Your job contains 1 sequence.
>015988
MDRATDNLSTASSSSDTNPDTPRACSPSSSSSFSSSSSSASSAVHRALHLIQSDDPDLKL
EAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRAPDSDHESALLALLNLAVKDEKNKIKIV
EAGALEPIISFLQSPDLNLQEYAAAALLTLSASSVNKPFISASGAIPLLVEILRYGSQQA
KFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGFDEG
RIVLTSEEGGVLAVVEVLENGSLQAREHAVGALLMMCQSDRCKYREPILREGVIPGLLEL
TIQGTPKSQTKARTLLQLLRDSPYPRSELQPDTLENIVCNIISQIDGDEQSGKAKKMLAE
MVQVSMEQSLRHLQQRALVCTPADLPIASVTSEVSSK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015988
(397 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 1059 4.4e-107 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 623 7.1e-61 1
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 375 1.3e-34 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 298 2.5e-25 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 287 2.9e-25 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 287 6.7e-25 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 267 3.8e-23 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 276 4.8e-23 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 270 8.2e-23 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 268 9.5e-23 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 266 5.0e-22 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 263 1.1e-21 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 254 8.5e-20 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 249 4.5e-19 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 248 9.3e-19 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 244 2.1e-18 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 238 1.2e-17 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 232 1.0e-16 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 232 1.1e-16 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 229 1.8e-16 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 227 3.5e-16 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 218 3.5e-15 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 211 2.9e-14 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 189 6.7e-12 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 189 6.7e-12 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 181 5.3e-11 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 180 6.5e-11 1
TAIR|locus:2150295 - symbol:ARIA "ARM repeat protein inte... 181 7.4e-11 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 178 1.2e-10 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 176 1.8e-10 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 170 1.2e-09 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 164 1.8e-09 1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 165 3.1e-09 1
TAIR|locus:2038598 - symbol:AT2G27430 "AT2G27430" species... 157 1.6e-08 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 156 4.5e-08 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 150 2.7e-07 2
ZFIN|ZDB-GENE-040718-22 - symbol:kpna2 "karyopherin alpha... 146 4.1e-07 1
TAIR|locus:2195351 - symbol:IMPA-4 "AT1G09270" species:37... 141 1.4e-06 1
UNIPROTKB|F1NJS6 - symbol:KPNA2 "Importin subunit alpha" ... 139 2.3e-06 1
TAIR|locus:2155929 - symbol:IMPA-5 "importin alpha isofor... 139 2.5e-06 2
TAIR|locus:2179842 - symbol:ABAP1 "ARMADILLO BTB protein ... 139 3.8e-06 1
DICTYBASE|DDB_G0272318 - symbol:DDB_G0272318 "putative im... 134 8.1e-06 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 99 8.5e-06 2
ZFIN|ZDB-GENE-030616-533 - symbol:ankar "ankyrin and arma... 137 1.4e-05 1
TAIR|locus:2055033 - symbol:ARABIDILLO-1 "AT2G44900" spec... 134 1.8e-05 1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 123 6.1e-05 1
TAIR|locus:2204700 - symbol:AT1G77460 "AT1G77460" species... 113 9.1e-05 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 122 0.00025 1
UNIPROTKB|E1C8F9 - symbol:E1C8F9 "Uncharacterized protein... 123 0.00027 1
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 123 0.00029 1
TAIR|locus:2132238 - symbol:MOS6 "MODIFIER OF SNC1, 6" sp... 122 0.00034 2
UNIPROTKB|J9P954 - symbol:J9P954 "Importin subunit alpha"... 118 0.00050 1
POMBASE|SPBC1604.08c - symbol:imp1 "importin alpha" speci... 118 0.00051 1
FB|FBgn0024889 - symbol:Kap-alpha1 "karyopherin alpha1" s... 118 0.00052 1
ZFIN|ZDB-GENE-040426-2023 - symbol:kpna7 "karyopherin alp... 116 0.00080 1
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 222/338 (65%), Positives = 262/338 (77%)
Query: 43 AVHRALHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLR--APDSDHES 100
++ R L LI+S+D D +L AA+EIRRLTKTS RCRR +QAV+PLV MLR +P+S HE+
Sbjct: 65 SIQRVLSLIRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVEPLVSMLRFDSPESHHEA 124
Query: 101 ALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFI 160
ALLALLNLAVKDEKNK+ I+EAGALEPII+FLQS LQEY NKP I
Sbjct: 125 ALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPII 184
Query: 161 SASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKS 220
A+G +PLLV+++++GS QAK DAVMALSNLST PDNLS+IL T P+ I++LL KKS
Sbjct: 185 GANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKS 244
Query: 221 SKTAEKCTSLIESL-VGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQS 279
SKT+EKC SLIE+L V +E R L S NGSLQAREHAVG LL +CQS
Sbjct: 245 SKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQS 304
Query: 280 DRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPYPRSELQPDTLENIVC 339
DR KYREPILREGVIPGLLELT+QGT KS+ KA+ LL LLR+S PRSE+QPDT+ENIV
Sbjct: 305 DRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPRSEVQPDTIENIVS 364
Query: 340 NIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRA 377
++IS IDGD+QSGKAKKMLAEMVQVSME+SLRHLQ+RA
Sbjct: 365 SLISHIDGDDQSGKAKKMLAEMVQVSMEKSLRHLQERA 402
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 153/357 (42%), Positives = 217/357 (60%)
Query: 44 VHRALHLIQSDDPDLKLEAAREIRRLTKTS---QRCRRQLAQA--VQPLVLMLRAPDSD- 97
+H + L+ D D ++EAA+EIR+L + S R +LA A + PLV ML + + D
Sbjct: 48 LHLSKKLLHGD-LDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSNVDA 106
Query: 98 HESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNK 157
++LLALLNLAV++E+NKI+IV+AGA+ P+I L+ + +L+E NK
Sbjct: 107 RHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANK 166
Query: 158 PFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFC 217
I +SG PLL+++L G+ Q K DAV AL NLS + + IL + ++ LL C
Sbjct: 167 AMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKEC 226
Query: 218 KKSSKTAEKCTSLIESLVGFDE-GRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMM 276
KK SK AEK T+L+E ++ E GR +TS +GS + EHAVGALL +
Sbjct: 227 KKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSL 286
Query: 277 CQSDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPYPRSELQPDTLEN 336
C+SDR KYR+ IL+EG IPGLL T+ GT KS+ +AR LL LLR++P + E+ P TLE
Sbjct: 287 CRSDRDKYRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLDLLRETPREK-EMTPLTLEK 345
Query: 337 IVCNIISQIDGDEQSGK-AKKMLAEMVQVSMEQSLRHLQQRALVCTPADLPIASVTS 392
IV I Q+DG E++ + AKK+L +MV SME S++ +Q +A C A +P S S
Sbjct: 346 IVYGIAVQVDGAEKAAETAKKLLQDMVHRSMELSMKSIQHKAASC--ASIPDISSKS 400
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 107/319 (33%), Positives = 177/319 (55%)
Query: 53 SDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDS-DHESALLALLNLA 109
S + + ++EAA E LT S++ R++LA+ + PL+ ML++ D E AL ALL+LA
Sbjct: 11 SGNRESQIEAAIE---LTNLSRKQRQKLAEREIISPLLSMLQSQDCITTEVALSALLSLA 67
Query: 110 VKDEKNKIKIVEAGALEPIISFLQSPD-LNLQEYXXXXXXXXXXXXVNKPFISASGAIPL 168
E+NK++IV++GA+ ++ LQS + + E NK ++++ + L
Sbjct: 68 FGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMASTRLVQL 127
Query: 169 LVEILRYG--SQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEK 226
LV ++ + QAK D + L NLST + +++ + +++ ++ FC KSS+ A+K
Sbjct: 128 LVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDKSSELADK 187
Query: 227 CTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYRE 286
+L+E+++ + +S GS Q +EHAVG LL +C +DR R
Sbjct: 188 AVALLENIISHSPESV--SSIGGAIGVLVEAIEEGSAQCKEHAVGILLGICNNDRETNRG 245
Query: 287 PILREGVIPGLLELTIQGTPKSQTKARTLLQLLRD-SPYPRSELQPDTLENIVCNIISQI 345
ILREGV+PGLL++++ GT +++ AR LL LLRD S Y Q +E IV I+ +I
Sbjct: 246 MILREGVMPGLLQVSVDGTRRAKEMARELLLLLRDCSGYVIKNKQ-SKIE-IVEQIMREI 303
Query: 346 D--GDEQSGKAKKMLAEMV 362
D G+ G K++ EM+
Sbjct: 304 DQEGERIPGTMLKLVEEMI 322
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 298 (110.0 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 84/281 (29%), Positives = 145/281 (51%)
Query: 44 VHRALHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDS-DHES 100
V + + ++S D + +A E+R L K + R + A+ LV +L + DS E+
Sbjct: 546 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQEN 605
Query: 101 ALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFI 160
A+ ALLNL++ D NK I +AGA+EP+I L++ +E NK I
Sbjct: 606 AVTALLNLSINDN-NKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKI 664
Query: 161 SASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKS 220
SGAI LV++L G+ + K DA AL NLS H +N ++I+ + + ++DL+ +
Sbjct: 665 GQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM---DPA 721
Query: 221 SKTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSD 280
+ +K +++ +L EGR + GS + +E+A ALL + ++
Sbjct: 722 AGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVEL-GSARGKENAAAALLQL-STN 779
Query: 281 RCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRD 321
++ +L+EG +P L+ L+ GTP+++ KA+ LL R+
Sbjct: 780 SGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRN 820
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 92/326 (28%), Positives = 153/326 (46%)
Query: 6 DNLSTASSSSDTNPDTPRACXXXXXXXXXXXXXXXXXAV-HRALHLIQSDDPDLKLEAAR 64
D+ + + +SD + + P A + H HL S D + +AA
Sbjct: 26 DSSAFSDCNSDRSGEFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAM 85
Query: 65 EIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDSD-HESALLALLNLAVKDEKNKIKIVE 121
EIR L+K R ++A+A ++PL+ ++ + D E + A+LNL++ DE NK I
Sbjct: 86 EIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDE-NKESIAS 144
Query: 122 AGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYGSQQAK 181
+GA++P++ L+ +E NK I SGAIPLLV +L G +AK
Sbjct: 145 SGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAK 204
Query: 182 FDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGFDEGR 241
DA AL +L + +N + + + +V+L+ S +K ++ L+ E +
Sbjct: 205 KDASTALYSLCSAKENKIRAVQSGIMKPLVELM--ADFGSNMVDKSAFVMSLLMSVPESK 262
Query: 242 IVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILREGVIPGLLELT 301
+ G+ + +E AV LL +C+ + YR + REG IP L+ L+
Sbjct: 263 PAIVEEGGVPVLVEIVEV-GTQRQKEMAVSILLQLCE-ESVVYRTMVAREGAIPPLVALS 320
Query: 302 IQGTPKSQTKARTLLQLLRDSPYPRS 327
GT +++ KA L++LLR PRS
Sbjct: 321 QAGTSRAKQKAEALIELLRQ---PRS 343
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 287 (106.1 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 96/340 (28%), Positives = 168/340 (49%)
Query: 52 QSDDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDSDHESALLA----L 105
+++ + K+ AA E+R L K R LA A+ PLV M+ +S E AL+A L
Sbjct: 119 EAEAAEKKIAAASEVRLLAKDDIEARVTLAMLGAIPPLVSMID-DESQSEDALIASLYAL 177
Query: 106 LNLAVKDEKNKIKIVEAGALEPIISFLQS---PDLNLQEYXXXXXXXXXXXXVNKPFISA 162
LNL + ++ NK IV+AG + ++ ++S P+ + E NKP I +
Sbjct: 178 LNLGIGNDVNKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGS 237
Query: 163 SGAIPLLVEILRY----GSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCK 218
SGAI LV+ L+ S QA+ DA+ AL NLS + N+S IL T+ IP +++ L
Sbjct: 238 SGAIIFLVKTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTL---- 293
Query: 219 KSSKTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXX-NGSLQAREHAVGALLMMC 277
+ +E+ +++ ++V EGR + N S++ +E AV L++M
Sbjct: 294 GDMEVSERILAILTNVVSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMA 353
Query: 278 QSDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPYPRSELQPDTLENI 337
R ++ G+ LLELT+ G+P +Q +A +L+ LR + P +
Sbjct: 354 HKGYGD-RNAMIEAGIESSLLELTLVGSPLAQKRASRVLECLRVVDKGKQVSAP--IYG- 409
Query: 338 VCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRA 377
++ + D + +K + ++VQ S++ +++ + +RA
Sbjct: 410 TSSLGRERGHDLRMTDERKAVKQLVQQSLQSNMKRIVKRA 449
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 87/287 (30%), Positives = 146/287 (50%)
Query: 49 HLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDSD-HESALLAL 105
HL S + + +AA EIR L+K R +LA+A ++PLV ++ + D E + A+
Sbjct: 68 HLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAV 127
Query: 106 LNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGA 165
LNL++ DE NK IV +GA++P+++ L+ +E NK I SGA
Sbjct: 128 LNLSLCDE-NKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGA 186
Query: 166 IPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAE 225
IPLLV +L G +AK DA AL +L + +N + + + + +V+L+I + S +
Sbjct: 187 IPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFE--SDMVD 244
Query: 226 KCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYR 285
K ++ L+ E + + G+ + +E +V LL +C+ + YR
Sbjct: 245 KSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEA-GTQRQKEISVSILLQLCE-ESVVYR 302
Query: 286 EPILREGVIPGLLELTIQGTPK--SQTKARTLLQLLRDSPYPRSELQ 330
+ REG +P L+ L+ QG+ ++ KA L++LLR PR + Q
Sbjct: 303 TMVAREGAVPPLVALS-QGSASRGAKVKAEALIELLRQ---PRQQQQ 345
Score = 202 (76.2 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 79/298 (26%), Positives = 133/298 (44%)
Query: 84 VQPLVLMLRAPDSDHESALLAL-LNLAVKDE-KNKIKIVEAGALEPIISFLQSPDLNLQE 141
++ L+ L + S E A+ + L K++ +N+IK+ +AGA++P++S + S DL LQE
Sbjct: 62 IRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQE 121
Query: 142 YXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSII 201
Y NK I +SGA+ LV LR G+ K +A AL LS +N I
Sbjct: 122 YGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITI 181
Query: 202 LGTNPIPSIVDLLIFCKKSSKTAEK-CTSLIESLVGFDEGRI-VLTSXXXXXXXXXXXXX 259
+ IP +V+LL + A+K ++ + SL +E + + S
Sbjct: 182 GRSGAIPLLVNLL---ENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDF 238
Query: 260 NGSLQAREHAVGALLMMCQSDRCKYREPILREGVIPGLLELTIQGTPKS-QTKARTLLQL 318
+ + V LLM + ++ EG +P L+E+ GT + + LLQL
Sbjct: 239 ESDMVDKSAFVMNLLMSAPESK----PAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQL 294
Query: 319 LRDSPYPRSELQPDTLENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQR 376
+S R+ + E V +++ G G K+ AE + + Q + QQ+
Sbjct: 295 CEESVVYRTMV---AREGAVPPLVALSQGSASRGA--KVKAEALIELLRQPRQQQQQQ 347
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 276 (102.2 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 86/275 (31%), Positives = 135/275 (49%)
Query: 51 IQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDS-DHESALLALLN 107
++S +K AA EIR LT S R + + A+ PL+ +L + + E A+ ALLN
Sbjct: 481 LKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLN 540
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGA-I 166
L++ E NK IVE GA+EP++ L + + +E VN+ I S A I
Sbjct: 541 LSIS-ELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAI 599
Query: 167 PLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEK 226
LV +L G+ + K DA AL NLS DN + I+ + +V+LL + +K
Sbjct: 600 QALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL---DPDLEMVDK 656
Query: 227 CTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYRE 286
+L+ +L EGR + GS + +E+A LL +C + K+
Sbjct: 657 AVALLANLSAVGEGRQAIVREGGIPLLVETVDL-GSQRGKENAASVLLQLCLNSP-KFCT 714
Query: 287 PILREGVIPGLLELTIQGTPKSQTKARTLLQLLRD 321
+L+EG IP L+ L+ GT +++ KA+ LL R+
Sbjct: 715 LVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRN 749
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 75/279 (26%), Positives = 131/279 (46%)
Query: 87 LVLMLRAPDSDHESALLA-LLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXX 145
LV L++ + ++A A + +L + +N++ I GA+ P++S L S + QE+
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 146 XXXXXXXXXVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTN 205
+NK I GAI LV +L G+ +AK ++ +L +LS N I +N
Sbjct: 537 ALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSN 596
Query: 206 P-IPSIVDLLIFCKKSSKTAEKCTSLIESL-VGFD-EGRIVLTSXXXXXXXXXXXXXNGS 262
I ++V+LL K + + + S + +L + D + RIV +
Sbjct: 597 AAIQALVNLL--GKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL----DPD 650
Query: 263 LQAREHAVGALLMMCQSDRCKYREPILREGVIPGLLELTIQGTPKSQTKART-LLQLLRD 321
L+ + AV L + S + R+ I+REG IP L+E G+ + + A + LLQL +
Sbjct: 651 LEMVDKAVALLANL--SAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLN 708
Query: 322 SP-YPRSELQPDTLENIVCNIISQIDGDEQSGKAKKMLA 359
SP + LQ + +V +SQ KA+++L+
Sbjct: 709 SPKFCTLVLQEGAIPPLVA--LSQSGTQRAKEKAQQLLS 745
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 270 (100.1 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 100/341 (29%), Positives = 162/341 (47%)
Query: 59 KLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLML---RAPDSDHESALLALLNLAVKDE 113
K+ AA E+R L K R LA A+ PLV M+ R D+ S L ALLNL + ++
Sbjct: 160 KITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIAS-LYALLNLGIGND 218
Query: 114 KNKIKIVEAGALEPIISFLQSP---DLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLV 170
NK IV+AGA+ ++ ++SP D + E NKP I +SGAI LV
Sbjct: 219 ANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLV 278
Query: 171 EILRY----GSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEK 226
+ L+ S QA+ DA+ AL NLS + N+S IL T+ I +++ L + +E+
Sbjct: 279 KTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTL----GDMEVSER 334
Query: 227 CTSLIESLVGFDEGR--IVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKY 284
+++ +LV EGR I L + S +E A L++M
Sbjct: 335 ILAILSNLVAVPEGRKAIGLVCDAFPVLVDVLNWTD-SPGCQEKATYILMLMAHKGYGD- 392
Query: 285 REPILREGVIPGLLELTIQGTPKSQTKARTLLQLLR--------DSPYPRSELQPDTLEN 336
R+ ++ G+ LLELT+ G+ +Q +A +L+ LR DS L +
Sbjct: 393 RQVMIEAGIESALLELTLLGSALAQKRASRILECLRVDKGKQVLDSTGSCGALSAP-IYG 451
Query: 337 IVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRA 377
N + + D + +K + ++VQ S++ +++ + +RA
Sbjct: 452 TRDNGLDHEENDLMMSEERKAVKQLVQQSLQSNMKRIVKRA 492
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 268 (99.4 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 85/283 (30%), Positives = 138/283 (48%)
Query: 51 IQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDS-DHESALLALLN 107
++S +K AA ++R L K R + + A+Q L+ +LR D E A+ ALLN
Sbjct: 192 LRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLN 251
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIP 167
L++ D+ NK I GA++ ++ L++ ++ NK I A GAIP
Sbjct: 252 LSLHDQ-NKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIP 310
Query: 168 LLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKC 227
LV +L GS + K DA+ L L T N + + +VDL+ ++ + AEK
Sbjct: 311 PLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLV--AEEGTGMAEKA 368
Query: 228 TSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREP 287
++ SL D+G+ + +GS++ +E A+ LL +C SD + R
Sbjct: 369 MVVLSSLAAIDDGKEAIVEEGGIAALVEAIE-DGSVKGKEFAILTLLQLC-SDSVRNRGL 426
Query: 288 ILREGVIPGLLELTIQGTP--KSQTKARTLLQLLRDSPYPRSE 328
++REG IP L+ L+ G+ +++ KA LL LR+ PR E
Sbjct: 427 LVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLRE---PRKE 466
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 73/275 (26%), Positives = 119/275 (43%)
Query: 55 DPDLKLEAAREIRRLTKTSQRCRRQLA-QAVQPLVLM----LRAPDSDHESALLALLNLA 109
DP+L+ E + S ++ + +QP V + LR+ + + A L L
Sbjct: 151 DPELEREPCLGFLQRENFSTEIIECISPEDLQPTVKLCIDGLRSSSVAIKRSAAAKLRLL 210
Query: 110 VKDEK-NKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPL 168
K+ N++ I E+GA++ +I L+ D QE+ NK I+A GAI
Sbjct: 211 AKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKAVIAAGGAIKS 270
Query: 169 LVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCT 228
LV +L+ G++ +K +A AL +L+ +N I IP +V LL+ S + +
Sbjct: 271 LVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLL--NGSCRGKKDAL 328
Query: 229 SLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPI 288
+ + L + + + G+ A E A+ L + D K E I
Sbjct: 329 TTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMA-EKAMVVLSSLAAIDDGK--EAI 385
Query: 289 LREGVIPGLLELTIQGTPKSQTKA-RTLLQLLRDS 322
+ EG I L+E G+ K + A TLLQL DS
Sbjct: 386 VEEGGIAALVEAIEDGSVKGKEFAILTLLQLCSDS 420
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 266 (98.7 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 85/283 (30%), Positives = 139/283 (49%)
Query: 44 VHRALHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLA--QAVQPLVLMLRAPDSDHES- 100
V + + ++S D + EA IR L + S R +A +A+ LV +L + D ++
Sbjct: 423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQAD 482
Query: 101 ALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPF- 159
A+ LLNL++ D NK I E+GA+ P+I L++ L+E V + +
Sbjct: 483 AVTCLLNLSINDN-NKSLIAESGAIVPLIHVLKTG--YLEEAKANSAATLFSLSVIEEYK 539
Query: 160 --ISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFC 217
I +GAI LV++L GS K DA AL NLS H +N + ++ + +V+L+
Sbjct: 540 TEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM--- 596
Query: 218 KKSSKTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMC 277
+ EK ++ +L EG+I + GS + +E+A ALL +C
Sbjct: 597 DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVEL-GSARGKENATAALLQLC 655
Query: 278 QSDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLR 320
K+ ++REGVIP L+ LT GT + + KA+ LL+ +
Sbjct: 656 THSP-KFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFK 697
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 263 (97.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 85/266 (31%), Positives = 132/266 (49%)
Query: 62 AAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDS-DHESALLALLNLAVKDEKNKIK 118
AAREIR L KT + R +A+A + L +L + ++ E+++ A+LNL++ EKNK +
Sbjct: 426 AAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIY-EKNKSR 484
Query: 119 IVEAG-ALEPIISFLQSP-DLNLQEYXXXXXXXXXXXXVNKPFIS-ASGAIPLLVEILRY 175
I+E G LE I+S L S + QE K I+ + L +L+
Sbjct: 485 IMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQN 544
Query: 176 GSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLV 235
G+ + K DAV AL NLSTHPDN S ++ + S+V L K+ AE+ + LV
Sbjct: 545 GTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGAL----KNEGVAEEAAGALALLV 600
Query: 236 GFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILREGVIP 295
G + G+ + +E+AV ALL +C+S E +LR I
Sbjct: 601 RQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIA 660
Query: 296 GLLE-LTIQGTPKSQTKARTLLQLLR 320
GLL+ L GT +++ KA +L ++ +
Sbjct: 661 GLLQTLLFTGTKRARRKAASLARVFQ 686
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 254 (94.5 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 81/266 (30%), Positives = 129/266 (48%)
Query: 55 DPDLKLEAAREIRRLTKTSQRCRRQLAQA-VQPLVL-MLRAPDSD-HESALLALLNLAVK 111
+P+ + AA EIR L K + R +A+A PL++ +L PDS E ++ ALLNL++
Sbjct: 365 NPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSIC 424
Query: 112 DEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVE 171
E NK IV AGA+ I+ L+ + +E NK I A GAIP LV
Sbjct: 425 -ENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVV 483
Query: 172 ILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLI 231
+L G+Q+ K DA AL NL + N + IP++ LL + S ++ +++
Sbjct: 484 LLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLT--EPGSGMVDEALAIL 541
Query: 232 ESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILRE 291
L EG+ ++ S GS + RE+A L+ +C D ++ +
Sbjct: 542 AILSSHPEGKAIIGSSDAVPSLVEFIRT-GSPRNRENAAAVLVHLCSGDP-QHLVEAQKL 599
Query: 292 GVIPGLLELTIQGTPKSQTKARTLLQ 317
G++ L++L GT + + KA LL+
Sbjct: 600 GLMGPLIDLAGNGTDRGKRKAAQLLE 625
Score = 174 (66.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 66/275 (24%), Positives = 122/275 (44%)
Query: 97 DHESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVN 156
D SA + LA ++ N++ I EAGA+ ++ L +PD +QE+ N
Sbjct: 368 DQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENN 427
Query: 157 KPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIF 216
K I ++GAIP +V++L+ GS +A+ +A L +LS +N I IP +V LL
Sbjct: 428 KGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNE 487
Query: 217 CKKSSKTAEKCTSLIESLV--GFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALL 274
+ K + T+L + G ++G+ + +G + + A+ L
Sbjct: 488 GTQRGKK-DAATALFNLCIYQG-NKGKAIRAGVIPTLTRLLTEPGSGMV---DEALAILA 542
Query: 275 MMCQSDRCKYREPILREGVIPGLLELTIQGTPKS-QTKARTLLQLLRDSPYPRSELQPDT 333
++ S + + I +P L+E G+P++ + A L+ L P E Q
Sbjct: 543 IL--SSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLG 600
Query: 334 LENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQ 368
L + ++ D KA ++L + +++ +Q
Sbjct: 601 LMGPLIDLAGN-GTDRGKRKAAQLLERISRLAEQQ 634
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 249 (92.7 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 82/284 (28%), Positives = 135/284 (47%)
Query: 43 AVHRALHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA-VQPLVLMLRAPDSD---H 98
A+ + + S + + A EIR L+K S R +A+A P+++ L D D
Sbjct: 342 AIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQ 401
Query: 99 ESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKP 158
E+A+ +LNL++ E NK I+ AGA+ I+ L++ + +E NK
Sbjct: 402 ENAVTCILNLSIY-EHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKI 460
Query: 159 FISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCK 218
I ASGAI LV++L+YGS + K DA AL NL + N + + +V +L
Sbjct: 461 IIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTD-S 519
Query: 219 KSSKTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQ 278
S + A++ +++ L + + + + RE+A LL +C+
Sbjct: 520 SSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQP-RNRENAAAILLCLCK 578
Query: 279 SDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDS 322
D K I R G + L+EL+ GT +++ KA +LL+LLR S
Sbjct: 579 RDTEKLIS-IGRLGAVVPLMELSRDGTERAKRKANSLLELLRKS 621
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 248 (92.4 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 82/290 (28%), Positives = 137/290 (47%)
Query: 50 LIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDSDH-----ESAL 102
L + + + K + +IR L K + R + V+ L+ L + D+ +S
Sbjct: 432 LNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGA 491
Query: 103 LALLNLAVKDEKNKIKIVEAGA---LEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPF 159
+AL NLAV + +NK ++ +G LE +IS +S Y K
Sbjct: 492 MALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEA-----KSV 546
Query: 160 ISASGAIPLLVEILRYGSQ-QAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCK 218
I +S A+P LV++L+ + Q K DA+ AL NLST+ N+ +L +N I S+ LL
Sbjct: 547 IGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTG 606
Query: 219 KSSKTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQ 278
++ EK +++ +L EG+ S G +E AV LL++C
Sbjct: 607 ENL-WIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCN 665
Query: 279 SDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPYPRSE 328
R + +L+EGVIP L+ +++ GTP+ + K++ LL L R+ R +
Sbjct: 666 G-RESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQ 714
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 244 (91.0 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 79/278 (28%), Positives = 136/278 (48%)
Query: 48 LHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDS-DHESALLA 104
++ ++S + D + AA EIR L K + R +A+A + LV +L + D E A+ A
Sbjct: 329 MNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTA 388
Query: 105 LLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASG 164
LLNL++ E NK IV++ A+ I+ L++ + +E NK I A+G
Sbjct: 389 LLNLSIH-ENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAG 447
Query: 165 AIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTA 224
AIP L+ +L GS + K DA A+ NL + N + + +++ L+ +
Sbjct: 448 AIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLV--DPTGGMI 505
Query: 225 EKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKY 284
++ SL+ L G EG+IV+ + GS + RE+A L ++C +D +
Sbjct: 506 DEALSLLSILAGNPEGKIVI-ARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADT-EQ 563
Query: 285 REPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDS 322
GV L EL+ GT +++ KA ++L+L+ +
Sbjct: 564 TLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQA 601
Score = 183 (69.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 71/288 (24%), Positives = 130/288 (45%)
Query: 87 LVLMLRAPDSDHESALLALLNLAVK-DEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXX 145
L+ LR+ + D + A + L K + N+I I EAGA+ +++ L S D QE+
Sbjct: 328 LMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVT 387
Query: 146 XXXXXXXXXVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTN 205
NK I S AIP +VE+L+ GS + + +A L +LS +N I
Sbjct: 388 ALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAG 447
Query: 206 PIPSIVDLLIFCKKSSKTAEKCTSLIESLVGFDEGRI-VLTSXXXXXXXXXXXXXNGSLQ 264
IP +++LL C S + + + I +L + ++ + + G +
Sbjct: 448 AIPPLINLL--CDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMI 505
Query: 265 AREHAVGALLMMCQSDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPY 324
+ A+ L ++ + K I R IP L+E+ G+P+++ A +L LL +
Sbjct: 506 --DEALSLLSILAGNPEGKI--VIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADT 561
Query: 325 PRS-ELQPDTLENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLR 371
++ + +E+ + + S+ D KA +L E++ + E SL+
Sbjct: 562 EQTLAAKAAGVEDALKEL-SETGTDRAKRKASSIL-ELMHQANEDSLK 607
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 238 (88.8 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 81/282 (28%), Positives = 134/282 (47%)
Query: 43 AVHRAL-HLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPD-SDH 98
+V RAL + S + + A EIR L+K S R +A+A + LV +L + D +
Sbjct: 331 SVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQ 390
Query: 99 ESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKP 158
E+A+ +LNL++ E NK I+ AGA+ I+ L++ + +E NK
Sbjct: 391 ENAITCVLNLSIY-ENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKI 449
Query: 159 FISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCK 218
I SGAIP LV++L G+ + K DA AL NL + N + + ++V +L
Sbjct: 450 IIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDST 509
Query: 219 KSSKTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQ 278
+ E T ++ L + + + + + + RE+A LL +C+
Sbjct: 510 RHRMVDEALT-ILSVLANNQDAKSAIVKANTLPALIGILQTDQT-RNRENAAAILLSLCK 567
Query: 279 SDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLR 320
D K I R G + L++L+ GT + + KA +LL+LLR
Sbjct: 568 RDTEKLIT-IGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 62/243 (25%), Positives = 109/243 (44%)
Query: 84 VQPLVLMLRAPDS-DHESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEY 142
++ LV L + + D +A+ + +L+ + N+I I EAGA+ +++ L S D+ QE
Sbjct: 333 IRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQEN 392
Query: 143 XXXXXXXXXXXXVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIIL 202
NK I +GA+ +V++LR G+ +A+ +A L +LS +N II
Sbjct: 393 AITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIG 452
Query: 203 GTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGF-DEGRIVLTSXXXXXXXXXXXXXNG 261
G+ IP++VDLL K + T+L + ++GR V
Sbjct: 453 GSGAIPALVDLLENGTPRGKK-DAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRH 511
Query: 262 SLQAREHAVGALLMMCQSDRCKYREPILREGVIPGLLE-LTIQGTPKSQTKARTLLQLL- 319
+ + A+ L ++ + K I++ +P L+ L T + A LL L
Sbjct: 512 RMV--DEALTILSVLANNQDAK--SAIVKANTLPALIGILQTDQTRNRENAAAILLSLCK 567
Query: 320 RDS 322
RD+
Sbjct: 568 RDT 570
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 232 (86.7 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 76/274 (27%), Positives = 133/274 (48%)
Query: 59 KLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLML-RAPDSDHESA----LLALLNLAVK 111
K +IR L K + R + + V+ L+ L A + ++ SA +AL NLAV
Sbjct: 439 KCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVD 498
Query: 112 DEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVN--KPFISASGAIPLL 169
+ +NK ++ +G II L+ N + + KP I +S A+P +
Sbjct: 499 NNRNKELMLASG----IIPLLEEMLCNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFM 554
Query: 170 VEILRYGSQ-QAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCT 228
V +L ++ Q K DA+ +L +LST+P N+ +L + + ++ L I + EK
Sbjct: 555 VNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTI--SDEQRWTEKSL 612
Query: 229 SLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQ-SDRCKYREP 287
+++ +LV + G+ + S G +E AV LL++C S+ C E
Sbjct: 613 AVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICS--EM 670
Query: 288 ILREGVIPGLLELTIQGTPKSQTKARTLLQLLRD 321
+L+EGVIP L+ +++ GT + + +A+ LL L R+
Sbjct: 671 VLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRE 704
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 232 (86.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 80/297 (26%), Positives = 137/297 (46%)
Query: 52 QSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDSDH-----ESALLA 104
+ +D K + +R L K ++ R + V+ + L + D+ E+ +A
Sbjct: 434 KEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMA 493
Query: 105 LLNLAVKDEKNKIKIVEAGA---LEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFIS 161
L NLAV + +NK ++ +G LE +IS QS Y KP I
Sbjct: 494 LFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKA-----KPVIG 548
Query: 162 ASGAIPLLVEILRYGSQ-QAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKS 220
+S A+ V +L ++ Q K DA+ AL NLST+ N+ +L +N I S+ ++ +
Sbjct: 549 SSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQ--VLASTGN 606
Query: 221 SKTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQ-S 279
EK +++ +L EG+ + + G +E AV L+++C S
Sbjct: 607 HLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGS 666
Query: 280 DRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLR-----DSPYPRSELQP 331
+ C + +L+EGVIP L+ +++ G+P+ + K++ LL L R D P P E P
Sbjct: 667 ESCI--QMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAP 721
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 229 (85.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 77/275 (28%), Positives = 130/275 (47%)
Query: 51 IQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDSD-HESALLALLN 107
+ S + + + +++R L + + R +A A + LV +L PDS E+A+ LLN
Sbjct: 388 LSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLN 447
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIP 167
L++ DE NK I GA+ II L++ + +E NK I S IP
Sbjct: 448 LSI-DEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIP 506
Query: 168 LLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKC 227
LV++L++G+ + K DA+ AL NLS + N + + +++LL K+ ++
Sbjct: 507 PLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLK--DKNLGMIDEA 564
Query: 228 TSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREP 287
S++ L EGR + G+ + +E A LL + S+ +
Sbjct: 565 LSILLLLASHPEGRQAI-GQLSFIETLVEFIRQGTPKNKECATSVLLEL-GSNNSSFILA 622
Query: 288 ILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDS 322
L+ GV L+E+T GT ++Q KA L+QL+ S
Sbjct: 623 ALQFGVYEYLVEITTSGTNRAQRKANALIQLISKS 657
Score = 193 (73.0 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 75/265 (28%), Positives = 127/265 (47%)
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIP 167
LA ++ +N++ I AGA+ ++ L PD +QE VNK IS GAIP
Sbjct: 406 LARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIP 465
Query: 168 LLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILG-TNPIPSIVDLLIFCKKSSKTAEK 226
++EIL G+++A+ ++ AL +LS +N + +G +N IP +VDLL K +
Sbjct: 466 NIIEILENGNREARENSAAALFSLSMLDEN-KVTIGLSNGIPPLVDLLQHGTLRGKK-DA 523
Query: 227 CTSLIE-SLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYR 285
T+L SL ++GR + G + + A+ LL++ + R
Sbjct: 524 LTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMI---DEALSILLLLASHP--EGR 578
Query: 286 EPILREGVIPGLLELTIQGTPKSQTKART-LLQL-LRDSPYPRSELQPDTLENIVCNIIS 343
+ I + I L+E QGTPK++ A + LL+L +S + + LQ E +V I +
Sbjct: 579 QAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLV-EITT 637
Query: 344 QIDGDEQSGKAKKMLAEMVQVSMEQ 368
G ++ + L +++ S EQ
Sbjct: 638 S--GTNRAQRKANALIQLISKS-EQ 659
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 227 (85.0 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 74/269 (27%), Positives = 125/269 (46%)
Query: 53 SDDPDLKLEAAREIRRLTKTSQRCRRQLAQA-VQPLVL-MLRAPD-SDHESALLALLNLA 109
S D + + AA E+R L K + R +A+A PL+L +L + D E A+ ALLNL+
Sbjct: 378 SPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLS 437
Query: 110 VKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLL 169
+ ++ NK I+ +GA+ I+ L++ + +E K I GAIP L
Sbjct: 438 IHED-NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPAL 496
Query: 170 VEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTS 229
V +L GSQ+ K DA AL NL + N + +P I+ L+ + ++ +
Sbjct: 497 VVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVT--NPTGALMDEAMA 554
Query: 230 LIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPIL 289
++ L EG+ + +G+ + RE+A +L +C +
Sbjct: 555 ILSILSSHPEGKAAI-GAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARA 613
Query: 290 RE-GVIPGLLELTIQGTPKSQTKARTLLQ 317
+E G++ L EL + GT + + KA LL+
Sbjct: 614 QECGIMVPLRELALNGTDRGKRKAVQLLE 642
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 86/349 (24%), Positives = 152/349 (43%)
Query: 60 LEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRAPDSDHE-SALLALLNLAVKDEKNKIK 118
+E + + K + C + L+ L +PD++ + SA L LA ++ N+I
Sbjct: 345 MEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRIC 404
Query: 119 IVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYGSQ 178
I EAGA+ ++S L S DL QE+ NK I +SGA+P +V +L+ GS
Sbjct: 405 IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSM 464
Query: 179 QAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGF- 237
+A+ +A L +LS + I G IP++V LL + S + + + + +L +
Sbjct: 465 EARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLL--GEGSQRGKKDAAAALFNLCIYQ 522
Query: 238 -DEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILREGVIPG 296
++GR + + G+L A+ ++L S + + I +P
Sbjct: 523 GNKGRAI-RAGLVPLIMGLVTNPTGALMDEAMAILSIL----SSHPEGKAAIGAAEPVPV 577
Query: 297 LLELTIQGTPKSQTKARTLLQLLRDSPYPRSELQPDTLENIVCNIIS-QIDG-DEQSGKA 354
L+E+ GTP+++ A ++ L + L I+ + ++G D KA
Sbjct: 578 LVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKA 637
Query: 355 KKMLAEM----VQVSMEQSLRHLQQRALV---CTPADLPIASVTSEVSS 396
++L M VQ EQ + Q A V TP +P + ++ S
Sbjct: 638 VQLLERMSRFLVQQQEEQESQS-QASAQVPPQATPEQVPENDIPEQLDS 685
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 218 (81.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 76/265 (28%), Positives = 126/265 (47%)
Query: 62 AAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDS-DHESALLALLNLAVKDEKNKIK 118
AA E+R L K + R +A+A + LV +L +PD E ++ ALLNL++ +E NK
Sbjct: 365 AAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSI-NEGNKGA 423
Query: 119 IVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYGSQ 178
IV+AGA+ I+ L++ + +E NK I A+GAI L+ +L G++
Sbjct: 424 IVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTR 483
Query: 179 QAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGFD 238
+ K DA A+ NL + N S + + + LL ++ +++ L
Sbjct: 484 RGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLK--DAGGGMVDEALAILAILSTNQ 541
Query: 239 EGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILRE-GVIPGL 297
EG+ + GS + RE+A L +C + R + RE G L
Sbjct: 542 EGKTAIAEAESIPVLVEIIRT-GSPRNRENAAAILWYLCIGNI--ERLNVAREVGADVAL 598
Query: 298 LELTIQGTPKSQTKARTLLQLLRDS 322
ELT GT +++ KA +LL+L++ +
Sbjct: 599 KELTENGTDRAKRKAASLLELIQQT 623
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 60/256 (23%), Positives = 107/256 (41%)
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIP 167
LA ++ N++ I EAGA+ ++ L SPD QE+ NK I +GAI
Sbjct: 372 LAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAIT 431
Query: 168 LLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKC 227
+VE+L+ GS +A+ +A L +LS +N I I +++ LL + K +
Sbjct: 432 DIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKK-DAA 490
Query: 228 TSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREP 287
T++ + + G + A+ A+L Q + E
Sbjct: 491 TAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEA 550
Query: 288 ILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPYPRSELQPDTLENIVCNIISQIDG 347
E IP L+E+ G+P+++ A +L L R + + ++ +++
Sbjct: 551 ---ES-IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGT 606
Query: 348 DEQSGKAKKMLAEMVQ 363
D KA +L E++Q
Sbjct: 607 DRAKRKAASLL-ELIQ 621
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 211 (79.3 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 78/297 (26%), Positives = 143/297 (48%)
Query: 48 LHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPD-SDHESALLA 104
+ +++ ++K AA+EIR L KT ++ R +A A+ L +L + D E+A+ A
Sbjct: 405 VRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTA 464
Query: 105 LLNLAVKDEKNKIKIVEA-GALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVN--KPFIS 161
LLNL++ E NK +I+E G L I+ LQ+ + N K ++
Sbjct: 465 LLNLSIF-EPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMN 523
Query: 162 ASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSS 221
GA+ L +L G+ + K DAVMAL NLSTHP++ + +L + + +++ L ++
Sbjct: 524 EPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSL----RND 579
Query: 222 KTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDR 281
+E+ + L+ ++ S G+ + +E+AV AL +C+
Sbjct: 580 TVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEICRRGG 639
Query: 282 CKYREPILREGVIPGL---LE-LTIQGTPKSQTKARTLLQLLRDSPYPRSELQPDTL 334
+ R IPGL ++ +T+ GT +++ KA ++++ + S P + TL
Sbjct: 640 SAL---VQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRSQMPSAMALGSTL 693
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 189 (71.6 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 88/359 (24%), Positives = 158/359 (44%)
Query: 46 RALH-LIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRAPDSDHESALL- 103
RAL L+ S++ DL+ AA +T+ R ++P++++L++ DS+ + A
Sbjct: 52 RALSTLVYSENIDLQRSAALAFAEITEKD--VREVNRDVLEPILILLQSADSEVQRAACG 109
Query: 104 ALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISAS 163
AL NLAV E NKI IVE G LEP+I + S ++ +Q NK I+ S
Sbjct: 110 ALGNLAVNTE-NKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKS 168
Query: 164 GAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKT 223
GA+ L ++ + + + +A AL N++ +N ++ +P +V LL + +
Sbjct: 169 GALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVSLL--SNEDADV 226
Query: 224 AEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCK 283
CT+ + ++ + R L S + S R L + +
Sbjct: 227 QYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMD-SPSPRVQCQATLALRNLASDSG 285
Query: 284 YREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRD-SPYPRSE---LQPDTLENIVC 339
Y+ I+R G +P L++L T Q + +R+ S +P +E ++ L+ +V
Sbjct: 286 YQVEIVRAGGLPHLVQLL---TCNHQPLVLAAVACIRNISIHPLNEALIIEAGFLKPLV- 341
Query: 340 NIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRAL-VCTPADLPIA-SVTSEVSS 396
++ D +E A L + S + L A+ C L + +V SE+S+
Sbjct: 342 GLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALLAAGAVDKCKELVLKVPLTVQSEISA 400
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 189 (71.6 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 88/359 (24%), Positives = 158/359 (44%)
Query: 46 RALH-LIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRAPDSDHESALL- 103
RAL L+ S++ DL+ AA +T+ R ++P++++L++ DS+ + A
Sbjct: 52 RALSTLVYSENIDLQRSAALAFAEITEKD--VREVNRDVLEPILILLQSADSEVQRAACG 109
Query: 104 ALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISAS 163
AL NLAV E NKI IVE G LEP+I + S ++ +Q NK I+ S
Sbjct: 110 ALGNLAVNTE-NKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKS 168
Query: 164 GAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKT 223
GA+ L ++ + + + +A AL N++ +N ++ +P +V LL + +
Sbjct: 169 GALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVSLL--SNEDADV 226
Query: 224 AEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCK 283
CT+ + ++ + R L S + S R L + +
Sbjct: 227 QYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMD-SPSPRVQCQATLALRNLASDSG 285
Query: 284 YREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRD-SPYPRSE---LQPDTLENIVC 339
Y+ I+R G +P L++L T Q + +R+ S +P +E ++ L+ +V
Sbjct: 286 YQVEIVRAGGLPHLVQLL---TCNHQPLVLAAVACIRNISIHPLNEALIIEAGFLKPLV- 341
Query: 340 NIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRAL-VCTPADLPIA-SVTSEVSS 396
++ D +E A L + S + L A+ C L + +V SE+S+
Sbjct: 342 GLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALLAAGAVDKCKELVLKVPLTVQSEISA 400
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 181 (68.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 90/368 (24%), Positives = 151/368 (41%)
Query: 46 RALH-LIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRAPDSDHESALLA 104
RAL L+ SD+ DL+ A+ +T+ R ++P++ +L++ D + + A A
Sbjct: 71 RALSTLVYSDNVDLQRSASLTFAEITERD--VREVDRDTLEPILFLLQSSDIEVQRAASA 128
Query: 105 LL-NLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISAS 163
L NLAV + NK+ IV G L P+I + SP++ +Q NK I+ S
Sbjct: 129 ALGNLAVNAD-NKVLIVALGGLAPLIKQMMSPNVEVQCNAVGCITNLATHEDNKAKIARS 187
Query: 164 GAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKT 223
GA+ L+ + + + + +A AL N++ DN ++ IP +V LL
Sbjct: 188 GALGPLIRLAKSKDMRVQRNATGALLNMTHSDDNRQQLVNAGAIPVLVQLL--SSSDVDV 245
Query: 224 AEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCK 283
CT+ + ++ R L + S + L SD K
Sbjct: 246 QYYCTTALSNIAVDASNRKRLAQTESRLVQSLVHLMDSSTPKVQCQAALALRNLASDE-K 304
Query: 284 YREPILREGVIPGLLELTIQGT--PKSQTKARTLLQL----LRDSPY-PRSELQP--DTL 334
Y+ I+R +P LL L +Q + P + + + L +SP L+P D L
Sbjct: 305 YQLEIVRAKGLPPLLRL-LQSSYLPLILSAVACIRNISIHPLNESPIIDAGFLKPLVDLL 363
Query: 335 -----ENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPADLPIAS 389
E I C+ IS + S K L ++Q Q + L R V +++ A
Sbjct: 364 GSTDNEEIQCHAISTLRNLAASSDRNKEL--VLQAGAVQKCKDLVLRVPVTVQSEMTAAI 421
Query: 390 VTSEVSSK 397
+S +
Sbjct: 422 AVLALSDE 429
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 180 (68.4 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 64/270 (23%), Positives = 126/270 (46%)
Query: 66 IRRLTKTSQRCRRQLA-QAVQPLV--LMLRAPDSDHESALLALLNLAVKDEKNKIKIVEA 122
+R++T++S+ R L + + L++ + +A +++NL++ +++NK+KIV +
Sbjct: 258 LRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSL-EKQNKVKIVRS 316
Query: 123 GALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYG-SQQAK 181
G + +I L+S QE+ NK I GA+ L+ LR S++A+
Sbjct: 317 GFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERAR 376
Query: 182 FDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGFDEGR 241
DA +AL +LS P N + ++ +P+++ ++ +S + + ++ +L +G+
Sbjct: 377 QDAALALYHLSLIPSNRTRLVRAGAVPTLLSMV----RSGDSTSRILLVLCNLAACPDGK 432
Query: 242 -IVLTSXXXXXXXXXXXXXNG--SLQAREHAVGALLMMCQSDRCKYREPILREGVIPGLL 298
+L G S ARE+ V LL +CQ + ++R G L+
Sbjct: 433 GAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGN-LRFRGLASEAGAEEVLM 491
Query: 299 ELTIQGTPKSQTKARTLLQLLRDSPYPRSE 328
E+ G + + KA +L +R SE
Sbjct: 492 EVEENGNERVKEKASKILLAMRGGGGGESE 521
>TAIR|locus:2150295 [details] [associations]
symbol:ARIA "ARM repeat protein interacting with ABF2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IMP]
[GO:0010187 "negative regulation of seed germination" evidence=IMP]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000210
InterPro:IPR013069 InterPro:IPR016024 Pfam:PF00514 Pfam:PF00651
PROSITE:PS50097 PROSITE:PS50176 SMART:SM00185 SMART:SM00225
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009651 EMBL:AF296837
eggNOG:COG5064 HOGENOM:HOG000030229 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0010187
EMBL:AY058878 EMBL:AK317640 EMBL:AK220904 IPI:IPI00546696
RefSeq:NP_850852.1 UniGene:At.20128 ProteinModelPortal:B9DHT4
SMR:B9DHT4 STRING:B9DHT4 PaxDb:B9DHT4 PRIDE:B9DHT4
EnsemblPlants:AT5G19330.1 GeneID:832053 KEGG:ath:AT5G19330
TAIR:At5g19330 OMA:SEAFHAM PhylomeDB:B9DHT4 ArrayExpress:B9DHT4
Genevestigator:B9DHT4 Uniprot:B9DHT4
Length = 710
Score = 181 (68.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 60/196 (30%), Positives = 98/196 (50%)
Query: 50 LIQSDDPDLKLEAAREIRRLTKTSQRCRRQL--AQAVQPLVLMLRA--PDSDHESALLAL 105
++ S+D + EA I L +S ++++ A A+QP++ +L + P+S E+ALL L
Sbjct: 248 MLGSEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCCPESQREAALL-L 306
Query: 106 LNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGA 165
A D K+ IV+ GA+ P+I LQSPD+ L+E N+ I+ SG
Sbjct: 307 GQFASTDSDCKVHIVQRGAVRPLIEMLQSPDVQLKEMSAFALGRLAQDAHNQAGIAHSGG 366
Query: 166 IPLLVEIL--RYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVD--LLIFCKKS- 220
+ L+++L R GS Q +A AL L+ + DN+S + I + D ++ K
Sbjct: 367 LGPLLKLLDSRNGSLQ--HNAAFALYGLADNEDNVSDFIRVGGIQKLQDGEFIVQATKDC 424
Query: 221 -SKTAEKCTSLIESLV 235
SKT ++ I V
Sbjct: 425 VSKTLKRLEEKIHGRV 440
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 88/357 (24%), Positives = 160/357 (44%)
Query: 50 LIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAV-QPLVLMLRAPDSDHESALLALL-N 107
L+ SD+ +L+ AA +T ++ RQ+++ V +P++++L++ D + A A L N
Sbjct: 55 LVYSDNLNLQRSAALAFAEIT---EKYVRQVSREVLEPILILLQSQDPQIQVAACAALGN 111
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIP 167
LAV +E NK+ IVE G LEP+I+ + ++ +Q NK I+ SGA+
Sbjct: 112 LAVNNE-NKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNKHKIATSGALI 170
Query: 168 LLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKC 227
L ++ + + + +A AL N++ +N ++ +P +V LL C
Sbjct: 171 PLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLL--SSTDPDVQYYC 228
Query: 228 TSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREP 287
T+ + + + DE + S +R L + + Y+
Sbjct: 229 TTALSN-IAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLE 287
Query: 288 ILREGVIPGLLELTIQGTPKSQTKARTLLQLLRD-SPYPRSE-LQPDT--LENIVCNIIS 343
I+R G +P L++L IQ A + +R+ S +P +E L D L+ +V ++
Sbjct: 288 IVRAGGLPHLVKL-IQSDSIPLVLAS--VACIRNISIHPLNEGLIVDAGFLKPLV-RLLD 343
Query: 344 QIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRALV--CTPA--DLPIASVTSEVSS 396
D +E A L + S E++ + + V C D P+ SV SE+S+
Sbjct: 344 YKDSEEIQCHAVSTLRNLA-ASSEKNRKEFFESGAVEKCKELALDSPV-SVQSEISA 398
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 44/187 (23%), Positives = 87/187 (46%)
Query: 48 LHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDSDHE-SALLA 104
L L+QS DP +++ A + L ++ + + + ++PL+ + + + + +A+
Sbjct: 91 LILLQSQDPQIQVAACAALGNLAVNNEN-KLLIVEMGGLEPLINQMMGDNVEVQCNAVGC 149
Query: 105 LLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASG 164
+ NLA +D+ NK KI +GAL P+ +S + +Q N+ + +G
Sbjct: 150 ITNLATRDD-NKHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAG 208
Query: 165 AIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTA 224
A+P+LV +L ++ ALSN++ N + T P +V L+ S +
Sbjct: 209 AVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLAQTEP--RLVSKLVSLMDSPSSR 266
Query: 225 EKCTSLI 231
KC + +
Sbjct: 267 VKCQATL 273
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 56/269 (20%), Positives = 114/269 (42%)
Query: 93 APDSDHESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXX 152
+P +D+E + LL L ++K+++ G L+ + + + S +LNLQ
Sbjct: 18 SPIADNEREAVTLL-LGYLEDKDQLDFYSGGPLKALTTLVYSDNLNLQRSAALAFAEITE 76
Query: 153 XXVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVD 212
V + +S P+L+ +L+ Q + A AL NL+ + +N +I+ + +++
Sbjct: 77 KYVRQ--VSREVLEPILI-LLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLIN 133
Query: 213 LLIFCKKSSKTAEKCTSL--IESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAV 270
++ +C ++ I +L D+ + + + ++ + +A
Sbjct: 134 QMM----GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK-HIRVQRNAT 188
Query: 271 GALLMMCQSDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPYPRSELQ 330
GALL M S+ + R+ ++ G +P L+ L P Q T L + R +L
Sbjct: 189 GALLNMTHSE--ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 246
Query: 331 PDTLENIVCNIISQIDGDEQSGKAKKMLA 359
T +V ++S +D K + LA
Sbjct: 247 -QTEPRLVSKLVSLMDSPSSRVKCQATLA 274
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 64/269 (23%), Positives = 124/269 (46%)
Query: 66 IRRLTKTSQRCRRQLAQA-VQPLV--LMLRAPDSDHESALLALLNLAVKDEKNKIKIVEA 122
+R++T+T+ R L + L+ +++ +AL +L+NL++ D+KNK+ IV
Sbjct: 248 MRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSL-DKKNKLTIVRL 306
Query: 123 GALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYG-SQQAK 181
G + +I L+S QE+ NK I GA+ L+ LR S + +
Sbjct: 307 GFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTR 366
Query: 182 FDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGFDEGR 241
D+ +AL +L+ + N S ++ +P++ ++ +S ++A + +I +L EGR
Sbjct: 367 HDSALALYHLTLNQTNRSKLVRLGAVPALFSMV----RSGESASRALLVICNLACCSEGR 422
Query: 242 ---------IVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILREG 292
+L S ARE+ V AL + + +++
Sbjct: 423 SAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSH-ESLRFKGLAKEAR 481
Query: 293 VIPGLLELTIQGTPKSQTKARTLLQLLRD 321
+ L E+ +GT +++ KA+ +LQL+R+
Sbjct: 482 AVEVLKEVEERGTERAREKAKKILQLMRE 510
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 76/285 (26%), Positives = 126/285 (44%)
Query: 50 LIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA--VQPLVLMLRAPDSD-HESALLALL 106
LI+ D+ ++ ++A EIR LTKTS R L +A V+ L+ +LR+ D E+A+ ++
Sbjct: 383 LIKGDEEEM-VKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIM 441
Query: 107 NLAVKDEKNKIKIV--EAGALEPIISFLQS-PDLNLQEYXXXXXXXXXXXXVNKPFISA- 162
NL+ KD K +IV + G L I+ L ++Y I
Sbjct: 442 NLS-KDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEI 500
Query: 163 SGAIPLLVEILR---YGSQQAKFDAVMAL-SNLSTHPDNLSIILGTNPIPSIVDLLIFCK 218
S AIP LV I++ YG AK +A++A+ S L PDN IL +P ++DL+ +
Sbjct: 501 SDAIPGLVRIVKSCDYGDS-AKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEE 559
Query: 219 KSSKTAEKCTSLIESLVGFDEGRI-VLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMC 277
S +++ + + +G I VL S ++H V LL +C
Sbjct: 560 ISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLC 619
Query: 278 QSDRCKYREPILREGVIPG-LLELTIQGTPKSQTKARTLLQLLRD 321
+ + + I G L + G KA L++++ +
Sbjct: 620 HNGGSDVVGSLAKNPSIMGSLYTASSNGELGGGKKASALIKMIHE 664
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 69/279 (24%), Positives = 121/279 (43%)
Query: 52 QSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRAPDSDH----ESALLALLN 107
QS KLE+ + RLTK RR++ ++ + L DS + E +L LLN
Sbjct: 104 QSSSNASKLESLTRLVRLTKRDSSIRRKVTES-GAVRAALDCVDSCNQVLQEKSLSLLLN 162
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQ--SPDLNLQEYXXXXXXXXXXXXVNKPFI-SASG 164
L+++D+ NK+ +V G + I++ L+ SPD + VNK I S
Sbjct: 163 LSLEDD-NKVGLVADGVIRRIVTVLRVGSPDC--KAIAATLLTSLAVVEVNKATIGSYPD 219
Query: 165 AIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTA 224
AI LV +LR G+ + + ++ AL L + PDN ++ +P +V+ +
Sbjct: 220 AISALVSLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEA------ADSGL 273
Query: 225 EKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKY 284
E+ ++ LV GR ++ NG+L+ ++++ L +C +
Sbjct: 274 ERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSG-EI 332
Query: 285 REPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSP 323
+ + REGV+ + K + A L+ L P
Sbjct: 333 VDEVKREGVVEICFGFEDNESEKIRRNATILVHTLLGIP 371
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 165 (63.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 93/369 (25%), Positives = 161/369 (43%)
Query: 46 RALHLIQ-SDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRAPDSD-HESALL 103
RAL ++ SD+ DL+ AA +T+ R + ++P++ +L++PD++ +A +
Sbjct: 50 RALTILAYSDNLDLQRSAALAFAEITEKD--VREVDRETIEPVLFLLQSPDAEIQRAASV 107
Query: 104 ALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISAS 163
AL NLAV E NK +V+ L+ +I + SP + +Q NK I+ S
Sbjct: 108 ALGNLAVNAE-NKALVVKLNGLDLLIRQMMSPHVEVQCNAVGCITNLATLDENKSKIAHS 166
Query: 164 GAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKT 223
GA+ L + + + + +A AL N++ +N ++ IP +V LL SS T
Sbjct: 167 GALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRQQLVSAGTIPVLVSLL----PSSDT 222
Query: 224 AEK--CTSLIESL-VGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSD 280
+ CT+ I ++ V + + S S + + A AL + +
Sbjct: 223 DVQYYCTTSISNIAVDAVHRKRLAQSEPKLVRSLIQLMDTSSPKVQCQAALALRNLASDE 282
Query: 281 RCKYREPILREGVIPGLLELTIQG-TP---KSQTKARTL-LQLLRDSPY-PRSELQP--D 332
R Y+ I++ +P LL L P S R + + L +SP L+P D
Sbjct: 283 R--YQIEIVQSNALPSLLRLLRSSYLPLILASVACIRNISIHPLNESPIIDAGFLRPLVD 340
Query: 333 TL-----ENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPADLPI 387
L E I C+ +S + S + K +++ + Q LR C D P+
Sbjct: 341 LLSCTENEEIQCHAVSTLRNLAASSERNKRA--IIEANAIQKLR--------CLILDAPV 390
Query: 388 ASVTSEVSS 396
SV SE+++
Sbjct: 391 -SVQSEMTA 398
>TAIR|locus:2038598 [details] [associations]
symbol:AT2G27430 "AT2G27430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY169003 EMBL:AY954802 IPI:IPI00540469
RefSeq:NP_180312.2 UniGene:At.38764 ProteinModelPortal:Q8GUS7
SMR:Q8GUS7 PRIDE:Q8GUS7 EnsemblPlants:AT2G27430.1 GeneID:817288
KEGG:ath:AT2G27430 TAIR:At2g27430 eggNOG:NOG235856
HOGENOM:HOG000241608 InParanoid:Q8GUS7 OMA:KNMEMIT PhylomeDB:Q8GUS7
ProtClustDB:CLSN2690947 Genevestigator:Q8GUS7 Uniprot:Q8GUS7
Length = 438
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 75/351 (21%), Positives = 149/351 (42%)
Query: 59 KLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDSDHESALL-ALLNLAVKDEKN 115
K +AA EI +L + ++ R+ +A+ +Q LV M+ + S H+ A + AL+ L+ N
Sbjct: 94 KEKAAIEIEKLAREDKKTRKLMAELGVIQILVSMVASDVSGHQKAAVNALIQLSHGTYTN 153
Query: 116 KIKIVEAGALEPIISFLQSPDLNLQE-YXXXXXXXXXXXXVNKPFISASGAIPLLVEILR 174
K +V A + ++ D + + + P +++S +P L++ +
Sbjct: 154 KALMVNADICSKLPKNVEVLDQSTRHAFAELLLSLSSLTNTQLP-VASSQILPFLMDTMN 212
Query: 175 YGSQQAKFDAVMALSNLSTHPDNLSIIL-GTNPIP--SIVDLLIFCKKSSKTAEKCTSLI 231
S K + L+ +S NL ++L P+ V+ L+ + +EK + +
Sbjct: 213 SDSTDMKTKEI-CLATIS----NLCLVLENAGPLVLNGAVETLLSLMSTKDLSEKALASL 267
Query: 232 ESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILRE 291
LV G+ + + + +LM+ RE + +
Sbjct: 268 GKLVVTQMGKKAMEDCLLVSKGLIEILTWEDIPKCQEYAAYILMVLAHQSWSQREKMAKA 327
Query: 292 GVIPGLLELTIQGTPKSQTKARTLLQLLRDSPY----PRSELQPDTLENIVCNIISQIDG 347
G++P LLE+++ G+P Q +A LLQ +D P S Q + + + +S G
Sbjct: 328 GIVPVLLEVSLLGSPLVQKRAVKLLQWFKDERNVRMGPHSGPQTGWVSPGMGSPMSPRSG 387
Query: 348 DEQSGKAKKMLAEMVQVSMEQSLRHLQQRA-LVCTPADLPIASVTSEVSSK 397
+E +KM+ +V+ S+ +++ + +R L + S+ SSK
Sbjct: 388 EE----GRKMMKNLVKQSLYKNMEMITRRGNLDMESESCRLKSLIISTSSK 434
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 156 (60.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 69/271 (25%), Positives = 115/271 (42%)
Query: 62 AAREIRRLTKTSQRCRRQL--AQAVQPLVLMLRAPDSD-HESALLALLNLAVKDEKNKIK 118
A REIR TKTS R L A AV PL+ +L + D E+A+ +LNL+ K K K
Sbjct: 408 AVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLS-KHVTGKSK 466
Query: 119 IVEAGALEPIISFL-QSPDLNLQEYXXXXXXXXXXXXVNKPFISAS-GAIPLLVEILR-- 174
I G L+ ++ L + + Y I + AIP L+ I++
Sbjct: 467 IAGEG-LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGD 525
Query: 175 -YGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIES 233
YG AK A++A+ L DN +L +P ++DLL + S C + +
Sbjct: 526 DYGDS-AKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAK 584
Query: 234 LVGFDEGRI-VLTSXXXXXXXXXXXXXNGS-LQAREHAVGALLMMCQSDRCKYREPILRE 291
L + +G I V+ S + ++H VG +L +C + +++
Sbjct: 585 LAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKN 644
Query: 292 GVIPGLLELTIQ-GTPKSQTKARTLLQLLRD 321
++ G L + G KA L++++ +
Sbjct: 645 SLVMGSLYTVLSNGEYGGSKKASALIRMIHE 675
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 150 (57.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 65/276 (23%), Positives = 124/276 (44%)
Query: 61 EAAREIRRLTKT--SQR---CRRQLAQAVQPLVLMLRAPDSDHESALLALLNLAVKDEKN 115
EA IRR+T+ S R C ++ A++ L++ A + +A+L L+L ++ N
Sbjct: 247 EALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSL---EKSN 303
Query: 116 KIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRY 175
K+KIV +G + P+I L+ + QE+ NK I G + L+ ++R
Sbjct: 304 KVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRV 363
Query: 176 GSQQAKFDAVMALSNLSTHPDN---------LSIILGTNPIPSIVD--LLIFCKKSSKTA 224
G++ + D+ +AL +LS N + ++LG + ++ LLI C +S
Sbjct: 364 GTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMIGRVLLILCNMASCPV 423
Query: 225 EKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKY 284
+ +L++S G E + + N S RE V L + ++
Sbjct: 424 SR-PALLDS--GGVECMVGVLRRDREV--------NES--TRESCVAVLYGLSHDGGLRF 470
Query: 285 REPILREGVIPGLLELTIQGTPKSQTKARTLLQLLR 320
+ + + L+++ G +++ KAR +L++LR
Sbjct: 471 KGLAMAANAVEELVKVERSGRERAKQKARRVLEVLR 506
Score = 39 (18.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 7 NLSTASSSSDTNPDTP 22
+LS +SSSS +N ++P
Sbjct: 38 SLSRSSSSSSSNNNSP 53
>ZFIN|ZDB-GENE-040718-22 [details] [associations]
symbol:kpna2 "karyopherin alpha 2 (RAG cohort 1,
importin alpha 1)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
ZFIN:ZDB-GENE-040718-22 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085982 EMBL:BX085195 IPI:IPI00996105
Ensembl:ENSDART00000126596 ArrayExpress:F1QG82 Bgee:F1QG82
Uniprot:F1QG82
Length = 546
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 58/270 (21%), Positives = 119/270 (44%)
Query: 54 DDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDSD-HESALLALLNLAV 110
D P ++ EAA + + + + Q A+ + ++ +P + E A+ AL N+A
Sbjct: 150 DSPPIQFEAAWALTNIASGTSDQTSAVVQGGAIPAFISLISSPHAHISEQAVWALGNIAG 209
Query: 111 KDEKNKIKIVEAGALEPIISFLQSPDLNL--QEYXXXXXXXXXXXXVNK----PFISASG 164
+ ++++ GA+ P+++ L PDL++ Y NK P +
Sbjct: 210 DGSGYRDRVIKHGAIPPLLALLAVPDLSVFPAGYLRNVTWTLSNLCRNKNPAPPLEAVKQ 269
Query: 165 AIPLLVEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLLIFCKKSSKT 223
+P L+ +L++ ++ D A+S L+ P D + +++ +P +V LL + S T
Sbjct: 270 ILPTLICLLQHSDKEVLADTCWAISYLTDGPNDRIEVVVNAGVVPRLVQLLASGELSIVT 329
Query: 224 AEKCTSLIESLVGFDEG-RIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRC 282
S+ + G DE + VL + ++Q + A L +
Sbjct: 330 PS-LRSIGNIVTGTDEQTQAVLEAGALPMFPALLRHQKSNIQ--KEASWTLSNITAGRDY 386
Query: 283 KYREPILREGVIPGLLELTIQGTPKSQTKA 312
+ +E ++ G++P L+E+ +G K+Q +A
Sbjct: 387 QIQE-VINAGIVPYLVEVLRRGDYKTQKEA 415
>TAIR|locus:2195351 [details] [associations]
symbol:IMPA-4 "AT1G09270" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=ISS;RCA] [GO:0008565 "protein transporter activity"
evidence=IEA;ISS] [GO:0030581 "symbiont intracellular protein
transport in host" evidence=IPI] [GO:0080034 "host response to
induction by symbiont of tumor, nodule or growth in host"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006007 "glucose catabolic
process" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006820 "anion transport" evidence=RCA]
[GO:0006862 "nucleotide transport" evidence=RCA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=RCA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0015696
"ammonium transport" evidence=RCA] [GO:0015802 "basic amino acid
transport" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0043090 "amino acid
import" evidence=RCA] [GO:0043269 "regulation of ion transport"
evidence=RCA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
EMBL:CP002684 GO:GO:0005829 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
EMBL:AC003114 GO:GO:0043657 HOGENOM:HOG000167616 HSSP:Q02821
UniGene:At.48171 UniGene:At.66826 EMBL:AY090944 EMBL:AY117313
EMBL:AK316689 IPI:IPI00537215 PIR:F86225 RefSeq:NP_172398.1
RefSeq:NP_849623.1 SMR:O80480 IntAct:O80480 STRING:O80480
EnsemblPlants:AT1G09270.1 EnsemblPlants:AT1G09270.2 GeneID:837448
KEGG:ath:AT1G09270 TAIR:At1g09270 InParanoid:O80480 OMA:IQMIFSS
ProtClustDB:CLSN2679246 Genevestigator:O80480 GO:GO:0080034
GO:GO:0030581 Uniprot:O80480
Length = 538
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 54 DDPDLKLEAAREIRRLTK-TSQRCRRQLAQAVQPLV--LMLRAPDSDHESALLALLNLAV 110
D P L+ EAA + + TS R + Q P+ L+ A D E A+ AL N+A
Sbjct: 135 DHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAG 194
Query: 111 KDEKNKIKIVEAGALEPIISFL-QSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLL 169
+ ++ GALEP+++ L ++ L++ PF A+P+L
Sbjct: 195 DSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPIL 254
Query: 170 VEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLL 214
+++ ++ DA ALS LS P D + ++ P +V+LL
Sbjct: 255 RQLIYLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELL 300
>UNIPROTKB|F1NJS6 [details] [associations]
symbol:KPNA2 "Importin subunit alpha" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IEA] [GO:0008139 "nuclear localization sequence
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0008139 GO:GO:0006607
GeneTree:ENSGT00610000085982 OMA:LMIEECG EMBL:AADN02030017
IPI:IPI00571040 PRIDE:F1NJS6 Ensembl:ENSGALT00000005672
Uniprot:F1NJS6
Length = 528
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 63/274 (22%), Positives = 117/274 (42%)
Query: 50 LIQSDDPDLKLEAAREIRRLTK-TSQRCRRQLAQAVQPLVLMLRAPDSDH--ESALLALL 106
L ++D ++ E+A + + TS++ + + P + L A H E A+ AL
Sbjct: 127 LSRADCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHIHISEQAVWALG 186
Query: 107 NLAVKDEKNKIKIVEAGALEPIISFLQSPDLN--LQEYXXXXXXXXXXXXVNK---PFIS 161
N+A + +++ GA+EP+++ L PDL+ Y NK P I
Sbjct: 187 NIAGDGSIYRDLVIKFGAIEPLLTLLAVPDLSSLASGYLRNVTWTLSNLCRNKNPAPPIE 246
Query: 162 ASGAI-PLLVEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLLIFCKK 219
A I P LV +L + + D ALS L+ D + +++ T +P +V LL C +
Sbjct: 247 AIEQILPTLVRLLHHDDHEVLADTCWALSYLTDGSNDRIEVVVKTGLVPQLVKLL-GCGE 305
Query: 220 SSKTAEKCTSLIESLVGFDEG-RIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQ 278
++ + G DE +IV+ S ++Q + + +
Sbjct: 306 LPIVTPSLRAIGNIVTGTDEQTQIVIDSGALSVFPSLLSHHKNNIQKEAAWTMSNITAGR 365
Query: 279 SDRCKYREPILREGVIPGLLELTIQGTPKSQTKA 312
D+ + ++ G++P L+ + +G KSQ +A
Sbjct: 366 QDQI---QQVVDHGLVPYLIGILRKGDFKSQKEA 396
>TAIR|locus:2155929 [details] [associations]
symbol:IMPA-5 "importin alpha isoform 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=IEA;ISS] [GO:0009407 "toxin catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
eggNOG:COG5064 GO:GO:0006606 EMBL:AB016872 HOGENOM:HOG000167616
HSSP:Q02821 EMBL:DQ447054 IPI:IPI00516302 RefSeq:NP_199742.1
UniGene:At.55452 ProteinModelPortal:Q9FJ09 SMR:Q9FJ09 PaxDb:Q9FJ09
PRIDE:Q9FJ09 EnsemblPlants:AT5G49310.1 GeneID:834991
KEGG:ath:AT5G49310 TAIR:At5g49310 InParanoid:Q9FJ09
PhylomeDB:Q9FJ09 Genevestigator:Q9FJ09 Uniprot:Q9FJ09
Length = 519
Score = 139 (54.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 44 VHRALHLIQSDD-PDLKLEAAREIRRLTK-TSQRCRRQLAQAVQPL-VLMLRAPDSD-HE 99
V R + ++ DD P L+ EAA + + S+ + + V PL V +L +PD D E
Sbjct: 115 VPRFVEFLKKDDNPKLQFEAAWALTNIASGASEHTKVVIDHGVVPLFVQLLASPDDDVRE 174
Query: 100 SALLALLNLAVKDEKNKIKIVEAGALEPIISFLQS-PDLNLQEYXXXXXXXXXXXXVNKP 158
A+ L N+A + + ++ +GA P++ L + L++ + P
Sbjct: 175 QAIWGLGNVAGDSIQCRDFVLNSGAFIPLLHQLNNHATLSILRNATWTLSNFFRGKPSPP 234
Query: 159 FISASGAIPLLVEILRYGSQQAKFDAVMALSNLS-THPDNLSIILGTNPIPSIVDLL 214
F +P+L ++ +Q DA ALSNLS +N+ ++ +P +V+LL
Sbjct: 235 FDLVKHVLPVLKRLVYSDDEQVLIDACWALSNLSDASNENIQSVIEAGVVPRLVELL 291
Score = 41 (19.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 286 EPILREGVIPGLLELTIQGTP 306
+ ++ GV+P L+EL +P
Sbjct: 276 QSVIEAGVVPRLVELLQHASP 296
>TAIR|locus:2179842 [details] [associations]
symbol:ABAP1 "ARMADILLO BTB protein 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0031261 "DNA replication
preinitiation complex" evidence=IDA] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:2000104 "negative regulation
of DNA-dependent DNA replication" evidence=IMP] InterPro:IPR000225
InterPro:IPR000210 InterPro:IPR013069 InterPro:IPR016024
Pfam:PF00514 Pfam:PF00651 PROSITE:PS50097 PROSITE:PS50176
SMART:SM00185 SMART:SM00225 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:FJ422582 EMBL:AL391711
EMBL:AY074524 IPI:IPI00547704 RefSeq:NP_196810.5 UniGene:At.28791
ProteinModelPortal:B7U179 SMR:B7U179 IntAct:B7U179 STRING:B7U179
PRIDE:B7U179 EnsemblPlants:AT5G13060.1 GeneID:831145
KEGG:ath:AT5G13060 TAIR:At5g13060 eggNOG:COG5064
HOGENOM:HOG000030229 InParanoid:Q8RY88 OMA:ASSDIFR PhylomeDB:B7U179
ProtClustDB:CLSN2686776 Genevestigator:B7U179 GO:GO:0031261
GO:GO:0006261 GO:GO:2000104 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Uniprot:B7U179
Length = 737
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 48/165 (29%), Positives = 80/165 (48%)
Query: 56 PDLKLE--AAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDSD-HESALLALLNLAV 110
PD+K++ AA +R ++ + + Q+ + A+ LVLML++ DS H A+ A+ NL
Sbjct: 237 PDVKVQRAAAGALRTVSFRNDENKSQIVELNALPTLVLMLQSQDSTVHGEAIGAIGNLVH 296
Query: 111 KDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVN-KPFISASGAIPLL 169
K +++ AGAL+P+I L S L Q + K I+ GAI L
Sbjct: 297 SSPDIKKEVIRAGALQPVIGLLSSTCLETQREAALLIGQFAAPDSDCKVHIAQRGAITPL 356
Query: 170 VEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLL 214
+++L +Q + AL L+ N + I I S+++LL
Sbjct: 357 IKMLESSDEQVVEMSAFALGRLAQDAHNQAGIAHRGGIISLLNLL 401
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/167 (25%), Positives = 79/167 (47%)
Query: 50 LIQSDDPDLKLEAAREIRRLTKTSQRCRRQL--AQAVQPLVLMLRAP--DSDHESALLAL 105
++QS D + EA I L +S ++++ A A+QP++ +L + ++ E+ALL +
Sbjct: 275 MLQSQDSTVHGEAIGAIGNLVHSSPDIKKEVIRAGALQPVIGLLSSTCLETQREAALL-I 333
Query: 106 LNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGA 165
A D K+ I + GA+ P+I L+S D + E N+ I+ G
Sbjct: 334 GQFAAPDSDCKVHIAQRGAITPLIKMLESSDEQVVEMSAFALGRLAQDAHNQAGIAHRGG 393
Query: 166 IPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVD 212
I L+ +L + + +A AL L+ + +N++ + I + D
Sbjct: 394 IISLLNLLDVKTGSVQHNAAFALYGLADNEENVADFIKAGGIQKLQD 440
>DICTYBASE|DDB_G0272318 [details] [associations]
symbol:DDB_G0272318 "putative importin subunit alpha
B" species:44689 "Dictyostelium discoideum" [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
dictyBase:DDB_G0272318 GO:GO:0005737 GO:GO:0005635 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006606 EMBL:AAFI02000008 HSSP:Q02821 OMA:HNDNKVA
RefSeq:XP_645137.1 ProteinModelPortal:Q76P29 SMR:Q76P29
STRING:Q76P29 EnsemblProtists:DDB0302555 GeneID:8618307
KEGG:ddi:DDB_G0272318 ProtClustDB:CLSZ2846903 Uniprot:Q76P29
Length = 516
Score = 134 (52.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 58/270 (21%), Positives = 113/270 (41%)
Query: 50 LIQSDDPDLKLEAAREIRRLTK-TSQRCRRQLAQ-AVQPLVLMLRAPDSD-HESALLALL 106
L D P L+ EAA + + T ++ R + A+Q VL+L +P D E A+ AL
Sbjct: 119 LYMQDFPQLQFEAAWALTNIASGTPEQTRVVIENGAIQVFVLLLSSPHDDVREQAVWALG 178
Query: 107 NLAVKDEKNKIKIVEAGALEPIISFLQSP---DLNLQEYXXXXXXXXXXXXVNKPFISAS 163
N+A + ++ AL P++S LQ+P +++ PF
Sbjct: 179 NIAGDSHYCRDLVLSHNALPPLLSLLQNPAAIKVSMVRNATWTLSNFCRGKPQPPFEIVR 238
Query: 164 GAIPLLVEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLLIFCKKSSK 222
++P+L +++ Y ++ DA ALS LS + + ++ +V+LL + +
Sbjct: 239 ASLPVLAKLIYYQDEEVLIDACWALSYLSDGSNERIQEVIDAKVCRKMVELLGHPTIAVQ 298
Query: 223 TAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRC 282
T T I ++V D+ + + + R+ A + + D+
Sbjct: 299 TPALRT--IGNIVTGDDNQTQIVLSVQALSHLLNLLQSPKRAIRKEACWTISNITAGDKN 356
Query: 283 KYREPILREGVIPGLLELTIQGTPKSQTKA 312
+ ++ ++ +IP L+ L + Q +A
Sbjct: 357 QIQQ-VIDANIIPSLVYLLANAEFEIQKEA 385
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 99 (39.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 35/146 (23%), Positives = 61/146 (41%)
Query: 62 AAREIRRLTKTSQRCRR-------QLAQAVQPLVLMLRAPDSDHESALLALLNLAVKDEK 114
AA+E+R LT+ R ++ + V PL+ + E + LLN+++ D+
Sbjct: 189 AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDS 248
Query: 115 NKIKIVEAGALEPI-ISFLQSPDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEIL 173
NK + E + P+ I L+ + + NK I SG + L+++L
Sbjct: 249 NKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLL 308
Query: 174 RYGSQQAKFDAVMALSNLSTHPDNLS 199
G+ A D A+ L +N S
Sbjct: 309 EEGNPLAIKDVAAAIFTLCIAHENRS 334
Score = 78 (32.5 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 266 REHAVGALLMMCQSDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLR 320
+E+A+ L +C SDR K++E E + +L+ +GT ++Q KA +L LR
Sbjct: 397 KENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGTSRAQRKANGILDRLR 451
>ZFIN|ZDB-GENE-030616-533 [details] [associations]
symbol:ankar "ankyrin and armadillo repeat
containing" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR002110 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50088 PROSITE:PS50176 SMART:SM00185
SMART:SM00248 ZFIN:ZDB-GENE-030616-533 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:CT737230 CTD:150709 GeneTree:ENSGT00680000100065
IPI:IPI00758871 RefSeq:NP_001035135.2 UniGene:Dr.85578
Ensembl:ENSDART00000100342 GeneID:368636 KEGG:dre:368636
NextBio:20813084 ArrayExpress:F1QF11 Bgee:F1QF11 Uniprot:F1QF11
Length = 1400
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 63/283 (22%), Positives = 122/283 (43%)
Query: 50 LIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVLMLRA---PDSDHESALLALL 106
L+ SD ++ A + +T+ SQ C + P+++ L + P+ D A++ L
Sbjct: 749 LLCSDRQVVQCMATAVLCHMTENSQVCEELVHHGAVPILIKLLSVHQPELDSRCAVI-LA 807
Query: 107 NLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKPF----ISA 162
+LA ++++ I + G + +++ L S +LQ+ V P ++
Sbjct: 808 DLAAHSKQHQSLIADLGGVALVVNLLTS---DLQDVLVNGVRCIRTLCVRSPHNQTAVAH 864
Query: 163 SGAIPLLVEILRYGSQQAKFDAVMALSNLST-HPDNLSIILGTNPIPSIVDLLIFCKKSS 221
+G +P L++IL S + +A +AL+ LS H +N ++I + ++V L K S
Sbjct: 865 AGGVPHLIQILAVDSDTLQEEACLALAELSRGHRENQALICEAGAVGALVQALRHRKISV 924
Query: 222 KTAEKCTSLIESLVGFDEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDR 281
K K S +ESL + L RE GA+ + + +
Sbjct: 925 KV--KAASALESLASHNSAIQQCFLRQSAPKYLLQLLTVFQLDVREQ--GAIALWALAGQ 980
Query: 282 CKYREPILREGV-IPGLLELTIQGTPKSQ-TKARTLLQLLRDS 322
++ ++ E + +L+L + + K Q R ++ L RDS
Sbjct: 981 SLNQQKLMAEQMGYSVILDLLLSPSDKIQYVGCRAVIALSRDS 1023
>TAIR|locus:2055033 [details] [associations]
symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
"lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
Length = 930
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 79 QLAQAVQPLVLMLRAP-DSDHESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQS--- 134
Q A A++ LV + ++P + + A AL NL+ D+KN+ I AG +E +++ QS
Sbjct: 607 QEAGALEALVQLTKSPHEGVRQEAAGALWNLSF-DDKNRESISVAGGVEALVALAQSCSN 665
Query: 135 PDLNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTH 194
LQE N I G +P L+ + R ++ A AL NL+ +
Sbjct: 666 ASTGLQERAAGALWGLSVSEANSVAIGREGGVPPLIALARSEAEDVHETAAGALWNLAFN 725
Query: 195 PDNLSIILGTNPIPSIVDLLIFCKKS-SKTAEKCTSLIESLVGFDEGRI 242
P N I+ +P++V L C S SK A +L + + FD GR+
Sbjct: 726 PGNALRIVEEGGVPALVHL---CSSSVSKMARFMAALALAYM-FD-GRM 769
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 62/291 (21%), Positives = 119/291 (40%)
Query: 51 IQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA-VQPLVL--MLRAPDSDHESALLALLN 107
+ S + A E+R ++K R +A A P + + + S E+A LLN
Sbjct: 16 LSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYSSSHSSQENAAATLLN 75
Query: 108 LAVKDEKNKIKIVEAGALEPIISFLQSPDLN-----LQEYXXXXXXXXXXXXVNKPFISA 162
L++ + + G L+ + L+ D +Q +P I +
Sbjct: 76 LSITSREPLMS--SRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAEESYRPIIGS 133
Query: 163 SGAIPL-LVEILRYGSQQAKF--DAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKK 219
I L+ I+RY + D++ AL ++ +P N S ++ IP++ L++ K
Sbjct: 134 KRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALFSLIV---K 190
Query: 220 SSKTA--EKCTSLIESLVGFDEGRIVL--TSXXXXXXXXXXXXXNGSLQAREHAVGALLM 275
S+ E T+++ + G ++ + S SL+ +E++VGALL
Sbjct: 191 DSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGANVLADLLDPCTGSSLRIKENSVGALLN 250
Query: 276 MCQSDRCKYREPILR-------EGVIPGLLELTIQGTPKSQTKARTLLQLL 319
+ + R + EG + G++ + G+ K + KA LL+L+
Sbjct: 251 LARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSLKGRKKAVDLLKLV 301
>TAIR|locus:2204700 [details] [associations]
symbol:AT1G77460 "AT1G77460" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000008 InterPro:IPR008973 InterPro:IPR016024
Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SMART:SM00239 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 IPI:IPI00548388 RefSeq:NP_001185419.1
RefSeq:NP_177870.2 UniGene:At.34473 PRIDE:F4I718
EnsemblPlants:AT1G77460.1 EnsemblPlants:AT1G77460.2 GeneID:844082
KEGG:ath:AT1G77460 OMA:VAPSKEC Uniprot:F4I718
Length = 2136
Score = 113 (44.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 45/149 (30%), Positives = 68/149 (45%)
Query: 72 TSQRCRRQLAQAVQPLVLMLRAPDSDHESALLALLNLAVKDEKNKIKIVEA-GALEPI-- 128
+S C A+A + L+ ++ +D L+ L+ D K+ I EA G E I
Sbjct: 419 SSLSCYLDDAEAKRVLIALITMASADVRERLIICLSGLCHD---KVGIWEAIGKREGIQL 475
Query: 129 -ISFLQSPDLNLQEYXXXXXXXXXXXXVNKPF-ISASGAIPLLVEILRYGSQQAKFDAVM 186
ISFL QEY + + ++A+G IP LV++L GSQ+AK DA
Sbjct: 476 FISFLGLSSEQHQEYAVEMLKILTAQVDDSKWAVTAAGGIPPLVQLLETGSQKAKEDAAC 535
Query: 187 ALSNLSTHPDNL-SIILGTNPIPSIVDLL 214
L NL H + + + IP+ + LL
Sbjct: 536 ILWNLCCHSEEIRDCVERAGGIPAFLWLL 564
Score = 68 (29.0 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 260 NGSLQAREHAVGALLMMCQSDRCKYREPILREGVIPGLLELTIQGTPKSQTKA-RTLLQL 318
N S+++ E+AV AL + SD E L E V+ + G+P+ + A R L QL
Sbjct: 732 NSSIESAENAVSALANLL-SDPDIAAEA-LAEDVVSAFTRILADGSPEGKRNASRALHQL 789
Query: 319 LRDSP 323
L++ P
Sbjct: 790 LKNFP 794
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 61/267 (22%), Positives = 114/267 (42%)
Query: 65 EIRRLTKTSQRCRRQLAQA--VQPLVLMLRAP-DSDHESALLALLNLAVKDEKNKIKIVE 121
E+R L K+ R +A+A + LV L S +A+ +LNL++ E+NK +I+E
Sbjct: 390 ELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSIL-EQNKTRIME 448
Query: 122 A-GALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVN---KPFISASGAIPLLVEILRYGS 177
GAL +I L+S + V+ + + + LV++ + G
Sbjct: 449 TDGALNGVIEVLRS-GATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGP 507
Query: 178 QQAKFDAVMALSNLSTHPDNLSIILGTNPIPSIVDLLIFCKKSSKTAEKCTSLIESLVGF 237
+K DA++A+ NL +N+ + + + D + E+ +++E++V
Sbjct: 508 TSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAF------QELPEEAVAVVEAVVRR 561
Query: 238 DEGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDRCKYREPILREGVIPGL 297
G + +++ G+ RE A L+ MC+ E + IPG+
Sbjct: 562 G-GLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGS---ELVAEMAAIPGI 617
Query: 298 ----LELTIQGTPKSQTKARTLLQLLR 320
E+ GT + KA +L++ LR
Sbjct: 618 ERVIWEMIGAGTARGGRKAASLMRYLR 644
>UNIPROTKB|E1C8F9 [details] [associations]
symbol:E1C8F9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002553 InterPro:IPR016024
Pfam:PF00514 Pfam:PF01602 PROSITE:PS50176 SMART:SM00185
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00680000099702
OMA:LTNMAMQ InterPro:IPR026840 Pfam:PF14381 EMBL:AADN02000591
EMBL:AADN02000592 IPI:IPI00589277 Ensembl:ENSGALT00000012763
Uniprot:E1C8F9
Length = 876
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 45/167 (26%), Positives = 78/167 (46%)
Query: 43 AVHRALHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQA-VQPLVLMLRAPDSD---H 98
AV R LI +DP ++ A + + ++ ++ L + V +L P+ D H
Sbjct: 68 AVERLYKLISHEDPIVRRNAIM-VFGIMASNHDVKKLLRELDVTSSLLSHLVPEEDVIIH 126
Query: 99 ESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKP 158
E A L L ++AV + K++I E G LEP+IS L SPD ++ + ++
Sbjct: 127 EFATLCLAHMAV-EYTTKVQIFEQGGLEPLISLLGSPDPDVTKNSVECIYLLVQEFQSRA 185
Query: 159 FISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTN 205
+ IP L+++L+ + A+ L +S + + IILG N
Sbjct: 186 AVCELNVIPPLLDLLKSEYPVIQLLALKTLEVISKDRE-MRIILGEN 231
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 79 QLAQAVQPLVLMLRAP-DSDHESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPD- 136
Q A A++ LV + ++P + + A AL NLA D+KN+ I G +E +++ +S
Sbjct: 598 QEAGALEALVQLTQSPHEGVKQEAAGALWNLAF-DDKNRESIAAFGGVEALVALAKSSSN 656
Query: 137 --LNLQEYXXXXXXXXXXXXVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTH 194
LQE N I G IP L+ ++R ++ A AL NLS +
Sbjct: 657 ASTGLQERVAGALWGLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFN 716
Query: 195 PDNLSIILGTNPIPSIVDLLIFCKKS-SKTAEKCTSLIESLVGFDEGRI 242
P N I+ + ++V L C S SK A +L + + FD GR+
Sbjct: 717 PGNALRIVEEGGVVALVQL---CSSSVSKMARFMAALALAYM-FD-GRM 760
>TAIR|locus:2132238 [details] [associations]
symbol:MOS6 "MODIFIER OF SNC1, 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=IEA;ISS] [GO:0006952 "defense response"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
EMBL:AL161493 eggNOG:COG5064 GO:GO:0006606 EMBL:AF001308
HOGENOM:HOG000167616 EMBL:Y09511 EMBL:AF385693 EMBL:AY081725
IPI:IPI00521767 PIR:T01516 RefSeq:NP_192124.1 UniGene:At.5372
ProteinModelPortal:O04294 SMR:O04294 IntAct:O04294 STRING:O04294
PaxDb:O04294 PRIDE:O04294 EnsemblPlants:AT4G02150.1 GeneID:827472
KEGG:ath:AT4G02150 TAIR:At4g02150 InParanoid:O04294 OMA:NDENHAP
PhylomeDB:O04294 ProtClustDB:CLSN2916002 Genevestigator:O04294
GermOnline:AT4G02150 Uniprot:O04294
Length = 531
Score = 122 (48.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 42/177 (23%), Positives = 79/177 (44%)
Query: 44 VHRALHLIQSDD-PDLKLEAAREIRRLTK-TSQRCRRQLAQAVQPLVLMLRAPDSD--HE 99
V R + + DD P L+ EAA + + TS+ + P+ + L + S+ E
Sbjct: 120 VPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVRE 179
Query: 100 SALLALLNLAVKDEKNKIKIVEAGALEPIIS-FLQSPDLNLQEYXXXXXXXXXXXXVNKP 158
A+ AL N+A K + ++ GA+ P++S F ++ L++
Sbjct: 180 QAVWALGNVAGDSPKCRDLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPA 239
Query: 159 FISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLL 214
F A+P+L +++ ++ DA ALS LS + D + ++ +P ++ LL
Sbjct: 240 FEQTQPALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLL 296
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 286 EPILREGVIPGLLELTIQGTPKSQTKA-RTL 315
+ ++ GV+P L++L +P A RT+
Sbjct: 281 QAVIEAGVVPRLIQLLGHSSPSVLIPALRTI 311
>UNIPROTKB|J9P954 [details] [associations]
symbol:J9P954 "Importin subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085982 Ensembl:ENSCAFT00000027911 OMA:INANIIP
Uniprot:J9P954
Length = 529
Score = 118 (46.6 bits), Expect = 0.00050, P = 0.00050
Identities = 53/272 (19%), Positives = 116/272 (42%)
Query: 52 QSDDPDLKLEAAREIRRLTK-TSQRCRRQLAQAVQPLVLMLRAPDSDH--ESALLALLNL 108
++D ++ E+A + + TS++ + + P + L A H E A+ AL N+
Sbjct: 130 RTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASSHAHISEQAVWALGNI 189
Query: 109 AVKDEKNKIKIVEAGALEPIISFLQSPDLNLQE--YXXXXXXXXXXXXVNK----PFISA 162
A + +++ GA++P+++ L PD++ Y NK P +
Sbjct: 190 AGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLCNLTWTLSNLCRNKNPAPPLDAV 249
Query: 163 SGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLS-IILGTNPIPSIVDLLIFCKKSS 221
+P LV +L + + D A+S L+ P+ + +++ T +P +V LL +
Sbjct: 250 EQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERNEMVVKTGVVPQLVKLLGATELPI 309
Query: 222 KTAEKCTSLIESLVGFDEG-RIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSD 280
T ++ + G DE ++V+ + ++Q + + C+ D
Sbjct: 310 VTPA-LRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKANIQREATWTMSNITACRQD 368
Query: 281 RCKYREPILREGVIPGLLELTIQGTPKSQTKA 312
+ + ++ G++P L+ + + K+Q +A
Sbjct: 369 QI---QQVVNHGLVPFLVGVLSKADFKTQKEA 397
>POMBASE|SPBC1604.08c [details] [associations]
symbol:imp1 "importin alpha" species:4896
"Schizosaccharomyces pombe" [GO:0000087 "M phase of mitotic cell
cycle" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IDA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IMP]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 PomBase:SPBC1604.08c
GO:GO:0005525 GO:GO:0005829 SUPFAM:SSF48371 GO:GO:0005730
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0007067
GO:GO:0033554 GO:GO:0008565 EMBL:CU329671 GO:GO:0005643
GenomeReviews:CU329671_GR eggNOG:COG5064 GO:GO:0040023
GO:GO:0006607 GO:GO:0000087 HOGENOM:HOG000167616 HSSP:Q02821
OrthoDB:EOG408RH7 PIR:T39506 RefSeq:NP_596632.1
ProteinModelPortal:O94374 SMR:O94374 IntAct:O94374 STRING:O94374
PRIDE:O94374 EnsemblFungi:SPBC1604.08c.1 GeneID:2539928
KEGG:spo:SPBC1604.08c OMA:EMIANIQ NextBio:20801071 Uniprot:O94374
Length = 539
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 45/178 (25%), Positives = 84/178 (47%)
Query: 44 VHRALHLIQSDDPDLKLEAAREIRRLTK-TSQRCRRQL-AQAVQPLVLMLRAPDSD-HES 100
V R + ++S+ L+ EAA + + T+ + R + + AV + +L +P+ D E
Sbjct: 122 VDRFVQFLESEHHLLQFEAAWALTNIASGTTDQTRIVVDSGAVPRFIQLLSSPEKDVREQ 181
Query: 101 ALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSP--DLNLQEYXXXXXXXXXXXXVNKP 158
+ AL N+A + ++ G L+P+++ LQS D+++ P
Sbjct: 182 VVWALGNIAGDSSACRDYVLGNGVLQPLLNILQSSASDVSMLRNATWTLSNLCRGKNPPP 241
Query: 159 -FISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLL 214
+ + S A+P+L ++L + DA A+S LS P + + IL P +V+LL
Sbjct: 242 NWSTISVAVPILAKLLYSEDVEIIVDACWAISYLSDGPNEKIGAILDVGCAPRLVELL 299
>FB|FBgn0024889 [details] [associations]
symbol:Kap-alpha1 "karyopherin alpha1" species:7227
"Drosophila melanogaster" [GO:0006606 "protein import into nucleus"
evidence=ISS;NAS] [GO:0008320 "protein transmembrane transporter
activity" evidence=ISS;NAS] [GO:0005643 "nuclear pore"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 EMBL:AE014296 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606
GeneTree:ENSGT00610000085856 OMA:NDENHAP EMBL:AF074957
EMBL:BT083428 RefSeq:NP_524167.1 UniGene:Dm.29732 HSSP:P52292
SMR:O76521 IntAct:O76521 MINT:MINT-743368 STRING:O76521
EnsemblMetazoa:FBtr0074881 GeneID:40160 KEGG:dme:Dmel_CG8548
UCSC:CG8548-RA CTD:40160 FlyBase:FBgn0024889 InParanoid:O76521
OrthoDB:EOG4BVQ8S GenomeRNAi:40160 NextBio:817323 Uniprot:O76521
Length = 543
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 50 LIQSDDPDLKLEAAREIRRLTK-TSQRCRRQLAQAVQPLVL-MLRAPDSD-HESALLALL 106
L S + L+ EAA + + TSQ+ + + P+ + +L +P D E A+ AL
Sbjct: 146 LRNSANATLQFEAAWTLTNIASGTSQQTKVVIEAGAVPIFIDLLSSPHDDVQEQAVWALG 205
Query: 107 NLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNKP--FISASG 164
N+A + ++ +G LEP++ L + D + P F S
Sbjct: 206 NIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFAKISH 265
Query: 165 AIPLLVEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLLIFCKKSSKT 223
+P+L +L+Y D A+ LS P D + ++ +V+LL+ +++ T
Sbjct: 266 GLPILARLLKYTDADVLSDTCWAIGYLSDGPNDKIQAVIDAGVCRRLVELLLHPQQNVST 325
Query: 224 A 224
A
Sbjct: 326 A 326
>ZFIN|ZDB-GENE-040426-2023 [details] [associations]
symbol:kpna7 "karyopherin alpha 7 (importin alpha
8)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
ZFIN:ZDB-GENE-040426-2023 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
eggNOG:COG5064 GO:GO:0006606 HOGENOM:HOG000167616
HOVERGEN:HBG001846 CTD:402569 OrthoDB:EOG41VK2V HSSP:P52293
EMBL:BC044523 IPI:IPI00508353 RefSeq:NP_998235.1 UniGene:Dr.20877
ProteinModelPortal:Q803D8 SMR:Q803D8 STRING:Q803D8 PRIDE:Q803D8
GeneID:406343 KEGG:dre:406343 InParanoid:Q803D8 NextBio:20817963
ArrayExpress:Q803D8 Bgee:Q803D8 Uniprot:Q803D8
Length = 520
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 59/271 (21%), Positives = 121/271 (44%)
Query: 52 QSDDPDLKLEAAREIRRLTKTSQRCRRQLAQ--AVQPLVLMLRAPDSD-HESALLALLNL 108
++DDP L+ EAA + + + +Q+ + AV + +L +P + E A+ AL N+
Sbjct: 127 RNDDPTLQFEAAWSLTNVASGTSWHTQQVVEHGAVPAFIALLASPMLNISEQAVWALGNI 186
Query: 109 AVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYXXXXXXXXXXXXVNK-PFISASGA-- 165
A + +++ G + +++ L +PD + Y NK PF S
Sbjct: 187 AGDGSSYRDALIDCGVIPALLARL-TPDAPVG-YLRNLTWTLSNLCRNKNPFPRFSAVQQ 244
Query: 166 -IPLLVEILRYGSQQAKFDAVMALSNLSTHP-DNLSIILGTNPIPSIVDLLIFCKKSSKT 223
+P ++++L + + DA A+S L+ P + + +I+ + +V+LL F + + T
Sbjct: 245 MLPSIIQLLHHSDKSILSDACWAISYLTDGPNERIDVIIKAGILTRLVELLGFEELAVVT 304
Query: 224 AEKCTSLIESLV-GFD-EGRIVLTSXXXXXXXXXXXXXNGSLQAREHAVGALLMMCQSDR 281
IE++V G D + + + + S+Q + A A+ +
Sbjct: 305 P--ALRSIENIVSGSDLQTQAAIDAGVLSALPKLMRHQKSSVQ--KEAAWAVSNIAAGP- 359
Query: 282 CKYREPILREGVIPGLLELTIQGTPKSQTKA 312
C+ + ++ G+ L++L G K+Q +A
Sbjct: 360 CQQIQQLITCGLSAPLVDLLRNGDFKTQREA 390
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.360 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 397 355 0.00080 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 577 (61 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:06
No. of threads or processors used: 24
Search cpu time: 27.12u 0.07s 27.19t Elapsed: 00:00:15
Total cpu time: 27.14u 0.07s 27.21t Elapsed: 00:00:21
Start: Fri May 10 02:01:22 2013 End: Fri May 10 02:01:43 2013