Query 015981
Match_columns 397
No_of_seqs 166 out of 1188
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 05:52:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ash_A Queuine tRNA-ribosyltra 100.0 6E-108 2E-112 809.8 33.7 361 1-388 13-376 (381)
2 3bld_A Queuine tRNA-ribosyltra 100.0 4E-108 1E-112 814.8 30.3 361 1-388 14-383 (386)
3 1iq8_A Archaeosine tRNA-guanin 100.0 3E-87 1E-91 699.9 23.3 329 1-386 8-339 (582)
4 2ftp_A Hydroxymethylglutaryl-C 95.0 0.045 1.5E-06 52.3 7.4 78 190-268 155-236 (302)
5 3ble_A Citramalate synthase fr 93.5 0.12 4E-06 50.1 6.7 86 191-277 166-255 (337)
6 3ewb_X 2-isopropylmalate synth 93.4 0.23 7.8E-06 47.2 8.4 81 189-269 145-231 (293)
7 1ydo_A HMG-COA lyase; TIM-barr 93.3 0.13 4.5E-06 49.2 6.7 128 132-268 87-234 (307)
8 2cw6_A Hydroxymethylglutaryl-C 93.0 0.29 1E-05 46.4 8.6 79 189-268 151-233 (298)
9 1rqb_A Transcarboxylase 5S sub 92.4 2 6.9E-05 44.1 14.3 126 128-268 119-253 (539)
10 1nvm_A HOA, 4-hydroxy-2-oxoval 92.3 1.9 6.6E-05 41.6 13.6 136 129-278 96-237 (345)
11 3zwt_A Dihydroorotate dehydrog 92.3 1.9 6.6E-05 42.1 13.5 142 127-269 162-329 (367)
12 1ydn_A Hydroxymethylglutaryl-C 92.0 0.29 1E-05 46.2 7.2 76 191-267 152-231 (295)
13 2nx9_A Oxaloacetate decarboxyl 91.6 3.2 0.00011 41.8 14.6 124 129-269 103-235 (464)
14 1jub_A Dihydroorotate dehydrog 91.2 1.6 5.4E-05 41.2 11.4 88 182-269 160-273 (311)
15 1f76_A Dihydroorotate dehydrog 91.0 3.4 0.00012 39.4 13.7 142 127-269 151-320 (336)
16 3oix_A Putative dihydroorotate 90.7 2 6.7E-05 41.7 11.6 139 126-269 138-306 (345)
17 3rmj_A 2-isopropylmalate synth 90.4 0.81 2.8E-05 44.8 8.7 95 183-277 145-246 (370)
18 3eeg_A 2-isopropylmalate synth 89.5 0.26 8.8E-06 47.5 4.2 87 183-269 139-232 (325)
19 3bg3_A Pyruvate carboxylase, m 88.7 7.8 0.00027 41.2 15.2 87 191-278 258-348 (718)
20 3s5o_A 4-hydroxy-2-oxoglutarat 88.5 1.2 4.1E-05 42.4 8.0 80 189-270 30-119 (307)
21 3i65_A Dihydroorotate dehydrog 88.3 5.5 0.00019 39.5 12.9 140 128-268 198-375 (415)
22 1xky_A Dihydrodipicolinate syn 88.3 1.2 3.9E-05 42.3 7.8 80 189-270 28-117 (301)
23 3tak_A DHDPS, dihydrodipicolin 87.7 1.1 3.6E-05 42.4 7.1 80 189-270 17-106 (291)
24 3cpr_A Dihydrodipicolinate syn 87.7 1.2 4.1E-05 42.3 7.5 80 189-270 32-121 (304)
25 2nuw_A 2-keto-3-deoxygluconate 87.4 1.7 5.8E-05 40.9 8.3 77 189-270 15-101 (288)
26 3b4u_A Dihydrodipicolinate syn 87.4 1.5 5E-05 41.4 7.9 80 189-270 19-108 (294)
27 2wkj_A N-acetylneuraminate lya 87.2 1.2 4.2E-05 42.2 7.3 80 189-270 27-116 (303)
28 3flu_A DHDPS, dihydrodipicolin 87.1 1.6 5.4E-05 41.3 7.9 80 189-270 23-112 (297)
29 3l21_A DHDPS, dihydrodipicolin 87.1 1.2 4.3E-05 42.2 7.2 80 189-270 31-120 (304)
30 3si9_A DHDPS, dihydrodipicolin 86.8 1.5 5E-05 42.0 7.6 80 189-270 38-127 (315)
31 3a5f_A Dihydrodipicolinate syn 86.5 1.4 4.7E-05 41.6 7.1 79 189-270 18-106 (291)
32 3fkr_A L-2-keto-3-deoxyarabona 86.3 1.3 4.6E-05 42.1 7.0 81 188-270 23-113 (309)
33 2ehh_A DHDPS, dihydrodipicolin 86.3 1.3 4.5E-05 41.8 6.9 81 188-270 15-105 (294)
34 1w3i_A EDA, 2-keto-3-deoxy glu 85.9 1.9 6.6E-05 40.6 7.8 77 189-270 15-101 (293)
35 3dz1_A Dihydrodipicolinate syn 85.8 1.9 6.4E-05 41.1 7.7 78 189-269 24-111 (313)
36 1f6k_A N-acetylneuraminate lya 85.7 1.5 5E-05 41.4 6.8 80 189-270 19-109 (293)
37 2r91_A 2-keto-3-deoxy-(6-phosp 85.6 1.8 6.3E-05 40.6 7.5 78 188-270 13-100 (286)
38 2yxg_A DHDPS, dihydrodipicolin 85.5 1.4 4.7E-05 41.5 6.5 81 188-270 15-105 (289)
39 3qze_A DHDPS, dihydrodipicolin 85.4 1.5 5.2E-05 41.8 6.9 80 189-270 39-128 (314)
40 4dpp_A DHDPS 2, dihydrodipicol 85.3 1.9 6.6E-05 42.0 7.6 79 189-269 75-163 (360)
41 3m5v_A DHDPS, dihydrodipicolin 85.2 1.4 4.7E-05 41.8 6.4 81 188-270 22-113 (301)
42 2r8w_A AGR_C_1641P; APC7498, d 85.1 1.4 4.7E-05 42.5 6.5 80 189-270 50-139 (332)
43 3na8_A Putative dihydrodipicol 85.1 1.7 5.8E-05 41.5 7.0 80 189-270 40-129 (315)
44 2v9d_A YAGE; dihydrodipicolini 85.0 1.8 6.2E-05 41.8 7.3 80 189-270 47-136 (343)
45 2rfg_A Dihydrodipicolinate syn 84.8 1.3 4.5E-05 41.9 6.1 81 188-270 15-105 (297)
46 1p0k_A Isopentenyl-diphosphate 84.7 10 0.00035 36.2 12.6 135 126-270 127-283 (349)
47 2vc6_A MOSA, dihydrodipicolina 84.6 1.3 4.3E-05 41.8 5.9 81 188-270 15-105 (292)
48 4ef8_A Dihydroorotate dehydrog 84.3 7.2 0.00025 37.8 11.2 134 127-268 137-307 (354)
49 1o5k_A DHDPS, dihydrodipicolin 84.2 1.5 5.1E-05 41.7 6.2 81 188-270 27-117 (306)
50 2ojp_A DHDPS, dihydrodipicolin 84.2 1.5 5E-05 41.4 6.1 80 189-270 17-106 (292)
51 2ztj_A Homocitrate synthase; ( 83.5 3.1 0.00011 40.7 8.3 145 128-278 77-232 (382)
52 3qfe_A Putative dihydrodipicol 81.9 2.4 8.4E-05 40.4 6.7 79 189-269 27-115 (318)
53 2e6f_A Dihydroorotate dehydrog 81.6 5.2 0.00018 37.6 8.9 136 126-269 103-275 (314)
54 1tv5_A Dhodehase, dihydroorota 81.3 30 0.001 34.4 14.7 87 183-269 300-404 (443)
55 3tha_A Tryptophan synthase alp 80.4 8.3 0.00028 35.5 9.5 40 225-267 187-227 (252)
56 3h5d_A DHDPS, dihydrodipicolin 80.3 3.7 0.00013 39.0 7.3 79 189-269 23-112 (311)
57 3e96_A Dihydrodipicolinate syn 80.1 1.7 5.9E-05 41.4 4.9 81 188-270 27-116 (316)
58 3eb2_A Putative dihydrodipicol 78.6 1.4 4.8E-05 41.7 3.8 80 189-270 20-109 (300)
59 3daq_A DHDPS, dihydrodipicolin 78.5 3.9 0.00013 38.4 6.8 79 190-270 19-107 (292)
60 3vnd_A TSA, tryptophan synthas 78.1 21 0.00072 33.0 11.6 120 126-267 110-235 (267)
61 2ekc_A AQ_1548, tryptophan syn 78.1 7.1 0.00024 35.9 8.4 80 182-263 18-125 (262)
62 3ivs_A Homocitrate synthase, m 78.0 11 0.00039 37.3 10.2 85 191-277 177-265 (423)
63 3nav_A Tryptophan synthase alp 74.5 44 0.0015 30.9 12.7 121 126-267 112-237 (271)
64 3r2g_A Inosine 5'-monophosphat 74.2 46 0.0016 32.1 13.3 117 130-269 103-230 (361)
65 3m47_A Orotidine 5'-phosphate 73.5 17 0.00059 32.7 9.5 120 127-270 79-205 (228)
66 3hbl_A Pyruvate carboxylase; T 72.4 35 0.0012 38.3 13.4 78 191-270 689-770 (1150)
67 3qja_A IGPS, indole-3-glycerol 70.9 31 0.0011 31.9 10.9 119 126-268 123-243 (272)
68 2pcq_A Putative dihydrodipicol 69.2 5.7 0.00019 37.1 5.3 83 189-278 14-109 (283)
69 3d0c_A Dihydrodipicolinate syn 68.8 7.5 0.00026 36.9 6.2 81 188-270 27-116 (314)
70 2nzl_A Hydroxyacid oxidase 1; 67.9 11 0.00038 36.9 7.3 75 199-273 265-342 (392)
71 2nli_A Lactate oxidase; flavoe 67.5 13 0.00045 36.0 7.8 75 199-273 242-319 (368)
72 2qf7_A Pyruvate carboxylase pr 67.2 10 0.00035 42.6 7.7 78 191-270 706-787 (1165)
73 1qop_A Tryptophan synthase alp 66.7 16 0.00056 33.5 7.9 80 181-262 17-124 (268)
74 1ep3_A Dihydroorotate dehydrog 66.6 18 0.0006 33.6 8.3 83 183-267 100-196 (311)
75 2hmc_A AGR_L_411P, dihydrodipi 65.8 8.5 0.00029 37.1 5.9 76 189-269 42-127 (344)
76 1gte_A Dihydropyrimidine dehyd 65.7 50 0.0017 36.4 12.8 133 127-268 646-817 (1025)
77 1ep3_A Dihydroorotate dehydrog 65.6 14 0.00049 34.3 7.4 67 199-267 181-270 (311)
78 2wqp_A Polysialic acid capsule 64.9 20 0.00069 34.6 8.3 122 129-265 38-179 (349)
79 3dxi_A Putative aldolase; TIM 64.8 11 0.00037 36.0 6.4 63 205-269 154-220 (320)
80 3inp_A D-ribulose-phosphate 3- 63.5 7.5 0.00026 35.7 4.8 121 126-268 96-224 (246)
81 3sr7_A Isopentenyl-diphosphate 63.2 18 0.0006 35.2 7.7 132 127-273 156-313 (365)
82 4e38_A Keto-hydroxyglutarate-a 61.7 10 0.00036 34.4 5.4 60 198-270 97-156 (232)
83 1mzh_A Deoxyribose-phosphate a 60.7 60 0.0021 28.8 10.3 77 188-268 126-205 (225)
84 1jub_A Dihydroorotate dehydrog 60.7 35 0.0012 31.7 9.2 82 183-267 96-192 (311)
85 3sgz_A Hydroxyacid oxidase 2; 60.7 20 0.00067 34.7 7.4 74 199-272 230-306 (352)
86 1eep_A Inosine 5'-monophosphat 60.4 16 0.00053 35.8 6.8 64 200-266 158-221 (404)
87 2hl7_A Cytochrome C-type bioge 60.3 5.3 0.00018 30.5 2.6 46 324-387 28-73 (84)
88 1vcf_A Isopentenyl-diphosphate 60.0 18 0.00063 34.2 7.1 131 126-272 132-290 (332)
89 3g8r_A Probable spore coat pol 59.8 25 0.00086 33.9 7.9 88 163-265 73-166 (350)
90 1nvm_A HOA, 4-hydroxy-2-oxoval 59.6 20 0.00068 34.3 7.3 78 191-269 27-115 (345)
91 3vkj_A Isopentenyl-diphosphate 59.2 57 0.0019 31.5 10.5 136 126-273 135-302 (368)
92 1vli_A Spore coat polysacchari 58.6 16 0.00053 35.8 6.3 115 129-258 47-178 (385)
93 1vrd_A Inosine-5'-monophosphat 57.6 18 0.00063 36.2 7.0 66 199-267 241-306 (494)
94 1qop_A Tryptophan synthase alp 57.5 63 0.0022 29.4 10.2 119 128-267 111-234 (268)
95 1zfj_A Inosine monophosphate d 57.5 17 0.00057 36.4 6.6 65 200-267 238-302 (491)
96 3bo9_A Putative nitroalkan dio 57.2 21 0.00072 33.8 6.9 114 128-271 91-209 (326)
97 2kw0_A CCMH protein; oxidoredu 56.0 6.2 0.00021 30.5 2.3 47 323-387 24-70 (90)
98 2gjl_A Hypothetical protein PA 55.6 33 0.0011 32.3 8.1 116 128-271 85-205 (328)
99 1gox_A (S)-2-hydroxy-acid oxid 55.1 31 0.0011 33.3 7.9 73 199-272 238-314 (370)
100 2z6i_A Trans-2-enoyl-ACP reduc 54.8 27 0.00092 33.1 7.3 116 128-271 77-195 (332)
101 1y0e_A Putative N-acetylmannos 53.6 30 0.001 30.3 7.0 67 200-268 81-147 (223)
102 1rd5_A Tryptophan synthase alp 53.2 63 0.0021 29.2 9.3 82 182-265 19-123 (262)
103 1ypf_A GMP reductase; GUAC, pu 52.7 34 0.0012 32.5 7.7 70 198-270 161-242 (336)
104 2e6f_A Dihydroorotate dehydrog 51.7 51 0.0017 30.6 8.6 83 182-267 95-195 (314)
105 2f6u_A GGGPS, (S)-3-O-geranylg 51.1 24 0.00083 32.0 5.9 59 197-265 23-82 (234)
106 3bw2_A 2-nitropropane dioxygen 49.3 35 0.0012 32.7 7.2 116 128-270 111-240 (369)
107 1gte_A Dihydropyrimidine dehyd 48.6 1.1E+02 0.0039 33.5 12.0 84 182-267 636-735 (1025)
108 3tjx_A Dihydroorotate dehydrog 48.4 1.5E+02 0.0051 28.0 11.5 41 226-267 265-306 (354)
109 3tsm_A IGPS, indole-3-glycerol 48.2 73 0.0025 29.4 8.9 122 119-266 69-195 (272)
110 1h1y_A D-ribulose-5-phosphate 47.7 96 0.0033 27.3 9.5 122 127-269 75-203 (228)
111 1z41_A YQJM, probable NADH-dep 47.4 51 0.0017 31.2 7.9 81 187-269 222-309 (338)
112 3usb_A Inosine-5'-monophosphat 47.2 58 0.002 32.9 8.7 129 126-266 193-324 (511)
113 3ctl_A D-allulose-6-phosphate 46.4 29 0.001 31.2 5.7 120 126-267 67-195 (231)
114 3khj_A Inosine-5-monophosphate 44.7 75 0.0025 30.6 8.7 66 197-266 107-172 (361)
115 2c6q_A GMP reductase 2; TIM ba 44.4 47 0.0016 31.8 7.2 79 184-267 109-189 (351)
116 3tsm_A IGPS, indole-3-glycerol 44.3 27 0.00093 32.4 5.3 117 126-268 130-250 (272)
117 1kbi_A Cytochrome B2, L-LCR; f 44.1 37 0.0013 34.4 6.7 74 199-273 356-438 (511)
118 1thf_D HISF protein; thermophI 43.7 49 0.0017 29.5 6.9 67 200-268 157-225 (253)
119 1pii_A N-(5'phosphoribosyl)ant 43.5 1E+02 0.0034 30.7 9.6 118 125-267 163-282 (452)
120 3vzx_A Heptaprenylglyceryl pho 43.4 26 0.00089 31.7 4.8 56 199-263 23-78 (228)
121 1yxy_A Putative N-acetylmannos 43.2 56 0.0019 28.8 7.1 65 199-265 93-158 (234)
122 3w01_A Heptaprenylglyceryl pho 43.2 30 0.001 31.5 5.2 59 197-264 26-84 (235)
123 1me8_A Inosine-5'-monophosphat 43.1 50 0.0017 33.2 7.5 72 197-270 295-384 (503)
124 1h5y_A HISF; histidine biosynt 42.4 1E+02 0.0036 26.8 8.9 68 198-267 37-106 (253)
125 1eep_A Inosine 5'-monophosphat 41.9 62 0.0021 31.4 7.7 70 199-270 207-288 (404)
126 1jcn_A Inosine monophosphate d 41.8 62 0.0021 32.5 7.9 68 199-269 309-389 (514)
127 1p4c_A L(+)-mandelate dehydrog 41.5 24 0.00083 34.3 4.6 71 199-271 238-311 (380)
128 3b0p_A TRNA-dihydrouridine syn 41.3 93 0.0032 29.6 8.8 82 183-267 60-164 (350)
129 1geq_A Tryptophan synthase alp 40.9 1.9E+02 0.0064 25.4 12.3 116 129-267 98-220 (248)
130 2yxb_A Coenzyme B12-dependent 40.9 87 0.003 26.2 7.6 64 201-265 63-127 (161)
131 1geq_A Tryptophan synthase alp 40.5 46 0.0016 29.6 6.1 83 182-267 6-115 (248)
132 3r2g_A Inosine 5'-monophosphat 40.2 50 0.0017 31.9 6.6 66 198-267 103-169 (361)
133 3ru6_A Orotidine 5'-phosphate 39.6 1.6E+02 0.0054 27.6 9.8 121 127-271 91-234 (303)
134 1jcn_A Inosine monophosphate d 39.5 46 0.0016 33.5 6.5 66 199-267 259-324 (514)
135 1viz_A PCRB protein homolog; s 39.4 40 0.0014 30.6 5.5 59 197-265 23-82 (240)
136 3o63_A Probable thiamine-phosp 39.1 50 0.0017 29.9 6.1 63 204-267 152-219 (243)
137 3qja_A IGPS, indole-3-glycerol 38.3 58 0.002 30.0 6.5 122 121-267 65-189 (272)
138 3f4w_A Putative hexulose 6 pho 38.3 1.9E+02 0.0064 24.7 10.2 116 129-268 67-188 (211)
139 4ef8_A Dihydroorotate dehydrog 38.3 1.4E+02 0.0047 28.6 9.4 82 182-267 128-228 (354)
140 1h5y_A HISF; histidine biosynt 38.2 50 0.0017 29.0 6.0 67 200-268 160-228 (253)
141 1ka9_F Imidazole glycerol phos 36.8 86 0.0029 27.7 7.4 67 199-267 36-104 (252)
142 3hgj_A Chromate reductase; TIM 36.7 91 0.0031 29.6 7.9 80 188-269 233-320 (349)
143 1wa3_A 2-keto-3-deoxy-6-phosph 36.0 92 0.0032 26.6 7.2 77 182-264 11-87 (205)
144 1ujp_A Tryptophan synthase alp 36.0 1.7E+02 0.0057 26.8 9.3 118 127-267 107-229 (271)
145 3t7v_A Methylornithine synthas 35.8 34 0.0012 32.3 4.6 78 190-270 213-303 (350)
146 4fo4_A Inosine 5'-monophosphat 35.6 64 0.0022 31.2 6.6 64 200-266 113-176 (366)
147 3ovp_A Ribulose-phosphate 3-ep 35.4 1.2E+02 0.004 27.0 8.0 121 126-269 74-199 (228)
148 1ypf_A GMP reductase; GUAC, pu 34.9 94 0.0032 29.3 7.6 72 191-267 103-177 (336)
149 2p06_A Hypothetical protein AF 34.4 57 0.002 24.6 4.6 28 357-384 63-90 (114)
150 1p0k_A Isopentenyl-diphosphate 34.3 1.4E+02 0.0049 28.0 8.8 82 181-267 117-209 (349)
151 2ekc_A AQ_1548, tryptophan syn 34.2 2.6E+02 0.0089 25.1 12.1 119 127-267 110-234 (262)
152 1ka9_F Imidazole glycerol phos 34.2 63 0.0021 28.7 6.0 66 200-267 158-225 (252)
153 4avf_A Inosine-5'-monophosphat 34.1 78 0.0027 31.7 7.2 67 199-267 283-361 (490)
154 1yad_A Regulatory protein TENI 33.7 94 0.0032 27.0 7.0 66 201-269 124-194 (221)
155 3usb_A Inosine-5'-monophosphat 33.7 1.1E+02 0.0037 30.8 8.2 67 199-267 310-388 (511)
156 4fxs_A Inosine-5'-monophosphat 33.6 68 0.0023 32.2 6.6 64 200-266 236-299 (496)
157 3tdn_A FLR symmetric alpha-bet 33.5 88 0.003 27.8 6.9 68 198-267 39-108 (247)
158 3cu2_A Ribulose-5-phosphate 3- 33.4 47 0.0016 30.0 4.9 126 127-268 80-218 (237)
159 3q58_A N-acetylmannosamine-6-p 32.9 79 0.0027 28.2 6.3 61 200-265 94-154 (229)
160 1vrd_A Inosine-5'-monophosphat 32.8 1.3E+02 0.0045 29.8 8.6 70 200-270 292-372 (494)
161 1tqj_A Ribulose-phosphate 3-ep 32.4 41 0.0014 30.0 4.3 123 127-269 73-203 (230)
162 3gr7_A NADPH dehydrogenase; fl 31.9 1E+02 0.0035 29.2 7.3 80 188-269 223-309 (340)
163 1wv2_A Thiazole moeity, thiazo 31.5 72 0.0025 29.4 5.8 66 199-267 148-216 (265)
164 3kru_A NADH:flavin oxidoreduct 31.4 65 0.0022 30.7 5.8 79 188-269 224-309 (343)
165 3igs_A N-acetylmannosamine-6-p 31.2 89 0.003 27.9 6.4 61 200-265 94-154 (232)
166 1y0e_A Putative N-acetylmannos 31.1 1E+02 0.0036 26.6 6.8 120 128-267 77-204 (223)
167 3hq1_A 2-isopropylmalate synth 30.5 3.4E+02 0.012 28.3 11.3 122 154-278 183-322 (644)
168 2htm_A Thiazole biosynthesis p 30.5 1.1E+02 0.0038 28.2 6.9 120 127-266 75-206 (268)
169 3hgj_A Chromate reductase; TIM 30.5 1.4E+02 0.0047 28.3 8.0 44 225-268 205-260 (349)
170 4fxs_A Inosine-5'-monophosphat 30.4 1.2E+02 0.004 30.5 7.7 69 199-267 285-363 (496)
171 4dbe_A Orotidine 5'-phosphate 30.3 58 0.002 29.0 4.9 65 199-272 127-192 (222)
172 2bdq_A Copper homeostasis prot 30.2 93 0.0032 28.0 6.2 70 197-267 136-207 (224)
173 3l5l_A Xenobiotic reductase A; 29.8 58 0.002 31.2 5.2 43 226-268 212-267 (363)
174 3vnd_A TSA, tryptophan synthas 29.7 1.4E+02 0.0047 27.4 7.5 99 181-281 18-153 (267)
175 3sr7_A Isopentenyl-diphosphate 29.6 1.3E+02 0.0045 28.9 7.7 82 181-267 145-237 (365)
176 4avf_A Inosine-5'-monophosphat 29.2 92 0.0031 31.2 6.7 64 200-266 234-297 (490)
177 3ks6_A Glycerophosphoryl diest 29.1 61 0.0021 29.1 4.9 44 227-273 195-238 (250)
178 3lab_A Putative KDPG (2-keto-3 29.1 22 0.00076 31.9 1.9 63 199-270 77-141 (217)
179 3jr2_A Hexulose-6-phosphate sy 28.9 78 0.0027 27.7 5.5 63 199-266 75-138 (218)
180 1thf_D HISF protein; thermophI 28.6 1.7E+02 0.0059 25.7 7.9 66 200-267 36-103 (253)
181 2w6r_A Imidazole glycerol phos 28.4 1.1E+02 0.0037 27.4 6.5 61 201-267 163-229 (266)
182 3ffs_A Inosine-5-monophosphate 28.4 85 0.0029 30.7 6.1 117 129-267 146-275 (400)
183 1ujp_A Tryptophan synthase alp 28.3 1.2E+02 0.004 27.9 6.8 85 182-270 17-130 (271)
184 3ve9_A Orotidine-5'-phosphate 28.2 60 0.002 28.9 4.6 69 194-272 115-185 (215)
185 3qvq_A Phosphodiesterase OLEI0 28.1 48 0.0016 29.9 4.0 44 227-273 201-244 (252)
186 1zfj_A Inosine monophosphate d 28.0 1.5E+02 0.005 29.4 8.0 70 198-269 286-367 (491)
187 1yxy_A Putative N-acetylmannos 27.4 62 0.0021 28.5 4.6 66 200-268 146-216 (234)
188 1vhc_A Putative KHG/KDPG aldol 27.3 88 0.003 27.8 5.6 55 202-269 84-138 (224)
189 3l12_A Putative glycerophospho 27.0 70 0.0024 29.7 5.1 44 227-273 259-302 (313)
190 3nur_A Amidohydrolase; TIM bar 26.0 4.2E+02 0.014 24.9 12.1 115 127-245 74-192 (357)
191 1ydn_A Hydroxymethylglutaryl-C 25.6 1.8E+02 0.0063 26.5 7.8 72 191-265 23-97 (295)
192 2c6q_A GMP reductase 2; TIM ba 25.6 1.8E+02 0.0061 27.7 7.8 70 199-269 174-254 (351)
193 3b0p_A TRNA-dihydrouridine syn 25.5 1E+02 0.0035 29.3 6.1 71 197-269 147-227 (350)
194 1vzw_A Phosphoribosyl isomeras 25.4 86 0.0029 27.7 5.2 68 199-268 151-223 (244)
195 4fo4_A Inosine 5'-monophosphat 25.4 90 0.0031 30.1 5.6 66 200-267 163-240 (366)
196 2tps_A Protein (thiamin phosph 25.3 79 0.0027 27.4 4.9 65 203-269 132-202 (227)
197 1vd6_A Glycerophosphoryl diest 25.3 59 0.002 28.6 4.0 44 227-273 177-220 (224)
198 3igs_A N-acetylmannosamine-6-p 24.9 1.2E+02 0.0042 26.9 6.2 63 202-267 144-210 (232)
199 3q58_A N-acetylmannosamine-6-p 24.9 1.3E+02 0.0043 26.8 6.2 63 202-267 144-210 (229)
200 1f76_A Dihydroorotate dehydrog 24.8 2.8E+02 0.0095 25.7 9.0 74 193-267 152-245 (336)
201 1eye_A DHPS 1, dihydropteroate 24.7 1.9E+02 0.0064 26.7 7.5 92 189-281 22-129 (280)
202 2qr6_A IMP dehydrogenase/GMP r 24.2 1.5E+02 0.0053 28.4 7.1 70 200-270 225-309 (393)
203 2y88_A Phosphoribosyl isomeras 24.2 1.1E+02 0.0038 26.8 5.7 68 199-268 154-226 (244)
204 2yw3_A 4-hydroxy-2-oxoglutarat 23.8 97 0.0033 27.1 5.1 54 203-269 79-132 (207)
205 3oix_A Putative dihydroorotate 23.4 4.7E+02 0.016 24.7 10.8 83 182-267 130-227 (345)
206 2hbv_A 2-amino-3-carboxymucona 23.4 4.2E+02 0.015 24.1 11.3 115 124-245 56-177 (334)
207 3no3_A Glycerophosphodiester p 23.1 61 0.0021 28.9 3.7 35 239-273 196-230 (238)
208 1xi3_A Thiamine phosphate pyro 23.0 1.1E+02 0.0037 26.2 5.3 64 203-269 124-192 (215)
209 1wbh_A KHG/KDPG aldolase; lyas 23.0 1.2E+02 0.0041 26.7 5.6 55 202-269 83-137 (214)
210 3vkj_A Isopentenyl-diphosphate 22.9 3.4E+02 0.012 25.9 9.2 73 189-267 133-218 (368)
211 1mxs_A KDPG aldolase; 2-keto-3 22.9 96 0.0033 27.6 4.9 55 202-269 93-147 (225)
212 2wm1_A 2-amino-3-carboxymucona 22.5 4.4E+02 0.015 23.9 11.8 115 124-245 52-174 (336)
213 1vc4_A Indole-3-glycerol phosp 22.5 2.8E+02 0.0094 25.0 8.1 116 126-266 65-180 (254)
214 3l5l_A Xenobiotic reductase A; 22.4 1.1E+02 0.0037 29.3 5.5 77 191-269 243-327 (363)
215 1rd5_A Tryptophan synthase alp 22.1 2.2E+02 0.0074 25.4 7.4 41 225-267 189-230 (262)
216 2gou_A Oxidoreductase, FMN-bin 21.9 1.7E+02 0.0059 27.9 6.9 78 189-269 245-324 (365)
217 3ffs_A Inosine-5-monophosphate 21.6 1.6E+02 0.0056 28.7 6.7 76 183-266 136-211 (400)
218 1xm3_A Thiazole biosynthesis p 21.4 1.2E+02 0.0041 27.5 5.4 41 227-269 168-209 (264)
219 3lab_A Putative KDPG (2-keto-3 21.2 1.8E+02 0.0061 25.9 6.3 77 181-267 13-92 (217)
220 1aj0_A DHPS, dihydropteroate s 21.1 2.5E+02 0.0086 25.9 7.6 80 199-281 43-138 (282)
221 4a29_A Engineered retro-aldol 21.0 1E+02 0.0035 28.3 4.7 40 229-268 194-234 (258)
222 3khj_A Inosine-5-monophosphate 20.9 1.1E+02 0.0039 29.3 5.3 118 129-267 107-236 (361)
223 4af0_A Inosine-5'-monophosphat 20.9 1.6E+02 0.0054 30.1 6.5 77 184-265 272-348 (556)
224 2oog_A Glycerophosphoryl diest 20.7 77 0.0026 29.0 4.0 44 227-273 232-275 (287)
225 2pz0_A Glycerophosphoryl diest 20.5 80 0.0027 28.3 4.0 44 227-273 202-245 (252)
226 3tqv_A Nicotinate-nucleotide p 20.5 1.3E+02 0.0043 28.1 5.3 62 204-273 215-276 (287)
227 1rvg_A Fructose-1,6-bisphospha 20.2 1.3E+02 0.0044 28.3 5.4 128 127-264 84-229 (305)
228 3tfx_A Orotidine 5'-phosphate 20.2 4.9E+02 0.017 23.6 10.3 124 127-271 71-220 (259)
229 2ztj_A Homocitrate synthase; ( 20.2 2.2E+02 0.0075 27.3 7.3 72 191-266 22-93 (382)
230 1ma1_A Superoxide dismutase; m 20.0 1.5E+02 0.0052 26.1 5.5 56 330-385 36-123 (205)
No 1
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=5.7e-108 Score=809.80 Aligned_cols=361 Identities=29% Similarity=0.502 Sum_probs=343.9
Q ss_pred CeEEEEeecCCCceeEEEEcCCCCceeecCcccccccCcccCcCCHHHHhcCCCCCCceeecccchhccCCCcccccccC
Q 015981 1 MKFAVKALSSGKARAGVVHLGSCPSPIETPCLLLSTRKGLPIFISPDLLSSLPSPDSNLLQFSPLHFSEGPSPKTISSIG 80 (397)
Q Consensus 1 m~F~v~~~~~~~aR~G~l~~~~~~~~i~TP~f~~~t~~g~~~~Lt~d~l~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~g 80 (397)
|.|+|+.. ++.||+|+|+|+ |++|+||+||++++.|.+++|||++|+++ ++++++.|+|||+++||.+++++.|
T Consensus 13 ~~~~~~~~-~~~aR~G~l~t~--hg~i~TP~fmPVgt~gtvk~lt~~~l~~~---g~~iiL~NtyhL~lrPg~~~i~~~G 86 (381)
T 2ash_A 13 MEFEVKKT-FGKARLGVMKLH--HGAVETPVFMPVGTNASVKLLTPRDLEEA---GAEIILSNTFHLMLKPGVEIIKLHR 86 (381)
T ss_dssp CEEEEEEE-ETTEEEEEEEET--TEEEEESEEEEEESSSSCTTCCHHHHHHH---TCSCEEECCHHHHHTTCHHHHHHTT
T ss_pred eeEEEEcC-CCceeeEEEEEC--CeeEECCeEEEeecCCcCCcCCHHHHHHc---CCCEEehhHHHHhhCCcHHHHHHcc
Confidence 78999653 467999999999 78999999999999999999999999998 8999999999999999999999999
Q ss_pred CcccccCCCCceeEeecCCccCCccCCCCCCCCceEEEcC-CC-ceecChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHH
Q 015981 81 GLHQMVGLHEYGFAAVARDSIQCLPECGSTNKTGASFETP-CG-RRLIKPVEYMEMITSMKPNLWATLADEVPAWANNKR 158 (397)
Q Consensus 81 Glh~f~~~~~~~~~~sg~~~~~~~~~~~~~~~~gv~~~s~-~G-~~~ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr 158 (397)
|||+||+|+++++||||+||++|+.+.+ .+++||.|+|+ +| ++.+|||++|++|+.|||||+|+||+++++..++++
T Consensus 87 GLh~Fm~w~~~ilTDSGgfQv~sl~~~~-i~e~Gv~F~s~~dG~~~~ltpe~~~~iQ~~lgsDI~m~lDe~~~~~~~~~~ 165 (381)
T 2ash_A 87 GLHNFMGWKRPILTDSGGFQVFSLPKIR-IDDEGVVFRSPIDGSKVFLNPEISMEVQIALGSDICMVFDHCPVPDADYEE 165 (381)
T ss_dssp SHHHHHTCCSCEEECCCHHHHHTSTTCE-ECSSCEEEECTTTCCEEEECHHHHHHHHHHHTCSEEECCCCCCC--CCHHH
T ss_pred ChHhhccCCCCeeecccccccccccccc-cCCCCceEecCcCCceeecCHHHHHHHHHHhCCCEEEECCcCCCCCCCHHH
Confidence 9999999999999999999999998877 89999999999 78 679999999999999999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCC
Q 015981 159 NKTSVDRTVKWLDECIARSPA-GGAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLP 237 (397)
Q Consensus 159 ~~~sverT~~w~~~~l~~~~~-~~~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp 237 (397)
+++||+||++|+++|++.+.+ .+.+|||||||.++|||++|++++.+++++||+|||+++||+.+++.++|+.+.+.||
T Consensus 166 ~~~sv~rT~rWa~r~~~~~~~~~~~lfgiVQGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvGe~~~~~~~~l~~~~~~LP 245 (381)
T 2ash_A 166 VKEATERTYRWALRSKKAFKTENQALFGIVQGGIYPDLRRESALQLTSIGFDGYAIGGLSIGEERSLTLEMTEVTVEFLP 245 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCHHHHHHHHHHHHTTCCSEEEECSCSSSSCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCcEEEEEcCCCCHHHHHHHHHHHHhcCCceEEecCcccCCCHHHHHHHHHHHHhhCC
Confidence 999999999999999997754 3559999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCChHHHHHHHHcCCcEEecchhHHhhhcceeecccCCccccccccccccCCCCCcceeeecCcccccCCC
Q 015981 238 KDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLTIGGFALTFPLDRTEKNDYNYQLSDQGSDRTKINLRATVYRKDAT 317 (397)
Q Consensus 238 ~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a~~G~al~f~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~D~~ 317 (397)
++||||+||+|+|.+|+.+|++|||+|||++|++.||+|.|||. .+++||++.+|+.|++
T Consensus 246 ~~kPRyLmGvG~P~~il~~V~~GvDmFDcv~Ptr~Ar~G~~lt~--------------------~G~i~l~~~~y~~D~~ 305 (381)
T 2ash_A 246 EDKPRYFMGGGSPELILELVDRGVDMFDSVFPTRIARHGTALTW--------------------NGKLNLKASYNKRSLE 305 (381)
T ss_dssp TTSCEEECSCCCHHHHHHHHTTTCCEEEESHHHHHHHTTEEEET--------------------TEEEETTSGGGTTCCS
T ss_pred CCCcEEEcCCCCHHHHHHHHHcCCCEEeCChhhhhhcCceEecc--------------------CCceEecchhhccCCC
Confidence 99999999999999999999999999999999999999999983 5899999999999999
Q ss_pred CCCCCCCCcccccccHHHHHHHhhcChhhHhHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015981 318 PIVEDCCCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSRRE 388 (397)
Q Consensus 318 pl~~~C~C~tC~~~traYlhHLl~~~Eml~~~LL~~HNl~~~~~~~~~iR~aI~~g~l~~~~~~f~~~~~~ 388 (397)
||+++|+||||++|||||||||++++|||+++||++||||+|.+||++||+||++|+|++|+++|+++++.
T Consensus 306 Pld~~C~C~tC~~ysRAYLhHL~~~~E~l~~~LltiHNl~~~~~l~~~iR~aI~~g~f~e~~~~f~~~~~~ 376 (381)
T 2ash_A 306 PVDERCGCYTCKNFTRSYIHHLFDRGEVLGQILLTIHNINFMISLMKEVRRSIESGTFKELKSKVVEVYSS 376 (381)
T ss_dssp CSCTTCCSHHHHHCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTC-
T ss_pred CCCCCCCCccCcccCHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988764
No 2
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=100.00 E-value=4.1e-108 Score=814.81 Aligned_cols=361 Identities=25% Similarity=0.475 Sum_probs=325.4
Q ss_pred CeEEE-EeecCCCceeEEEEcCCCCceeecCcccccccCcccCcCCHHHHhcCCCCCCceeecccchhccCCCccccccc
Q 015981 1 MKFAV-KALSSGKARAGVVHLGSCPSPIETPCLLLSTRKGLPIFISPDLLSSLPSPDSNLLQFSPLHFSEGPSPKTISSI 79 (397)
Q Consensus 1 m~F~v-~~~~~~~aR~G~l~~~~~~~~i~TP~f~~~t~~g~~~~Lt~d~l~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~ 79 (397)
|+|+| +.+ ++||+|+|+|+ |+.|+||+||+++++|.+++||||+|+++ ++++++.|+|||+++||.+++++.
T Consensus 14 m~F~i~~~~--~~aR~G~l~t~--hg~i~TP~fmpVgt~gtvk~lt~~~l~~~---g~~iil~Ntyhl~lrPg~~~i~~~ 86 (386)
T 3bld_A 14 FSFSIAARE--GKARTGTIEMK--RGVIRTPAFMPVGTAATVKALKPETVRAT---GADIILGNTYHLMLRPGAERIAKL 86 (386)
T ss_dssp CEEEEEEEE--TTEEEEEEEET--TEEEEESEECCEESSSSBTTCCHHHHHHT---TCSCEEECHHHHHHTTCHHHHHHT
T ss_pred eEEEEEEEE--CCeeeEEEEeC--CeeeECCeeEEeecCCcCCcCCHHHHHHc---CCCEEecchHHHhhcCcHHHHHHh
Confidence 68999 444 78999999999 78999999999999999999999999998 899999999999999999999999
Q ss_pred CCcccccCCCCceeEeecCCccCCccCCCCCCCCceEEEcC-CC-ceecChhhHHHHHHhcCCcEEEEcCCCCCCCCCHH
Q 015981 80 GGLHQMVGLHEYGFAAVARDSIQCLPECGSTNKTGASFETP-CG-RRLIKPVEYMEMITSMKPNLWATLADEVPAWANNK 157 (397)
Q Consensus 80 gGlh~f~~~~~~~~~~sg~~~~~~~~~~~~~~~~gv~~~s~-~G-~~~ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~k 157 (397)
||||+||+|+++++||||+||++|+.+..+++++||.|+|+ +| ++.+|||+++++|+.+||||+|+||+++++..++|
T Consensus 87 gGLh~Fm~w~~~ilTDSGgfQv~sl~~~~~i~e~Gv~F~s~~dG~~~~ltpe~~~~iq~~lg~DI~m~lDe~~~~~~~~~ 166 (386)
T 3bld_A 87 GGLHSFMGWDRPILTDSGGFQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECTPYPATPS 166 (386)
T ss_dssp TCHHHHHTCCSCEEECCSHHHHHC------CBTTBCCCCC--------CCHHHHHHHHHHHTCSEEECCCCCCCSSCCHH
T ss_pred CChHhhccCCCCceeecCceEEEeccccccCCCCceeeecCCCCceeecCHHHHHHHHHHhCCCEEEecCcCCCCCCCHH
Confidence 99999999999999999999999999999999999999998 77 78999999999999999999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC--C----CCeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHH
Q 015981 158 RNKTSVDRTVKWLDECIARSPA--G----GAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNA 231 (397)
Q Consensus 158 r~~~sverT~~w~~~~l~~~~~--~----~~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~ 231 (397)
++++||+||++|+++|++.+.+ . +.+|||||||.++|||++|++++.+++++||+|||+++||+.+++.++|+.
T Consensus 167 ~~~~sv~rT~rW~~r~~~~~~~~~~~~~~~~lfgiVQGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvge~~~~~~~~l~~ 246 (386)
T 3bld_A 167 RAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAGGEGQDEMFRVLDF 246 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSHHHHHHCEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccccccEEEEEcCCCCHHHHHHHHHHHHhcCCCCeeEcCcccCCCHHHHHHHHHH
Confidence 9999999999999999986543 2 569999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhhhcceeecccCCccccccccccccCCCCCcceeeecCcc
Q 015981 232 VTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLTIGGFALTFPLDRTEKNDYNYQLSDQGSDRTKINLRATV 311 (397)
Q Consensus 232 ~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a~~G~al~f~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~ 311 (397)
+.+.||++||||+||+|+|.+|+.+|++|||+|||++|++.||+|.||+. .+++||++.+
T Consensus 247 ~~~~LP~~kPRylmGvg~P~~il~~V~~GvDmFDcv~ptr~Ar~G~alt~--------------------~g~i~l~~~~ 306 (386)
T 3bld_A 247 SVPMLPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW--------------------DGPINIRNAR 306 (386)
T ss_dssp HGGGSCTTSCEEETTCCCHHHHHHHHTTTCCEEC----------CEECCT--------------------TCCEETTSGG
T ss_pred HHhhCCCCCcEEEeCCCCHHHHHHHHHcCCCEEeCcHHHHHHhCCEEEcC--------------------CccEECcchh
Confidence 99999999999999999999999999999999999999999999999983 5789999999
Q ss_pred cccCCCCCCCCCCCcccccccHHHHHHHhhcChhhHhHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015981 312 YRKDATPIVEDCCCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSRRE 388 (397)
Q Consensus 312 ~~~D~~pl~~~C~C~tC~~~traYlhHLl~~~Eml~~~LL~~HNl~~~~~~~~~iR~aI~~g~l~~~~~~f~~~~~~ 388 (397)
|+.|++||+++|+||||++|||||||||++++||||++||++||||+|.+||++||++|++|+|++|+++|+++++.
T Consensus 307 y~~D~~Pld~~C~C~tC~~ysRAYLhHL~~~~E~l~~~LltiHNl~~~~~l~~~iR~aI~~g~f~e~~~~f~~~~~~ 383 (386)
T 3bld_A 307 FSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFA 383 (386)
T ss_dssp GTTCCSCSSSSCCSHHHHHCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHC-
T ss_pred hccCCCCCCCCCCCccccccCHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998864
No 3
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=100.00 E-value=3e-87 Score=699.85 Aligned_cols=329 Identities=20% Similarity=0.224 Sum_probs=303.4
Q ss_pred CeEEEEeecCCCceeEEEEcCCCCceeecCcccccccCcccCcCCHHHHhcCCCCCCceeecccchhccCCCcccccccC
Q 015981 1 MKFAVKALSSGKARAGVVHLGSCPSPIETPCLLLSTRKGLPIFISPDLLSSLPSPDSNLLQFSPLHFSEGPSPKTISSIG 80 (397)
Q Consensus 1 m~F~v~~~~~~~aR~G~l~~~~~~~~i~TP~f~~~t~~g~~~~Lt~d~l~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~g 80 (397)
|+|+|... +++||+|+|+|+ |++|+||+||++++ |.+++|||++++++ ++++++.|+||++.+|+.+++++.|
T Consensus 8 ~~F~i~~~-~~~aR~G~l~t~--hg~i~TP~fmpvgt-~~vk~lt~~~l~~~---g~~iil~Ntyhl~lrp~~~~i~~~g 80 (582)
T 1iq8_A 8 LKFEIKAR-DGAGRIGKLEVN--GKKIETPAIMPVVN-PKQMVVEPKELEKM---GFEIIITNSYIIYKDEELRRKALEL 80 (582)
T ss_dssp EEEEEEEE-ETTEEEEEEEET--TEEEEESEEEEBCC-SSSCSSCHHHHHHT---TCCEEEEEHHHHHHCHHHHHHHHHH
T ss_pred eEEEEEEe-eCCceEEEEEeC--CeeeeCCceEeecC-CcCCCCCHHHHHhc---CCCceecchhheeeCcchhhhhhcC
Confidence 57999433 378999999999 78999999999998 88999999999998 8899999999999999999999999
Q ss_pred CcccccCCCCceeEeecCCccCCccCCCCCCCCceEEEcCCCceecChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHH
Q 015981 81 GLHQMVGLHEYGFAAVARDSIQCLPECGSTNKTGASFETPCGRRLIKPVEYMEMITSMKPNLWATLADEVPAWANNKRNK 160 (397)
Q Consensus 81 Glh~f~~~~~~~~~~sg~~~~~~~~~~~~~~~~gv~~~s~~G~~~ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~ 160 (397)
|||+||+|+++++||||+||++++ |+..+|||+++++|+.+||||+|+||+++++..+.++++
T Consensus 81 Glh~F~~w~~~iltDSGgfQv~s~-----------------g~~~ltpe~~~~iq~~lg~DI~m~lD~~~~~~~~~~~~~ 143 (582)
T 1iq8_A 81 GIHRMLDYNGIIEVDSGSFQLMKY-----------------GSIEVSNREIIEFQHRIGVDIGTFLDIPTPPDAPREQAV 143 (582)
T ss_dssp HHHHHHTCCSEEEEECSTTHHHHS-----------------SCCSSCHHHHHHHHHHTTCSBBCCCCCCCCTTCCHHHHH
T ss_pred ChheeccCCCCceecccccccccc-----------------cccccCHHHHHHHHHhhCCCEEEecCcCCCCCCCHHHHH
Confidence 999999999999999999998753 456899999999999999999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC---chhhHHHHHHHHHcCCC
Q 015981 161 TSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE---SMEERPSLLNAVTDNLP 237 (397)
Q Consensus 161 ~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge---~~~~~~~~v~~~~~~Lp 237 (397)
+||+||++|+++|++.. ++.+|||||||.+.|||++|++++.+++++||+|||+.... +.+++.++|..+.+.||
T Consensus 144 ~s~~rT~rw~~r~~~~~--~~~lfgiVQGg~~~dLR~~sa~~l~~~~~~G~aIGg~~~~~e~~~~~~~~~~l~~~~~~LP 221 (582)
T 1iq8_A 144 KELEITLSRAREAEEIK--EIPMNATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMALR 221 (582)
T ss_dssp HHHHHHHHHHHHHHHHC--CSCBBCCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcC--CCeEEEEEeCCCCHHHHHHHHHHHHhCCCCeEEecCccchhhhccHHHHHHHHHHHHhhCC
Confidence 99999999999999873 36699999999999999999999999999999999975322 23556889999999999
Q ss_pred CCCcccccCCCChHHHHHHHHcCCcEEecchhHHhhhcceeecccCCccccccccccccCCCCCcceeeecCcccccCCC
Q 015981 238 KDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLTIGGFALTFPLDRTEKNDYNYQLSDQGSDRTKINLRATVYRKDAT 317 (397)
Q Consensus 238 ~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a~~G~al~f~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~D~~ 317 (397)
++||||+||+|+|.+|+.+|++|||+|||++|++.|++|.|||+ .+.+||++.+|
T Consensus 222 ~~kPr~lmGvg~P~~i~~~v~~GvD~FDcv~ptr~Ar~G~~~t~--------------------~g~~~l~~~~~----- 276 (582)
T 1iq8_A 222 PDRPVHLFGAGHPIVFALAVAMGVDLFDSASYALYAKDDRYMTP--------------------EGTKRLDELDY----- 276 (582)
T ss_dssp TTSCEEETTCCCGGGHHHHHHTTCCEEEESHHHHHHHTTEEEET--------------------TEEEEGGGCSS-----
T ss_pred CCCcEEecCCCCHHHHHHHHHcCCcEEecchhhhhhcCCEEEec--------------------CCceecccccc-----
Confidence 99999999999999999999999999999999999999999995 47899999877
Q ss_pred CCCCCCCCcccccccHHHHHHHhhcChhhHhHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015981 318 PIVEDCCCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSR 386 (397)
Q Consensus 318 pl~~~C~C~tC~~~traYlhHLl~~~Eml~~~LL~~HNl~~~~~~~~~iR~aI~~g~l~~~~~~f~~~~ 386 (397)
++|+||||++|||||||||++++| ++||++||||+|.+||++||+||++|+|++|+++|.+..
T Consensus 277 ---~~C~C~tC~~~sraYl~HL~~~~~---~~Ll~iHNl~~~~~l~~~iR~aI~~g~~~~~~~~~~r~h 339 (582)
T 1iq8_A 277 ---FPCSCPVCSKYTPQELREMPKEER---TRLLALHNLWVIKEEIKRVKQAIKEGELWRLVDERARSH 339 (582)
T ss_dssp ---CCCCSTTTTTCCHHHHTTSCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ---CCCCCcccCccCHHHHHHhhhhhh---HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhC
Confidence 489999999999999999999875 899999999999999999999999999999999998544
No 4
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.04 E-value=0.045 Score=52.26 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccC---CC-ChHHHHHHHHcCCcEEe
Q 015981 190 GSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICG---LG-LPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 190 g~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G---~g-~P~~il~~v~~GvD~FD 265 (397)
-.+++.-.+.++.+.+.|++-+.|.-......+.+..++++.+.+.+| +.|..+++ .| ...+++.|++.|+|.||
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd 233 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVP-RERLAGHFHDTYGQALANIYASLLEGIAVFD 233 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSC-GGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEeCCCccHHHHHHHHHHHhCCCEEE
Confidence 367788888888888999999988754444567788999999999987 46765553 66 36789999999999999
Q ss_pred cch
Q 015981 266 SAY 268 (397)
Q Consensus 266 ~~~ 268 (397)
++.
T Consensus 234 ~tv 236 (302)
T 2ftp_A 234 SSV 236 (302)
T ss_dssp EBG
T ss_pred ecc
Confidence 985
No 5
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.45 E-value=0.12 Score=50.15 Aligned_cols=86 Identities=14% Similarity=0.025 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcc--ccc-CCC-ChHHHHHHHHcCCcEEec
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPR--MIC-GLG-LPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr--~l~-G~g-~P~~il~~v~~GvD~FD~ 266 (397)
.+.+.-.+.++.+.+.|++.+.|.-....-.+.+..++++.+.+.+| +.|. |.+ -.| .....+.|++.|+|.||+
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p-~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~ 244 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYP-DIHFEFHGHNDYDLSVANSLQAIRAGVKGLHA 244 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCT-TSCEEEECBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcC-CCeEEEEecCCcchHHHHHHHHHHhCCCEEEE
Confidence 35666777888899999999988765555677888999999999997 4565 333 233 377899999999999999
Q ss_pred chhHHhhhcce
Q 015981 267 AYIYHLTIGGF 277 (397)
Q Consensus 267 ~~p~~~a~~G~ 277 (397)
+.--.-.+.|.
T Consensus 245 tv~GlG~~aGN 255 (337)
T 3ble_A 245 SINGLGERAGN 255 (337)
T ss_dssp BGGGCSSTTCB
T ss_pred ecccccccccc
Confidence 96433333343
No 6
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=93.38 E-value=0.23 Score=47.18 Aligned_cols=81 Identities=11% Similarity=-0.038 Sum_probs=63.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCC--Ccc--ccc-CCC-ChHHHHHHHHcCCc
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKD--WPR--MIC-GLG-LPEEVLQGVAAGVD 262 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~--kpr--~l~-G~g-~P~~il~~v~~GvD 262 (397)
|-.+++.-.+.++.+.+.|++-+.|.-....-.+.+..++++.+.+.+|.. .|. |.+ -.| .....+.|++.|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~ 224 (293)
T 3ewb_X 145 TRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGAR 224 (293)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCC
Confidence 446788888889999999999998887665667788899999999999852 343 444 233 36789999999999
Q ss_pred EEecchh
Q 015981 263 LFDSAYI 269 (397)
Q Consensus 263 ~FD~~~p 269 (397)
.||++.-
T Consensus 225 ~vd~sv~ 231 (293)
T 3ewb_X 225 RVEGTIN 231 (293)
T ss_dssp EEEEBGG
T ss_pred EEEeecc
Confidence 9999964
No 7
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=93.35 E-value=0.13 Score=49.19 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=83.9
Q ss_pred HHHHHhcCCcEEEEcCCCCC-------CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-e-------EE-eecCCCCHHH
Q 015981 132 MEMITSMKPNLWATLADEVP-------AWANNKRNKTSVDRTVKWLDECIARSPAGGA-V-------FG-SIVGGSNIEE 195 (397)
Q Consensus 132 ~~~q~~i~pDi~~~L~d~~~-------~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-l-------f~-~iqGg~~~~l 195 (397)
++.....|.|++-.+ ..+. ...+.++....+..+.+++++. +. + |+ +-.|-.+++.
T Consensus 87 i~~a~~~g~~~v~i~-~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~-------G~~v~~~i~~~~~~~~~~~~~~~~ 158 (307)
T 1ydo_A 87 LENALEGGINEACVF-MSASETHNRKNINKSTSESLHILKQVNNDAQKA-------NLTTRAYLSTVFGCPYEKDVPIEQ 158 (307)
T ss_dssp HHHHHHHTCSEEEEE-EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT-------TCEEEEEEECTTCBTTTBCCCHHH
T ss_pred HHHHHhCCcCEEEEE-eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-------CCEEEEEEEEEecCCcCCCCCHHH
Confidence 444445588887554 2221 1234444445555555555431 11 2 21 1134567888
Q ss_pred HHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccC---CC-ChHHHHHHHHcCCcEEecch
Q 015981 196 RKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICG---LG-LPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 196 R~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G---~g-~P~~il~~v~~GvD~FD~~~ 268 (397)
-.+.++.+.+.|++-+.|.-....-.+.+..++++.+.+.+| +.|.-+++ .| .....+.|++.|+|.||++.
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~-~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv 234 (307)
T 1ydo_A 159 VIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP-ANQIALHFHDTRGTALANMVTALQMGITVFDGSA 234 (307)
T ss_dssp HHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSC-GGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBG
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcc
Confidence 888899999999999888765545677888999999999987 45653332 33 36788999999999999985
No 8
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=93.04 E-value=0.29 Score=46.37 Aligned_cols=79 Identities=15% Similarity=0.081 Sum_probs=60.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcc--ccc-CCCC-hHHHHHHHHcCCcEE
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPR--MIC-GLGL-PEEVLQGVAAGVDLF 264 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr--~l~-G~g~-P~~il~~v~~GvD~F 264 (397)
|-.+.+.-.+.++.+.+.|++.+.|.-....-.+.+..++++++.+.+| +.|. |.+ ..|- ....+.++..|+|.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~-~~~i~~H~Hn~~Gla~An~laA~~aGa~~v 229 (298)
T 2cw6_A 151 GKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVP-LAALAVHCHDTYGQALANTLMALQMGVSVV 229 (298)
T ss_dssp BSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSC-GGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 4457888888899999999998888755445677888999999998887 3454 443 2442 677899999999999
Q ss_pred ecch
Q 015981 265 DSAY 268 (397)
Q Consensus 265 D~~~ 268 (397)
|++.
T Consensus 230 d~tv 233 (298)
T 2cw6_A 230 DSSV 233 (298)
T ss_dssp EEBT
T ss_pred Eeec
Confidence 9974
No 9
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=92.35 E-value=2 Score=44.15 Aligned_cols=126 Identities=12% Similarity=0.166 Sum_probs=86.3
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEee--cCC--CCHHHHHHHHHH
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSI--VGG--SNIEERKRCAQE 202 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~i--qGg--~~~~lR~~sa~~ 202 (397)
.+..++.....|.|++-.+ +.+... +.+..+.+++++. +. +-+.+ ..| .+.+.-.+.++.
T Consensus 119 ~~~~ve~a~~aGvd~vrIf-~s~sd~-------~ni~~~i~~ak~~-------G~~v~~~i~~~~~~~~~~e~~~~~a~~ 183 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVF-DAMNDP-------RNMAHAMAAVKKA-------GKHAQGTICYTISPVHTVEGYVKLAGQ 183 (539)
T ss_dssp HHHHHHHHHHTTCCEEEEC-CTTCCT-------HHHHHHHHHHHHT-------TCEEEEEEECCCSTTCCHHHHHHHHHH
T ss_pred cHHHHHHHHhCCCCEEEEE-EehhHH-------HHHHHHHHHHHHC-------CCeEEEEEEeeeCCCCCHHHHHHHHHH
Confidence 3556777778899998776 433221 2344555555431 21 22222 222 467878888999
Q ss_pred HHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEecch
Q 015981 203 VAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 203 l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~~~ 268 (397)
+.+.|.+-+.|.-....-.+.+..++|+++.+.+|.+.|..++ -.| .....+.|+..|+|.||++.
T Consensus 184 l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti 253 (539)
T 1rqb_A 184 LLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAI 253 (539)
T ss_dssp HHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBC
T ss_pred HHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEec
Confidence 9999999888876555566788899999999988855675443 233 36789999999999999995
No 10
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.33 E-value=1.9 Score=41.55 Aligned_cols=136 Identities=11% Similarity=0.042 Sum_probs=87.3
Q ss_pred hhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEee--cCCCCHHHHHHHHHHHHhc
Q 015981 129 VEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSI--VGGSNIEERKRCAQEVAVR 206 (397)
Q Consensus 129 e~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~i--qGg~~~~lR~~sa~~l~~~ 206 (397)
++.++.....|.|.+... +.+.. .+. ++...+++++. . -.+.+.+ ....+++.-.+.++.+.+.
T Consensus 96 ~~~i~~a~~aGvd~v~I~-~~~s~---~~~----~~~~i~~ak~~---G---~~v~~~~~~a~~~~~e~~~~ia~~~~~~ 161 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVA-THCTE---ADV----SKQHIEYARNL---G---MDTVGFLMMSHMIPAEKLAEQGKLMESY 161 (345)
T ss_dssp HHHHHHHHHHTCCEEEEE-EETTC---GGG----GHHHHHHHHHH---T---CEEEEEEESTTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEE-EeccH---HHH----HHHHHHHHHHC---C---CEEEEEEEeCCCCCHHHHHHHHHHHHHC
Confidence 455665566799987654 32221 112 22233333321 1 1133333 4456777777788888888
Q ss_pred CCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEecchhHHhhhccee
Q 015981 207 NVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDSAYIYHLTIGGFA 278 (397)
Q Consensus 207 ~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~~~p~~~a~~G~a 278 (397)
|+.-+.|.+....-.+.+..++++++.+.+|++.|..++ -.| .....+.|++.|+|.||++.--.-.+.|.+
T Consensus 162 Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~~aGN~ 237 (345)
T 1nvm_A 162 GATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNA 237 (345)
T ss_dssp TCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBC
T ss_pred CCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccCCccCc
Confidence 999888888765566788899999999999867787553 123 367889999999999999964433334433
No 11
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=92.26 E-value=1.9 Score=42.07 Aligned_cols=142 Identities=13% Similarity=0.112 Sum_probs=86.6
Q ss_pred ChhhHHHHHHhcC--CcEEEEcCCCCCCCCCHHHH--HHHHHHHHHHHHHHHHhCC--CCCCeEEeecCCCCHHHHHHHH
Q 015981 127 KPVEYMEMITSMK--PNLWATLADEVPAWANNKRN--KTSVDRTVKWLDECIARSP--AGGAVFGSIVGGSNIEERKRCA 200 (397)
Q Consensus 127 tpe~~~~~q~~i~--pDi~~~L~d~~~~~~~~kr~--~~sverT~~w~~~~l~~~~--~~~~lf~~iqGg~~~~lR~~sa 200 (397)
++++|.+..+.+. +|.+.. .-.||...+..-. ...+.+-++.+.+..+.-. .+.+++.=+-.+.+.+.-.+.+
T Consensus 162 ~~~dy~~~~~~~~~~ad~iel-NisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia 240 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVV-NVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEE-ECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHhhhCCEEEE-ECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHH
Confidence 6899999888887 676644 2455544321100 1122222333333221111 1234666666666665556677
Q ss_pred HHHHhcCCceEEEcCccCC------------------Cc-hhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC
Q 015981 201 QEVAVRNVSGYWIGGFGLG------------------ES-MEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG 260 (397)
Q Consensus 201 ~~l~~~~~~G~~IgGl~~g------------------e~-~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G 260 (397)
+.+.+.+++|+.+-+-..+ .. ...-.++|..+.+.++.+.|.... |+.++.++..++..|
T Consensus 241 ~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~G 320 (367)
T 3zwt_A 241 SVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG 320 (367)
T ss_dssp HHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcC
Confidence 7777889999987543211 11 112357788888888877887755 888999999999999
Q ss_pred CcEEecchh
Q 015981 261 VDLFDSAYI 269 (397)
Q Consensus 261 vD~FD~~~p 269 (397)
+|.+-..-+
T Consensus 321 Ad~V~vgra 329 (367)
T 3zwt_A 321 ASLVQLYTA 329 (367)
T ss_dssp CSEEEESHH
T ss_pred CCEEEECHH
Confidence 998775533
No 12
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.03 E-value=0.29 Score=46.22 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEec
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~ 266 (397)
.+++.-.+.++.+.+.|++-+.|.-......+.+..++++++.+.+| +.|..++ +.| ...+++.++..|++.||+
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAP-AHSLAGHYHDTGGRALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSC-GGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCcchHHHHHHHHHHhCCCEEEe
Confidence 57788888888888999999888743333567788999999999887 3555444 355 356789999999999998
Q ss_pred c
Q 015981 267 A 267 (397)
Q Consensus 267 ~ 267 (397)
+
T Consensus 231 s 231 (295)
T 1ydn_A 231 S 231 (295)
T ss_dssp B
T ss_pred c
Confidence 7
No 13
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=91.59 E-value=3.2 Score=41.80 Aligned_cols=124 Identities=16% Similarity=0.213 Sum_probs=84.0
Q ss_pred hhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEee--cCC--CCHHHHHHHHHHH
Q 015981 129 VEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSI--VGG--SNIEERKRCAQEV 203 (397)
Q Consensus 129 e~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~i--qGg--~~~~lR~~sa~~l 203 (397)
+..++.....|.|++-.+ +.+... +.+..+.+++++. +. +.+.+ ..| .+.+.-.+.++.+
T Consensus 103 ~~~v~~a~~~Gvd~i~if-~~~sd~-------~ni~~~i~~ak~~-------G~~v~~~i~~~~~~~~~~e~~~~~a~~l 167 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVF-DAMNDV-------RNMQQALQAVKKM-------GAHAQGTLCYTTSPVHNLQTWVDVAQQL 167 (464)
T ss_dssp HHHHHHHHHTTCCEEEEC-CTTCCT-------HHHHHHHHHHHHT-------TCEEEEEEECCCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEE-EecCHH-------HHHHHHHHHHHHC-------CCEEEEEEEeeeCCCCCHHHHHHHHHHH
Confidence 456667778899998766 333221 2344555555431 22 33333 222 3677788889999
Q ss_pred HhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEecchh
Q 015981 204 AVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 204 ~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~~~p 269 (397)
.+.|.+-+.|.-....-.+.+..++|+++.+.+ +.|..++ -.| .....+.|++.|+|.||++.-
T Consensus 168 ~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~--~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~ 235 (464)
T 2nx9_A 168 AELGVDSIALKDMAGILTPYAAEELVSTLKKQV--DVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAIS 235 (464)
T ss_dssp HHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC--CSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCG
T ss_pred HHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc--CCeEEEEECCCCChHHHHHHHHHHhCCCEEEEecc
Confidence 999999988876555566788899999998887 4665443 233 377899999999999999954
No 14
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.22 E-value=1.6 Score=41.25 Aligned_cols=88 Identities=7% Similarity=-0.043 Sum_probs=60.3
Q ss_pred CeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCcc-----C-------------------CCc-hhhHHHHHHHHHcCC
Q 015981 182 AVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFG-----L-------------------GES-MEERPSLLNAVTDNL 236 (397)
Q Consensus 182 ~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~-----~-------------------ge~-~~~~~~~v~~~~~~L 236 (397)
+++.=+-++.+.+.-.+.++.+.+.|++++.+.+.. . |.. .....+.+..+.+.+
T Consensus 160 Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~ 239 (311)
T 1jub_A 160 PLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRL 239 (311)
T ss_dssp CEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTS
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhc
Confidence 355545555666555566777788899998775531 0 111 112356788888888
Q ss_pred CCCCccccc-CCCChHHHHHHHHcCCcEEecchh
Q 015981 237 PKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 237 p~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
+.+.|.... |+.+|.++..++..|+|.+=..-+
T Consensus 240 ~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~ 273 (311)
T 1jub_A 240 KPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTA 273 (311)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred CCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchH
Confidence 777887754 889999999999999998865533
No 15
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=91.02 E-value=3.4 Score=39.41 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=82.1
Q ss_pred ChhhHHHHHHhcC--CcEEEEcCCCCCCCCCHHHH--HHHHHHHHHHHHHHHHh----CCCCCCeEEeecCCCCHHHHHH
Q 015981 127 KPVEYMEMITSMK--PNLWATLADEVPAWANNKRN--KTSVDRTVKWLDECIAR----SPAGGAVFGSIVGGSNIEERKR 198 (397)
Q Consensus 127 tpe~~~~~q~~i~--pDi~~~L~d~~~~~~~~kr~--~~sverT~~w~~~~l~~----~~~~~~lf~~iqGg~~~~lR~~ 198 (397)
.+++|.+..+.+. +|.+..- -.+|...+.... .+.+..-++|+++.... +..+-+++.=+-++...+.-.+
T Consensus 151 ~~~~~~~aa~~~~~g~d~iein-~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~ 229 (336)
T 1f76_A 151 GKDDYLICMEKIYAYAGYIAIN-ISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQ 229 (336)
T ss_dssp THHHHHHHHHHHGGGCSEEEEE-CCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHH
T ss_pred cHHHHHHHHHHHhccCCEEEEE-ccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHH
Confidence 4788888776555 8876332 123322111000 22223334444443311 0112345555666666554456
Q ss_pred HHHHHHhcCCceEEEcCccCC---------------Cc----hhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHH
Q 015981 199 CAQEVAVRNVSGYWIGGFGLG---------------ES----MEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVA 258 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~g---------------e~----~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~ 258 (397)
.++.+.+.|++++.+.+-..+ -+ .....+.+..+.+.++.+.|.... |+.++.++..+++
T Consensus 230 ~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~ 309 (336)
T 1f76_A 230 VADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIA 309 (336)
T ss_dssp HHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHH
Confidence 677788899999998754211 01 112245666777777666787654 8889999999999
Q ss_pred cCCcEEecchh
Q 015981 259 AGVDLFDSAYI 269 (397)
Q Consensus 259 ~GvD~FD~~~p 269 (397)
.|+|.+=..-+
T Consensus 310 ~GAd~V~igr~ 320 (336)
T 1f76_A 310 AGASLVQIYSG 320 (336)
T ss_dssp HTCSEEEESHH
T ss_pred CCCCEEEeeHH
Confidence 99998865543
No 16
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=90.66 E-value=2 Score=41.66 Aligned_cols=139 Identities=11% Similarity=0.032 Sum_probs=80.0
Q ss_pred cChhhHHHHHHhc---CCcEEEEcCCCCCCCCCHHHHH---HHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHH
Q 015981 126 IKPVEYMEMITSM---KPNLWATLADEVPAWANNKRNK---TSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRC 199 (397)
Q Consensus 126 ltpe~~~~~q~~i---~pDi~~~L~d~~~~~~~~kr~~---~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~s 199 (397)
-++++|.+..+.+ +.|-++-+.-.||...+..... ..+..-++++++. .+.+++.=+-.+.+...-.+.
T Consensus 138 ~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-----~~~PV~vKi~p~~~~~~~a~~ 212 (345)
T 3oix_A 138 MSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-----FTKPLGIKLPPYFDIVHFDQA 212 (345)
T ss_dssp SSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-----CCSCEEEEECCCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-----hCCCeEEEECCCCCHHHHHHH
Confidence 4799999988887 5662333334555432211111 1222223332211 123466556555666555556
Q ss_pred HHHHHhcCCceEE-----------------------EcCccCCCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHH
Q 015981 200 AQEVAVRNVSGYW-----------------------IGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQ 255 (397)
Q Consensus 200 a~~l~~~~~~G~~-----------------------IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~ 255 (397)
++.....+++++. .||++.....+.-.+.|..+.+.++.+.|.... |+.++.++..
T Consensus 213 ~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~ 292 (345)
T 3oix_A 213 AAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFE 292 (345)
T ss_dssp HHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHH
T ss_pred HHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHH
Confidence 6666555565432 122221111122367888888888877887755 8899999999
Q ss_pred HHHcCCcEEecchh
Q 015981 256 GVAAGVDLFDSAYI 269 (397)
Q Consensus 256 ~v~~GvD~FD~~~p 269 (397)
++..|+|.+-..-+
T Consensus 293 ~l~aGAd~V~igra 306 (345)
T 3oix_A 293 HILCGASMVQIGTA 306 (345)
T ss_dssp HHHHTCSEEEESHH
T ss_pred HHHhCCCEEEEChH
Confidence 99999998765543
No 17
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=90.42 E-value=0.81 Score=44.82 Aligned_cols=95 Identities=12% Similarity=-0.024 Sum_probs=69.7
Q ss_pred eEEee-cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCC--CCcc--ccc-CCC-ChHHHHH
Q 015981 183 VFGSI-VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPK--DWPR--MIC-GLG-LPEEVLQ 255 (397)
Q Consensus 183 lf~~i-qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~--~kpr--~l~-G~g-~P~~il~ 255 (397)
.|+.- .|-.+++.-.+.++.+.+.|.+-+.|.-....-.+.+..++++++.+.+|. +.|. |.+ -.| .....+.
T Consensus 145 ~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~la 224 (370)
T 3rmj_A 145 EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLA 224 (370)
T ss_dssp EEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHH
T ss_pred EEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHH
Confidence 34443 455778888888999999999988887766566778889999999999985 2454 444 233 3678999
Q ss_pred HHHcCCcEEecchhHHhhhcce
Q 015981 256 GVAAGVDLFDSAYIYHLTIGGF 277 (397)
Q Consensus 256 ~v~~GvD~FD~~~p~~~a~~G~ 277 (397)
|+..|+|.||++.--.-.+.|.
T Consensus 225 Av~aGa~~vd~tv~GlGeraGN 246 (370)
T 3rmj_A 225 ALKGGARQVECTVNGLGERAGN 246 (370)
T ss_dssp HHHTTCCEEEEBGGGCSSTTCB
T ss_pred HHHhCCCEEEEeccccCccccc
Confidence 9999999999996443334444
No 18
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=89.51 E-value=0.26 Score=47.53 Aligned_cols=87 Identities=13% Similarity=-0.015 Sum_probs=66.2
Q ss_pred eEEee-cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCC--CCcc--ccc-CCC-ChHHHHH
Q 015981 183 VFGSI-VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPK--DWPR--MIC-GLG-LPEEVLQ 255 (397)
Q Consensus 183 lf~~i-qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~--~kpr--~l~-G~g-~P~~il~ 255 (397)
.|+.- .|-.+++.-.+.++.+.+.|++-+.|.-....-.+.+..++++++.+.+|. +.|. |.+ -.| .....+.
T Consensus 139 ~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~la 218 (325)
T 3eeg_A 139 EFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLA 218 (325)
T ss_dssp EEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHH
T ss_pred EEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHH
Confidence 44433 445678888888999999999988887766566778889999999999984 2454 443 233 3678999
Q ss_pred HHHcCCcEEecchh
Q 015981 256 GVAAGVDLFDSAYI 269 (397)
Q Consensus 256 ~v~~GvD~FD~~~p 269 (397)
|+..|+|.||++.-
T Consensus 219 A~~aGa~~vd~tv~ 232 (325)
T 3eeg_A 219 ALQNGARQVECTIN 232 (325)
T ss_dssp HHHHTCCEEEEBGG
T ss_pred HHHhCCCEEEEecc
Confidence 99999999999964
No 19
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=88.66 E-value=7.8 Score=41.18 Aligned_cols=87 Identities=18% Similarity=0.112 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEec
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~ 266 (397)
++.+.-.+.++.+.+.|.+-+.|.-....-.+.+..++|+++.+.+| +.|..++ -.| .....+.|++.|+|.||+
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p-~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ 336 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFP-DLPLHIHTHDTSGAGVAAMLACAQAGADVVDV 336 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHST-TCCEEEECCCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCccHHHHHHHHHHHhCCCEEEe
Confidence 46788888899999999999988876656677888999999999998 6776544 233 377899999999999999
Q ss_pred chhHHhhhccee
Q 015981 267 AYIYHLTIGGFA 278 (397)
Q Consensus 267 ~~p~~~a~~G~a 278 (397)
+.--.-.+.|.+
T Consensus 337 ti~GlGertGN~ 348 (718)
T 3bg3_A 337 AADSMSGMTSQP 348 (718)
T ss_dssp BCGGGCSTTSCC
T ss_pred cCcccccccCch
Confidence 965433344443
No 20
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.46 E-value=1.2 Score=42.35 Aligned_cols=80 Identities=16% Similarity=0.248 Sum_probs=60.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHH----HHHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVL----QGVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il----~~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|-. || +.+|+.++++.+.+......|. +.|+|+ ..+.+ .+.+
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-GE~~~Ls~~Er~~v~~~~~~~~~gr~pv-iaGvg~~~t~~ai~la~~A~~ 107 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSN-GEFPFLTSSERLEVVSRVRQAMPKNRLL-LAGSGCESTQATVEMTVSMAQ 107 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGG-GTGGGSCHHHHHHHHHHHHHTSCTTSEE-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccc-cchhhCCHHHHHHHHHHHHHHcCCCCcE-EEecCCCCHHHHHHHHHHHHH
Confidence 67788877888888899999999998853 55 4578999999999988766665 457774 44433 4457
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 108 ~Gadavlv~~P~ 119 (307)
T 3s5o_A 108 VGADAAMVVTPC 119 (307)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 999977776554
No 21
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=88.27 E-value=5.5 Score=39.52 Aligned_cols=140 Identities=15% Similarity=0.158 Sum_probs=83.5
Q ss_pred hhhHHHHHHhcC--CcEEEEcCCCCCCCCCHH--HHHHHHHHHHHHHHHHHH----hC-----------CCCCC-eEEee
Q 015981 128 PVEYMEMITSMK--PNLWATLADEVPAWANNK--RNKTSVDRTVKWLDECIA----RS-----------PAGGA-VFGSI 187 (397)
Q Consensus 128 pe~~~~~q~~i~--pDi~~~L~d~~~~~~~~k--r~~~sverT~~w~~~~l~----~~-----------~~~~~-lf~~i 187 (397)
+++|.+..+.+. +|++..- -.||...+.. .-...++.-++++++..+ .+ ....+ ++.=|
T Consensus 198 ~~Dy~~~a~~l~~~ad~ieiN-iScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi 276 (415)
T 3i65_A 198 VDDLKYCINKIGRYADYIAIN-VSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKL 276 (415)
T ss_dssp HHHHHHHHHHHGGGCSEEEEE-CCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEE
T ss_pred HHHHHHHHHHHHhhCCEEEEE-CCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEe
Confidence 688988888776 5776442 3444332211 011222223333333221 00 11234 56667
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccC----------------CCc-hhhHHHHHHHHHcCCCCCCccccc-CCCC
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGL----------------GES-MEERPSLLNAVTDNLPKDWPRMIC-GLGL 249 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~----------------ge~-~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~ 249 (397)
-.+.+.+.-.+.++.+.+.+++|+.+.+-.. |.. ...-.++|..+.+.++.+.|.+.. |+.+
T Consensus 277 ~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s 356 (415)
T 3i65_A 277 APDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFS 356 (415)
T ss_dssp CSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCS
T ss_pred cCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 7777765556677777788999998775321 111 112246777777888767887755 8899
Q ss_pred hHHHHHHHHcCCcEEecch
Q 015981 250 PEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 250 P~~il~~v~~GvD~FD~~~ 268 (397)
+.++..++..|+|.+-..-
T Consensus 357 ~eDa~e~l~aGAd~VqIgr 375 (415)
T 3i65_A 357 GLDALEKIEAGASVCQLYS 375 (415)
T ss_dssp HHHHHHHHHHTEEEEEESH
T ss_pred HHHHHHHHHcCCCEEEEcH
Confidence 9999999999999876553
No 22
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=88.26 E-value=1.2 Score=42.35 Aligned_cols=80 Identities=23% Similarity=0.352 Sum_probs=58.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-+
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~Ls~eEr~~v~~~~~~~~~grvp-ViaGvg~~~t~~ai~la~~A~~ 105 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGT-TGESPTLTSEEKVALYRHVVSVVDKRVP-VIAGTGSNNTHASIDLTKKATE 105 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCce-EEeCCCCCCHHHHHHHHHHHHh
Confidence 6788888788888888899999999884 455 447888999888877665455 4578885 444433 456
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=.+-|+
T Consensus 106 ~Gadavlv~~P~ 117 (301)
T 1xky_A 106 VGVDAVMLVAPY 117 (301)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 899977766554
No 23
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=87.75 E-value=1.1 Score=42.37 Aligned_cols=80 Identities=23% Similarity=0.280 Sum_probs=60.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+|+ ..+.+. +-+
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~gr~pv-iaGvg~~~t~~ai~la~~a~~ 94 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGT-TGEASTLSMEEHTQVIKEIIRVANKRIPI-IAGTGANSTREAIELTKAAKD 94 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSCE-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECcc-ccccccCCHHHHHHHHHHHHHHhCCCCeE-EEeCCCCCHHHHHHHHHHHHh
Confidence 6788888888888888999999999884 476 5688999999888877655554 558874 555444 457
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 95 ~Gadavlv~~P~ 106 (291)
T 3tak_A 95 LGADAALLVTPY 106 (291)
T ss_dssp HTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 999977666553
No 24
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.68 E-value=1.2 Score=42.30 Aligned_cols=80 Identities=23% Similarity=0.360 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-+
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~st~~ai~la~~A~~ 109 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGT-TGESPTTTAAEKLELLKAVREEVGDRAK-LIAGVGTNNTRTSVELAEAAAS 109 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESST-TTTTTTSCHHHHHHHHHHHHHHHTTTSE-EEEECCCSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCc-EEecCCCCCHHHHHHHHHHHHh
Confidence 6678877777888888899999999884 355 457888999888877765555 4678875 444433 456
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 110 ~Gadavlv~~P~ 121 (304)
T 3cpr_A 110 AGADGLLVVTPY 121 (304)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 899977666553
No 25
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=87.45 E-value=1.7 Score=40.86 Aligned_cols=77 Identities=23% Similarity=0.327 Sum_probs=56.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+.... .+.|+|+ ..+.+. +-+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~Ls~eEr~~v~~~~~~~~~g----ViaGvg~~~t~~ai~la~~A~~ 89 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGT-TGLGPALSKDEKRQNLNALYDVTHK----LIFQVGSLNLNDVMELVKFSNE 89 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETST-TTTGGGSCHHHHHHHHHHHTTTCSC----EEEECCCSCHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCC----eEEeeCCCCHHHHHHHHHHHHh
Confidence 6778887778888888899999999884 465 447889999988887654 6678885 344433 346
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 90 ~Gadavlv~~P~ 101 (288)
T 2nuw_A 90 MDILGVSSHSPY 101 (288)
T ss_dssp SCCSEEEECCCC
T ss_pred cCCCEEEEcCCc
Confidence 899977666553
No 26
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=87.42 E-value=1.5 Score=41.45 Aligned_cols=80 Identities=18% Similarity=0.142 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-+
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGT-TGEGCSVGSRERQAILSSFIAAGIAPSR-IVTGVLVDSIEDAADQSAEALN 96 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESST-TTTGGGSCHHHHHHHHHHHHHTTCCGGG-EEEEECCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCccHHHHHHHHHHHHh
Confidence 6778887778888888899999999884 455 447889999999988765455 4567775 444443 446
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 97 ~Gadavlv~~P~ 108 (294)
T 3b4u_A 97 AGARNILLAPPS 108 (294)
T ss_dssp TTCSEEEECCCC
T ss_pred cCCCEEEEcCCc
Confidence 899977666443
No 27
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.24 E-value=1.2 Score=42.18 Aligned_cols=80 Identities=23% Similarity=0.341 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-+
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~eEr~~v~~~~~~~~~grvp-ViaGvg~~~t~~ai~la~~A~~ 104 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGS-TGEAFVQSLSEREQVLEIVAEEAKGKIK-LIAHVGCVSTAESQQLAASAKR 104 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTTSE-EEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECee-ccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHHh
Confidence 7788887778888888899999999884 465 447888999988877665445 4668885 444433 346
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 105 ~Gadavlv~~P~ 116 (303)
T 2wkj_A 105 YGFDAVSAVTPF 116 (303)
T ss_dssp HTCSEEEEECCC
T ss_pred CCCCEEEecCCC
Confidence 899977666553
No 28
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=87.08 E-value=1.6 Score=41.29 Aligned_cols=80 Identities=28% Similarity=0.336 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+|+ ..+.+. +.+
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvpv-iaGvg~~~t~~ai~la~~a~~ 100 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGT-TGESATLSVEEHTAVIEAVVKHVAKRVPV-IAGTGANNTVEAIALSQAAEK 100 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSCE-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCcc-ccCcccCCHHHHHHHHHHHHHHhCCCCcE-EEeCCCcCHHHHHHHHHHHHH
Confidence 7788888888889999999999999884 466 5588899999888877655554 558884 444443 457
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 101 ~Gadavlv~~P~ 112 (297)
T 3flu_A 101 AGADYTLSVVPY 112 (297)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 999977666553
No 29
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=87.07 E-value=1.2 Score=42.19 Aligned_cols=80 Identities=23% Similarity=0.272 Sum_probs=59.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCC--ChHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLG--LPEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g--~P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+| +..+.+. +-+
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~Gt-tGE~~~Lt~~Er~~v~~~~~~~~~grvpv-iaGvg~~~t~~ai~la~~a~~ 108 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGT-TGESPTTTDGEKIELLRAVLEAVGDRARV-IAGAGTYDTAHSIRLAKACAA 108 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTTSEE-EEECCCSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCcc-ccchhhCCHHHHHHHHHHHHHHhCCCCeE-EEeCCCCCHHHHHHHHHHHHH
Confidence 7788888888889999999999999884 466 5588899999888877654554 55787 3444443 446
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 109 ~Gadavlv~~P~ 120 (304)
T 3l21_A 109 EGAHGLLVVTPY 120 (304)
T ss_dssp HTCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 899977666554
No 30
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=86.81 E-value=1.5 Score=41.96 Aligned_cols=80 Identities=20% Similarity=0.270 Sum_probs=60.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+|+ ..+.+. +-+
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~Gt-TGE~~~Ls~~Er~~v~~~~v~~~~grvpV-iaGvg~~st~~ai~la~~A~~ 115 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGT-TGESPTLTHEEHKRIIELCVEQVAKRVPV-VAGAGSNSTSEAVELAKHAEK 115 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSST-TTTGGGSCHHHHHHHHHHHHHHHTTSSCB-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCcc-ccCccccCHHHHHHHHHHHHHHhCCCCcE-EEeCCCCCHHHHHHHHHHHHh
Confidence 7788888888899999999999999884 466 4578899999888877655554 558884 555443 457
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 116 ~Gadavlv~~P~ 127 (315)
T 3si9_A 116 AGADAVLVVTPY 127 (315)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 999977666553
No 31
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=86.51 E-value=1.4 Score=41.55 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
| .|.+.-++-++.+.+.|++|+.+.|-. || +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-+
T Consensus 18 g-iD~~~l~~lv~~li~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~p-vi~Gvg~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 18 G-VDFDKLSELIEWHIKSKTDAIIVCGTT-GEATTMTETERKETIKFVIDKVNKRIP-VIAGTGSNNTAASIAMSKWAES 94 (291)
T ss_dssp S-BCHHHHHHHHHHHHHTTCCEEEESSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHHHH
T ss_pred C-cCHHHHHHHHHHHHHcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCcccHHHHHHHHHHHHh
Confidence 6 888888888888888999999998853 55 447888999888877665555 4678885 444433 456
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 95 ~Gadavlv~~P~ 106 (291)
T 3a5f_A 95 IGVDGLLVITPY 106 (291)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 899977666554
No 32
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=86.35 E-value=1.3 Score=42.09 Aligned_cols=81 Identities=16% Similarity=0.223 Sum_probs=59.9
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHH----HHH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVL----QGV 257 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il----~~v 257 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+ .+-
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILAN-FSEQFAITDDERDVLTRTILEHVAGRVP-VIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccCcccCCHHHHHHHHHHHHHHhCCCCc-EEEecCCchHHHHHHHHHHHH
Confidence 37788888888888999999999999884 466 558889999988887754445 4667774 44444 345
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=..-|+
T Consensus 101 ~~Gadavlv~~Py 113 (309)
T 3fkr_A 101 QLGAAMVMAMPPY 113 (309)
T ss_dssp HTTCSEEEECCSC
T ss_pred HcCCCEEEEcCCC
Confidence 7999987776554
No 33
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=86.30 E-value=1.3 Score=41.75 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=59.3
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GV 257 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v 257 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +.
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGT-TGESPTLTFEEHEKVIEFAVKRAAGRIK-VIAGTGGNATHEAVHLTAHAK 92 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHH
Confidence 57788888888888899999999999884 455 447888999988877665455 4578875 444433 45
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=..-|+
T Consensus 93 ~~Gadavlv~~P~ 105 (294)
T 2ehh_A 93 EVGADGALVVVPY 105 (294)
T ss_dssp HTTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 6899977666553
No 34
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=85.92 E-value=1.9 Score=40.61 Aligned_cols=77 Identities=22% Similarity=0.207 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHHH----HH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQG----VA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~~----v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+.... .+.|+|+ ..+.+.. -+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~eEr~~v~~~~~~~~~g----viaGvg~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGT-TGLGPSLSPEEKLENLKAVYDVTNK----IIFQVGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHTTCSC----EEEECCCSCHHHHHHHHHHGGG
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHcCC----EEEecCCCCHHHHHHHHHHHHh
Confidence 6678887777888888899999999884 455 447889999988888654 6678885 4444443 35
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 90 ~Gadavlv~~P~ 101 (293)
T 1w3i_A 90 FDIVGIASYAPY 101 (293)
T ss_dssp SCCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 899977666453
No 35
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.77 E-value=1.9 Score=41.11 Aligned_cols=78 Identities=19% Similarity=0.146 Sum_probs=57.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+.. ...| .+.|+|+ ..+.+. +-+
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Lt~~Er~~v~~~~v~~~-grvp-ViaGvg~~~t~~ai~la~~A~~ 100 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGI-LGEAPKLDAAEAEAVATRFIKRA-KSMQ-VIVGVSAPGFAAMRRLARLSMD 100 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTG-GGTGGGSCHHHHHHHHHHHHHHC-TTSE-EEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCcc-CcChhhCCHHHHHHHHHHHHHHc-CCCc-EEEecCCCCHHHHHHHHHHHHH
Confidence 6788888888888999999999999884 465 5578899999998888 5455 4568874 444443 446
Q ss_pred cCCcEEecchh
Q 015981 259 AGVDLFDSAYI 269 (397)
Q Consensus 259 ~GvD~FD~~~p 269 (397)
.|+|-+=..-|
T Consensus 101 ~Gadavlv~~P 111 (313)
T 3dz1_A 101 AGAAGVMIAPP 111 (313)
T ss_dssp HTCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 89997666544
No 36
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=85.66 E-value=1.5 Score=41.41 Aligned_cols=80 Identities=21% Similarity=0.367 Sum_probs=58.3
Q ss_pred CCCCHHHHHHHHHHHHh-cCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HH
Q 015981 189 GGSNIEERKRCAQEVAV-RNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GV 257 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~-~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v 257 (397)
|..|.+.-++-++.+.+ .|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~a~ 96 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGS-TGENFMLSTEEKKEIFRIAKDEAKDQIA-LIAQVGSVNLKEAVELGKYAT 96 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEECCCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCcc-ccchhhCCHHHHHHHHHHHHHHhCCCCe-EEEecCCCCHHHHHHHHHHHH
Confidence 77888877788888888 99999999884 355 457888999988877665455 4578875 344433 45
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=..-|+
T Consensus 97 ~~Gadavlv~~P~ 109 (293)
T 1f6k_A 97 ELGYDCLSAVTPF 109 (293)
T ss_dssp HHTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 6899977666553
No 37
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=85.63 E-value=1.8 Score=40.57 Aligned_cols=78 Identities=19% Similarity=0.274 Sum_probs=57.7
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GV 257 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v 257 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+.... .+.|+|+ ..+.+. +-
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~g----vi~Gvg~~~t~~ai~la~~A~ 87 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGT-TGLGPALSLQEKMELTDAATSAARR----VIVQVASLNADEAIALAKYAE 87 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETST-TTTGGGSCHHHHHHHHHHHHHHCSS----EEEECCCSSHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCC----EEEeeCCCCHHHHHHHHHHHH
Confidence 56778887778888888899999999884 465 447889999988887654 6778885 344333 45
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=..-|+
T Consensus 88 ~~Gadavlv~~P~ 100 (286)
T 2r91_A 88 SRGAEAVASLPPY 100 (286)
T ss_dssp HTTCSEEEECCSC
T ss_pred hcCCCEEEEcCCc
Confidence 6899977666554
No 38
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.48 E-value=1.4 Score=41.53 Aligned_cols=81 Identities=25% Similarity=0.268 Sum_probs=59.0
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GV 257 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v 257 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~a~ 92 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGT-TGESPTLSHEEHKKVIEKVVDVVNGRVQ-VIAGAGSNCTEEAIELSVFAE 92 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCCCHHHHHHHHHHHH
Confidence 57788888888888888899999999884 465 447888999988877665455 4578875 344333 45
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=..-|+
T Consensus 93 ~~Gadavlv~~P~ 105 (289)
T 2yxg_A 93 DVGADAVLSITPY 105 (289)
T ss_dssp HHTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 6899977666554
No 39
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=85.43 E-value=1.5 Score=41.81 Aligned_cols=80 Identities=20% Similarity=0.244 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+|+ ..+.+. +-+
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~~Er~~v~~~~v~~~~grvpV-iaGvg~~st~eai~la~~A~~ 116 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGT-TGESATLDVEEHIQVIRRVVDQVKGRIPV-IAGTGANSTREAVALTEAAKS 116 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSG-GGTGGGCCHHHHHHHHHHHHHHHTTSSCE-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcE-EEeCCCcCHHHHHHHHHHHHH
Confidence 6678888888888888899999999884 466 5588899999888877655554 558874 555444 447
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 117 ~Gadavlv~~P~ 128 (314)
T 3qze_A 117 GGADACLLVTPY 128 (314)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 999977666553
No 40
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=85.31 E-value=1.9 Score=42.00 Aligned_cols=79 Identities=19% Similarity=0.216 Sum_probs=57.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHHH----HH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQG----VA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~~----v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.| +.|| +.+|+.++++.+.+......|. +.|+|+ ..+.+.+ .+
T Consensus 75 g~ID~~al~~lv~~li~~Gv~Gl~v~G-TTGE~~~Ls~eEr~~vi~~~ve~~~grvpV-iaGvg~~st~eai~la~~A~~ 152 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQNGAEGVIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGGSIKV-IGNTGSNSTREAIHATEQGFA 152 (360)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEE-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEecc-cccChhhCCHHHHHHHHHHHHHHhCCCCeE-EEecCCCCHHHHHHHHHHHHH
Confidence 667877777888888889999999988 4466 4578888998888877654454 568874 5555544 45
Q ss_pred cCCcEEecchh
Q 015981 259 AGVDLFDSAYI 269 (397)
Q Consensus 259 ~GvD~FD~~~p 269 (397)
.|+|-+=..-|
T Consensus 153 ~Gadavlvv~P 163 (360)
T 4dpp_A 153 VGMHAALHINP 163 (360)
T ss_dssp TTCSEEEEECC
T ss_pred cCCCEEEEcCC
Confidence 89997766644
No 41
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=85.18 E-value=1.4 Score=41.78 Aligned_cols=81 Identities=17% Similarity=0.171 Sum_probs=60.9
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCC-CCcccccCCCC--hHHHHH----H
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPK-DWPRMICGLGL--PEEVLQ----G 256 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~-~kpr~l~G~g~--P~~il~----~ 256 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+.... ..|. +.|+|+ ..+.+. +
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpv-iaGvg~~~t~~ai~la~~a 99 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGT-TGESATLTHEEHRTCIEIAVETCKGTKVKV-LAGAGSNATHEAVGLAKFA 99 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSST-TTTGGGSCHHHHHHHHHHHHHHHTTSSCEE-EEECCCSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCCeE-EEeCCCCCHHHHHHHHHHH
Confidence 57788888888899999999999999884 466 558889999988888765 4554 558884 555444 4
Q ss_pred HHcCCcEEecchhH
Q 015981 257 VAAGVDLFDSAYIY 270 (397)
Q Consensus 257 v~~GvD~FD~~~p~ 270 (397)
-+.|+|-+=..-|+
T Consensus 100 ~~~Gadavlv~~P~ 113 (301)
T 3m5v_A 100 KEHGADGILSVAPY 113 (301)
T ss_dssp HHTTCSEEEEECCC
T ss_pred HHcCCCEEEEcCCC
Confidence 46999977766553
No 42
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=85.13 E-value=1.4 Score=42.48 Aligned_cols=80 Identities=25% Similarity=0.285 Sum_probs=55.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +.+
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~eEr~~vi~~~ve~~~grvp-ViaGvg~~st~eai~la~~A~~ 127 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGS-TGIYMYLTREERRRAIEAAATILRGRRT-LMAGIGALRTDEAVALAKDAEA 127 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEEECCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHHh
Confidence 5567777677778888889999998884 455 447888899888877765455 4557775 444433 456
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=.+-|+
T Consensus 128 ~Gadavlv~~P~ 139 (332)
T 2r8w_A 128 AGADALLLAPVS 139 (332)
T ss_dssp HTCSEEEECCCC
T ss_pred cCCCEEEECCCC
Confidence 899977666453
No 43
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=85.09 E-value=1.7 Score=41.49 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=59.3
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCC--ChHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLG--LPEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g--~P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+| +..+.+. +-+
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~Gt-TGE~~~Ls~~Er~~v~~~~v~~~~grvpV-iaGvg~~~t~~ai~la~~A~~ 117 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGS-TGEGAYLSDPEWDEVVDFTLKTVAHRVPT-IVSVSDLTTAKTVRRAQFAES 117 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSCB-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcE-EEecCCCCHHHHHHHHHHHHh
Confidence 6678888888888888999999999884 465 5578899999888877655555 55887 4444443 457
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 118 ~Gadavlv~~P~ 129 (315)
T 3na8_A 118 LGAEAVMVLPIS 129 (315)
T ss_dssp TTCSEEEECCCC
T ss_pred cCCCEEEECCCC
Confidence 999977766554
No 44
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=85.04 E-value=1.8 Score=41.85 Aligned_cols=80 Identities=23% Similarity=0.315 Sum_probs=57.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +.+
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~eEr~~vi~~~ve~~~grvp-ViaGvg~~st~eai~la~~A~~ 124 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGS-GGEFSQLGAEERKAIARFAIDHVDRRVP-VLIGTGGTNARETIELSQHAQQ 124 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCSSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCcc-ccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHHh
Confidence 6678877777888888899999999884 455 447888999888877665455 4578884 444443 446
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=.+-|+
T Consensus 125 ~Gadavlv~~P~ 136 (343)
T 2v9d_A 125 AGADGIVVINPY 136 (343)
T ss_dssp HTCSEEEEECCS
T ss_pred cCCCEEEECCCC
Confidence 899977666554
No 45
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=84.79 E-value=1.3 Score=41.85 Aligned_cols=81 Identities=22% Similarity=0.243 Sum_probs=58.5
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GV 257 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v 257 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gi~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 15 NGQVDEKALAGLVDWQIKHGAHGLVPVGT-TGESPTLTEEEHKRVVALVAEQAQGRVP-VIAGAGSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEECSSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSC-BEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccchhhCCHHHHHHHHHHHHHHhCCCCe-EEEccCCCCHHHHHHHHHHHH
Confidence 46788887788888888899999999884 355 447888999888877665455 4578875 344333 45
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=.+-|+
T Consensus 93 ~~Gadavlv~~P~ 105 (297)
T 2rfg_A 93 QAGADAVLCVAGY 105 (297)
T ss_dssp HHTCSEEEECCCT
T ss_pred hcCCCEEEEcCCC
Confidence 6899977666554
No 46
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=84.68 E-value=10 Score=36.24 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=73.6
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHhCCCCCCeEE-eecCCCCHHHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWAN--NKRNKTSVDRTVKWLDECIARSPAGGAVFG-SIVGGSNIEERKRCAQE 202 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~--~kr~~~sverT~~w~~~~l~~~~~~~~lf~-~iqGg~~~~lR~~sa~~ 202 (397)
.+++...+..+..++|.+..--++...... .+.....+...++|+.+.. +.+++. .+..+.+. +-++.
T Consensus 127 ~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~-----~~Pv~vK~~~~~~~~----~~a~~ 197 (349)
T 1p0k_A 127 ATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV-----SVPVIVKEVGFGMSK----ASAGK 197 (349)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC-----SSCEEEEEESSCCCH----HHHHH
T ss_pred CCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc-----CCCEEEEecCCCCCH----HHHHH
Confidence 567888888889999987443233211100 0000001233444554321 123332 23334453 33566
Q ss_pred HHhcCCceEEEcCccCC--------Cc----------hhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcE
Q 015981 203 VAVRNVSGYWIGGFGLG--------ES----------MEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDL 263 (397)
Q Consensus 203 l~~~~~~G~~IgGl~~g--------e~----------~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~ 263 (397)
+.+.|++|+.+.|-+.. .. .....+.|..+.+.+ .+.|.+. -|+.+|.++..++.+|+|.
T Consensus 198 a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~ 276 (349)
T 1p0k_A 198 LYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASC 276 (349)
T ss_dssp HHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCE
Confidence 67789999998542110 00 001233455555555 3577664 4899999999999999998
Q ss_pred EecchhH
Q 015981 264 FDSAYIY 270 (397)
Q Consensus 264 FD~~~p~ 270 (397)
+=..-|.
T Consensus 277 V~iG~~~ 283 (349)
T 1p0k_A 277 TGMAGHF 283 (349)
T ss_dssp EEECHHH
T ss_pred EEEcHHH
Confidence 8766554
No 47
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=84.64 E-value=1.3 Score=41.83 Aligned_cols=81 Identities=19% Similarity=0.133 Sum_probs=58.8
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHH----HHH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVL----QGV 257 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il----~~v 257 (397)
.|..|.+.-++-++.+.+.|++|+.+.|-. || +.+|+.++++.+.+......| .+.|+|+ ..+.+ .+-
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~A~ 92 (292)
T 2vc6_A 15 DDRIDEVALHDLVEWQIEEGSFGLVPCGTT-GESPTLSKSEHEQVVEITIKTANGRVP-VIAGAGSNSTAEAIAFVRHAQ 92 (292)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEETTSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSC-BEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCccHHHHHHHHHHHH
Confidence 467888888888888888999999998843 55 447888999888877665455 4568875 34433 345
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=..-|+
T Consensus 93 ~~Gadavlv~~P~ 105 (292)
T 2vc6_A 93 NAGADGVLIVSPY 105 (292)
T ss_dssp HTTCSEEEEECCC
T ss_pred HcCCCEEEEcCCC
Confidence 6899977666553
No 48
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=84.31 E-value=7.2 Score=37.77 Aligned_cols=134 Identities=15% Similarity=0.101 Sum_probs=78.2
Q ss_pred ChhhHHHHHHhcC------CcEEEEcCCCCCCCCCHHHH---HHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHH
Q 015981 127 KPVEYMEMITSMK------PNLWATLADEVPAWANNKRN---KTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERK 197 (397)
Q Consensus 127 tpe~~~~~q~~i~------pDi~~~L~d~~~~~~~~kr~---~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~ 197 (397)
++++|.+..+.+. +|.+.. .-.||...+.... ...+.+-++++++.. +.+++.=+-.+.+.+.-.
T Consensus 137 ~~~d~~~~a~~l~~~~~~g~d~iel-NisCPn~~gg~~l~~~~e~~~~il~av~~~~-----~~PV~vKi~p~~d~~~~~ 210 (354)
T 4ef8_A 137 SMRENVEMCKRLAAVATEKGVILEL-NLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY-----PHSFGVKMPPYFDFAHFD 210 (354)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEE-ECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC-----CSCEEEEECCCCSHHHHH
T ss_pred CHHHHHHHHHHHhhhhhcCCCEEEE-eCCCCCCCCchhhccCHHHHHHHHHHHHHhh-----CCCeEEEecCCCCHHHHH
Confidence 6899998887766 576643 2345443211111 122344444554431 134665565566665555
Q ss_pred HHHHHHHhcC-CceEEE-------------------------cCccCCCch-hhHHHHHHHHHcCCCCCCccccc-CCCC
Q 015981 198 RCAQEVAVRN-VSGYWI-------------------------GGFGLGESM-EERPSLLNAVTDNLPKDWPRMIC-GLGL 249 (397)
Q Consensus 198 ~sa~~l~~~~-~~G~~I-------------------------gGl~~ge~~-~~~~~~v~~~~~~Lp~~kpr~l~-G~g~ 249 (397)
+.++.+.+.+ ++|+.+ ||++ |... ..-.++|..+.+..+ +.|.... |+.+
T Consensus 211 ~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlS-G~~i~p~a~~~i~~v~~~~~-~ipII~~GGI~s 288 (354)
T 4ef8_A 211 AAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG-GRYVLPTALANINAFYRRCP-GKLIFGCGGVYT 288 (354)
T ss_dssp HHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-GGGGHHHHHHHHHHHHHHCT-TSEEEEESCCCS
T ss_pred HHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCC-CCCCchHHHHHHHHHHHhCC-CCCEEEECCcCC
Confidence 6666666776 888764 1221 1111 223566777766643 4676644 8889
Q ss_pred hHHHHHHHHcCCcEEecch
Q 015981 250 PEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 250 P~~il~~v~~GvD~FD~~~ 268 (397)
+.|+..++..|+|.+-..-
T Consensus 289 ~~da~~~l~aGAd~V~vgr 307 (354)
T 4ef8_A 289 GEDAFLHVLAGASMVQVGT 307 (354)
T ss_dssp HHHHHHHHHHTEEEEEECH
T ss_pred HHHHHHHHHcCCCEEEEhH
Confidence 9999999999999876553
No 49
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=84.20 E-value=1.5 Score=41.66 Aligned_cols=81 Identities=22% Similarity=0.291 Sum_probs=59.0
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GV 257 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v 257 (397)
.|..|.+.-++-++.+.+.|++|+.+.|-. || +.+|+.++++.+.+......| .+.|+|+ ..+.+. +-
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-GE~~~Ls~eEr~~vi~~~~~~~~grvp-ViaGvg~~st~~ai~la~~A~ 104 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTT-GESPTVNEDEREKLVSRTLEIVDGKIP-VIVGAGTNSTEKTLKLVKQAE 104 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGG-GTGGGCCHHHHHHHHHHHHHHHTTSSC-EEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccc-cchhhCCHHHHHHHHHHHHHHhCCCCe-EEEcCCCccHHHHHHHHHHHH
Confidence 577888888888888888999999998853 55 447888999888877665445 4578885 444433 45
Q ss_pred HcCCcEEecchhH
Q 015981 258 AAGVDLFDSAYIY 270 (397)
Q Consensus 258 ~~GvD~FD~~~p~ 270 (397)
+.|+|-+=.+-|+
T Consensus 105 ~~Gadavlv~~P~ 117 (306)
T 1o5k_A 105 KLGANGVLVVTPY 117 (306)
T ss_dssp HHTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 6899977666553
No 50
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=84.17 E-value=1.5 Score=41.40 Aligned_cols=80 Identities=19% Similarity=0.164 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHHH----HH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQG----VA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~~----v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......| .+.|+|+ ..+.+.. -+
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~a~~ 94 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGT-TGESATLNHDEHADVVMMTLDLADGRIP-VIAGTGANATAEAISLTQRFND 94 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHTTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccchhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCccHHHHHHHHHHHHh
Confidence 6778887778888888889999999884 455 447888999888877665455 4578875 4555443 35
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 95 ~Gadavlv~~P~ 106 (292)
T 2ojp_A 95 SGIVGCLTVTPY 106 (292)
T ss_dssp SSCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 899977666553
No 51
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=83.45 E-value=3.1 Score=40.74 Aligned_cols=145 Identities=11% Similarity=-0.008 Sum_probs=86.3
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecC-CCCHHHHHHHH
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPA------WANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVG-GSNIEERKRCA 200 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~------~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqG-g~~~~lR~~sa 200 (397)
+++ ++.....|.|++-.+ +.+.. ..+.++..+.+..+.+++++. .......|..--+ -.+.+.-.+.+
T Consensus 77 ~~d-i~~a~~~g~~~v~i~-~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~---g~~~~v~~~~ed~~~~~~~~~~~~~ 151 (382)
T 2ztj_A 77 LDA-AKVAVETGVQGIDLL-FGTSKYLRAPHGRDIPRIIEEAKEVIAYIREA---APHVEVRFSAEDTFRSEEQDLLAVY 151 (382)
T ss_dssp HHH-HHHHHHTTCSEEEEE-ECC--------CCCHHHHHHHHHHHHHHHHHH---CTTSEEEEEETTTTTSCHHHHHHHH
T ss_pred hhh-HHHHHHcCCCEEEEE-eccCHHHHHHhCCCHHHHHHHHHHHHHHHHHc---CCCEEEEEEEEeCCCCCHHHHHHHH
Confidence 444 344445688876544 22221 124445555566666666543 1000112222222 34667777888
Q ss_pred HHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcc--ccc-CCC-ChHHHHHHHHcCCcEEecchhHHhhhcc
Q 015981 201 QEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPR--MIC-GLG-LPEEVLQGVAAGVDLFDSAYIYHLTIGG 276 (397)
Q Consensus 201 ~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr--~l~-G~g-~P~~il~~v~~GvD~FD~~~p~~~a~~G 276 (397)
+.+.+. .+-+.|.-....-.+.+..++++.+.+.++.+.|. |.+ -.| .....+.|+..|+|.||++.--.-.+.|
T Consensus 152 ~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraG 230 (382)
T 2ztj_A 152 EAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGERNG 230 (382)
T ss_dssp HHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTC
T ss_pred HHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEcccccccccc
Confidence 888888 88888876555566788889998888765334565 333 233 3678899999999999999643333444
Q ss_pred ee
Q 015981 277 FA 278 (397)
Q Consensus 277 ~a 278 (397)
.+
T Consensus 231 N~ 232 (382)
T 2ztj_A 231 IT 232 (382)
T ss_dssp BC
T ss_pred ch
Confidence 43
No 52
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=81.87 E-value=2.4 Score=40.43 Aligned_cols=79 Identities=23% Similarity=0.343 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHH----HHHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVL----QGVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il----~~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|-. || +.+|+.++++.+.+......|. +.|+|+ ..+.+ .+-+
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtT-GE~~~Ls~~Er~~v~~~~~~~~~grvpv-iaGvg~~~t~~ai~la~~a~~ 104 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTN-AEAFLLTREERAQLIATARKAVGPDFPI-MAGVGAHSTRQVLEHINDASV 104 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGG-GTGGGSCHHHHHHHHHHHHHHHCTTSCE-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccc-cChhhCCHHHHHHHHHHHHHHhCCCCcE-EEeCCCCCHHHHHHHHHHHHH
Confidence 66788888888889999999999998854 55 4578889999888877655564 558874 44444 3446
Q ss_pred cCCcEEecchh
Q 015981 259 AGVDLFDSAYI 269 (397)
Q Consensus 259 ~GvD~FD~~~p 269 (397)
.|+|-+=..-|
T Consensus 105 ~Gadavlv~~P 115 (318)
T 3qfe_A 105 AGANYVLVLPP 115 (318)
T ss_dssp HTCSEEEECCC
T ss_pred cCCCEEEEeCC
Confidence 89997776666
No 53
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=81.63 E-value=5.2 Score=37.63 Aligned_cols=136 Identities=13% Similarity=0.028 Sum_probs=78.5
Q ss_pred cChhhHHHHHHhc---CCc---EE-EEcCCCCCCCCC---HHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHH
Q 015981 126 IKPVEYMEMITSM---KPN---LW-ATLADEVPAWAN---NKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEE 195 (397)
Q Consensus 126 ltpe~~~~~q~~i---~pD---i~-~~L~d~~~~~~~---~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~l 195 (397)
.++++|.+..+.+ |.| ++ +.+ .+|.... .-.-...+..-++++++..+ -+++.=+-++.+.+.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~--~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~-----~Pv~vK~~~~~~~~~ 175 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNL--SCPNVPGKPQVAYDFEAMRTYLQQVSLAYG-----LPFGVKMPPYFDIAH 175 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEEC--CCCCSTTCCCGGGSHHHHHHHHHHHHHHHC-----SCEEEEECCCCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEc--CCCCCCCchhhcCCHHHHHHHHHHHHHhcC-----CCEEEEECCCCCHHH
Confidence 3678888776655 489 33 444 3332211 00011123444555554431 234444455566555
Q ss_pred HHHHHHHHHhcC-CceEEEcCcc------------------------CCCc-hhhHHHHHHHHHcCCCCCCccccc-CCC
Q 015981 196 RKRCAQEVAVRN-VSGYWIGGFG------------------------LGES-MEERPSLLNAVTDNLPKDWPRMIC-GLG 248 (397)
Q Consensus 196 R~~sa~~l~~~~-~~G~~IgGl~------------------------~ge~-~~~~~~~v~~~~~~Lp~~kpr~l~-G~g 248 (397)
-.+.++.+.+.| ++++.+.+.. .|.. .....+.+..+.+.+ .+.|.... |+.
T Consensus 176 ~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~ 254 (314)
T 2e6f_A 176 FDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVY 254 (314)
T ss_dssp HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCC
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence 555677778889 9998765532 0110 012246777777777 46777644 888
Q ss_pred ChHHHHHHHHcCCcEEecchh
Q 015981 249 LPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 249 ~P~~il~~v~~GvD~FD~~~p 269 (397)
++.++..++..|+|.+=..-+
T Consensus 255 ~~~da~~~l~~GAd~V~ig~~ 275 (314)
T 2e6f_A 255 SGEDAFLHILAGASMVQVGTA 275 (314)
T ss_dssp SHHHHHHHHHHTCSSEEECHH
T ss_pred CHHHHHHHHHcCCCEEEEchh
Confidence 999999999999998755433
No 54
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=81.34 E-value=30 Score=34.43 Aligned_cols=87 Identities=18% Similarity=0.201 Sum_probs=60.3
Q ss_pred eEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCC-------------Cc----hhhHHHHHHHHHcCCCCCCccccc
Q 015981 183 VFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLG-------------ES----MEERPSLLNAVTDNLPKDWPRMIC 245 (397)
Q Consensus 183 lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~g-------------e~----~~~~~~~v~~~~~~Lp~~kpr~l~ 245 (397)
++.=|-.+...+.-.+.++.+.+.+++|+.+.+-... -+ .+...+++..+.+.++.+.|.+..
T Consensus 300 V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~ 379 (443)
T 1tv5_A 300 VFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS 379 (443)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4555666666554555677777889999987764210 00 111256777788888777887655
Q ss_pred -CCCChHHHHHHHHcCCcEEecchh
Q 015981 246 -GLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 246 -G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
|+.++.++..++..|+|.+-..-+
T Consensus 380 GGI~s~~DA~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 380 GGIFSGLDALEKIEAGASVCQLYSC 404 (443)
T ss_dssp SSCCSHHHHHHHHHTTEEEEEESHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 889999999999999998865543
No 55
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=80.40 E-value=8.3 Score=35.55 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 225 RPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 225 ~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
..++++.+.+.. +.|..+ +|+.+|+++..+.. ++|.+-.-
T Consensus 187 ~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVG 227 (252)
T 3tha_A 187 LQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VADGVIVG 227 (252)
T ss_dssp HHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSSEEEEC
T ss_pred HHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCCEEEEC
Confidence 355666666663 578765 78899999976654 68866543
No 56
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=80.33 E-value=3.7 Score=39.04 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=57.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+|+ ..+.+. +-+
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~~Er~~v~~~~~~~~~grvpV-iaGvg~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGT-TAESPTLTHDEELELFAAVQKVVNGRVPL-IAGVGTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESST-TTTGGGSCHHHHHHHHHHHHHHSCSSSCE-EEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcE-EEeCCCcCHHHHHHHHHHHHh
Confidence 6677777777888888999999999884 465 4578899999998887655554 558874 555544 445
Q ss_pred cCC-cEEecchh
Q 015981 259 AGV-DLFDSAYI 269 (397)
Q Consensus 259 ~Gv-D~FD~~~p 269 (397)
+|. |-+=..-|
T Consensus 101 ~Ga~davlv~~P 112 (311)
T 3h5d_A 101 FGGFAAGLAIVP 112 (311)
T ss_dssp SCCCSEEEEECC
T ss_pred cCCCcEEEEcCC
Confidence 786 96655544
No 57
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=80.13 E-value=1.7 Score=41.42 Aligned_cols=81 Identities=16% Similarity=0.152 Sum_probs=58.7
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCC-ChHHHHH----HHH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLG-LPEEVLQ----GVA 258 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g-~P~~il~----~v~ 258 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+| +..+.+. +-+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~eEr~~v~~~~v~~~~grvpV-iaGvg~~t~~ai~la~~A~~ 104 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGN-TSEFYALSLEEAKEEVRRTVEYVHGRALV-VAGIGYATSTAIELGNAAKA 104 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSEE-EEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCcc-ccCcccCCHHHHHHHHHHHHHHhCCCCcE-EEEeCcCHHHHHHHHHHHHh
Confidence 46788888888888999999999999884 465 5578899999888877655554 55665 4444443 446
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 105 ~Gadavlv~~P~ 116 (316)
T 3e96_A 105 AGADAVMIHMPI 116 (316)
T ss_dssp HTCSEEEECCCC
T ss_pred cCCCEEEEcCCC
Confidence 899977766453
No 58
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=78.61 E-value=1.4 Score=41.71 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+|+ ..+.+. +.+
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvpv-iaGvg~~~t~~ai~la~~a~~ 97 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGS-TGEFAYLGTAQREAVVRATIEAAQRRVPV-VAGVASTSVADAVAQAKLYEK 97 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSG-GGTGGGCCHHHHHHHHHHHHHHHTTSSCB-EEEEEESSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcc-ccCccccCHHHHHHHHHHHHHHhCCCCcE-EEeCCCCCHHHHHHHHHHHHH
Confidence 6678888888888998999999988884 465 5578899999888877655564 558873 444444 457
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 98 ~Gadavlv~~P~ 109 (300)
T 3eb2_A 98 LGADGILAILEA 109 (300)
T ss_dssp HTCSEEEEEECC
T ss_pred cCCCEEEEcCCC
Confidence 899977666553
No 59
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=78.45 E-value=3.9 Score=38.42 Aligned_cols=79 Identities=27% Similarity=0.322 Sum_probs=55.1
Q ss_pred CCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHHc
Q 015981 190 GSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVAA 259 (397)
Q Consensus 190 g~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~~ 259 (397)
..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+|+ ..+.+. +-+.
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Lt~~Er~~v~~~~~~~~~grvpv-iaGvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGT-TAESPTLTTDEKELILKTVIDLVDKRVPV-IAGTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSCE-EEECCCSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcc-ccccccCCHHHHHHHHHHHHHHhCCCCcE-EEeCCcccHHHHHHHHHHHHHc
Confidence 345566666778888899999999884 465 4578888998888877654554 557873 555444 4568
Q ss_pred CCcEEecchhH
Q 015981 260 GVDLFDSAYIY 270 (397)
Q Consensus 260 GvD~FD~~~p~ 270 (397)
|+|-+=..-|+
T Consensus 97 Gadavlv~~P~ 107 (292)
T 3daq_A 97 GADAIMLITPY 107 (292)
T ss_dssp TCSEEEEECCC
T ss_pred CCCEEEECCCC
Confidence 99976666553
No 60
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=78.14 E-value=21 Score=33.01 Aligned_cols=120 Identities=15% Similarity=0.134 Sum_probs=69.2
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCCHHHHHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSNIEERKRCAQEVA 204 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~~~lR~~sa~~l~ 204 (397)
...+++++-....|.|.++.. |.++. ...+|.+.+-+. +. ..-.+...... .|.+.+....
T Consensus 110 ~g~e~f~~~~~~aGvdgvii~-Dlp~e------------e~~~~~~~~~~~----gl~~i~liaP~t~~-eri~~i~~~~ 171 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLIA-DVPVE------------ESAPFSKAAKAH----GIAPIFIAPPNADA-DTLKMVSEQG 171 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEET-TSCGG------------GCHHHHHHHHHT----TCEEECEECTTCCH-HHHHHHHHHC
T ss_pred hhHHHHHHHHHHcCCCEEEeC-CCCHh------------hHHHHHHHHHHc----CCeEEEEECCCCCH-HHHHHHHHhC
Confidence 456999999999999999887 33321 124444444332 21 33333333443 3554333332
Q ss_pred hcCCceEEEcCcc-CCCc---hhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 205 VRNVSGYWIGGFG-LGES---MEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 205 ~~~~~G~~IgGl~-~ge~---~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.++ -|.+.-.+ .|.. .++..+.|+.+.+.. +.|..+ +|+.+|+++-.++..|+|.+-.-
T Consensus 172 -~gf-vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 172 -EGY-TYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp -CSC-EEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred -CCc-EEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 233 34422222 1221 234567777777764 578765 68889999999999999977654
No 61
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=78.13 E-value=7.1 Score=35.95 Aligned_cols=80 Identities=19% Similarity=0.227 Sum_probs=54.2
Q ss_pred CeEEeecCC-CCHHHHHHHHHHHHhcCCceEEEcCccCCC--------------------chhhHHHHHHHHHcCCCCCC
Q 015981 182 AVFGSIVGG-SNIEERKRCAQEVAVRNVSGYWIGGFGLGE--------------------SMEERPSLLNAVTDNLPKDW 240 (397)
Q Consensus 182 ~lf~~iqGg-~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge--------------------~~~~~~~~v~~~~~~Lp~~k 240 (397)
.+++.|..| .+.+.-.+.++.+.+.|++.+-||. ...+ +.+...++++.+.+..| +.
T Consensus 18 ~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~-P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~-~~ 95 (262)
T 2ekc_A 18 ALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGF-PFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP-DI 95 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEEC-CCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TS
T ss_pred eEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECC-CCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC-CC
Confidence 466666544 4556666778888899999998964 3322 12234466777777765 58
Q ss_pred cccccCCCCh-------HHHHHHHHcCCcE
Q 015981 241 PRMICGLGLP-------EEVLQGVAAGVDL 263 (397)
Q Consensus 241 pr~l~G~g~P-------~~il~~v~~GvD~ 263 (397)
|..+|+..+| ..+-.+.+.|+|.
T Consensus 96 Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dg 125 (262)
T 2ekc_A 96 PFLLMTYYNPIFRIGLEKFCRLSREKGIDG 125 (262)
T ss_dssp CEEEECCHHHHHHHCHHHHHHHHHHTTCCE
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCE
Confidence 8888887776 3445577999993
No 62
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=78.00 E-value=11 Score=37.33 Aligned_cols=85 Identities=12% Similarity=0.029 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcc--ccc-CCC-ChHHHHHHHHcCCcEEec
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPR--MIC-GLG-LPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr--~l~-G~g-~P~~il~~v~~GvD~FD~ 266 (397)
.+++.-.+.++.+.+.|.+-+.|.-....-.+.+..++++.+.+.++ .|. |.+ -.| .....+.|+..|+|.||+
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~--~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ 254 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS--CDIECHFHNDTGMAIANAYCALEAGATHIDT 254 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS--SEEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC--CeEEEEECCCCchHHHHHHHHHHhCCCEEEE
Confidence 45666667788888889988888765555667788889988887664 343 443 233 366889999999999999
Q ss_pred chhHHhhhcce
Q 015981 267 AYIYHLTIGGF 277 (397)
Q Consensus 267 ~~p~~~a~~G~ 277 (397)
+.--.--|.|.
T Consensus 255 ti~GlGERaGN 265 (423)
T 3ivs_A 255 SILGIGERNGI 265 (423)
T ss_dssp BGGGCSSTTCB
T ss_pred ecccccCcccc
Confidence 96433334443
No 63
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=74.46 E-value=44 Score=30.91 Aligned_cols=121 Identities=13% Similarity=0.089 Sum_probs=70.6
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHh
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAV 205 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~ 205 (397)
...+++++-....|.|.++.. |.++ . ....|.+.+-+.. -.++-.+..... +.|.+.+.+..
T Consensus 112 ~g~~~f~~~~~~aGvdGvIip-Dlp~-e-----------e~~~~~~~~~~~g---l~~I~lvap~t~-~eri~~i~~~~- 173 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIA-DVPT-N-----------ESQPFVAAAEKFG---IQPIFIAPPTAS-DETLRAVAQLG- 173 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEET-TSCG-G-----------GCHHHHHHHHHTT---CEEEEEECTTCC-HHHHHHHHHHC-
T ss_pred HhHHHHHHHHHHCCCCEEEEC-CCCH-H-----------HHHHHHHHHHHcC---CeEEEEECCCCC-HHHHHHHHHHC-
Confidence 456999999999999999887 4332 1 1234444443321 113333333333 34655444442
Q ss_pred cCCceEEEcCcc-CCCc---hhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 206 RNVSGYWIGGFG-LGES---MEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 206 ~~~~G~~IgGl~-~ge~---~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.++ -|.+...+ .|.. .....++++.+.+.. +.|..+ +|+.+|+++-.++..|+|.+-.-
T Consensus 174 ~gf-iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 174 KGY-TYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CSC-EEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCe-EEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 244 34333222 1221 234567777777765 578876 79999999999999999976544
No 64
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=74.25 E-value=46 Score=32.14 Aligned_cols=117 Identities=14% Similarity=0.180 Sum_probs=65.3
Q ss_pred hHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE-eecCCCCHHHHHHHHHHHHhcCC
Q 015981 130 EYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFG-SIVGGSNIEERKRCAQEVAVRNV 208 (397)
Q Consensus 130 ~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~-~iqGg~~~~lR~~sa~~l~~~~~ 208 (397)
+.++.....|+|++.. |..... + ..+...++|+++... .-.+++ -| ... +-++.+.+.|+
T Consensus 103 e~~~~a~~aGvdvI~i--d~a~G~-~-----~~~~e~I~~ir~~~~----~~~Vi~G~V---~T~----e~A~~a~~aGa 163 (361)
T 3r2g_A 103 QRAEALRDAGADFFCV--DVAHAH-A-----KYVGKTLKSLRQLLG----SRCIMAGNV---ATY----AGADYLASCGA 163 (361)
T ss_dssp HHHHHHHHTTCCEEEE--ECSCCS-S-----HHHHHHHHHHHHHHT----TCEEEEEEE---CSH----HHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEE--eCCCCC-c-----HhHHHHHHHHHHhcC----CCeEEEcCc---CCH----HHHHHHHHcCC
Confidence 4455556669996543 222111 1 123345667766431 112222 22 222 23567778899
Q ss_pred ceEEEcCccCCCchh---------hHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchh
Q 015981 209 SGYWIGGFGLGESME---------ERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 209 ~G~~IgGl~~ge~~~---------~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
+++.+| .+.|.... .....|..+.+... |.+.- |+.++.++..++++|+|.+=.--+
T Consensus 164 D~I~Vg-~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~---PVIAdGGI~~~~di~kALa~GAd~V~iGr~ 230 (361)
T 3r2g_A 164 DIIKAG-IGGGSVCSTRIKTGFGVPMLTCIQDCSRADR---SIVADGGIKTSGDIVKALAFGADFVMIGGM 230 (361)
T ss_dssp SEEEEC-CSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS---EEEEESCCCSHHHHHHHHHTTCSEEEESGG
T ss_pred CEEEEc-CCCCcCccccccCCccHHHHHHHHHHHHhCC---CEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 999984 33222110 12345555555443 76543 888999999999999997765544
No 65
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=73.51 E-value=17 Score=32.66 Aligned_cols=120 Identities=13% Similarity=0.016 Sum_probs=60.9
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeec----CCC-C-HHHHHHHH
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIV----GGS-N-IEERKRCA 200 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iq----Gg~-~-~~lR~~sa 200 (397)
|++.|++.....|+|++..-. ..+.+ +++...+.+++. . ..++.... |.. . .++-.+.+
T Consensus 79 Tv~~~~~~~~~~gad~vtvh~-----~~G~~----~l~~~~~~~~~~---g---~~v~vLt~~s~~~~~~~~~~~~~~~a 143 (228)
T 3m47_A 79 TNEKICRATFKAGADAIIVHG-----FPGAD----SVRACLNVAEEM---G---REVFLLTEMSHPGAEMFIQGAADEIA 143 (228)
T ss_dssp HHHHHHHHHHHTTCSEEEEES-----TTCHH----HHHHHHHHHHHH---T---CEEEEECCCCSGGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEec-----cCCHH----HHHHHHHHHHhc---C---CCeEEEEeCCCccHHHHHHHHHHHHH
Confidence 678899999999999987652 22332 233333323221 1 11332222 111 1 12333444
Q ss_pred HHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCCh-HHHHHHHHcCCcEEecchhH
Q 015981 201 QEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLP-EEVLQGVAAGVDLFDSAYIY 270 (397)
Q Consensus 201 ~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P-~~il~~v~~GvD~FD~~~p~ 270 (397)
+...+.|++|++.++ ...++ +..+.+..|.+-+....|+|-- .+. .++..|.|.+-...+.
T Consensus 144 ~~a~~~G~~GvV~~a----t~~~e----~~~ir~~~~~~~~iv~PGI~~~g~~p-~~~~aGad~iVvGr~I 205 (228)
T 3m47_A 144 RMGVDLGVKNYVGPS----TRPER----LSRLREIIGQDSFLISPGVGAQGGDP-GETLRFADAIIVGRSI 205 (228)
T ss_dssp HHHHHTTCCEEECCS----SCHHH----HHHHHHHHCSSSEEEECC----------CGGGTCSEEEECHHH
T ss_pred HHHHHhCCcEEEECC----CChHH----HHHHHHhcCCCCEEEecCcCcCCCCH-hHHHcCCCEEEECHHH
Confidence 444567888887654 22222 2334445566666667788632 145 8889999988776543
No 66
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=72.41 E-value=35 Score=38.28 Aligned_cols=78 Identities=19% Similarity=0.137 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEec
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~ 266 (397)
.+.+.-.+.++.+.+.|.+-+.|.-....-.+.+..++|+++.+.+ +.|.+++ -.| .....+.|++.|+|.||+
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~--~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ 766 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV--DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDT 766 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC--CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc--CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEE
Confidence 4567777888999999999988876655567778889999888886 5676443 233 467899999999999999
Q ss_pred chhH
Q 015981 267 AYIY 270 (397)
Q Consensus 267 ~~p~ 270 (397)
+.--
T Consensus 767 ai~G 770 (1150)
T 3hbl_A 767 AVAS 770 (1150)
T ss_dssp BCGG
T ss_pred eccc
Confidence 9643
No 67
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=70.93 E-value=31 Score=31.86 Aligned_cols=119 Identities=12% Similarity=0.120 Sum_probs=67.1
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCCHHHHHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSNIEERKRCAQEVA 204 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~~~lR~~sa~~l~ 204 (397)
+++.+ ++.....|+|.+...+...+ .+.++.-++ .+.+. +. ++.-+. +.+.-.++.
T Consensus 123 id~~q-v~~A~~~GAD~VlLi~a~l~----~~~l~~l~~-------~a~~l----Gl~~lvev~---t~ee~~~A~---- 179 (272)
T 3qja_A 123 VQPYQ-IHEARAHGADMLLLIVAALE----QSVLVSMLD-------RTESL----GMTALVEVH---TEQEADRAL---- 179 (272)
T ss_dssp CSHHH-HHHHHHTTCSEEEEEGGGSC----HHHHHHHHH-------HHHHT----TCEEEEEES---SHHHHHHHH----
T ss_pred cCHHH-HHHHHHcCCCEEEEecccCC----HHHHHHHHH-------HHHHC----CCcEEEEcC---CHHHHHHHH----
Confidence 44444 45557899999977533222 222222222 22221 22 333332 333332222
Q ss_pred hcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccc-ccCCCChHHHHHHHHcCCcEEecch
Q 015981 205 VRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRM-ICGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 205 ~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~-l~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
+.|++.+.+.+-........ .+.+..+.+.+|.+.|.. ..|+.+|.++..+...|+|-|-..-
T Consensus 180 ~~Gad~IGv~~r~l~~~~~d-l~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGs 243 (272)
T 3qja_A 180 KAGAKVIGVNARDLMTLDVD-RDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGE 243 (272)
T ss_dssp HHTCSEEEEESBCTTTCCBC-TTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HCCCCEEEECCCcccccccC-HHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 45788888876432111001 233445567788888876 5699999999999999999887653
No 68
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=69.21 E-value=5.7 Score=37.09 Aligned_cols=83 Identities=27% Similarity=0.210 Sum_probs=55.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+. ++|+.+.|- .|| +.+|+.++++.+.+ ..| .+.|+|+ ..+.+. +.+
T Consensus 14 g~iD~~~l~~lv~~li~~-v~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~----rvp-viaGvg~~~t~~ai~la~~A~~ 86 (283)
T 2pcq_A 14 GRLDEEAFRELAQALEPL-VDGLLVYGS-NGEGVHLTPEERARGLRALRP----RKP-FLVGLMEETLPQAEGALLEAKA 86 (283)
T ss_dssp CCBCHHHHHHHHHHHGGG-SSCCEETCT-TTTGGGSCHHHHHHHHHTCCC----SSC-CEEEECCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhh-CCEEEECCc-CcCchhcCHHHHHHHHHHHHh----CCc-EEEeCCCCCHHHHHHHHHHHHh
Confidence 667888777788888888 999999884 465 44788888887776 334 4567874 444433 456
Q ss_pred cCCcEEecchhH--Hh-hhccee
Q 015981 259 AGVDLFDSAYIY--HL-TIGGFA 278 (397)
Q Consensus 259 ~GvD~FD~~~p~--~~-a~~G~a 278 (397)
.|+|-+=..-|+ +. ++.|..
T Consensus 87 ~Gadavlv~~P~y~~~~~~~~l~ 109 (283)
T 2pcq_A 87 AGAMALLATPPRYYHGSLGAGLL 109 (283)
T ss_dssp HTCSEEEECCCCTTGGGTTTHHH
T ss_pred cCCCEEEecCCcCCCCCCHHHHH
Confidence 899977665443 33 444443
No 69
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=68.83 E-value=7.5 Score=36.89 Aligned_cols=81 Identities=14% Similarity=0.145 Sum_probs=56.4
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCC-ChHHHHH----HHH
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLG-LPEEVLQ----GVA 258 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g-~P~~il~----~v~ 258 (397)
.|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++.+.+......|. +.|+| +..+.+. +.+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~Ls~eEr~~vi~~~~~~~~grvpV-iaGvg~st~~ai~la~~A~~ 104 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGN-TGEFYALTIEEAKQVATRVTELVNGRATV-VAGIGYSVDTAIELGKSAID 104 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSEE-EEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcc-cCChhhCCHHHHHHHHHHHHHHhCCCCeE-EecCCcCHHHHHHHHHHHHH
Confidence 36678777777888888899999998874 354 4478888998888776655554 45666 4434433 346
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
.|+|-+=..-|+
T Consensus 105 ~Gadavlv~~P~ 116 (314)
T 3d0c_A 105 SGADCVMIHQPV 116 (314)
T ss_dssp TTCSEEEECCCC
T ss_pred cCCCEEEECCCC
Confidence 899977666553
No 70
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=67.88 E-value=11 Score=36.93 Aligned_cols=75 Identities=13% Similarity=0.179 Sum_probs=51.2
Q ss_pred HHHHHHhcCCceEEEcCccCC--CchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 199 CAQEVAVRNVSGYWIGGFGLG--ESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~g--e~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
-++.+.+.|++++.++|-+.. .......+.+..+.+.++.+.|.+.- |+.++.|++.++++|+|.+=..-|...+
T Consensus 265 ~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~ 342 (392)
T 2nzl_A 265 DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWG 342 (392)
T ss_dssp HHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHH
Confidence 366777889999999764310 00011234555555555555677665 8899999999999999988777666543
No 71
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=67.45 E-value=13 Score=36.01 Aligned_cols=75 Identities=21% Similarity=0.263 Sum_probs=51.6
Q ss_pred HHHHHHhcCCceEEEcCccC--CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 199 CAQEVAVRNVSGYWIGGFGL--GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~--ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
-++.+.+.|++++.+.|-+. .....-..+.+..+.+.++.+.|.+.- |+.++.|++.++++|+|.+=..-|...+
T Consensus 242 ~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~ 319 (368)
T 2nli_A 242 DADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFG 319 (368)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 35666778999999966431 011111235556666666656777655 8999999999999999988877666443
No 72
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=67.21 E-value=10 Score=42.61 Aligned_cols=78 Identities=19% Similarity=0.125 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEec
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~ 266 (397)
.+.+.-.+.++.+.+.|.+-+.|.-....-.+.+..++|+++.+.+ +.|..++ -.| .....+.|++.|+|.||+
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~--~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT--GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDA 783 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC--SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEe
Confidence 5777788889999999999988877665667788899999998887 4665443 233 377899999999999999
Q ss_pred chhH
Q 015981 267 AYIY 270 (397)
Q Consensus 267 ~~p~ 270 (397)
+.--
T Consensus 784 ti~G 787 (1165)
T 2qf7_A 784 AMDA 787 (1165)
T ss_dssp BCGG
T ss_pred cccc
Confidence 9643
No 73
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=66.73 E-value=16 Score=33.50 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=52.0
Q ss_pred CCeEEeecCCCC-HHHHHHHHHHHHhcCCceEEEcCccCCCc--------------------hhhHHHHHHHHHcCCCCC
Q 015981 181 GAVFGSIVGGSN-IEERKRCAQEVAVRNVSGYWIGGFGLGES--------------------MEERPSLLNAVTDNLPKD 239 (397)
Q Consensus 181 ~~lf~~iqGg~~-~~lR~~sa~~l~~~~~~G~~IgGl~~ge~--------------------~~~~~~~v~~~~~~Lp~~ 239 (397)
..+.+.|..|.. .+.-.+.++.+.+.|++.+-+|. ...++ .+...++++.+.+..+ +
T Consensus 17 ~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~-P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~-~ 94 (268)
T 1qop_A 17 GAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGV-PFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP-T 94 (268)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC-CCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS-S
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECC-CCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-C
Confidence 347777765543 45556678888888999998864 33221 1223466777766522 4
Q ss_pred CcccccCCCCh-------HHHHHHHHcCCc
Q 015981 240 WPRMICGLGLP-------EEVLQGVAAGVD 262 (397)
Q Consensus 240 kpr~l~G~g~P-------~~il~~v~~GvD 262 (397)
.|.++|+-.+| ..+-.+.+.|+|
T Consensus 95 ~Pv~lm~y~n~v~~~g~~~~~~~~~~aGad 124 (268)
T 1qop_A 95 IPIGLLMYANLVFNNGIDAFYARCEQVGVD 124 (268)
T ss_dssp SCEEEEECHHHHHTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEcccHHHHhhHHHHHHHHHHcCCC
Confidence 78888765555 556668899999
No 74
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=66.65 E-value=18 Score=33.63 Aligned_cols=83 Identities=17% Similarity=0.084 Sum_probs=54.3
Q ss_pred eEEeecCCCCHHHHHHHHHHHHh-cCCceEEEcC---------ccCCCchhhHHHHHHHHHcCCCCCCcccc---cCCCC
Q 015981 183 VFGSIVGGSNIEERKRCAQEVAV-RNVSGYWIGG---------FGLGESMEERPSLLNAVTDNLPKDWPRMI---CGLGL 249 (397)
Q Consensus 183 lf~~iqGg~~~~lR~~sa~~l~~-~~~~G~~IgG---------l~~ge~~~~~~~~v~~~~~~Lp~~kpr~l---~G~g~ 249 (397)
.+++-.+|.+.+.-.++++.+.+ .+++++-|.- ...|.+.+...++++++.+.+ +.|..+ .++.+
T Consensus 100 p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~--~~pv~vk~~~~~~~ 177 (311)
T 1ep3_A 100 PIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS--KVPLYVKLSPNVTD 177 (311)
T ss_dssp CEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC--SSCEEEEECSCSSC
T ss_pred cEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCChHH
Confidence 34444455566666677877776 7888887742 222334455577888877765 466543 36667
Q ss_pred hHHHH-HHHHcCCcEEecc
Q 015981 250 PEEVL-QGVAAGVDLFDSA 267 (397)
Q Consensus 250 P~~il-~~v~~GvD~FD~~ 267 (397)
+.+++ .+.+.|+|.++.+
T Consensus 178 ~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 77754 5568999999885
No 75
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=65.77 E-value=8.5 Score=37.09 Aligned_cols=76 Identities=16% Similarity=0.199 Sum_probs=47.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCcccccCCCC--hHHHHH----HHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMICGLGL--PEEVLQ----GVA 258 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~--P~~il~----~v~ 258 (397)
|..|.+.-++-++.+.+.|++|+.+.|- .|| +.+|+.++++... ....| .+.|+|+ ..+.+. +.+
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~eEr~~vi~~~~---~grvp-ViaGvg~~st~eai~la~~A~~ 116 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGS-MGDWPLLTDEQRMEGVERLV---KAGIP-VIVGTGAVNTASAVAHAVHAQK 116 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSG-GGTGGGSCHHHHHHHHHHHH---HTTCC-EEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCcc-CcChhhCCHHHHHHHHHHHh---CCCCc-EEEecCCCCHHHHHHHHHHHHh
Confidence 4566666666777777788999888774 354 4467777777622 22333 4567774 333333 346
Q ss_pred cCCcEEecchh
Q 015981 259 AGVDLFDSAYI 269 (397)
Q Consensus 259 ~GvD~FD~~~p 269 (397)
.|+|-+=.+-|
T Consensus 117 ~Gadavlv~~P 127 (344)
T 2hmc_A 117 VGAKGLMVIPR 127 (344)
T ss_dssp HTCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 89997665544
No 76
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=65.68 E-value=50 Score=36.36 Aligned_cols=133 Identities=13% Similarity=0.215 Sum_probs=73.4
Q ss_pred ChhhHHHHHHhc---CCcEEEEcCCCCCCCCCHH-------HHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHH
Q 015981 127 KPVEYMEMITSM---KPNLWATLADEVPAWANNK-------RNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEER 196 (397)
Q Consensus 127 tpe~~~~~q~~i---~pDi~~~L~d~~~~~~~~k-------r~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR 196 (397)
++++|.++.+.+ ++|++..=. .+|.....+ .-.+.+..-++|+++.. +-+++.-+-.+.. ++
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~-~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-----~~Pv~vK~~~~~~-~~- 717 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNL-SCPHGMGERGMGLACGQDPELVRNICRWVRQAV-----QIPFFAKLTPNVT-DI- 717 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-CCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-----SSCEEEEECSCSS-CH-
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEC-CCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-----CCceEEEeCCChH-HH-
Confidence 477777776655 789875532 233221111 11233444455655432 1234443333322 22
Q ss_pred HHHHHHHHhcCCceEEEc----------------------Ccc--C---CCch-hhHHHHHHHHHcCCCCCCccccc-CC
Q 015981 197 KRCAQEVAVRNVSGYWIG----------------------GFG--L---GESM-EERPSLLNAVTDNLPKDWPRMIC-GL 247 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~Ig----------------------Gl~--~---ge~~-~~~~~~v~~~~~~Lp~~kpr~l~-G~ 247 (397)
.+.++.+.+.|++|+.+. |.. . |... ..-.+++..+.+.+| +.|.+.. |+
T Consensus 718 ~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~-~ipvi~~GGI 796 (1025)
T 1gte_A 718 VSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALP-GFPILATGGI 796 (1025)
T ss_dssp HHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHST-TCCEEEESSC
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcC-CCCEEEecCc
Confidence 234556667799999882 110 0 1111 111356777766664 4776655 88
Q ss_pred CChHHHHHHHHcCCcEEecch
Q 015981 248 GLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 248 g~P~~il~~v~~GvD~FD~~~ 268 (397)
.++.++..++.+|+|.+-..-
T Consensus 797 ~s~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 797 DSAESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp CSHHHHHHHHHTTCSEEEESH
T ss_pred CCHHHHHHHHHcCCCEEEEee
Confidence 899999999999999876653
No 77
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=65.63 E-value=14 Score=34.27 Aligned_cols=67 Identities=19% Similarity=0.246 Sum_probs=44.5
Q ss_pred HHHHHHhcCCceEEEcCccC---------------------CCc-hhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHH
Q 015981 199 CAQEVAVRNVSGYWIGGFGL---------------------GES-MEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQ 255 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~---------------------ge~-~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~ 255 (397)
.++.+.+.+++++.+.|... |.. .....+.+..+.+.+ +.|.... |+.++.++..
T Consensus 181 ~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~ 258 (311)
T 1ep3_A 181 IAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLE 258 (311)
T ss_dssp HHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHH
Confidence 35666778999998844210 111 011246666666665 5777654 7889999999
Q ss_pred HHHcCCcEEecc
Q 015981 256 GVAAGVDLFDSA 267 (397)
Q Consensus 256 ~v~~GvD~FD~~ 267 (397)
+++.|+|.+=..
T Consensus 259 ~l~~GAd~V~vg 270 (311)
T 1ep3_A 259 MYMAGASAVAVG 270 (311)
T ss_dssp HHHHTCSEEEEC
T ss_pred HHHcCCCEEEEC
Confidence 999999987544
No 78
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=64.90 E-value=20 Score=34.58 Aligned_cols=122 Identities=12% Similarity=0.067 Sum_probs=78.0
Q ss_pred hhHHHHHHhcCCcEE-EEcCCC-C--CC----C------CCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCCH
Q 015981 129 VEYMEMITSMKPNLW-ATLADE-V--PA----W------ANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSNI 193 (397)
Q Consensus 129 e~~~~~q~~i~pDi~-~~L~d~-~--~~----~------~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~~ 193 (397)
.+.++..+..|+|++ ...... + ++ + .+.-+..+..+-+..|+++..+..++.+. +|..+- +
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~~---d- 113 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTLF---S- 113 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEEC---S-
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEeeC---C-
Confidence 456677778888886 321121 1 11 1 12224555566677888877765544454 555553 3
Q ss_pred HHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHH----cCCcEEe
Q 015981 194 EERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVA----AGVDLFD 265 (397)
Q Consensus 194 ~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~----~GvD~FD 265 (397)
..+++.+.+.+++.|-||..... -..+|+++.. .+||.+|. |.++..+|..+++ .|.|+.=
T Consensus 114 ---~~svd~l~~~~v~~~KI~S~~~~-----n~~LL~~va~---~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiL 179 (349)
T 2wqp_A 114 ---RAAALRLQRMDIPAYKIGSGECN-----NYPLIKLVAS---FGKPIILSTGMNSIESIKKSVEIIREAGVPYAL 179 (349)
T ss_dssp ---HHHHHHHHHHTCSCEEECGGGTT-----CHHHHHHHHT---TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEE
T ss_pred ---HHHHHHHHhcCCCEEEECccccc-----CHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 35677888888999999864422 2567777765 38999885 9999999999974 4555544
No 79
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=64.77 E-value=11 Score=35.96 Aligned_cols=63 Identities=16% Similarity=0.110 Sum_probs=47.6
Q ss_pred hcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc---CCC-ChHHHHHHHHcCCcEEecchh
Q 015981 205 VRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC---GLG-LPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 205 ~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g-~P~~il~~v~~GvD~FD~~~p 269 (397)
+.|++.+.|........+.+..++++.+.+.+| .|..++ -.| .....+.+++.|+|.||++.-
T Consensus 154 ~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~--~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~ 220 (320)
T 3dxi_A 154 DKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH--VPVGFHGHDNLQLGLINSITAIDDGIDFIDATIT 220 (320)
T ss_dssp TTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC--SCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGG
T ss_pred hCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC--CeEEEEeCCCCccHHHHHHHHHHhCCCEEEEecc
Confidence 458888888876655677788899999998886 565443 133 356788899999999999964
No 80
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=63.54 E-value=7.5 Score=35.67 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=63.2
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEe-ecCCCCHHHHHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGS-IVGGSNIEERKRCAQEVA 204 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~-iqGg~~~~lR~~sa~~l~ 204 (397)
-+|++|++.....|+|++..-.+.++ .+.|+++..++ .+...|+ +-.+...+.. +.+.
T Consensus 96 ~~p~~~i~~~~~aGAd~itvH~Ea~~----------~~~~~i~~ir~-------~G~k~Gvalnp~Tp~e~l----~~~l 154 (246)
T 3inp_A 96 KPVDALIESFAKAGATSIVFHPEASE----------HIDRSLQLIKS-------FGIQAGLALNPATGIDCL----KYVE 154 (246)
T ss_dssp SSCHHHHHHHHHHTCSEEEECGGGCS----------CHHHHHHHHHT-------TTSEEEEEECTTCCSGGG----TTTG
T ss_pred CCHHHHHHHHHHcCCCEEEEccccch----------hHHHHHHHHHH-------cCCeEEEEecCCCCHHHH----HHHH
Confidence 46789999999999999988755432 13445544432 1332333 3334443322 2332
Q ss_pred hcCCceEEEcCc-------cCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecch
Q 015981 205 VRNVSGYWIGGF-------GLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 205 ~~~~~G~~IgGl-------~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
+ .++.+.+-.. ...+..-+..+-++..++....+.+.-+-|-=+|..+..+++.|+|+|-.-.
T Consensus 155 ~-~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GS 224 (246)
T 3inp_A 155 S-NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGS 224 (246)
T ss_dssp G-GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESH
T ss_pred h-cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEeh
Confidence 2 2443333222 1222221222223333222112344444444469999999999999998763
No 81
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=63.19 E-value=18 Score=35.17 Aligned_cols=132 Identities=12% Similarity=0.137 Sum_probs=74.6
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCC-----CC-CCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCCHHHHHHH
Q 015981 127 KPVEYMEMITSMKPNLWATLADEV-----PA-WANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSNIEERKRC 199 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~-----~~-~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~~~lR~~s 199 (397)
+.+++.+..+.+++|....=-+.. |. ..+.+ .....++|+.+.. +.+ ++.-|.-|... +-
T Consensus 156 ~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~----~~~~~I~~l~~~~-----~~PVivK~vg~g~s~----e~ 222 (365)
T 3sr7_A 156 PYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFR----SWKKHLSDYAKKL-----QLPFILKEVGFGMDV----KT 222 (365)
T ss_dssp CHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCH----HHHHHHHHHHHHC-----CSCEEEEECSSCCCH----HH
T ss_pred CHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHH----HHHHHHHHHHHhh-----CCCEEEEECCCCCCH----HH
Confidence 467889999999999764321221 11 11111 2223455555432 123 33434323343 34
Q ss_pred HHHHHhcCCceEEEcCccCCCchh------------------hHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESME------------------ERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG 260 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~------------------~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G 260 (397)
++.+.+.|++++.++|-+ |.... .....+..+. .+..+.|.+.. |+-++.|++.++.+|
T Consensus 223 A~~l~~aGad~I~V~g~G-Gt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~-~~~~~ipvia~GGI~~g~Dv~KaLalG 300 (365)
T 3sr7_A 223 IQTAIDLGVKTVDISGRG-GTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQ-PLMDKVEILASGGIRHPLDIIKALVLG 300 (365)
T ss_dssp HHHHHHHTCCEEECCCBC---------------CGGGTTCSCBHHHHHHHHG-GGTTTSEEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEeCCC-CcccchhhccccccccccccccccHHHHHHHHH-HhcCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 566777899999997753 22110 0123333433 33334566555 889999999999999
Q ss_pred CcEEecchhHHhh
Q 015981 261 VDLFDSAYIYHLT 273 (397)
Q Consensus 261 vD~FD~~~p~~~a 273 (397)
.|.+=..-|...+
T Consensus 301 AdaV~ig~~~l~a 313 (365)
T 3sr7_A 301 AKAVGLSRTMLEL 313 (365)
T ss_dssp CSEEEESHHHHHH
T ss_pred CCEEEECHHHHHH
Confidence 9988887666543
No 82
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=61.70 E-value=10 Score=34.41 Aligned_cols=60 Identities=15% Similarity=0.169 Sum_probs=41.2
Q ss_pred HHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhH
Q 015981 198 RCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIY 270 (397)
Q Consensus 198 ~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~ 270 (397)
+-++...+.|.+.++.+++ + .++++.+... ...++.|+.+|.++..+.++|+|.+=. ||.
T Consensus 97 ~~a~~Ai~AGA~fIvsP~~----~----~~vi~~~~~~----gi~~ipGv~TptEi~~A~~~Gad~vK~-FPa 156 (232)
T 4e38_A 97 EQALAAKEAGATFVVSPGF----N----PNTVRACQEI----GIDIVPGVNNPSTVEAALEMGLTTLKF-FPA 156 (232)
T ss_dssp HHHHHHHHHTCSEEECSSC----C----HHHHHHHHHH----TCEEECEECSHHHHHHHHHTTCCEEEE-CST
T ss_pred HHHHHHHHcCCCEEEeCCC----C----HHHHHHHHHc----CCCEEcCCCCHHHHHHHHHcCCCEEEE-CcC
Confidence 3455566678877766542 2 2455555442 233578999999999999999998854 775
No 83
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=60.75 E-value=60 Score=28.83 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=50.4
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEc-CccC-CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEE
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIG-GFGL-GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLF 264 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~Ig-Gl~~-ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~F 264 (397)
-++...+.-.+.++.+.+.|++++... |+.. |-+. +.+..+.+.++.+.|.... |+-++.+.+..++.|+|.+
T Consensus 126 ~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~----~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 126 TPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTL----EEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp GGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCH----HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCH----HHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 466677666677777778899888654 4322 2233 2333333334445676655 6889999999999999976
Q ss_pred ecch
Q 015981 265 DSAY 268 (397)
Q Consensus 265 D~~~ 268 (397)
=.+.
T Consensus 202 G~s~ 205 (225)
T 1mzh_A 202 GTSS 205 (225)
T ss_dssp EESC
T ss_pred HHcc
Confidence 5553
No 84
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=60.71 E-value=35 Score=31.69 Aligned_cols=82 Identities=16% Similarity=-0.010 Sum_probs=53.8
Q ss_pred eEEeecCCCCHHHHHHHHHHHHhcCCc-eEEEcCc--------cCCCchhhHHHHHHHHHcCCCCCCccccc-CC-CChH
Q 015981 183 VFGSIVGGSNIEERKRCAQEVAVRNVS-GYWIGGF--------GLGESMEERPSLLNAVTDNLPKDWPRMIC-GL-GLPE 251 (397)
Q Consensus 183 lf~~iqGg~~~~lR~~sa~~l~~~~~~-G~~IgGl--------~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~-g~P~ 251 (397)
+++.| +|...+.-.++++.+.+.+++ ++.|.-- ..|.+++...++++++.+.. +.|..+- .. .++.
T Consensus 96 ~~~~i-~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~~~~~~~ 172 (311)
T 1jub_A 96 IFFSI-AGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLPPYFDLV 172 (311)
T ss_dssp CEEEE-CCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCSHH
T ss_pred EEEEc-CCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHH
Confidence 45555 456777777888888888999 8888421 12335566788888888775 5776542 22 2555
Q ss_pred HH----HHHHHcCCcEEecc
Q 015981 252 EV----LQGVAAGVDLFDSA 267 (397)
Q Consensus 252 ~i----l~~v~~GvD~FD~~ 267 (397)
++ -.+.+.|+|.+...
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEEC
T ss_pred HHHHHHHHHHHcCCcEEEec
Confidence 54 23446799988765
No 85
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=60.68 E-value=20 Score=34.70 Aligned_cols=74 Identities=16% Similarity=0.126 Sum_probs=49.5
Q ss_pred HHHHHHhcCCceEEEcCccCC--CchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHHh
Q 015981 199 CAQEVAVRNVSGYWIGGFGLG--ESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYHL 272 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~g--e~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~~ 272 (397)
-++.+.+.|++|+.+.|-+.. .....-.++|..+.+.+..+.|.+.- |+.++.|++.++++|+|.+=..-|...
T Consensus 230 ~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 230 DAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILW 306 (352)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 356677889999999664310 11111234555555555545676655 899999999999999998777666543
No 86
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.35 E-value=16 Score=35.79 Aligned_cols=64 Identities=17% Similarity=0.240 Sum_probs=48.5
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
++.+.+.+++.+.|.. +.|.. +...++++++.+..| +.|..+-++.++.+...+.+.|+|.++.
T Consensus 158 a~~~~~~G~d~i~i~~-~~g~~-~~~~e~i~~ir~~~~-~~pviv~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 158 VEELVKAHVDILVIDS-AHGHS-TRIIELIKKIKTKYP-NLDLIAGNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHTTCSEEEECC-SCCSS-HHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHCCCCEEEEeC-CCCCh-HHHHHHHHHHHHHCC-CCeEEEcCCCcHHHHHHHHhcCCCEEEE
Confidence 4556677899888732 23433 556788888888886 6777665788999999999999999988
No 87
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=60.35 E-value=5.3 Score=30.51 Aligned_cols=46 Identities=17% Similarity=0.292 Sum_probs=33.2
Q ss_pred CCcccccccHHHHHHHhhcChhhHhHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015981 324 CCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSRR 387 (397)
Q Consensus 324 ~C~tC~~~traYlhHLl~~~Eml~~~LL~~HNl~~~~~~~~~iR~aI~~g~l~~~~~~f~~~~~ 387 (397)
-|+.|++-+= ...+-.++ ..+-..||+.|.+|.=++-+..|+..|+
T Consensus 28 RCp~Cqnqsi------~dSna~iA------------~dlR~~V~~~l~~G~sd~eI~~~~v~RY 73 (84)
T 2hl7_A 28 RCPKCQNQDI------ADSNAPIA------------ADLRKQIYGQLQQGKSDGEIVDYMVARY 73 (84)
T ss_dssp ECTTSSSCBT------TTCCSHHH------------HHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred cCCCCCCCch------hhcCcHHH------------HHHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 4889999773 33333333 3455679999999998888888887775
No 88
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=59.96 E-value=18 Score=34.23 Aligned_cols=131 Identities=14% Similarity=0.068 Sum_probs=74.2
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHH------HHHHHHHHHHHHHHHhCCCCCCeEEe-ecCCCCHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNK------TSVDRTVKWLDECIARSPAGGAVFGS-IVGGSNIEERKR 198 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~------~sverT~~w~~~~l~~~~~~~~lf~~-iqGg~~~~lR~~ 198 (397)
.+++...+..+.+++|.+.. +-.. ..+... +.+-..++|+.+ .+.+++.- |.+|...+
T Consensus 132 ~~~~~~~~a~~~~~~~a~~i-~~n~----~~~~~~~~~~~~~~~~~~i~~vr~------~~~Pv~vK~v~~g~~~e---- 196 (332)
T 1vcf_A 132 YGRDDLLRLVEMLEADALAF-HVNP----LQEAVQRGDTDFRGLVERLAELLP------LPFPVMVKEVGHGLSRE---- 196 (332)
T ss_dssp CCHHHHHHHHHHHTCSEEEE-ECCH----HHHHHTTSCCCCTTHHHHHHHHCS------CSSCEEEECSSSCCCHH----
T ss_pred cChHHHHHHHhhcCCCceee-ccch----HHHHhcCCCccHHHHHHHHHHHHc------CCCCEEEEecCCCCCHH----
Confidence 56888888888888885421 1110 000000 001122333332 12234433 54445543
Q ss_pred HHHHHHhcCCceEEEcCccCC--------Cc------------hhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHH
Q 015981 199 CAQEVAVRNVSGYWIGGFGLG--------ES------------MEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGV 257 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~g--------e~------------~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v 257 (397)
-++.+.+.|++++.+.|-+.+ .. .....+.|..+.+.++ +.|.+.. |+.++.+++.++
T Consensus 197 ~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal 275 (332)
T 1vcf_A 197 AALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKAL 275 (332)
T ss_dssp HHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHH
Confidence 356777889999999653211 00 0112455566666665 4676654 889999999999
Q ss_pred HcCCcEEecchhHHh
Q 015981 258 AAGVDLFDSAYIYHL 272 (397)
Q Consensus 258 ~~GvD~FD~~~p~~~ 272 (397)
++|+|.+=..-|...
T Consensus 276 ~~GAd~V~igr~~l~ 290 (332)
T 1vcf_A 276 ALGADLLAVARPLLR 290 (332)
T ss_dssp HHTCSEEEECGGGHH
T ss_pred HhCCChHhhhHHHHH
Confidence 999998877766543
No 89
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=59.75 E-value=25 Score=33.91 Aligned_cols=88 Identities=15% Similarity=0.139 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHhCCCCCC-eEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCc
Q 015981 163 VDRTVKWLDECIARSPAGGA-VFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWP 241 (397)
Q Consensus 163 verT~~w~~~~l~~~~~~~~-lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kp 241 (397)
.+-+..|+++..+..++.+. .|..+- + .++++.+.+.+++.|-||..... -..+|+++.. ..||
T Consensus 73 ~el~~e~~~~L~~~~~~~Gi~~~st~f---D----~~svd~l~~~~v~~~KI~S~~~~-----N~pLL~~va~---~gKP 137 (350)
T 3g8r_A 73 TRLQPEQMQKLVAEMKANGFKAICTPF---D----EESVDLIEAHGIEIIKIASCSFT-----DWPLLERIAR---SDKP 137 (350)
T ss_dssp TCCCHHHHHHHHHHHHHTTCEEEEEEC---S----HHHHHHHHHTTCCEEEECSSSTT-----CHHHHHHHHT---SCSC
T ss_pred hcCCHHHHHHHHHHHHHcCCcEEeccC---C----HHHHHHHHHcCCCEEEECccccc-----CHHHHHHHHh---hCCc
Confidence 44667888777765544454 555553 3 35678888899999999864322 2467777765 4899
Q ss_pred cccc-CCCChHHHHHHHH----cCCcEEe
Q 015981 242 RMIC-GLGLPEEVLQGVA----AGVDLFD 265 (397)
Q Consensus 242 r~l~-G~g~P~~il~~v~----~GvD~FD 265 (397)
.+|. |.++..+|..+++ .|-++.-
T Consensus 138 viLstGmstl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 138 VVASTAGARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTTCCEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 9885 9999999999975 4666555
No 90
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=59.55 E-value=20 Score=34.31 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEc---CccC-----CCchhhHHHHHHHHHcCCCCCCccccc---CCCChHHHHHHHHc
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIG---GFGL-----GESMEERPSLLNAVTDNLPKDWPRMIC---GLGLPEEVLQGVAA 259 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~Ig---Gl~~-----ge~~~~~~~~v~~~~~~Lp~~kpr~l~---G~g~P~~il~~v~~ 259 (397)
...+...+.++.|.+.|++-+-+| |++. |-..+.-.+.++.+.+.+| +.|..++ |.+...+|-.+.+.
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~-~~~i~~l~~p~~~~~~~i~~a~~a 105 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEIS-HAQIATLLLPGIGSVHDLKNAYQA 105 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCS-SSEEEEEECBTTBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCC-CCEEEEEecCCcccHHHHHHHHhC
Confidence 355666677788888888888776 3332 1111223566777777666 4555555 88899999999999
Q ss_pred CCcEEecchh
Q 015981 260 GVDLFDSAYI 269 (397)
Q Consensus 260 GvD~FD~~~p 269 (397)
|+|.+-...|
T Consensus 106 Gvd~v~I~~~ 115 (345)
T 1nvm_A 106 GARVVRVATH 115 (345)
T ss_dssp TCCEEEEEEE
T ss_pred CcCEEEEEEe
Confidence 9997654433
No 91
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=59.25 E-value=57 Score=31.53 Aligned_cols=136 Identities=13% Similarity=0.112 Sum_probs=77.4
Q ss_pred cChhhHHHHHHhcCCcEEEE-cCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe-EEeecCCCCHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWAT-LAD---EVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAV-FGSIVGGSNIEERKRCA 200 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~-L~d---~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~l-f~~iqGg~~~~lR~~sa 200 (397)
.+++...++++.+++|.... +.+ .+.+. +.......+-..++|+.+.. +-++ +-.|.+|... +-+
T Consensus 135 ~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~-g~~~~~~~~~~~i~~i~~~~-----~vPVivK~vG~g~s~----~~A 204 (368)
T 3vkj_A 135 YGLKEFQDAIQMIEADAIAVHLNPAQEVFQPE-GEPEYQIYALEKLRDISKEL-----SVPIIVKESGNGISM----ETA 204 (368)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCHHHHHHSSS-CCCBCBTHHHHHHHHHHTTC-----SSCEEEECSSSCCCH----HHH
T ss_pred CCHHHHHHHHHHhcCCCeEEEecchhhhhCCC-CCchhhHHHHHHHHHHHHHc-----CCCEEEEeCCCCCCH----HHH
Confidence 56788888898889987652 211 01111 00000001122344443211 1222 3334455553 346
Q ss_pred HHHHhcCCceEEEcCccCCCchh---h-----------------------HHHHHHHHHcCCCCCCccccc-CCCChHHH
Q 015981 201 QEVAVRNVSGYWIGGFGLGESME---E-----------------------RPSLLNAVTDNLPKDWPRMIC-GLGLPEEV 253 (397)
Q Consensus 201 ~~l~~~~~~G~~IgGl~~ge~~~---~-----------------------~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~i 253 (397)
+.+.+.|++++.++|-+ |.+.. . ....|.++.+.++ +.|.+.. |+.++.++
T Consensus 205 ~~l~~aGad~I~V~g~G-Gt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~ 282 (368)
T 3vkj_A 205 KLLYSYGIKNFDTSGQG-GTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDA 282 (368)
T ss_dssp HHHHHTTCCEEECCCBT-SBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHH
T ss_pred HHHHhCCCCEEEEeCCC-CCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHH
Confidence 77788999999998753 31110 0 0123445555665 4676655 88999999
Q ss_pred HHHHHcCCcEEecchhHHhh
Q 015981 254 LQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 254 l~~v~~GvD~FD~~~p~~~a 273 (397)
+.++.+|.|.+=..-|...+
T Consensus 283 ~kal~lGA~~v~ig~~~l~~ 302 (368)
T 3vkj_A 283 AKAIALGADIAGMALPVLKS 302 (368)
T ss_dssp HHHHHHTCSEEEECHHHHHH
T ss_pred HHHHHcCCCEEEEcHHHHHH
Confidence 99999999998888776543
No 92
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=58.60 E-value=16 Score=35.85 Aligned_cols=115 Identities=9% Similarity=0.104 Sum_probs=70.2
Q ss_pred hhHHHHHHhcCCcEE-EEcCCC-C--CCCC-----------CHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCC
Q 015981 129 VEYMEMITSMKPNLW-ATLADE-V--PAWA-----------NNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSN 192 (397)
Q Consensus 129 e~~~~~q~~i~pDi~-~~L~d~-~--~~~~-----------~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~ 192 (397)
.+.++..+..|+|++ ...... + +++. +.-+..+..+-+..|+++..+..++.+. +|..+ ++
T Consensus 47 ~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stp---fD 123 (385)
T 1vli_A 47 FALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTV---CD 123 (385)
T ss_dssp HHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBC---CS
T ss_pred HHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEcc---CC
Confidence 456777778888887 332232 1 2221 0011222223456677666554433343 34444 34
Q ss_pred HHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHH
Q 015981 193 IEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVA 258 (397)
Q Consensus 193 ~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~ 258 (397)
..+++.+.+.+++.|-||..... -..+|+++... +||.+|. |.++..+|..+++
T Consensus 124 ----~~svd~l~~~~vd~~KIgS~~~~-----N~pLL~~va~~---gKPViLStGmaTl~Ei~~Ave 178 (385)
T 1vli_A 124 ----EGSADLLQSTSPSAFKIASYEIN-----HLPLLKYVARL---NRPMIFSTAGAEISDVHEAWR 178 (385)
T ss_dssp ----HHHHHHHHTTCCSCEEECGGGTT-----CHHHHHHHHTT---CSCEEEECTTCCHHHHHHHHH
T ss_pred ----HHHHHHHHhcCCCEEEECccccc-----CHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHH
Confidence 35778888889999999864422 25677777653 8999885 9999999999984
No 93
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=57.65 E-value=18 Score=36.20 Aligned_cols=66 Identities=18% Similarity=0.218 Sum_probs=50.6
Q ss_pred HHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecc
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.++.+.+.+++.+.|..- .|. .....+.++++.+..| +.|..+-++.++.+...+.+.|+|.++..
T Consensus 241 ~a~~l~~aGvd~v~i~~~-~G~-~~~~~e~i~~i~~~~p-~~pvi~g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 241 RVEKLVKAGVDVIVIDTA-HGH-SRRVIETLEMIKADYP-DLPVVAGNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHHHTTCSEEEECCS-CCS-SHHHHHHHHHHHHHCT-TSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhCCCEEEEEec-CCc-hHHHHHHHHHHHHHCC-CceEEeCCcCCHHHHHHHHHcCCCEEEEc
Confidence 456777789999988542 343 2445678888888887 57876667889999999999999999863
No 94
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=57.51 E-value=63 Score=29.43 Aligned_cols=119 Identities=14% Similarity=0.104 Sum_probs=62.8
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhcC
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
.+++++.....|.|.++.. |... +...+|.+.+-+.. -...-.+......+ |.+.+.... .+
T Consensus 111 ~~~~~~~~~~aGadgii~~-d~~~------------e~~~~~~~~~~~~g---~~~i~l~~p~t~~~-~i~~i~~~~-~g 172 (268)
T 1qop_A 111 IDAFYARCEQVGVDSVLVA-DVPV------------EESAPFRQAALRHN---IAPIFICPPNADDD-LLRQVASYG-RG 172 (268)
T ss_dssp HHHHHHHHHHHTCCEEEET-TCCG------------GGCHHHHHHHHHTT---CEEECEECTTCCHH-HHHHHHHHC-CS
T ss_pred HHHHHHHHHHcCCCEEEEc-CCCH------------HHHHHHHHHHHHcC---CcEEEEECCCCCHH-HHHHHHhhC-CC
Confidence 3889999999999987776 3322 11234444433211 01222233323333 433222222 23
Q ss_pred CceEEEcCcc-CCCch---hhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 208 VSGYWIGGFG-LGESM---EERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 208 ~~G~~IgGl~-~ge~~---~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+ .|.+.-.+ .|... ....+.|+.+.+.. +.|..+ +|+.+|.++..++..|+|.+-.-
T Consensus 173 ~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 173 Y-TYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp C-EEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred c-EEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3 34443111 12211 12245555555554 467554 68888999999999999987655
No 95
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=57.45 E-value=17 Score=36.42 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=50.3
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecc
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++.+.+.+++.+.+++.. |. .+...+.+.++.+.+| +.|...=+++++.....++++|+|.++..
T Consensus 238 a~~l~~~G~d~ivi~~a~-g~-~~~~~~~i~~l~~~~p-~~pvi~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 238 AEALFEAGADAIVIDTAH-GH-SAGVLRKIAEIRAHFP-NRTLIAGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHTCSEEEECCSC-TT-CHHHHHHHHHHHHHCS-SSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCeEEEeeec-Cc-chhHHHHHHHHHHHCC-CCcEeCCCccCHHHHHHHHHcCCCEEEEC
Confidence 556667799999998732 43 3455677888888876 67776557889999999999999999765
No 96
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=57.18 E-value=21 Score=33.82 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=69.5
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhcC
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
.++.++.....++|++..-.. .| .+ . .+|+++ . ...++..|. ..+ -++.+.+.+
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g-~p----~~-~-------~~~l~~---~---g~~v~~~v~---s~~----~a~~a~~~G 144 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAG-NP----TK-Y-------IRELKE---N---GTKVIPVVA---SDS----LARMVERAG 144 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESS-CC----HH-H-------HHHHHH---T---TCEEEEEES---SHH----HHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECCC-Cc----HH-H-------HHHHHH---c---CCcEEEEcC---CHH----HHHHHHHcC
Confidence 377888888999999865322 22 11 1 233332 1 122554442 222 234455678
Q ss_pred CceEEEcCccC----CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHH
Q 015981 208 VSGYWIGGFGL----GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYH 271 (397)
Q Consensus 208 ~~G~~IgGl~~----ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~ 271 (397)
++++.+.|... |.. .-.+++..+.+.+ +.|.+.- |+.++.++..++++|+|.++...+..
T Consensus 145 aD~i~v~g~~~GG~~G~~--~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~ 209 (326)
T 3bo9_A 145 ADAVIAEGMESGGHIGEV--TTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFV 209 (326)
T ss_dssp CSCEEEECTTSSEECCSS--CHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCEEEEECCCCCccCCCc--cHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHH
Confidence 99998854321 311 1345566655544 4677665 88899999999999999999886543
No 97
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=56.03 E-value=6.2 Score=30.52 Aligned_cols=47 Identities=21% Similarity=0.361 Sum_probs=33.9
Q ss_pred CCCcccccccHHHHHHHhhcChhhHhHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015981 323 CCCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSRR 387 (397)
Q Consensus 323 C~C~tC~~~traYlhHLl~~~Eml~~~LL~~HNl~~~~~~~~~iR~aI~~g~l~~~~~~f~~~~~ 387 (397)
=-|+.|++-|= ..++-.+| ..+-..||+.|.+|.=++-+..|+..|+
T Consensus 24 LRCpvCqnqsI------~dSnA~iA------------~dlR~~Vre~l~~G~Sd~eI~~~mv~RY 70 (90)
T 2kw0_A 24 LRCPKCQNNSI------ADSNSMIA------------TDLRQKVYELMQEGKSKKEIVDYMVARY 70 (90)
T ss_dssp SBCSCTTSCTT------TSCCCHHH------------HHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CcCCCCCCCch------hhcCcHHH------------HHHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 35899999773 33443333 3455679999999998888888887776
No 98
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=55.60 E-value=33 Score=32.27 Aligned_cols=116 Identities=20% Similarity=0.231 Sum_probs=70.8
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhcC
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
.+++++.....|+|++..-.+ .| . ...+|+++ . .-.++..+. ..+. ++...+.+
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g-~p----~--------~~~~~l~~---~---gi~vi~~v~---t~~~----a~~~~~~G 138 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGN-DP----G--------EHIAEFRR---H---GVKVIHKCT---AVRH----ALKAERLG 138 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEES-CC----H--------HHHHHHHH---T---TCEEEEEES---SHHH----HHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEEcCC-Cc----H--------HHHHHHHH---c---CCCEEeeCC---CHHH----HHHHHHcC
Confidence 367888888999999864322 11 1 12233332 1 112444442 2222 33455678
Q ss_pred CceEEEcCccC----CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHH
Q 015981 208 VSGYWIGGFGL----GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYH 271 (397)
Q Consensus 208 ~~G~~IgGl~~----ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~ 271 (397)
++++.+.|... |.......+++..+.+.+ +.|.++- |+.+|.++..++++|+|.++...+..
T Consensus 139 aD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~ 205 (328)
T 2gjl_A 139 VDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFADGRGLVAALALGADAINMGTRFL 205 (328)
T ss_dssp CSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 99999965432 221112346677776655 5787654 78899999999999999999885543
No 99
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=55.10 E-value=31 Score=33.30 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=52.1
Q ss_pred HHHHHHhcCCceEEEcCccCCC---chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHHh
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGE---SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYHL 272 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge---~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~~ 272 (397)
-++.+.+.|++++.+++-+ |- ......+.+..+.+.++.+.|.+.. |+.++.|+..++++|+|.+=..-|...
T Consensus 238 ~a~~a~~~Gad~I~vs~~g-gr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 238 DARLAVQHGAAGIIVSNHG-ARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVF 314 (370)
T ss_dssp HHHHHHHTTCSEEEECCGG-GTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHcCCCEEEECCCC-CccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHH
Confidence 3566677899999996633 21 0112355666677777767777654 899999999999999998887766544
No 100
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=54.77 E-value=27 Score=33.07 Aligned_cols=116 Identities=14% Similarity=0.194 Sum_probs=69.9
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhcC
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
.++.++.....|+|++..-.. .|. + ..+++++ . .-.++..|. ..+ -++.+.+.+
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g-~p~-----~-------~i~~l~~---~---g~~v~~~v~---~~~----~a~~~~~~G 130 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAG-NPS-----K-------YMERFHE---A---GIIVIPVVP---SVA----LAKRMEKIG 130 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSS-CGG-----G-------THHHHHH---T---TCEEEEEES---SHH----HHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECCC-ChH-----H-------HHHHHHH---c---CCeEEEEeC---CHH----HHHHHHHcC
Confidence 467888888999999876433 221 0 1222221 1 122454442 222 244566678
Q ss_pred CceEEEcCccCC-Cc-hhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHH
Q 015981 208 VSGYWIGGFGLG-ES-MEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYH 271 (397)
Q Consensus 208 ~~G~~IgGl~~g-e~-~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~ 271 (397)
++++.+.|...| .. .....+++..+.+.+ +.|.+.- |+.+|.++..++.+|+|.++..-+..
T Consensus 131 aD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l 195 (332)
T 2z6i_A 131 ADAVIAEGMEAGGHIGKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFV 195 (332)
T ss_dssp CSCEEEECTTSSEECCSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCEEEEECCCCCCCCCCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHh
Confidence 999998654211 10 112245666665554 4677654 78899999999999999999886543
No 101
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=53.58 E-value=30 Score=30.32 Aligned_cols=67 Identities=12% Similarity=0.129 Sum_probs=47.2
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecch
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
++.+.+.+.+.+.++........+...++++.+.+.+| +.+. +.++.++.+...+.+.|+|.+-...
T Consensus 81 i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~-~~~v-~~~~~t~~e~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 81 VDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAP-NVEI-MADIATVEEAKNAARLGFDYIGTTL 147 (223)
T ss_dssp HHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCT-TSEE-EEECSSHHHHHHHHHTTCSEEECTT
T ss_pred HHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCC-CceE-EecCCCHHHHHHHHHcCCCEEEeCC
Confidence 44556678899888764422111345677888887775 4554 4588899999999999999987553
No 102
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=53.18 E-value=63 Score=29.16 Aligned_cols=82 Identities=17% Similarity=0.140 Sum_probs=51.7
Q ss_pred CeEEee-cCCCCHHHHHHHHHHHHhcCCceEEEcCc-------------------cCCCchhhHHHHHHHHHcCCCCCCc
Q 015981 182 AVFGSI-VGGSNIEERKRCAQEVAVRNVSGYWIGGF-------------------GLGESMEERPSLLNAVTDNLPKDWP 241 (397)
Q Consensus 182 ~lf~~i-qGg~~~~lR~~sa~~l~~~~~~G~~IgGl-------------------~~ge~~~~~~~~v~~~~~~Lp~~kp 241 (397)
.+.+.+ -|..+.+.-.+.++.+.+.|++.+-+|.- ..|.+.+...++++.+.+. .+.|
T Consensus 19 ~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~--~~~P 96 (262)
T 1rd5_A 19 AFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE--LSCP 96 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG--CSSC
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CCCC
Confidence 344444 44444555556677888889999988631 1223344556778887776 3688
Q ss_pred ccccCCCChHH---HHHHHHcCCcEEe
Q 015981 242 RMICGLGLPEE---VLQGVAAGVDLFD 265 (397)
Q Consensus 242 r~l~G~g~P~~---il~~v~~GvD~FD 265 (397)
.++|+..+|.. +-.+.+.|+|.+-
T Consensus 97 v~~m~~~~~~~~~~~~~a~~aGadgv~ 123 (262)
T 1rd5_A 97 VVLLSYYKPIMFRSLAKMKEAGVHGLI 123 (262)
T ss_dssp EEEECCSHHHHSCCTHHHHHTTCCEEE
T ss_pred EEEEecCcHHHHHHHHHHHHcCCCEEE
Confidence 88887556532 3348899999443
No 103
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=52.73 E-value=34 Score=32.45 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=47.1
Q ss_pred HHHHHHHhcCCceEEEcCccCCC---chhh--------HHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEe
Q 015981 198 RCAQEVAVRNVSGYWIGGFGLGE---SMEE--------RPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 198 ~sa~~l~~~~~~G~~IgGl~~ge---~~~~--------~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD 265 (397)
+-++.+.+.|++++.+++-+ |- ...+ ..+.+.++.+.+ +.|.+.- |+.++.|++.++++|+|..=
T Consensus 161 e~A~~a~~aGad~Ivvs~hg-G~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~ 237 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGP-GKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIRFGATMVM 237 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSC-STTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEecCC-CceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 35667778899999995432 21 0001 245566666655 5676544 99999999999999999776
Q ss_pred cchhH
Q 015981 266 SAYIY 270 (397)
Q Consensus 266 ~~~p~ 270 (397)
..-+.
T Consensus 238 iGr~~ 242 (336)
T 1ypf_A 238 IGSLF 242 (336)
T ss_dssp ESGGG
T ss_pred eChhh
Confidence 65443
No 104
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=51.75 E-value=51 Score=30.61 Aligned_cols=83 Identities=14% Similarity=-0.002 Sum_probs=51.6
Q ss_pred CeEEeecCCCCHHHHHHHHHHHHhcCCc---eEEEcCc--------cCCCchhhHHHHHHHHHcCCCCCCccccc-CC-C
Q 015981 182 AVFGSIVGGSNIEERKRCAQEVAVRNVS---GYWIGGF--------GLGESMEERPSLLNAVTDNLPKDWPRMIC-GL-G 248 (397)
Q Consensus 182 ~lf~~iqGg~~~~lR~~sa~~l~~~~~~---G~~IgGl--------~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~-g 248 (397)
.+++.| +|...+.-.++++.+.+.+++ ++-|.-. ..|.+++...++++++.+.+ +.|..+- .. .
T Consensus 95 p~~~~i-~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK~~~~~ 171 (314)
T 2e6f_A 95 PLFLSI-SGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVKMPPYF 171 (314)
T ss_dssp CEEEEE-CCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEEECCCC
T ss_pred cEEEEe-CCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCCC
Confidence 355555 456666667788888777788 6776421 12335556677888777665 4676542 22 2
Q ss_pred ChHHH----HHHHHcC-CcEEecc
Q 015981 249 LPEEV----LQGVAAG-VDLFDSA 267 (397)
Q Consensus 249 ~P~~i----l~~v~~G-vD~FD~~ 267 (397)
++.++ -.+.+.| +|.++..
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCceEEEEe
Confidence 55564 3446799 9998765
No 105
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=51.06 E-value=24 Score=32.00 Aligned_cols=59 Identities=17% Similarity=0.159 Sum_probs=45.7
Q ss_pred HHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCC-ChHHHHHHHHcCCcEEe
Q 015981 197 KRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLG-LPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g-~P~~il~~v~~GvD~FD 265 (397)
.+.++.+.+.|.+.+-||| +.|.+.+...++++.+.+ .+.|..+|+-. +|. ..|+|-+=
T Consensus 23 ~~~~~~l~~~GaD~IelG~-S~g~t~~~~~~~v~~ir~---~~~Pivl~~y~~n~i------~~gvDg~i 82 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISG-TQNVTYEKARTLIEKVSQ---YGLPIVVEPSDPSNV------VYDVDYLF 82 (234)
T ss_dssp HHHHHHHHTTTCSEEEECC-CTTCCHHHHHHHHHHHTT---SCCCEEECCSSCCCC------CCCSSEEE
T ss_pred HHHHHHHHHcCCCEEEECC-CCCCCHHHHHHHHHHhcC---CCCCEEEecCCcchh------hcCCCEEE
Confidence 3456788888999999988 778787778888888876 37999999777 554 67888543
No 106
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=49.32 E-value=35 Score=32.75 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=68.9
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhcC
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
.++.++.....++|++..-... + +.+ ..+++++ . .-.++..+. ..+ -++.+.+.+
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~-~---~~~--------~i~~~~~---~---g~~v~~~v~---t~~----~a~~a~~~G 165 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGV-P---DRE--------VIARLRR---A---GTLTLVTAT---TPE----EARAVEAAG 165 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSC-C---CHH--------HHHHHHH---T---TCEEEEEES---SHH----HHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEEeCCC-C---cHH--------HHHHHHH---C---CCeEEEECC---CHH----HHHHHHHcC
Confidence 3778888899999998654222 2 111 1222222 1 112444442 222 244555678
Q ss_pred CceEEEcCcc----CCCch---------hhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhH
Q 015981 208 VSGYWIGGFG----LGESM---------EERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIY 270 (397)
Q Consensus 208 ~~G~~IgGl~----~ge~~---------~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~ 270 (397)
++++.+.|.. .|... ....+++..+.+.+ +.|.+.- |+.+|.++..++++|+|.++..-+.
T Consensus 166 aD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~ 240 (369)
T 3bw2_A 166 ADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAF 240 (369)
T ss_dssp CSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred CCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--CceEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 9999884321 12110 11255666666544 5677665 6889999999999999999987554
No 107
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=48.57 E-value=1.1e+02 Score=33.48 Aligned_cols=84 Identities=12% Similarity=0.071 Sum_probs=57.7
Q ss_pred CeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCcc------------CCCchhhHHHHHHHHHcCCCCCCcccc---cC
Q 015981 182 AVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFG------------LGESMEERPSLLNAVTDNLPKDWPRMI---CG 246 (397)
Q Consensus 182 ~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~------------~ge~~~~~~~~v~~~~~~Lp~~kpr~l---~G 246 (397)
.+++.+-+|.+.+.-.++++.+.+.+++++.|..-. ++.+.+...++++++.+.. +.|..+ .+
T Consensus 636 ~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~--~~Pv~vK~~~~ 713 (1025)
T 1gte_A 636 IVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV--QIPFFAKLTPN 713 (1025)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC--SSCEEEEECSC
T ss_pred CeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh--CCceEEEeCCC
Confidence 456666677888888888888888899999884221 1234455677888887765 467654 34
Q ss_pred CCChHHHHHH-HHcCCcEEecc
Q 015981 247 LGLPEEVLQG-VAAGVDLFDSA 267 (397)
Q Consensus 247 ~g~P~~il~~-v~~GvD~FD~~ 267 (397)
+.+..++..+ .+.|+|.++.+
T Consensus 714 ~~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 714 VTDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp SSCHHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHHHHcCCCEEEEe
Confidence 5556666555 57999999884
No 108
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=48.41 E-value=1.5e+02 Score=28.05 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 226 PSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 226 ~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.++|..+...++ +.|..-. ||.++.|.++.+..|+|.+-.-
T Consensus 265 ~~~v~~~~~~~~-~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~ 306 (354)
T 3tjx_A 265 LANINAFYRRCP-GKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp HHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHHHHhcC-CCcEEEeCCcCCHHHHHHHHHcCCCEEEEC
Confidence 556666666665 4665433 7889999999999999987654
No 109
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=48.16 E-value=73 Score=29.44 Aligned_cols=122 Identities=9% Similarity=-0.017 Sum_probs=75.2
Q ss_pred cC-CC--ceecChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCC--CCH
Q 015981 119 TP-CG--RRLIKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGG--SNI 193 (397)
Q Consensus 119 s~-~G--~~~ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg--~~~ 193 (397)
|| .| +..++|.++.+..+.-|++.+-.++|+.-..-+.+.++.. . +.. + .+++-.. .++
T Consensus 69 SPSkG~i~~~~dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~i-r----------~~v--~---lPVl~Kdfi~d~ 132 (272)
T 3tsm_A 69 SPSKGLIRPDFDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAA-R----------QAC--S---LPALRKDFLFDP 132 (272)
T ss_dssp ETTTEESCSSCCHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHH-H----------HTS--S---SCEEEESCCCST
T ss_pred CCCCCccCCCCCHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHH-H----------Hhc--C---CCEEECCccCCH
Confidence 45 46 4578999999999999999998887655443344333221 1 110 0 1222222 222
Q ss_pred HHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 194 EERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 194 ~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
. -+.+....|.+++.++--.+ +.++..++++.+... . .-.+.-+-+..++..+..+|.|++=.
T Consensus 133 ~----qi~ea~~~GAD~VlLi~a~L--~~~~l~~l~~~a~~l-G---l~~lvevh~~eEl~~A~~~ga~iIGi 195 (272)
T 3tsm_A 133 Y----QVYEARSWGADCILIIMASV--DDDLAKELEDTAFAL-G---MDALIEVHDEAEMERALKLSSRLLGV 195 (272)
T ss_dssp H----HHHHHHHTTCSEEEEETTTS--CHHHHHHHHHHHHHT-T---CEEEEEECSHHHHHHHTTSCCSEEEE
T ss_pred H----HHHHHHHcCCCEEEEccccc--CHHHHHHHHHHHHHc-C---CeEEEEeCCHHHHHHHHhcCCCEEEE
Confidence 2 14455678999998875433 335566676665542 1 12244578999999999999998843
No 110
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=47.72 E-value=96 Score=27.27 Aligned_cols=122 Identities=15% Similarity=0.162 Sum_probs=65.2
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEe-ecCCCCHHHHHHHHHHHHh
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGS-IVGGSNIEERKRCAQEVAV 205 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~-iqGg~~~~lR~~sa~~l~~ 205 (397)
.|+++++.....|+|.+..-.+..+. . +.+..+.++ +. +..+++ +-.....+ + ++.+.+
T Consensus 75 d~~~~i~~~~~agad~v~vH~~~~~~--~-------~~~~~~~i~---~~----g~~igv~~~p~t~~e-~---~~~~~~ 134 (228)
T 1h1y_A 75 NPSDYVEPLAKAGASGFTFHIEVSRD--N-------WQELIQSIK---AK----GMRPGVSLRPGTPVE-E---VFPLVE 134 (228)
T ss_dssp CGGGGHHHHHHHTCSEEEEEGGGCTT--T-------HHHHHHHHH---HT----TCEEEEEECTTSCGG-G---GHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEECCCCccc--H-------HHHHHHHHH---Hc----CCCEEEEEeCCCCHH-H---HHHHHh
Confidence 45778888888999999776454332 1 011222221 11 222333 32233322 2 223333
Q ss_pred c--CCceEEEcCccC---CCch-hhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 206 R--NVSGYWIGGFGL---GESM-EERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 206 ~--~~~G~~IgGl~~---ge~~-~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
. +.+.+.++.... |... ....+-++.+.+..+ +.|..+-|==++.++..++..|+|.|-....
T Consensus 135 ~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~-~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsa 203 (228)
T 1h1y_A 135 AENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP-SLDIEVDGGLGPSTIDVAASAGANCIVAGSS 203 (228)
T ss_dssp SSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TSEEEEESSCSTTTHHHHHHHTCCEEEESHH
T ss_pred cCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC-CCCEEEECCcCHHHHHHHHHcCCCEEEECHH
Confidence 3 566666644332 2211 222344555555554 5676655444579999999999999987743
No 111
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=47.37 E-value=51 Score=31.22 Aligned_cols=81 Identities=12% Similarity=-0.047 Sum_probs=53.8
Q ss_pred ecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCC-----chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC
Q 015981 187 IVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGE-----SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG 260 (397)
Q Consensus 187 iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge-----~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G 260 (397)
+.||.+.+.-.+.++.+.+.+++.+-+.+....+ ......+.+..+.+.+ +.|...- |+.+|+++..+++.|
T Consensus 222 ~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G 299 (338)
T 1z41_A 222 TDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNG 299 (338)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcC
Confidence 3567887766777888888999998886532100 1111234455555544 4676655 556899999999999
Q ss_pred -CcEEecchh
Q 015981 261 -VDLFDSAYI 269 (397)
Q Consensus 261 -vD~FD~~~p 269 (397)
+|++=..-+
T Consensus 300 ~aD~V~iGR~ 309 (338)
T 1z41_A 300 RADLIFIGRE 309 (338)
T ss_dssp SCSEEEECHH
T ss_pred CceEEeecHH
Confidence 998866544
No 112
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=47.15 E-value=58 Score=32.88 Aligned_cols=129 Identities=11% Similarity=0.107 Sum_probs=77.1
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCCHHHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEV--PAWANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSNIEERKRCAQE 202 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~--~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~~~lR~~sa~~ 202 (397)
.+.++..+....-+...+...|+.- -.-.+.+.+.+.++.. . ......+. +.++-.|.....+ + -++.
T Consensus 193 ~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p----~---a~~D~~~rl~V~aavg~~~d~~-e-ra~a 263 (511)
T 3usb_A 193 TTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFP----N---SAKDKQGRLLVGAAVGVTADAM-T-RIDA 263 (511)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCT----T---CCBCTTSCBCCEEEECSSTTHH-H-HHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcc----c---chhhhccceeeeeeeeeccchH-H-HHHH
Confidence 4566777777777777776664421 1113444444433210 0 00011122 3444444333222 2 2556
Q ss_pred HHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 203 VAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 203 l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
+.+.+++.+.|..-. +. .....+.|+++.+..| +.|..+-++.++.+...+++.|+|.+..
T Consensus 264 LveaGvd~I~Id~a~-g~-~~~v~~~i~~i~~~~~-~~~vi~g~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 264 LVKASVDAIVLDTAH-GH-SQGVIDKVKEVRAKYP-SLNIIAGNVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHTTCSEEEEECSC-TT-SHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHhhccceEEecccc-cc-hhhhhhHHHHHHHhCC-CceEEeeeeccHHHHHHHHHhCCCEEEE
Confidence 777899999887543 32 2445678888888886 4677666899999999999999999973
No 113
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=46.38 E-value=29 Score=31.22 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=63.0
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEee-cCCCCHHHHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADE-VPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSI-VGGSNIEERKRCAQEV 203 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~-~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~i-qGg~~~~lR~~sa~~l 203 (397)
.+|+.|++.....|+|++....+. ++ . ++|+++..++. +...|+. -.+...+. ++.+
T Consensus 67 ~dp~~~i~~~~~aGAd~itvh~Ea~~~---~-------~~~~i~~i~~~-------G~k~gv~lnp~tp~~~----~~~~ 125 (231)
T 3ctl_A 67 TRPQDYIAQLARAGADFITLHPETING---Q-------AFRLIDEIRRH-------DMKVGLILNPETPVEA----MKYY 125 (231)
T ss_dssp SCGGGTHHHHHHHTCSEEEECGGGCTT---T-------HHHHHHHHHHT-------TCEEEEEECTTCCGGG----GTTT
T ss_pred cCHHHHHHHHHHcCCCEEEECcccCCc---c-------HHHHHHHHHHc-------CCeEEEEEECCCcHHH----HHHH
Confidence 367889999999999999877554 21 1 33455444431 3323333 33333221 2222
Q ss_pred HhcCCceEEEc-------CccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecc
Q 015981 204 AVRNVSGYWIG-------GFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 204 ~~~~~~G~~Ig-------Gl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.+ +++-+.+- |-...++..+..+.++...+.-..+.+..+-|==++..+..+++.|+|+|-.-
T Consensus 126 l~-~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 126 IH-KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp GG-GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred Hh-cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 22 34444332 22222222222233333332111134444555557999999999999999865
No 114
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=44.70 E-value=75 Score=30.56 Aligned_cols=66 Identities=12% Similarity=0.086 Sum_probs=47.8
Q ss_pred HHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 197 KRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
.+-++.+.+.+++.+.|.. ..|.+ +...+.++++.+.+ +.|..+-++.++.+...+++.|+|.+..
T Consensus 107 ~e~a~~l~eaGad~I~ld~-a~G~~-~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDS-AHGHS-LNIIRTLKEIKSKM--NIDVIVGNVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECC-SCCSB-HHHHHHHHHHHHHC--CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeC-CCCCc-HHHHHHHHHHHHhc--CCcEEEccCCCHHHHHHHHHcCcCEEEE
Confidence 3446667778999888752 33443 44566777777766 4565554788999999999999999986
No 115
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=44.44 E-value=47 Score=31.83 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=50.6
Q ss_pred EEeecCCCCHHHHHHHHHHHHhc--CCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCC
Q 015981 184 FGSIVGGSNIEERKRCAQEVAVR--NVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGV 261 (397)
Q Consensus 184 f~~iqGg~~~~lR~~sa~~l~~~--~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~Gv 261 (397)
+++-+|. ..+...+ ++.+.+. +++.+.+.. ..|. .....+.|+++.+..| +.|..+-++.++++...+++.|+
T Consensus 109 v~~~~g~-~~~~~~~-~~~l~~~~~g~~~i~i~~-~~g~-~~~~~~~i~~lr~~~~-~~~vi~g~v~t~e~A~~a~~aGa 183 (351)
T 2c6q_A 109 LAASSGT-GSSDFEQ-LEQILEAIPQVKYICLDV-ANGY-SEHFVEFVKDVRKRFP-QHTIMAGNVVTGEMVEELILSGA 183 (351)
T ss_dssp EEEEECS-SHHHHHH-HHHHHHHCTTCCEEEEEC-SCTT-BHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHTTC
T ss_pred eEeecCC-ChHHHHH-HHHHHhccCCCCEEEEEe-cCCC-cHHHHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHHhCC
Confidence 4444453 3332222 3444443 677666642 2233 2446778888888876 56765556889999999999999
Q ss_pred cEEecc
Q 015981 262 DLFDSA 267 (397)
Q Consensus 262 D~FD~~ 267 (397)
|.++..
T Consensus 184 D~I~v~ 189 (351)
T 2c6q_A 184 DIIKVG 189 (351)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999775
No 116
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=44.32 E-value=27 Score=32.39 Aligned_cols=117 Identities=14% Similarity=0.093 Sum_probs=66.7
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHh
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAV 205 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~ 205 (397)
+++.++.+ ....|+|.+....-.. +.+.++.-++...+ . .-..+.-|+ +.+.-. ...+
T Consensus 130 ~d~~qi~e-a~~~GAD~VlLi~a~L----~~~~l~~l~~~a~~-------l---Gl~~lvevh---~~eEl~----~A~~ 187 (272)
T 3tsm_A 130 FDPYQVYE-ARSWGADCILIIMASV----DDDLAKELEDTAFA-------L---GMDALIEVH---DEAEME----RALK 187 (272)
T ss_dssp CSTHHHHH-HHHTTCSEEEEETTTS----CHHHHHHHHHHHHH-------T---TCEEEEEEC---SHHHHH----HHTT
T ss_pred CCHHHHHH-HHHcCCCEEEEccccc----CHHHHHHHHHHHHH-------c---CCeEEEEeC---CHHHHH----HHHh
Confidence 45555444 5789999987764432 22333333333321 1 111334443 332222 2335
Q ss_pred cCCceEEEcCccC---CCchhhHHHHHHHHHcCCCCCCccc-ccCCCChHHHHHHHHcCCcEEecch
Q 015981 206 RNVSGYWIGGFGL---GESMEERPSLLNAVTDNLPKDWPRM-ICGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 206 ~~~~G~~IgGl~~---ge~~~~~~~~v~~~~~~Lp~~kpr~-l~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
.+++-+.+..-.+ ..+.+. .....+.+|.+.|.. -.|+.+|.++..+...|+|-|-..-
T Consensus 188 ~ga~iIGinnr~l~t~~~dl~~----~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~ 250 (272)
T 3tsm_A 188 LSSRLLGVNNRNLRSFEVNLAV----SERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGE 250 (272)
T ss_dssp SCCSEEEEECBCTTTCCBCTHH----HHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECH
T ss_pred cCCCEEEECCCCCccCCCChHH----HHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 6777666654332 122222 333445778888865 4699999999999999999887653
No 117
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=44.10 E-value=37 Score=34.41 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=48.5
Q ss_pred HHHHHHhcCCceEEEcCccCCCch---hhHHHHHHHHHcCC-----CCCCccccc-CCCChHHHHHHHHcCCcEEecchh
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESM---EERPSLLNAVTDNL-----PKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~---~~~~~~v~~~~~~L-----p~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
-++.+.+.|++++.++|-+ |... ....+.+..+.+.+ ..+.|.+.. |+.++.|++.++++|+|.+=..-|
T Consensus 356 ~A~~a~~aGad~I~vs~hg-G~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~ 434 (511)
T 1kbi_A 356 DVIKAAEIGVSGVVLSNHG-GRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRP 434 (511)
T ss_dssp HHHHHHHTTCSEEEECCTT-TTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHcCCCEEEEcCCC-CccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 3666778899999997643 2111 11133444444333 234566654 889999999999999998877766
Q ss_pred HHhh
Q 015981 270 YHLT 273 (397)
Q Consensus 270 ~~~a 273 (397)
...+
T Consensus 435 ~l~~ 438 (511)
T 1kbi_A 435 FLYA 438 (511)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 118
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=43.73 E-value=49 Score=29.47 Aligned_cols=67 Identities=21% Similarity=0.204 Sum_probs=43.1
Q ss_pred HHHHHhcCCceEEEcCccC-CCchhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecch
Q 015981 200 AQEVAVRNVSGYWIGGFGL-GESMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~-ge~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
++.+.+.+++.+.+-+... |.....-.+.++.+.+.+ +.|.+. -|+++|.++..+.+.|+|.+=...
T Consensus 157 ~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGs 225 (253)
T 1thf_D 157 VVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAAS 225 (253)
T ss_dssp HHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHH
Confidence 4555567888887754331 110001145566666554 567765 489999999999999999876553
No 119
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=43.47 E-value=1e+02 Score=30.72 Aligned_cols=118 Identities=15% Similarity=0.075 Sum_probs=64.6
Q ss_pred ecChhhHHHHHHhcCCcEE-EEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHH
Q 015981 125 LIKPVEYMEMITSMKPNLW-ATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEV 203 (397)
Q Consensus 125 ~ltpe~~~~~q~~i~pDi~-~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l 203 (397)
.+..++=++....+|+||+ +-.-+-.+... .+++|.+-+... + ....-+-.||.+.. +-++.+
T Consensus 163 Evh~~eE~~~A~~lga~iIGinnr~L~t~~~-------dl~~~~~L~~~i----p--~~~~vIaEsGI~t~---edv~~~ 226 (452)
T 1pii_A 163 EVSNEEEQERAIALGAKVVGINNRDLRDLSI-------DLNRTRELAPKL----G--HNVTVISESGINTY---AQVREL 226 (452)
T ss_dssp EECSHHHHHHHHHTTCSEEEEESEETTTTEE-------CTHHHHHHHHHH----C--TTSEEEEESCCCCH---HHHHHH
T ss_pred EeCCHHHHHHHHHCCCCEEEEeCCCCCCCCC-------CHHHHHHHHHhC----C--CCCeEEEECCCCCH---HHHHHH
Confidence 4444555555566788886 33323222211 244455444332 1 12455667777632 123456
Q ss_pred HhcCCceEEEcCcc-CCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecc
Q 015981 204 AVRNVSGYWIGGFG-LGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 204 ~~~~~~G~~IgGl~-~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.+. ++|+.||.-- -..++ .+.++..... + .=+.|+-+|+++..++++|+|..=-.
T Consensus 227 ~~~-a~avLVGealmr~~d~---~~~~~~l~~~----~-~KICGit~~eda~~a~~~Gad~iGfI 282 (452)
T 1pii_A 227 SHF-ANGFLIGSALMAHDDL---HAAVRRVLLG----E-NKVCGLTRGQDAKAAYDAGAIYGGLI 282 (452)
T ss_dssp TTT-CSEEEECHHHHTCSCH---HHHHHHHHHC----S-CEECCCCSHHHHHHHHHHTCSEEEEE
T ss_pred HHh-CCEEEEcHHHcCCcCH---HHHHHHHHHH----h-ccccCCCcHHHHHHHHhcCCCEEEee
Confidence 677 9999997521 11222 2233332221 1 12889999999999999999975444
No 120
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=43.38 E-value=26 Score=31.67 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=40.8
Q ss_pred HHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcE
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDL 263 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~ 263 (397)
.++.+.+.|.+.+.||| +.|-+.+...++++.+.+ .+.|.+++ .++|..+ ..|+|-
T Consensus 23 ~~~~~~~~GtD~i~vGG-s~gvt~~~~~~~v~~ik~---~~~Pvvlf-p~~~~~v----~~gaD~ 78 (228)
T 3vzx_A 23 QLEILCESGTDAVIIGG-SDGVTEDNVLRMMSKVRR---FLVPCVLE-VSAIEAI----VPGFDL 78 (228)
T ss_dssp HHHHHHTSSCSEEEECC-CSCCCHHHHHHHHHHHTT---SSSCEEEE-CSCGGGC----CSCCSE
T ss_pred HHHHHHHcCCCEEEECC-cCCCCHHHHHHHHHHhhc---cCCCEEEe-CCCHHHc----cccCCE
Confidence 44556788999999999 556666778888888776 37899887 4557544 357773
No 121
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=43.17 E-value=56 Score=28.79 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=46.6
Q ss_pred HHHHHHhcCCceEEEcCccCCCch-hhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEe
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESM-EERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~-~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD 265 (397)
.++.+.+.|.+.+.++........ ....++++.+.+..| +.+ .+.++.++.+...+...|+|.+.
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~-~~~-v~~~~~t~~ea~~a~~~Gad~i~ 158 (234)
T 1yxy_A 93 EVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYP-NQL-LMADISTFDEGLVAHQAGIDFVG 158 (234)
T ss_dssp HHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCT-TCE-EEEECSSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCC-CCe-EEEeCCCHHHHHHHHHcCCCEEe
Confidence 356667789999988775433211 234577777777775 444 45588999999999999999994
No 122
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=43.15 E-value=30 Score=31.46 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=42.5
Q ss_pred HHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEE
Q 015981 197 KRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLF 264 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~F 264 (397)
.+.++.+.+.|.+.+.||| +.|...+...++++.+.+ .+.|.+++ .++|..+ ..|+|-+
T Consensus 26 ~~~l~~~~~~GtDaI~vGg-s~gvt~~~~~~~v~~ik~---~~~Piil~-p~~~~~~----~~gaD~i 84 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIGG-TDDVTEDNVIHLMSKIRR---YPLPLVLE-ISNIESV----MPGFDFY 84 (235)
T ss_dssp HHHHHHHHTSSCSEEEECC-SSCCCHHHHHHHHHHHTT---SCSCEEEE-CCCSTTC----CTTCSEE
T ss_pred HHHHHHHHHcCCCEEEECC-cCCcCHHHHHHHHHHhcC---cCCCEEEe-cCCHHHh----hcCCCEE
Confidence 3455567788999999998 567777778888888876 36898887 3356443 4588743
No 123
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=43.14 E-value=50 Score=33.23 Aligned_cols=72 Identities=14% Similarity=0.076 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCceEEEcCccCCC------------ch-hhHHHHHHHHHcC---CCCCCccccc--CCCChHHHHHHHH
Q 015981 197 KRCAQEVAVRNVSGYWIGGFGLGE------------SM-EERPSLLNAVTDN---LPKDWPRMIC--GLGLPEEVLQGVA 258 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~IgGl~~ge------------~~-~~~~~~v~~~~~~---Lp~~kpr~l~--G~g~P~~il~~v~ 258 (397)
.+.++.+.+.++++..+ |.+.|. +. ....++.+++... ...+.|. +. |+.+|.+|..|++
T Consensus 295 ~~~a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipv-ia~GGi~~~~di~kAla 372 (503)
T 1me8_A 295 GEGFRYLADAGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPV-CSDGGIVYDYHMTLALA 372 (503)
T ss_dssp HHHHHHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCE-EEESCCCSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceE-EEeCCCCCHHHHHHHHH
Confidence 34566777889999988 665431 11 1122333222211 0012343 44 9999999999999
Q ss_pred cCCcEEecchhH
Q 015981 259 AGVDLFDSAYIY 270 (397)
Q Consensus 259 ~GvD~FD~~~p~ 270 (397)
+|+|..=..-+.
T Consensus 373 lGA~~V~iG~~~ 384 (503)
T 1me8_A 373 MGADFIMLGRYF 384 (503)
T ss_dssp TTCSEEEESHHH
T ss_pred cCCCEEEECchh
Confidence 999977665443
No 124
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=42.35 E-value=1e+02 Score=26.81 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=45.6
Q ss_pred HHHHHHHhcCCceEEEcCccCC-CchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 198 RCAQEVAVRNVSGYWIGGFGLG-ESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 198 ~sa~~l~~~~~~G~~IgGl~~g-e~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+.++.+.+.|++.+.+...... .......+.++.+.+.. +.|..+. |+.+|.++..+++.|+|.+...
T Consensus 37 ~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 37 EMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVN 106 (253)
T ss_dssp HHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3456666778888877644321 12223356666666654 4676654 6889999999999999998854
No 125
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=41.93 E-value=62 Score=31.42 Aligned_cols=70 Identities=16% Similarity=0.239 Sum_probs=43.6
Q ss_pred HHHHHHhcCCceEEEcCccCCC----------chhhHHHHHHHHHcCCC-CCCccccc-CCCChHHHHHHHHcCCcEEec
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGE----------SMEERPSLLNAVTDNLP-KDWPRMIC-GLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge----------~~~~~~~~v~~~~~~Lp-~~kpr~l~-G~g~P~~il~~v~~GvD~FD~ 266 (397)
-++.+.+.|++++.+|+ ..|. .... ...+..+.+.++ .+.|.+.. |+.+|.++..++++|+|.+=.
T Consensus 207 ~a~~a~~~Gad~I~vg~-~~G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 207 AALDLISVGADCLKVGI-GPGSICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp HHHHHHTTTCSEEEECS-SCSTTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhcCCCEEEECC-CCCcCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhh
Confidence 45566678999999932 2110 0011 233334443332 24665543 899999999999999998877
Q ss_pred chhH
Q 015981 267 AYIY 270 (397)
Q Consensus 267 ~~p~ 270 (397)
.-+.
T Consensus 285 G~~~ 288 (404)
T 1eep_A 285 GNLF 288 (404)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 6554
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=41.75 E-value=62 Score=32.51 Aligned_cols=68 Identities=16% Similarity=0.232 Sum_probs=44.6
Q ss_pred HHHHHHhcCCceEEEcCccC------------CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEe
Q 015981 199 CAQEVAVRNVSGYWIGGFGL------------GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~------------ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD 265 (397)
.++.+.+.|++++.+ |.+. |.........+..+.+.. +.|.+.. |+.+|.++..++++|+|.+=
T Consensus 309 ~a~~l~~aGad~I~v-g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~GGI~~~~di~kala~GAd~V~ 385 (514)
T 1jcn_A 309 QAKNLIDAGVDGLRV-GMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADGGIQTVGHVVKALALGASTVM 385 (514)
T ss_dssp HHHHHHHHTCSEEEE-CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEE-CCCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEECCCCCHHHHHHHHHcCCCeee
Confidence 366677789999988 3321 221222344555555543 4665543 88999999999999999876
Q ss_pred cchh
Q 015981 266 SAYI 269 (397)
Q Consensus 266 ~~~p 269 (397)
..-+
T Consensus 386 iG~~ 389 (514)
T 1jcn_A 386 MGSL 389 (514)
T ss_dssp ESTT
T ss_pred ECHH
Confidence 6543
No 127
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=41.48 E-value=24 Score=34.26 Aligned_cols=71 Identities=14% Similarity=0.154 Sum_probs=45.8
Q ss_pred HHHHHHhcCCceEEEcCccCCC--chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchhHH
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGE--SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYIYH 271 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge--~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p~~ 271 (397)
-++.+.+.|++++.++|.+... ......+.+..+.+.++. |.+.. |+.++.++..++++|+|.+=..-|..
T Consensus 238 ~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~--pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l 311 (380)
T 1p4c_A 238 DADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGK--PVLIDSGFRRGSDIVKALALGAEAVLLGRATL 311 (380)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCS--CEEECSSCCSHHHHHHHHHTTCSCEEESHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCC--eEEEECCCCCHHHHHHHHHhCCcHhhehHHHH
Confidence 4666778899999996643100 000012334444444432 76655 88999999999999999877665543
No 128
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=41.26 E-value=93 Score=29.58 Aligned_cols=82 Identities=16% Similarity=0.129 Sum_probs=52.1
Q ss_pred eEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCcc---------CC----CchhhHHHHHHHHHcCCCCCCcccc---cC
Q 015981 183 VFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFG---------LG----ESMEERPSLLNAVTDNLPKDWPRMI---CG 246 (397)
Q Consensus 183 lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~---------~g----e~~~~~~~~v~~~~~~Lp~~kpr~l---~G 246 (397)
++.-+ +|.+++.-.++++.+.+.|++++-|.+=+ .| ..++...++|+++.+.+ +.|..+ +|
T Consensus 60 ~~vQL-~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v--~~PV~vKiR~g 136 (350)
T 3b0p_A 60 IALQL-AGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV--RVPVTVKMRLG 136 (350)
T ss_dssp EEEEE-ECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--SSCEEEEEESC
T ss_pred EEEEe-CCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--CCceEEEEecC
Confidence 33333 45677777788888888899999886411 11 23344567777777665 567554 45
Q ss_pred CCC------hHHHH-HHHHcCCcEEecc
Q 015981 247 LGL------PEEVL-QGVAAGVDLFDSA 267 (397)
Q Consensus 247 ~g~------P~~il-~~v~~GvD~FD~~ 267 (397)
... ..++. .+.+.|+|.+...
T Consensus 137 ~~~~~~~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 137 LEGKETYRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp BTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCccccHHHHHHHHHHHHHcCCCEEEEe
Confidence 543 23333 4457999999875
No 129
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=40.91 E-value=1.9e+02 Score=25.44 Aligned_cols=116 Identities=9% Similarity=-0.033 Sum_probs=61.1
Q ss_pred hhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhcCC
Q 015981 129 VEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRNV 208 (397)
Q Consensus 129 e~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~~~ 208 (397)
+++++.....|+|.++..+. .. + ..++..+|+++. . ..++..+......+..+... .. .
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~-----~----~~~~~~~~~~~~---g---~~~~~~i~~~t~~e~~~~~~-~~----~ 156 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PV-----F----HAKEFTEIAREE---G---IKTVFLAAPNTPDERLKVID-DM----T 156 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CG-----G----GHHHHHHHHHHH---T---CEEEEEECTTCCHHHHHHHH-HH----C
T ss_pred HHHHHHHHHCCCCEEEECCC-Ch-----h----hHHHHHHHHHHh---C---CCeEEEECCCCHHHHHHHHH-hc----C
Confidence 88999999999999988632 11 1 123344444432 1 11222333333333332222 11 3
Q ss_pred ceEE--E--cCccCCC--chhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 209 SGYW--I--GGFGLGE--SMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 209 ~G~~--I--gGl~~ge--~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+||. + .|...+. ......+.++.+.+.+ +.|... -|+.++.++..+...|+|.+-..
T Consensus 157 d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 157 TGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp SSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEc
Confidence 3332 1 1211110 1122345566665554 466554 58889999999999999987655
No 130
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=40.85 E-value=87 Score=26.22 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=42.0
Q ss_pred HHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcE-Ee
Q 015981 201 QEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDL-FD 265 (397)
Q Consensus 201 ~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~-FD 265 (397)
+.+.+.+++-+++..+. +...+.+.++++.+.+.-+.+.+.++=|...+.+...+-+.|+|- |.
T Consensus 63 ~aa~~~~~diV~lS~~~-~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 63 MAAVQEDVDVIGVSILN-GAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIFL 127 (161)
T ss_dssp HHHHHTTCSEEEEEESS-SCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHhcCCCEEEEEeec-hhhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEEC
Confidence 34445677878777654 344566677777776654445555565766677776777899994 63
No 131
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=40.52 E-value=46 Score=29.60 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=52.4
Q ss_pred CeEEeecCCCCH-HHHHHHHHHHHhcCCceEEEc------Ccc-------------CCCchhhHHHHHHHHHcCCCCCCc
Q 015981 182 AVFGSIVGGSNI-EERKRCAQEVAVRNVSGYWIG------GFG-------------LGESMEERPSLLNAVTDNLPKDWP 241 (397)
Q Consensus 182 ~lf~~iqGg~~~-~lR~~sa~~l~~~~~~G~~Ig------Gl~-------------~ge~~~~~~~~v~~~~~~Lp~~kp 241 (397)
.+.+.+..|... +.-.+.++.+.+. ++.+-++ -+. .|.+.....++++.+.+.. +.|
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~--~~p 82 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS--STP 82 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC--CCC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC--CCC
Confidence 366777666552 4444556677666 7777666 211 1113334467787777764 578
Q ss_pred ccccCCCCh-------HHHHHHHHcCCcEEecc
Q 015981 242 RMICGLGLP-------EEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 242 r~l~G~g~P-------~~il~~v~~GvD~FD~~ 267 (397)
.++++..+| ..+-.+.+.|+|.+-..
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 83 IVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV 115 (248)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET
T ss_pred EEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC
Confidence 888765576 56677789999977654
No 132
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=40.23 E-value=50 Score=31.94 Aligned_cols=66 Identities=8% Similarity=0.018 Sum_probs=47.2
Q ss_pred HHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 198 RCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 198 ~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+.++.+.+.+++.+.|..- .|.+ +...+.|+++.+..| +.|. +. ++.+|.+...+++.|+|.++..
T Consensus 103 e~~~~a~~aGvdvI~id~a-~G~~-~~~~e~I~~ir~~~~-~~~V-i~G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 103 QRAEALRDAGADFFCVDVA-HAHA-KYVGKTLKSLRQLLG-SRCI-MAGNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHTTCCEEEEECS-CCSS-HHHHHHHHHHHHHHT-TCEE-EEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEeCC-CCCc-HhHHHHHHHHHHhcC-CCeE-EEcCcCCHHHHHHHHHcCCCEEEEc
Confidence 4467777789998888532 2332 344677888777665 3454 44 4899999999999999999853
No 133
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=39.63 E-value=1.6e+02 Score=27.62 Aligned_cols=121 Identities=7% Similarity=-0.030 Sum_probs=62.8
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEee-cCCCC-HHHH--------
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSI-VGGSN-IEER-------- 196 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~i-qGg~~-~~lR-------- 196 (397)
|++.+++....+|+|++..-. ..+.+-++.+++ ..+...+...++|+. .-+.+ .+++
T Consensus 91 Tv~~av~~~a~lGaD~vTVHa-----~~G~~~m~aa~e--------~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~ 157 (303)
T 3ru6_A 91 TMADACEEVSKLGVDMINIHA-----SAGKIAIQEVMT--------RLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIE 157 (303)
T ss_dssp HHHHHHHHHHTTTCSEEEEEG-----GGCHHHHHHHHH--------HHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHH
T ss_pred hHHHHHHHHHhcCCCEEEEec-----cCCHHHHHHHHH--------HHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHH
Confidence 567788878889999987752 223332322222 222111112266652 22222 2322
Q ss_pred ---HHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCCh----------HHHHHHHHcCCcE
Q 015981 197 ---KRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLP----------EEVLQGVAAGVDL 263 (397)
Q Consensus 197 ---~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P----------~~il~~v~~GvD~ 263 (397)
.+-++...+.|++|++-+. .+ +..+....|.+-....+|++-- ..+-.++..|+|+
T Consensus 158 e~V~~lA~~a~~~G~dGvV~s~-------~E----~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~ 226 (303)
T 3ru6_A 158 EAVINFSKISYENGLDGMVCSV-------FE----SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDY 226 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEECCT-------TT----HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHcCCCEEEECH-------HH----HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCE
Confidence 1223333456787864421 12 2233445565544456788732 1456778999999
Q ss_pred EecchhHH
Q 015981 264 FDSAYIYH 271 (397)
Q Consensus 264 FD~~~p~~ 271 (397)
|-.-.|..
T Consensus 227 iVvGr~I~ 234 (303)
T 3ru6_A 227 IVVGRPIY 234 (303)
T ss_dssp EEECHHHH
T ss_pred EEEChHHh
Confidence 88776643
No 134
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=39.46 E-value=46 Score=33.48 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=48.9
Q ss_pred HHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecc
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
-++.+.+.+++++.|..- .|.. ....++++++.+.+| +.|...-++.++.+...+++.|+|.++..
T Consensus 259 ~a~~~~~aG~d~v~i~~~-~G~~-~~~~~~i~~i~~~~~-~~pvi~~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 259 RLDLLTQAGVDVIVLDSS-QGNS-VYQIAMVHYIKQKYP-HLQVIGGNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHTTCSEEEECCS-CCCS-HHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEeecc-CCcc-hhHHHHHHHHHHhCC-CCceEecccchHHHHHHHHHcCCCEEEEC
Confidence 345566789999988542 2433 334678888888885 67765546899999999999999999874
No 135
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=39.40 E-value=40 Score=30.61 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=41.9
Q ss_pred HHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCC-ChHHHHHHHHcCCcEEe
Q 015981 197 KRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLG-LPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g-~P~~il~~v~~GvD~FD 265 (397)
.+.++.+.+.|.+.+-+|| +.|.+.+...++++.+.+ .+.|..+|+-. +|. ..|+|-+=
T Consensus 23 ~~~~~~l~~~GaD~ielG~-S~Gvt~~~~~~~v~~ir~---~~~Pivlm~y~~n~i------~~G~dg~i 82 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGG-SDGVTEDNVLRMMSKVRR---FLVPCVLEVSAIEAI------VPGFDLYF 82 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC-----CHHHHHHHHHHHTT---SSSCEEEECSCGGGC------CSCCSEEE
T ss_pred HHHHHHHHHcCCCEEEECC-CCCCCHHHHHHHHHHhhC---cCCCEEEecCccccc------cCCCCEEE
Confidence 3456778888999999988 677777777888888876 37899888666 544 67888553
No 136
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=39.10 E-value=50 Score=29.90 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=40.9
Q ss_pred HhcCCceEEEcCccCCCchhh----HHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 204 AVRNVSGYWIGGFGLGESMEE----RPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 204 ~~~~~~G~~IgGl~~ge~~~~----~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.+.+++.+.+|.+-...++.. -.+.++++...++.+.|.+.. |+ +|.++..+.+.|+|.+=..
T Consensus 152 ~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 152 AAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp HHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEES
T ss_pred hhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEe
Confidence 346888888886432222211 145566666665667888866 55 9999999999999987654
No 137
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=38.34 E-value=58 Score=30.03 Aligned_cols=122 Identities=11% Similarity=0.089 Sum_probs=66.9
Q ss_pred CC--ceecChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecC-CCCHHHHH
Q 015981 121 CG--RRLIKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVG-GSNIEERK 197 (397)
Q Consensus 121 ~G--~~~ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqG-g~~~~lR~ 197 (397)
.| +..++|.++.+..+.-|++.+-.++|..-.. +. ...+++.-+.. +-+++ ..+ ..++. .
T Consensus 65 ~g~i~~~~~p~~~A~~y~~~GA~~isvltd~~~f~-Gs----------~~~l~~ir~~v--~lPvl--~kdfiid~~-q- 127 (272)
T 3qja_A 65 AGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQ-GS----------LDDLDAVRASV--SIPVL--RKDFVVQPY-Q- 127 (272)
T ss_dssp --------CHHHHHHHHHHTTCSEEEEECCGGGHH-HH----------HHHHHHHHHHC--SSCEE--EESCCCSHH-H-
T ss_pred CCccCCCCCHHHHHHHHHHcCCCEEEEecChhhcC-CC----------HHHHHHHHHhC--CCCEE--ECccccCHH-H-
Confidence 56 3578999999999999999999886643221 11 11222211111 11222 112 22332 1
Q ss_pred HHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecc
Q 015981 198 RCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 198 ~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+++....|.+|+.++--.+ +.++..++++.+.. + +.. .+..+.++.++..+.++|+|++=..
T Consensus 128 --v~~A~~~GAD~VlLi~a~l--~~~~l~~l~~~a~~-l--Gl~-~lvev~t~ee~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 128 --IHEARAHGADMLLLIVAAL--EQSVLVSMLDRTES-L--GMT-ALVEVHTEQEADRALKAGAKVIGVN 189 (272)
T ss_dssp --HHHHHHTTCSEEEEEGGGS--CHHHHHHHHHHHHH-T--TCE-EEEEESSHHHHHHHHHHTCSEEEEE
T ss_pred --HHHHHHcCCCEEEEecccC--CHHHHHHHHHHHHH-C--CCc-EEEEcCCHHHHHHHHHCCCCEEEEC
Confidence 2344468999998852222 23455666665544 2 111 2456789999999999999987554
No 138
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=38.32 E-value=1.9e+02 Score=24.67 Aligned_cols=116 Identities=9% Similarity=0.042 Sum_probs=62.6
Q ss_pred hhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCCHHHHHHHHHHHHhcC
Q 015981 129 VEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 129 e~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
+.+++.....|+|.++..+.. .. ..+++..+++++. +. +..-+.+-..... -++.+.+.+
T Consensus 67 ~~~~~~~~~~Gad~v~v~~~~-----~~----~~~~~~~~~~~~~-------g~~~~v~~~~~~t~~~---~~~~~~~~g 127 (211)
T 3f4w_A 67 HFESQLLFDAGADYVTVLGVT-----DV----LTIQSCIRAAKEA-------GKQVVVDMICVDDLPA---RVRLLEEAG 127 (211)
T ss_dssp HHHHHHHHHTTCSEEEEETTS-----CH----HHHHHHHHHHHHH-------TCEEEEECTTCSSHHH---HHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEeCCC-----Ch----hHHHHHHHHHHHc-------CCeEEEEecCCCCHHH---HHHHHHHcC
Confidence 344888889999999886331 11 2333444444432 11 2211222233322 234455566
Q ss_pred CceEEEc-Ccc---CCCchhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecch
Q 015981 208 VSGYWIG-GFG---LGESMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 208 ~~G~~Ig-Gl~---~ge~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
++.+.+. |+. .+.+ ..+.++.+.+.+| +.|..+ .|+ +|.++..+++.|+|.+-.-.
T Consensus 128 ~d~i~v~~g~~g~~~~~~---~~~~i~~l~~~~~-~~~i~~~gGI-~~~~~~~~~~~Gad~vvvGs 188 (211)
T 3f4w_A 128 ADMLAVHTGTDQQAAGRK---PIDDLITMLKVRR-KARIAVAGGI-SSQTVKDYALLGPDVVIVGS 188 (211)
T ss_dssp CCEEEEECCHHHHHTTCC---SHHHHHHHHHHCS-SCEEEEESSC-CTTTHHHHHTTCCSEEEECH
T ss_pred CCEEEEcCCCcccccCCC---CHHHHHHHHHHcC-CCcEEEECCC-CHHHHHHHHHcCCCEEEECH
Confidence 6655442 111 1111 1344555555554 456543 577 49999999999999887664
No 139
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=38.26 E-value=1.4e+02 Score=28.61 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=49.8
Q ss_pred CeEEeecCCCCHHHHHHHHHHHH---hcCCceEEEc--------CccCCCchhhHHHHHHHHHcCCCCCCcccc---cCC
Q 015981 182 AVFGSIVGGSNIEERKRCAQEVA---VRNVSGYWIG--------GFGLGESMEERPSLLNAVTDNLPKDWPRMI---CGL 247 (397)
Q Consensus 182 ~lf~~iqGg~~~~lR~~sa~~l~---~~~~~G~~Ig--------Gl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l---~G~ 247 (397)
.+++.|-| .+.+.-.++++.+. +.+++++-|- |-.++.+++...++++++.+.. ++|..+ .+.
T Consensus 128 pvivsI~G-~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~--~~PV~vKi~p~~ 204 (354)
T 4ef8_A 128 PLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY--PHSFGVKMPPYF 204 (354)
T ss_dssp CEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC--CSCEEEEECCCC
T ss_pred cEEEEecc-CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh--CCCeEEEecCCC
Confidence 35555555 56666677887776 3455665542 2223345567788888887765 477653 343
Q ss_pred CChHHHHHHH----HcC-CcEEecc
Q 015981 248 GLPEEVLQGV----AAG-VDLFDSA 267 (397)
Q Consensus 248 g~P~~il~~v----~~G-vD~FD~~ 267 (397)
+..++..++ +.| +|.+-..
T Consensus 205 -d~~~~~~~a~~~~~~Gg~d~I~~~ 228 (354)
T 4ef8_A 205 -DFAHFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp -SHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred -CHHHHHHHHHHHHhCCCccEEEEe
Confidence 566665554 466 8877643
No 140
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=38.15 E-value=50 Score=28.99 Aligned_cols=67 Identities=22% Similarity=0.234 Sum_probs=41.4
Q ss_pred HHHHHhcCCceEEEcCccCCCch-hhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecch
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESM-EERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~-~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
++.+.+.+++.+.+.+...+... ....+.++.+.+.. +.|... -|+.++.++..+.+.|+|.+=...
T Consensus 160 ~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgs 228 (253)
T 1h5y_A 160 AKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAAS 228 (253)
T ss_dssp HHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHH
Confidence 45566678888877554421100 00123444444443 567664 488899999999999999876553
No 141
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=36.79 E-value=86 Score=27.74 Aligned_cols=67 Identities=12% Similarity=0.075 Sum_probs=43.6
Q ss_pred HHHHHHhcCCceEEEcCccC-CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 199 CAQEVAVRNVSGYWIGGFGL-GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~-ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.++.+.+.|++.+.+-.... +.......+.++.+.+.. +.|..+. |+.++.++-.+.+.|+|.+-..
T Consensus 36 ~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg 104 (252)
T 1ka9_F 36 AARAYDEAGADELVFLDISATHEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVN 104 (252)
T ss_dssp HHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 45555666777766643331 222233456677777654 5787765 7778999999999999976544
No 142
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=36.68 E-value=91 Score=29.61 Aligned_cols=80 Identities=19% Similarity=0.126 Sum_probs=50.9
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEc-C-ccCC----CchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIG-G-FGLG----ESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG 260 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~Ig-G-l~~g----e~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G 260 (397)
.||.+.+.-.+.++.+.+.+++.+-+. | .... .......+.+..+.+.+ +.|...- |+.+|++...+++.|
T Consensus 233 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 233 EGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAVGLITTPEQAETLLQAG 310 (349)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCCHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEECCCCCHHHHHHHHHCC
Confidence 467777666677888888999988875 2 2110 01111234445454443 3565554 345899999999999
Q ss_pred -CcEEecchh
Q 015981 261 -VDLFDSAYI 269 (397)
Q Consensus 261 -vD~FD~~~p 269 (397)
+|++=..-+
T Consensus 311 ~aD~V~iGR~ 320 (349)
T 3hgj_A 311 SADLVLLGRV 320 (349)
T ss_dssp SCSEEEESTH
T ss_pred CceEEEecHH
Confidence 998765544
No 143
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=35.99 E-value=92 Score=26.63 Aligned_cols=77 Identities=14% Similarity=0.047 Sum_probs=48.1
Q ss_pred CeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCC
Q 015981 182 AVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGV 261 (397)
Q Consensus 182 ~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~Gv 261 (397)
.+++++-+. +.+.-.+.++.+.+.|++.+.+.- .. ....+.++.+.+.+|.+.+.-+--+-+|.++..+++.|+
T Consensus 11 ~~i~~~~~~-~~~~~~~~~~~~~~~G~~~iev~~---~~--~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Ga 84 (205)
T 1wa3_A 11 KIVAVLRAN-SVEEAKEKALAVFEGGVHLIEITF---TV--PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGA 84 (205)
T ss_dssp CEEEEECCS-SHHHHHHHHHHHHHTTCCEEEEET---TS--TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTC
T ss_pred CEEEEEecC-CHHHHHHHHHHHHHCCCCEEEEeC---CC--hhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCC
Confidence 378888764 444445556777777888876632 11 122345666666555443321112358999999999999
Q ss_pred cEE
Q 015981 262 DLF 264 (397)
Q Consensus 262 D~F 264 (397)
|.+
T Consensus 85 d~i 87 (205)
T 1wa3_A 85 EFI 87 (205)
T ss_dssp SEE
T ss_pred CEE
Confidence 988
No 144
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=35.97 E-value=1.7e+02 Score=26.83 Aligned_cols=118 Identities=15% Similarity=0.098 Sum_probs=62.2
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhc
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVR 206 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~ 206 (397)
..+++++.....|.|-++.+ |.++ +....|.+.+-+..- .++-.+..... +.|.+.+.... .
T Consensus 107 g~~~f~~~~~~aG~dGviv~-Dl~~------------ee~~~~~~~~~~~gl---~~i~liap~s~-~eri~~ia~~~-~ 168 (271)
T 1ujp_A 107 GPERFFGLFKQAGATGVILP-DLPP------------DEDPGLVRLAQEIGL---ETVFLLAPTST-DARIATVVRHA-T 168 (271)
T ss_dssp CHHHHHHHHHHHTCCEEECT-TCCG------------GGCHHHHHHHHHHTC---EEECEECTTCC-HHHHHHHHTTC-C
T ss_pred hHHHHHHHHHHcCCCEEEec-CCCH------------HHHHHHHHHHHHcCC---ceEEEeCCCCC-HHHHHHHHHhC-C
Confidence 45888888889999987776 4332 122344444433211 12223333233 33544333332 3
Q ss_pred CCceEEEcCcc-CCCch---hhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 207 NVSGYWIGGFG-LGESM---EERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 207 ~~~G~~IgGl~-~ge~~---~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++. |.+.-.+ .|... ....++|+.+.+.. +.|..+ +|+.+|+++-.+ .|+|.+-.-
T Consensus 169 gfi-y~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 169 GFV-YAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVG 229 (271)
T ss_dssp SCE-EEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEEC
T ss_pred CCE-EEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEEC
Confidence 443 4443211 12221 12245666666654 578765 788899999996 999976544
No 145
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=35.76 E-value=34 Score=32.32 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHHHhcCCceEEEcCccC--C--------CchhhHHHHHHHHHcCCCCCCcccccCC---CChHHHHHH
Q 015981 190 GSNIEERKRCAQEVAVRNVSGYWIGGFGL--G--------ESMEERPSLLNAVTDNLPKDWPRMICGL---GLPEEVLQG 256 (397)
Q Consensus 190 g~~~~lR~~sa~~l~~~~~~G~~IgGl~~--g--------e~~~~~~~~v~~~~~~Lp~~kpr~l~G~---g~P~~il~~ 256 (397)
|...+-+.+.++.+.+++++.+.+.-+.. | .+.++..+++..+.-.||.- ++..- ..+.....+
T Consensus 213 get~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~---~I~a~~~~~g~~~~~~~ 289 (350)
T 3t7v_A 213 GNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKR---LIPASLDLEGIDGMVLR 289 (350)
T ss_dssp SCCHHHHHHHHHHHHHTCCSEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTS---BCEEEHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCc---CccccccccChhHHHHH
Confidence 46677788888899888887665554432 1 23356677777777777752 22211 123445677
Q ss_pred HHcCCcEEecchhH
Q 015981 257 VAAGVDLFDSAYIY 270 (397)
Q Consensus 257 v~~GvD~FD~~~p~ 270 (397)
...|+|.|++..+-
T Consensus 290 l~~Gan~~~~~~~~ 303 (350)
T 3t7v_A 290 LNAGANIVTSILPP 303 (350)
T ss_dssp HHTTCCEEEEECCS
T ss_pred HhcCCceecCCCCC
Confidence 89999999988653
No 146
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=35.63 E-value=64 Score=31.17 Aligned_cols=64 Identities=16% Similarity=0.115 Sum_probs=45.9
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
++.+.+.+++.+.|... .|.+ +...+.|+++.+..| +.|...-.+.++.+...+++.|+|.+..
T Consensus 113 ~~~lieaGvd~I~idta-~G~~-~~~~~~I~~ik~~~p-~v~Vi~G~v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 113 VKALVEAGVDVLLIDSS-HGHS-EGVLQRIRETRAAYP-HLEIIGGNVATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHTTCSEEEEECS-CTTS-HHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhCCCCEEEEeCC-CCCC-HHHHHHHHHHHHhcC-CCceEeeeeCCHHHHHHHHHcCCCEEEE
Confidence 55667788998888532 1332 455677888887776 4554332488999999999999999987
No 147
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=35.45 E-value=1.2e+02 Score=27.03 Aligned_cols=121 Identities=17% Similarity=0.179 Sum_probs=64.1
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEe-ecCCCCHHHHHHHHHHHH
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGS-IVGGSNIEERKRCAQEVA 204 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~-iqGg~~~~lR~~sa~~l~ 204 (397)
-+|+.|++.....|+|++..-.+.+.. +.|+++.+++. +...|+ +-.+...+.. +++.
T Consensus 74 ~~p~~~i~~~~~aGad~itvH~Ea~~~----------~~~~i~~i~~~-------G~k~gval~p~t~~e~l----~~~l 132 (228)
T 3ovp_A 74 SKPEQWVKPMAVAGANQYTFHLEATEN----------PGALIKDIREN-------GMKVGLAIKPGTSVEYL----APWA 132 (228)
T ss_dssp SCGGGGHHHHHHHTCSEEEEEGGGCSC----------HHHHHHHHHHT-------TCEEEEEECTTSCGGGT----GGGG
T ss_pred CCHHHHHHHHHHcCCCEEEEccCCchh----------HHHHHHHHHHc-------CCCEEEEEcCCCCHHHH----HHHh
Confidence 467889998899999999776443321 34445444331 222222 3344443322 2333
Q ss_pred hcCCceEEEcCccC---CCch-hhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 205 VRNVSGYWIGGFGL---GESM-EERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 205 ~~~~~G~~IgGl~~---ge~~-~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
+ .++.+.+-.... |... ++..+-++.+.+..+ +.|.-+-|==+|..+..+++.|+|+|-.-.+
T Consensus 133 ~-~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~-~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsa 199 (228)
T 3ovp_A 133 N-QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFP-SLDIEVDGGVGPDTVHKCAEAGANMIVSGSA 199 (228)
T ss_dssp G-GCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCT-TCEEEEESSCSTTTHHHHHHHTCCEEEESHH
T ss_pred c-cCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcC-CCCEEEeCCcCHHHHHHHHHcCCCEEEEeHH
Confidence 2 244443322211 1111 112233444444443 3444443333799999999999999987744
No 148
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=34.88 E-value=94 Score=29.32 Aligned_cols=72 Identities=22% Similarity=0.259 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHhcC--CceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccC-CCChHHHHHHHHcCCcEEecc
Q 015981 191 SNIEERKRCAQEVAVRN--VSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICG-LGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~--~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G-~g~P~~il~~v~~GvD~FD~~ 267 (397)
...+..+ .++.+.+.+ ++.+.|.. ..| ......+.|+++.+..| .|..+-| +.++++...+++.|+|.++.+
T Consensus 103 ~~~~~~~-~a~~~~~~g~~~~~i~i~~-~~G-~~~~~~~~i~~lr~~~~--~~~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 103 VKEDEYE-FVQQLAAEHLTPEYITIDI-AHG-HSNAVINMIQHIKKHLP--ESFVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp CSHHHHH-HHHHHHHTTCCCSEEEEEC-SSC-CSHHHHHHHHHHHHHCT--TSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred CCHHHHH-HHHHHHhcCCCCCEEEEEC-CCC-CcHHHHHHHHHHHHhCC--CCEEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 3444333 255666666 77766642 223 33455778888888775 2444567 889999999999999999883
No 149
>2p06_A Hypothetical protein AF_0060; MCSG, PSI2, MAD, structural genomics, singleton, predicted C region AF_0060; 2.10A {Archaeoglobus fulgidus dsm 4304} SCOP: a.204.1.3
Probab=34.43 E-value=57 Score=24.55 Aligned_cols=28 Identities=14% Similarity=0.382 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 015981 357 HHYLGFFRSIREAIKEGCFEQFQKKFVQ 384 (397)
Q Consensus 357 ~~~~~~~~~iR~aI~~g~l~~~~~~f~~ 384 (397)
.-+...|.++|+|++...++++.++.+.
T Consensus 63 srlfeemdelreavekedwenlrdelld 90 (114)
T 2p06_A 63 SRLFEEMDELREAVEKEDWENLRDELLD 90 (114)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999887763
No 150
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=34.27 E-value=1.4e+02 Score=28.04 Aligned_cols=82 Identities=11% Similarity=0.143 Sum_probs=51.9
Q ss_pred CCeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccC-------CCc-hhhHHHHHHHHHcCCCCCCcccccCC---CC
Q 015981 181 GAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGL-------GES-MEERPSLLNAVTDNLPKDWPRMICGL---GL 249 (397)
Q Consensus 181 ~~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~-------ge~-~~~~~~~v~~~~~~Lp~~kpr~l~G~---g~ 249 (397)
.++++.+-.|.+.+...+.++ ..+++++.|-.-.. ++. .....+.|+++.+.. +.|..+-++ .+
T Consensus 117 ~pv~~~i~~~~~~~~~~~~~~---~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~ 191 (349)
T 1p0k_A 117 GLIFANLGSEATAAQAKEAVE---MIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMS 191 (349)
T ss_dssp SCEEEEEETTCCHHHHHHHHH---HTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCC
T ss_pred ceeEEeecCCCCHHHHHHHHH---hcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCC
Confidence 457888865666665444433 34677765532110 111 112567787777765 578776543 57
Q ss_pred hHHHHHHHHcCCcEEecc
Q 015981 250 PEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 250 P~~il~~v~~GvD~FD~~ 267 (397)
+.++..+.+.|+|.++.+
T Consensus 192 ~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 999999999999999986
No 151
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=34.23 E-value=2.6e+02 Score=25.14 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=63.6
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhc
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVR 206 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~ 206 (397)
..+.+++.....|.|.++.. |.++ +....|.+.+-+ +. -.++..+...... .|.+.+.... .
T Consensus 110 g~~~f~~~~~~aG~dgvii~-dl~~------------ee~~~~~~~~~~-~g--l~~i~l~~p~t~~-~rl~~ia~~a-~ 171 (262)
T 2ekc_A 110 GLEKFCRLSREKGIDGFIVP-DLPP------------EEAEELKAVMKK-YV--LSFVPLGAPTSTR-KRIKLICEAA-D 171 (262)
T ss_dssp CHHHHHHHHHHTTCCEEECT-TCCH------------HHHHHHHHHHHH-TT--CEECCEECTTCCH-HHHHHHHHHC-S
T ss_pred hHHHHHHHHHHcCCCEEEEC-CCCH------------HHHHHHHHHHHH-cC--CcEEEEeCCCCCH-HHHHHHHHhC-C
Confidence 44888899999999987776 3221 333445544433 21 0122222232333 3443333333 2
Q ss_pred CCceEEEcCcc-CCCch----hhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 207 NVSGYWIGGFG-LGESM----EERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 207 ~~~G~~IgGl~-~ge~~----~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++ .|.++-.+ .|... ....+.++.+.+.. +.|..+ +|+.+|.++.. +..|+|.+-.-
T Consensus 172 gf-iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 172 EM-TYFVSVTGTTGAREKLPYERIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVG 234 (262)
T ss_dssp SC-EEEESSCC---------CHHHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEEC
T ss_pred CC-EEEEecCCccCCCCCcCcccHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEEC
Confidence 44 35553221 12111 23456676666654 466554 68889999999 89999976544
No 152
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=34.19 E-value=63 Score=28.68 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=41.0
Q ss_pred HHHHHhcCCceEEEcCccC-CCchhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 200 AQEVAVRNVSGYWIGGFGL-GESMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~-ge~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++.+.+.+++++.+-+... |.....-.+.++.+.+.+ +.|.+. -|+++|.++..+.+.|+|-+=..
T Consensus 158 ~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 158 AVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAA 225 (252)
T ss_dssp HHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHH
Confidence 3445556888887754331 111000134555555544 467664 58999999999999999976554
No 153
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=34.15 E-value=78 Score=31.72 Aligned_cols=67 Identities=18% Similarity=0.236 Sum_probs=42.3
Q ss_pred HHHHHHhcCCceEEEcCccCCCc----------hhhHHHHHHHHHcCCC-CCCccccc-CCCChHHHHHHHHcCCcEEec
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGES----------MEERPSLLNAVTDNLP-KDWPRMIC-GLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~----------~~~~~~~v~~~~~~Lp-~~kpr~l~-G~g~P~~il~~v~~GvD~FD~ 266 (397)
.++.+.+.|++++.+|+ +.|.. .. ....+..+.+.+. .+.|...- |+.+|.+|..++++|+|..=.
T Consensus 283 ~a~~l~~aGaD~I~vg~-g~Gs~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 283 AAKALAEAGADAVKVGI-GPGSICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp HHHHHHHTTCSEEEECS-SCSTTCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCEEEECC-CCCcCCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeee
Confidence 46677788999999853 21110 11 1234444444332 25676543 899999999999999986544
Q ss_pred c
Q 015981 267 A 267 (397)
Q Consensus 267 ~ 267 (397)
-
T Consensus 361 G 361 (490)
T 4avf_A 361 G 361 (490)
T ss_dssp C
T ss_pred c
Confidence 3
No 154
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=33.69 E-value=94 Score=27.00 Aligned_cols=66 Identities=15% Similarity=0.156 Sum_probs=42.2
Q ss_pred HHHHhcCCceEEEcCccCCCch----hhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchh
Q 015981 201 QEVAVRNVSGYWIGGFGLGESM----EERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 201 ~~l~~~~~~G~~IgGl~~ge~~----~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
+...+.+++.+.++..-.+.+. ..-.+.++.+.+.+ +.|.+.. |+ +|.++..+++.|+|.++....
T Consensus 124 ~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 124 VQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TPDRLRDVKQAGADGIAVMSG 194 (221)
T ss_dssp HHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CGGGHHHHHHTTCSEEEESHH
T ss_pred HHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CHHHHHHHHHcCCCEEEEhHH
Confidence 3444567888888764211111 11245566555544 5777766 56 999999999999999998754
No 155
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=33.66 E-value=1.1e+02 Score=30.82 Aligned_cols=67 Identities=13% Similarity=0.228 Sum_probs=40.5
Q ss_pred HHHHHHhcCCceEEEcCccCCC----------chhhHHHHHHHHHcCCCC-CCcccc-cCCCChHHHHHHHHcCCcEEec
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGE----------SMEERPSLLNAVTDNLPK-DWPRMI-CGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge----------~~~~~~~~v~~~~~~Lp~-~kpr~l-~G~g~P~~il~~v~~GvD~FD~ 266 (397)
.++.+.+.|++++.+|. +.|. .... ...+..+.+..+. +.|.+. -|+.+|.+|..++++|+|..=.
T Consensus 310 ~a~~~~~aGad~i~vg~-g~gsi~~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~v 387 (511)
T 3usb_A 310 ATKALIEAGANVVKVGI-GPGSICTTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVML 387 (511)
T ss_dssp HHHHHHHHTCSEEEECS-SCSTTCCHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCEEEECC-CCccccccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhhee
Confidence 46667778999998842 2221 0111 1223222222211 466654 3999999999999999997654
Q ss_pred c
Q 015981 267 A 267 (397)
Q Consensus 267 ~ 267 (397)
-
T Consensus 388 G 388 (511)
T 3usb_A 388 G 388 (511)
T ss_dssp S
T ss_pred c
Confidence 4
No 156
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=33.59 E-value=68 Score=32.24 Aligned_cols=64 Identities=16% Similarity=0.118 Sum_probs=48.7
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
++.+.+.+++.+.|+.-. +.+ +...+.|+++.+..| +.|..+-++.++.+...+++.|+|.+..
T Consensus 236 a~~l~~aG~d~I~id~a~-g~~-~~~~~~i~~ir~~~p-~~~Vi~g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 236 VKALVEAGVDVLLIDSSH-GHS-EGVLQRIRETRAAYP-HLEIIGGNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp HHHHHHTTCSEEEEECSC-TTS-HHHHHHHHHHHHHCT-TCCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhccCceEEecccc-ccc-hHHHHHHHHHHHHCC-CceEEEcccCcHHHHHHHHHhCCCEEEE
Confidence 456667789999887543 433 445678888888886 5776565688999999999999999974
No 157
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=33.53 E-value=88 Score=27.76 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=44.6
Q ss_pred HHHHHHHhcCCceEEEcCccC-CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 198 RCAQEVAVRNVSGYWIGGFGL-GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 198 ~sa~~l~~~~~~G~~IgGl~~-ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+.++.+.+.+++.+.+-.+.. +.......++++.+.+.. +.|..+- |+.+|.++..+.+.|+|.+-..
T Consensus 39 ~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 39 DWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred HHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 456666777888776654431 111111246677777665 4677665 8889999999999999976533
No 158
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=33.38 E-value=47 Score=30.00 Aligned_cols=126 Identities=14% Similarity=0.055 Sum_probs=65.6
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-h-CCCCCCeEEeec-CCCCHHHHHHHHHHH
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIA-R-SPAGGAVFGSIV-GGSNIEERKRCAQEV 203 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~-~-~~~~~~lf~~iq-Gg~~~~lR~~sa~~l 203 (397)
.|+.|++.....|+|++....+.+. ...++.+|+++.-. . ....+...|+.. .+...+. ++.+
T Consensus 80 ~p~~~i~~~~~aGAd~itvH~ea~~----------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~----l~~~ 145 (237)
T 3cu2_A 80 NQLEVAKAVVANGANLVTLQLEQYH----------DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISE----LEPY 145 (237)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTCTT----------SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGG----GTTT
T ss_pred CHHHHHHHHHHcCCCEEEEecCCcc----------cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHH----HHHH
Confidence 6799999999999999877644331 13456666642100 0 000022344443 2333221 1222
Q ss_pred HhcCCceEEE----cCccCCCc-hhhHHHHHHHHHcCCCC---CCcccccCCCChHHHHHHHH--cCCcEEecch
Q 015981 204 AVRNVSGYWI----GGFGLGES-MEERPSLLNAVTDNLPK---DWPRMICGLGLPEEVLQGVA--AGVDLFDSAY 268 (397)
Q Consensus 204 ~~~~~~G~~I----gGl~~ge~-~~~~~~~v~~~~~~Lp~---~kpr~l~G~g~P~~il~~v~--~GvD~FD~~~ 268 (397)
.+ +++.+.+ .|++ |.+ .+...+-|+.+.+.+++ +.|..+-|==++..+..+++ .|+|.|-.-.
T Consensus 146 l~-~~D~vlvMsv~pgfg-gq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGS 218 (237)
T 3cu2_A 146 LD-QIDVIQLLTLDPRNG-TKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGS 218 (237)
T ss_dssp TT-TCSEEEEESEETTTT-EECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECG
T ss_pred hh-cCceeeeeeeccCcC-CeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCCCcEEEEee
Confidence 22 4554433 2222 111 12233444444444432 34544555557999999999 9999988763
No 159
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=32.89 E-value=79 Score=28.21 Aligned_cols=61 Identities=10% Similarity=0.015 Sum_probs=43.4
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEe
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD 265 (397)
++++.+.|++.+.++.-. ..++++..++++.+.+. + ...+..+.++.+...+.+.|+|.+=
T Consensus 94 i~~~~~aGad~I~l~~~~-~~~p~~l~~~i~~~~~~---g-~~v~~~v~t~eea~~a~~~Gad~Ig 154 (229)
T 3q58_A 94 VDALAQAGADIIAFDASF-RSRPVDIDSLLTRIRLH---G-LLAMADCSTVNEGISCHQKGIEFIG 154 (229)
T ss_dssp HHHHHHHTCSEEEEECCS-SCCSSCHHHHHHHHHHT---T-CEEEEECSSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEECccc-cCChHHHHHHHHHHHHC---C-CEEEEecCCHHHHHHHHhCCCCEEE
Confidence 455667899988887643 22335566777766653 2 3345688999999999999999994
No 160
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=32.78 E-value=1.3e+02 Score=29.84 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=42.5
Q ss_pred HHHHHhcCCceEEEcCccCC-C--------chhhHHHHHHHHHcCCCC-CCccccc-CCCChHHHHHHHHcCCcEEecch
Q 015981 200 AQEVAVRNVSGYWIGGFGLG-E--------SMEERPSLLNAVTDNLPK-DWPRMIC-GLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~g-e--------~~~~~~~~v~~~~~~Lp~-~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
++.+.+.|++++.+++-+.+ . .... ...+..+.+.++. +.|.+.- |+.+|.++..++++|+|.+=..-
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr 370 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGS 370 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHcCCCEEEEcCCCCccccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 35666789999998542210 0 0011 2223333332222 4565543 88999999999999999887765
Q ss_pred hH
Q 015981 269 IY 270 (397)
Q Consensus 269 p~ 270 (397)
|.
T Consensus 371 ~~ 372 (494)
T 1vrd_A 371 IF 372 (494)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 161
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=32.41 E-value=41 Score=30.03 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=62.5
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeec-CCCCHHHHHHHHHHHHh
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIV-GGSNIEERKRCAQEVAV 205 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iq-Gg~~~~lR~~sa~~l~~ 205 (397)
+|++|++.....|+|.+....+..+.. .. .++.+.++ + .+...|+.. .+...+ |. +.+.+
T Consensus 73 dp~~~i~~~~~aGadgv~vh~e~~~~~-~~-------~~~~~~i~---~----~g~~~gv~~~p~t~~e-~~---~~~~~ 133 (230)
T 1tqj_A 73 EPEKYVEDFAKAGADIISVHVEHNASP-HL-------HRTLCQIR---E----LGKKAGAVLNPSTPLD-FL---EYVLP 133 (230)
T ss_dssp SGGGTHHHHHHHTCSEEEEECSTTTCT-TH-------HHHHHHHH---H----TTCEEEEEECTTCCGG-GG---TTTGG
T ss_pred CHHHHHHHHHHcCCCEEEECcccccch-hH-------HHHHHHHH---H----cCCcEEEEEeCCCcHH-HH---HHHHh
Confidence 468899999999999997764411111 11 12232222 2 133444443 233322 21 22222
Q ss_pred cCCceEEEcCccCC---Cc-hhhHHHHHHHHHcCCC---CCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 206 RNVSGYWIGGFGLG---ES-MEERPSLLNAVTDNLP---KDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 206 ~~~~G~~IgGl~~g---e~-~~~~~~~v~~~~~~Lp---~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
+++.+.++....| .. .....+.++.+.+.++ .+.|..+-|=-++.++..+++.|+|.|-....
T Consensus 134 -~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGSa 203 (230)
T 1tqj_A 134 -VCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSA 203 (230)
T ss_dssp -GCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHH
T ss_pred -cCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECHH
Confidence 4554444444322 11 1122333333333332 24565554433569999999999999987643
No 162
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=31.90 E-value=1e+02 Score=29.22 Aligned_cols=80 Identities=11% Similarity=-0.012 Sum_probs=52.1
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEEc-CccCCC----chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC-
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWIG-GFGLGE----SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG- 260 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~Ig-Gl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G- 260 (397)
.||.+.+.-.+.++.+.+.|++.+-+. |..... ......+.+..+.+.+ +.|.... |+.+|++...+++.|
T Consensus 223 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp TTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHCCC
Confidence 356666666677888889999988874 321110 1111245555555555 4676655 556899999999999
Q ss_pred CcEEecchh
Q 015981 261 VDLFDSAYI 269 (397)
Q Consensus 261 vD~FD~~~p 269 (397)
+|++=..-+
T Consensus 301 aD~V~iGR~ 309 (340)
T 3gr7_A 301 ADLVFLGRE 309 (340)
T ss_dssp CSEEEECHH
T ss_pred eeEEEecHH
Confidence 998765543
No 163
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=31.52 E-value=72 Score=29.43 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=40.3
Q ss_pred HHHHHHhcCCceEEEcCcc--CCCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 199 CAQEVAVRNVSGYWIGGFG--LGESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~--~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.++.+.+.+.+...--|-. .|..... .++|+.+.+.. +-|.+.= |+++|.++..+.++|+|-+-..
T Consensus 148 ~akrl~~~G~~aVmPlg~pIGsG~Gi~~-~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 148 IARQLAEIGCIAVMPLAGLIGSGLGICN-PYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp HHHHHHHSCCSEEEECSSSTTCCCCCSC-HHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHhCCCEEEeCCccCCCCCCcCC-HHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 3456667777766542322 2211111 34555555532 4565554 9999999999999999965443
No 164
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=31.43 E-value=65 Score=30.75 Aligned_cols=79 Identities=13% Similarity=-0.001 Sum_probs=49.7
Q ss_pred cCCCCHHHHHHHHHHHHhcCCceEEE-cCccCCC----chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC-
Q 015981 188 VGGSNIEERKRCAQEVAVRNVSGYWI-GGFGLGE----SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG- 260 (397)
Q Consensus 188 qGg~~~~lR~~sa~~l~~~~~~G~~I-gGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G- 260 (397)
.||...+.-.+.++.+.+. ++.+-+ .|-.... ......+.+..+.+.+ +.|.... |+.+|.+...+++.|
T Consensus 224 ~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~Ae~~l~~G~ 300 (343)
T 3kru_A 224 EGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC--NIKTSAVGLITTQELAEEILSNER 300 (343)
T ss_dssp TTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCEEEEESSCCCHHHHHHHHHTTS
T ss_pred ccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc--CcccceeeeeeHHHHHHHHHhchh
Confidence 3567777667778888888 998887 3322110 1111234444444444 3676555 456899999999998
Q ss_pred CcEEecchh
Q 015981 261 VDLFDSAYI 269 (397)
Q Consensus 261 vD~FD~~~p 269 (397)
+|++=..-+
T Consensus 301 aD~V~iGR~ 309 (343)
T 3kru_A 301 ADLVALGRE 309 (343)
T ss_dssp CSEEEESHH
T ss_pred hHHHHHHHH
Confidence 998766544
No 165
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=31.21 E-value=89 Score=27.90 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=43.3
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEe
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD 265 (397)
++++.+.|++.+.++.-. ..++++..++++.+.+. ....+..+.++.+...+.+.|+|.+=
T Consensus 94 i~~~~~~Gad~V~l~~~~-~~~p~~l~~~i~~~~~~----g~~v~~~v~t~eea~~a~~~Gad~Ig 154 (232)
T 3igs_A 94 VDALAQAGAAIIAVDGTA-RQRPVAVEALLARIHHH----HLLTMADCSSVDDGLACQRLGADIIG 154 (232)
T ss_dssp HHHHHHHTCSEEEEECCS-SCCSSCHHHHHHHHHHT----TCEEEEECCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEECccc-cCCHHHHHHHHHHHHHC----CCEEEEeCCCHHHHHHHHhCCCCEEE
Confidence 445667899988887643 22335566777766553 23345688999999999999999984
No 166
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=31.08 E-value=1e+02 Score=26.61 Aligned_cols=120 Identities=14% Similarity=0.073 Sum_probs=64.4
Q ss_pred hhhHHHHHHhcCCcEEEEcCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHhc
Q 015981 128 PVEYMEMITSMKPNLWATLADEVPAW-ANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVR 206 (397)
Q Consensus 128 pe~~~~~q~~i~pDi~~~L~d~~~~~-~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~~ 206 (397)
+.+.++.....|+|.+..-......+ ... ...++++++. .+ +..+++ +....+. +..+.+.
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~-------~~~i~~~~~~---~~--~~~v~~--~~~t~~e----~~~~~~~ 138 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETL-------DELVSYIRTH---AP--NVEIMA--DIATVEE----AKNAARL 138 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCH-------HHHHHHHHHH---CT--TSEEEE--ECSSHHH----HHHHHHT
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCH-------HHHHHHHHHh---CC--CceEEe--cCCCHHH----HHHHHHc
Confidence 35667777889999886543332211 121 2233333332 11 222221 2233322 2335567
Q ss_pred CCceEEEcCccC-----CCc-hhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 207 NVSGYWIGGFGL-----GES-MEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 207 ~~~G~~IgGl~~-----ge~-~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+++.+.++..+. +.. .....+.++.+.+.+ +.|...- |+.+|.++..+.+.|+|.+-..
T Consensus 139 G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 139 GFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp TCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 777765532211 110 122345666666655 4677655 7889999999999999988765
No 167
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=30.54 E-value=3.4e+02 Score=28.26 Aligned_cols=122 Identities=16% Similarity=0.091 Sum_probs=73.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecC-----CCCHHHHHHHHHHHHhc---CCc---eEEEcCccCCCch
Q 015981 154 ANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVG-----GSNIEERKRCAQEVAVR---NVS---GYWIGGFGLGESM 222 (397)
Q Consensus 154 ~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqG-----g~~~~lR~~sa~~l~~~---~~~---G~~IgGl~~ge~~ 222 (397)
.+.+++.+.+..+.+++.+..+... ..-|++--+ ..+.+.-.+.++.+.+. +.+ -+.|.-....-.+
T Consensus 183 ~s~eevle~~~~~v~~a~~~~~~~~--~~~~~v~fs~Edasrtd~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP 260 (644)
T 3hq1_A 183 ANRAEVQAIATDGARKCVEQAAKYP--GTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTP 260 (644)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSC--SSEEEEEEEEETGGGSCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEEcCcccCCCCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCH
Confidence 4566666666666666665543221 123443332 35778777788877764 343 3444433223456
Q ss_pred hhHHHHHHHHHcCCCC--CCcc--ccc-CCC-ChHHHHHHHHcCCcEEecchhHHhh-hccee
Q 015981 223 EERPSLLNAVTDNLPK--DWPR--MIC-GLG-LPEEVLQGVAAGVDLFDSAYIYHLT-IGGFA 278 (397)
Q Consensus 223 ~~~~~~v~~~~~~Lp~--~kpr--~l~-G~g-~P~~il~~v~~GvD~FD~~~p~~~a-~~G~a 278 (397)
.+..++++++.+.+|. +.|. |.+ -.| .....+.|+..|+|.||++. .-.+ |.|.+
T Consensus 261 ~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vdgti-~G~GERaGNa 322 (644)
T 3hq1_A 261 NVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCL-FGNGERTGNV 322 (644)
T ss_dssp HHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBG-GGCSSTTCBC
T ss_pred HHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEEecC-CCCCccccCc
Confidence 7788899999999885 3343 443 233 36788999999999999883 3333 35554
No 168
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=30.52 E-value=1.1e+02 Score=28.23 Aligned_cols=120 Identities=15% Similarity=0.181 Sum_probs=61.5
Q ss_pred ChhhHHHHHH----hcCCcEE--EEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEeecCCCCHHHHHHH
Q 015981 127 KPVEYMEMIT----SMKPNLW--ATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGA-VFGSIVGGSNIEERKRC 199 (397)
Q Consensus 127 tpe~~~~~q~----~i~pDi~--~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~-lf~~iqGg~~~~lR~~s 199 (397)
|.|+.+++.+ .++.+++ -.+.|.....++ ....++++..+.++ +. ++.... .+.. .
T Consensus 75 taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD---~~~tv~aa~~L~k~--------Gf~Vlpy~~--~D~~----~ 137 (268)
T 2htm_A 75 TAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPD---PLETLKAAERLIEE--------DFLVLPYMG--PDLV----L 137 (268)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCC---HHHHHHHHHHHHHT--------TCEECCEEC--SCHH----H
T ss_pred CHHHHHHHHHhhhHhcCcceeeeeeccCccccCcC---HHHHHHHHHHHHHC--------CCEEeeccC--CCHH----H
Confidence 5666666443 6788875 223332111122 33444445544432 32 343332 4443 3
Q ss_pred HHHHHhcCCceEEE-cCc---cCCCchhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEec
Q 015981 200 AQEVAVRNVSGYWI-GGF---GLGESMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 200 a~~l~~~~~~G~~I-gGl---~~ge~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~ 266 (397)
++.+.+.+.+.+.- |.. +.|-.. .+.|+.+.+..+.+-|.+. =|+++|.++..+.++|+|-+-.
T Consensus 138 ak~l~~~G~~aVmPlg~pIGsG~Gi~~---~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 138 AKRLAALGTATVMPLAAPIGSGWGVRT---RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLV 206 (268)
T ss_dssp HHHHHHHTCSCBEEBSSSTTTCCCSTT---HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHhcCCCEEEecCccCcCCcccCC---HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 44555556555432 221 222222 2345555552232256554 3999999999999999996443
No 169
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=30.52 E-value=1.4e+02 Score=28.31 Aligned_cols=44 Identities=27% Similarity=0.380 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCCCCcccc--c------CCCChHHHHH----HHHcCCcEEecch
Q 015981 225 RPSLLNAVTDNLPKDWPRMI--C------GLGLPEEVLQ----GVAAGVDLFDSAY 268 (397)
Q Consensus 225 ~~~~v~~~~~~Lp~~kpr~l--~------G~g~P~~il~----~v~~GvD~FD~~~ 268 (397)
..++|+++.+.++.++|.-+ . |-.++.+.+. +.+.|+|.++.+.
T Consensus 205 ~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 36788888999998988543 1 1124555333 3468999999873
No 170
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=30.45 E-value=1.2e+02 Score=30.50 Aligned_cols=69 Identities=13% Similarity=0.083 Sum_probs=40.9
Q ss_pred HHHHHHhcCCceEEEcCccCCC-ch-------hhHHHHHHHHHcCCC-CCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGE-SM-------EERPSLLNAVTDNLP-KDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge-~~-------~~~~~~v~~~~~~Lp-~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
.++.+.+.|++++.+|+-..+. .. ......+..+.+.+. .+.|...- |+.+|.+|..++++|+|..=.-
T Consensus 285 ~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 285 GARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp HHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEec
Confidence 4567777899999987322111 00 001233333333221 14666543 8999999999999999865433
No 171
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=30.34 E-value=58 Score=29.05 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=36.0
Q ss_pred HHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChH-HHHHHHHcCCcEEecchhHHh
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPE-EVLQGVAAGVDLFDSAYIYHL 272 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~-~il~~v~~GvD~FD~~~p~~~ 272 (397)
.++...+.+.+|++.++. .+++ ++.+.+.+|. .....+|++--. +.-.++..|.|.+-.--|...
T Consensus 127 ~a~~a~~~g~~GvV~sat----~p~e----~~~ir~~~~~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 127 IKNVIREISPKGIVVGGT----KLDH----ITQYRRDFEK-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHCCSEEEECTT----CHHH----HHHHHHHCTT-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHhCCCEEEECCC----CHHH----HHHHHHhCCC-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 344444567888877642 1122 3333445554 444556776211 344667899999876666543
No 172
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=30.24 E-value=93 Score=27.95 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=47.6
Q ss_pred HHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCC-ChHHHHHHH-HcCCcEEecc
Q 015981 197 KRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLG-LPEEVLQGV-AAGVDLFDSA 267 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g-~P~~il~~v-~~GvD~FD~~ 267 (397)
.++.+.+.++|++-+.-.|-..+.+..+-.+.++...+. -.+++..+.|-| ++.++...+ +.|++-|=.+
T Consensus 136 ~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~-a~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 136 KKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEY-ANNRIEIMVGGGVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHH-HTTSSEEEECSSCCTTTHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHh-hCCCeEEEeCCCCCHHHHHHHHHhhCCCEEccc
Confidence 567889999999998777755442233333444433332 234677788888 899999888 6899888754
No 173
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=29.80 E-value=58 Score=31.24 Aligned_cols=43 Identities=28% Similarity=0.373 Sum_probs=28.1
Q ss_pred HHHHHHHHcCCCCCCcccc-cCC------C--ChHH---HHH-HHHcCCcEEecch
Q 015981 226 PSLLNAVTDNLPKDWPRMI-CGL------G--LPEE---VLQ-GVAAGVDLFDSAY 268 (397)
Q Consensus 226 ~~~v~~~~~~Lp~~kpr~l-~G~------g--~P~~---il~-~v~~GvD~FD~~~ 268 (397)
.++|+++.+.++.+.|.-+ +.. | ++.+ ++. +.+.|+|.++.+-
T Consensus 212 ~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 212 LETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp HHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 6788889999998887533 111 1 2333 333 3468999999874
No 174
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=29.67 E-value=1.4e+02 Score=27.41 Aligned_cols=99 Identities=20% Similarity=0.172 Sum_probs=63.0
Q ss_pred CCeEEeecCCC-CHHHHHHHHHHHHhcCCceEEEcCccCC--------------------CchhhHHHHHHHHHcCCCCC
Q 015981 181 GAVFGSIVGGS-NIEERKRCAQEVAVRNVSGYWIGGFGLG--------------------ESMEERPSLLNAVTDNLPKD 239 (397)
Q Consensus 181 ~~lf~~iqGg~-~~~lR~~sa~~l~~~~~~G~~IgGl~~g--------------------e~~~~~~~~v~~~~~~Lp~~ 239 (397)
..+.+-|..|+ +.+-=.+.++.+.+.|++.+-|| +.+. -+.....++|+.+.+..+ +
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElg-iPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~-~ 95 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELG-FPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP-D 95 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE-CCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-T
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC-CCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-C
Confidence 34777776554 45656667888888899988886 3322 222334566666665432 5
Q ss_pred CcccccCCCCh------H-HHHHHHHcCCcEEecc-hhH--------Hhhhcceeecc
Q 015981 240 WPRMICGLGLP------E-EVLQGVAAGVDLFDSA-YIY--------HLTIGGFALTF 281 (397)
Q Consensus 240 kpr~l~G~g~P------~-~il~~v~~GvD~FD~~-~p~--------~~a~~G~al~f 281 (397)
.|.++|+-.+| . -+-.+.+.|+|.+-.+ .|. ...++|..+.|
T Consensus 96 ~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 96 MPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEC
T ss_pred CCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEE
Confidence 78999988777 2 3566678999985433 443 34467776554
No 175
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=29.55 E-value=1.3e+02 Score=28.88 Aligned_cols=82 Identities=11% Similarity=-0.014 Sum_probs=53.1
Q ss_pred CCeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCcc-------CCCc-hhhHHHHHHHHHcCCCCCCcccccCC---CC
Q 015981 181 GAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFG-------LGES-MEERPSLLNAVTDNLPKDWPRMICGL---GL 249 (397)
Q Consensus 181 ~~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~-------~ge~-~~~~~~~v~~~~~~Lp~~kpr~l~G~---g~ 249 (397)
..+++.|-.+...+.-.+.++ ..+.+.+.|.--. .|+. ...+.+.|+++.+.+ ++|..+=++ .+
T Consensus 145 ~~~ianig~~~~~e~~~~~ve---~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~vg~g~s 219 (365)
T 3sr7_A 145 LLLATNIGLDKPYQAGLQAVR---DLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKEVGFGMD 219 (365)
T ss_dssp CCEEEEEETTSCHHHHHHHHH---HHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEECSSCCC
T ss_pred CcEEEEeCCCCCHHHHHHHHH---hcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEECCCCCC
Confidence 457888866555543333333 3456666654211 1222 223567888888876 478877666 48
Q ss_pred hHHHHHHHHcCCcEEecc
Q 015981 250 PEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 250 P~~il~~v~~GvD~FD~~ 267 (397)
|.+...+++.|+|.++..
T Consensus 220 ~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 220 VKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 999999999999999975
No 176
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=29.24 E-value=92 Score=31.19 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=48.4
Q ss_pred HHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 200 AQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
++.+.+.+++.+.|+. ..|.+ ....+.|+++.+..| +.|...-++.++.+...+++.|+|.+..
T Consensus 234 a~~l~~aG~d~I~id~-a~g~~-~~~~~~v~~i~~~~p-~~~Vi~g~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 234 VAALVAAGVDVVVVDT-AHGHS-KGVIERVRWVKQTFP-DVQVIGGNIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHTTCSEEEEEC-SCCSB-HHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHhhcccceEEecc-cCCcc-hhHHHHHHHHHHHCC-CceEEEeeeCcHHHHHHHHHcCCCEEEE
Confidence 5566677899888864 33443 445678888888886 4676554489999999999999999985
No 177
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=29.10 E-value=61 Score=29.13 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=36.2
Q ss_pred HHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 227 SLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 227 ~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
++++.+.+ ..++.++..+-+|.++-.++.+|||.+-+.+|.++.
T Consensus 195 ~~v~~~~~---~G~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P~~~~ 238 (250)
T 3ks6_A 195 GLMAQVQA---AGLDFGCWAAHTPSQITKALDLGVKVFTTDRPTLAI 238 (250)
T ss_dssp HHHHHHHH---TTCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred HHHHHHHH---CCCEEEEEeCCCHHHHHHHHHcCCCEEEcCCHHHHH
Confidence 45555544 367888899999999999999999999999998654
No 178
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=29.06 E-value=22 Score=31.90 Aligned_cols=63 Identities=16% Similarity=0.164 Sum_probs=38.8
Q ss_pred HHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcC-C-CCCCcccccCCCChHHHHHHHHcCCcEEecchhH
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDN-L-PKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIY 270 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~-L-p~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~ 270 (397)
-++...+.|.+-.+.-|+ + .++++.+.+. + ....-.+++|+.+|.++..+.++|+|++ -.||.
T Consensus 77 ~a~~ai~AGA~fivsP~~----~----~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~v-K~FPa 141 (217)
T 3lab_A 77 DFQKAIDAGAQFIVSPGL----T----PELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQL-KCFPA 141 (217)
T ss_dssp HHHHHHHHTCSEEEESSC----C----HHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEE-EETTT
T ss_pred HHHHHHHcCCCEEEeCCC----c----HHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEE-EECcc
Confidence 344555566655554432 2 2455554432 2 0001136789999999999999999998 45774
No 179
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=28.90 E-value=78 Score=27.70 Aligned_cols=63 Identities=6% Similarity=-0.121 Sum_probs=41.9
Q ss_pred HHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccc-ccCCCChHHHHHHHHcCCcEEec
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRM-ICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~-l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
.++.+.+.|++++.+-+.+.. +...++++.+.+. .-++.. +.|+.+|.++..+...|+|.+-.
T Consensus 75 ~~~~~~~aGad~i~vh~~~~~---~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAHI---ATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSCH---HHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhcCCCEEEEecCCCH---HHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHcCccceee
Confidence 456677789999998765421 2234555555442 123333 77889999999999999996544
No 180
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=28.63 E-value=1.7e+02 Score=25.70 Aligned_cols=66 Identities=14% Similarity=0.094 Sum_probs=42.3
Q ss_pred HHHHHhcCCceEEEcCccC-CCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 200 AQEVAVRNVSGYWIGGFGL-GESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~-ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++.+.+.|++.+.+-.... +.......+.++.+.+.. +.|..+. |+-+|.++..+.+.|+|.+-..
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 4555666777766544331 122223356666666654 4677665 7889999999999999976443
No 181
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=28.43 E-value=1.1e+02 Score=27.38 Aligned_cols=61 Identities=23% Similarity=0.250 Sum_probs=40.3
Q ss_pred HHHHhcCCceEEEcCcc-----CCCchhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 201 QEVAVRNVSGYWIGGFG-----LGESMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 201 ~~l~~~~~~G~~IgGl~-----~ge~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
+.+.+.+++.+.+-+.. .|.+ .+.++.+.+.+ +.|.+. -|+.+|.++..+.+.|+|-+=..
T Consensus 163 ~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 163 VEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HHHHHTTCSEEEEEETTTTTTCSCCC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCCCEEEEEeecCCCCcCCCC----HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHcc
Confidence 44455677766654332 2222 45566666654 568764 58999999999999999976554
No 182
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=28.42 E-value=85 Score=30.72 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=62.7
Q ss_pred hhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE-EeecCCCCHHHHHHHHHHHHhcC
Q 015981 129 VEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVF-GSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 129 e~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf-~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
.+.++.....|+|+++. |..... + +. +...++|+++. . .-.++ +.|. . .+.++.+.+.|
T Consensus 146 ~e~~~~lveaGvdvIvl--dta~G~-~-~~----~~e~I~~ik~~---~--~i~Vi~g~V~---t----~e~A~~a~~aG 205 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVL--DSAHGH-S-LN----IIRTLKEIKSK---M--NIDVIVGNVV---T----EEATKELIENG 205 (400)
T ss_dssp CHHHHHHHHHTCSEEEE--CCSCCS-B-HH----HHHHHHHHHTT---C--CCEEEEEEEC---S----HHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEE--eCCCCC-c-cc----HHHHHHHHHhc---C--CCeEEEeecC---C----HHHHHHHHHcC
Confidence 67788888889998854 211111 1 11 12223444321 1 11233 3332 2 23455677789
Q ss_pred CceEEEcCccCCC----------chhhHHHHHHHHHcCCC-CCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 208 VSGYWIGGFGLGE----------SMEERPSLLNAVTDNLP-KDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 208 ~~G~~IgGl~~ge----------~~~~~~~~v~~~~~~Lp-~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++++.+|. ..|. ... ....+..+.+.+. .+.|.+.- |+.++.+|..++++|+|.+=.-
T Consensus 206 AD~I~vG~-g~Gs~~~tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 206 ADGIKVGI-GPGSICTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp CSEEEECC----------CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEEC
T ss_pred CCEEEEeC-CCCcCcccccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEC
Confidence 99998842 2110 011 1234444443332 24566544 8899999999999999976443
No 183
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=28.34 E-value=1.2e+02 Score=27.89 Aligned_cols=85 Identities=16% Similarity=0.029 Sum_probs=53.3
Q ss_pred CeEEeecCCC-CHHHHHHHHHHHHhcCCceEEEcCccCC--------------------CchhhHHHHHHHHHcCCCCCC
Q 015981 182 AVFGSIVGGS-NIEERKRCAQEVAVRNVSGYWIGGFGLG--------------------ESMEERPSLLNAVTDNLPKDW 240 (397)
Q Consensus 182 ~lf~~iqGg~-~~~lR~~sa~~l~~~~~~G~~IgGl~~g--------------------e~~~~~~~~v~~~~~~Lp~~k 240 (397)
.+++-|..|. +.+.=.+.++.+.+. +|++-||. .+. -..+...++++++.+. + +.
T Consensus 17 ~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~-PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~-~~ 92 (271)
T 1ujp_A 17 ALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGL-PYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-T-EK 92 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEEC-CCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-C-CS
T ss_pred eEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECC-CCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-C-CC
Confidence 4666665543 555545566777777 99988864 332 2223445677777766 3 58
Q ss_pred cccccCCCCh-------HHHHHHHHcCCc-EEecchhH
Q 015981 241 PRMICGLGLP-------EEVLQGVAAGVD-LFDSAYIY 270 (397)
Q Consensus 241 pr~l~G~g~P-------~~il~~v~~GvD-~FD~~~p~ 270 (397)
|..+|+-.+| ..+-.+.+.|+| ++-...|.
T Consensus 93 Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ 130 (271)
T 1ujp_A 93 PLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPP 130 (271)
T ss_dssp CEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH
Confidence 8888866555 335557889999 65544543
No 184
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=28.17 E-value=60 Score=28.86 Aligned_cols=69 Identities=12% Similarity=0.041 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChH--HHHHHHHcCCcEEecchhHH
Q 015981 194 EERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPE--EVLQGVAAGVDLFDSAYIYH 271 (397)
Q Consensus 194 ~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~--~il~~v~~GvD~FD~~~p~~ 271 (397)
++-.+.++...+.|.+|++.++. .++ .+..+.+.+|. ......|++ |. ++..++..|.|.+-...|..
T Consensus 115 ~~v~~~a~~a~~~G~~GvV~sat----~~~----e~~~ir~~~~~-f~~v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~ 184 (215)
T 3ve9_A 115 AFYPYLREVARRVNPKGFVAPAT----RPS----MISRVKGDFPD-KLVISPGVG-TQGAKPGIALCHGADYEIVGRSVY 184 (215)
T ss_dssp GGHHHHHHHHHHHCCSEEECCTT----SHH----HHHHHHHHCTT-SEEEECCTT-STTCCTTHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCceeeCCC----CHH----HHHHHHHhCCC-cEEEcCCCC-cCcCCHHHHHHcCCCEEEeCHHHc
Confidence 33344444444567888876542 122 23334445554 333346776 33 45677789999888766543
Q ss_pred h
Q 015981 272 L 272 (397)
Q Consensus 272 ~ 272 (397)
.
T Consensus 185 ~ 185 (215)
T 3ve9_A 185 Q 185 (215)
T ss_dssp T
T ss_pred C
Confidence 3
No 185
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=28.10 E-value=48 Score=29.87 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=35.6
Q ss_pred HHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 227 SLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 227 ~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
++++.+.+ ..++.++..+-+|.++-.++.+|||.+-+.+|.++.
T Consensus 201 ~~v~~~~~---~G~~v~~WTvn~~~~~~~l~~~GVdgIiTD~P~~~~ 244 (252)
T 3qvq_A 201 QQVSDIKA---AGYKVLAFTINDESLALKLYNQGLDAVFSDYPQKIQ 244 (252)
T ss_dssp HHHHHHHH---TTCEEEEECCCCHHHHHHHHHTTCCEEEESSHHHHH
T ss_pred HHHHHHHH---CCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCHHHHH
Confidence 34444443 367788889999999999999999999999998764
No 186
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=28.04 E-value=1.5e+02 Score=29.40 Aligned_cols=70 Identities=13% Similarity=0.147 Sum_probs=41.8
Q ss_pred HHHHHHHhcCCceEEEcCccCCC----------chhhHHHHHHHHHcCCC-CCCccccc-CCCChHHHHHHHHcCCcEEe
Q 015981 198 RCAQEVAVRNVSGYWIGGFGLGE----------SMEERPSLLNAVTDNLP-KDWPRMIC-GLGLPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 198 ~sa~~l~~~~~~G~~IgGl~~ge----------~~~~~~~~v~~~~~~Lp-~~kpr~l~-G~g~P~~il~~v~~GvD~FD 265 (397)
+.++.+.+.|++++.+| .+.|. ... ..+.+..+....+ .+.|.+.- |+.++.++..++++|+|..-
T Consensus 286 ~~a~~~~~~Gad~I~vg-~g~g~~~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~ 363 (491)
T 1zfj_A 286 EGARALYDAGVDVVKVG-IGPGSICTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVM 363 (491)
T ss_dssp HHHHHHHHTTCSEEEEC-SSCCTTBCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEC-ccCCcceEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCccee
Confidence 44556677899999885 22110 000 1122222222111 14565543 89999999999999999877
Q ss_pred cchh
Q 015981 266 SAYI 269 (397)
Q Consensus 266 ~~~p 269 (397)
..-+
T Consensus 364 vG~~ 367 (491)
T 1zfj_A 364 LGSM 367 (491)
T ss_dssp ESTT
T ss_pred eCHH
Confidence 6544
No 187
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=27.42 E-value=62 Score=28.49 Aligned_cols=66 Identities=12% Similarity=0.018 Sum_probs=40.3
Q ss_pred HHHHHhcCCceE--EEcCccCCCc--hhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecch
Q 015981 200 AQEVAVRNVSGY--WIGGFGLGES--MEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 200 a~~l~~~~~~G~--~IgGl~~ge~--~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
++...+.+++.+ .+.|...+.. ...-.+.++.+.+. +.|...- |+.++.++..+.+.|+|.+-...
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~~~Gad~v~vGs 216 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA---GIAVIAEGKIHSPEEAKKINDLGVAGIVVGG 216 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHCCCCEEEEch
Confidence 344455677766 3555432210 01113445555553 5676654 78889999999999999887653
No 188
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=27.30 E-value=88 Score=27.85 Aligned_cols=55 Identities=15% Similarity=0.248 Sum_probs=37.2
Q ss_pred HHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 202 EVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 202 ~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
...+.|.+|...++ .+ .++++.+.. +. .| ++.|+.+|.++..+.+.|+|.+=. ||
T Consensus 84 ~A~~aGAd~v~~p~----~d----~~v~~~ar~-~g--~~-~i~Gv~t~~e~~~A~~~Gad~vk~-Fp 138 (224)
T 1vhc_A 84 LAKSSGADFVVTPG----LN----PKIVKLCQD-LN--FP-ITPGVNNPMAIEIALEMGISAVKF-FP 138 (224)
T ss_dssp HHHHHTCSEEECSS----CC----HHHHHHHHH-TT--CC-EECEECSHHHHHHHHHTTCCEEEE-TT
T ss_pred HHHHCCCCEEEECC----CC----HHHHHHHHH-hC--CC-EEeccCCHHHHHHHHHCCCCEEEE-ee
Confidence 33445788885553 22 244555555 32 23 466999999999999999998765 77
No 189
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=27.03 E-value=70 Score=29.74 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=35.8
Q ss_pred HHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 227 SLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 227 ~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
++|+.+.+ ..++.++..+-+|.++-.++.+|||.+-+.+|.++.
T Consensus 259 ~~v~~~~~---~Gl~V~~WTVn~~~~~~~l~~~GVDgIiTD~P~~~~ 302 (313)
T 3l12_A 259 ELVAEAHD---LGLIVLTWTVNEPEDIRRMATTGVDGIVTDYPGRTQ 302 (313)
T ss_dssp HHHHHHHH---TTCEEEEBCCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred HHHHHHHH---CCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCHHHHH
Confidence 44554443 367888899999999999999999999999998654
No 190
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=25.98 E-value=4.2e+02 Score=24.92 Aligned_cols=115 Identities=11% Similarity=0.122 Sum_probs=62.7
Q ss_pred ChhhHHHHHHhcCCcEEEE-cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHH-HHHHHHHHHH
Q 015981 127 KPVEYMEMITSMKPNLWAT-LADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIE-ERKRCAQEVA 204 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~-L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~-lR~~sa~~l~ 204 (397)
.+++.++.....|.|..+. +.-..+...+.+.........-+|+.++.+.++..-.-|+.|-- .+.+ ..++..+.+.
T Consensus 74 ~~~~rl~~MD~~GI~~~Vls~~~~~~~~~~~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~-~~~~~a~~El~r~~~ 152 (357)
T 3nur_A 74 HHDERIQFMNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPI-NEPEAAAREFERCIN 152 (357)
T ss_dssp CHHHHHHHHHHTTEEEEEEEECTTCGGGSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCT-TSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCcEEEEeCCCCccccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEeCCC-CCHHHHHHHHHHHHh
Confidence 5799999999999999654 32111122344555555666678888887765432113344421 1332 2222222234
Q ss_pred hcCCceEEEcCccCCC--chhhHHHHHHHHHcCCCCCCccccc
Q 015981 205 VRNVSGYWIGGFGLGE--SMEERPSLLNAVTDNLPKDWPRMIC 245 (397)
Q Consensus 205 ~~~~~G~~IgGl~~ge--~~~~~~~~v~~~~~~Lp~~kpr~l~ 245 (397)
+.|+.|+.+.+...+. +...+..+.+.+.+. +.|.+++
T Consensus 153 ~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~---g~pV~iH 192 (357)
T 3nur_A 153 DLGFKGALIMGRAQDGFLDQDKYDIIFKTAENL---DVPIYLH 192 (357)
T ss_dssp TTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHH---TCCEEEE
T ss_pred hcCceEEEeCCCCCCCCCCCccHHHHHHHHHhc---CCeEEEe
Confidence 6799999887533221 113445555555443 5666665
No 191
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=25.64 E-value=1.8e+02 Score=26.53 Aligned_cols=72 Identities=6% Similarity=-0.061 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCc---hhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEe
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGES---MEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFD 265 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~---~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD 265 (397)
...+...+.++.+.+.|++-+-+|++..++- .....++++.+.+. | +-+.-++. .+..++-.+++.|+|.+-
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~-~~~v~~l~-~n~~~i~~a~~~G~~~V~ 97 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-D-GVRYSVLV-PNMKGYEAAAAAHADEIA 97 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-S-SSEEEEEC-SSHHHHHHHHHTTCSEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-C-CCEEEEEe-CCHHHHHHHHHCCCCEEE
Confidence 4667778888999999999988887654431 11345666655443 2 23332443 689999999999999543
No 192
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=25.63 E-value=1.8e+02 Score=27.65 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=40.0
Q ss_pred HHHHHHhcCCceEEEcCccCC--Cchh-------hHHHHHHHHHcCCCC-CCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 199 CAQEVAVRNVSGYWIGGFGLG--ESME-------ERPSLLNAVTDNLPK-DWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~g--e~~~-------~~~~~v~~~~~~Lp~-~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
-++.+.+.|++++.++. +.| +... .....+..+.+..+. +.|.+.- |+.+|.+|..++++|.|..=.-
T Consensus 174 ~A~~a~~aGaD~I~v~~-g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 174 MVEELILSGADIIKVGI-GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp HHHHHHHTTCSEEEECS-SCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHhCCCEEEECC-CCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceecc
Confidence 45567778999998852 211 1000 011122222222111 3454332 9999999999999999977655
Q ss_pred hh
Q 015981 268 YI 269 (397)
Q Consensus 268 ~p 269 (397)
-+
T Consensus 253 ~~ 254 (351)
T 2c6q_A 253 GM 254 (351)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 193
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=25.50 E-value=1e+02 Score=29.25 Aligned_cols=71 Identities=15% Similarity=0.124 Sum_probs=46.8
Q ss_pred HHHHHHHHhcCCceEEEcCccC--CCch-------hhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEec
Q 015981 197 KRCAQEVAVRNVSGYWIGGFGL--GESM-------EERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~IgGl~~--ge~~-------~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~ 266 (397)
.+.++.+.+.|++++.+.|-.. |-+. ...++.+..+.+.+| +.|...- |+.+|.++..+++ |+|.+=.
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPVianGgI~s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTFVTNGGIRSLEEALFHLK-RVDGVML 224 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHT-TSSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC-CCeEEEECCcCCHHHHHHHHh-CCCEEEE
Confidence 3456777788999999876421 1110 012456666666665 5676654 7789999999998 9887765
Q ss_pred chh
Q 015981 267 AYI 269 (397)
Q Consensus 267 ~~p 269 (397)
.-+
T Consensus 225 GRa 227 (350)
T 3b0p_A 225 GRA 227 (350)
T ss_dssp CHH
T ss_pred CHH
Confidence 543
No 194
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=25.38 E-value=86 Score=27.68 Aligned_cols=68 Identities=13% Similarity=0.151 Sum_probs=41.1
Q ss_pred HHHHHHhcCCceEEEcCccCCCch-hhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHc---CCcEEecch
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESM-EERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAA---GVDLFDSAY 268 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~-~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~---GvD~FD~~~ 268 (397)
.++.+.+.+++.+.+-+...+... ..-.+.++.+.+.+ +.|...- |+.+|.++..+.+. |+|.+-...
T Consensus 151 ~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 151 TLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp HHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 345566677777665443211100 01134555555554 4677654 88999999999999 999876653
No 195
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=25.36 E-value=90 Score=30.11 Aligned_cols=66 Identities=17% Similarity=0.225 Sum_probs=39.1
Q ss_pred HHHHHhcCCceEEEcCccCCCc----------hhhHHHHHHHHHcCCC-CCCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 200 AQEVAVRNVSGYWIGGFGLGES----------MEERPSLLNAVTDNLP-KDWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~ge~----------~~~~~~~v~~~~~~Lp-~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++.+.+.|++++.+|+ +.|.. ..+ ...|..+.+..+ .+.|.+.- |+.+|.+|..++++|+|.+=..
T Consensus 163 A~~a~~aGAD~I~vG~-gpGs~~~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 163 ARALIEAGVSAVKVGI-GPGSICTTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp HHHHHHHTCSEEEECS-SCSTTBCHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEec-CCCCCCCcccccCcccch-HHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 4556677999998842 22210 011 223333332111 14565433 8999999999999999976544
No 196
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=25.28 E-value=79 Score=27.44 Aligned_cols=65 Identities=15% Similarity=0.054 Sum_probs=40.9
Q ss_pred HHhcCCceEEEcCccCC---C--chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchh
Q 015981 203 VAVRNVSGYWIGGFGLG---E--SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 203 l~~~~~~G~~IgGl~~g---e--~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
..+.+++.+.+|.+... . ....-.+.++.+.+.++ +.|.++. |+. |.++..+.+.|+|.++....
T Consensus 132 a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 202 (227)
T 2tps_A 132 AEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-IDNAAPVIQAGADGVSMISA 202 (227)
T ss_dssp HHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-TTTSHHHHHTTCSEEEESHH
T ss_pred HHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHH
Confidence 44567888876432211 0 01112345566665554 4787765 565 99999999999999998743
No 197
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=25.26 E-value=59 Score=28.60 Aligned_cols=44 Identities=11% Similarity=-0.043 Sum_probs=36.0
Q ss_pred HHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 227 SLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 227 ~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
++++.+.+ ..++.++.++-+|.++-.++.+|||.+-+.+|....
T Consensus 177 ~~v~~~~~---~G~~v~~wtvn~~~~~~~l~~~GvdgI~TD~p~~~~ 220 (224)
T 1vd6_A 177 EAVAGWRK---RGLFVVAWTVNEEGEARRLLALGLDGLIGDRPEVLL 220 (224)
T ss_dssp HHHHHHHH---TTCEEEEECCCCHHHHHHHHHTTCSEEEESCHHHHT
T ss_pred HHHHHHHH---CCCEEEEEeCCCHHHHHHHHhcCCCEEEcCCHHHHH
Confidence 45555443 367888899999999999999999999999998654
No 198
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=24.92 E-value=1.2e+02 Score=26.93 Aligned_cols=63 Identities=11% Similarity=0.053 Sum_probs=38.4
Q ss_pred HHHhcCCceEEEc--CccCCC-chhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 202 EVAVRNVSGYWIG--GFGLGE-SMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 202 ~l~~~~~~G~~Ig--Gl~~ge-~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
...+.|++.+.+. |+..+. ....-.++++.+.+. +.|... -|+.+|.++..+.++|+|-+=.-
T Consensus 144 ~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 144 ACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp HHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 4456788776542 332110 001113455555553 577764 48899999999999999976544
No 199
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=24.85 E-value=1.3e+02 Score=26.84 Aligned_cols=63 Identities=6% Similarity=0.056 Sum_probs=38.7
Q ss_pred HHHhcCCceEEEc--CccCC-CchhhHHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 202 EVAVRNVSGYWIG--GFGLG-ESMEERPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 202 ~l~~~~~~G~~Ig--Gl~~g-e~~~~~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
...+.|++.+.+. |+..+ .....-.++++.+.+. +.|... -|+.+|.++..+.++|+|-+=.-
T Consensus 144 ~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 144 SCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp HHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 3445788877542 33211 0001113556655553 677764 48999999999999999976544
No 200
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=24.82 E-value=2.8e+02 Score=25.73 Aligned_cols=74 Identities=16% Similarity=0.026 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhcCCceEEEcCccC-------CCchhhHHHHHHHHHcCC-------CCCCcccc-cCC-CChHHH---
Q 015981 193 IEERKRCAQEVAVRNVSGYWIGGFGL-------GESMEERPSLLNAVTDNL-------PKDWPRMI-CGL-GLPEEV--- 253 (397)
Q Consensus 193 ~~lR~~sa~~l~~~~~~G~~IgGl~~-------ge~~~~~~~~v~~~~~~L-------p~~kpr~l-~G~-g~P~~i--- 253 (397)
.+.-.++++.+.+ +++++.|-..+. .++.+...++++++.+.. +.+.|..+ +.. .+..++
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 4455566766655 788887753221 122334467777776665 34677653 222 233342
Q ss_pred -HHHHHcCCcEEecc
Q 015981 254 -LQGVAAGVDLFDSA 267 (397)
Q Consensus 254 -l~~v~~GvD~FD~~ 267 (397)
-.+.+.|+|.++.+
T Consensus 231 a~~l~~~Gvd~i~vs 245 (336)
T 1f76_A 231 ADSLVRHNIDGVIAT 245 (336)
T ss_dssp HHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCcEEEEe
Confidence 44567999999976
No 201
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=24.74 E-value=1.9e+02 Score=26.73 Aligned_cols=92 Identities=11% Similarity=0.122 Sum_probs=51.7
Q ss_pred CCCC--HHHHHHHHHHHHhcCCceEEEcCccC--C----CchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcC
Q 015981 189 GGSN--IEERKRCAQEVAVRNVSGYWIGGFGL--G----ESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAG 260 (397)
Q Consensus 189 Gg~~--~~lR~~sa~~l~~~~~~G~~IgGl~~--g----e~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~G 260 (397)
||.+ .+.-.+-++++.+.|.+-+=|||-+. | ...+|+.+++..+......+.|. -.-..+|.-+-.|++.|
T Consensus 22 gg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~pi-SIDT~~~~va~aAl~aG 100 (280)
T 1eye_A 22 GGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITV-SIDTMRADVARAALQNG 100 (280)
T ss_dssp SCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCE-EEECSCHHHHHHHHHTT
T ss_pred CcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEE-EEeCCCHHHHHHHHHcC
Confidence 5533 33333345677778999999998652 2 11244544443222211114453 23567899999999999
Q ss_pred CcEEecchhH--------Hhhhcceeecc
Q 015981 261 VDLFDSAYIY--------HLTIGGFALTF 281 (397)
Q Consensus 261 vD~FD~~~p~--------~~a~~G~al~f 281 (397)
+|++-++... ..++.|..++.
T Consensus 101 a~iINdvsg~~~d~~m~~~~a~~~~~vVl 129 (280)
T 1eye_A 101 AQMVNDVSGGRADPAMGPLLAEADVPWVL 129 (280)
T ss_dssp CCEEEETTTTSSCTTHHHHHHHHTCCEEE
T ss_pred CCEEEECCCCCCCHHHHHHHHHhCCeEEE
Confidence 9999776432 24566666654
No 202
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=24.19 E-value=1.5e+02 Score=28.36 Aligned_cols=70 Identities=17% Similarity=0.106 Sum_probs=42.3
Q ss_pred HHHHHhcCCceEEEcCccC---------CCch-hhHHHHHHHHH---cCCCC-CCccccc-CCCChHHHHHHHHcCCcEE
Q 015981 200 AQEVAVRNVSGYWIGGFGL---------GESM-EERPSLLNAVT---DNLPK-DWPRMIC-GLGLPEEVLQGVAAGVDLF 264 (397)
Q Consensus 200 a~~l~~~~~~G~~IgGl~~---------ge~~-~~~~~~v~~~~---~~Lp~-~kpr~l~-G~g~P~~il~~v~~GvD~F 264 (397)
++.+.+.|++++.+| .+. |.+. +...++.+... +.+.. +.|.+.- |+.++.|+..++++|+|.+
T Consensus 225 a~~~~~~Gad~i~vg-~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V 303 (393)
T 2qr6_A 225 ALHMMRTGAVGIIVG-GGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAV 303 (393)
T ss_dssp HHHHHTTTCSEEEES-CCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHcCCCEEEEC-CCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 566778899999994 311 2221 11222222211 11222 2566554 8889999999999999987
Q ss_pred ecchhH
Q 015981 265 DSAYIY 270 (397)
Q Consensus 265 D~~~p~ 270 (397)
=..-+.
T Consensus 304 ~iG~~~ 309 (393)
T 2qr6_A 304 VLGSPL 309 (393)
T ss_dssp EECGGG
T ss_pred EECHHH
Confidence 766553
No 203
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=24.18 E-value=1.1e+02 Score=26.80 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=41.6
Q ss_pred HHHHHHhcCCceEEEcCccCCCch-hhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHc---CCcEEecch
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGESM-EERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAA---GVDLFDSAY 268 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~~-~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~---GvD~FD~~~ 268 (397)
.++.+.+.+++.+.+-+...+... ..-.+.++.+.+.+ +.|...- |+.+|.++..+.+. |+|.+=...
T Consensus 154 ~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~ 226 (244)
T 2y88_A 154 VLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGK 226 (244)
T ss_dssp HHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcH
Confidence 345555677777766443321100 01134555555543 5677654 88999999999998 999776553
No 204
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=23.80 E-value=97 Score=27.05 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=35.0
Q ss_pred HHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 203 VAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 203 l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
..+.+.++...++. + .++++.+.. + ..| ++.|+.+|.++..+.+.|+|.+=. ||
T Consensus 79 A~~~GAd~v~~~~~----d----~~v~~~~~~-~--g~~-~i~G~~t~~e~~~A~~~Gad~v~~-fp 132 (207)
T 2yw3_A 79 ALEAGAAFLVSPGL----L----EEVAALAQA-R--GVP-YLPGVLTPTEVERALALGLSALKF-FP 132 (207)
T ss_dssp HHHHTCSEEEESSC----C----HHHHHHHHH-H--TCC-EEEEECSHHHHHHHHHTTCCEEEE-TT
T ss_pred HHHcCCCEEEcCCC----C----HHHHHHHHH-h--CCC-EEecCCCHHHHHHHHHCCCCEEEE-ec
Confidence 34457887765542 2 133333332 1 122 467999999999999999998844 77
No 205
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=23.43 E-value=4.7e+02 Score=24.66 Aligned_cols=83 Identities=16% Similarity=0.009 Sum_probs=51.4
Q ss_pred CeEEeecCCCCHHHHHHHHHHHHhcCCc-eEEEc--------CccCCCchhhHHHHHHHHHcCCCCCCcccc-cCC-CCh
Q 015981 182 AVFGSIVGGSNIEERKRCAQEVAVRNVS-GYWIG--------GFGLGESMEERPSLLNAVTDNLPKDWPRMI-CGL-GLP 250 (397)
Q Consensus 182 ~lf~~iqGg~~~~lR~~sa~~l~~~~~~-G~~Ig--------Gl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l-~G~-g~P 250 (397)
.++..| +|.+.+.-.++++.+.+.+++ ++-|- |-.++.+++...++++++.+.. ++|..+ +.. -++
T Consensus 130 pvivsI-~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~--~~PV~vKi~p~~~~ 206 (345)
T 3oix_A 130 NHFLSL-VGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF--TKPLGIKLPPYFDI 206 (345)
T ss_dssp CCEEEE-CCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCCH
T ss_pred CEEEEe-cCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh--CCCeEEEECCCCCH
Confidence 355555 456777777889888766766 55542 1123345566788888888775 478653 222 367
Q ss_pred HHHHHHHH----cCCcEEecc
Q 015981 251 EEVLQGVA----AGVDLFDSA 267 (397)
Q Consensus 251 ~~il~~v~----~GvD~FD~~ 267 (397)
.++...++ .|+|+|.+.
T Consensus 207 ~~~a~~~~~aga~~i~~int~ 227 (345)
T 3oix_A 207 VHFDQAAAIFNXYPLTFVNCI 227 (345)
T ss_dssp HHHHHHHHHHTTSCCSEEEEC
T ss_pred HHHHHHHHHhCCCceEEEEee
Confidence 77766653 456666554
No 206
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=23.36 E-value=4.2e+02 Score=24.09 Aligned_cols=115 Identities=16% Similarity=0.140 Sum_probs=61.8
Q ss_pred eecChhhHHHHHHhcCCcEEEEcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE--eecCCCCHH-HHHH
Q 015981 124 RLIKPVEYMEMITSMKPNLWATLADEV--PAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFG--SIVGGSNIE-ERKR 198 (397)
Q Consensus 124 ~~ltpe~~~~~q~~i~pDi~~~L~d~~--~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~--~iqGg~~~~-lR~~ 198 (397)
..++++++++.....|.|..+...-.. .+..+.+..........+|+.+..+.++. .+.+ .|.- .+.+ ...+
T Consensus 56 ~~~~~~~~l~~m~~~GV~~~V~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~--r~~~~~~l~~-~~~~~a~~e 132 (334)
T 2hbv_A 56 ALWDPAFRIEEMDAQGVDVQVTCATPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQ--RIKVLAQVPL-QDLDLACKE 132 (334)
T ss_dssp GGTCHHHHHHHHHHHTCSEEEEEECGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTT--TEEECBCCCT-TSHHHHHHH
T ss_pred ccCCHHHHHHHHHHCCCCEEEECCCchhccCCCCHHHHHHHHHHHHHHHHHHHhhCCC--eEEEEEecCc-cCHHHHHHH
Confidence 467899999999999999987762211 11223444444445566787776654331 2333 2221 1221 1122
Q ss_pred HHHHHHhcCCceEEEcCccCCCc--hhhHHHHHHHHHcCCCCCCccccc
Q 015981 199 CAQEVAVRNVSGYWIGGFGLGES--MEERPSLLNAVTDNLPKDWPRMIC 245 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~ge~--~~~~~~~v~~~~~~Lp~~kpr~l~ 245 (397)
++.+.+.++.|+.|+....+.. .+.+..+++.+.+. +.|.+++
T Consensus 133 -l~~~~~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~---~lpv~iH 177 (334)
T 2hbv_A 133 -ASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANE---DIPILVH 177 (334)
T ss_dssp -HHHHHHHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHT---TCCEEEE
T ss_pred -HHHHHHcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHC---CCEEEEC
Confidence 2222356889988875443321 23455666555432 5666554
No 207
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=23.11 E-value=61 Score=28.90 Aligned_cols=35 Identities=11% Similarity=0.131 Sum_probs=31.5
Q ss_pred CCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 239 DWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 239 ~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
..+.++..+-+|.++-.++.+|||.+-+.+|.++.
T Consensus 196 G~~v~~WTVn~~~~~~~l~~~GVdgIiTD~P~~~~ 230 (238)
T 3no3_A 196 GMTSNVWTVDDPKLMEEMIDMGVDFITTDLPEETQ 230 (238)
T ss_dssp TCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHcCCCEEECCCHHHHH
Confidence 56778889999999999999999999999998654
No 208
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=23.04 E-value=1.1e+02 Score=26.15 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=40.4
Q ss_pred HHhcCCceEEEcCccCCC----chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcCCcEEecchh
Q 015981 203 VAVRNVSGYWIGGFGLGE----SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 203 l~~~~~~G~~IgGl~~ge----~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
..+.+++.+.++++..+. ....-.+.++.+.+.+ +.|.++. |+. |.++..+.+.|+|.++....
T Consensus 124 ~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 124 AEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVISA 192 (215)
T ss_dssp HHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESHH
T ss_pred HHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHH
Confidence 345678888876532110 0111244555555444 5677765 565 99999999999999998743
No 209
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=23.00 E-value=1.2e+02 Score=26.71 Aligned_cols=55 Identities=24% Similarity=0.293 Sum_probs=36.8
Q ss_pred HHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 202 EVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 202 ~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
...+.|.+|...++. + .++++.+.. +. +-++.|+.+|.++..+.+.|+|.+=. ||
T Consensus 83 ~A~~aGAd~v~~p~~----d----~~v~~~~~~-~g---~~~i~G~~t~~e~~~A~~~Gad~v~~-Fp 137 (214)
T 1wbh_A 83 EVTEAGAQFAISPGL----T----EPLLKAATE-GT---IPLIPGISTVSELMLGMDYGLKEFKF-FP 137 (214)
T ss_dssp HHHHHTCSCEEESSC----C----HHHHHHHHH-SS---SCEEEEESSHHHHHHHHHTTCCEEEE-TT
T ss_pred HHHHcCCCEEEcCCC----C----HHHHHHHHH-hC---CCEEEecCCHHHHHHHHHCCCCEEEE-ec
Confidence 344567888876542 2 234444443 21 33467999999999999999998765 77
No 210
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=22.93 E-value=3.4e+02 Score=25.94 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=49.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCcc--------CCCc-hh-hHHHHHHHHHcCCCCCCcccccCC---CChHHHHH
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFG--------LGES-ME-ERPSLLNAVTDNLPKDWPRMICGL---GLPEEVLQ 255 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~--------~ge~-~~-~~~~~v~~~~~~Lp~~kpr~l~G~---g~P~~il~ 255 (397)
||+..+.-+++++.+ +.++..|. +. .|+. .. ...+.|+++.+.+ +.|..+=++ -+|.+...
T Consensus 133 ~~~~~~~~~~av~~~---~a~al~Ih-ln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~--~vPVivK~vG~g~s~~~A~~ 206 (368)
T 3vkj_A 133 KGYGLKEFQDAIQMI---EADAIAVH-LNPAQEVFQPEGEPEYQIYALEKLRDISKEL--SVPIIVKESGNGISMETAKL 206 (368)
T ss_dssp TTCCHHHHHHHHHHT---TCSEEEEE-CCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC--SSCEEEECSSSCCCHHHHHH
T ss_pred CCCCHHHHHHHHHHh---cCCCeEEE-ecchhhhhCCCCCchhhHHHHHHHHHHHHHc--CCCEEEEeCCCCCCHHHHHH
Confidence 347777777777665 34555553 11 1222 11 2577888888887 489877655 38999999
Q ss_pred HHHcCCcEEecc
Q 015981 256 GVAAGVDLFDSA 267 (397)
Q Consensus 256 ~v~~GvD~FD~~ 267 (397)
+.+.|+|.++..
T Consensus 207 l~~aGad~I~V~ 218 (368)
T 3vkj_A 207 LYSYGIKNFDTS 218 (368)
T ss_dssp HHHTTCCEEECC
T ss_pred HHhCCCCEEEEe
Confidence 999999999974
No 211
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=22.89 E-value=96 Score=27.62 Aligned_cols=55 Identities=22% Similarity=0.316 Sum_probs=36.5
Q ss_pred HHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 202 EVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 202 ~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
...+.|.+|...|+. + .++++.+.. +. +.++.|+.+|.++..+.+.|+|.+=. ||
T Consensus 93 ~A~~aGAd~v~~p~~----d----~~v~~~~~~-~g---~~~i~G~~t~~e~~~A~~~Gad~vk~-FP 147 (225)
T 1mxs_A 93 AVEAAGAQFVVTPGI----T----EDILEAGVD-SE---IPLLPGISTPSEIMMGYALGYRRFKL-FP 147 (225)
T ss_dssp HHHHHTCSSEECSSC----C----HHHHHHHHH-CS---SCEECEECSHHHHHHHHTTTCCEEEE-TT
T ss_pred HHHHCCCCEEEeCCC----C----HHHHHHHHH-hC---CCEEEeeCCHHHHHHHHHCCCCEEEE-cc
Confidence 334457778765542 2 234444433 22 33467999999999999999998765 88
No 212
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=22.50 E-value=4.4e+02 Score=23.93 Aligned_cols=115 Identities=13% Similarity=0.064 Sum_probs=61.5
Q ss_pred eecChhhHHHHHHhcCCcEEEEcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE--eecCCCCHH-HHHH
Q 015981 124 RLIKPVEYMEMITSMKPNLWATLADEV--PAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFG--SIVGGSNIE-ERKR 198 (397)
Q Consensus 124 ~~ltpe~~~~~q~~i~pDi~~~L~d~~--~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~--~iqGg~~~~-lR~~ 198 (397)
..++++++++.....|.|..+...-.. .+..+.+...........|+.+..+.++. .+.+ .|.- .+.+ ...+
T Consensus 52 ~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~--r~~~~~~l~~-~~~~~a~~e 128 (336)
T 2wm1_A 52 NCWDPEVRIREMDQKGVTVQALSTVPVMFSYWAKPEDTLNLCQLLNNDLASTVVSYPR--RFVGLGTLPM-QAPELAVKE 128 (336)
T ss_dssp GGTCHHHHHHHHHHHTCCEEEEECCGGGGCTTSCHHHHHHHHHHHHHHHHHHHHHSTT--TEEEEECCCT-TSHHHHHHH
T ss_pred ccCCHHHHHHHHHHCCCCEEEECCCchhhcccCCHHHHHHHHHHHHHHHHHHHHhccC--ceeEEEeCCC-cCHHHHHHH
Confidence 567899999999999999987762211 01223444444445567788777665432 2333 2322 1221 1121
Q ss_pred HHHHHH-hcCCceEEEcCccCCC--chhhHHHHHHHHHcCCCCCCccccc
Q 015981 199 CAQEVA-VRNVSGYWIGGFGLGE--SMEERPSLLNAVTDNLPKDWPRMIC 245 (397)
Q Consensus 199 sa~~l~-~~~~~G~~IgGl~~ge--~~~~~~~~v~~~~~~Lp~~kpr~l~ 245 (397)
++.+. +.++.|+.++....+. +.+.+..+++.+.+. +.|.+++
T Consensus 129 -l~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~---~lpv~iH 174 (336)
T 2wm1_A 129 -MERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERL---KCSLFVH 174 (336)
T ss_dssp -HHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHH---TCEEEEE
T ss_pred -HHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHc---CCEEEEC
Confidence 22223 5689999876543332 113345556554432 4555544
No 213
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=22.46 E-value=2.8e+02 Score=24.96 Aligned_cols=116 Identities=14% Similarity=-0.006 Sum_probs=69.1
Q ss_pred cChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCHHHHHHHHHHHHh
Q 015981 126 IKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAV 205 (397)
Q Consensus 126 ltpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~~lR~~sa~~l~~ 205 (397)
++|.++.+..+.-|++.+-.++|..-...+.+.++. +.+. . +-++ ...++.-.+.+ +.+...
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~-i~~~----------v--~lPv--l~kdfI~d~~q---i~~a~~ 126 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKR-VREA----------V--DLPL--LRKDFVVDPFM---LEEARA 126 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHH-HHHH----------C--CSCE--EEESCCCSHHH---HHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHH-HHHh----------c--CCCE--EECCcCCCHHH---HHHHHH
Confidence 899999999999999999988665433323332222 2111 0 1111 12343333333 344556
Q ss_pred cCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 206 RNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 206 ~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
.|.++..++.-... ++..+++..+.. +. .-.+.-+.+..++..+..+|.|++=.
T Consensus 127 ~GAD~VlL~~~~l~---~~l~~l~~~a~~-lG---l~~lvev~~~~E~~~a~~~gad~IGv 180 (254)
T 1vc4_A 127 FGASAALLIVALLG---ELTGAYLEEARR-LG---LEALVEVHTERELEIALEAGAEVLGI 180 (254)
T ss_dssp TTCSEEEEEHHHHG---GGHHHHHHHHHH-HT---CEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred cCCCEEEECccchH---HHHHHHHHHHHH-CC---CeEEEEECCHHHHHHHHHcCCCEEEE
Confidence 89999998765432 455566654432 22 11133467888999999999998743
No 214
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=22.38 E-value=1.1e+02 Score=29.32 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccC-CC-----chhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC-Cc
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGL-GE-----SMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG-VD 262 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~-ge-----~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G-vD 262 (397)
...+.-.+.++.+.+.+++.+-+.+-.. .. ......+.++.+.+.+ +.|...- |+.+|.+...+++.| +|
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~GgI~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA--KLPVTSAWGFGTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCCEEECSSTTSHHHHHHHHHTTSCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHCCCcc
Confidence 4444445567888888999887754211 10 1111234444444443 3565554 455899999999999 99
Q ss_pred EEecchh
Q 015981 263 LFDSAYI 269 (397)
Q Consensus 263 ~FD~~~p 269 (397)
++=..-+
T Consensus 321 ~V~iGR~ 327 (363)
T 3l5l_A 321 LVSVGRA 327 (363)
T ss_dssp EEECCHH
T ss_pred EEEecHH
Confidence 8865544
No 215
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=22.10 E-value=2.2e+02 Score=25.42 Aligned_cols=41 Identities=27% Similarity=0.251 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecc
Q 015981 225 RPSLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 225 ~~~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~ 267 (397)
..+.++.+.+.. +.|..+ .|+.+|.++..+...|+|.+-..
T Consensus 189 ~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 445666666554 467654 68889999999999999987655
No 216
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=21.86 E-value=1.7e+02 Score=27.92 Aligned_cols=78 Identities=12% Similarity=0.080 Sum_probs=49.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCccccc-CCCChHHHHHHHHcC-CcEEec
Q 015981 189 GGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMIC-GLGLPEEVLQGVAAG-VDLFDS 266 (397)
Q Consensus 189 Gg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~-G~g~P~~il~~v~~G-vD~FD~ 266 (397)
++...+.-.+.++.+.+.+++.+.+.+-........-.+.++.+.+.+ +.|.... |+ +|++...+++.| +|++=.
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY--QGVLIYAGRY-NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHC--CCcEEEeCCC-CHHHHHHHHHCCCcceehh
Confidence 344444455667888888999998876321001110124455555555 3576655 45 999999999998 998865
Q ss_pred chh
Q 015981 267 AYI 269 (397)
Q Consensus 267 ~~p 269 (397)
.-+
T Consensus 322 gR~ 324 (365)
T 2gou_A 322 GRP 324 (365)
T ss_dssp CHH
T ss_pred cHH
Confidence 543
No 217
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=21.60 E-value=1.6e+02 Score=28.66 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=51.4
Q ss_pred eEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCc
Q 015981 183 VFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVD 262 (397)
Q Consensus 183 lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD 262 (397)
.+++..|-.+ .+-++.+.+.+++-+.|+- ..|.+ +...+.|+++.+.+ +.|...-++.++.+...+++.|+|
T Consensus 136 ~v~~~v~~~~----~e~~~~lveaGvdvIvldt-a~G~~-~~~~e~I~~ik~~~--~i~Vi~g~V~t~e~A~~a~~aGAD 207 (400)
T 3ffs_A 136 RVGAAIGVNE----IERAKLLVEAGVDVIVLDS-AHGHS-LNIIRTLKEIKSKM--NIDVIVGNVVTEEATKELIENGAD 207 (400)
T ss_dssp CCEEEECCC-----CHHHHHHHHHTCSEEEECC-SCCSB-HHHHHHHHHHHTTC--CCEEEEEEECSHHHHHHHHHTTCS
T ss_pred eEEeecCCCH----HHHHHHHHHcCCCEEEEeC-CCCCc-ccHHHHHHHHHhcC--CCeEEEeecCCHHHHHHHHHcCCC
Confidence 3444445443 3446677778898887742 23433 34567777777766 355544478999999999999999
Q ss_pred EEec
Q 015981 263 LFDS 266 (397)
Q Consensus 263 ~FD~ 266 (397)
.+..
T Consensus 208 ~I~v 211 (400)
T 3ffs_A 208 GIKV 211 (400)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 218
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=21.44 E-value=1.2e+02 Score=27.51 Aligned_cols=41 Identities=17% Similarity=0.279 Sum_probs=30.1
Q ss_pred HHHHHHHcCCCCCCcccc-cCCCChHHHHHHHHcCCcEEecchh
Q 015981 227 SLLNAVTDNLPKDWPRMI-CGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 227 ~~v~~~~~~Lp~~kpr~l-~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
+.++.+.+. .+.|..+ .|+.+|.++..+++.|+|.+-....
T Consensus 168 ~~l~~i~~~--~~iPviv~gGI~t~eda~~~~~~GAdgViVGSA 209 (264)
T 1xm3_A 168 LNLSFIIEQ--AKVPVIVDAGIGSPKDAAYAMELGADGVLLNTA 209 (264)
T ss_dssp HHHHHHHHH--CSSCBEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 345555543 2678765 5999999999999999998766543
No 219
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=21.25 E-value=1.8e+02 Score=25.90 Aligned_cols=77 Identities=17% Similarity=0.241 Sum_probs=54.4
Q ss_pred CCeEEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCC---ChHHHHHHH
Q 015981 181 GAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLG---LPEEVLQGV 257 (397)
Q Consensus 181 ~~lf~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g---~P~~il~~v 257 (397)
..++++|-|- +.+.-...++.+.+-|+..+-|.- . + +.-.+.|+.+.+.+|. .+.|+| ++.+.-.++
T Consensus 13 ~~vi~Vir~~-~~~~a~~~a~al~~gGi~~iEvt~-~---t-~~a~~~I~~l~~~~p~----~~IGAGTVlt~~~a~~ai 82 (217)
T 3lab_A 13 KPLIPVIVID-DLVHAIPMAKALVAGGVHLLEVTL-R---T-EAGLAAISAIKKAVPE----AIVGAGTVCTADDFQKAI 82 (217)
T ss_dssp CSEEEEECCS-CGGGHHHHHHHHHHTTCCEEEEET-T---S-TTHHHHHHHHHHHCTT----SEEEEECCCSHHHHHHHH
T ss_pred CCEEEEEEcC-CHHHHHHHHHHHHHcCCCEEEEeC-C---C-ccHHHHHHHHHHHCCC----CeEeeccccCHHHHHHHH
Confidence 3599999874 555555667788888888777742 1 1 2234666777777763 466777 599999999
Q ss_pred HcCCcEEecc
Q 015981 258 AAGVDLFDSA 267 (397)
Q Consensus 258 ~~GvD~FD~~ 267 (397)
..|.|.+-|+
T Consensus 83 ~AGA~fivsP 92 (217)
T 3lab_A 83 DAGAQFIVSP 92 (217)
T ss_dssp HHTCSEEEES
T ss_pred HcCCCEEEeC
Confidence 9999999776
No 220
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=21.13 E-value=2.5e+02 Score=25.86 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=49.5
Q ss_pred HHHHHHhcCCceEEEcCccC--CC----chhhH---HHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchh
Q 015981 199 CAQEVAVRNVSGYWIGGFGL--GE----SMEER---PSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYI 269 (397)
Q Consensus 199 sa~~l~~~~~~G~~IgGl~~--ge----~~~~~---~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p 269 (397)
-++++.+.|.+-+=|||-+. |. ..+|. ..+|+.+.+.. +.|.- .-..+|.-+-.|++.|+|++-++..
T Consensus 43 ~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~--~~piS-IDT~~~~va~aAl~aGa~iINdvsg 119 (282)
T 1aj0_A 43 HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF--EVWIS-VDTSKPEVIRESAKVGAHIINDIRS 119 (282)
T ss_dssp HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC--CCEEE-EECCCHHHHHHHHHTTCCEEEETTT
T ss_pred HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc--CCeEE-EeCCCHHHHHHHHHcCCCEEEECCC
Confidence 34566667888999998664 21 12344 33444444332 44532 3567899999999999999976542
Q ss_pred -------HHhhhcceeecc
Q 015981 270 -------YHLTIGGFALTF 281 (397)
Q Consensus 270 -------~~~a~~G~al~f 281 (397)
...++.|..++.
T Consensus 120 ~~d~~~~~~~a~~~~~vVl 138 (282)
T 1aj0_A 120 LSEPGALEAAAETGLPVCL 138 (282)
T ss_dssp TCSTTHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHhCCeEEE
Confidence 224566666554
No 221
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=20.98 E-value=1e+02 Score=28.28 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=32.4
Q ss_pred HHHHHcCCCCCCccc-ccCCCChHHHHHHHHcCCcEEecch
Q 015981 229 LNAVTDNLPKDWPRM-ICGLGLPEEVLQGVAAGVDLFDSAY 268 (397)
Q Consensus 229 v~~~~~~Lp~~kpr~-l~G~g~P~~il~~v~~GvD~FD~~~ 268 (397)
.....+.+|.+.+.. -.|+.+|.++..+...|+|-|=.--
T Consensus 194 t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGe 234 (258)
T 4a29_A 194 QRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISS 234 (258)
T ss_dssp HHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECH
T ss_pred HHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECH
Confidence 344567899888765 3699999999999999999887653
No 222
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=20.92 E-value=1.1e+02 Score=29.25 Aligned_cols=118 Identities=14% Similarity=0.174 Sum_probs=61.4
Q ss_pred hhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE-EeecCCCCHHHHHHHHHHHHhcC
Q 015981 129 VEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVF-GSIVGGSNIEERKRCAQEVAVRN 207 (397)
Q Consensus 129 e~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf-~~iqGg~~~~lR~~sa~~l~~~~ 207 (397)
.+.++.....|+|++.. |..... + + .+...++++++.. ...++ +.+. .. +-++.+.+.+
T Consensus 107 ~e~a~~l~eaGad~I~l--d~a~G~-~-~----~~~~~i~~i~~~~-----~~~Vivg~v~---t~----e~A~~l~~aG 166 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVL--DSAHGH-S-L----NIIRTLKEIKSKM-----NIDVIVGNVV---TE----EATKELIENG 166 (361)
T ss_dssp HHHHHHHHHTTCSEEEE--CCSCCS-B-H----HHHHHHHHHHHHC-----CCEEEEEEEC---SH----HHHHHHHHTT
T ss_pred HHHHHHHHHcCcCeEEE--eCCCCC-c-H----HHHHHHHHHHHhc-----CCcEEEccCC---CH----HHHHHHHHcC
Confidence 67777777889997753 211111 1 1 1222344444321 11233 2332 22 2356677889
Q ss_pred CceEEEcCccCC-Cc--------hhhHHHHHHHHHcCCCC-CCccccc-CCCChHHHHHHHHcCCcEEecc
Q 015981 208 VSGYWIGGFGLG-ES--------MEERPSLLNAVTDNLPK-DWPRMIC-GLGLPEEVLQGVAAGVDLFDSA 267 (397)
Q Consensus 208 ~~G~~IgGl~~g-e~--------~~~~~~~v~~~~~~Lp~-~kpr~l~-G~g~P~~il~~v~~GvD~FD~~ 267 (397)
++++.+|+-..+ .. ..+ ...+..+.+..+. +.|...- |+.+|.+|..++++|+|.+=..
T Consensus 167 aD~I~VG~~~Gs~~~tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 167 ADGIKVGIGPGSICTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp CSEEEECSSCCTTCCHHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred cCEEEEecCCCcCCCcccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 999988532111 00 011 2233333221111 3565543 8899999999999999976544
No 223
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=20.90 E-value=1.6e+02 Score=30.10 Aligned_cols=77 Identities=17% Similarity=0.214 Sum_probs=55.4
Q ss_pred EEeecCCCCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcE
Q 015981 184 FGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDL 263 (397)
Q Consensus 184 f~~iqGg~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~ 263 (397)
.|.-.| ...+-.++ ++.|.+.+++-++|..-+ |.+ +...+.++++.+..| +.+...=++.+++....++..|+|.
T Consensus 272 VgAAVg-v~~d~~eR-~~aLv~AGvD~iviD~ah-Ghs-~~v~~~i~~ik~~~p-~~~viaGNVaT~e~a~~Li~aGAD~ 346 (556)
T 4af0_A 272 CGAAIG-TRPGDKDR-LKLLAEAGLDVVVLDSSQ-GNS-VYQIEFIKWIKQTYP-KIDVIAGNVVTREQAAQLIAAGADG 346 (556)
T ss_dssp CEEEEC-SSHHHHHH-HHHHHHTTCCEEEECCSC-CCS-HHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHHTCSE
T ss_pred eEEEec-cCccHHHH-HHHHHhcCCcEEEEeccc-ccc-HHHHHHHHHHHhhCC-cceEEeccccCHHHHHHHHHcCCCE
Confidence 333333 34443333 456778899999998643 554 345678888888876 5777677899999999999999999
Q ss_pred Ee
Q 015981 264 FD 265 (397)
Q Consensus 264 FD 265 (397)
+-
T Consensus 347 vk 348 (556)
T 4af0_A 347 LR 348 (556)
T ss_dssp EE
T ss_pred Ee
Confidence 85
No 224
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=20.73 E-value=77 Score=29.01 Aligned_cols=44 Identities=11% Similarity=0.026 Sum_probs=35.2
Q ss_pred HHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 227 SLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 227 ~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
++|+.+.+ ..++.++.++-+|.++-.++.+|||.+-+.+|.++.
T Consensus 232 ~~v~~~~~---~G~~v~~wTvn~~~~~~~l~~~GVdgIiTD~P~~~~ 275 (287)
T 2oog_A 232 QNTHHLKD---LGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYK 275 (287)
T ss_dssp HHHHHHHH---TTCEECCBCCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred HHHHHHHH---CCCeEEEEeCCCHHHHHHHHHcCCCEEEeCCHHHHH
Confidence 34444443 357788889999999999999999999999998654
No 225
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=20.51 E-value=80 Score=28.26 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=35.6
Q ss_pred HHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 227 SLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 227 ~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
++++.+.+ ..++.++.++-+|.++-.++.+|||.+-+.+|....
T Consensus 202 ~~v~~~~~---~G~~v~~wTvn~~~~~~~l~~~GvdgIiTD~P~~~~ 245 (252)
T 2pz0_A 202 ELVEGCKK---NGVKLFPWTVDRKEDMERMIKAGVDGIITDDPETLI 245 (252)
T ss_dssp HHHHHHHH---TTCEECCBCCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred HHHHHHHH---CCCEEEEECCCCHHHHHHHHHcCCCEEEcCCHHHHH
Confidence 45554443 367788889999999999999999999999998654
No 226
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=20.49 E-value=1.3e+02 Score=28.14 Aligned_cols=62 Identities=13% Similarity=0.067 Sum_probs=43.0
Q ss_pred HhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEecchhHHhh
Q 015981 204 AVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLT 273 (397)
Q Consensus 204 ~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~~~p~~~a 273 (397)
.+.+.+++.++-+ +++++.+.++.+. ..-+.-..|=-++..|....+.|||.|-....+..+
T Consensus 215 l~aGaD~I~LDn~----~~~~l~~av~~~~----~~v~ieaSGGIt~~~i~~~a~tGVD~IsvGalt~sa 276 (287)
T 3tqv_A 215 IAAKADIVMLDNF----SGEDIDIAVSIAR----GKVALEVSGNIDRNSIVAIAKTGVDFISVGAITKHI 276 (287)
T ss_dssp HHTTCSEEEEESC----CHHHHHHHHHHHT----TTCEEEEESSCCTTTHHHHHTTTCSEEECSHHHHSB
T ss_pred HHcCCCEEEEcCC----CHHHHHHHHHhhc----CCceEEEECCCCHHHHHHHHHcCCCEEEEChhhcCC
Confidence 3467888887653 3455666665443 233344567679999999999999999998776543
No 227
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=20.25 E-value=1.3e+02 Score=28.29 Aligned_cols=128 Identities=13% Similarity=0.066 Sum_probs=68.1
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeecCCCCH---H----H---H
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNI---E----E---R 196 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~~lf~~iqGg~~~---~----l---R 196 (397)
+.+..++..+ .|.+-+|. |.-.. + .+.-+++|.+..+.|-...-.-..=+|.|.|..+. + + -
T Consensus 84 ~~e~~~~ai~-~GFtSVMi--DgS~~--p---~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~P 155 (305)
T 1rvg_A 84 SYESVLRALR-AGFTSVMI--DKSHE--D---FETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNP 155 (305)
T ss_dssp SHHHHHHHHH-TTCSEEEE--CCTTS--C---HHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCH
T ss_pred CHHHHHHHHH-cCCCeeee--CCCCC--C---HHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCH
Confidence 4566666554 46666665 32211 1 45556666666665543210001135555442221 0 0 2
Q ss_pred HHHHHHHHhcCCceEEEc--CccC--C--CchhhHHHHHHHHHcCCCCCCcccccCCCC-hHHHHHHH-HcCCcEE
Q 015981 197 KRCAQEVAVRNVSGYWIG--GFGL--G--ESMEERPSLLNAVTDNLPKDWPRMICGLGL-PEEVLQGV-AAGVDLF 264 (397)
Q Consensus 197 ~~sa~~l~~~~~~G~~Ig--Gl~~--g--e~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~-P~~il~~v-~~GvD~F 264 (397)
.++.+++.+.+++-+++. -.+. . ..+.-..++|+.+.+.+| -|..++|-.+ |++++..+ +.|-|+=
T Consensus 156 eea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~--vpLVlHGgSsv~~~~~~~~~~~gg~~~ 229 (305)
T 1rvg_A 156 EEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP--APLVLHGASAVPPELVERFRASGGEIG 229 (305)
T ss_dssp HHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC--SCEEECSCCCCCHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC--CCEEEeCCCCCcHHHHHHHHhhccccc
Confidence 345666666788877764 2221 1 122334678888888887 8988998763 66666555 3555553
No 228
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=20.19 E-value=4.9e+02 Score=23.57 Aligned_cols=124 Identities=9% Similarity=-0.043 Sum_probs=64.0
Q ss_pred ChhhHHHHHHhcCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCC-CeEEeec-CCCC-HHH--------
Q 015981 127 KPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGG-AVFGSIV-GGSN-IEE-------- 195 (397)
Q Consensus 127 tpe~~~~~q~~i~pDi~~~L~d~~~~~~~~kr~~~sverT~~w~~~~l~~~~~~~-~lf~~iq-Gg~~-~~l-------- 195 (397)
|.+.+++....+|+|++.... ..+.+-++.+++...++. . ..... .++++.+ -..+ .++
T Consensus 71 Tv~~a~~~~~~~gad~vTVh~-----~~G~~~~~aa~~~~~~~~----~-~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~ 140 (259)
T 3tfx_A 71 TVYNGAKALAKLGITFTTVHA-----LGGSQMIKSAKDGLIAGT----P-AGHSVPKLLAVTELTSISDDVLRNEQNCRL 140 (259)
T ss_dssp HHHHHHHHHHTTTCSEEEEEG-----GGCHHHHHHHHHHHHHHS----C-TTSCCCEEEEECSCTTCCHHHHHHTSCBSS
T ss_pred HHHHHHHHHHhcCCCEEEEcC-----CCCHHHHHHHHHHHHHhc----c-cCCCCceEEEEEEeCCCCHHHHHHHhCCCC
Confidence 556777888889999987752 234433333333222110 0 01112 2666633 1221 122
Q ss_pred -----HHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChH----------HHHHHHHcC
Q 015981 196 -----RKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPE----------EVLQGVAAG 260 (397)
Q Consensus 196 -----R~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~----------~il~~v~~G 260 (397)
-.+-++...+.+++|++-+ +++ .+.|+. .++.+.....+|++--- .+-.++..|
T Consensus 141 ~~~e~v~~~A~~a~~~G~dGvV~s-------~~e-~~~ir~---~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aG 209 (259)
T 3tfx_A 141 PMAEQVLSLAKMAKHSGADGVICS-------PLE-VKKLHE---NIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWG 209 (259)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEECC-------GGG-HHHHHH---HHCSSSEEEECCCCCC-----------CHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEC-------HHH-HHHHHh---hcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcC
Confidence 2223333345688888653 222 233343 33444444467886321 267788999
Q ss_pred CcEEecchhHH
Q 015981 261 VDLFDSAYIYH 271 (397)
Q Consensus 261 vD~FD~~~p~~ 271 (397)
.|+|-.-.|..
T Consensus 210 ad~iVvGr~I~ 220 (259)
T 3tfx_A 210 SSAIVVGRPIT 220 (259)
T ss_dssp CSEEEECHHHH
T ss_pred CCEEEEChHHh
Confidence 99998776653
No 229
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=20.15 E-value=2.2e+02 Score=27.33 Aligned_cols=72 Identities=8% Similarity=-0.100 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHhcCCceEEEcCccCCCchhhHHHHHHHHHcCCCCCCcccccCCCChHHHHHHHHcCCcEEec
Q 015981 191 SNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDS 266 (397)
Q Consensus 191 ~~~~lR~~sa~~l~~~~~~G~~IgGl~~ge~~~~~~~~v~~~~~~Lp~~kpr~l~G~g~P~~il~~v~~GvD~FD~ 266 (397)
...+...+-++.|.+.|++-+-+|+-. ..++..+.++.+.+..+. .+...+.-+.+.+|-.+++.|+|.+..
T Consensus 22 ~~~~~k~~ia~~L~~~Gv~~IE~g~p~---~~~~~~~~~~~i~~~~~~-~~v~~~~r~~~~di~~a~~~g~~~v~i 93 (382)
T 2ztj_A 22 FSTQDKVEIAKALDEFGIEYIEVTTPV---ASPQSRKDAEVLASLGLK-AKVVTHIQCRLDAAKVAVETGVQGIDL 93 (382)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCTT---SCHHHHHHHHHHHTSCCS-SEEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEcCCc---CCHHHHHHHHHHHhcCCC-cEEEEEcccChhhHHHHHHcCCCEEEE
Confidence 456777788899999999988886422 223445666666654332 222234556799999999999995543
No 230
>1ma1_A Superoxide dismutase; metal specificity, azide inhibition, peroxide inactivation, oxidoreductase; 2.60A {Methanothermobacterthermautotrophicus} SCOP: a.2.11.1 d.44.1.1
Probab=20.04 E-value=1.5e+02 Score=26.10 Aligned_cols=56 Identities=25% Similarity=0.417 Sum_probs=36.2
Q ss_pred cccHHHHHHHhhcChhhHhH-------------------HHHHHHHHHHHHHH-----------HHHHHHHHc--CCHHH
Q 015981 330 NHTKAYINHLLNVHEMLAQI-------------------LLEIHNTHHYLGFF-----------RSIREAIKE--GCFEQ 377 (397)
Q Consensus 330 ~~traYlhHLl~~~Eml~~~-------------------LL~~HNl~~~~~~~-----------~~iR~aI~~--g~l~~ 377 (397)
+|..+|+.-|=++-|-+... .-..+|.++|-+-| .++.++|.+ |+|++
T Consensus 36 kHh~~YV~nLN~~~~~~~~~~~~~~~~~~~~~~~~i~nn~gg~~NH~~fw~~L~p~~~~g~~P~g~L~~aI~~~FGS~d~ 115 (205)
T 1ma1_A 36 KHHQAYVDGANALLRKLDEARESDTDVDIKAALKELSFHVGGYVLHLFFWGNMGPADECGGEPSGKLAEYIEKDFGSFER 115 (205)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTBCCTTTSCSCCCHHHHHHHHHHHSSHHH
T ss_pred HHHHHHHHHHHHHHHHhHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhCCHHH
Confidence 58889988874443322211 11355666664444 368888875 89999
Q ss_pred HHHHHHHH
Q 015981 378 FQKKFVQS 385 (397)
Q Consensus 378 ~~~~f~~~ 385 (397)
|+++|.+.
T Consensus 116 fk~~F~~a 123 (205)
T 1ma1_A 116 FRKEFSQA 123 (205)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999865
Done!