Query 015989
Match_columns 397
No_of_seqs 277 out of 1920
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 02:46:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015989hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 2.3E-63 5E-68 473.5 24.5 331 1-333 17-389 (390)
2 KOG0698 Serine/threonine prote 100.0 1.3E-47 2.8E-52 373.1 26.7 253 51-360 46-308 (330)
3 KOG0697 Protein phosphatase 1B 100.0 5.3E-48 1.2E-52 348.3 21.9 257 47-357 23-292 (379)
4 PLN03145 Protein phosphatase 2 100.0 8.5E-47 1.8E-51 369.5 26.6 252 52-358 72-332 (365)
5 PTZ00224 protein phosphatase 2 100.0 5.5E-44 1.2E-48 350.8 26.3 243 48-359 25-274 (381)
6 PF00481 PP2C: Protein phospha 100.0 3.4E-45 7.3E-50 344.9 16.7 235 52-322 7-249 (254)
7 KOG0699 Serine/threonine prote 100.0 7.6E-42 1.6E-46 318.2 17.6 174 146-359 328-506 (542)
8 COG0631 PTC1 Serine/threonine 100.0 1.9E-40 4.1E-45 312.9 20.3 230 56-359 20-255 (262)
9 cd00143 PP2Cc Serine/threonine 100.0 7.3E-35 1.6E-39 272.9 24.3 238 52-355 8-254 (254)
10 PRK14559 putative protein seri 100.0 4.4E-35 9.6E-40 302.9 22.5 244 50-358 380-637 (645)
11 smart00332 PP2Cc Serine/threon 100.0 7.3E-34 1.6E-38 266.8 23.0 234 53-353 14-255 (255)
12 KOG1323 Serine/threonine phosp 100.0 1.2E-29 2.7E-34 234.6 21.6 252 73-358 138-489 (493)
13 KOG1379 Serine/threonine prote 99.9 1.3E-23 2.7E-28 195.1 19.5 222 57-355 89-330 (330)
14 KOG0618 Serine/threonine phosp 99.8 3E-20 6.5E-25 192.7 17.2 216 79-360 551-776 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 8E-18 1.7E-22 154.0 13.5 181 53-305 6-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 4E-16 8.7E-21 140.6 17.1 158 78-318 29-191 (193)
17 TIGR02865 spore_II_E stage II 99.5 1.5E-12 3.3E-17 139.7 19.3 190 56-355 564-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.4 4.3E-11 9.4E-16 107.5 18.3 179 78-356 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.2 0.00016 3.5E-09 71.8 18.5 180 78-356 174-366 (367)
20 PF09436 DUF2016: Domain of un 40.5 16 0.00034 27.3 1.2 20 277-297 26-45 (72)
21 COG2168 DsrH Uncharacterized c 23.2 67 0.0014 25.4 2.1 34 272-306 19-52 (96)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-63 Score=473.50 Aligned_cols=331 Identities=50% Similarity=0.818 Sum_probs=296.2
Q ss_pred ChHHHHHHHHhccCcCcccccCc--CCCcC-CCCCceeEeecCCCccccceeeeeeccCCcCcchhhcccCCCCCCCC-C
Q 015989 1 MLSRLMNFLRACWRPSSDRYVHT--SADTA-GRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLES-G 76 (397)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ED~~~v~~~~~~~~~~-~ 76 (397)
|++.++++.+.||+|........ +++.. .+.+++.|+++...+..|+++++..+.++.++|..-++.+....... +
T Consensus 17 ~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~ 96 (390)
T KOG0700|consen 17 MKSTPMRLKRSCLRPIRRGESSSRSGSDSSGNSVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEE 96 (390)
T ss_pred hccccchhhhhccCCCccccccccccccCCCCCcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeecc
Confidence 67889999999999988764432 23333 37899999999999999999999999988778877665555443333 6
Q ss_pred CceEEEEEecCCChhHHHHHHHHHHHHHHHH------------hhhh--------------------c-ccchHHHHHHH
Q 015989 77 PYGTFIGIYDGHGGPETSRYINDHLFQHLKR------------FTSE--------------------Q-QSMSVDVIKKA 123 (397)
Q Consensus 77 ~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~------------~~~~--------------------~-~~~~~~~l~~a 123 (397)
+++.|+||||||||.++++|++++|+.++.. +..+ . .....++|.+|
T Consensus 97 ~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~A 176 (390)
T KOG0700|consen 97 NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKA 176 (390)
T ss_pred CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHH
Confidence 7889999999999999999999999999883 2222 1 35678899999
Q ss_pred HHHHHHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHH
Q 015989 124 YQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE 203 (397)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~r 203 (397)
|.+++++|.+.+.+.+...|++..+||||+|+++.++.|||||+|||||+|++..+..+...++|||.||+.+++.|++|
T Consensus 177 f~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~R 256 (390)
T KOG0700|consen 177 FEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRR 256 (390)
T ss_pred HHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998754444469999999999999999999
Q ss_pred HHhcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEE
Q 015989 204 MHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLI 283 (397)
Q Consensus 204 i~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLI 283 (397)
|+..||+++.+++.++ |||+|.|++||||||.+||++.++.+|++..|.+|.++++||++++|+|+.++|.+.|+|||
T Consensus 257 ir~eHPdd~~~vv~~~--~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLI 334 (390)
T KOG0700|consen 257 IRSEHPDDPHIVVNKH--WRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLI 334 (390)
T ss_pred HHHhCCCCcceEeecc--ceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEE
Confidence 9999999999999887 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHhhhhhhhhh
Q 015989 284 FASDGLWEHLSNQDAVDIVQN-----HPHSGSARRLVKAALQEAAKKREMRYSDL 333 (397)
Q Consensus 284 LaSDGlwd~ls~~ei~~iv~~-----~~~~~~a~~Lv~~Al~~~a~~~~~~~~~l 333 (397)
||||||||+|++||++++|.. .+.+++|++||+.|+..++++++|+|++|
T Consensus 335 lASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aakk~~~r~s~l 389 (390)
T KOG0700|consen 335 LASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAAKKRGMRLSDL 389 (390)
T ss_pred EeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhhhhccccHhhc
Confidence 999999999999999999998 67789999999999999999999988765
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-47 Score=373.14 Aligned_cols=253 Identities=35% Similarity=0.539 Sum_probs=206.5
Q ss_pred eeeccCCcCcchhhcccCCCCCCCCCC-ceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhccc--chHHHHHHHHH-H
Q 015989 51 AVVQANNLLEDQSQIESGPLSTLESGP-YGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQS--MSVDVIKKAYQ-A 126 (397)
Q Consensus 51 ~~~~~~~~~ED~~~v~~~~~~~~~~~~-~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~--~~~~~l~~a~~-~ 126 (397)
...+.+..|||++.............. ...||||||||||+.+|+|+.++|+..+.+....... ...++++++|. .
T Consensus 46 ~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~F~~~ 125 (330)
T KOG0698|consen 46 SIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRAFLTK 125 (330)
T ss_pred ecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHH
Confidence 444456789999977544332222233 5799999999999999999999999999886665543 47899999999 6
Q ss_pred HHHHHHHHHhhhCCCCCCcccccceEEEEEEeCC-eEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHH
Q 015989 127 TEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCG-TLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMH 205 (397)
Q Consensus 127 ~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~-~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~ 205 (397)
++.++.+. ..+...+|||++++++.++ +|||||+|||||||++. + +.+++||.||+|..+.|+.||+
T Consensus 126 ~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~----~-~~a~~Ls~DHkP~~~~E~~RI~ 193 (330)
T KOG0698|consen 126 TDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRK----G-GVAVQLSVDHKPDREDERERIE 193 (330)
T ss_pred HHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecC----C-CeeeeCCCCCCCCcHHHHHHHH
Confidence 99998865 1113568888888888855 99999999999999986 1 3899999999999999999999
Q ss_pred hcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEE
Q 015989 206 SMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFA 285 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILa 285 (397)
+.| +.+....+.|||+|.|+|||||||..+|. ++|+++|++....+.+.|+|||||
T Consensus 194 ~~G----G~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------------------~~v~a~Pei~~~~~~~~deFLiLa 249 (330)
T KOG0698|consen 194 AAG----GRVSNWGGVWRVNGVLAVSRAFGDVELKS--------------------QGVIAEPEIQQVKINSDDEFLILA 249 (330)
T ss_pred HcC----CEEEEcCCcceEeceEEEeeecCCHHhcC--------------------CcEecCCceEEEEcCCCCcEEEEe
Confidence 987 56666666899999999999999999885 348999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCccc
Q 015989 286 SDGLWEHLSNQDAVDIVQNH-----PHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLV 360 (397)
Q Consensus 286 SDGlwd~ls~~ei~~iv~~~-----~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~~ 360 (397)
||||||+|++||++++|+.. .+..++..|...|+ .|++.||||||||.|.+...
T Consensus 250 sDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~---------------------~~~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 250 SDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEAL---------------------SRGSKDNITVVVVRLKSSPK 308 (330)
T ss_pred CCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHh---------------------hcCCCCCeEEEEEEecCccc
Confidence 99999999999999999984 23344455555444 35589999999999988743
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-48 Score=348.32 Aligned_cols=257 Identities=21% Similarity=0.368 Sum_probs=215.6
Q ss_pred ceeeeeeccCC-cCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcc-------cchHH
Q 015989 47 EFSMAVVQANN-LLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQ-------SMSVD 118 (397)
Q Consensus 47 ~~s~~~~~~~~-~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~-------~~~~~ 118 (397)
+|.++.+|+|+ .|||++....+.. ++-++++||+|||||.|+.+|.+++++|...+...-.... ...+.
T Consensus 23 ryg~SSMQGWR~eMEDah~A~~~l~---~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~ 99 (379)
T KOG0697|consen 23 RYGVSSMQGWRVEMEDAHTAVAGLP---SPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEK 99 (379)
T ss_pred eeeeccccchhhhhhhhhhhhhcCC---CCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHh
Confidence 47888889886 8999997754332 4556799999999999999999999999998865322111 25677
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCH
Q 015989 119 VIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIE 198 (397)
Q Consensus 119 ~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~ 198 (397)
-|+..|.++|+-+........ ....+||||+.+++...++|++|+||||++++|+ +.++.-|+||+|.++
T Consensus 100 GIrtGFL~iDE~mr~~~~~~~----~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rn------g~~~f~TqDHKP~~p 169 (379)
T KOG0697|consen 100 GIRTGFLSIDEIMRTLSDISK----GSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRN------GEVVFSTQDHKPYLP 169 (379)
T ss_pred hHhhcceeHHHHHhhhhhhhc----ccccCCceEEEEEecCceEEEEecCcchhheecC------CceEEeccCCCCCCh
Confidence 899999999998776654322 2245999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHhcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCC
Q 015989 199 SVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPF 278 (397)
Q Consensus 199 ~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~ 278 (397)
.|++||+.+| +.+..+ ||+|.|++||||||.+||..+ ..++.+|+|+++|+|....-...
T Consensus 170 ~EkeRIqnAG----GSVMIq----RvNGsLAVSRAlGDydyK~v~------------~kgp~eQlVSPEPev~~~~R~ee 229 (379)
T KOG0697|consen 170 KEKERIQNAG----GSVMIQ----RVNGSLAVSRALGDYDYKNVP------------GKGPTEQLVSPEPEVYIIERSEE 229 (379)
T ss_pred HHHHHHhcCC----CeEEEE----EecceeeeehhccCcccccCC------------CCCchhcccCCCCceEEeecccc
Confidence 9999999887 444444 999999999999999999764 34567899999999999999999
Q ss_pred CeEEEEEcCCCCCCCCHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEE
Q 015989 279 DQFLIFASDGLWEHLSNQDAVDIVQNH-----PHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVV 353 (397)
Q Consensus 279 D~fLILaSDGlwd~ls~~ei~~iv~~~-----~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv 353 (397)
|+||||||||+||+|+++|++++|+.. +....+..+++..|-++ ++||+|+|+|
T Consensus 230 deFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKG---------------------SRDNMsivlv 288 (379)
T KOG0697|consen 230 DEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKG---------------------SRDNMSIVLV 288 (379)
T ss_pred CcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhcc---------------------CccCceEEEE
Confidence 999999999999999999999999985 34567777777776655 8999999999
Q ss_pred EcCC
Q 015989 354 FLDS 357 (397)
Q Consensus 354 ~l~~ 357 (397)
-|..
T Consensus 289 cfp~ 292 (379)
T KOG0697|consen 289 CFPG 292 (379)
T ss_pred ecCC
Confidence 9864
No 4
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=8.5e-47 Score=369.51 Aligned_cols=252 Identities=26% Similarity=0.381 Sum_probs=198.7
Q ss_pred eeccCCcCcchhhcccCCCCC----CCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHH
Q 015989 52 VVQANNLLEDQSQIESGPLST----LESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQAT 127 (397)
Q Consensus 52 ~~~~~~~~ED~~~v~~~~~~~----~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~ 127 (397)
..+.|..|||++++..+.... ........||||||||||+.+|++|+++|++.+.+.... ...+.++|.++|..+
T Consensus 72 ~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~-~~~~~~al~~af~~~ 150 (365)
T PLN03145 72 DIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF-PREIEKVVSSAFLQT 150 (365)
T ss_pred cccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHH
Confidence 344588999998763321100 011223589999999999999999999999998763221 234578899999999
Q ss_pred HHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhc
Q 015989 128 EDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSM 207 (397)
Q Consensus 128 ~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~ 207 (397)
+++|.+.... . ....+|||+++++|.++++|||||||||+|+++. +++++||+||++.++.|+.||.+.
T Consensus 151 d~~~~~~~~~----~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~------g~~~~LT~DH~~~~~~E~~RI~~~ 219 (365)
T PLN03145 151 DTAFAEACSL----D-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRR------GKAIEMSRDHKPMCSKERKRIEAS 219 (365)
T ss_pred hHHHHhhhcc----c-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcC------CeEEEecCCCCCCCHHHHHHHHHc
Confidence 9998764321 1 1234999999999999999999999999999997 789999999999999999999887
Q ss_pred CCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcC
Q 015989 208 HPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASD 287 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSD 287 (397)
++ .+ .. .|++|.+++||||||..+|.... ...+.++++|++..++++++|.|||||||
T Consensus 220 Gg----~v-~~---g~v~g~l~vTRalGD~~~k~~k~--------------~~~~~vs~ePdv~~~~l~~~D~fLILaSD 277 (365)
T PLN03145 220 GG----YV-YD---GYLNGQLNVARALGDWHMEGMKG--------------SDGGPLSAEPELMTTQLTEEDEFLIIGCD 277 (365)
T ss_pred CC----ce-ec---ceECCcccccccccccccccccc--------------ccCCCcceEEEEEEEECCCCCEEEEEeCC
Confidence 63 22 22 28899999999999998874320 01123689999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCc
Q 015989 288 GLWEHLSNQDAVDIVQN-----HPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSH 358 (397)
Q Consensus 288 Glwd~ls~~ei~~iv~~-----~~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~ 358 (397)
||||+|+++++++++.. ..++.+|+.|++.|++.+ +.||||||||+|+..
T Consensus 278 GLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rg---------------------s~DNITvIVV~l~~~ 332 (365)
T PLN03145 278 GIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKRK---------------------SGDNLAVVVVCFQSQ 332 (365)
T ss_pred ccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC---------------------CCCCEEEEEEEeecC
Confidence 99999999999887754 245678889999887643 799999999999974
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=5.5e-44 Score=350.82 Aligned_cols=243 Identities=24% Similarity=0.322 Sum_probs=194.3
Q ss_pred eeeeeeccCCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHH
Q 015989 48 FSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQAT 127 (397)
Q Consensus 48 ~s~~~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~ 127 (397)
.+.+..+.|+.|||++.+.. .++..||||||||||..+|++++++|...+.+.. .....+.|+++|..+
T Consensus 25 g~~s~~G~R~~nED~~~v~~--------~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~---~~~~~~~l~~a~~~~ 93 (381)
T PTZ00224 25 ASACVNGYRESMEDAHLLYL--------TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEP---EPMTDERMEELCLEI 93 (381)
T ss_pred EEEeCCCCCCCCCCeeEecc--------CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc---ccccHHHHHHHHHHH
Confidence 34444555788999987621 1244799999999999999999999988775422 122356799999999
Q ss_pred HHHHHHHHhhhCCCCCCcccccceEEEEEEe-CCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHh
Q 015989 128 EDGFFSLVTKQWPMKPQIAAVGSCCLVGVIS-CGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHS 206 (397)
Q Consensus 128 ~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~-~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~ 206 (397)
|+++.+.. ..+|||+++++|. ++++|||||||||+|+++. +++++||+||++.++.|+.||..
T Consensus 94 d~~i~~~~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~------g~~~~LT~DH~~~~~~E~~RI~~ 157 (381)
T PTZ00224 94 DEEWMDSG----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRD------GKLVFATEDHKPNNPGERQRIEA 157 (381)
T ss_pred HHHHHhcc----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEEC------CEEEEcccCCCCCCHHHHhHHHH
Confidence 99887532 2369999988876 5799999999999999997 78999999999999999999987
Q ss_pred cCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEc
Q 015989 207 MHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFAS 286 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaS 286 (397)
.+. . +.. .|++|.+++||||||..+|..+. .+..++.|+++|++..+++.++| ||||||
T Consensus 158 ~gg----~-v~~---~Rv~G~l~vTRalGd~~~K~~~~------------~~~~~~~v~~~Pdi~~~~l~~~D-~llLaS 216 (381)
T PTZ00224 158 CGG----R-VVS---NRVDGDLAVSRAFGDRSFKVKGT------------GDYLEQKVIAVPDVTHLTCQSND-FIILAC 216 (381)
T ss_pred ccC----E-ecc---ccccCceeeecccCCcccccccc------------cccccCcceeeeEEEEEECCCCC-EEEEEC
Confidence 652 2 222 38999999999999999887641 12234568899999999999887 799999
Q ss_pred CCCCC-CCCHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCcc
Q 015989 287 DGLWE-HLSNQDAVDIVQN-----HPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 359 (397)
Q Consensus 287 DGlwd-~ls~~ei~~iv~~-----~~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~ 359 (397)
||||| +++++|+++++.+ .+++.+|+.|++.|+..+ +.||||||||+|....
T Consensus 217 DGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rG---------------------s~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 217 DGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRRG---------------------SKDNISCLIVQLKDGA 274 (381)
T ss_pred CCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcC---------------------CCCCEEEEEEEeeCCC
Confidence 99999 8999999999974 245678899999887644 7999999999998653
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=3.4e-45 Score=344.92 Aligned_cols=235 Identities=34% Similarity=0.492 Sum_probs=185.2
Q ss_pred eeccCCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhccc-chHHHHHHHHHH-HHH
Q 015989 52 VVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQS-MSVDVIKKAYQA-TED 129 (397)
Q Consensus 52 ~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~-~~~~~l~~a~~~-~~~ 129 (397)
..+.|..|||.+++...... .....+..+|||||||||..+++++++.++..+.+....... ...++|..+|.. +++
T Consensus 7 ~~g~r~~~eD~~~~~~~~~~-~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~~~~~ 85 (254)
T PF00481_consen 7 MQGVRKEMEDRHLIIQNFNS-NSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLAFTDE 85 (254)
T ss_dssp EECTSSSHHEEEEEEEEETC-CTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCEEEEecCccc-cCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeeecccc
Confidence 34456799999988432211 134556799999999999999999999999888876655544 678999999999 888
Q ss_pred HHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEE-EEccCCCCCCCHHHHHHHHhcC
Q 015989 130 GFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLA-IQLSSEHNVGIESVRQEMHSMH 208 (397)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~-~~LT~DH~~~~~~e~~ri~~~~ 208 (397)
.+.+..... ....+||||++++|.++++|+|||||||+|+++. ... ++||+||+|.++.|+.||++.|
T Consensus 86 ~~~~~~~~~-----~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~------~~~~~~Lt~dH~~~~~~E~~RI~~~g 154 (254)
T PF00481_consen 86 SLYSDSENN-----ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRN------GGIIKQLTRDHKPSNPDERERIRKAG 154 (254)
T ss_dssp HHHHHHHHH-----THTTSEEEEEEEEEETTEEEEEEESS-EEEEEET------TEEEEESS---STTSHHHHHHHHHTT
T ss_pred ccccccccc-----ccccccccccccccccceeEEEeeeeeeeeeeec------cccccccccccccchhhccceeeccc
Confidence 887633210 1266999999999999999999999999999997 444 4999999999999999999987
Q ss_pred CCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCC
Q 015989 209 PDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDG 288 (397)
Q Consensus 209 ~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDG 288 (397)
+ .+.. .+|+.|.|++||||||..+|..+ +++|+++|+|..++++++|.||||||||
T Consensus 155 g----~v~~---~~rv~g~l~~sRalGd~~~k~~~-----------------~~~v~~~P~i~~~~l~~~d~flvlaSDG 210 (254)
T PF00481_consen 155 G----RVSE---NGRVNGVLAVSRALGDFDLKPPG-----------------KPGVIAEPDISEVDLTPDDEFLVLASDG 210 (254)
T ss_dssp -----GEEE---TEEETTTBSSSB-EE-GGGTTCT-----------------SSSSB---EEEEEEEBTTEEEEEEE-HH
T ss_pred c----cccc---chhhhhccccccccccccccccc-----------------cceeeeecccccccccccceEEEEEccc
Confidence 4 2232 46999999999999999988632 3569999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCC-----CchHHHHHHHHHHHHH
Q 015989 289 LWEHLSNQDAVDIVQNHP-----HSGSARRLVKAALQEA 322 (397)
Q Consensus 289 lwd~ls~~ei~~iv~~~~-----~~~~a~~Lv~~Al~~~ 322 (397)
|||+|+++|+++++++.. ++.+|++|++.|+..+
T Consensus 211 lwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~g 249 (254)
T PF00481_consen 211 LWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARG 249 (254)
T ss_dssp HHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTT
T ss_pred ccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Confidence 999999999999998852 5778999999988765
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-42 Score=318.24 Aligned_cols=174 Identities=30% Similarity=0.463 Sum_probs=147.1
Q ss_pred ccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeeeec
Q 015989 146 AAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVK 225 (397)
Q Consensus 146 ~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~ 225 (397)
..+|||++|+++.+++|||||.||||||++|+ ++++.||.||+|.++.|..||.++|+ .+.+.. ||+
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~------GkAvdmS~DHKPEDevE~~RI~~AGG----~vtlDG---RVN 394 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRN------GKAVDMSVDHKPEDEVETNRIHAAGG----QVTLDG---RVN 394 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecC------CceeecccCCCcccHHHHHHHHhcCC----eEeecc---eec
Confidence 34899999999999999999999999999998 99999999999999999999999873 344432 999
Q ss_pred CccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCCCCCCCHHHHHHHHHcC
Q 015989 226 GLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH 305 (397)
Q Consensus 226 G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~~ 305 (397)
|.|++||||||..||+.. ..|+++++|++-|+|....|++.|+|+||||||||++|+.|+++++|+..
T Consensus 395 GGLNLSRA~GDHaYK~N~------------~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~ 462 (542)
T KOG0699|consen 395 GGLNLSRAFGDHAYKKNQ------------ELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDL 462 (542)
T ss_pred Cccchhhhhhhhhhhccc------------CCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHH
Confidence 999999999999999753 35678999999999999999999999999999999999999999999874
Q ss_pred C-----CchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCcc
Q 015989 306 P-----HSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 359 (397)
Q Consensus 306 ~-----~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~ 359 (397)
. ...+++.|+...|+-.-. -.+-+.||+|||++.|+++.
T Consensus 463 l~~n~~ls~iceeL~D~CLAp~T~---------------GDGTGCDNMT~ii~~Fkrk~ 506 (542)
T KOG0699|consen 463 LAKNSSLSEICEELCDACLAPSTD---------------GDGTGCDNMTVIITTFKRKS 506 (542)
T ss_pred HhcCchHHHHHHHHHHhhcCCCCC---------------CCCcCCCcceEEEEEeccch
Confidence 2 244566666665542210 11226899999999998754
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=312.87 Aligned_cols=230 Identities=26% Similarity=0.369 Sum_probs=188.9
Q ss_pred CCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhccc---c--hHHHHHHHHHHHHHH
Q 015989 56 NNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQS---M--SVDVIKKAYQATEDG 130 (397)
Q Consensus 56 ~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~---~--~~~~l~~a~~~~~~~ 130 (397)
|..|||++.+... ..... ..||+|||||||++++++|++.+++.|.+.+.+... . ..+.|.+++..++++
T Consensus 20 R~~NeD~~~~~~~----~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~ 94 (262)
T COG0631 20 RKHNEDAFLIKPN----ENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKANEA 94 (262)
T ss_pred cCCCCcceeeccc----cCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHH
Confidence 4478999988431 11222 579999999999999999999999999887655431 1 578999999999999
Q ss_pred HHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCCC
Q 015989 131 FFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPD 210 (397)
Q Consensus 131 l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~~ 210 (397)
+..... .......+|||++++++.++++|+|||||||+|++++ +.+++||.||++.++.++.|+....+.
T Consensus 95 i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~------~~~~~lT~DH~~~~~~~~~~~~~~~~~ 164 (262)
T COG0631 95 IAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRD------GELKQLTEDHSLVNRLEQRGIITPEEA 164 (262)
T ss_pred HHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcC------CceEEeccCCcHHHHHHHhcCCCHHHH
Confidence 988653 2334578999999999999999999999999999998 799999999999999988876443211
Q ss_pred CCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCCC
Q 015989 211 DSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLW 290 (397)
Q Consensus 211 ~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGlw 290 (397)
. ... |.+ ++|||||+.. ..+|++...+++++ +|+||||||||
T Consensus 165 ~--~~~------~~~---~ltralG~~~--------------------------~~~p~~~~~~~~~~-d~llL~SDGl~ 206 (262)
T COG0631 165 R--SHP------RRN---ALTRALGDFD--------------------------LLEPDITELELEPG-DFLLLCSDGLW 206 (262)
T ss_pred H--hCc------cch---hhhhhcCCCc--------------------------ccceeEEEEEcCCC-CEEEEECCCCc
Confidence 1 111 222 7999999985 37899999999999 57999999999
Q ss_pred CCCCHHHHHHHHHc-CCCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCcc
Q 015989 291 EHLSNQDAVDIVQN-HPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 359 (397)
Q Consensus 291 d~ls~~ei~~iv~~-~~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~ 359 (397)
|.+++++++++++. ..++.++.+|++.|++.+ +.||||+++|.+....
T Consensus 207 d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~g---------------------~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 207 DVVSDDEIVDILKNSETPQEAADKLIELALEGG---------------------GPDNITVVLVRLNGEG 255 (262)
T ss_pred cCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhcC---------------------CCCceEEEEEEeeccc
Confidence 99999999999995 677899999999998744 7999999999998764
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=7.3e-35 Score=272.94 Aligned_cols=238 Identities=35% Similarity=0.514 Sum_probs=191.2
Q ss_pred eeccCCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhc----ccchHHHHHHHHHHH
Q 015989 52 VVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQ----QSMSVDVIKKAYQAT 127 (397)
Q Consensus 52 ~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~~~~ 127 (397)
..+.|..|||++.+..... ..+..+|+|||||||+..++++++.+...+.+..... ...+...|+++|..+
T Consensus 8 ~~g~r~~neD~~~~~~~~~-----~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (254)
T cd00143 8 KGGDRKTNEDAVVIKPNLN-----NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRA 82 (254)
T ss_pred CCCCCCCCcceEEEeccCC-----CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Confidence 3344567899988732110 0246899999999999999999999999998876554 345667899999999
Q ss_pred HHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhc
Q 015989 128 EDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSM 207 (397)
Q Consensus 128 ~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~ 207 (397)
++.+....... .....+|||++++++.+++++++|+||||+|++++ +.++++|.||++.++.++.|+...
T Consensus 83 ~~~l~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~------~~~~~lt~dh~~~~~~~~~~i~~~ 152 (254)
T cd00143 83 DEEILEEAQDE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRN------GEAVQLTKDHKPVNEEERERIEKA 152 (254)
T ss_pred HHHHHHhhhhc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcC------CceeEcCCCCCCcChHHHHHHHHc
Confidence 99987765431 23366899999999999999999999999999998 689999999999998888988876
Q ss_pred CCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEc-cCCCeEEEEEc
Q 015989 208 HPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHEL-QPFDQFLIFAS 286 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l-~~~D~fLILaS 286 (397)
++... ..+.++...+||+||+..+|. .+..+|++..+.+ +++| +|||||
T Consensus 153 ~~~~~--------~~~~~~~~~~t~~lG~~~~~~---------------------~~~~~~~~~~~~l~~~~d-~ill~S 202 (254)
T cd00143 153 GGRVS--------NGRVPGVLAVTRALGDFDLKP---------------------GVSAEPDVTVVKLTEDDD-FLILAS 202 (254)
T ss_pred CCcEE--------eCEEcCceeeccccCCccccC---------------------CEEcCCeEEEEEeCCCCc-EEEEEC
Confidence 53211 124556668999999997662 3588999999999 7766 588899
Q ss_pred CCCCCCCCHHHHHHHHHcCC----CchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEc
Q 015989 287 DGLWEHLSNQDAVDIVQNHP----HSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFL 355 (397)
Q Consensus 287 DGlwd~ls~~ei~~iv~~~~----~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l 355 (397)
|||||+++++++.+++.... ++.+|++|++.|...+ +.||+|+||++|
T Consensus 203 DG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~~---------------------~~Dn~t~i~~~~ 254 (254)
T cd00143 203 DGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRG---------------------SHDNITVVVVRL 254 (254)
T ss_pred CCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhCC---------------------CCCCEEEEEEeC
Confidence 99999999999999998754 6788888888887644 689999999975
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=4.4e-35 Score=302.90 Aligned_cols=244 Identities=19% Similarity=0.246 Sum_probs=170.2
Q ss_pred eeeec-cCCcCcchhhcccCCCCCC-CC---CCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcc---cchHHHHH
Q 015989 50 MAVVQ-ANNLLEDQSQIESGPLSTL-ES---GPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQ---SMSVDVIK 121 (397)
Q Consensus 50 ~~~~~-~~~~~ED~~~v~~~~~~~~-~~---~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~---~~~~~~l~ 121 (397)
.+..+ .|+.|||++.+........ .. .....+|+|||||||+.+++.|++.+.+.|.+++.+.. ....+.|+
T Consensus 380 ~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~L~ 459 (645)
T PRK14559 380 RTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEETIR 459 (645)
T ss_pred ECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence 33444 3778999886632110000 00 11346899999999998777777776666655443211 12467899
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHH
Q 015989 122 KAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVR 201 (397)
Q Consensus 122 ~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~ 201 (397)
++|..+++.+.+...+.. ......+|||++++++.++++|++||||||+|+++. ++++++||+||++.+...+
T Consensus 460 ~ai~~AN~~I~~~~~~~~--~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r-----~g~l~QLT~DHs~~~~lv~ 532 (645)
T PRK14559 460 EAIYLANEAIYDLNQQNA--RSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTR-----KGGLEQLTVDHEVGQREIQ 532 (645)
T ss_pred HHHHHHHHHHHHHhhhcc--cccCCCCCceeeeEEEECCEEEEEEecCceEEEEec-----CCeEEEeCCCCCHHHHHHH
Confidence 999999999987654321 112356999999999999999999999999999853 2689999999998765443
Q ss_pred HHHHhcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeE
Q 015989 202 QEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQF 281 (397)
Q Consensus 202 ~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~f 281 (397)
.++ .+.+... | .+..++|||||+...+ ..+|++..+.++++| |
T Consensus 533 ~Gi---~~~~a~~--------~-p~~~~LTrALG~~~~~------------------------~l~Pdi~~~~L~~gD-~ 575 (645)
T PRK14559 533 RGV---EPQIAYA--------R-PDAYQLTQALGPRDNS------------------------AIQPDIQFLEIEEDT-L 575 (645)
T ss_pred hCC---CHHHHhc--------C-cccceeeeccCCCCCC------------------------cccceEEEEEcCCCC-E
Confidence 321 1111111 2 1234899999997533 457999999999877 5
Q ss_pred EEEEcCCCCCC--CCH---HHHHHHHHcC-CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEc
Q 015989 282 LIFASDGLWEH--LSN---QDAVDIVQNH-PHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFL 355 (397)
Q Consensus 282 LILaSDGlwd~--ls~---~ei~~iv~~~-~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l 355 (397)
||||||||||+ +.. +++..++... +.+.++++|++.|+.++ ++||||+|||++
T Consensus 576 lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~g---------------------g~DNITvIvV~l 634 (645)
T PRK14559 576 LLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYN---------------------GHDNITAILVRL 634 (645)
T ss_pred EEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC---------------------CCCcEEEEEEEe
Confidence 77899999994 554 3455666554 45678899999887654 799999999998
Q ss_pred CCc
Q 015989 356 DSH 358 (397)
Q Consensus 356 ~~~ 358 (397)
+..
T Consensus 635 ~~~ 637 (645)
T PRK14559 635 KVR 637 (645)
T ss_pred ccC
Confidence 754
No 11
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=7.3e-34 Score=266.82 Aligned_cols=234 Identities=38% Similarity=0.604 Sum_probs=188.8
Q ss_pred eccCCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhccc---chHHHHHHHHHHHHH
Q 015989 53 VQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQS---MSVDVIKKAYQATED 129 (397)
Q Consensus 53 ~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~---~~~~~l~~a~~~~~~ 129 (397)
.+.+..+||++.+.... ..+..+|+|||||||..+|+++++.+...+.+....... .+.+.|++++..+++
T Consensus 14 ~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (255)
T smart00332 14 QGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDE 87 (255)
T ss_pred CCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHH
Confidence 44567899998873211 145789999999999999999999999988875543322 477889999999999
Q ss_pred HHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCC
Q 015989 130 GFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHP 209 (397)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~ 209 (397)
++.+...... ....+|||++++++.++++|++|+||||+|++++ +++.+||.||++.++.|..||...+.
T Consensus 88 ~~~~~~~~~~----~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~------~~~~~lt~dh~~~~~~~~~~i~~~~~ 157 (255)
T smart00332 88 EILEELESLE----EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRN------GKAVQLTEDHKPSNEDERARIEAAGG 157 (255)
T ss_pred HHHHhhhhcc----CCCCCCccEEEEEEECCEEEEEeccCceEEEEeC------CceeEcCCCCCCcCHHHHHHHHHcCC
Confidence 9887654322 2356899999999999999999999999999997 67899999999999999999887653
Q ss_pred CCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEc-cCCCeEEEEEcCC
Q 015989 210 DDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHEL-QPFDQFLIFASDG 288 (397)
Q Consensus 210 ~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l-~~~D~fLILaSDG 288 (397)
.+.+ ++.++...+||++|+..+| |.+.++|++...++ .++| +|||||||
T Consensus 158 -----~~~~---~~~~~~~~lt~~~g~~~~~---------------------~~i~~~p~~~~~~~~~~~d-~ill~SDG 207 (255)
T smart00332 158 -----FVIN---GRVNGVLALSRAIGDFFLK---------------------PYVSAEPDVTVVELTEKDD-FLILASDG 207 (255)
T ss_pred -----EEEC---CeECCeEecccccCCHhhc---------------------CCeEeeeEEEEEEecCCCc-EEEEECCc
Confidence 1111 2666667899999998765 34789999999996 6766 68889999
Q ss_pred CCCCCCHHHHHHHHHcCC----CchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEE
Q 015989 289 LWEHLSNQDAVDIVQNHP----HSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVV 353 (397)
Q Consensus 289 lwd~ls~~ei~~iv~~~~----~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv 353 (397)
|||+++++++.+++.... +..+++.|++.|... +..||+|+|||
T Consensus 208 v~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~---------------------~~~Dn~T~ivv 255 (255)
T smart00332 208 LWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALAR---------------------GSKDNITVIVV 255 (255)
T ss_pred cccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHc---------------------CCCCCeEEEEC
Confidence 999999999999998753 567888888877653 26899999985
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-29 Score=234.56 Aligned_cols=252 Identities=31% Similarity=0.447 Sum_probs=183.3
Q ss_pred CCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhc---------------------------------------c
Q 015989 73 LESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQ---------------------------------------Q 113 (397)
Q Consensus 73 ~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~---------------------------------------~ 113 (397)
+....++.+|.+||||.|..+|-.|++.+.+.+...+.+. +
T Consensus 138 ~a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E 217 (493)
T KOG1323|consen 138 FAPRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHE 217 (493)
T ss_pred cCCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchH
Confidence 3445578999999999999999999999888775533210 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCC
Q 015989 114 SMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEH 193 (397)
Q Consensus 114 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH 193 (397)
.....+|+.||+.+|+++...-+ .|. ..+|||+++++.--++||+||.||||++++|+ +.+++||.+.
T Consensus 218 ~LViGAlEsAFqemDeqiarer~-~~~-----~~GGCtalvvi~llGKlYvaNAGDsRAIlVrn------deirplS~ef 285 (493)
T KOG1323|consen 218 HLVIGALESAFQEMDEQIARERQ-VWR-----LPGGCTALVVIVLLGKLYVANAGDSRAILVRN------DEIRPLSKEF 285 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHH-hhc-----CCCCceEEEeeeeccceEEccCCCceEEEEec------CCeeeccccc
Confidence 23456889999999988765322 221 45899999999999999999999999999998 8999999999
Q ss_pred CCCCHHHHHHHHhcC---C-------------------CCCCeEEEeC-------------------------CeeeecC
Q 015989 194 NVGIESVRQEMHSMH---P-------------------DDSQIVVLKH-------------------------NVWRVKG 226 (397)
Q Consensus 194 ~~~~~~e~~ri~~~~---~-------------------~~~~~~~~~~-------------------------~~~rv~G 226 (397)
+| +.||+|++... | +-+..+.+++ ...|+.+
T Consensus 286 TP--etERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~ 363 (493)
T KOG1323|consen 286 TP--ETERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLA 363 (493)
T ss_pred Cc--HHHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhh
Confidence 88 56888887753 1 0011122221 1237788
Q ss_pred ccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccC----CCeEEEEEcCCCCCCCCHHHHHHHH
Q 015989 227 LIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQP----FDQFLIFASDGLWEHLSNQDAVDIV 302 (397)
Q Consensus 227 ~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~----~D~fLILaSDGlwd~ls~~ei~~iv 302 (397)
.|.+||.|||..+|...-+ -..+|++++.|+|++++|.. .|..+|||||||||+++++|+..+|
T Consensus 364 TigVsRGlGDH~Lkv~dsn------------l~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~V 431 (493)
T KOG1323|consen 364 TIGVSRGLGDHHLKVVDSN------------LSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIV 431 (493)
T ss_pred hheeccccCcceeeeecCC------------cccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHH
Confidence 8999999999999976522 13578999999999999874 3457999999999999999999999
Q ss_pred HcCCC----------chHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCc
Q 015989 303 QNHPH----------SGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSH 358 (397)
Q Consensus 303 ~~~~~----------~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~ 358 (397)
+...+ ..+|+.|+..|....+. +..++ ..-+-++-|||||.||.+...
T Consensus 432 rs~L~~~dp~Dp~RYt~aaqdlva~arg~~k~-rgWr~-------~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 432 RSFLPSTDPADPSRYTQAAQDLVAAARGQQKD-RGWRM-------NNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred HHhcCCCCCCChhHHHHHHHHHHHHhcCccCC-Cceec-------cCCCcCCCCceEEEEEeccCC
Confidence 88522 23566666655433211 11111 112335789999999998653
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-23 Score=195.06 Aligned_cols=222 Identities=23% Similarity=0.284 Sum_probs=148.1
Q ss_pred CcCcchhhcccCCCCCCCCCCceEEEEEecCCChhH-----HHHHHHHHHHHHHHHhhhhc---ccchHHHHHHHHHHHH
Q 015989 57 NLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPE-----TSRYINDHLFQHLKRFTSEQ---QSMSVDVIKKAYQATE 128 (397)
Q Consensus 57 ~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~-----as~~a~~~l~~~l~~~~~~~---~~~~~~~l~~a~~~~~ 128 (397)
+.-||++++ ...+...+.|||||+|||. .+.|..+ |.....+..... ...+...|.+||.++-
T Consensus 89 ~~GEDa~Fv--------ss~~~~~v~GVADGVGGWa~~GiDpg~fS~e-LM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~ 159 (330)
T KOG1379|consen 89 KGGEDAWFV--------SSNPHAIVMGVADGVGGWAEYGIDPGAFSRE-LMSNCERLVQNSDFNPSDPVNLLEKAYAELK 159 (330)
T ss_pred CCCCcceee--------ccCcccceEEEccccchHhhcCcCHHHHHHH-HHHHHHHHhcccccCCCChHHHHHHHHHHHh
Confidence 356899988 2335678999999999996 5655544 444444443332 2567888888887665
Q ss_pred HHHHHHHhhhCCCCCCcccccceEEEEEEe--CCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCC--CCCHHHHHHH
Q 015989 129 DGFFSLVTKQWPMKPQIAAVGSCCLVGVIS--CGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHN--VGIESVRQEM 204 (397)
Q Consensus 129 ~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~--~~~~~e~~ri 204 (397)
++ +...-++|||+++++. +++||+||+|||.+.++|+ ++++.-|..+. ++-+-.
T Consensus 160 ~~------------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~------G~vv~~S~~Q~H~FN~PyQ---- 217 (330)
T KOG1379|consen 160 SQ------------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVRE------GKVVFRSPEQQHYFNTPYQ---- 217 (330)
T ss_pred hc------------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEEC------CEEEEcCchheeccCCcee----
Confidence 41 1124467888888888 8899999999999999998 88887776542 221110
Q ss_pred HhcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEE
Q 015989 205 HSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIF 284 (397)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLIL 284 (397)
....|.+ ...+++|. .-..+++.++++++|. |||
T Consensus 218 Ls~~p~~------------------~~~~~~d~---------------------------p~~ad~~~~~v~~GDv-Iil 251 (330)
T KOG1379|consen 218 LSSPPEG------------------YSSYISDV---------------------------PDSADVTSFDVQKGDV-IIL 251 (330)
T ss_pred eccCCcc------------------ccccccCC---------------------------ccccceEEEeccCCCE-EEE
Confidence 0000000 01112221 2234678999999996 889
Q ss_pred EcCCCCCCCCHHHHHHHHHcC------CCchHHHHHHHHHHHHHHHhhhhhhhhh--hccccccCCccCCceEEEEEEc
Q 015989 285 ASDGLWEHLSNQDAVDIVQNH------PHSGSARRLVKAALQEAAKKREMRYSDL--KKIDRGVRRHFHDDITVIVVFL 355 (397)
Q Consensus 285 aSDGlwd~ls~~ei~~iv~~~------~~~~~a~~Lv~~Al~~~a~~~~~~~~~l--~~~~~~~~r~~~DNiTvivv~l 355 (397)
|||||||+|.+++|++++... ..+..|+++++.|.+.+-......-.+. ++-......|+.|||||||..+
T Consensus 252 ATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 252 ATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred ecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 999999999999999999874 3467889999988877633322211111 1222335566899999999763
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.84 E-value=3e-20 Score=192.74 Aligned_cols=216 Identities=21% Similarity=0.260 Sum_probs=176.4
Q ss_pred eEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEEEe
Q 015989 79 GTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVIS 158 (397)
Q Consensus 79 ~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~ 158 (397)
.+.||.+||-+......++...+..++.+........ .+.|+.+|...++++-+.. ..-|..++.+.|.
T Consensus 551 ~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~e-t~~mr~~fl~~~rklg~~g----------~~lg~~~~~~~i~ 619 (1081)
T KOG0618|consen 551 QATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNE-TEQMRNTFLRLNRKLGEEG----------QVLGGSVVLCQIV 619 (1081)
T ss_pred cceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccCh-HHHHHHHHHHHhhhhhhhh----------ccccchhhheeec
Confidence 3799999999999999999999999998876654433 4459999999999885433 2244555555565
Q ss_pred CC--------eEEEEEcCCceEEEEeeeccCCcEEEEEccCCC-CCCCHHHHHHHHhcCCCCCCeEEEeCCeeeecCccc
Q 015989 159 CG--------TLYIANLGDSRAVLGRLVKATGEVLAIQLSSEH-NVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQ 229 (397)
Q Consensus 159 ~~--------~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH-~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~ 229 (397)
.+ ++++||||+|.++++++ ++..++|+-. -..+++|.+||...++ + +.. ..+++|...
T Consensus 620 ~d~~~~asS~~l~~Anvg~c~avls~n------g~~~p~t~~~~~~v~~eE~~RI~~~~g----~-i~e--d~k~ngvt~ 686 (1081)
T KOG0618|consen 620 EDSLSPASSKTLFAANVGTCMAVLSRN------GKPLPTTRSPMLEVDREEYKRIVDSKG----F-ITE--DNKLNGVTS 686 (1081)
T ss_pred ccccCcccchhhhHhhhccchhhhhhc------CCcCcccccccccCCHHHHHHHHHhcC----e-ecC--CCeeeceee
Confidence 43 78999999999999998 6666666655 3348889999988762 2 222 238999999
Q ss_pred cccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCCCCCCCHHHHHHHHHcC-CCc
Q 015989 230 VSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH-PHS 308 (397)
Q Consensus 230 vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~~-~~~ 308 (397)
.||++|.+.. .|.|-+.|+|....|++.|+|||+|+-+||++|+-+++++.++.. ++-
T Consensus 687 ~tR~iG~~~l---------------------~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL 745 (1081)
T KOG0618|consen 687 STRAIGPFSL---------------------FPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPL 745 (1081)
T ss_pred eeeecccccc---------------------cccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchH
Confidence 9999999863 367999999999999999999999999999999999999999965 556
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCccc
Q 015989 309 GSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLV 360 (397)
Q Consensus 309 ~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~~~ 360 (397)
.+|++|+..|...+ ..||++|+||++.....
T Consensus 746 ~AAkKL~d~AqSYg---------------------c~~nv~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 746 LAAKKLCDLAQSYG---------------------CAENVSVLVVRLNHLEE 776 (1081)
T ss_pred HHHHHHHHHHHhcc---------------------cccCeeEEEEEeecchh
Confidence 78999999999988 58999999999987654
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.76 E-value=8e-18 Score=153.97 Aligned_cols=181 Identities=20% Similarity=0.271 Sum_probs=96.2
Q ss_pred eccCCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcccchHHH-HHHHHHHHHHHH
Q 015989 53 VQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDV-IKKAYQATEDGF 131 (397)
Q Consensus 53 ~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~-l~~a~~~~~~~l 131 (397)
.+.+.++||++.+. ..+++.+++|+||+||...++.++..+.+.+.+.+.......... ..+.+..+.+++
T Consensus 6 ~~~~~~nqD~~~~~--------~~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T PF13672_consen 6 RGRGAPNQDAFGIR--------TDDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEI 77 (212)
T ss_dssp -TTSSS--EEEEEE---------TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCEEee--------eCCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 44567889999762 123446779999999776666666666655555444332221111 223333333333
Q ss_pred HHHH------hhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHH
Q 015989 132 FSLV------TKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMH 205 (397)
Q Consensus 132 ~~~~------~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~ 205 (397)
.... ... .......+||++++++.++.++++|+||||+|+... .+.+..++.+|+. +..
T Consensus 78 ~~~~~~~~~~~~~---~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~-----~g~~~~l~~~~~~----~~~--- 142 (212)
T PF13672_consen 78 LSIVRAFQSAKQA---DLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRR-----NGEIQQLTDDHSG----EYP--- 142 (212)
T ss_dssp HHHH----HHHHH---SGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEE-----TTEEEE-S---BH----HHH---
T ss_pred HHHhhhhhhhhhc---cccccccCceEEEEEEECCEEEEEEECCCeEEEEEC-----CCEEEEcCCCccc----hhh---
Confidence 3211 000 113356899999999999999999999999976653 2788899999961 111
Q ss_pred hcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEE
Q 015989 206 SMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFA 285 (397)
Q Consensus 206 ~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILa 285 (397)
..++.+.... .....++..+.+.++|. |+||
T Consensus 143 -----------------------~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~d~-ilL~ 173 (212)
T PF13672_consen 143 -----------------------NQTRSLTGDD-------------------------PEPDVQYGSIPLEEGDV-ILLC 173 (212)
T ss_dssp -----------------------HCTTSCCHHC-------------------------CCTETEEEEEE--TT-E-EEEE
T ss_pred -----------------------hhhhccCccc-------------------------cccCCeEEEEEcCCCCE-EEEE
Confidence 1123333221 01223566777888887 6679
Q ss_pred cCCCCCCCCHHH-HHHHHHcC
Q 015989 286 SDGLWEHLSNQD-AVDIVQNH 305 (397)
Q Consensus 286 SDGlwd~ls~~e-i~~iv~~~ 305 (397)
|||||+.+...+ +..++...
T Consensus 174 SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 174 SDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp -HHHHTTS-HHHHHHHH----
T ss_pred CcCccccCCCHHHHHHHhhhc
Confidence 999999998665 66666553
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.71 E-value=4e-16 Score=140.59 Aligned_cols=158 Identities=18% Similarity=0.159 Sum_probs=114.1
Q ss_pred ceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEEE
Q 015989 78 YGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVI 157 (397)
Q Consensus 78 ~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i 157 (397)
+..+++|+||||+...|.+++..+...+.+..... ..+.+.+..+++.+... ....+|+|++++++
T Consensus 29 ~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-----~~~~~~l~~~n~~l~~~---------~~~~~~~T~~~~~i 94 (193)
T smart00331 29 GRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-----ISLSQILERLNRAIYEN---------GEDGMFATLFLALY 94 (193)
T ss_pred CeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-----CCHHHHHHHHHHHHHhc---------CCCCcEEEEEEEEE
Confidence 35899999999988888888988888887765432 12555666777776543 12457999999988
Q ss_pred --eCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeeeecCccccccccc
Q 015989 158 --SCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIG 235 (397)
Q Consensus 158 --~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalG 235 (397)
..++++++|+||+|+|+++.+ +...+++.+ .++.+|
T Consensus 95 d~~~~~l~~~~~Gd~~~~~~~~~-----~~~~~~~~~-------------------------------------~~~~lG 132 (193)
T smart00331 95 DFAGGTLSYANAGHSPPYLLRAD-----GGLVEDLDD-------------------------------------LGAPLG 132 (193)
T ss_pred ECCCCEEEEEeCCCCceEEEECC-----CCeEEEcCC-------------------------------------CCceee
Confidence 578999999999999999830 223333332 133455
Q ss_pred cccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCCCCCCCHHHHHHHHHcCC---CchHHH
Q 015989 236 DVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHP---HSGSAR 312 (397)
Q Consensus 236 d~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~~~---~~~~a~ 312 (397)
... ..++++..+.+.++|. |+|+||||||.++.+++.+++.+.. ++..++
T Consensus 133 ~~~--------------------------~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~ 185 (193)
T smart00331 133 LEP--------------------------DVEVDVRELTLEPGDL-LLLYTDGLTEARNPERLEELLEELLGSPPAEIAQ 185 (193)
T ss_pred eCC--------------------------CCcceeEEEeeCCCCE-EEEECCCccccCChHHHHHHHHHhcCCCHHHHHH
Confidence 432 2346678889999997 7779999999999999999998853 345555
Q ss_pred HHHHHH
Q 015989 313 RLVKAA 318 (397)
Q Consensus 313 ~Lv~~A 318 (397)
++.+.+
T Consensus 186 ~i~~~~ 191 (193)
T smart00331 186 RILEEL 191 (193)
T ss_pred HHHHHH
Confidence 555543
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.48 E-value=1.5e-12 Score=139.65 Aligned_cols=190 Identities=17% Similarity=0.141 Sum_probs=127.8
Q ss_pred CCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHH
Q 015989 56 NNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLV 135 (397)
Q Consensus 56 ~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~ 135 (397)
+....|.+.+. ..+++..+++|+||+|....|..++..+.+.+.+..... .. ...++..+|..+....
T Consensus 564 ~~vsGD~y~~~-------~l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g-~~----~~~ai~~lN~~L~~~~ 631 (764)
T TIGR02865 564 ELVSGDSYSFG-------KLSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG-FD----REVAIKTVNSILSLRS 631 (764)
T ss_pred CcccCceEEEE-------EECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHhCC
Confidence 44667876551 223345789999999955555566666666666544322 22 2456667776654321
Q ss_pred hhhCCCCCCcccccceEEEEEEe--CCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCCCCCC
Q 015989 136 TKQWPMKPQIAAVGSCCLVGVIS--CGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQ 213 (397)
Q Consensus 136 ~~~~~~~~~~~~~GtT~~v~~i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~~~~~ 213 (397)
...+.+|+.+++++ .+++.++|+|+++.|+.++ +.+.+++..+-|
T Consensus 632 ---------~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~------~~v~~i~s~~lP------------------ 678 (764)
T TIGR02865 632 ---------TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRG------AKVEVIRSSNLP------------------ 678 (764)
T ss_pred ---------CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEEC------CEEEEecCCCce------------------
Confidence 13468999988886 6899999999999999886 566666533211
Q ss_pred eEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCCCCCC
Q 015989 214 IVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHL 293 (397)
Q Consensus 214 ~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~l 293 (397)
+|-.. ..+++....++.++|. |||+|||+||..
T Consensus 679 --------------------lGil~--------------------------~~~~~~~~~~L~~GD~-Lll~SDGv~E~~ 711 (764)
T TIGR02865 679 --------------------IGILD--------------------------EVDVELVRKKLKNGDL-IVMVSDGVLEGE 711 (764)
T ss_pred --------------------eEecc--------------------------CCccceEEEEeCCCCE-EEEECCCCCcCC
Confidence 12111 2346677889999996 888999999988
Q ss_pred CHHH-----HHHHHHcC---CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEc
Q 015989 294 SNQD-----AVDIVQNH---PHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFL 355 (397)
Q Consensus 294 s~~e-----i~~iv~~~---~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l 355 (397)
++++ +.+++... ++++.++.|++.+++.... ...||+|++++++
T Consensus 712 ~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~~------------------~~~DD~Tvlvirv 763 (764)
T TIGR02865 712 KEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRSG------------------KIKDDMTVIVAKV 763 (764)
T ss_pred cccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCC------------------CCCCCeEEEEEEe
Confidence 7533 67777653 5677888888887764321 1479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.37 E-value=4.3e-11 Score=107.51 Aligned_cols=179 Identities=21% Similarity=0.236 Sum_probs=107.3
Q ss_pred ceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEEE
Q 015989 78 YGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVI 157 (397)
Q Consensus 78 ~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i 157 (397)
+..++.|+|+.|-.-.|.+.+..+...+....... .. ..+.+..+++.+...... ....+|++++.+
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-~~----p~~~l~~ln~~l~~~~~~--------~~~~~t~~~~~~ 69 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-LD----PEELLEALNRRLYRDLKG--------DNRYATACYAII 69 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-TS----HHHHHHHHHHHHHHHTTT--------TSTTEEEEEEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHHHhhh--------ccccceEEEEEe
Confidence 45899999999944445555555666666554332 22 445556666666443321 136778888887
Q ss_pred e--CCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeeeecCccccccccc
Q 015989 158 S--CGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIG 235 (397)
Q Consensus 158 ~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalG 235 (397)
+ .++++++|+|++++++++++ ......+.... -.+|
T Consensus 70 d~~~~~l~~~~aG~~~~l~~~~~----~~~~~~~~~~~--------------------------------------~~lG 107 (193)
T PF07228_consen 70 DPETGTLTYANAGHPPPLLLRPG----GREIEQLESEG--------------------------------------PPLG 107 (193)
T ss_dssp ETTTTEEEEEEESSSEEEEEETT----CTEEEEETCSS--------------------------------------BBCS
T ss_pred cccceEEEEeCCCCCCEEEEecc----ccceeecccCc--------------------------------------ccee
Confidence 6 56899999999999999961 11222221111 0133
Q ss_pred cccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCCCCCCCHH-------HHHHHHHcC---
Q 015989 236 DVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQ-------DAVDIVQNH--- 305 (397)
Q Consensus 236 d~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~-------ei~~iv~~~--- 305 (397)
-.. ...+....+.+.++|. |+|+||||+|....+ .+.+++.+.
T Consensus 108 ~~~--------------------------~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~ 160 (193)
T PF07228_consen 108 IFE--------------------------DIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGL 160 (193)
T ss_dssp SSC--------------------------TTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS
T ss_pred eec--------------------------cccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCC
Confidence 321 2334566788999997 778999999998544 345666643
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcC
Q 015989 306 PHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLD 356 (397)
Q Consensus 306 ~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~ 356 (397)
+.+..++.+++.+...+ .....||+|+++++++
T Consensus 161 ~~~~~~~~l~~~~~~~~------------------~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 161 SPQEIIDALLEAIDRFG------------------KGPLRDDITVLVIRRQ 193 (193)
T ss_dssp -HHHHHHHHHHHHHHHT------------------TSSTSS-EEEEEEEE-
T ss_pred CHHHHHHHHHHHHHHhc------------------CCCCCCceEEEEEEEC
Confidence 33455555555544411 1225899999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.15 E-value=0.00016 Score=71.83 Aligned_cols=180 Identities=18% Similarity=0.178 Sum_probs=106.8
Q ss_pred ceEEEEEecCCC-hhHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEE
Q 015989 78 YGTFIGIYDGHG-GPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGV 156 (397)
Q Consensus 78 ~~~l~gV~DGhG-G~~as~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~ 156 (397)
....++|.|..| |-.++-. .......+........-.+.+ .+..+++.+..... ..+=+|....+
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~----~l~~~n~~~~~~~~---------~~~f~T~~~~~ 239 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPAD----VLETLNRVLKQNLE---------EDMFVTLFLGV 239 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHH----HHHHHHHHHHhccc---------CCcEEEEEEEE
Confidence 457899999999 7766655 333222232222221233333 33344444333111 12567777777
Q ss_pred Ee--CCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCeeeecCcccccccc
Q 015989 157 IS--CGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSI 234 (397)
Q Consensus 157 i~--~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRal 234 (397)
++ .+.+..+|+|=--+++.+.+... ....+. .....+
T Consensus 240 ~d~~~~~l~y~~aGH~p~~i~~~~~~~---~~~~l~--------------------------------------~~g~pi 278 (367)
T COG2208 240 YDLDSGELTYSNAGHEPALILSADGEI---EVEDLT--------------------------------------ALGLPI 278 (367)
T ss_pred EeccCCEEEEeeCCCCCeeEEEcCCCc---eeEEcc--------------------------------------CCCcee
Confidence 65 67999999998888888761000 011111 234556
Q ss_pred ccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCCCC-------CCCHHHHHHHHHcC--
Q 015989 235 GDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWE-------HLSNQDAVDIVQNH-- 305 (397)
Q Consensus 235 Gd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGlwd-------~ls~~ei~~iv~~~-- 305 (397)
|... ...+.+....++++|. ||+.|||+.| .+..+...+++...
T Consensus 279 G~~~--------------------------~~~~~~~~~~l~~gd~-lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~ 331 (367)
T COG2208 279 GLLP--------------------------DYQYEVASLQLEPGDL-LVLYTDGVTEARNSDGEFFGLERLLKILGRLLG 331 (367)
T ss_pred eecC--------------------------CccchheeEEecCCCE-EEEEcCCeeeeecCCccEecHHHHHHHHHHHhC
Confidence 6553 4456778889999885 8889999999 56777777777742
Q ss_pred -CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcC
Q 015989 306 -PHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLD 356 (397)
Q Consensus 306 -~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~ 356 (397)
+++++++.+.+...+.... ....||+|+++++++
T Consensus 332 ~~~~e~~~~i~~~l~~~~~~-----------------~~~~DDiTll~lk~~ 366 (367)
T COG2208 332 QPAEEILEAILESLEELQGD-----------------QIQDDDITLLVLKVK 366 (367)
T ss_pred CCHHHHHHHHHHHHHHhhCC-----------------ccccCceEEEEEEec
Confidence 3445555555544443321 114688999999975
No 20
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=40.53 E-value=16 Score=27.29 Aligned_cols=20 Identities=25% Similarity=0.390 Sum_probs=14.5
Q ss_pred CCCeEEEEEcCCCCCCCCHHH
Q 015989 277 PFDQFLIFASDGLWEHLSNQD 297 (397)
Q Consensus 277 ~~D~fLILaSDGlwd~ls~~e 297 (397)
+|.+|| +|+||+|=.+...-
T Consensus 26 ~G~Rll-va~nGv~lEv~r~W 45 (72)
T PF09436_consen 26 PGHRLL-VASNGVFLEVRRPW 45 (72)
T ss_pred CCcEEE-EecCcEEEEEechH
Confidence 677855 59999997765443
No 21
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=23.16 E-value=67 Score=25.39 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=27.9
Q ss_pred EEEccCCCeEEEEEcCCCCCCCCHHHHHHHHHcCC
Q 015989 272 AHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHP 306 (397)
Q Consensus 272 ~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~~~ 306 (397)
..-++++|. ++|+.|||+-.+...+..+-++..+
T Consensus 19 l~~l~~~D~-vlL~qdGV~aAl~~~~~~~sl~~~p 52 (96)
T COG2168 19 LRLLTEGDA-VLLLQDGVYAALKGNRYLASLRESP 52 (96)
T ss_pred HHHhcccCe-EEEEcccchhhhcCcHHHHHHhcCc
Confidence 345678998 7779999999999988888888765
Done!