHhhhccEEEEcCccCCCCCcC
Q 015976 330 QESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRY 365 (397)
Q Consensus 330 ~~SG~G-~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~ 365 (397)
|.||+| +++|.+++++|++.|+|+++....+.|.+|
T Consensus 436 ~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 436 NFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp GGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred CCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 999998 789999999999999999987555555544
No 32
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.1e-80 Score=633.23 Aligned_cols=335 Identities=21% Similarity=0.402 Sum_probs=322.2
Q ss_pred cceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhHHH
Q 015976 16 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 94 (397)
Q Consensus 16 ~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~~~ 94 (397)
..+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+|+.+.++.
T Consensus 150 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~ 229 (501)
T 1uxt_A 150 EGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK 229 (501)
T ss_dssp EEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHH
T ss_pred eEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999999999 999999999996688899
Q ss_pred HHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEEEe
Q 015976 95 LLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 173 (397)
Q Consensus 95 L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~ 173 (397)
|++|+ +|+|.||||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||
T Consensus 230 L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~ 306 (501)
T 1uxt_A 230 IVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAE 306 (501)
T ss_dssp HHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEE
T ss_pred HHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEec
Confidence 99996 999999999999999999887 8999999999999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCC-ccccceEEecCC-
Q 015976 174 KDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNK-LRIAPTLLLDVP- 249 (397)
Q Consensus 174 ~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~-~~~~Ptil~~~~- 249 (397)
++++|+|+++|+++++++++|||.| ++++||+++++++++++++++++. +|+++++||.. .| +|++|||+.+++
T Consensus 307 ~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~ 384 (501)
T 1uxt_A 307 RPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPAD 384 (501)
T ss_dssp HHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHH
T ss_pred cchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCC
Confidence 9999999999999999999999998 999999999999999999999998 78899999976 57 999999999999
Q ss_pred --CCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCcc
Q 015976 250 --RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 327 (397)
Q Consensus 250 --~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfg 327 (397)
++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++ +...+.+|||
T Consensus 385 ~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfG 463 (501)
T 1uxt_A 385 RVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFG 463 (501)
T ss_dssp HHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBC
T ss_pred CCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999974 3356899999
Q ss_pred cCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 328 GVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 328 G~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
|+|.||+|+++|.+++++|++.|+|..+.
T Consensus 464 G~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 464 GRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp CEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred CcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 99999999999999999999999998875
No 33
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=7.5e-81 Score=632.76 Aligned_cols=340 Identities=27% Similarity=0.469 Sum_probs=325.9
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEe---C-
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE---G- 87 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~---g- 87 (397)
.+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+|+ |
T Consensus 136 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~ 215 (487)
T 2w8n_A 136 KDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKN 215 (487)
T ss_dssp TTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHH
T ss_pred CCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCC
Confidence 3556789999999999999999999999999999999999999999999999999999999999 9999999999 8
Q ss_pred ChHhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcccc
Q 015976 88 AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 166 (397)
Q Consensus 88 ~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a 166 (397)
+.+.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++
T Consensus 216 ~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a 294 (487)
T 2w8n_A 216 AKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVC 294 (487)
T ss_dssp HHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSE
T ss_pred cHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCcccc
Confidence 567889999997 999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCEEEEeCCchHHHHHHHHHHHHh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCc-cccc
Q 015976 167 PDHIITTKDYAPKLLESLKNELEN-FYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKL-RIAP 242 (397)
Q Consensus 167 ~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~-~~~P 242 (397)
+++||||++++|+|+++|++++++ +++|+|.+ ++++||+++++++++++++++++. +|+++++||.....|+ |++|
T Consensus 295 ~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~P 374 (487)
T 2w8n_A 295 SNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEP 374 (487)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCC
T ss_pred CCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECC
Confidence 999999999999999999999999 99999998 899999999999999999999998 7899999998755688 9999
Q ss_pred eEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCC
Q 015976 243 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 322 (397)
Q Consensus 243 til~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~ 322 (397)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ .+
T Consensus 375 tvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~ 452 (487)
T 2w8n_A 375 TLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS--SV 452 (487)
T ss_dssp EEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC--CT
T ss_pred EEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997654 46
Q ss_pred CCCcccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 323 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 323 ~~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
.+||||+|.||+|+++|.+++++|++.|+|..+
T Consensus 453 ~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 453 ECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp TSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred CCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 799999999999999999999999999999874
No 34
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.3e-80 Score=631.12 Aligned_cols=338 Identities=18% Similarity=0.284 Sum_probs=321.2
Q ss_pred cceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHh----h-cCCCCcEEEeCChH
Q 015976 16 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE----Y-MDLSSIRVVEGAVA 90 (397)
Q Consensus 16 ~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~----a-lP~g~v~~v~g~~~ 90 (397)
..+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|+|+.+
T Consensus 150 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~ 229 (500)
T 2j6l_A 150 ALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGAD 229 (500)
T ss_dssp EEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHH
T ss_pred eeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHH
Confidence 457889999999999999999999999999999999999999999999999999888765 4 99999999999878
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 230 ~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~r 308 (500)
T 2j6l_A 230 IGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARR 308 (500)
T ss_dssp HHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEE
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcE
Confidence 899999986 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCcc-CCCCccccceEEe
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-DKNKLRIAPTLLL 246 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~-~~~~~~~~Ptil~ 246 (397)
||||++++|+|+++|++++++++.|+|.+ ++++||++++++++++++++++++ +|+++++||.. +..|+|++|||+.
T Consensus 309 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~ 388 (500)
T 2j6l_A 309 LFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVT 388 (500)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEE
T ss_pred EEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEE
Confidence 99999999999999999999999999998 999999999999999999999998 78999999976 3468999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH--HHcccCeEEEcCcccccCCCCC
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV--ETVSAGGLVINDTAVHLAVHSL 324 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~g~v~IN~~~~~~~~~~~ 324 (397)
+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++ +++++|+|+||++.. ...+.+
T Consensus 389 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~-~~~~~~ 467 (500)
T 2j6l_A 389 GLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTS-GAEIGG 467 (500)
T ss_dssp SCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTT-CCCTTS
T ss_pred CCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCc-cCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 779999999998653 245789
Q ss_pred CcccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 325 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 325 pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 468 PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 468 AFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp EECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred CcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999874
No 35
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=3.7e-80 Score=631.84 Aligned_cols=340 Identities=24% Similarity=0.414 Sum_probs=323.3
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAE 91 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~ 91 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+.
T Consensus 164 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~ 243 (516)
T 1uzb_A 164 GEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEV 243 (516)
T ss_dssp TEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHH
T ss_pred CceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchh
Confidence 446789999999999999999999999999999999999999999999999999999999999 99999999999 6788
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHh------cccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcc
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 164 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~------~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C 164 (397)
++.|++|+ +|+|.||||+++|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++| .|+||.|
T Consensus 244 ~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C 322 (516)
T 1uzb_A 244 GAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKC 322 (516)
T ss_dssp HHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCST
T ss_pred hhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCcc
Confidence 99999997 999999999999999999998 789999999999999999999999999999999999 9999999
Q ss_pred ccCCEEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCcc-CCCCccccc
Q 015976 165 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAP 242 (397)
Q Consensus 165 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~-~~~~~~~~P 242 (397)
++++|||||++++|+|+++|+++++++++|+| + ++++||+++++++++++++++++...+++++||.. +..|+|++|
T Consensus 323 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~P 401 (516)
T 1uzb_A 323 SAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAP 401 (516)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCC
T ss_pred ccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECC
Confidence 99999999999999999999999999999999 7 99999999999999999999999844489999976 346899999
Q ss_pred eEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCC
Q 015976 243 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 322 (397)
Q Consensus 243 til~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~ 322 (397)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+...+
T Consensus 402 tvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~ 481 (516)
T 1uzb_A 402 TVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVG 481 (516)
T ss_dssp EEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTT
T ss_pred EEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976655568
Q ss_pred CCCcccCCCCCCCC-cchHHHHHHhhhccEEEEc
Q 015976 323 SLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 323 ~~pfgG~~~SG~G~-~~g~~~l~~~t~~k~v~~~ 355 (397)
.+||||+|.||+|+ ++|.+++++|++.|+|.++
T Consensus 482 ~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 482 VQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp TSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred CCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 89999999999995 7899999999999999763
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3e-80 Score=629.10 Aligned_cols=339 Identities=23% Similarity=0.406 Sum_probs=303.2
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHH-HHHHHHHHhh-cCCCCcEEEeCCh-H
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS-SLLAKLVGEY-MDLSSIRVVEGAV-A 90 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~-~~~~~~~~~a-lP~g~v~~v~g~~-~ 90 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++ .++++++.++ +|+|++|+++|+. +
T Consensus 134 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~ 213 (485)
T 4dng_A 134 GKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKE 213 (485)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHH
T ss_pred CceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChh
Confidence 45779999999999999999999999999999999999999999999999999 9999999999 9999999999965 5
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 169 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~ 169 (397)
.++.|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++
T Consensus 214 ~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~r 292 (485)
T 4dng_A 214 IGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINR 292 (485)
T ss_dssp HTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEE
T ss_pred HHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCE
Confidence 889999997 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCccccceEEec
Q 015976 170 IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLD 247 (397)
Q Consensus 170 v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~~~~Ptil~~ 247 (397)
||||++++|+|+++|+++++++++|+|.| ++++||++++++++++++++++++ +|+++++||.. .|+|++|||+.+
T Consensus 293 vlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~ 370 (485)
T 4dng_A 293 IIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVG 370 (485)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEES
T ss_pred EEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEec
Confidence 99999999999999999999999999998 899999999999999999999998 78999999976 689999999999
Q ss_pred CCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCcc
Q 015976 248 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 327 (397)
Q Consensus 248 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfg 327 (397)
++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ ..+.+|||
T Consensus 371 v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfG 449 (485)
T 4dng_A 371 ADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFG 449 (485)
T ss_dssp CCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------
T ss_pred CCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998654 46899999
Q ss_pred cCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 328 GVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 328 G~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
|+|.||+|+++|.+++++||+.|+|+++.
T Consensus 450 G~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 450 GNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp -----------CHHHHHHHEEEEEEEEEC
T ss_pred CcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999998864
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1e-79 Score=623.43 Aligned_cols=334 Identities=26% Similarity=0.450 Sum_probs=320.4
Q ss_pred Ccc-eEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCC-hHh
Q 015976 15 SSA-EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA-VAE 91 (397)
Q Consensus 15 ~~~-~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~-~~~ 91 (397)
... +++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+ .+.
T Consensus 134 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~ 213 (475)
T 1euh_A 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEI 213 (475)
T ss_dssp TEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHH
T ss_pred ceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHH
Confidence 355 89999999999999999999999999999999999999999999999999999999999 999999999995 567
Q ss_pred HHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEE
Q 015976 92 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 170 (397)
Q Consensus 92 ~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v 170 (397)
++.|++|+ +|+|.||||+++|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++|
T Consensus 214 ~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv 290 (475)
T 1euh_A 214 GDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRV 290 (475)
T ss_dssp HHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEE
T ss_pred HHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEE
Confidence 89999997 999999999999999999887 8999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCccccceEEecCC
Q 015976 171 ITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVP 249 (397)
Q Consensus 171 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~~~~Ptil~~~~ 249 (397)
|||++++|+|+++|+++++++++|+|.+++++||+++++++++++++++++. +|+++++||.. .|+|++|||+.+++
T Consensus 291 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~ 368 (475)
T 1euh_A 291 LVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVT 368 (475)
T ss_dssp EEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCC
T ss_pred EEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCC
Confidence 9999999999999999999999999988999999999999999999999998 78899999976 58999999999999
Q ss_pred CCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcC-cccccCCCCCCccc
Q 015976 250 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND-TAVHLAVHSLPFGG 328 (397)
Q Consensus 250 ~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~-~~~~~~~~~~pfgG 328 (397)
++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ +..+ .+.+||||
T Consensus 369 ~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG 446 (475)
T 1euh_A 369 TDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLG 446 (475)
T ss_dssp TTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCC
T ss_pred CcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 5543 58999999
Q ss_pred CCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 329 VQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 329 ~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
+|.||+|+++|.+++++|++.|+|+.+
T Consensus 447 ~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 447 AKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp EETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999875
No 38
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-79 Score=623.10 Aligned_cols=340 Identities=25% Similarity=0.375 Sum_probs=324.7
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 92 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~ 92 (397)
+...+++|+|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+|+|+.+.+
T Consensus 132 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 211 (486)
T 1t90_A 132 DVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVV 211 (486)
T ss_dssp TEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHH
T ss_pred CceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHH
Confidence 446689999999999999999999999999999999999999999999999999999999999 9999999999988889
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCE-E
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-I 170 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~-v 170 (397)
..|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++ |
T Consensus 212 ~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv 290 (486)
T 1t90_A 212 NGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVT 290 (486)
T ss_dssp HHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEE
T ss_pred HHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeE
Confidence 9999997 999999999999999999999999999999999999999999999999999999999 999999999999 9
Q ss_pred EEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC--CCCccccceEEe
Q 015976 171 ITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD--KNKLRIAPTLLL 246 (397)
Q Consensus 171 ~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~--~~~~~~~Ptil~ 246 (397)
+||++ +|+|+++|+++++++++|+|.+ ++++||++++++++++.++++++. +|+++++||... ..|+|+.|||+.
T Consensus 291 ~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~ 369 (486)
T 1t90_A 291 VEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFD 369 (486)
T ss_dssp EEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEE
T ss_pred EecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEe
Confidence 99999 9999999999999999999988 899999999999999999999998 789999999742 358999999999
Q ss_pred cCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCc
Q 015976 247 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 326 (397)
Q Consensus 247 ~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pf 326 (397)
+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+.. +...+.+||
T Consensus 370 ~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~~~~Pf 448 (486)
T 1t90_A 370 NVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGV-PAPMAFFPF 448 (486)
T ss_dssp SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC-CCCCTTSCC
T ss_pred CCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999854 333578999
Q ss_pred ccCCCCCCC--CcchHHHHHHhhhccEEEEcC
Q 015976 327 GGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 327 gG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 356 (397)
||+|.||+| +++|.+++++|++.|+|..++
T Consensus 449 GG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 449 SGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp CCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 999999999 899999999999999998864
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.2e-79 Score=623.63 Aligned_cols=336 Identities=26% Similarity=0.484 Sum_probs=299.9
Q ss_pred CcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChHhH
Q 015976 15 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAET 92 (397)
Q Consensus 15 ~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~~~ 92 (397)
...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++.+++++++++ +|+|++|+++| +.+.+
T Consensus 131 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~ 210 (478)
T 3ty7_A 131 GDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVG 210 (478)
T ss_dssp TTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTH
T ss_pred ccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999 99999999999 66889
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEEE
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 171 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~ 171 (397)
+.|+.|+ +|+|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||
T Consensus 211 ~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvl 289 (478)
T 3ty7_A 211 NPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVL 289 (478)
T ss_dssp HHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEE
T ss_pred HHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEE
Confidence 9999996 999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCcc-C---CCCccccceEE
Q 015976 172 TTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-D---KNKLRIAPTLL 245 (397)
Q Consensus 172 V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~-~---~~~~~~~Ptil 245 (397)
||++++|+|+++|+++++++++|+|.+ ++++||+++++++++++++++++. +|+++++||.. . ..|+|++|||+
T Consensus 290 V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl 369 (478)
T 3ty7_A 290 VPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIF 369 (478)
T ss_dssp EETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEE
T ss_pred EcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEE
Confidence 999999999999999999999999998 899999999999999999999997 78999999943 2 36899999999
Q ss_pred ecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCC
Q 015976 246 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 325 (397)
Q Consensus 246 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~p 325 (397)
.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ . ...+.+|
T Consensus 370 ~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~--~~~~~~P 446 (478)
T 3ty7_A 370 INVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A--GRKPDLP 446 (478)
T ss_dssp ESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C--C------
T ss_pred ecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 2 2457899
Q ss_pred cccCCCCCCCCcchHHHHHHhhhccEEEE
Q 015976 326 FGGVQESGMGAYHGKFSFDVFSHKKAVLS 354 (397)
Q Consensus 326 fgG~~~SG~G~~~g~~~l~~~t~~k~v~~ 354 (397)
|||+|.||+|+++|.+++++||+.|+|+.
T Consensus 447 fGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 447 FGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp ----------------CCGGGEEEEEEET
T ss_pred cCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 99999999999999999999999999873
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=3.5e-78 Score=620.27 Aligned_cols=349 Identities=21% Similarity=0.311 Sum_probs=325.4
Q ss_pred cceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCC-hHhHH
Q 015976 16 SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA-VAETS 93 (397)
Q Consensus 16 ~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~-~~~~~ 93 (397)
..++++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.+++++++++ +|+|++|+|+|+ .+.++
T Consensus 193 ~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~ 271 (563)
T 4e3x_A 193 NHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGD 271 (563)
T ss_dssp EEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHH
T ss_pred ceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHH
Confidence 356677888999999999999999999999999 599999999999999999999999999 999999999995 56789
Q ss_pred HHHhCC-CCeEEEECCHHHHHHHHHHHhcccCc------hhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcccc
Q 015976 94 ALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 166 (397)
Q Consensus 94 ~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~------~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a 166 (397)
.|+.|+ +++|.||||+++|+.|++.+++++|| +++|+|||||+||++|||++.|++.+++|+| .|+||.|++
T Consensus 272 ~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A 350 (563)
T 4e3x_A 272 TVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSA 350 (563)
T ss_dssp HHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTC
T ss_pred HHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcC
Confidence 999996 99999999999999999999999885 9999999999999999999999999999999 999999999
Q ss_pred CCEEEEeCCchHHHHHHHHHHHHhhcCCCC-CC-CCcccccCCHHHHHHHHHHHHHhh--hcCeEeeCCccC-CCCcccc
Q 015976 167 PDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERD-KNKLRIA 241 (397)
Q Consensus 167 ~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~~~i~~a~--~g~~v~~gg~~~-~~~~~~~ 241 (397)
++|+|||+++||+|+++|+++++++++||| .| ++++||++++++++++.+++++++ +|+++++||..+ ..|+|++
T Consensus 351 ~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~ 430 (563)
T 4e3x_A 351 CSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVE 430 (563)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEEC
T ss_pred CcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEec
Confidence 999999999999999999999999999999 88 999999999999999999999998 578999999764 4689999
Q ss_pred ceEEecCCCCCcccccccccCccceEeeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHHHcc--cCeEEEcCcc
Q 015976 242 PTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTA 316 (397)
Q Consensus 242 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~v~IN~~~ 316 (397)
|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+.+
T Consensus 431 PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~ 510 (563)
T 4e3x_A 431 PCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKS 510 (563)
T ss_dssp CEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCS
T ss_pred CEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCC
Confidence 999999999999999999999999999996 79999999 789999999999999999999999975 9999999987
Q ss_pred cccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEcCccCCCCCcCCC
Q 015976 317 VHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPP 367 (397)
Q Consensus 317 ~~~~~~~~pfgG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~ 367 (397)
++...+.+||||+|.||+| +++|.+++++|++.|+|..+ |..+.+.+||.
T Consensus 511 ~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~yp~ 561 (563)
T 4e3x_A 511 TGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRYSY 561 (563)
T ss_dssp CCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSCTT
T ss_pred CCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccCCC
Confidence 6666789999999999998 89999999999999999876 44455566654
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.2e-76 Score=598.00 Aligned_cols=334 Identities=23% Similarity=0.327 Sum_probs=316.4
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 92 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~ 92 (397)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.+.+
T Consensus 130 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~ 209 (490)
T 3ju8_A 130 DATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETG 209 (490)
T ss_dssp TEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHH
T ss_pred CCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHH
Confidence 345678899999999999999999999999999999999999999999999999999999999 9999999999988999
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCch-hhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCCEE
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 170 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~-~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v 170 (397)
+.|+.|+ +|+|.||||+++|+.|++.+++++||+ ++|+|||||+||++|||++.|++.+++++| .|+||.|++++++
T Consensus 210 ~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 288 (490)
T 3ju8_A 210 VALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRL 288 (490)
T ss_dssp HHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEE
T ss_pred HHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEE
Confidence 9999997 999999999999999999999999998 799999999999999999999999999999 9999999999999
Q ss_pred EEeCCc-hHHHHHHHHHHHHhhcCCC-CCC-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC-CCCccccceEE
Q 015976 171 ITTKDY-APKLLESLKNELENFYGKN-PLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNKLRIAPTLL 245 (397)
Q Consensus 171 ~V~~~i-~d~f~~~l~~~~~~~~~g~-p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~-~~~~~~~Ptil 245 (397)
|||+++ +|+|+++|+++++++++|+ |.| ++++||+++++++++++++++++. +|+++++||... ..|+|++|||+
T Consensus 289 lV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl 368 (490)
T 3ju8_A 289 LVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGIL 368 (490)
T ss_dssp EEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEE
T ss_pred EEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEE
Confidence 999996 9999999999999999999 888 899999999999999999999998 789999999753 46899999999
Q ss_pred ecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCC
Q 015976 246 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 325 (397)
Q Consensus 246 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~p 325 (397)
. ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ...+.+|
T Consensus 369 ~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~P 446 (490)
T 3ju8_A 369 D-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAP 446 (490)
T ss_dssp E-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS-CCCTTSE
T ss_pred E-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC-CCCCCCC
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999999764 3357899
Q ss_pred cccCCCCCCCCcchHHHHHHhhhccEEEEcC
Q 015976 326 FGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 326 fgG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 356 (397)
|||+|.||.+ ++++|++.|+|++..
T Consensus 447 fGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 447 FGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp ECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred cCCccccchh------HHHhhheeEEEEEec
Confidence 9999999975 478999999988753
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=6.6e-76 Score=634.47 Aligned_cols=344 Identities=21% Similarity=0.350 Sum_probs=327.0
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeC-ChH
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVA 90 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g-~~~ 90 (397)
.+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.+++++++++ +|+|++|+|+| +.+
T Consensus 656 ~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~ 735 (1026)
T 4f9i_A 656 PGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSV 735 (1026)
T ss_dssp TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHH
T ss_pred CCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHH
Confidence 3557789999999999999999999999999999999999999999999999999999999999 99999999999 557
Q ss_pred hHHHHHhCC-CCeEEEECCHHHHHHHHHHHh------cccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCc
Q 015976 91 ETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 163 (397)
Q Consensus 91 ~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~------~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~ 163 (397)
.++.|++|+ ++.|+||||+++|+.|.+.++ +++||+++|+|||||+||++|||++.|++.+++|+| .|+||.
T Consensus 736 vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~ 814 (1026)
T 4f9i_A 736 MGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQK 814 (1026)
T ss_dssp HHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCS
T ss_pred HHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCC
Confidence 889999997 999999999999999999988 468999999999999999999999999999999999 999999
Q ss_pred cccCCEEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCC-Ccccc
Q 015976 164 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN-KLRIA 241 (397)
Q Consensus 164 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~-~~~~~ 241 (397)
|++++++|||++++|+|+++|+++++++++|+|.+ ++++||++++++++++.+++++++..+++++||..+.. |+|+.
T Consensus 815 C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~ 894 (1026)
T 4f9i_A 815 CSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVP 894 (1026)
T ss_dssp TTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCC
T ss_pred CCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceec
Confidence 99999999999999999999999999999999998 99999999999999999999999844499999987555 99999
Q ss_pred ceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCC
Q 015976 242 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 321 (397)
Q Consensus 242 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~ 321 (397)
|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+.+++...
T Consensus 895 PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~ 974 (1026)
T 4f9i_A 895 MTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALV 974 (1026)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCT
T ss_pred ceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998776667
Q ss_pred CCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEcCc
Q 015976 322 HSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 322 ~~~pfgG~~~SG~G~-~~g~~~l~~~t~~k~v~~~~~ 357 (397)
+.+||||+|.||+|+ .+|.+++++|++.|+|.++..
T Consensus 975 ~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 975 ERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp TTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEECC
T ss_pred CCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEecc
Confidence 899999999999995 688999999999999988753
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.2e-75 Score=601.17 Aligned_cols=337 Identities=18% Similarity=0.290 Sum_probs=311.5
Q ss_pred cceEeeeec-eEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh--cCCCCcEEEeCChHhH
Q 015976 16 SAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAET 92 (397)
Q Consensus 16 ~~~~~~~P~-Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a--lP~g~v~~v~g~~~~~ 92 (397)
..++.++|+ |||++|+|||||+++.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.+
T Consensus 143 ~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~-- 220 (534)
T 2y53_A 143 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA-- 220 (534)
T ss_dssp EEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT--
T ss_pred cceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChH--
Confidence 357889997 9999999999999999999999999999999999999999999999999997 69999999999532
Q ss_pred HHHHhC--CCCeEEEECCHHHHHHHHHHHh--cccCchhhccCCCCcEEEcCCC-----CHHHHHHHHHHHhhcCCCCCc
Q 015976 93 SALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKSPVVFDSGI-----NLKVACRRMIMGKWGCNNGQA 163 (397)
Q Consensus 93 ~~L~~~--~v~~v~ftGs~~~g~~v~~~~~--~~~~~~~~e~gG~~p~iV~~da-----Dl~~aa~~i~~~~~~~~~Gq~ 163 (397)
.+.++ .+|+|.||||+.+|+.|++.++ +++||+++|+|||||+||++|| |++.|++.+++++| .|+||.
T Consensus 221 -~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~ 298 (534)
T 2y53_A 221 -GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQK 298 (534)
T ss_dssp -TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCC
T ss_pred -HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCc
Confidence 24443 4999999999999999998765 8899999999999999999999 99999999999999 999999
Q ss_pred cccCCEEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccC-------C
Q 015976 164 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD-------K 235 (397)
Q Consensus 164 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~-------~ 235 (397)
|++++|||||++++|+|+++|+++++++++|||.| ++++||+++++++++++++++++.+|+++++||... .
T Consensus 299 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~ 378 (534)
T 2y53_A 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADAN 378 (534)
T ss_dssp TTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTT
T ss_pred ccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCC
Confidence 99999999999999999999999999999999998 999999999999999999999987789999999742 3
Q ss_pred CCccccceEEecCCCC--CcccccccccCccceEeeC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHc
Q 015976 236 NKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI-----EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 305 (397)
Q Consensus 236 ~~~~~~Ptil~~~~~~--~~i~~eE~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 305 (397)
.|+|++|||+.+++++ |++++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++
T Consensus 379 ~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 458 (534)
T 2y53_A 379 IAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALEL 458 (534)
T ss_dssp TSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHH
T ss_pred CCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHH
Confidence 5899999999999887 6899999999999999999 99 999999999999999999999999999999999
Q ss_pred --ccCeEEEcCcccc-------cCCCCCCcccCCCCCCCCc-chHHHHHHhhhccEEEEcC
Q 015976 306 --SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKKAVLSRG 356 (397)
Q Consensus 306 --~~g~v~IN~~~~~-------~~~~~~pfgG~~~SG~G~~-~g~~~l~~~t~~k~v~~~~ 356 (397)
++|+|+||++... ...+.+||||+|.||+|++ +|.+++++|++.|++...+
T Consensus 459 ~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 459 ADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp TTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred HhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 8999999986421 2357899999999999999 6999999999999987754
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.9e-74 Score=621.76 Aligned_cols=340 Identities=22% Similarity=0.363 Sum_probs=321.4
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhh-cCCCCcEEEeCChHhH
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET 92 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~a-lP~g~v~~v~g~~~~~ 92 (397)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+|+.+.+
T Consensus 640 g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~g 719 (1001)
T 3haz_A 640 GESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIG 719 (1001)
T ss_dssp TEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHHH
T ss_pred CCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchHH
Confidence 567789999999999999999999999999999999999999999999999999999999998 9999999999966559
Q ss_pred HHHHhCC-CCeEEEECCHHHHHHHHHHHhcc---cCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCC
Q 015976 93 SALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 168 (397)
Q Consensus 93 ~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~---~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~ 168 (397)
..|+.|+ +|+|+||||+++|+.|++.++++ +||+++|+|||||+||++|||++.|++.+++|+| .|+||.|++++
T Consensus 720 ~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f-~naGQ~C~A~~ 798 (1001)
T 3haz_A 720 AALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAF-RSAGQRCSALR 798 (1001)
T ss_dssp HHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEE
T ss_pred HHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHH-hCCCCCCCCCc
Confidence 9999997 99999999999999999998864 7999999999999999999999999999999999 99999999999
Q ss_pred EEEEeCCchHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCccccceEEec
Q 015976 169 HIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLD 247 (397)
Q Consensus 169 ~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~~~~Ptil~~ 247 (397)
+||||++++|+|+++|+++++++++|+|.+ ++++||++++++.+++.++++++...+++ +||..+..|+|+.|||+.+
T Consensus 799 rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v-~gg~~~~~G~fv~PTvl~~ 877 (1001)
T 3haz_A 799 LLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL-HFAGPAPEGCFVAPHIFEL 877 (1001)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-EEECCCCSSSCCCCEEEEC
T ss_pred eeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-eccccCCCCcEEeeEEecC
Confidence 999999999999999999999999999998 99999999999999999999999855588 8888776799999999984
Q ss_pred CCCCCcccccccccCccceEeeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCC
Q 015976 248 VPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 325 (397)
Q Consensus 248 ~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~p 325 (397)
+++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.++++++++++++|+|+||+++.+...+.+|
T Consensus 878 --~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~P 955 (1001)
T 3haz_A 878 --TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQP 955 (1001)
T ss_dssp --SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSC
T ss_pred --CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCC
Confidence 6788999999999999999996 799999999999999999999999999999999999999999987666678899
Q ss_pred cccCCCCCCC-CcchHHHHHHhhhccEEEEcCc
Q 015976 326 FGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 326 fgG~~~SG~G-~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
|||+|.||+| +.+|++++++|++.|+|+++..
T Consensus 956 FGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 956 FGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp BCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred CCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 9999999999 5688999999999999988753
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.8e-72 Score=576.85 Aligned_cols=329 Identities=18% Similarity=0.253 Sum_probs=304.1
Q ss_pred CcceEeeeeceEEEEEcCCchhhHHhH--HHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHH----hh-cCCCCcEEEeC
Q 015976 15 SSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG 87 (397)
Q Consensus 15 ~~~~~~~~P~Gvv~vi~p~n~P~~~~~--~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~----~a-lP~g~v~~v~g 87 (397)
...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|.++.++++++. ++ +|+|++|+|+|
T Consensus 161 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g 240 (528)
T 3v4c_A 161 QEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQG 240 (528)
T ss_dssp CCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeC
Confidence 456899999999999999999999865 899999999999999999999999999998765 45 99999999999
Q ss_pred -ChHhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhccc--CchhhccCCCCcEEEcCCC---CHHHHHHHHHHHhhcCCC
Q 015976 88 -AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNN 160 (397)
Q Consensus 88 -~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~--~~~~~e~gG~~p~iV~~da---Dl~~aa~~i~~~~~~~~~ 160 (397)
+.+.++.|++|+ +|+|.||||+.+|+.|++.+++++ ||+++|+|||||+||++|| |++.|++.+++++| .|+
T Consensus 241 ~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~ 319 (528)
T 3v4c_A 241 GSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGA 319 (528)
T ss_dssp CCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGG
T ss_pred CCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcC
Confidence 668899999997 999999999999999999999998 9999999999999999999 88999999999999 999
Q ss_pred CCccccCCEEEEeCC-chHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCcc
Q 015976 161 GQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR 239 (397)
Q Consensus 161 Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~~ 239 (397)
||.|++++|||||++ ++|+|+++|++++++++.+ +.+||++++++.++++++++ .+|+++++||.. .|+|
T Consensus 320 GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~ 390 (528)
T 3v4c_A 320 GQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRD 390 (528)
T ss_dssp GCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTE
T ss_pred CCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCce
Confidence 999999999999998 9999999999999988654 67899998888888888774 368899999975 6999
Q ss_pred ccceEEecCCCC---CcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHHHHHHcc--cCeEEE
Q 015976 240 IAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN--NKKLKQQFVETVS--AGGLVI 312 (397)
Q Consensus 240 ~~Ptil~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~--d~~~~~~~~~~l~--~g~v~I 312 (397)
++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+|
T Consensus 391 ~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~v 470 (528)
T 3v4c_A 391 ASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLV 470 (528)
T ss_dssp ECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEE
T ss_pred eccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 999999988887 899999999999999999999999999999999999999999 8999999999997 999999
Q ss_pred cCcccc-cCCCCCCccc-CCCCCCCCcc--hHHHHHHhhhccEEE
Q 015976 313 NDTAVH-LAVHSLPFGG-VQESGMGAYH--GKFSFDVFSHKKAVL 353 (397)
Q Consensus 313 N~~~~~-~~~~~~pfgG-~~~SG~G~~~--g~~~l~~~t~~k~v~ 353 (397)
|+++++ ...+.+|||| +|.||+|+++ |++++++|++.|++.
T Consensus 471 N~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 471 NGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp SSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred cCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence 997643 3468999999 9999999986 999999999998754
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.4e-71 Score=566.41 Aligned_cols=325 Identities=17% Similarity=0.236 Sum_probs=298.9
Q ss_pred cceEeeeeceEEEEEcCCchhhHHhH--HHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHH----hh-cCCCCcEEEeC-
Q 015976 16 SAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG- 87 (397)
Q Consensus 16 ~~~~~~~P~Gvv~vi~p~n~P~~~~~--~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~----~a-lP~g~v~~v~g- 87 (397)
..+++|+|+|||++|+|||||+++.+ +++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|
T Consensus 129 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~ 208 (510)
T 1ez0_A 129 DIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGN 208 (510)
T ss_dssp CEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred CceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 35799999999999999999999854 999999999999999999999999999999984 45 89999999999
Q ss_pred ChHhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhccc--CchhhccCCCCcEEEcCCCCHH--HHHHHHHHHhhcCCCCC
Q 015976 88 AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLELGGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQ 162 (397)
Q Consensus 88 ~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~--~~~~~e~gG~~p~iV~~daDl~--~aa~~i~~~~~~~~~Gq 162 (397)
+.+.++.|++|+ +|+|.||||+.+|+.|++.+++++ ||+++|+|||||+||++|||++ .|++.+++++| .|+||
T Consensus 209 ~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ 287 (510)
T 1ez0_A 209 QRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQ 287 (510)
T ss_dssp CTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGC
T ss_pred cHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCC
Confidence 678899999997 999999999999999999999886 9999999999999999999999 99999999999 99999
Q ss_pred ccccCCEEEEeCC-chHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhh--hcCeEeeCCccCCCCcc
Q 015976 163 ACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLR 239 (397)
Q Consensus 163 ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~--~g~~v~~gg~~~~~~~~ 239 (397)
.|++++|||||++ ++|+|+++|++++++++. ||++++.+.+++.++++++. +|+++++||. .|+|
T Consensus 288 ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~ 355 (510)
T 1ez0_A 288 FCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPC 355 (510)
T ss_dssp CTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTS
T ss_pred CcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCE
Confidence 9999999999999 999999999999998864 57888888999999998887 4789999997 3899
Q ss_pred ccceEEecCCCC---CcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCH--HHHHHHHHHc--ccCeEEE
Q 015976 240 IAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK--KLKQQFVETV--SAGGLVI 312 (397)
Q Consensus 240 ~~Ptil~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~--~~~~~~~~~l--~~g~v~I 312 (397)
++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+|. ++++++++++ ++|+|+|
T Consensus 356 ~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~i 435 (510)
T 1ez0_A 356 VASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVF 435 (510)
T ss_dssp BCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEE
T ss_pred ecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEE
Confidence 999999988777 99999999999999999999999999999999999999999987 7899999999 7999999
Q ss_pred cCccccc-CCCCCCccc-CCCCCCCCc--chHHHHHHhhhccEEE
Q 015976 313 NDTAVHL-AVHSLPFGG-VQESGMGAY--HGKFSFDVFSHKKAVL 353 (397)
Q Consensus 313 N~~~~~~-~~~~~pfgG-~~~SG~G~~--~g~~~l~~~t~~k~v~ 353 (397)
|++..+. ..+.+|||| ++.||+|+. +|.+++++|++.|++.
T Consensus 436 N~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 436 NGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9975432 357899999 789998854 8999999998887654
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.9e-68 Score=538.56 Aligned_cols=313 Identities=19% Similarity=0.218 Sum_probs=250.0
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHH----h----h-cCCCCcEE
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----E----Y-MDLSSIRV 84 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~----~----a-lP~g~v~~ 84 (397)
+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++.+++++++ + + +|+|++|+
T Consensus 117 ~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~v 194 (468)
T 1vlu_A 117 GLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQL 194 (468)
T ss_dssp TEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEE
T ss_pred CceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEE
Confidence 445789999999999999999 9 9999999999999999999999999999999999995 7 7 99999999
Q ss_pred EeCCh-HhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCC
Q 015976 85 VEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 162 (397)
Q Consensus 85 v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq 162 (397)
|+ +. +.++.|+.|+ +|+|.||||+++|+.|++.+ +||+++|+|||||+||++|||++.|++.+++++| .|+|
T Consensus 195 v~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~G- 268 (468)
T 1vlu_A 195 IE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDEDADLIKAKRISLDAKT-NYPA- 268 (468)
T ss_dssp CC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTC-C----
T ss_pred EC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCCCCHHHHHHHHHHHhc-CCCC-
Confidence 99 65 6788899997 99999999999999999876 6999999999999999999999999999999999 9999
Q ss_pred ccccCCEEEEeCCchHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH-HHHhhhcCeEeeCCccCCCCc
Q 015976 163 ACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL-LDDDKVSGKIVHGGERDKNKL 238 (397)
Q Consensus 163 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~~-i~~a~~g~~v~~gg~~~~~~~ 238 (397)
.|++++|||||+++ |+|+++|+++++++++ |||.+ +++ ++++. ++++||. |
T Consensus 269 ~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~~i~~a~---~~~~gG~----g- 323 (468)
T 1vlu_A 269 GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTAYFDKLN---ELGKLTE----A- 323 (468)
T ss_dssp -CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHHHHHHHH---HHTCCCH----H-
T ss_pred cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcccccccc---eeeccCC----C-
Confidence 99999999999999 9999999999999986 65421 344 55544 4667775 4
Q ss_pred cccceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccc
Q 015976 239 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 318 (397)
Q Consensus 239 ~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~ 318 (397)
+.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..
T Consensus 324 -~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~- 399 (468)
T 1vlu_A 324 -IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTR- 399 (468)
T ss_dssp -HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGG-
T ss_pred -CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCC-
Confidence 789987 7889999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred cCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEEEcCccCCCCCcCCCCch
Q 015976 319 LAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTK 370 (397)
Q Consensus 319 ~~~~~~pfg-----G~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~ 370 (397)
..+.+||| |+|.||+|++ |.+++++|++.|+|..+. .+.+ |||+.
T Consensus 400 -~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~----~~~r-~py~~ 449 (468)
T 1vlu_A 400 -FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD----GQVA-SDYLG 449 (468)
T ss_dssp -GCC-----------------------CCSGGGEEEEEEEECS----SCCS-CCC--
T ss_pred -CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC----CCcC-ccccc
Confidence 35788999 9999999999 999999999999998864 2455 78873
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-67 Score=533.75 Aligned_cols=322 Identities=17% Similarity=0.243 Sum_probs=293.5
Q ss_pred CCCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHH----HHhh-cCCCCcEEEeC
Q 015976 13 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL----VGEY-MDLSSIRVVEG 87 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~----~~~a-lP~g~v~~v~g 87 (397)
.+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++..++++ +.++ +|+|++|+|++
T Consensus 98 ~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g 177 (464)
T 3k9d_A 98 NEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTV 177 (464)
T ss_dssp TTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSS
T ss_pred CCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 456778999999999999999999999999999999999999999999999999876654 5677 99999999999
Q ss_pred -ChHhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccC-CCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcc
Q 015976 88 -AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 164 (397)
Q Consensus 88 -~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~g-G~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C 164 (397)
+.+.++.|++|+ +|+|+||||+. +++.+++++||+ +|+| ||||+||++|||++.|++.+++|+| +|+||.|
T Consensus 178 ~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~-~n~Gq~C 251 (464)
T 3k9d_A 178 PTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKT-FDNGTIC 251 (464)
T ss_dssp CCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHT-GGGGCST
T ss_pred CCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHh-cCCCCCC
Confidence 688999999997 99999999998 456677889999 7888 9999999999999999999999999 9999999
Q ss_pred ccCCEEEEeCCchHHHHHHHHHHH-------HhhcCCCCC-C-CCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC
Q 015976 165 ISPDHIITTKDYAPKLLESLKNEL-------ENFYGKNPL-E-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD 234 (397)
Q Consensus 165 ~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~g~p~-~-~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~ 234 (397)
+++++||||+++||+|+++|+++. +++++|+|. + ++++||+++.++++++.++++.+. +|+++++||..
T Consensus 252 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~- 330 (464)
T 3k9d_A 252 ASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET- 330 (464)
T ss_dssp TSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-
T ss_pred CCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-
Confidence 999999999999999999999885 456677775 4 789999999999999999999887 78999999863
Q ss_pred CCCccccceEEecCCCCCcccccccccCccceEeeCCHHHHH----HHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeE
Q 015976 235 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 310 (397)
Q Consensus 235 ~~~~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v 310 (397)
++++++++. ||+||||++|++|+|++||| +++|+++|||+++|||+|.++++++++++++|+|
T Consensus 331 ------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v 397 (464)
T 3k9d_A 331 ------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRL 397 (464)
T ss_dssp ------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEE
T ss_pred ------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEE
Confidence 467788865 89999999999999999997 7999999999999999999999999999999999
Q ss_pred EEcCcccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEc
Q 015976 311 VINDTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 355 (397)
Q Consensus 311 ~IN~~~~~-------~~~~~~pfgG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 355 (397)
+||++..+ ...+.+|||| +.+|.|+++|..++++|++.|+|...
T Consensus 398 ~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 398 LVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99998753 2568999998 78999999999999999999999764
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-66 Score=522.95 Aligned_cols=306 Identities=22% Similarity=0.225 Sum_probs=257.7
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhhc----CCCCcEEEeCCh
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAV 89 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~al----P~g~v~~v~g~~ 89 (397)
+...+++++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|.++.++++++++++ |+|++|+|+|+.
T Consensus 131 ~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~ 208 (463)
T 2h5g_A 131 NLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTRE 208 (463)
T ss_dssp TEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTC
T ss_pred CceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCH
Confidence 445689999999999999777 77666 899999999999999999999999999999999986 599999999966
Q ss_pred HhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccccCC
Q 015976 90 AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 168 (397)
Q Consensus 90 ~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~ 168 (397)
+.++.|+.|+ +|+|.||||+.+|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++| .| ||.|++++
T Consensus 209 ~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~ 284 (463)
T 2h5g_A 209 EVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALE 284 (463)
T ss_dssp CC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEE
T ss_pred HHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCc
Confidence 7889999997 999999999999999999887 8999999999999999999999999999999999 98 99999999
Q ss_pred EEEEeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccCCCCccccceEEec
Q 015976 169 HIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLD 247 (397)
Q Consensus 169 ~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~~~~~~~~Ptil~~ 247 (397)
|||||++++| ||+ ++ ++++++. +|++++.|+.....++|+
T Consensus 285 rvlV~~~i~d------------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~~~~g~~~------- 325 (463)
T 2h5g_A 285 TLLIHRDLLR------------------------TPL-----FD---QIIDMLRVEQVKIHAGPKFASYLTFS------- 325 (463)
T ss_dssp EEEEEGGGTT------------------------SHH-----HH---HHHHHHHHTTCEEEECHHHHC------------
T ss_pred EEEEeccccc------------------------hHH-----HH---HHHHHHHhCCCEEEeCCcccccCccC-------
Confidence 9999999998 132 22 3455555 678888554432234442
Q ss_pred CCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCCcc
Q 015976 248 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 327 (397)
Q Consensus 248 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~pfg 327 (397)
+++|++++||+||||++|++|+|+||||+++|++++||+++|||+|.++++++++++++|+|+||++.. ..+.+|||
T Consensus 326 -~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfG 402 (463)
T 2h5g_A 326 -PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFG 402 (463)
T ss_dssp -----CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTT
T ss_pred -CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCC
Confidence 678999999999999999999999999999999999999999999999999999999999999999764 35789999
Q ss_pred cCCCCCCC--Cc--chHHHHHHhhhccEEEEcCccCCCCCcCCCCchhH
Q 015976 328 GVQESGMG--AY--HGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGK 372 (397)
Q Consensus 328 G~~~SG~G--~~--~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~~~ 372 (397)
|+|.||+| ++ +|.+++++|++.|+|..+.. +.+ |||+..+
T Consensus 403 G~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~~y~~~~ 446 (463)
T 2h5g_A 403 LGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-SDFSEHG 446 (463)
T ss_dssp SSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-GGGSTTS
T ss_pred CCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-CCccccc
Confidence 99999999 65 99999999999999988753 344 6776443
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.5e-65 Score=513.52 Aligned_cols=298 Identities=21% Similarity=0.259 Sum_probs=255.9
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHH----Hhh-cCCCCcEEEeC-
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV----GEY-MDLSSIRVVEG- 87 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~----~~a-lP~g~v~~v~g- 87 (397)
+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++.++++++ .++ +|+|++|+|+|
T Consensus 128 ~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~ 205 (444)
T 4ghk_A 128 GIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETA 205 (444)
T ss_dssp SCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCC
T ss_pred CccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCC
Confidence 456789999999999999998 8 688999999999999999999999999999999997 566 99999999998
Q ss_pred ChH-hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccc
Q 015976 88 AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 165 (397)
Q Consensus 88 ~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~ 165 (397)
+.+ .++.|..|+ +|+|.||||+.+|+.+++.+ +||+++|+|||||+||++|||++.|++.+++++| .|+| .|+
T Consensus 206 ~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~G-~C~ 280 (444)
T 4ghk_A 206 DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKT-HRYG-TCN 280 (444)
T ss_dssp CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTTCCHHHHHHHCC-----------CC
T ss_pred CHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhc-CCCc-ccC
Confidence 554 566666776 99999999999999998765 6999999999999999999999999999999999 9999 999
Q ss_pred cCCEEEEeCCchHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCccccc
Q 015976 166 SPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 242 (397)
Q Consensus 166 a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~~~~P 242 (397)
+++|||||++++|+|+++|+++++++++ |+|. ..++++++.. |
T Consensus 281 a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~~i~~a~~-------------G----- 326 (444)
T 4ghk_A 281 TMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARAVLEAAGV-------------G----- 326 (444)
T ss_dssp CCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHHHHHHTTC-------------C-----
T ss_pred cCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHHHHHhccc-------------C-----
Confidence 9999999999999999999999999877 5431 2455665421 1
Q ss_pred eEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCC
Q 015976 243 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 322 (397)
Q Consensus 243 til~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~ 322 (397)
++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+
T Consensus 327 -~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~ 401 (444)
T 4ghk_A 327 -PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRF--AD 401 (444)
T ss_dssp -CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGG--CS
T ss_pred -cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCcc--CC
Confidence 11 35678999999999999999999999999999999999999999999999999999999999999997653 57
Q ss_pred CCCcccCCCCCCC----CcchHHHHHHhhhccEEEEcCc
Q 015976 323 SLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 323 ~~pfgG~~~SG~G----~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
..||||.++||+| +++|++++++||+.|+|++...
T Consensus 402 ~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 402 GFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp TTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred CCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 8999999999998 6889999999999999988754
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=2.7e-64 Score=503.69 Aligned_cols=296 Identities=19% Similarity=0.260 Sum_probs=262.9
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHH----hh-cCCCCcEEEeC-
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG- 87 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~----~a-lP~g~v~~v~g- 87 (397)
+...+++|+|+|||++|+||| +.+.++++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|
T Consensus 116 ~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~ 193 (427)
T 1o20_A 116 GLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT 193 (427)
T ss_dssp SCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCC
T ss_pred CceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCC
Confidence 345688999999999999986 47889999999999999999999999999999999997 45 89999999998
Q ss_pred ChH-hHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCccc
Q 015976 88 AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 165 (397)
Q Consensus 88 ~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~ 165 (397)
+.+ .++.|..|+ +|+|.||||+++|+.|++.+ .||+++|+|||||+||++|||++.|++.+++++| .|+| .|+
T Consensus 194 ~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f-~n~G-~C~ 268 (427)
T 1o20_A 194 DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDESADLKKAVPVIINAKT-QRPG-TCN 268 (427)
T ss_dssp CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHH-SCTT-STT
T ss_pred ChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhc-cCCC-CCC
Confidence 555 566677776 99999999999999999877 5999999999999999999999999999999999 9999 999
Q ss_pred cCCEEEEeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCccccceEE
Q 015976 166 SPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL 245 (397)
Q Consensus 166 a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~~~~Ptil 245 (397)
+++|||||+++||+|+++|++++++++++ +.||... .+ |+ |||
T Consensus 269 a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------------~~gg~~~-~~-~~-Ptl- 311 (427)
T 1o20_A 269 AAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------------VRGCEKT-RE-IV-PDV- 311 (427)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------------EEECHHH-HH-HS-TTS-
T ss_pred CccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------------eecChhh-hh-hC-Ccc-
Confidence 99999999999999999999999987542 1122211 12 33 885
Q ss_pred ecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHcccCeEEEcCcccccCCCCCC
Q 015976 246 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 325 (397)
Q Consensus 246 ~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~IN~~~~~~~~~~~p 325 (397)
+++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+..|
T Consensus 312 --~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~--~~~~~p 387 (427)
T 1o20_A 312 --VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR--FTDGGQ 387 (427)
T ss_dssp --EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTT
T ss_pred --cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCc--cCCCCC
Confidence 3457899999999999999999999999999999999999999999999999999999999999999654 357899
Q ss_pred cccCCCCCCC----CcchHHHHHHhhhccEEEEcCc
Q 015976 326 FGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF 357 (397)
Q Consensus 326 fgG~~~SG~G----~~~g~~~l~~~t~~k~v~~~~~ 357 (397)
|||.|.||+| +++|++++++|++.|+|..++.
T Consensus 388 fGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 388 FGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp TTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred CCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 9999999997 4679999999999999988753
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.1e-63 Score=499.68 Aligned_cols=283 Identities=21% Similarity=0.275 Sum_probs=253.1
Q ss_pred CCcceEeeeeceEEEEEcCCchhhHHhHHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHH----hh-cCCCCcEEEeC-
Q 015976 14 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-MDLSSIRVVEG- 87 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~n~P~~~~~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~----~a-lP~g~v~~v~g- 87 (397)
+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++..+++++. ++ +|+|++|+|++
T Consensus 94 ~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~ 173 (452)
T 3my7_A 94 NLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQP 173 (452)
T ss_dssp ---CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSC
T ss_pred CCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCC
Confidence 3456899999999999999999999999999999999999999999999999998888876 56 99999999999
Q ss_pred ChHhHHHHHhCC-CCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCcEEEcCCCCHHHHHHHHHHHhhcCCCCCcccc
Q 015976 88 AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 166 (397)
Q Consensus 88 ~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a 166 (397)
+.+.++.|++|+ +|+|+||||+.++ +.+++++||+++|+|||||+||++|||++.|++.+++|+| +|+||.|++
T Consensus 174 ~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~-~~~GQ~C~a 248 (452)
T 3my7_A 174 SVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKT-FDNGVVCAS 248 (452)
T ss_dssp CHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGG-GGGGCCTTC
T ss_pred CHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHh-CCCCCccCC
Confidence 778999999997 9999999999854 4567789999999999999999999999999999999999 999999999
Q ss_pred CCEEEEeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hcCeEeeCCccC----CCCcccc
Q 015976 167 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD----KNKLRIA 241 (397)
Q Consensus 167 ~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~g~~v~~gg~~~----~~~~~~~ 241 (397)
+++||||+++||+|+++|+++ .||++++++.++++++++++. .++++ +||... ..|+|++
T Consensus 249 ~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~ 313 (452)
T 3my7_A 249 EQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVP 313 (452)
T ss_dssp EEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCC
T ss_pred CcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeC
Confidence 999999999999999999865 379999999999999998765 45665 476542 3589999
Q ss_pred ceE-------EecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCC----CCcEEEEecCCHHHHHH---HHHHccc
Q 015976 242 PTL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYLFTNNKKLKQQ---FVETVSA 307 (397)
Q Consensus 242 Pti-------l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~v~t~d~~~~~~---~~~~l~~ 307 (397)
||+ +.++++++++.+ |+||||++|++|+|++||++++|++. +||+++|||+|.+.+++ +++++++
T Consensus 314 pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~ 392 (452)
T 3my7_A 314 ADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKT 392 (452)
T ss_dssp TTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCC
T ss_pred CCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCE
Confidence 997 668889999875 89999999999999999999999975 99999999999877777 9999999
Q ss_pred CeEEEcCccc
Q 015976 308 GGLVINDTAV 317 (397)
Q Consensus 308 g~v~IN~~~~ 317 (397)
|+|+||++..
T Consensus 393 G~V~VN~~~~ 402 (452)
T 3my7_A 393 ARILINIPTT 402 (452)
T ss_dssp SEEEESCCCC
T ss_pred EEEEECCCCC
Confidence 9999999653
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=96.66 E-value=0.49 Score=45.77 Aligned_cols=259 Identities=19% Similarity=0.205 Sum_probs=141.5
Q ss_pred CCCcceEeeeeceEEEEEcCCc---hhhHHhHHHHHHHHhhCCE--EEEeCCCCchHHHHHHHHHHHhhcCCCCcEEEeC
Q 015976 13 FPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNA--LVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 87 (397)
Q Consensus 13 ~~~~~~~~~~P~Gvv~vi~p~n---~P~~~~~~~~~~ALaaGn~--VVlkps~~~~~~~~~~~~~~~~alP~g~v~~v~g 87 (397)
.|...-.++.|+--|++..|.- || ++.+...+||-.||+. |+.-|.+........++-+ +. .|+=.+..-
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA-~l---~Gv~eIy~v 193 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAA-YI---SGVDRVFRI 193 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHH-HH---HTCCEEECC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHH-Hh---cCCcEEEEc
Confidence 4566678899999999999954 76 4455667899999996 3333433211111112111 11 133344443
Q ss_pred Ch-HhHHHHH---hC--CCCeEEEECCHHHHHHHHHHHhcccCchhhccCCCCc--EEEcCCCCHHHHHHHHHHHhhcCC
Q 015976 88 AV-AETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP--VVFDSGINLKVACRRMIMGKWGCN 159 (397)
Q Consensus 88 ~~-~~~~~L~---~~--~v~~v~ftGs~~~g~~v~~~~~~~~~~~~~e~gG~~p--~iV~~daDl~~aa~~i~~~~~~~~ 159 (397)
++ ....+|. .. +||.|+=.|..-+..+=..-...-... + ..|-+= +|-++++|.+..|..++..+= ++
T Consensus 194 GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgID--m-~AGPSEilViAD~~a~p~~vAaDLlsQAE-Hd 269 (423)
T 4gic_A 194 GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGID--M-VAGPSEILVISDGRTDPDWIAMDLFSQAE-HD 269 (423)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEEC--C-CCCCCEEEEEECSCSCHHHHHHHHHHHHT-TC
T ss_pred CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCcc--c-ccccceEEEEeCCCCCHHHHHHHHHHhhc-cC
Confidence 44 4445554 12 399998777665432211111111111 1 123333 344456899999988888765 43
Q ss_pred CCCccccCCEEEEeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCcc
Q 015976 160 NGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR 239 (397)
Q Consensus 160 ~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~~ 239 (397)
.. .+.++|..+ ++|.++..++++++... +...+ .+.+-++
T Consensus 270 ~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~----------l~r~~---i~~~sl~-------------------- 309 (423)
T 4gic_A 270 ED-----AQAILISPD--AAHLEAVQASIERLLPG----------MERAE---VIRTSLE-------------------- 309 (423)
T ss_dssp TT-----CEEEEEESC--HHHHHHHHHHHHHHGGG----------CTTHH---HHHHHHH--------------------
T ss_pred CC-----CeEEEEeCc--HHHHHHHHHHHHHHHhh----------CccHH---HHHHHHh--------------------
Confidence 32 245566655 56667766666654211 11111 1111111
Q ss_pred ccceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHc-ccCeEEEcCcccc
Q 015976 240 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVH 318 (397)
Q Consensus 240 ~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~IN~~~~~ 318 (397)
-+| .++.++|++|+++++|..-- =..-|.++|.. .+..++ .+|.|++..++.-
T Consensus 310 -------------------~~g---~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaIFlG~~tp~ 363 (423)
T 4gic_A 310 -------------------RRG---GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVESIRNAGAIFMGRYTAE 363 (423)
T ss_dssp -------------------HHC---EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGGGCCCCSEEEEC-----
T ss_pred -------------------cCc---eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHhhCcEeceeecCCCCch
Confidence 111 35667999999999998433 25678888875 456666 5899999874321
Q ss_pred c-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 015976 319 L-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 351 (397)
Q Consensus 319 ~-------~~~~~pfgG~~~SG~G~~~g~~~l~~~t~~k~ 351 (397)
. .++.+|-+| ..|+.+.-+...|..+-+
T Consensus 364 ~~GDY~aG~NHvLPT~G-----~Ar~~sgLsv~~F~K~~s 398 (423)
T 4gic_A 364 ALGDYCAGPNHVLPTSG-----TARFSSPLGVYDFQKRSS 398 (423)
T ss_dssp -----------CCCCTT-----GGGTCCCCCGGGGEEEEE
T ss_pred hhhhcCcCCCccCCCCC-----cccccCCCCHHHeeeeee
Confidence 1 345556554 456666667777754433
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.36 E-value=0.82 Score=44.31 Aligned_cols=255 Identities=18% Similarity=0.184 Sum_probs=146.3
Q ss_pred CCcceEeeeeceEEEEEcCC---chhhHHhHHHHHHHHhhCCEEEEeCCC--CchHHHHHHHHHHHhhcCCCCcEEEeCC
Q 015976 14 PSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNALVLKPSE--VAPASSSLLAKLVGEYMDLSSIRVVEGA 88 (397)
Q Consensus 14 ~~~~~~~~~P~Gvv~vi~p~---n~P~~~~~~~~~~ALaaGn~VVlkps~--~~~~~~~~~~~~~~~alP~g~v~~v~g~ 88 (397)
|...-.++.|+--|++..|. -|| ++.+...+||-.+|+.=|+--+| -.|.+ ...+++ .|+=.+..-+
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i-L~AA~l------~Gv~eIy~vG 185 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADEI-LYAAQL------CGVQDVFNVG 185 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHHH-HHHHHH------TTCCEEEECC
T ss_pred CcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHHH-HHHHHH------cCCCEEeecc
Confidence 55666889999999999997 466 45556678999999875554433 23322 111111 1433444434
Q ss_pred h-HhHHHHH---hC-C-CCeEEEECCHHHH--HHHHHHHhcccCchhhccCCCCc--EEEcCCCCHHHHHHHHHHHhhcC
Q 015976 89 V-AETSALL---DQ-K-WDKICYTGNSRVA--RIVMAAAAKHLTPVLLELGGKSP--VVFDSGINLKVACRRMIMGKWGC 158 (397)
Q Consensus 89 ~-~~~~~L~---~~-~-v~~v~ftGs~~~g--~~v~~~~~~~~~~~~~e~gG~~p--~iV~~daDl~~aa~~i~~~~~~~ 158 (397)
+ ....+|. +. + +|+|+=.|..-+. +++.+..... . -+=-..|-+= +|-+++||.+..+..++.-+= +
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~-V-gIDm~AGPSEilViAD~tAnp~~vAaDLLsQAE-H 262 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDG-A-AIDMPAGPSEVLVIADSGATPDFVASDLLSQAE-H 262 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTS-C-EESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT-T
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCc-c-ccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc-c
Confidence 3 4445554 22 3 9999877665432 2222110111 0 0111223333 344567899999988888765 4
Q ss_pred CCCCccccCCEEEEeCCchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHhhhcCeEeeCCccCCCCc
Q 015976 159 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKL 238 (397)
Q Consensus 159 ~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~g~~v~~gg~~~~~~~ 238 (397)
+. ..+.|+|..+ +++.++..+++++....-| .. +.++.+
T Consensus 263 d~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp----------r~-------~ia~~s----------------- 301 (434)
T 1kae_A 263 GP-----DSQVILLTPA--ADMARRVAEAVERQLAELP----------RA-------ETARQA----------------- 301 (434)
T ss_dssp CT-----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT----------TH-------HHHHHH-----------------
T ss_pred CC-----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC----------hH-------HHHHHH-----------------
Confidence 33 2345666655 5666666666654321111 11 111111
Q ss_pred cccceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHHc-ccCeEEEcCccc
Q 015976 239 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAV 317 (397)
Q Consensus 239 ~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~IN~~~~ 317 (397)
+..- .++.++|++|+++++|..--= ..-|.++|.. .++.++ .+|.|++..++.
T Consensus 302 ---------------------l~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~tp 355 (434)
T 1kae_A 302 ---------------------LNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWSP 355 (434)
T ss_dssp ---------------------HTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTCC
T ss_pred ---------------------HHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCCc
Confidence 1112 477789999999999984332 5678898875 455565 789999997432
Q ss_pred -------ccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 015976 318 -------HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 351 (397)
Q Consensus 318 -------~~~~~~~pfgG~~~SG~G~~~g~~~l~~~t~~k~ 351 (397)
...|+.+|-+| ..|+.+.-+.+.|..+-+
T Consensus 356 e~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s 391 (434)
T 1kae_A 356 ESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMT 391 (434)
T ss_dssp HHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEE
T ss_pred hhhcccccCCCcccCCCC-----ceeccCCCcHHhccceee
Confidence 22567777766 456666667777854433
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=51.67 E-value=62 Score=24.21 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHhh--hcCeEeeCCccCCCCccccceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcC
Q 015976 207 NSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 282 (397)
Q Consensus 207 ~~~~~~~~~~~i~~a~--~g~~v~~gg~~~~~~~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 282 (397)
+++.+++..+...... .|++++..|.. |.++.+.. .+-+.|+.|.|.++|.++.|+-
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~--------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~ 74 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS--------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSP 74 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC--------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC--------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCH
Confidence 4444444444444333 57888776542 44554321 1367799999999999998853
No 56
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=49.25 E-value=28 Score=30.67 Aligned_cols=64 Identities=6% Similarity=0.086 Sum_probs=42.7
Q ss_pred HHHHHHHHhhCCEEEEeCCCCchHHHHHHHHHHHhhcCCCCcEEEeCChHhHHHHHhCCCCeEEEECCH
Q 015976 41 LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNS 109 (397)
Q Consensus 41 ~~~~~~ALaaGn~VVlkps~~~~~~~~~~~~~~~~alP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~ 109 (397)
+..++..+..||-||++-++ +.....+..++...+|.++++++..+.+- ......+.+.++.+.
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~Y---~~~~~cnilgls~~v 84 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQY---EEAYRCNFLGLSPHV 84 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESSC---CCTTTCSEEEECTTC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchhh---cchhheeeecCCCCc
Confidence 35567788899999999875 33444566778888999999998653221 111135566655543
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=24.78 E-value=2.1e+02 Score=20.97 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHhh--hcCeEeeCCccCCCCccccceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhcC
Q 015976 207 NSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 282 (397)
Q Consensus 207 ~~~~~~~~~~~i~~a~--~g~~v~~gg~~~~~~~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 282 (397)
+++.+++..+...... .|++++..| . +.++++.. . ...+.|+.|.|.+.|.++.|+-
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~--------~~~lEG~~---------~-~~~~viieFps~~aa~a~y~Sp 73 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S--------VEQLHGKF---------E-HKAQVILEFPSREDAYNWYHSE 73 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E--------CEEEESCC---------C-CSEEEEEEESSHHHHHHHHHSH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c--------cccccCCC---------C-CCeEEEEECCCHHHHHHHHCCH
Confidence 4444444444444443 478888766 4 23444321 1 2467899999999999998864
No 58
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=22.77 E-value=2e+02 Score=22.38 Aligned_cols=27 Identities=11% Similarity=0.263 Sum_probs=21.4
Q ss_pred cccccCccceEeeCCHHHHHHHHhcCCC
Q 015976 257 EEIFGPLLPILTVDKIEDSFDIINSGTK 284 (397)
Q Consensus 257 eE~fgPvl~v~~~~~~~eai~~~n~~~~ 284 (397)
.|..|= +.|+.++|.|||++++...+.
T Consensus 81 kE~lgG-~~iie~~s~deA~e~A~~~P~ 107 (124)
T 1s7i_A 81 KEQLGG-FYLIEARDLNQALQIAAKIPP 107 (124)
T ss_dssp SSEEEE-EEEEEESSHHHHHHHHTTCGG
T ss_pred ccccee-EEEEEeCCHHHHHHHHHhCCc
Confidence 455553 568899999999999988765
No 59
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=22.63 E-value=2.3e+02 Score=22.67 Aligned_cols=61 Identities=13% Similarity=0.201 Sum_probs=39.2
Q ss_pred cCCHHHHHHHHHHHHHhh--hcCeEeeCCccCCCCccccceEEecCCCCCcccccccccCccceEeeCCHHHHHHHHhc
Q 015976 205 IVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 281 (397)
Q Consensus 205 l~~~~~~~~~~~~i~~a~--~g~~v~~gg~~~~~~~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~ 281 (397)
+.+++.+++..+....+. .|++++..|.. +.++.+... |.+ .-+.|+.|.|.+.+.++.++
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~--------~~~lEG~~~-------e~~-~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF--------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE--------EEEEESCTT-------CCC-SEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC--------ceeEECCCC-------CCC-CeEEEEECCCHHHHHHHHcC
Confidence 456666666666665554 57888776653 234443211 112 45789999999999999874
Done!