Query 015990
Match_columns 397
No_of_seqs 468 out of 3678
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 06:01:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fut_A Dimethyladenosine trans 100.0 4.3E-58 1.5E-62 438.7 27.6 264 99-388 5-269 (271)
2 3tqs_A Ribosomal RNA small sub 100.0 2.2E-57 7.6E-62 430.6 21.6 252 114-386 2-254 (255)
3 3uzu_A Ribosomal RNA small sub 100.0 2.2E-56 7.5E-61 428.9 21.1 259 112-389 13-275 (279)
4 3gru_A Dimethyladenosine trans 100.0 8.9E-54 3E-58 413.4 20.2 268 102-391 11-290 (295)
5 1qyr_A KSGA, high level kasuga 100.0 4.4E-52 1.5E-56 393.6 23.0 248 121-388 1-250 (252)
6 3ftd_A Dimethyladenosine trans 100.0 1.7E-52 5.7E-57 395.9 19.9 243 113-388 3-246 (249)
7 1i4w_A Mitochondrial replicati 100.0 3.1E-49 1E-53 389.2 15.4 261 113-387 24-331 (353)
8 1zq9_A Probable dimethyladenos 100.0 4.5E-45 1.5E-49 351.6 24.1 247 116-386 3-277 (285)
9 1qam_A ERMC' methyltransferase 100.0 1.5E-44 5.3E-49 340.3 21.4 238 114-387 3-240 (244)
10 2h1r_A Dimethyladenosine trans 100.0 7.9E-44 2.7E-48 345.2 22.9 256 111-391 12-293 (299)
11 1yub_A Ermam, rRNA methyltrans 100.0 4.1E-39 1.4E-43 302.9 8.1 239 114-388 2-240 (245)
12 1wy7_A Hypothetical protein PH 99.5 5E-13 1.7E-17 120.7 18.7 102 114-231 20-126 (207)
13 3lbf_A Protein-L-isoaspartate 99.5 5.1E-13 1.7E-17 120.9 16.1 146 86-244 6-171 (210)
14 1vbf_A 231AA long hypothetical 99.5 5.9E-13 2E-17 122.2 15.1 142 86-244 2-162 (231)
15 3p9n_A Possible methyltransfer 99.5 1.6E-13 5.4E-18 122.5 9.4 96 125-230 25-126 (189)
16 2esr_A Methyltransferase; stru 99.4 1E-12 3.4E-17 115.7 8.2 91 127-228 16-111 (177)
17 2yxe_A Protein-L-isoaspartate 99.4 1E-11 3.4E-16 112.7 14.6 147 85-244 5-174 (215)
18 3mti_A RRNA methylase; SAM-dep 99.4 2.9E-12 1E-16 113.5 10.5 96 138-244 19-132 (185)
19 3eey_A Putative rRNA methylase 99.3 1.9E-11 6.5E-16 109.3 15.3 85 132-227 13-103 (197)
20 2okc_A Type I restriction enzy 99.3 8.8E-12 3E-16 126.5 14.7 102 114-229 145-265 (445)
21 3evz_A Methyltransferase; NYSG 99.3 3.7E-12 1.3E-16 116.8 10.8 95 124-229 38-135 (230)
22 1ne2_A Hypothetical protein TA 99.3 9E-12 3.1E-16 112.0 12.7 98 115-231 23-124 (200)
23 3njr_A Precorrin-6Y methylase; 99.3 1.9E-11 6.6E-16 110.9 14.7 111 122-244 36-151 (204)
24 1jg1_A PIMT;, protein-L-isoasp 99.3 2.4E-11 8.2E-16 112.3 15.5 148 84-244 18-186 (235)
25 2pbf_A Protein-L-isoaspartate 99.3 2.7E-11 9.3E-16 110.9 15.5 149 87-244 12-190 (227)
26 3lpm_A Putative methyltransfer 99.3 4.1E-12 1.4E-16 119.3 9.4 88 133-230 40-132 (259)
27 1pjz_A Thiopurine S-methyltran 99.3 7.3E-12 2.5E-16 113.5 10.1 102 130-242 11-135 (203)
28 3q87_B N6 adenine specific DNA 99.3 7E-12 2.4E-16 110.4 9.5 84 125-229 5-90 (170)
29 1dl5_A Protein-L-isoaspartate 99.3 2.7E-11 9.4E-16 117.3 14.3 141 90-244 4-172 (317)
30 4gek_A TRNA (CMO5U34)-methyltr 99.3 9.8E-12 3.3E-16 117.5 10.8 76 139-228 68-150 (261)
31 3e05_A Precorrin-6Y C5,15-meth 99.3 3.8E-11 1.3E-15 108.1 13.9 109 124-244 23-139 (204)
32 3uwp_A Histone-lysine N-methyl 99.3 1.1E-11 3.9E-16 123.4 11.0 110 125-244 157-285 (438)
33 2fpo_A Methylase YHHF; structu 99.3 1.4E-11 4.9E-16 111.5 10.5 93 126-229 38-134 (202)
34 3tm4_A TRNA (guanine N2-)-meth 99.3 1.9E-11 6.5E-16 121.3 12.3 94 124-230 201-299 (373)
35 3tma_A Methyltransferase; thum 99.3 1.8E-11 6.3E-16 120.3 11.9 95 123-229 185-284 (354)
36 1r18_A Protein-L-isoaspartate( 99.3 4.2E-11 1.4E-15 109.9 13.5 145 87-244 16-191 (227)
37 1dus_A MJ0882; hypothetical pr 99.3 3.7E-11 1.3E-15 106.1 12.4 90 128-230 39-132 (194)
38 1uwv_A 23S rRNA (uracil-5-)-me 99.3 2.1E-11 7.1E-16 123.4 11.9 105 127-239 272-378 (433)
39 1ws6_A Methyltransferase; stru 99.3 2.1E-11 7.2E-16 105.9 10.1 106 123-236 21-130 (171)
40 3gdh_A Trimethylguanosine synt 99.3 1.4E-11 4.8E-16 113.9 9.4 94 125-231 61-158 (241)
41 2yxd_A Probable cobalt-precorr 99.2 7.8E-11 2.7E-15 103.1 13.6 107 123-243 17-127 (183)
42 2f8l_A Hypothetical protein LM 99.2 1.8E-11 6.2E-16 119.9 10.6 100 115-228 101-212 (344)
43 2gb4_A Thiopurine S-methyltran 99.2 2.9E-11 9.9E-16 113.6 11.1 108 125-243 52-187 (252)
44 2fhp_A Methylase, putative; al 99.2 4.8E-11 1.7E-15 105.3 11.9 97 124-228 26-127 (187)
45 3hm2_A Precorrin-6Y C5,15-meth 99.2 3.6E-11 1.2E-15 105.3 10.9 109 124-244 8-124 (178)
46 2ar0_A M.ecoki, type I restric 99.2 2.6E-11 9.1E-16 125.9 11.6 171 115-310 144-363 (541)
47 3ujc_A Phosphoethanolamine N-m 99.2 2.4E-11 8.1E-16 113.2 10.1 113 120-244 32-156 (266)
48 1nv8_A HEMK protein; class I a 99.2 2.5E-11 8.7E-16 116.0 9.7 90 127-230 109-205 (284)
49 1vl5_A Unknown conserved prote 99.2 3.2E-11 1.1E-15 112.7 9.8 103 130-244 26-137 (260)
50 3ofk_A Nodulation protein S; N 99.2 1.5E-11 5.3E-16 111.4 7.4 88 128-228 38-125 (216)
51 4dzr_A Protein-(glutamine-N5) 99.2 5.8E-12 2E-16 113.3 4.5 96 128-231 16-115 (215)
52 3a27_A TYW2, uncharacterized p 99.2 3.4E-11 1.1E-15 114.3 10.0 120 112-244 90-216 (272)
53 3dmg_A Probable ribosomal RNA 99.2 4E-11 1.4E-15 119.3 10.6 89 129-229 219-310 (381)
54 2ift_A Putative methylase HI07 99.2 2.4E-11 8E-16 109.9 8.0 92 128-229 39-137 (201)
55 2b3t_A Protein methyltransfera 99.2 4.4E-11 1.5E-15 113.3 10.0 90 127-230 96-189 (276)
56 4dcm_A Ribosomal RNA large sub 99.2 3E-11 1E-15 120.0 9.2 87 130-229 211-304 (375)
57 1i1n_A Protein-L-isoaspartate 99.2 8.1E-11 2.8E-15 107.6 11.3 110 123-244 57-179 (226)
58 3iv6_A Putative Zn-dependent a 99.2 2.5E-11 8.7E-16 114.7 7.8 91 127-228 31-121 (261)
59 3hem_A Cyclopropane-fatty-acyl 99.2 1.4E-10 4.7E-15 111.0 13.0 103 128-245 59-181 (302)
60 2ih2_A Modification methylase 99.2 2E-11 6.8E-16 122.2 7.4 94 114-228 13-109 (421)
61 3mb5_A SAM-dependent methyltra 99.2 5.5E-11 1.9E-15 110.8 9.8 107 125-244 77-191 (255)
62 3hnr_A Probable methyltransfer 99.2 8.5E-11 2.9E-15 106.7 10.7 100 130-244 34-142 (220)
63 3khk_A Type I restriction-modi 99.2 3.2E-11 1.1E-15 125.2 8.4 103 114-229 219-341 (544)
64 2ozv_A Hypothetical protein AT 99.2 5.5E-11 1.9E-15 112.0 9.3 93 133-230 28-128 (260)
65 3dtn_A Putative methyltransfer 99.2 9.7E-11 3.3E-15 107.4 10.6 89 128-229 30-121 (234)
66 3bt7_A TRNA (uracil-5-)-methyl 99.2 7.2E-11 2.5E-15 116.9 10.2 116 127-243 200-322 (369)
67 3dlc_A Putative S-adenosyl-L-m 99.2 7.6E-11 2.6E-15 106.3 9.5 90 127-229 30-123 (219)
68 4hg2_A Methyltransferase type 99.2 3.1E-11 1.1E-15 113.8 7.1 100 126-243 26-131 (257)
69 2igt_A SAM dependent methyltra 99.2 6.6E-11 2.3E-15 115.6 9.7 94 126-227 137-235 (332)
70 2h00_A Methyltransferase 10 do 99.2 2.6E-10 9E-15 106.2 13.1 84 141-231 65-154 (254)
71 2frn_A Hypothetical protein PH 99.2 4.8E-11 1.6E-15 113.6 8.1 102 128-244 114-222 (278)
72 1fbn_A MJ fibrillarin homologu 99.2 7.5E-11 2.6E-15 108.6 9.1 107 129-244 59-175 (230)
73 3fpf_A Mtnas, putative unchara 99.2 1.2E-10 4.1E-15 111.6 10.8 103 128-244 109-219 (298)
74 2nxc_A L11 mtase, ribosomal pr 99.2 8.2E-11 2.8E-15 110.4 9.5 126 115-254 95-225 (254)
75 1nkv_A Hypothetical protein YJ 99.2 2E-10 6.7E-15 106.7 12.0 91 124-227 19-113 (256)
76 3ntv_A MW1564 protein; rossman 99.2 1.6E-10 5.6E-15 106.6 11.3 101 124-235 54-160 (232)
77 1l3i_A Precorrin-6Y methyltran 99.2 3.2E-10 1.1E-14 99.8 12.8 108 124-243 16-130 (192)
78 3ege_A Putative methyltransfer 99.1 7.7E-11 2.6E-15 110.5 9.2 92 120-227 13-104 (261)
79 1zx0_A Guanidinoacetate N-meth 99.1 7.5E-11 2.6E-15 108.9 8.9 84 127-223 47-134 (236)
80 1xxl_A YCGJ protein; structura 99.1 1.6E-10 5.4E-15 106.9 10.9 105 128-244 8-121 (239)
81 2pwy_A TRNA (adenine-N(1)-)-me 99.1 1.9E-10 6.4E-15 107.0 11.1 109 124-244 79-195 (258)
82 3k0b_A Predicted N6-adenine-sp 99.1 1.1E-10 3.7E-15 116.7 10.0 93 124-229 184-319 (393)
83 1i9g_A Hypothetical protein RV 99.1 1.6E-10 5.4E-15 109.2 10.5 109 124-244 82-200 (280)
84 3jwg_A HEN1, methyltransferase 99.1 2.2E-10 7.4E-15 104.1 11.1 91 125-227 13-112 (219)
85 1yzh_A TRNA (guanine-N(7)-)-me 99.1 1.2E-10 4.1E-15 105.9 9.3 78 140-227 40-121 (214)
86 3f4k_A Putative methyltransfer 99.1 1.4E-10 4.9E-15 107.7 9.9 92 126-229 30-126 (257)
87 3ldg_A Putative uncharacterize 99.1 1.4E-10 4.9E-15 115.4 10.5 93 124-229 177-312 (384)
88 3grz_A L11 mtase, ribosomal pr 99.1 1.5E-10 5.3E-15 104.1 9.7 91 131-235 48-143 (205)
89 3m70_A Tellurite resistance pr 99.1 1E-10 3.4E-15 110.9 8.6 84 133-229 112-196 (286)
90 4df3_A Fibrillarin-like rRNA/T 99.1 1.9E-10 6.4E-15 106.8 10.1 100 136-244 72-179 (233)
91 3ldu_A Putative methylase; str 99.1 1.1E-10 3.8E-15 116.3 9.2 92 125-229 179-313 (385)
92 1o9g_A RRNA methyltransferase; 99.1 6.8E-11 2.3E-15 110.2 7.0 95 128-229 38-180 (250)
93 3vc1_A Geranyl diphosphate 2-C 99.1 1.7E-10 5.8E-15 111.1 10.0 86 130-227 105-195 (312)
94 3k6r_A Putative transferase PH 99.1 9.3E-11 3.2E-15 111.7 7.9 95 132-241 118-219 (278)
95 3id6_C Fibrillarin-like rRNA/T 99.1 2.2E-10 7.6E-15 106.3 10.2 108 128-244 60-178 (232)
96 3g5l_A Putative S-adenosylmeth 99.1 2.5E-10 8.5E-15 106.0 10.5 100 131-243 34-141 (253)
97 2pxx_A Uncharacterized protein 99.1 2E-10 7E-15 103.2 9.4 76 140-227 41-117 (215)
98 3dh0_A SAM dependent methyltra 99.1 1.5E-10 5.2E-15 104.9 8.6 102 130-243 26-139 (219)
99 1nt2_A Fibrillarin-like PRE-rR 99.1 1.7E-10 5.9E-15 105.2 9.0 99 137-244 53-158 (210)
100 2o57_A Putative sarcosine dime 99.1 3.8E-10 1.3E-14 107.4 11.7 106 127-244 64-184 (297)
101 3ufb_A Type I restriction-modi 99.1 5.6E-10 1.9E-14 115.7 13.8 173 118-310 195-414 (530)
102 2yvl_A TRMI protein, hypotheti 99.1 5.9E-10 2E-14 103.0 12.4 109 124-244 74-187 (248)
103 1yb2_A Hypothetical protein TA 99.1 2E-10 6.7E-15 108.8 9.3 104 128-244 97-208 (275)
104 2b25_A Hypothetical protein; s 99.1 3.3E-10 1.1E-14 110.4 10.7 110 125-244 89-216 (336)
105 3kkz_A Uncharacterized protein 99.1 7E-10 2.4E-14 104.0 12.6 93 125-229 29-126 (267)
106 1m6y_A S-adenosyl-methyltransf 99.1 2.8E-10 9.7E-15 109.6 10.0 98 124-228 9-109 (301)
107 3u81_A Catechol O-methyltransf 99.1 5.3E-10 1.8E-14 102.2 11.4 137 98-244 19-167 (221)
108 3m33_A Uncharacterized protein 99.1 3.7E-10 1.3E-14 103.6 10.4 102 128-244 36-139 (226)
109 1g8a_A Fibrillarin-like PRE-rR 99.1 2.9E-10 1E-14 104.0 9.7 107 128-243 57-174 (227)
110 3bus_A REBM, methyltransferase 99.1 6.1E-10 2.1E-14 104.5 12.0 90 128-229 48-141 (273)
111 1o54_A SAM-dependent O-methylt 99.1 5.1E-10 1.7E-14 105.9 11.5 107 125-244 96-210 (277)
112 2yqz_A Hypothetical protein TT 99.1 4.7E-10 1.6E-14 104.3 11.1 107 126-244 19-138 (263)
113 3ccf_A Cyclopropane-fatty-acyl 99.1 1.4E-10 4.9E-15 109.6 7.5 99 130-244 46-151 (279)
114 2qm3_A Predicted methyltransfe 99.1 4.5E-10 1.5E-14 111.3 11.4 118 114-243 143-273 (373)
115 3jwh_A HEN1; methyltransferase 99.1 6.9E-10 2.3E-14 100.7 11.7 90 127-228 15-113 (217)
116 1ve3_A Hypothetical protein PH 99.1 5.7E-10 2E-14 101.4 11.1 75 140-226 37-112 (227)
117 2fk8_A Methoxy mycolic acid sy 99.1 9.8E-10 3.4E-14 105.8 13.2 103 128-245 77-192 (318)
118 1wzn_A SAM-dependent methyltra 99.1 6.1E-10 2.1E-14 103.2 11.3 84 128-224 28-112 (252)
119 2fca_A TRNA (guanine-N(7)-)-me 99.1 4.1E-10 1.4E-14 102.7 9.7 95 140-244 37-150 (213)
120 4dmg_A Putative uncharacterize 99.1 2.3E-10 7.7E-15 114.3 8.6 93 123-227 197-290 (393)
121 1xtp_A LMAJ004091AAA; SGPP, st 99.1 5.8E-10 2E-14 103.2 10.8 89 128-228 80-169 (254)
122 2b78_A Hypothetical protein SM 99.1 3.1E-10 1.1E-14 113.1 9.4 97 123-228 195-296 (385)
123 3gu3_A Methyltransferase; alph 99.1 5.9E-10 2E-14 105.8 11.0 109 123-244 3-123 (284)
124 3bkw_A MLL3908 protein, S-aden 99.1 7E-10 2.4E-14 101.9 11.1 99 132-243 34-140 (243)
125 3h2b_A SAM-dependent methyltra 99.1 3.4E-10 1.2E-14 101.5 8.7 71 142-227 42-112 (203)
126 2xvm_A Tellurite resistance pr 99.1 5.4E-10 1.9E-14 99.3 10.0 84 132-228 23-108 (199)
127 1kpg_A CFA synthase;, cyclopro 99.1 1.5E-09 5.1E-14 102.7 13.6 103 128-245 51-166 (287)
128 3g2m_A PCZA361.24; SAM-depende 99.1 4.3E-10 1.5E-14 107.4 9.9 105 126-244 68-187 (299)
129 3lkd_A Type I restriction-modi 99.1 4.4E-10 1.5E-14 116.6 10.5 107 113-229 190-309 (542)
130 2fyt_A Protein arginine N-meth 99.1 4E-10 1.4E-14 110.4 9.7 102 130-244 53-168 (340)
131 3orh_A Guanidinoacetate N-meth 99.0 2.9E-10 9.9E-15 105.4 7.9 105 128-243 48-166 (236)
132 2gpy_A O-methyltransferase; st 99.0 6.2E-10 2.1E-14 102.4 10.1 112 123-243 36-156 (233)
133 2p8j_A S-adenosylmethionine-de 99.0 6.4E-10 2.2E-14 99.9 9.9 109 124-244 5-125 (209)
134 1ixk_A Methyltransferase; open 99.0 2.9E-10 1E-14 110.1 8.0 95 120-227 98-197 (315)
135 3lcc_A Putative methyl chlorid 99.0 4.8E-10 1.6E-14 103.1 8.7 100 130-243 56-167 (235)
136 3l8d_A Methyltransferase; stru 99.0 7E-10 2.4E-14 101.9 9.8 101 128-243 42-149 (242)
137 3duw_A OMT, O-methyltransferas 99.0 1.5E-09 5E-14 98.9 11.8 113 124-243 41-163 (223)
138 2p35_A Trans-aconitate 2-methy 99.0 7.8E-10 2.7E-14 102.7 10.1 88 127-230 19-108 (259)
139 2yx1_A Hypothetical protein MJ 99.0 7.6E-10 2.6E-14 108.2 10.5 89 139-243 193-287 (336)
140 3ou2_A SAM-dependent methyltra 99.0 7.4E-10 2.5E-14 99.9 9.6 83 130-227 34-117 (218)
141 3i9f_A Putative type 11 methyl 99.0 2.4E-10 8.2E-15 99.5 6.2 95 132-244 8-109 (170)
142 3r0q_C Probable protein argini 99.0 4.3E-10 1.5E-14 111.6 8.8 101 130-244 52-166 (376)
143 3dxy_A TRNA (guanine-N(7)-)-me 99.0 3.2E-10 1.1E-14 104.1 7.2 76 141-225 34-113 (218)
144 2pjd_A Ribosomal RNA small sub 99.0 2.6E-10 8.9E-15 111.7 7.0 87 129-229 184-273 (343)
145 3s1s_A Restriction endonucleas 99.0 1.7E-09 5.9E-14 115.1 13.5 117 100-228 275-410 (878)
146 1u2z_A Histone-lysine N-methyl 99.0 9.8E-10 3.3E-14 110.8 11.2 114 117-243 221-355 (433)
147 2ipx_A RRNA 2'-O-methyltransfe 99.0 8.6E-10 2.9E-14 101.5 9.9 100 136-244 72-179 (233)
148 2jjq_A Uncharacterized RNA met 99.0 1E-09 3.4E-14 110.8 11.2 91 125-229 273-365 (425)
149 3q7e_A Protein arginine N-meth 99.0 7.2E-10 2.5E-14 108.9 9.7 95 137-244 62-170 (349)
150 1y8c_A S-adenosylmethionine-de 99.0 1.4E-09 4.8E-14 99.8 11.1 88 128-228 22-113 (246)
151 3tr6_A O-methyltransferase; ce 99.0 6.4E-10 2.2E-14 101.4 8.7 115 123-243 46-170 (225)
152 3ajd_A Putative methyltransfer 99.0 3.5E-10 1.2E-14 107.3 6.9 89 132-228 74-167 (274)
153 1sui_A Caffeoyl-COA O-methyltr 99.0 9.5E-10 3.2E-14 102.8 9.7 117 123-244 61-187 (247)
154 3mgg_A Methyltransferase; NYSG 99.0 7.8E-10 2.7E-14 104.0 9.1 102 130-243 26-138 (276)
155 3tfw_A Putative O-methyltransf 99.0 1.2E-09 3.9E-14 102.1 10.1 111 125-244 47-167 (248)
156 3bkx_A SAM-dependent methyltra 99.0 1.2E-09 3.9E-14 102.7 10.2 91 128-228 30-133 (275)
157 2as0_A Hypothetical protein PH 99.0 5.7E-10 2E-14 111.3 8.5 99 122-229 199-301 (396)
158 3dr5_A Putative O-methyltransf 99.0 1.6E-09 5.4E-14 99.6 10.8 109 125-243 37-159 (221)
159 3thr_A Glycine N-methyltransfe 99.0 5.3E-10 1.8E-14 106.1 7.8 89 127-224 43-137 (293)
160 4htf_A S-adenosylmethionine-de 99.0 1.8E-09 6.3E-14 102.1 11.4 101 131-243 59-169 (285)
161 3e8s_A Putative SAM dependent 99.0 5E-10 1.7E-14 101.4 7.1 87 130-228 41-127 (227)
162 3g5t_A Trans-aconitate 3-methy 99.0 1.7E-09 5.7E-14 103.3 11.0 112 126-244 22-146 (299)
163 3pfg_A N-methyltransferase; N, 99.0 1.1E-09 3.9E-14 102.3 9.6 73 140-228 49-122 (263)
164 3c0k_A UPF0064 protein YCCW; P 99.0 1.1E-09 3.7E-14 109.4 10.1 96 123-228 204-304 (396)
165 3ggd_A SAM-dependent methyltra 99.0 9.8E-10 3.4E-14 101.5 9.0 98 139-244 54-160 (245)
166 1wxx_A TT1595, hypothetical pr 99.0 3.2E-10 1.1E-14 112.7 5.9 96 123-229 194-291 (382)
167 2r6z_A UPF0341 protein in RSP 99.0 2.9E-10 9.9E-15 107.2 5.2 89 133-229 75-173 (258)
168 3cgg_A SAM-dependent methyltra 99.0 1.4E-09 4.9E-14 95.8 9.2 79 132-226 38-116 (195)
169 2p7i_A Hypothetical protein; p 99.0 1.7E-09 6E-14 99.1 10.1 83 130-227 30-113 (250)
170 2y1w_A Histone-arginine methyl 99.0 2.4E-09 8.3E-14 105.0 11.4 87 128-228 37-127 (348)
171 2bm8_A Cephalosporin hydroxyla 99.0 5.8E-10 2E-14 103.6 6.6 107 127-244 67-184 (236)
172 3b3j_A Histone-arginine methyl 99.0 2.1E-09 7E-14 110.1 11.2 84 130-227 147-234 (480)
173 2avd_A Catechol-O-methyltransf 99.0 1.5E-09 5.3E-14 99.1 9.1 116 122-243 50-175 (229)
174 1p91_A Ribosomal RNA large sub 99.0 2.2E-09 7.6E-14 100.6 10.4 90 140-244 84-175 (269)
175 3sm3_A SAM-dependent methyltra 99.0 1.8E-09 6.1E-14 98.4 9.4 77 140-228 29-112 (235)
176 4hc4_A Protein arginine N-meth 99.0 8.1E-10 2.8E-14 109.5 7.5 79 133-225 75-157 (376)
177 2o07_A Spermidine synthase; st 98.9 1.7E-09 5.9E-14 104.3 9.2 95 139-244 93-206 (304)
178 3bwc_A Spermidine synthase; SA 98.9 1.8E-09 6E-14 104.1 9.0 95 125-229 76-181 (304)
179 3c3p_A Methyltransferase; NP_9 98.9 2.4E-09 8.3E-14 96.7 9.5 99 125-235 40-144 (210)
180 2oyr_A UPF0341 protein YHIQ; a 98.9 9.6E-10 3.3E-14 103.6 6.9 89 131-230 76-177 (258)
181 3e23_A Uncharacterized protein 98.9 1.5E-09 5.1E-14 98.0 7.9 81 129-228 33-113 (211)
182 3ckk_A TRNA (guanine-N(7)-)-me 98.9 1.5E-09 5.2E-14 100.7 8.1 79 139-227 44-133 (235)
183 1iy9_A Spermidine synthase; ro 98.9 1.8E-09 6.1E-14 102.6 8.6 94 140-244 74-186 (275)
184 3ocj_A Putative exported prote 98.9 1.9E-09 6.6E-14 103.3 8.9 80 137-229 114-199 (305)
185 1g6q_1 HnRNP arginine N-methyl 98.9 2.5E-09 8.5E-14 104.1 9.7 102 130-244 27-142 (328)
186 2hnk_A SAM-dependent O-methylt 98.9 2.4E-09 8.4E-14 98.9 9.1 121 123-244 42-178 (239)
187 1uir_A Polyamine aminopropyltr 98.9 2.6E-09 9E-14 103.4 9.7 79 140-229 76-163 (314)
188 3mq2_A 16S rRNA methyltransfer 98.9 1.1E-09 3.6E-14 99.5 6.4 70 132-201 18-95 (218)
189 4fsd_A Arsenic methyltransfera 98.9 1.7E-09 5.7E-14 107.5 8.3 100 139-244 81-200 (383)
190 3m4x_A NOL1/NOP2/SUN family pr 98.9 5.7E-10 2E-14 113.3 5.0 96 120-227 85-185 (456)
191 1xdz_A Methyltransferase GIDB; 98.9 1.5E-09 5.1E-14 100.5 7.4 78 140-226 69-150 (240)
192 3d2l_A SAM-dependent methyltra 98.9 5E-09 1.7E-13 96.1 10.9 83 127-225 21-104 (243)
193 3adn_A Spermidine synthase; am 98.9 1.6E-09 5.6E-14 104.0 7.8 77 140-227 82-167 (294)
194 1jsx_A Glucose-inhibited divis 98.9 2.4E-09 8.3E-14 96.1 8.4 85 128-225 49-140 (207)
195 3r3h_A O-methyltransferase, SA 98.9 6.3E-10 2.1E-14 103.7 4.5 116 123-244 42-167 (242)
196 3ll7_A Putative methyltransfer 98.9 1E-09 3.6E-14 109.7 6.3 80 141-230 93-176 (410)
197 3dli_A Methyltransferase; PSI- 98.9 3.1E-09 1.1E-13 98.0 9.1 101 128-244 27-137 (240)
198 2kw5_A SLR1183 protein; struct 98.9 4.2E-09 1.4E-13 94.2 9.6 82 131-227 22-104 (202)
199 2frx_A Hypothetical protein YE 98.9 1.3E-09 4.4E-14 111.6 6.9 97 120-228 95-198 (479)
200 3p2e_A 16S rRNA methylase; met 98.9 6.8E-10 2.3E-14 102.4 4.4 78 140-228 23-108 (225)
201 3v97_A Ribosomal RNA large sub 98.9 4.5E-09 1.5E-13 112.4 11.3 93 124-229 524-621 (703)
202 3lec_A NADB-rossmann superfami 98.9 3.7E-09 1.3E-13 97.8 9.1 85 139-235 19-109 (230)
203 3c3y_A Pfomt, O-methyltransfer 98.9 5.4E-09 1.8E-13 96.9 10.2 99 124-227 53-157 (237)
204 3gnl_A Uncharacterized protein 98.9 4.8E-09 1.6E-13 97.9 9.6 62 139-200 19-85 (244)
205 2ex4_A Adrenal gland protein A 98.9 2E-09 6.7E-14 99.4 7.0 75 141-227 79-156 (241)
206 2pt6_A Spermidine synthase; tr 98.9 3.4E-09 1.1E-13 103.0 8.6 76 140-226 115-198 (321)
207 3v97_A Ribosomal RNA large sub 98.9 4.8E-09 1.6E-13 112.1 10.5 96 124-229 173-315 (703)
208 2vdv_E TRNA (guanine-N(7)-)-me 98.9 4.2E-09 1.4E-13 97.9 8.8 80 139-227 47-138 (246)
209 3fzg_A 16S rRNA methylase; met 98.9 3E-09 1E-13 95.4 7.3 100 128-242 38-147 (200)
210 2gs9_A Hypothetical protein TT 98.9 7.9E-09 2.7E-13 93.0 10.2 94 132-244 28-129 (211)
211 1ri5_A MRNA capping enzyme; me 98.9 1.1E-08 3.7E-13 96.8 11.6 79 139-228 62-144 (298)
212 2avn_A Ubiquinone/menaquinone 98.9 7.9E-09 2.7E-13 96.6 10.5 88 141-244 54-149 (260)
213 1sqg_A SUN protein, FMU protei 98.9 2E-09 6.8E-14 108.6 6.7 95 125-229 230-327 (429)
214 1inl_A Spermidine synthase; be 98.9 3.5E-09 1.2E-13 101.6 8.2 78 140-228 89-174 (296)
215 3g07_A 7SK snRNA methylphospha 98.9 3.2E-09 1.1E-13 101.4 7.6 44 141-184 46-91 (292)
216 3g89_A Ribosomal RNA small sub 98.9 3.3E-09 1.1E-13 99.3 7.4 77 140-225 79-159 (249)
217 3kr9_A SAM-dependent methyltra 98.8 7.2E-09 2.5E-13 95.6 9.4 61 139-199 13-78 (225)
218 3htx_A HEN1; HEN1, small RNA m 98.8 7.1E-09 2.4E-13 110.6 10.2 89 128-228 708-807 (950)
219 3m6w_A RRNA methylase; rRNA me 98.8 1.3E-09 4.5E-14 110.8 4.4 88 130-228 90-181 (464)
220 3bzb_A Uncharacterized protein 98.8 1.5E-08 5E-13 96.4 11.4 96 128-229 66-176 (281)
221 4azs_A Methyltransferase WBDD; 98.8 6E-09 2E-13 108.9 9.0 78 140-227 65-144 (569)
222 1xj5_A Spermidine synthase 1; 98.8 4.3E-09 1.5E-13 102.8 7.4 78 139-226 118-203 (334)
223 2i7c_A Spermidine synthase; tr 98.8 9.2E-09 3.2E-13 98.0 9.0 78 139-227 76-161 (283)
224 3cbg_A O-methyltransferase; cy 98.8 1.1E-08 3.9E-13 94.2 9.4 96 124-227 55-158 (232)
225 2b2c_A Spermidine synthase; be 98.8 5.6E-09 1.9E-13 101.2 7.5 77 140-227 107-191 (314)
226 2b9e_A NOL1/NOP2/SUN domain fa 98.8 1.5E-08 5.1E-13 98.0 10.2 88 132-228 93-185 (309)
227 3bgv_A MRNA CAP guanine-N7 met 98.8 1.4E-08 4.8E-13 97.6 9.9 97 128-230 19-127 (313)
228 1mjf_A Spermidine synthase; sp 98.8 9.9E-09 3.4E-13 97.7 8.5 77 140-228 74-163 (281)
229 2qe6_A Uncharacterized protein 98.8 2.6E-08 9E-13 94.4 11.2 117 127-244 62-193 (274)
230 3bxo_A N,N-dimethyltransferase 98.8 2.8E-08 9.5E-13 90.8 10.9 68 140-223 39-106 (239)
231 2cmg_A Spermidine synthase; tr 98.8 3.2E-09 1.1E-13 100.3 4.5 90 140-244 71-168 (262)
232 1ej0_A FTSJ; methyltransferase 98.8 6.5E-09 2.2E-13 89.8 6.2 86 131-229 11-100 (180)
233 2yxl_A PH0851 protein, 450AA l 98.8 8.3E-09 2.8E-13 104.8 7.8 88 131-228 249-341 (450)
234 2i62_A Nicotinamide N-methyltr 98.8 1.2E-08 4.2E-13 94.7 8.4 83 138-228 53-168 (265)
235 3dou_A Ribosomal RNA large sub 98.8 2.4E-08 8E-13 89.6 9.8 81 139-229 23-103 (191)
236 2plw_A Ribosomal RNA methyltra 98.8 2.1E-08 7.2E-13 89.5 9.0 87 133-229 13-118 (201)
237 2a14_A Indolethylamine N-methy 98.7 5.3E-09 1.8E-13 98.3 5.1 99 138-244 52-194 (263)
238 3gjy_A Spermidine synthase; AP 98.7 2.4E-08 8.2E-13 96.6 9.4 74 143-226 91-168 (317)
239 1wg8_A Predicted S-adenosylmet 98.7 3.2E-08 1.1E-12 93.6 9.8 95 125-228 6-100 (285)
240 3hp7_A Hemolysin, putative; st 98.7 2.4E-08 8.2E-13 95.6 8.6 104 129-244 72-182 (291)
241 3cc8_A Putative methyltransfer 98.7 4.7E-08 1.6E-12 88.4 9.1 81 131-227 23-103 (230)
242 2dul_A N(2),N(2)-dimethylguano 98.7 3.9E-08 1.3E-12 97.6 8.9 89 141-241 47-158 (378)
243 2vdw_A Vaccinia virus capping 98.7 2.3E-08 7.8E-13 96.3 7.0 100 141-244 48-166 (302)
244 4e2x_A TCAB9; kijanose, tetron 98.7 1.1E-08 3.8E-13 102.3 4.3 104 127-244 93-205 (416)
245 2wa2_A Non-structural protein 98.7 1.1E-08 3.7E-13 97.4 4.0 80 131-226 72-157 (276)
246 3opn_A Putative hemolysin; str 98.6 7.7E-09 2.6E-13 95.8 2.5 109 128-244 23-134 (232)
247 2r3s_A Uncharacterized protein 98.6 1.1E-07 3.9E-12 91.8 10.7 91 128-232 150-248 (335)
248 2oxt_A Nucleoside-2'-O-methylt 98.6 1.3E-08 4.5E-13 96.2 4.0 81 130-226 63-149 (265)
249 2g72_A Phenylethanolamine N-me 98.6 6.3E-08 2.2E-12 91.8 8.7 93 130-229 58-186 (289)
250 3frh_A 16S rRNA methylase; met 98.6 6.4E-08 2.2E-12 89.8 8.2 76 140-229 104-180 (253)
251 1qzz_A RDMB, aclacinomycin-10- 98.6 8.3E-08 2.8E-12 94.3 9.4 87 130-231 171-263 (374)
252 1x19_A CRTF-related protein; m 98.6 1.1E-07 3.8E-12 93.2 9.7 89 128-231 177-271 (359)
253 2nyu_A Putative ribosomal RNA 98.6 1.2E-07 4.1E-12 84.1 8.8 77 139-228 20-108 (196)
254 3axs_A Probable N(2),N(2)-dime 98.6 8E-08 2.7E-12 95.7 8.2 90 140-241 51-152 (392)
255 2p41_A Type II methyltransfera 98.6 2.1E-08 7.1E-13 96.8 3.4 79 133-228 74-159 (305)
256 2aot_A HMT, histamine N-methyl 98.5 5.8E-08 2E-12 92.4 5.5 99 140-244 51-169 (292)
257 1tw3_A COMT, carminomycin 4-O- 98.5 1.8E-07 6.1E-12 91.5 8.6 86 131-231 173-264 (360)
258 3lcv_B Sisomicin-gentamicin re 98.5 1E-07 3.6E-12 89.2 6.1 85 129-228 122-209 (281)
259 3gwz_A MMCR; methyltransferase 98.5 4.9E-07 1.7E-11 89.1 11.1 87 130-231 191-283 (369)
260 2ip2_A Probable phenazine-spec 98.5 2.7E-07 9.2E-12 89.3 8.9 87 129-231 156-248 (334)
261 3mcz_A O-methyltransferase; ad 98.5 2.2E-07 7.4E-12 90.6 7.9 88 132-231 169-263 (352)
262 3dp7_A SAM-dependent methyltra 98.5 6.4E-07 2.2E-11 88.0 11.2 80 140-231 178-263 (363)
263 3i53_A O-methyltransferase; CO 98.4 3.9E-07 1.3E-11 88.2 8.4 84 134-232 162-251 (332)
264 2qfm_A Spermine synthase; sper 98.4 4.1E-07 1.4E-11 89.3 8.5 79 141-227 188-277 (364)
265 3cvo_A Methyltransferase-like 98.4 7.2E-07 2.5E-11 80.8 9.3 73 123-199 14-92 (202)
266 1vlm_A SAM-dependent methyltra 98.4 3.9E-07 1.3E-11 82.6 7.6 66 142-228 48-113 (219)
267 1af7_A Chemotaxis receptor met 98.3 1.2E-06 4.2E-11 83.1 8.6 91 123-224 86-220 (274)
268 2zfu_A Nucleomethylin, cerebra 98.3 3.7E-07 1.3E-11 82.3 4.7 85 131-243 56-147 (215)
269 2k4m_A TR8_protein, UPF0146 pr 98.3 8.4E-07 2.9E-11 75.7 5.9 88 125-238 21-111 (153)
270 3giw_A Protein of unknown func 98.3 3.5E-06 1.2E-10 79.8 10.8 74 127-200 63-144 (277)
271 3sso_A Methyltransferase; macr 98.2 4.3E-06 1.5E-10 83.0 9.2 86 127-226 203-297 (419)
272 3reo_A (ISO)eugenol O-methyltr 98.2 2.1E-06 7.1E-11 84.6 6.8 63 131-198 192-257 (368)
273 2xyq_A Putative 2'-O-methyl tr 98.2 2.8E-06 9.4E-11 81.2 7.4 73 130-228 47-134 (290)
274 1fp1_D Isoliquiritigenin 2'-O- 98.1 2.7E-06 9.1E-11 83.8 7.1 78 131-228 198-278 (372)
275 2zig_A TTHA0409, putative modi 98.1 4.5E-06 1.6E-10 79.8 8.0 60 125-185 220-279 (297)
276 3lst_A CALO1 methyltransferase 98.1 4E-06 1.4E-10 81.7 7.8 84 130-231 173-262 (348)
277 1fp2_A Isoflavone O-methyltran 98.1 3.2E-06 1.1E-10 82.5 6.9 74 138-231 185-261 (352)
278 3p9c_A Caffeic acid O-methyltr 98.1 4.8E-06 1.6E-10 81.9 7.7 64 130-198 189-255 (364)
279 4a6d_A Hydroxyindole O-methylt 98.1 1.8E-05 6E-10 77.5 10.9 87 131-232 169-260 (353)
280 2oo3_A Protein involved in cat 98.0 6.4E-07 2.2E-11 84.8 -0.2 81 142-230 92-172 (283)
281 1zg3_A Isoflavanone 4'-O-methy 98.0 6.1E-06 2.1E-10 80.7 5.5 80 132-231 182-266 (358)
282 3tka_A Ribosomal RNA small sub 97.9 1.8E-05 6.2E-10 76.6 8.4 97 124-228 40-139 (347)
283 4gqb_A Protein arginine N-meth 97.9 8.7E-06 3E-10 85.4 5.6 71 141-225 357-436 (637)
284 4auk_A Ribosomal RNA large sub 97.9 2.7E-05 9.2E-10 76.4 8.7 74 139-229 209-282 (375)
285 3o4f_A Spermidine synthase; am 97.8 0.0001 3.5E-09 70.2 11.6 92 125-227 64-167 (294)
286 1g60_A Adenine-specific methyl 97.8 4.7E-05 1.6E-09 71.3 8.3 61 124-185 196-256 (260)
287 4fzv_A Putative methyltransfer 97.8 2.4E-05 8.1E-10 76.9 6.2 87 131-228 138-234 (359)
288 3ua3_A Protein arginine N-meth 97.7 5E-05 1.7E-09 80.0 8.1 78 142-226 410-504 (745)
289 2ld4_A Anamorsin; methyltransf 97.7 1.9E-05 6.4E-10 68.8 3.8 82 137-243 8-97 (176)
290 2qy6_A UPF0209 protein YFCK; s 97.5 8.4E-05 2.9E-09 69.6 4.8 97 140-243 59-209 (257)
291 1g55_A DNA cytosine methyltran 97.4 0.00013 4.3E-09 71.2 6.0 73 143-227 3-78 (343)
292 2c7p_A Modification methylase 97.4 0.00043 1.5E-08 67.1 9.4 71 142-228 11-82 (327)
293 3g7u_A Cytosine-specific methy 97.4 0.0003 1E-08 69.5 8.3 77 143-226 3-80 (376)
294 3c6k_A Spermine synthase; sper 97.2 0.00066 2.3E-08 66.8 8.2 78 141-226 205-293 (381)
295 2qrv_A DNA (cytosine-5)-methyl 97.0 0.0021 7.1E-08 61.3 9.4 77 140-227 14-93 (295)
296 1boo_A Protein (N-4 cytosine-s 96.9 0.00038 1.3E-08 67.2 3.4 74 124-198 236-310 (323)
297 3qv2_A 5-cytosine DNA methyltr 96.9 0.0016 5.4E-08 63.1 7.0 72 142-226 10-85 (327)
298 4h0n_A DNMT2; SAH binding, tra 96.8 0.0016 5.5E-08 63.2 6.5 72 143-226 4-78 (333)
299 3ubt_Y Modification methylase 96.8 0.0027 9.2E-08 60.9 7.8 68 144-226 2-70 (331)
300 3evf_A RNA-directed RNA polyme 96.7 0.00054 1.9E-08 64.4 2.4 84 132-228 65-151 (277)
301 3gcz_A Polyprotein; flavivirus 96.7 0.0006 2E-08 64.2 2.6 86 131-228 80-167 (282)
302 3p8z_A Mtase, non-structural p 96.5 0.0048 1.6E-07 56.6 7.0 86 130-230 67-157 (267)
303 1eg2_A Modification methylase 96.5 0.0043 1.5E-07 59.7 7.1 63 124-187 226-291 (319)
304 2wk1_A NOVP; transferase, O-me 96.5 0.0075 2.6E-07 57.1 8.4 77 140-226 105-218 (282)
305 2py6_A Methyltransferase FKBM; 96.4 0.0048 1.7E-07 61.4 7.1 59 139-197 224-292 (409)
306 3me5_A Cytosine-specific methy 96.4 0.0039 1.3E-07 63.4 6.4 82 143-226 89-178 (482)
307 3lkz_A Non-structural protein 96.3 0.0044 1.5E-07 58.6 5.6 83 130-227 83-170 (321)
308 3b5i_A S-adenosyl-L-methionine 95.7 0.03 1E-06 55.0 9.0 91 129-231 35-164 (374)
309 2px2_A Genome polyprotein [con 95.5 0.0075 2.6E-07 56.0 3.3 80 132-228 64-150 (269)
310 3eld_A Methyltransferase; flav 94.9 0.016 5.6E-07 54.8 3.8 43 132-174 72-116 (300)
311 1zkd_A DUF185; NESG, RPR58, st 94.1 0.23 7.9E-06 48.9 10.1 71 122-192 50-140 (387)
312 3swr_A DNA (cytosine-5)-methyl 93.9 0.089 3.1E-06 57.9 7.4 81 143-226 541-627 (1002)
313 2efj_A 3,7-dimethylxanthine me 93.6 0.11 3.9E-06 51.0 6.8 21 142-162 53-73 (384)
314 4dkj_A Cytosine-specific methy 93.4 0.086 2.9E-06 52.3 5.7 43 143-185 11-60 (403)
315 3ic5_A Putative saccharopine d 93.2 0.46 1.6E-05 37.1 8.9 85 142-242 5-94 (118)
316 4fn4_A Short chain dehydrogena 92.8 0.4 1.4E-05 44.3 9.1 83 141-225 6-92 (254)
317 3fwz_A Inner membrane protein 92.8 0.83 2.8E-05 37.6 10.2 75 142-229 7-83 (140)
318 1pqw_A Polyketide synthase; ro 92.3 0.25 8.7E-06 43.0 6.7 46 136-181 33-81 (198)
319 4ft4_B DNA (cytosine-5)-methyl 92.3 0.22 7.5E-06 53.5 7.4 55 142-199 212-273 (784)
320 3qiv_A Short-chain dehydrogena 92.1 0.56 1.9E-05 42.4 8.9 84 141-226 8-95 (253)
321 3lyl_A 3-oxoacyl-(acyl-carrier 91.9 0.74 2.5E-05 41.4 9.5 84 141-226 4-91 (247)
322 3llv_A Exopolyphosphatase-rela 91.7 0.61 2.1E-05 38.1 8.0 72 142-226 6-79 (141)
323 3imf_A Short chain dehydrogena 91.7 0.63 2.2E-05 42.4 8.9 83 141-225 5-91 (257)
324 3ucx_A Short chain dehydrogena 91.7 0.89 3.1E-05 41.5 9.9 83 141-225 10-96 (264)
325 3r24_A NSP16, 2'-O-methyl tran 91.6 0.7 2.4E-05 43.7 9.0 79 128-229 91-181 (344)
326 3grk_A Enoyl-(acyl-carrier-pro 91.6 0.67 2.3E-05 43.3 9.1 85 140-226 29-118 (293)
327 3av4_A DNA (cytosine-5)-methyl 91.6 0.3 1E-05 55.3 7.5 82 142-226 851-938 (1330)
328 3tjr_A Short chain dehydrogena 91.3 0.73 2.5E-05 43.2 9.1 84 141-226 30-117 (301)
329 3h7a_A Short chain dehydrogena 91.3 0.51 1.7E-05 43.0 7.7 83 141-226 6-92 (252)
330 3rkr_A Short chain oxidoreduct 90.9 0.71 2.4E-05 42.1 8.4 84 140-226 27-115 (262)
331 3o26_A Salutaridine reductase; 90.9 0.85 2.9E-05 42.2 9.1 84 141-226 11-100 (311)
332 3sju_A Keto reductase; short-c 90.9 0.92 3.1E-05 41.9 9.2 83 141-226 23-110 (279)
333 3o38_A Short chain dehydrogena 90.8 0.97 3.3E-05 41.1 9.2 84 141-226 21-110 (266)
334 3j20_O 30S ribosomal protein S 90.8 0.52 1.8E-05 39.9 6.5 58 334-396 17-78 (148)
335 3fpc_A NADP-dependent alcohol 90.8 1.2 4E-05 42.7 10.1 102 132-243 157-262 (352)
336 3m6i_A L-arabinitol 4-dehydrog 90.5 1.6 5.5E-05 41.8 10.9 103 134-243 172-279 (363)
337 2b4q_A Rhamnolipids biosynthes 90.5 1 3.4E-05 41.6 9.0 83 141-226 28-114 (276)
338 3k31_A Enoyl-(acyl-carrier-pro 90.4 0.48 1.6E-05 44.3 6.9 84 141-226 29-117 (296)
339 3uf0_A Short-chain dehydrogena 90.2 1 3.5E-05 41.5 8.9 82 141-225 30-114 (273)
340 3gaf_A 7-alpha-hydroxysteroid 90.2 0.94 3.2E-05 41.2 8.5 83 141-225 11-97 (256)
341 3v8b_A Putative dehydrogenase, 90.1 1.3 4.6E-05 40.9 9.7 84 141-226 27-114 (283)
342 2dph_A Formaldehyde dismutase; 90.1 0.55 1.9E-05 45.9 7.2 49 133-181 177-228 (398)
343 3uog_A Alcohol dehydrogenase; 90.1 1.2 4.1E-05 42.9 9.5 99 135-243 183-283 (363)
344 3gms_A Putative NADPH:quinone 90.0 0.5 1.7E-05 45.1 6.7 51 132-182 135-188 (340)
345 3svt_A Short-chain type dehydr 90.0 1.3 4.4E-05 40.8 9.3 83 141-225 10-99 (281)
346 3two_A Mannitol dehydrogenase; 89.9 0.69 2.3E-05 44.2 7.6 91 133-243 168-261 (348)
347 2jah_A Clavulanic acid dehydro 89.6 1.4 4.8E-05 39.8 9.1 82 141-225 6-92 (247)
348 4e6p_A Probable sorbitol dehyd 89.6 1.9 6.5E-05 39.1 10.1 81 141-226 7-91 (259)
349 3tox_A Short chain dehydrogena 89.4 0.77 2.6E-05 42.6 7.3 83 141-225 7-93 (280)
350 1iy8_A Levodione reductase; ox 89.4 1.4 4.9E-05 40.1 9.1 82 141-225 12-100 (267)
351 2xzm_M RPS18E; ribosome, trans 89.4 0.77 2.6E-05 39.1 6.6 58 334-396 24-85 (155)
352 2bgk_A Rhizome secoisolaricire 89.4 1.7 5.9E-05 39.5 9.7 82 141-225 15-100 (278)
353 3pk0_A Short-chain dehydrogena 89.4 1.3 4.3E-05 40.5 8.7 83 141-225 9-96 (262)
354 3uve_A Carveol dehydrogenase ( 89.3 1.6 5.4E-05 40.3 9.4 83 141-225 10-112 (286)
355 3tfo_A Putative 3-oxoacyl-(acy 89.3 1.1 3.9E-05 41.1 8.3 82 142-225 4-89 (264)
356 1yb1_A 17-beta-hydroxysteroid 89.2 1.8 6.1E-05 39.6 9.6 82 141-226 30-117 (272)
357 4fs3_A Enoyl-[acyl-carrier-pro 89.2 0.99 3.4E-05 41.2 7.8 84 141-227 5-96 (256)
358 3r1i_A Short-chain type dehydr 89.1 0.84 2.9E-05 42.2 7.3 83 141-225 31-117 (276)
359 2rhc_B Actinorhodin polyketide 89.1 1.8 6.3E-05 39.7 9.7 81 141-225 21-107 (277)
360 4b7c_A Probable oxidoreductase 89.0 0.23 7.8E-06 47.3 3.4 49 135-183 143-194 (336)
361 1zk4_A R-specific alcohol dehy 89.0 1.6 5.3E-05 39.1 8.9 83 141-226 5-91 (251)
362 3n74_A 3-ketoacyl-(acyl-carrie 88.8 1.9 6.4E-05 39.0 9.4 82 141-226 8-92 (261)
363 3r8n_M 30S ribosomal protein S 88.8 0.88 3E-05 36.8 6.2 48 334-386 10-59 (114)
364 4ibo_A Gluconate dehydrogenase 88.8 0.88 3E-05 41.9 7.2 84 141-226 25-112 (271)
365 3gvc_A Oxidoreductase, probabl 88.8 1.4 4.8E-05 40.7 8.7 82 141-226 28-112 (277)
366 3nyw_A Putative oxidoreductase 88.8 1.1 3.7E-05 40.7 7.7 84 141-226 6-96 (250)
367 3lf2_A Short chain oxidoreduct 88.8 1.7 5.8E-05 39.6 9.1 84 141-226 7-96 (265)
368 3sx2_A Putative 3-ketoacyl-(ac 88.7 1.3 4.4E-05 40.6 8.3 83 141-225 12-110 (278)
369 2ae2_A Protein (tropinone redu 88.7 2 6.8E-05 38.9 9.5 84 141-226 8-96 (260)
370 1f8f_A Benzyl alcohol dehydrog 88.7 0.7 2.4E-05 44.6 6.7 48 135-182 184-234 (371)
371 1xkq_A Short-chain reductase f 88.7 1.5 5.1E-05 40.3 8.7 82 141-225 5-94 (280)
372 1zem_A Xylitol dehydrogenase; 88.6 2 6.7E-05 39.1 9.4 81 141-225 6-92 (262)
373 3ppi_A 3-hydroxyacyl-COA dehyd 88.6 1.8 6.2E-05 39.7 9.2 79 141-224 29-110 (281)
374 3awd_A GOX2181, putative polyo 88.5 1.8 6.2E-05 38.9 9.1 81 141-225 12-98 (260)
375 1rjd_A PPM1P, carboxy methyl t 88.5 2.2 7.6E-05 40.9 10.0 62 140-201 96-181 (334)
376 2eih_A Alcohol dehydrogenase; 88.5 1.5 5.2E-05 41.7 8.9 96 137-242 162-260 (343)
377 4egf_A L-xylulose reductase; s 88.4 1.6 5.3E-05 39.9 8.6 83 141-225 19-106 (266)
378 4da9_A Short-chain dehydrogena 88.4 2.1 7.1E-05 39.5 9.5 85 140-226 27-116 (280)
379 4g81_D Putative hexonate dehyd 88.4 1.2 4E-05 41.1 7.7 83 141-225 8-94 (255)
380 3zv4_A CIS-2,3-dihydrobiphenyl 88.3 1.9 6.6E-05 39.7 9.3 81 141-225 4-87 (281)
381 3pgx_A Carveol dehydrogenase; 88.3 2.1 7E-05 39.4 9.4 85 140-226 13-114 (280)
382 1geg_A Acetoin reductase; SDR 88.3 2.2 7.6E-05 38.5 9.5 80 142-225 2-87 (256)
383 3s2e_A Zinc-containing alcohol 88.1 1.1 3.7E-05 42.6 7.6 50 133-182 158-209 (340)
384 3rwb_A TPLDH, pyridoxal 4-dehy 88.1 1.6 5.4E-05 39.4 8.4 82 141-226 5-89 (247)
385 1ae1_A Tropinone reductase-I; 88.1 2.4 8.1E-05 38.8 9.7 84 141-226 20-108 (273)
386 3t7c_A Carveol dehydrogenase; 88.1 1.8 6.3E-05 40.3 9.1 83 141-225 27-125 (299)
387 3pxx_A Carveol dehydrogenase; 88.1 1.9 6.5E-05 39.5 9.0 83 141-226 9-108 (287)
388 3ai3_A NADPH-sorbose reductase 88.0 2.1 7.1E-05 38.8 9.2 82 141-226 6-94 (263)
389 3iz6_M 40S ribosomal protein S 88.0 1 3.5E-05 38.3 6.4 58 334-396 22-83 (152)
390 4eso_A Putative oxidoreductase 88.0 1.9 6.6E-05 39.1 8.9 81 141-225 7-90 (255)
391 4fgs_A Probable dehydrogenase 88.0 1.9 6.5E-05 40.2 8.9 81 141-225 28-111 (273)
392 3cxt_A Dehydrogenase with diff 88.0 2.1 7.2E-05 39.8 9.3 81 141-225 33-119 (291)
393 1cdo_A Alcohol dehydrogenase; 87.8 1.7 6E-05 41.8 8.9 48 134-181 185-235 (374)
394 4eye_A Probable oxidoreductase 87.7 1.3 4.4E-05 42.2 7.8 98 135-243 153-253 (342)
395 4iin_A 3-ketoacyl-acyl carrier 87.6 1.7 6E-05 39.7 8.4 84 141-226 28-116 (271)
396 4imr_A 3-oxoacyl-(acyl-carrier 87.5 1.2 4.2E-05 41.0 7.3 83 141-226 32-118 (275)
397 3rih_A Short chain dehydrogena 87.5 1.2 4.2E-05 41.5 7.4 82 141-225 40-127 (293)
398 3ioy_A Short-chain dehydrogena 87.4 2 6.8E-05 40.6 8.9 83 141-225 7-95 (319)
399 3l6e_A Oxidoreductase, short-c 87.4 2.4 8.3E-05 37.9 9.1 81 142-226 3-86 (235)
400 3ftp_A 3-oxoacyl-[acyl-carrier 87.4 1.3 4.4E-05 40.8 7.3 83 141-225 27-113 (270)
401 1pl8_A Human sorbitol dehydrog 87.3 1.3 4.6E-05 42.4 7.7 49 134-182 164-215 (356)
402 4f3n_A Uncharacterized ACR, CO 87.3 0.8 2.7E-05 45.6 6.1 64 121-184 109-187 (432)
403 3jyn_A Quinone oxidoreductase; 87.3 1.7 5.8E-05 41.0 8.3 97 135-241 134-233 (325)
404 3qwb_A Probable quinone oxidor 87.3 1.8 6.1E-05 41.0 8.5 98 136-243 143-243 (334)
405 3ek2_A Enoyl-(acyl-carrier-pro 87.2 1.3 4.5E-05 40.1 7.3 85 140-226 12-101 (271)
406 1yxm_A Pecra, peroxisomal tran 87.2 2.3 8E-05 39.3 9.1 82 141-226 17-109 (303)
407 3s55_A Putative short-chain de 87.0 2.4 8.1E-05 38.9 9.0 84 141-226 9-108 (281)
408 3abi_A Putative uncharacterize 87.0 1.4 4.8E-05 42.5 7.7 87 142-243 16-103 (365)
409 3op4_A 3-oxoacyl-[acyl-carrier 87.0 2.1 7.3E-05 38.6 8.5 81 141-225 8-91 (248)
410 3tsc_A Putative oxidoreductase 86.9 2.5 8.5E-05 38.7 9.1 83 141-225 10-109 (277)
411 2zat_A Dehydrogenase/reductase 86.9 2.2 7.4E-05 38.6 8.5 81 141-225 13-99 (260)
412 1p0f_A NADP-dependent alcohol 86.9 1.9 6.6E-05 41.5 8.6 48 134-181 184-234 (373)
413 4dqx_A Probable oxidoreductase 86.8 2.8 9.5E-05 38.6 9.4 82 141-226 26-110 (277)
414 2gdz_A NAD+-dependent 15-hydro 86.8 2.5 8.7E-05 38.3 9.0 82 141-226 6-95 (267)
415 3l77_A Short-chain alcohol deh 86.8 2.3 7.7E-05 37.8 8.5 83 142-226 2-89 (235)
416 1fmc_A 7 alpha-hydroxysteroid 86.8 1.9 6.5E-05 38.6 8.0 83 141-226 10-97 (255)
417 2cfc_A 2-(R)-hydroxypropyl-COM 86.6 2.9 0.0001 37.2 9.2 80 142-225 2-88 (250)
418 1xu9_A Corticosteroid 11-beta- 86.6 1.6 5.6E-05 40.1 7.7 81 141-224 27-113 (286)
419 2fzw_A Alcohol dehydrogenase c 86.6 2.2 7.6E-05 40.9 8.9 49 134-182 183-234 (373)
420 1w6u_A 2,4-dienoyl-COA reducta 86.6 3.1 0.0001 38.4 9.6 82 141-226 25-113 (302)
421 1qor_A Quinone oxidoreductase; 86.5 1.8 6.3E-05 40.7 8.1 96 136-241 135-233 (327)
422 2jhf_A Alcohol dehydrogenase E 86.5 2.2 7.5E-05 41.1 8.8 48 134-181 184-234 (374)
423 3oig_A Enoyl-[acyl-carrier-pro 86.5 2.3 8E-05 38.5 8.6 84 141-226 6-96 (266)
424 2nwq_A Probable short-chain de 86.5 2.5 8.6E-05 38.8 8.9 81 143-226 22-106 (272)
425 2uvd_A 3-oxoacyl-(acyl-carrier 86.5 2.2 7.7E-05 38.2 8.4 82 142-226 4-91 (246)
426 2z1n_A Dehydrogenase; reductas 86.5 3 0.0001 37.7 9.3 82 141-226 6-94 (260)
427 4dyv_A Short-chain dehydrogena 86.4 2.1 7.2E-05 39.4 8.3 82 141-226 27-111 (272)
428 4dmm_A 3-oxoacyl-[acyl-carrier 86.3 2.2 7.6E-05 39.0 8.4 83 141-225 27-114 (269)
429 2vqe_M 30S ribosomal protein S 86.3 0.72 2.5E-05 37.9 4.3 52 334-390 11-64 (126)
430 2a4k_A 3-oxoacyl-[acyl carrier 86.3 2.6 8.7E-05 38.5 8.7 80 141-225 5-88 (263)
431 1xhl_A Short-chain dehydrogena 86.2 2.2 7.5E-05 39.8 8.4 82 141-226 25-115 (297)
432 3f1l_A Uncharacterized oxidore 86.2 2.1 7E-05 38.7 8.0 83 141-225 11-100 (252)
433 3oec_A Carveol dehydrogenase ( 86.2 2.3 7.7E-05 40.1 8.5 82 141-225 45-143 (317)
434 3u5c_S 40S ribosomal protein S 86.1 0.75 2.6E-05 38.8 4.4 58 334-396 24-85 (146)
435 3ged_A Short-chain dehydrogena 86.1 2.2 7.5E-05 39.1 8.1 77 143-225 3-83 (247)
436 3grp_A 3-oxoacyl-(acyl carrier 86.0 2.7 9.4E-05 38.4 8.8 82 141-226 26-110 (266)
437 3f9i_A 3-oxoacyl-[acyl-carrier 86.0 3.3 0.00011 37.0 9.2 79 140-226 12-93 (249)
438 3oid_A Enoyl-[acyl-carrier-pro 86.0 2.7 9.4E-05 38.1 8.8 83 141-225 3-90 (258)
439 4fc7_A Peroxisomal 2,4-dienoyl 85.9 2.6 9E-05 38.6 8.7 83 141-225 26-113 (277)
440 3ijr_A Oxidoreductase, short c 85.9 2.6 8.7E-05 39.1 8.6 82 141-225 46-133 (291)
441 1spx_A Short-chain reductase f 85.9 2.6 9E-05 38.4 8.6 82 141-226 5-95 (278)
442 3a28_C L-2.3-butanediol dehydr 85.8 2.4 8.2E-05 38.3 8.2 81 142-226 2-90 (258)
443 1wly_A CAAR, 2-haloacrylate re 85.8 2.9 9.8E-05 39.5 9.1 97 136-242 140-239 (333)
444 3nrc_A Enoyl-[acyl-carrier-pro 85.7 2.3 8E-05 39.0 8.2 85 140-227 24-113 (280)
445 2c07_A 3-oxoacyl-(acyl-carrier 85.6 3.3 0.00011 38.1 9.2 83 141-226 43-130 (285)
446 3l4b_C TRKA K+ channel protien 85.6 1.8 6E-05 38.3 7.1 70 145-228 3-76 (218)
447 1e3i_A Alcohol dehydrogenase, 85.5 2.4 8.4E-05 40.8 8.6 48 134-181 188-238 (376)
448 3uko_A Alcohol dehydrogenase c 85.5 2 6.9E-05 41.4 8.0 49 133-181 185-236 (378)
449 1kol_A Formaldehyde dehydrogen 85.5 1.9 6.3E-05 42.0 7.7 49 134-182 178-229 (398)
450 1gee_A Glucose 1-dehydrogenase 85.4 2.6 8.9E-05 37.9 8.2 81 141-225 6-93 (261)
451 1xg5_A ARPG836; short chain de 85.3 3.2 0.00011 37.9 8.9 82 141-226 31-120 (279)
452 2pnf_A 3-oxoacyl-[acyl-carrier 85.3 3.5 0.00012 36.6 9.0 82 141-226 6-94 (248)
453 3edm_A Short chain dehydrogena 85.2 2.4 8.1E-05 38.5 7.9 83 141-225 7-94 (259)
454 2qq5_A DHRS1, dehydrogenase/re 85.1 2.7 9.2E-05 38.1 8.2 83 141-225 4-91 (260)
455 3tzq_B Short-chain type dehydr 85.0 2.1 7.1E-05 39.2 7.4 82 141-226 10-94 (271)
456 3i1j_A Oxidoreductase, short c 84.9 2.9 9.8E-05 37.3 8.2 85 141-226 13-103 (247)
457 3dii_A Short-chain dehydrogena 84.9 2.7 9.3E-05 37.8 8.1 79 142-225 2-83 (247)
458 4dry_A 3-oxoacyl-[acyl-carrier 84.9 1.6 5.5E-05 40.3 6.7 84 141-226 32-120 (281)
459 3c85_A Putative glutathione-re 84.9 5.4 0.00019 33.9 9.7 74 142-227 39-115 (183)
460 1e3j_A NADP(H)-dependent ketos 84.7 2.2 7.4E-05 40.7 7.7 49 134-182 161-211 (352)
461 4g65_A TRK system potassium up 84.7 1.4 4.7E-05 44.2 6.5 52 143-200 4-59 (461)
462 1yde_A Retinal dehydrogenase/r 84.7 3.8 0.00013 37.5 9.1 79 141-225 8-90 (270)
463 3v2h_A D-beta-hydroxybutyrate 84.7 4.2 0.00014 37.4 9.4 84 141-226 24-113 (281)
464 1vl8_A Gluconate 5-dehydrogena 84.6 3 0.0001 38.0 8.4 82 141-226 20-108 (267)
465 2uyo_A Hypothetical protein ML 84.6 5.8 0.0002 37.5 10.5 56 142-198 103-164 (310)
466 2bd0_A Sepiapterin reductase; 84.5 4.1 0.00014 36.1 9.1 81 142-225 2-94 (244)
467 4dup_A Quinone oxidoreductase; 84.5 2.6 9E-05 40.2 8.2 97 135-242 161-260 (353)
468 4gkb_A 3-oxoacyl-[acyl-carrier 84.5 1.8 6.1E-05 39.9 6.7 82 141-225 6-91 (258)
469 1hxh_A 3BETA/17BETA-hydroxyste 84.4 3 0.0001 37.5 8.2 80 141-226 5-89 (253)
470 3ak4_A NADH-dependent quinucli 84.4 3.2 0.00011 37.5 8.4 79 141-225 11-94 (263)
471 1uuf_A YAHK, zinc-type alcohol 84.3 1.7 5.7E-05 42.1 6.7 49 133-181 186-236 (369)
472 1hdc_A 3-alpha, 20 beta-hydrox 84.2 3.3 0.00011 37.4 8.4 81 141-226 4-88 (254)
473 1id1_A Putative potassium chan 84.2 5.4 0.00018 32.9 9.1 74 143-228 4-82 (153)
474 1e7w_A Pteridine reductase; di 84.2 4.2 0.00014 37.6 9.3 59 141-200 8-73 (291)
475 3qlj_A Short chain dehydrogena 84.1 1.7 5.8E-05 41.0 6.5 84 141-226 26-123 (322)
476 1wma_A Carbonyl reductase [NAD 84.0 3.1 0.00011 37.4 8.1 82 141-225 3-90 (276)
477 1mxh_A Pteridine reductase 2; 83.9 3.5 0.00012 37.5 8.5 81 141-225 10-102 (276)
478 3l9w_A Glutathione-regulated p 83.9 3.9 0.00013 40.3 9.3 73 142-227 4-78 (413)
479 3rku_A Oxidoreductase YMR226C; 83.7 3.6 0.00012 38.2 8.5 82 141-225 32-123 (287)
480 2j8z_A Quinone oxidoreductase; 83.5 2.6 9E-05 40.2 7.7 98 135-242 156-256 (354)
481 1nff_A Putative oxidoreductase 83.5 4.8 0.00016 36.4 9.2 81 141-226 6-90 (260)
482 3gk3_A Acetoacetyl-COA reducta 83.5 3.4 0.00012 37.6 8.2 82 141-225 24-111 (269)
483 3afn_B Carbonyl reductase; alp 83.2 2.1 7.3E-05 38.2 6.6 82 141-226 6-94 (258)
484 3e03_A Short chain dehydrogena 83.1 3 0.0001 38.2 7.7 83 141-225 5-98 (274)
485 3sc4_A Short chain dehydrogena 83.0 2.8 9.4E-05 38.7 7.4 84 141-226 8-102 (285)
486 1xq1_A Putative tropinone redu 82.9 3.7 0.00013 37.0 8.1 83 141-225 13-100 (266)
487 2o23_A HADH2 protein; HSD17B10 82.7 3.4 0.00012 37.2 7.8 80 141-225 11-94 (265)
488 2d8a_A PH0655, probable L-thre 82.7 3.8 0.00013 38.9 8.5 47 135-182 162-211 (348)
489 1v3u_A Leukotriene B4 12- hydr 82.5 2 6.8E-05 40.5 6.3 47 135-181 139-188 (333)
490 3tpc_A Short chain alcohol deh 82.5 2 6.7E-05 38.9 6.1 81 141-225 6-89 (257)
491 3r3s_A Oxidoreductase; structu 82.3 3.1 0.00011 38.6 7.5 84 141-226 48-137 (294)
492 3asu_A Short-chain dehydrogena 82.3 4.9 0.00017 36.2 8.7 77 144-225 2-82 (248)
493 1ja9_A 4HNR, 1,3,6,8-tetrahydr 82.2 3.8 0.00013 36.9 8.0 82 141-226 20-108 (274)
494 3ip1_A Alcohol dehydrogenase, 82.1 6.4 0.00022 38.3 10.0 45 138-182 210-257 (404)
495 1lss_A TRK system potassium up 82.0 6.4 0.00022 31.3 8.5 72 143-228 5-80 (140)
496 2zb4_A Prostaglandin reductase 81.9 2.8 9.6E-05 40.0 7.2 49 135-183 152-206 (357)
497 1m6e_X S-adenosyl-L-methionnin 81.9 0.64 2.2E-05 45.2 2.6 20 143-162 53-72 (359)
498 1sny_A Sniffer CG10964-PA; alp 81.8 2.9 0.0001 37.7 7.0 85 141-226 20-111 (267)
499 2hq1_A Glucose/ribitol dehydro 81.8 3.1 0.00011 36.9 7.1 82 141-226 4-92 (247)
500 2pd6_A Estradiol 17-beta-dehyd 81.7 4.6 0.00016 36.2 8.3 82 141-225 6-100 (264)
No 1
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=100.00 E-value=4.3e-58 Score=438.72 Aligned_cols=264 Identities=29% Similarity=0.448 Sum_probs=244.8
Q ss_pred CChHHHHHHHHhcCCCccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHH
Q 015990 99 DDYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGL 178 (397)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~ 178 (397)
.++..+.+.++.+|.+++|.+||||++|+.++++|++.+++.++ +|||||||+|.+|..|++.+++|+|||+|++|++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~ 83 (271)
T 3fut_A 5 ASPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPV 83 (271)
T ss_dssp CCHHHHHHHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred cCHHHHHHHHHhcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHH
Confidence 45677888999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHH
Q 015990 179 VRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALR 258 (397)
Q Consensus 179 a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~r 258 (397)
+++++.. ++++++++|++++++.+ ...+|.||+|+||+++++++.+++.. ..+..+++|+|+|+|+|
T Consensus 84 l~~~~~~-~~v~vi~~D~l~~~~~~-----------~~~~~~iv~NlPy~iss~il~~ll~~-~~~~~~~lm~QkEva~R 150 (271)
T 3fut_A 84 LEETLSG-LPVRLVFQDALLYPWEE-----------VPQGSLLVANLPYHIATPLVTRLLKT-GRFARLVFLVQKEVAER 150 (271)
T ss_dssp HHHHTTT-SSEEEEESCGGGSCGGG-----------SCTTEEEEEEECSSCCHHHHHHHHHH-CCEEEEEEEEEHHHHHH
T ss_pred HHHhcCC-CCEEEEECChhhCChhh-----------ccCccEEEecCcccccHHHHHHHhcC-CCCCEEEEEeeeeeeee
Confidence 9999864 58999999999997642 12578999999999999999999987 77899999999999999
Q ss_pred HccCCCCCCCccceeeeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchH
Q 015990 259 LVEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKML 338 (397)
Q Consensus 259 l~~a~pg~k~y~~lsv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l 338 (397)
++ |.||+++||++||++|+++++++++.||+++|+|+|+|||+||+++|++.+. .+.|+.+++++|+||||||
T Consensus 151 l~-A~pg~k~yg~lSv~~q~~~~~~~~~~v~~~~F~P~PkVdSavv~l~p~~~~~------~~~~~~~v~~~F~~rrKtL 223 (271)
T 3fut_A 151 MT-ARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLTPTGALD------DPGLFRLVEAAFGKRRKTL 223 (271)
T ss_dssp HT-CCTTSTTCSHHHHHHHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECSCCC------CHHHHHHHHHHTSSTTSCH
T ss_pred cc-cCCCCCcccHHHHHHHHHeeEEEEEEEChHHeECCCCCcEEEEEEEECCCCc------HHHHHHHHHHHHhcCCcHH
Confidence 99 8999999999999999999999999999999999999999999999987532 3689999999999999999
Q ss_pred HHHHhhh-cCHHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Q 015990 339 RKSLQHL-CTSLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLI 388 (397)
Q Consensus 339 ~n~L~~~-~~~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~ 388 (397)
+|+|+.+ .+++.+..+|+++||+++.||| +||++||.+|++.+..
T Consensus 224 ~n~L~~~~~~~~~~~~~l~~~~i~~~~R~e-----~Ls~~~f~~L~~~~~~ 269 (271)
T 3fut_A 224 LNALAAAGYPKARVEEALRALGLPPRVRAE-----ELDLEAFRRLREGLEG 269 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHTTCCTTCCGG-----GCCHHHHHHHHHHHC-
T ss_pred HHHHHhhcCCHHHHHHHHHHCCcCCCCChh-----hCCHHHHHHHHHHHHh
Confidence 9999987 4788899999999999999999 9999999999998754
No 2
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=2.2e-57 Score=430.55 Aligned_cols=252 Identities=22% Similarity=0.427 Sum_probs=224.2
Q ss_pred CccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEE
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQ 193 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~ 193 (397)
+++|+|||||++|+.++++|++.+++.++++|||||||+|.+|..|++.+++|+|||+|++|++.+++++...+++++++
T Consensus 2 ~~~k~~GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~ 81 (255)
T 3tqs_A 2 PMRKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQ 81 (255)
T ss_dssp -------CCEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCCcCCcccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999987667999999
Q ss_pred ccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCCcccee
Q 015990 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPIN 273 (397)
Q Consensus 194 gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~ls 273 (397)
+|++++++.+.. ..+.++ ||+|+||+++++++.++++....+..+++|+|+|+|+|++ |.||++.||++|
T Consensus 82 ~D~~~~~~~~~~--------~~~~~~-vv~NlPY~is~~il~~ll~~~~~~~~~~lm~QkEva~Rl~-a~pg~k~yg~ls 151 (255)
T 3tqs_A 82 NDALQFDFSSVK--------TDKPLR-VVGNLPYNISTPLLFHLFSQIHCIEDMHFMLQKEVVRRIT-AEVGSHDYGRLS 151 (255)
T ss_dssp SCTTTCCGGGSC--------CSSCEE-EEEECCHHHHHHHHHHHHHTGGGEEEEEEEEEHHHHHHHT-CCTTSTTCSHHH
T ss_pred cchHhCCHHHhc--------cCCCeE-EEecCCcccCHHHHHHHHhCCCChheEEEEEeHHHHHHhh-CCCCCCccchhh
Confidence 999999865321 123455 9999999999999999998777889999999999999999 899999999999
Q ss_pred eeeecccCCeEeeeeCCCCccCCCCCceEEEEEEec-cCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhcCHHHHH
Q 015990 274 IFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLK-QATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLCTSLEIE 352 (397)
Q Consensus 274 v~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~-~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~~~~~~~ 352 (397)
|++|+++++++++.||+++|+|+|+|||+||+++|+ +.+.. ..+.+.|+.+++++|+||||||+|+|+.+++.+
T Consensus 152 v~~q~~~~~~~~~~v~~~~F~P~PkVdSavv~l~~~~~~~~~--~~~~~~~~~~v~~~F~~rrK~l~~~L~~~~~~~--- 226 (255)
T 3tqs_A 152 VMAQYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPRHNFTPV--AKNLDQLSHVVKEAFSYRRKTVGNALKKLINPS--- 226 (255)
T ss_dssp HHHHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECCSCSSC--CSCHHHHHHHHHHHHHSTTSCHHHHTTTTCCGG---
T ss_pred heeeeeEEEEEEEEEChHHccCCCCCeEEEEEEEECCCCCCc--cccHHHHHHHHHHHHHccChHHHHHHhhhCCHH---
Confidence 999999999999999999999999999999999998 55432 346788999999999999999999999987653
Q ss_pred HHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Q 015990 353 KALGDVGLPATAAADYKFPITLPSTEYTLFMEHN 386 (397)
Q Consensus 353 ~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~ 386 (397)
.|+++||+++.||| +||++||.+|++.+
T Consensus 227 -~l~~~~i~~~~R~e-----~Ls~~~f~~L~~~~ 254 (255)
T 3tqs_A 227 -QWPLLEINPQLRPQ-----ELTVEDFVKISNIL 254 (255)
T ss_dssp -GTGGGTCCTTSCGG-----GSCHHHHHHHHHHH
T ss_pred -HHHHCCcCCCCCce-----eCCHHHHHHHHHHh
Confidence 57889999999999 99999999999875
No 3
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.2e-56 Score=428.89 Aligned_cols=259 Identities=25% Similarity=0.451 Sum_probs=228.9
Q ss_pred CCCccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCc----EEEEeCCHHHHHHHHHHhccCC
Q 015990 112 GRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGAT----VLAIEKDQHMVGLVRERFASID 187 (397)
Q Consensus 112 ~~~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~----V~~vE~d~~~i~~a~~~~~~~~ 187 (397)
|++++|.|||||++|+.++++|++.+++.++++|||||||+|.+|..|++.+.+ |+|||+|++|++.++++. .+
T Consensus 13 ~~~~~k~~GQ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~~ 90 (279)
T 3uzu_A 13 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--GE 90 (279)
T ss_dssp -----CCCSCCEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--GG
T ss_pred CCCccccCCccccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--CC
Confidence 678999999999999999999999999999999999999999999999998776 999999999999999985 46
Q ss_pred ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCC
Q 015990 188 QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTS 267 (397)
Q Consensus 188 ~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k 267 (397)
+++++++|++++++.+.+.+ .....+.||+|+||+++++++.+|++....+..+++|+|||+|+|++ |.||++
T Consensus 91 ~v~~i~~D~~~~~~~~~~~~------~~~~~~~vv~NlPY~iss~il~~ll~~~~~~~~~~~m~QkEva~Rl~-A~pg~k 163 (279)
T 3uzu_A 91 LLELHAGDALTFDFGSIARP------GDEPSLRIIGNLPYNISSPLLFHLMSFAPVVIDQHFMLQNEVVERMV-AEPGTK 163 (279)
T ss_dssp GEEEEESCGGGCCGGGGSCS------SSSCCEEEEEECCHHHHHHHHHHHGGGGGGEEEEEEEEEHHHHHHHT-CCTTST
T ss_pred CcEEEECChhcCChhHhccc------ccCCceEEEEccCccccHHHHHHHHhccCCccEEEEEeeHHHHHHHh-CCCCCC
Confidence 89999999999987643200 00145689999999999999999998777889999999999999999 899999
Q ss_pred CccceeeeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhcC
Q 015990 268 EYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLCT 347 (397)
Q Consensus 268 ~y~~lsv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~~ 347 (397)
.||++||++|+++++++++.||+++|+|+|+|||+||+|+|++.+..+ ..+.+.|+.+++++|+||||||+|+|+.+++
T Consensus 164 ~yg~lSv~~q~~~~~~~~~~v~~~~F~P~PkVdSavv~l~p~~~~~~~-~~~~~~~~~~v~~~F~~rrK~l~n~L~~~~~ 242 (279)
T 3uzu_A 164 AFSRLSVMLQYRYVMDKLIDVPPESFQPPPKVDSAIVRMIPHAPHELP-AVDPAVLGEVVTAAFSQRRKMLRNTLGGYRD 242 (279)
T ss_dssp TCCHHHHHHHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECCGGGSC-SSCHHHHHHHHHHHGGGTTSBHHHHTGGGTT
T ss_pred cccHHHHHHhhheEEEEEEEEChHHccCCCCCeEEEEEEEecCCCCCC-cccHHHHHHHHHHHHhccChHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999998754332 3467889999999999999999999999876
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHh
Q 015990 348 SLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLIS 389 (397)
Q Consensus 348 ~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~~ 389 (397)
. .+|+++||+++.||| +||++||++|++.+...
T Consensus 243 ~----~~l~~~~i~~~~R~e-----~Ls~~~f~~L~~~~~~~ 275 (279)
T 3uzu_A 243 L----VDFDALGFDLARRAE-----DIGVDEYVRVAQAVASA 275 (279)
T ss_dssp T----CCTTTTTCCTTSBGG-----GCCHHHHHHHHHHHHHH
T ss_pred H----HHHHHCCcCCCCCce-----eCCHHHHHHHHHHHHHh
Confidence 3 468889999999999 99999999999998654
No 4
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=100.00 E-value=8.9e-54 Score=413.41 Aligned_cols=268 Identities=26% Similarity=0.385 Sum_probs=226.6
Q ss_pred HHHHHHHHhcCCCccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHH
Q 015990 102 HATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 102 ~~~~~~l~~~~~~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~ 181 (397)
+.+...+.+++.+++|.+||||++|+.++++|++.+++.++++|||||||+|.+|..|++.+++|+|||+|+++++.+++
T Consensus 11 ~~~~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~ 90 (295)
T 3gru_A 11 SSGLVPRGSHMFKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANK 90 (295)
T ss_dssp -------------------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHH
T ss_pred cchhchhHhcCCCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHH
Confidence 34556677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHcc
Q 015990 182 RFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVE 261 (397)
Q Consensus 182 ~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~ 261 (397)
++...++++++++|++++++.+ ..+|.|++|+||+++++++.++++.+ +..+++|+|+|+++|++
T Consensus 91 ~~~~~~~v~vi~gD~l~~~~~~------------~~fD~Iv~NlPy~is~pil~~lL~~~--~~~~~lm~Q~eva~Rl~- 155 (295)
T 3gru_A 91 LKELYNNIEIIWGDALKVDLNK------------LDFNKVVANLPYQISSPITFKLIKRG--FDLAVLMYQYEFAKRMV- 155 (295)
T ss_dssp HHHHCSSEEEEESCTTTSCGGG------------SCCSEEEEECCGGGHHHHHHHHHHHC--CSEEEEEEEHHHHHHHH-
T ss_pred HhccCCCeEEEECchhhCCccc------------CCccEEEEeCcccccHHHHHHHHhcc--cceEEEeeecccccEEE-
Confidence 9876679999999999987531 36899999999999999999999853 67899999999999999
Q ss_pred CCCCCCCccceeeeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHH
Q 015990 262 PSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKS 341 (397)
Q Consensus 262 a~pg~k~y~~lsv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~ 341 (397)
+.||++.||.+|+++|+++++++++.|++++|+|+|+|||+||+++|++++. ...+.+.|+.+++++|+||||||+|+
T Consensus 156 a~pg~k~yg~Lsv~~q~~~~~~~~~~v~~~~F~P~PkVdSavv~l~~~~~~~--~~~~~~~~~~~v~~~F~~rrK~l~n~ 233 (295)
T 3gru_A 156 AAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY--HIENENFFDDFLRAIFQHRNKSVRKA 233 (295)
T ss_dssp CCTTSTTCSHHHHHHHTTEEEEEEEEECGGGEESCCSSCEEEEEEEECHHHH--CCSCHHHHHHHHHHHHTTTTSBHHHH
T ss_pred ecCCCcchhHHHHHHHhhccEEEEEEECcccCCCcCCCeEEEEEEEcCCCCC--CcccHHHHHHHHHHHHccCchHHHHH
Confidence 8999999999999999999999999999999999999999999999985321 23456789999999999999999999
Q ss_pred Hhhh-----cCHHHHHHHHHHC-----CCCC--CCCCCCCCCCCcCHHHHHHHHHHHHHhhc
Q 015990 342 LQHL-----CTSLEIEKALGDV-----GLPA--TAAADYKFPITLPSTEYTLFMEHNLISYG 391 (397)
Q Consensus 342 L~~~-----~~~~~~~~~l~~~-----gi~~--~~R~e~~~~~~L~~~~~~~l~~~~~~~~~ 391 (397)
|+.+ .+++.+..+|+++ |+++ +.||| +||++||++|++.+...-.
T Consensus 234 L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~R~e-----~Ls~~~f~~L~~~~~~~~~ 290 (295)
T 3gru_A 234 LIDSSKELNYNKDEMKKILEDFLNTNSEIKNLINEKVF-----KLSVKDIVNLSNEFYRFLQ 290 (295)
T ss_dssp HHHTGGGGTCCHHHHHHHHHHHHTTCHHHHHHHTSBGG-----GSCHHHHHHHHHHHHHHHH
T ss_pred HhhhhccccCCHHHHHHHHHHhhhcccCCCccccCChh-----hCCHHHHHHHHHHHHHhhh
Confidence 9875 3577888899998 8888 99999 9999999999999876543
No 5
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=100.00 E-value=4.4e-52 Score=393.64 Aligned_cols=248 Identities=25% Similarity=0.407 Sum_probs=221.2
Q ss_pred CccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCc--EEEEeCCHHHHHHHHHHhccCCceEEEEccccc
Q 015990 121 QHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGAT--VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVK 198 (397)
Q Consensus 121 Qnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~--V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~ 198 (397)
|||++|+.++++|++.+++.++++|||||||+|.+|. +. .+.+ |+|||+|++|++.+++++...++++++++|+++
T Consensus 1 QnfL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 1 QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp CCEECCHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred CCCcCCHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 8999999999999999999999999999999999999 65 4677 999999999999999988655689999999999
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCCccceeeeeec
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPINIFVNF 278 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~lsv~~q~ 278 (397)
+++.+.+. +.+.++.||+|+||+++++++.++++....+..+++|+|+|+|+||+ +.||++.||++|+++|+
T Consensus 79 ~~~~~~~~-------~~~~~~~vvsNlPY~i~~~il~~ll~~~~~~~~~~~m~QkEva~Rl~-a~pG~k~yg~lsv~~q~ 150 (252)
T 1qyr_A 79 FNFGELAE-------KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLV-AGPNSKAYGRLSVMAQY 150 (252)
T ss_dssp CCHHHHHH-------HHTSCEEEEEECCTTTHHHHHHHHHTTGGGEEEEEEEEEHHHHHHHH-CCTTSTTCSHHHHHHHH
T ss_pred CCHHHhhc-------ccCCceEEEECCCCCccHHHHHHHHhcCCCcceEEEEEeHHHHHHhc-CCCCCccccHHHHHHHH
Confidence 87653210 01246899999999999999999988766789999999999999999 89999999999999999
Q ss_pred ccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhcCHHHHHHHHHHC
Q 015990 279 YSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLCTSLEIEKALGDV 358 (397)
Q Consensus 279 ~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~~~~~~~~~l~~~ 358 (397)
+++++.++.||+++|+|+|+|||+||+++|++.+..+ ..+.+.|+.+++++|+||||||+|+|+.+++ ..+|+++
T Consensus 151 ~~~~~~~~~v~~~~F~P~PkV~Savv~l~~~~~~~~~-~~~~~~~~~~v~~~F~~rrK~l~n~l~~~~~----~~~l~~~ 225 (252)
T 1qyr_A 151 YCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHP-VKDVRVLSRITTEAFNQRRKTIRNSLGNLFS----VEVLTGM 225 (252)
T ss_dssp HEEEEEEEEECGGGEESCCSSCEEEEEEEECSSCSSC-CSCHHHHHHHHHHHHHTTTSBHHHHTTTTCC----HHHHHHT
T ss_pred HheEEEEEEEChHHccCCCCceEEEEEEEEcCcCCCC-ccCHHHHHHHHHHHHHhCCcHHHHHHhhhhh----HHHHHHc
Confidence 9999999999999999999999999999998764332 2356789999999999999999999998765 3578899
Q ss_pred CCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Q 015990 359 GLPATAAADYKFPITLPSTEYTLFMEHNLI 388 (397)
Q Consensus 359 gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~ 388 (397)
||+++.||| +||++||++|++.+..
T Consensus 226 ~i~~~~R~e-----~Ls~~~f~~l~~~~~~ 250 (252)
T 1qyr_A 226 GIDPAMRAE-----NISVAQYCQMANYLAE 250 (252)
T ss_dssp TCCTTSBGG-----GSCHHHHHHHHHHHHH
T ss_pred CCCCCCChH-----HCCHHHHHHHHHHHHh
Confidence 999999999 9999999999998743
No 6
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=100.00 E-value=1.7e-52 Score=395.93 Aligned_cols=243 Identities=27% Similarity=0.428 Sum_probs=218.4
Q ss_pred CCccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccCCceEE
Q 015990 113 RFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASIDQLKV 191 (397)
Q Consensus 113 ~~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~~~v~i 191 (397)
.+++|.|||||+.|+.++++|++.+++.++++|||||||+|.+|..+++.+ ++|+|||+|+++++.++++ ..+++++
T Consensus 3 ~~~~k~~GQnfl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~~~~v~~ 80 (249)
T 3ftd_A 3 VRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--GDERLEV 80 (249)
T ss_dssp -----CCCSSCEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--CCTTEEE
T ss_pred CCCCCcccccccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--cCCCeEE
Confidence 578999999999999999999999999999999999999999999999995 8999999999999999988 3468999
Q ss_pred EEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCCccc
Q 015990 192 LQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRP 271 (397)
Q Consensus 192 i~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~ 271 (397)
+++|++++++.+. .+ ...|++|+||+++++++.++++.+..+..+++|+|+|+|+|++ + ++.||.
T Consensus 81 i~~D~~~~~~~~~----------~~-~~~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~Qkeva~Rl~-a---~k~yg~ 145 (249)
T 3ftd_A 81 INEDASKFPFCSL----------GK-ELKVVGNLPYNVASLIIENTVYNKDCVPLAVFMVQKEVAEKLQ-G---KKDTGW 145 (249)
T ss_dssp ECSCTTTCCGGGS----------CS-SEEEEEECCTTTHHHHHHHHHHTGGGCSEEEEEEEHHHHHHHH-T---SSCCCH
T ss_pred EEcchhhCChhHc----------cC-CcEEEEECchhccHHHHHHHHhcCCCCceEEEEEeHHHHHHhh-c---cccccH
Confidence 9999999987532 12 4589999999999999999998877889999999999999999 5 899999
Q ss_pred eeeeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhcCHHHH
Q 015990 272 INIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLCTSLEI 351 (397)
Q Consensus 272 lsv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~~~~~~ 351 (397)
+||++|+++++++++.||+++|+|+|+|||+||+++|++.+..+ +.+.|+.+++++|+||||||+|+|+.+
T Consensus 146 lsv~~q~~~~~~~~~~v~~~~F~P~PkV~savv~l~~~~~~~~~---~~~~~~~~v~~~F~~rrk~l~~~l~~~------ 216 (249)
T 3ftd_A 146 LSVFVRTFYDVNYVMTVPPRFFVPPPKVQSAVIKLVKNEKFPVK---DLKNYKKFLTKIFQNRRKVLRKKIPEE------ 216 (249)
T ss_dssp HHHHHHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECCCSCCC---CHHHHHHHHHHHHSSTTSCGGGTSCHH------
T ss_pred HHHHHHhHEEEEEEEEEChHHccCCCCCeEEEEEEEECCCCCcc---hHHHHHHHHHHHHhCcChhHHHHHHHH------
Confidence 99999999999999999999999999999999999998765432 267899999999999999999999875
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Q 015990 352 EKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLI 388 (397)
Q Consensus 352 ~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~ 388 (397)
+|+++||+++.||| +||++||.+|++.+..
T Consensus 217 --~l~~~~i~~~~r~e-----~l~~~~f~~l~~~~~~ 246 (249)
T 3ftd_A 217 --LLKEAGINPDARVE-----QLSLEDFFKLYRLIED 246 (249)
T ss_dssp --HHHHTTCCTTCCGG-----GCCHHHHHHHHHHHHC
T ss_pred --HHHHCCCCCCCChh-----hCCHHHHHHHHHHHHH
Confidence 68899999999999 9999999999998854
No 7
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=100.00 E-value=3.1e-49 Score=389.24 Aligned_cols=261 Identities=15% Similarity=0.134 Sum_probs=217.3
Q ss_pred CCccccCCCccCCCHHHHHHHHHHhcCCC------CCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhc
Q 015990 113 RFPRKSLGQHYMLNSEINDQLAAAAAVQE------GDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA 184 (397)
Q Consensus 113 ~~~~k~~GQnfl~~~~i~~~i~~~~~~~~------~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~ 184 (397)
..++|.|||||++|++++++|++.+++.+ ++.|||||||.|.+|..|++. +++|++||+|+++++.+++.+
T Consensus 24 ~~~kk~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~- 102 (353)
T 1i4w_A 24 SKLKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF- 102 (353)
T ss_dssp CSSCCGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-
T ss_pred cCCCCCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-
Confidence 36899999999999999999999998764 589999999999999999986 679999999999999999987
Q ss_pred cCCceEEEEccccccc-hhhhhhh--HHh----hhcCCCCcceEeecCCCcCcHHHHHHhccCC--------CceeeeEE
Q 015990 185 SIDQLKVLQEDFVKCH-IRSHMLS--LFE----RRKSSSGFAKVVANIPFNISTDVIKQLLPMG--------DIFSEVVL 249 (397)
Q Consensus 185 ~~~~v~ii~gD~~~~~-~~~~~~~--~~~----~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g--------~~~~~~~l 249 (397)
..++++++++|+++++ +.+.+.+ +.. .....+....||+|+||+|+++|+.+++... ..+..+++
T Consensus 103 ~~~~l~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~vvaNLPYnIstpil~~ll~~~~~~~~l~~~~~~~m~l 182 (353)
T 1i4w_A 103 EGSPLQILKRDPYDWSTYSNLIDEERIFVPEVQSSDHINDKFLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKVKMLL 182 (353)
T ss_dssp TTSSCEEECSCTTCHHHHHHHTTTTCSSCCCCCCTTSEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSEEEEEE
T ss_pred cCCCEEEEECCccchhhHHHhhcccccccccccccccCCCceEEEEECCCchHHHHHHHHHHhccccccccccCcceEEE
Confidence 4579999999998886 3221100 000 0000012348999999999999999988631 13568999
Q ss_pred eeeHHHHHHHccCCCCCCCccceeeeeecccCCeEeeeeC---CCCccCCC----------CC--------ceEEEEEEe
Q 015990 250 LLQEETALRLVEPSLRTSEYRPINIFVNFYSEPEYKFKVP---RTNFFPQP----------KV--------DAAVVTFKL 308 (397)
Q Consensus 250 m~Qkeva~rl~~a~pg~k~y~~lsv~~q~~~~~~~~~~v~---~~~F~P~P----------~V--------dSavv~l~~ 308 (397)
|+|+|+|+||+ |.||++.||++||++|+++++++++.++ +++|+|+| +| ||+||+|+|
T Consensus 183 mvQkEvA~Rl~-A~PGsk~yg~LSV~~q~~~~v~~l~~v~~~~~~~F~P~P~~k~~p~~~PkV~~~~~~~~dSaVV~l~p 261 (353)
T 1i4w_A 183 WMPSTTARKLL-ARPGMHSRSKCSVVREAFTDTKLIAISDANELKGFDSQCIEEWDPILFSAAEIWPTKGKPIALVEMDP 261 (353)
T ss_dssp EEEHHHHHHHH-CCTTSTTCCHHHHHHHHHEEEEEEEESCGGGGGGSCHHHHHHHCCEECCGGGBSSCSCCCEEEEEEEE
T ss_pred EeEHHHHHHhc-CCCCCccccHHHHHHHHHcceEEEEecCCccCCCccCCCcccccccccCcccccCCCCCceEEEEEEE
Confidence 99999999999 8999999999999999999999999999 99999998 88 999999999
Q ss_pred ccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhcCH--HHHHHHHH-HCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Q 015990 309 KQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLCTS--LEIEKALG-DVGLPATAAADYKFPITLPSTEYTLFMEH 385 (397)
Q Consensus 309 ~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~~~--~~~~~~l~-~~gi~~~~R~e~~~~~~L~~~~~~~l~~~ 385 (397)
++. . .+.+.|+.+++++|+||||||+|+|+.+++. +.+...|+ .+|+ +.||| +||++||++|++.
T Consensus 262 ~~~-~----~~~~~~~~vvr~~F~qRRKtL~n~L~~l~~~~~~~l~~~l~~~~~i--~~R~e-----~Ls~e~f~~L~~~ 329 (353)
T 1i4w_A 262 IDF-D----FDVDNWDYVTRHLMILKRTPLNTVMDSLGHGGQQYFNSRITDKDLL--KKCPI-----DLTNDEFIYLTKL 329 (353)
T ss_dssp CCC-C----SCHHHHHHHHHHHHTTTTSCTTTGGGGSSTTHHHHHTTTCCCCTTT--SSCGG-----GCCHHHHHHHHHH
T ss_pred CCC-c----ccHHHHHHHHHHHHhhchHHHHHHHHhhccccHHHHHHHhhhhcCc--ccChh-----hCCHHHHHHHHHH
Confidence 865 1 2557899999999999999999999987653 22333444 6677 58999 9999999999999
Q ss_pred HH
Q 015990 386 NL 387 (397)
Q Consensus 386 ~~ 387 (397)
|.
T Consensus 330 ~~ 331 (353)
T 1i4w_A 330 FM 331 (353)
T ss_dssp HH
T ss_pred HH
Confidence 84
No 8
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=100.00 E-value=4.5e-45 Score=351.58 Aligned_cols=247 Identities=28% Similarity=0.439 Sum_probs=219.0
Q ss_pred cccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC---CceEEE
Q 015990 116 RKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVL 192 (397)
Q Consensus 116 ~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii 192 (397)
+|.+||||+.|+.++++|++.+.+.++++|||||||+|.+|..+++.+.+|+|||+|+++++.+++++... ++++++
T Consensus 3 ~k~~gq~fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 82 (285)
T 1zq9_A 3 NTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVL 82 (285)
T ss_dssp -----CCEECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE
T ss_pred CCCCCcCccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 68899999999999999999999999999999999999999999999999999999999999999998643 489999
Q ss_pred EccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCCccce
Q 015990 193 QEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPI 272 (397)
Q Consensus 193 ~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~l 272 (397)
++|+++.++ +.+|.|++|+||+++++++.++++....+..+++|+|+|+++|++ +.||++.|+.+
T Consensus 83 ~~D~~~~~~--------------~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~v-lkPGg~~y~~l 147 (285)
T 1zq9_A 83 VGDVLKTDL--------------PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLV-AKPGDKLYCRL 147 (285)
T ss_dssp ESCTTTSCC--------------CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHH-CCTTCTTCSHH
T ss_pred Ecceecccc--------------hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHh-cCCCCcccchh
Confidence 999998753 368999999999999999999988777788999999999999998 78999999999
Q ss_pred eeeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhh-------
Q 015990 273 NIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHL------- 345 (397)
Q Consensus 273 sv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~------- 345 (397)
++..|++++++..+.+++++|+|+|+|||+|++++|++++. ..+.+.|+.+++++|.||||+|+|+|+..
T Consensus 148 sv~~~~~~~~~~~~~v~~~~F~P~p~v~savv~~~~~~~~~---~~~~~~~~~~~~~~F~~rrK~l~~~l~~~~~~~~~~ 224 (285)
T 1zq9_A 148 SINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP---PINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLE 224 (285)
T ss_dssp HHHHHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECSSCC---SCCHHHHHHHHHHHHTTTTSBHHHHTTSHHHHHHHH
T ss_pred hhhhhhhhheeeeEEEChhhCCCCCCCcEEEEEEEECCCCC---CCCHHHHHHHHHHHHhcchhHHHHHhchhcchhhhh
Confidence 99999999999999999999999999999999999986532 12457899999999999999999998741
Q ss_pred -----c--------C-----HHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Q 015990 346 -----C--------T-----SLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHN 386 (397)
Q Consensus 346 -----~--------~-----~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~ 386 (397)
+ + ++.+..+|+++||+ +.||| +||++||++|++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~R~e-----~l~~~~f~~l~~~~ 277 (285)
T 1zq9_A 225 KNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFS-DKRAR-----SMDIDDFIRLLHGF 277 (285)
T ss_dssp HHHHHHHHHHTCCCCTTCCHHHHHHHHHHHHTCT-TCBGG-----GCCHHHHHHHHHHH
T ss_pred hhhhhhhhhcccccccchhhHHHHHHHHHhCCCC-CCChh-----hCCHHHHHHHHHHH
Confidence 0 1 34567889999998 78999 99999999999987
No 9
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=100.00 E-value=1.5e-44 Score=340.29 Aligned_cols=238 Identities=21% Similarity=0.328 Sum_probs=204.8
Q ss_pred CccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEE
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQ 193 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~ 193 (397)
++++.|||||++|+.++++|++.+++.++++|||||||+|.+|..+++.+.+|+|||+|+++++.+++++...+++++++
T Consensus 3 ~~~k~~gQ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~ 82 (244)
T 1qam_A 3 EKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLN 82 (244)
T ss_dssp -------CCBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEEC
T ss_pred CCCccCCccccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEE
Confidence 57899999999999999999999999899999999999999999999999999999999999999999987657899999
Q ss_pred ccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCCcccee
Q 015990 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPIN 273 (397)
Q Consensus 194 gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~ls 273 (397)
+|++++++.+ +....|++|+||+++++++.+++.. .....+++|+|+|++.|++ +.+ |.++
T Consensus 83 ~D~~~~~~~~------------~~~~~vv~nlPy~~~~~~l~~~l~~-~~~~~~~lm~q~e~a~rll-~~~-----G~l~ 143 (244)
T 1qam_A 83 KDILQFKFPK------------NQSYKIFGNIPYNISTDIIRKIVFD-SIADEIYLIVEYGFAKRLL-NTK-----RSLA 143 (244)
T ss_dssp CCGGGCCCCS------------SCCCEEEEECCGGGHHHHHHHHHHS-CCCSEEEEEEEHHHHHHHT-CTT-----SHHH
T ss_pred ChHHhCCccc------------CCCeEEEEeCCcccCHHHHHHHHhc-CCCCeEEEEEEHHHHHHHh-cCC-----cchh
Confidence 9999986531 1233799999999999999998865 3466789999999999998 544 6899
Q ss_pred eeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhcCHHHHHH
Q 015990 274 IFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLCTSLEIEK 353 (397)
Q Consensus 274 v~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~~~~~~~~ 353 (397)
++.+++++++.++.+++++|.|+|+|+|+||+++|++++ .+ ..+.+.|+.+++++|+||||||+|+++
T Consensus 144 v~~~~~~~~~~~~~v~~~~F~P~p~v~s~vv~~~~~~~~-~~-~~~~~~~~~~v~~~F~~rrk~l~~~~~---------- 211 (244)
T 1qam_A 144 LFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKKSR-IS-HKDKQKYNYFVMKWVNKEYKKIFTKNQ---------- 211 (244)
T ss_dssp HHHTTTEEEEEEEEECGGGSBSCCSSCEEEEEEEECCCS-SC-GGGHHHHHHHHHHHHTTCGGGTCCHHH----------
T ss_pred HHhhhhEeEEEEEEEChhhccCCCCceEEEEEEEECCCC-CC-cccHHHHHHHHHHHHhhccccccchHH----------
Confidence 999999999999999999999999999999999997642 22 245678999999999999999999883
Q ss_pred HHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Q 015990 354 ALGDVGLPATAAADYKFPITLPSTEYTLFMEHNL 387 (397)
Q Consensus 354 ~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~ 387 (397)
+++++|++++.||| +||++||++|++.+.
T Consensus 212 ~~~~~~~~~~~r~e-----~l~~~~~~~l~~~~~ 240 (244)
T 1qam_A 212 FNNSLKHAGIDDLN-----NISFEQFLSLFNSYK 240 (244)
T ss_dssp HHHHHHHHTCSCTT-----SCCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCce-----eCCHHHHHHHHHHHH
Confidence 36678899999999 999999999999873
No 10
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=100.00 E-value=7.9e-44 Score=345.21 Aligned_cols=256 Identities=29% Similarity=0.404 Sum_probs=215.1
Q ss_pred cCCCccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--Cc
Q 015990 111 KGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQ 188 (397)
Q Consensus 111 ~~~~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~ 188 (397)
++..+++.|||||+.++.+++++++.+.+.++++|||||||+|.+|..|++.+++|+|||+|+.+++.|++++... ++
T Consensus 12 ~~~~~~k~~Gq~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~ 91 (299)
T 2h1r_A 12 SGRENLYFQGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNN 91 (299)
T ss_dssp -----------CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCC
T ss_pred ccccchhccccceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 4567899999999999999999999999999999999999999999999999899999999999999999987532 58
Q ss_pred eEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCC
Q 015990 189 LKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSE 268 (397)
Q Consensus 189 v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~ 268 (397)
++++++|+++.++ +.+|.|++|+||+++++++.+++.....+..+++|+|+|++.|++ +.+|++.
T Consensus 92 v~~~~~D~~~~~~--------------~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rll-a~~G~~~ 156 (299)
T 2h1r_A 92 LEVYEGDAIKTVF--------------PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERML-ANVGDSN 156 (299)
T ss_dssp EEC----CCSSCC--------------CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHT-CCTTSTT
T ss_pred eEEEECchhhCCc--------------ccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHh-cCCCCcc
Confidence 9999999998753 468999999999999999999888777788899999999999999 8999999
Q ss_pred ccceeeeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhc--
Q 015990 269 YRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLC-- 346 (397)
Q Consensus 269 y~~lsv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~-- 346 (397)
|+.+++.++++++++.++.++++.|.|+|+|+|++++++|+.++. . .+.+.|+.+++++|.||||||+|+|++..
T Consensus 157 y~~ls~~~~~~~~~~~~~~v~~~~F~p~p~V~s~vv~~~~~~~~~--~-~~~~~~~~~v~~~F~~rrKtl~~~l~~~~~~ 233 (299)
T 2h1r_A 157 YSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSF--L-TNFDEWDNLLRICFSRKRKTLHAIFKRNAVL 233 (299)
T ss_dssp CCHHHHHHHHHEEEEEEEEECGGGEESCCSSCEEEEEEEECGGGG--G-SCHHHHHHHHHHHHTTTTSBHHHHHTSHHHH
T ss_pred hhHHHHHHHHhhceEEEEEECchhcCCCCCCEEEEEEEEECCCCC--C-CCHHHHHHHHHHHHhhcchHHHHHhhhhhhh
Confidence 999999999999999999999999999999999999999986531 1 25678999999999999999999986421
Q ss_pred ---------------------C-HHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHhhc
Q 015990 347 ---------------------T-SLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLISYG 391 (397)
Q Consensus 347 ---------------------~-~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~~~~ 391 (397)
+ ++.+..+|+++|+++ .||| +||+++|.+|++.+- ..|
T Consensus 234 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~-~R~e-----~l~~~~f~~l~~~~~-~~~ 293 (299)
T 2h1r_A 234 NMLEHNYKNWCTLNKQVPVNFPFKKYCLDVLEHLDMCE-KRSI-----NLDENDFLKLLLEFN-KKG 293 (299)
T ss_dssp HHHHHHHHHHHHHTTCCCCSSCHHHHHHHHHHHTTCTT-CBGG-----GCCHHHHHHHHHHHH-HTT
T ss_pred hhhhhhhhhhcccccccccccchHHHHHHHHHhCCCCC-CChh-----hCCHHHHHHHHHHHH-hCC
Confidence 1 345678899999986 7999 999999999999974 444
No 11
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=100.00 E-value=4.1e-39 Score=302.94 Aligned_cols=239 Identities=22% Similarity=0.348 Sum_probs=206.8
Q ss_pred CccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEE
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQ 193 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~ 193 (397)
++++.+||||++++.+++.+++.+++.++++|||||||+|.+|..+++.+.+|+|+|+|+++++.|++++...+++++++
T Consensus 2 ~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~ 81 (245)
T 1yub_A 2 NKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIH 81 (245)
T ss_dssp CCCCCSCCCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECC
T ss_pred CCCcccCCCCCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999988876546899999
Q ss_pred ccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCCcccee
Q 015990 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPIN 273 (397)
Q Consensus 194 gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~ls 273 (397)
+|+.++++. ..+.+ .|++|+||+++++++.++... .....+++|+|+|++.|++ +.+ |.++
T Consensus 82 ~D~~~~~~~-----------~~~~f-~vv~n~Py~~~~~~~~~~~~~-~~~~~~~lm~q~e~a~rll-~~~-----G~l~ 142 (245)
T 1yub_A 82 QDILQFQFP-----------NKQRY-KIVGNIPYHLSTQIIKKVVFE-SRASDIYLIVEEGFYKRTL-DIH-----RTLG 142 (245)
T ss_dssp SCCTTTTCC-----------CSSEE-EEEEECCSSSCHHHHHHHHHH-CCCEEEEEEEESSHHHHHH-CGG-----GSHH
T ss_pred CChhhcCcc-----------cCCCc-EEEEeCCccccHHHHHHHHhC-CCCCeEEEEeeHHHHHHHh-CCC-----Cchh
Confidence 999988642 11356 899999999999998887754 2356789999999999999 433 6788
Q ss_pred eeeecccCCeEeeeeCCCCccCCCCCceEEEEEEeccCCCCCCccchHHHHHHHHHHhcCCCchHHHHHhhhcCHHHHHH
Q 015990 274 IFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAFNGKRKMLRKSLQHLCTSLEIEK 353 (397)
Q Consensus 274 v~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~~~~~~~~~~~~~f~~~v~~~F~~rRK~l~n~L~~~~~~~~~~~ 353 (397)
+..+.+++++.++.++++.|.|+|+|+|++|+++++++ ... ..+...|..+++++|.||||+|+|+++
T Consensus 143 v~~~~~~~~~~~~~v~~~~f~P~p~v~s~~v~~~~~~~-~~~-~~~~~~~~~~~~~~f~~rrk~l~~~~~---------- 210 (245)
T 1yub_A 143 LLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTT-DVP-DKYWKLYTYFVSKWVNREYRQLFTKNQ---------- 210 (245)
T ss_dssp HHTTTTBCCCEEEEECCTTSBSSCCSCEEEEEECBCSC-SSC-HHHHHHHHHHHHHHHHTCHHHHCSSSH----------
T ss_pred hhheeheeEEEEEEECchhccCCCCceEEEEEEEECCC-CCC-cccHHHHHHHHHHHHhhcchhhhchHH----------
Confidence 99999999999999999999999999999999988543 221 234567999999999999999999873
Q ss_pred HHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Q 015990 354 ALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLI 388 (397)
Q Consensus 354 ~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~ 388 (397)
+++.+|+++..||| +|++|+|.+|.+.|..
T Consensus 211 ~~~~~~~~~~~r~~-----~l~~~~f~~l~~~~~~ 240 (245)
T 1yub_A 211 FHQAMKHAKVNNLS-----TITYEQVLSIFNSYLL 240 (245)
T ss_dssp HHHHHHHTTCSCTT-----SCCSHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCChh-----hCCHHHHHHHHHHHHH
Confidence 35667889999999 9999999999998863
No 12
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.53 E-value=5e-13 Score=120.69 Aligned_cols=102 Identities=29% Similarity=0.405 Sum_probs=88.0
Q ss_pred CccccCCCccCCCHHHHHHHHHHhc---CCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC-c
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAAA---VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID-Q 188 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~~---~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~-~ 188 (397)
.+++.+|| |..++.+...++..+. ..++++|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+ +
T Consensus 20 ~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 98 (207)
T 1wy7_A 20 NPKVWLEQ-YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGK 98 (207)
T ss_dssp SCCGGGTC-CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTS
T ss_pred Ccccceee-ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 56778899 8899999988887664 55788999999999999999999865 79999999999999999987655 8
Q ss_pred eEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcH
Q 015990 189 LKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST 231 (397)
Q Consensus 189 v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s 231 (397)
++++++|+.+++ ..+|+|++|+||+...
T Consensus 99 ~~~~~~d~~~~~---------------~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 99 FKVFIGDVSEFN---------------SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp EEEEESCGGGCC---------------CCCSEEEECCCCSSSS
T ss_pred EEEEECchHHcC---------------CCCCEEEEcCCCcccc
Confidence 999999998862 3689999999997653
No 13
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.49 E-value=5.1e-13 Score=120.90 Aligned_cols=146 Identities=18% Similarity=0.200 Sum_probs=114.5
Q ss_pred HHHHHHHhhh-cCCCChHHHHHHHHhcCC---Ccc-------------ccCCCccCCCHHHHHHHHHHhcCCCCCEEEEE
Q 015990 86 AASACIVCAR-SQDDDYHATIKALNSKGR---FPR-------------KSLGQHYMLNSEINDQLAAAAAVQEGDIVLEI 148 (397)
Q Consensus 86 ar~~mv~~~~-~~~~~~~~~~~~l~~~~~---~~~-------------k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEI 148 (397)
.+..|+.+++ .+++..+.+.+++..... .+. ...|+ ++..+.+...+++.+.+.++++||||
T Consensus 6 ~~~~~~~~~l~~~gv~~~~~~~~~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~vLdi 84 (210)
T 3lbf_A 6 RRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQ-TISQPYMVARMTELLELTPQSRVLEI 84 (210)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECTTSC-EECCHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHhCCHHHcCCcchhhhccCCCccccCCCC-EeCCHHHHHHHHHhcCCCCCCEEEEE
Confidence 3456777777 889999999888764321 111 01233 55688999999999999999999999
Q ss_pred cCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCC
Q 015990 149 GPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 149 G~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
|||+|.++..+++.+.+|+++|+++.+++.|++++... ++++++.+|+.+.... .+.+|+|+++.+
T Consensus 85 G~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------------~~~~D~i~~~~~ 152 (210)
T 3lbf_A 85 GTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA------------RAPFDAIIVTAA 152 (210)
T ss_dssp CCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG------------GCCEEEEEESSB
T ss_pred cCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc------------CCCccEEEEccc
Confidence 99999999999999999999999999999999998754 3899999999886432 257999988744
Q ss_pred -CcCcHHHHHHhccCCCce
Q 015990 227 -FNISTDVIKQLLPMGDIF 244 (397)
Q Consensus 227 -y~i~s~il~~L~~~g~~~ 244 (397)
.++..++...|.++|.++
T Consensus 153 ~~~~~~~~~~~L~pgG~lv 171 (210)
T 3lbf_A 153 PPEIPTALMTQLDEGGILV 171 (210)
T ss_dssp CSSCCTHHHHTEEEEEEEE
T ss_pred hhhhhHHHHHhcccCcEEE
Confidence 356667778888877654
No 14
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.47 E-value=5.9e-13 Score=122.25 Aligned_cols=142 Identities=18% Similarity=0.208 Sum_probs=109.5
Q ss_pred HHHHHHHhhhcCCCChHHHHHHHHhcCC---Cc---------------cccCCCccCCCHHHHHHHHHHhcCCCCCEEEE
Q 015990 86 AASACIVCARSQDDDYHATIKALNSKGR---FP---------------RKSLGQHYMLNSEINDQLAAAAAVQEGDIVLE 147 (397)
Q Consensus 86 ar~~mv~~~~~~~~~~~~~~~~l~~~~~---~~---------------~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLE 147 (397)
||.+|+.+|+. ++.+.+++..... .+ ....||+ +..+.+++.+++.+.+.++.+|||
T Consensus 2 ar~~~~~~~~~----~~~v~~a~~~v~r~~f~~~~~~~~~Y~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vLd 76 (231)
T 1vbf_A 2 SEKEEILRKIK----TQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGIN-TTALNLGIFMLDELDLHKGQKVLE 76 (231)
T ss_dssp CHHHHHHHHCC----CHHHHHHHHHSCHHHHSCGGGGGGSSSSTTCCEEEETTEE-ECCHHHHHHHHHHTTCCTTCEEEE
T ss_pred cHHHHHHHHhC----CHHHHHHHHhCCHHHcCCcchhhhccccCCCceeeCCCCc-cCCHHHHHHHHHhcCCCCCCEEEE
Confidence 46678888765 5666666653211 01 1123554 678899999999999999999999
Q ss_pred EcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 148 IGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 148 IG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
||||+|.++..+++.+.+|+|+|+|+.+++.+++++...++++++.+|+.+... ..+.+|+|+++.++
T Consensus 77 iG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~------------~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 77 IGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE------------EEKPYDRVVVWATA 144 (231)
T ss_dssp ECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG------------GGCCEEEEEESSBB
T ss_pred EcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc------------cCCCccEEEECCcH
Confidence 999999999999999999999999999999999998766689999999987321 12578999888664
Q ss_pred -cCcHHHHHHhccCCCce
Q 015990 228 -NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 228 -~i~s~il~~L~~~g~~~ 244 (397)
++...+...|.++|.++
T Consensus 145 ~~~~~~~~~~L~pgG~l~ 162 (231)
T 1vbf_A 145 PTLLCKPYEQLKEGGIMI 162 (231)
T ss_dssp SSCCHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEE
Confidence 56677777777777553
No 15
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.45 E-value=1.6e-13 Score=122.54 Aligned_cols=96 Identities=21% Similarity=0.334 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHHhcC---CCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccC--CceEEEEccccc
Q 015990 125 LNSEINDQLAAAAAV---QEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVK 198 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~ 198 (397)
....+.+.+++.+.. .++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|++++..+ ++++++++|+.+
T Consensus 25 ~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 104 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAA 104 (189)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHH
T ss_pred CcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHH
Confidence 455666677666643 5788999999999999998888765 7999999999999999998654 389999999987
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
.... ...+.+|+|++|+||+..
T Consensus 105 ~~~~----------~~~~~fD~i~~~~p~~~~ 126 (189)
T 3p9n_A 105 VVAA----------GTTSPVDLVLADPPYNVD 126 (189)
T ss_dssp HHHH----------CCSSCCSEEEECCCTTSC
T ss_pred HHhh----------ccCCCccEEEECCCCCcc
Confidence 6421 023689999999999885
No 16
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.36 E-value=1e-12 Score=115.73 Aligned_cols=91 Identities=14% Similarity=0.296 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccch
Q 015990 127 SEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHI 201 (397)
Q Consensus 127 ~~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~ 201 (397)
..+.+.+++.+. ..++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++...+ +++++.+|+.+...
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID 95 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH
Confidence 345667777776 6678899999999999999999985 599999999999999999987653 79999999987421
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
. ..+.+|+|++|+||.
T Consensus 96 ~-----------~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 96 C-----------LTGRFDLVFLDPPYA 111 (177)
T ss_dssp H-----------BCSCEEEEEECCSSH
T ss_pred h-----------hcCCCCEEEECCCCC
Confidence 1 225699999999984
No 17
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=1e-11 Score=112.69 Aligned_cols=147 Identities=20% Similarity=0.226 Sum_probs=111.9
Q ss_pred HHHHHHHHhh-hcCCCChHHHHHHHHhcCC---Cccc-------------cCCCccCCCHHHHHHHHHHhcCCCCCEEEE
Q 015990 85 GAASACIVCA-RSQDDDYHATIKALNSKGR---FPRK-------------SLGQHYMLNSEINDQLAAAAAVQEGDIVLE 147 (397)
Q Consensus 85 ~ar~~mv~~~-~~~~~~~~~~~~~l~~~~~---~~~k-------------~~GQnfl~~~~i~~~i~~~~~~~~~~~VLE 147 (397)
.+|..|+++. .++++.++.+..++..... .+.. ..|+ .+..+.+...+++.+.+.++.+|||
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~v~~a~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vLd 83 (215)
T 2yxe_A 5 EQKKAVIEKLIREGYIKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQ-TISAIHMVGMMCELLDLKPGMKVLE 83 (215)
T ss_dssp HHHHHHHHHHHHHTSCCCHHHHHHHHHSCGGGGSCGGGGGGTTSCSCEEEETTE-EECCHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHhHHhcCCCCHHHHHHHHhCCHHHcCCchhhhhcccCCCccCCCCc-EeCcHHHHHHHHHhhCCCCCCEEEE
Confidence 4677888776 3888999999998875322 1111 1233 3466889999999999899999999
Q ss_pred EcCcccHHHHHHHHcC---CcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCCCCcceEe
Q 015990 148 IGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVV 222 (397)
Q Consensus 148 IG~G~G~lt~~La~~~---~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv 222 (397)
||||+|.++..+++.+ .+|+++|+++.+++.+++++... ++++++.+|+..... ..+.+|+|+
T Consensus 84 iG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------------~~~~fD~v~ 151 (215)
T 2yxe_A 84 IGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE------------PLAPYDRIY 151 (215)
T ss_dssp ECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG------------GGCCEEEEE
T ss_pred ECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC------------CCCCeeEEE
Confidence 9999999999999975 79999999999999999987543 479999999854321 125799999
Q ss_pred ecCCC-cCcHHHHHHhccCCCce
Q 015990 223 ANIPF-NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 223 ~NlPy-~i~s~il~~L~~~g~~~ 244 (397)
++.++ ++...+...|.++|.++
T Consensus 152 ~~~~~~~~~~~~~~~L~pgG~lv 174 (215)
T 2yxe_A 152 TTAAGPKIPEPLIRQLKDGGKLL 174 (215)
T ss_dssp ESSBBSSCCHHHHHTEEEEEEEE
T ss_pred ECCchHHHHHHHHHHcCCCcEEE
Confidence 88765 45566777777776543
No 18
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.35 E-value=2.9e-12 Score=113.52 Aligned_cols=96 Identities=15% Similarity=0.267 Sum_probs=74.2
Q ss_pred cCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 138 AVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 138 ~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+.++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++... ++++++++|+..+... ..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~-----------~~ 87 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY-----------VR 87 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT-----------CC
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh-----------cc
Confidence 4568899999999999999999999899999999999999999998643 5899999887765311 23
Q ss_pred CCcceEeecCCCcCc----------------HHHHHHhccCCCce
Q 015990 216 SGFAKVVANIPFNIS----------------TDVIKQLLPMGDIF 244 (397)
Q Consensus 216 ~~~d~Vv~NlPy~i~----------------s~il~~L~~~g~~~ 244 (397)
+.+|.|+.|++|.-. ..+.+.|+++|.++
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 132 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLA 132 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEE
Confidence 579999999876322 33455667777553
No 19
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.34 E-value=1.9e-11 Score=109.34 Aligned_cols=85 Identities=15% Similarity=0.274 Sum_probs=70.4
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~ 205 (397)
..+....+.++++|||+|||+|.++..+++. .++|+|+|+|+.+++.|++++... ++++++++|+.++...
T Consensus 13 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--- 89 (197)
T 3eey_A 13 HDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY--- 89 (197)
T ss_dssp HHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT---
T ss_pred HHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh---
Confidence 3344456778899999999999999999986 259999999999999999998764 4899999999876421
Q ss_pred hhHHhhhcCCCCcceEeecCCC
Q 015990 206 LSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
..+.+|+|++|+||
T Consensus 90 --------~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 90 --------IDCPVKAVMFNLGY 103 (197)
T ss_dssp --------CCSCEEEEEEEESB
T ss_pred --------ccCCceEEEEcCCc
Confidence 23679999999988
No 20
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.34 E-value=8.8e-12 Score=126.51 Aligned_cols=102 Identities=18% Similarity=0.221 Sum_probs=85.6
Q ss_pred CccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---------------CCcEEEEeCCHHHHHH
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---------------GATVLAIEKDQHMVGL 178 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---------------~~~V~~vE~d~~~i~~ 178 (397)
..++..|| |.+++.+++.|++.+.+.++.+|||+|||+|.+...+++. ..+++|+|+|+.+++.
T Consensus 145 ~~~~~~G~-fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~l 223 (445)
T 2okc_A 145 DKKSGAGQ-YFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTL 223 (445)
T ss_dssp CTTTCCGG-GCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHH
T ss_pred hccccCCc-ccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHH
Confidence 34566788 6699999999999999888899999999999999888763 3689999999999999
Q ss_pred HHHHhccCC----ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 179 VRERFASID----QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 179 a~~~~~~~~----~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
|+.++..++ ++++.++|++..+. ...+|+|++||||..
T Consensus 224 A~~nl~l~g~~~~~~~i~~gD~l~~~~-------------~~~fD~Iv~NPPf~~ 265 (445)
T 2okc_A 224 ASMNLYLHGIGTDRSPIVCEDSLEKEP-------------STLVDVILANPPFGT 265 (445)
T ss_dssp HHHHHHHTTCCSSCCSEEECCTTTSCC-------------SSCEEEEEECCCSSC
T ss_pred HHHHHHHhCCCcCCCCEeeCCCCCCcc-------------cCCcCEEEECCCCCC
Confidence 999875332 67899999988643 247999999999975
No 21
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.34 E-value=3.7e-12 Score=116.81 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=75.3
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCc-ccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPG-TGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCH 200 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G-~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~ 200 (397)
+.++...+.++....+.++.+|||+||| +|.++..+++. +.+|+|+|+|+.+++.|++++..++ +++++++|+....
T Consensus 38 ~~p~~~~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 117 (230)
T 3evz_A 38 LVTTPISRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK 117 (230)
T ss_dssp CCCCHHHHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSST
T ss_pred EeCCCchhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhh
Confidence 3344445555344456788999999999 99999999998 8899999999999999999987655 8999999975442
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.. ..+.+|+|++|+||..
T Consensus 118 ~~-----------~~~~fD~I~~npp~~~ 135 (230)
T 3evz_A 118 GV-----------VEGTFDVIFSAPPYYD 135 (230)
T ss_dssp TT-----------CCSCEEEEEECCCCC-
T ss_pred hc-----------ccCceeEEEECCCCcC
Confidence 10 2367999999999965
No 22
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.33 E-value=9e-12 Score=111.96 Aligned_cols=98 Identities=18% Similarity=0.253 Sum_probs=75.4
Q ss_pred ccccCCCccCCCHHHHHHHHHHhc---CCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCceE
Q 015990 115 PRKSLGQHYMLNSEINDQLAAAAA---VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLK 190 (397)
Q Consensus 115 ~~k~~GQnfl~~~~i~~~i~~~~~---~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ 190 (397)
+...++| |..+..+...++..+. ..++++|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++. +++
T Consensus 23 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~ 98 (200)
T 1ne2_A 23 FKNYLEQ-YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---GVN 98 (200)
T ss_dssp --------CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---TSE
T ss_pred cccceee-cCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---CCE
Confidence 4445566 6778888888776653 55788999999999999999999865 69999999999999999875 789
Q ss_pred EEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcH
Q 015990 191 VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST 231 (397)
Q Consensus 191 ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s 231 (397)
++++|+.+++ +.+|+|++|+||+...
T Consensus 99 ~~~~d~~~~~---------------~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 99 FMVADVSEIS---------------GKYDTWIMNPPFGSVV 124 (200)
T ss_dssp EEECCGGGCC---------------CCEEEEEECCCC----
T ss_pred EEECcHHHCC---------------CCeeEEEECCCchhcc
Confidence 9999998762 4789999999997654
No 23
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.33 E-value=1.9e-11 Score=110.91 Aligned_cols=111 Identities=17% Similarity=0.188 Sum_probs=89.1
Q ss_pred ccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--C-ceEEEEccccc
Q 015990 122 HYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--D-QLKVLQEDFVK 198 (397)
Q Consensus 122 nfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~-~v~ii~gD~~~ 198 (397)
+.+..+.+...+++.+.+.++++|||+|||+|.++..+++.+.+|+|+|+|+++++.|++++... + +++++++|+.+
T Consensus 36 ~~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 36 GQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp SCCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred CCCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 34677888888999999999999999999999999999999889999999999999999987643 3 79999999987
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCc--CcHHHHHHhccCCCce
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN--ISTDVIKQLLPMGDIF 244 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~--i~s~il~~L~~~g~~~ 244 (397)
... ..+.+|.|+.+.... +...+.+.|.++|.++
T Consensus 116 ~~~------------~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv 151 (204)
T 3njr_A 116 ALA------------DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIV 151 (204)
T ss_dssp GGT------------TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEE
T ss_pred hcc------------cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEE
Confidence 421 124689999885442 2344555677777654
No 24
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.33 E-value=2.4e-11 Score=112.25 Aligned_cols=148 Identities=16% Similarity=0.178 Sum_probs=110.6
Q ss_pred HHHHHHHHHhhh-cCCCChHHHHHHHHhcCC---Cccc-------------cCCCccCCCHHHHHHHHHHhcCCCCCEEE
Q 015990 84 KGAASACIVCAR-SQDDDYHATIKALNSKGR---FPRK-------------SLGQHYMLNSEINDQLAAAAAVQEGDIVL 146 (397)
Q Consensus 84 ~~ar~~mv~~~~-~~~~~~~~~~~~l~~~~~---~~~k-------------~~GQnfl~~~~i~~~i~~~~~~~~~~~VL 146 (397)
..++..|++... ...+.++.+.+.+..... .+.. ..|+ ....+.+...+++.+.+.++++||
T Consensus 18 ~~~~~~l~~~l~~~~~~~~~~~~~a~~~v~r~~f~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~vL 96 (235)
T 1jg1_A 18 YEKWMRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQ-TVSAPHMVAIMLEIANLKPGMNIL 96 (235)
T ss_dssp HHHHHHHHHHHHHTTSCCSHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECSTTC-EECCHHHHHHHHHHHTCCTTCCEE
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCHhhhCCchhhhcCccCCCcccCCCc-eeccHHHHHHHHHhcCCCCCCEEE
Confidence 356677887765 666777888877764321 2211 1133 456788999999999999999999
Q ss_pred EEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCCCCcceEee
Q 015990 147 EIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVA 223 (397)
Q Consensus 147 EIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~ 223 (397)
|||||+|.++..+++.+ .+|+++|+++.+++.|++++... ++++++.+|+. ..+. ....+|+|++
T Consensus 97 diG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~-----------~~~~fD~Ii~ 164 (235)
T 1jg1_A 97 EVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS-KGFP-----------PKAPYDVIIV 164 (235)
T ss_dssp EECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-GCCG-----------GGCCEEEEEE
T ss_pred EEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc-cCCC-----------CCCCccEEEE
Confidence 99999999999999986 89999999999999999988654 37999999983 2221 1235899988
Q ss_pred cCCC-cCcHHHHHHhccCCCce
Q 015990 224 NIPF-NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 224 NlPy-~i~s~il~~L~~~g~~~ 244 (397)
+.+. ++...+...|.++|.++
T Consensus 165 ~~~~~~~~~~~~~~L~pgG~lv 186 (235)
T 1jg1_A 165 TAGAPKIPEPLIEQLKIGGKLI 186 (235)
T ss_dssp CSBBSSCCHHHHHTEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCcEEE
Confidence 8664 46677777787877553
No 25
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.32 E-value=2.7e-11 Score=110.86 Aligned_cols=149 Identities=12% Similarity=0.168 Sum_probs=109.1
Q ss_pred HHHHHHhhh-cCCCChHHHHHHHHhcC---CCccc---------cCCCccCCCHHHHHHHHHHh--cCCCCCEEEEEcCc
Q 015990 87 ASACIVCAR-SQDDDYHATIKALNSKG---RFPRK---------SLGQHYMLNSEINDQLAAAA--AVQEGDIVLEIGPG 151 (397)
Q Consensus 87 r~~mv~~~~-~~~~~~~~~~~~l~~~~---~~~~k---------~~GQnfl~~~~i~~~i~~~~--~~~~~~~VLEIG~G 151 (397)
+..|+++.. ...+....+...+.... +.|.. ..|+ .+..+.+...+++.+ .+.++++|||||||
T Consensus 12 ~~~~~~~l~~~~~~~~~~v~~~~~~~~r~~f~p~~~y~d~~~~~~~~~-~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G 90 (227)
T 2pbf_A 12 HKSLLENLKRRGIIDDDDVYNTMLQVDRGKYIKEIPYIDTPVYISHGV-TISAPHMHALSLKRLINVLKPGSRAIDVGSG 90 (227)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSSTTSSSCEEEETTE-EECCHHHHHHHHHHHTTTSCTTCEEEEESCT
T ss_pred HHHHHHHHHhcCCcCCHHHHHHHHhCCHHHcCCcccCCCCccccCCCC-ccCChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 456777766 44467888888886432 12211 1233 466788999999988 47888999999999
Q ss_pred ccHHHHHHHHcCC-------cEEEEeCCHHHHHHHHHHhccC-------CceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 152 TGSLTNVLLNAGA-------TVLAIEKDQHMVGLVRERFASI-------DQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 152 ~G~lt~~La~~~~-------~V~~vE~d~~~i~~a~~~~~~~-------~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
+|.++..+++... +|+++|+++.+++.|++++... ++++++.+|+.+..... . . ....
T Consensus 91 ~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~---~----~~~~ 162 (227)
T 2pbf_A 91 SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE-K---K----ELGL 162 (227)
T ss_dssp TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH-H---H----HHCC
T ss_pred CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc-C---c----cCCC
Confidence 9999999999754 9999999999999999987542 48999999998753100 0 0 1257
Q ss_pred cceEeecCCC-cCcHHHHHHhccCCCce
Q 015990 218 FAKVVANIPF-NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 218 ~d~Vv~NlPy-~i~s~il~~L~~~g~~~ 244 (397)
+|+|+.+.+. ++...+...|.++|.++
T Consensus 163 fD~I~~~~~~~~~~~~~~~~LkpgG~lv 190 (227)
T 2pbf_A 163 FDAIHVGASASELPEILVDLLAENGKLI 190 (227)
T ss_dssp EEEEEECSBBSSCCHHHHHHEEEEEEEE
T ss_pred cCEEEECCchHHHHHHHHHhcCCCcEEE
Confidence 8999988775 45677777777877654
No 26
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.31 E-value=4.1e-12 Score=119.31 Aligned_cols=88 Identities=15% Similarity=0.254 Sum_probs=71.6
Q ss_pred HHHHhcCC-CCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhh
Q 015990 133 LAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 133 i~~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~ 207 (397)
+...+.+. ++++|||+|||+|.++..+++++. +|+|+|+|+.+++.|++++..++ +++++++|+.+....
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~----- 114 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL----- 114 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-----
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-----
Confidence 44556777 889999999999999999999865 99999999999999999987543 699999999887421
Q ss_pred HHhhhcCCCCcceEeecCCCcCc
Q 015990 208 LFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
...+.+|+|++|+||...
T Consensus 115 -----~~~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 115 -----IPKERADIVTCNPPYFAT 132 (259)
T ss_dssp -----SCTTCEEEEEECCCC---
T ss_pred -----hccCCccEEEECCCCCCC
Confidence 023689999999999654
No 27
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.30 E-value=7.3e-12 Score=113.49 Aligned_cols=102 Identities=15% Similarity=0.056 Sum_probs=79.0
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc--------------CCceEEEEcc
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS--------------IDQLKVLQED 195 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~--------------~~~v~ii~gD 195 (397)
+.++++.+.+.++.+|||+|||+|..+..|+++|.+|+|||+|+.|++.|+++... .++++++++|
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d 90 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD 90 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECc
Confidence 33445667777889999999999999999999999999999999999999998652 3589999999
Q ss_pred ccccchhhhhhhHHhhhcCCCCcceEeecCCCc-CcH--------HHHHHhccCCC
Q 015990 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN-IST--------DVIKQLLPMGD 242 (397)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~-i~s--------~il~~L~~~g~ 242 (397)
+.++++.+ .+.||.|+++..++ +.. .+.+.|+++|.
T Consensus 91 ~~~l~~~~-----------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 91 FFALTARD-----------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp CSSSTHHH-----------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred cccCCccc-----------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 99886531 14789998765543 222 34455667665
No 28
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.29 E-value=7e-12 Score=110.42 Aligned_cols=84 Identities=24% Similarity=0.254 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHhcC--CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchh
Q 015990 125 LNSEINDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIR 202 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~--~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~ 202 (397)
++....+.+++.+.. .++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. .++++++++|+.+. +
T Consensus 5 ~P~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-------~~~~~~~~~d~~~~-~- 74 (170)
T 3q87_B 5 EPGEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-------HRGGNLVRADLLCS-I- 74 (170)
T ss_dssp CCCHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-------CSSSCEEECSTTTT-B-
T ss_pred CcCccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-------ccCCeEEECChhhh-c-
Confidence 333444556666554 567899999999999999999999 99999999999987 35789999999873 2
Q ss_pred hhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
..+.+|+|++|+||..
T Consensus 75 -----------~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 75 -----------NQESVDVVVFNPPYVP 90 (170)
T ss_dssp -----------CGGGCSEEEECCCCBT
T ss_pred -----------ccCCCCEEEECCCCcc
Confidence 1257999999999974
No 29
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.29 E-value=2.7e-11 Score=117.31 Aligned_cols=141 Identities=15% Similarity=0.144 Sum_probs=105.7
Q ss_pred HHHhhh-cCCCChHHHHHHHHhcCCC---cc---------------ccCC---CccCCCHHHHHHHHHHhcCCCCCEEEE
Q 015990 90 CIVCAR-SQDDDYHATIKALNSKGRF---PR---------------KSLG---QHYMLNSEINDQLAAAAAVQEGDIVLE 147 (397)
Q Consensus 90 mv~~~~-~~~~~~~~~~~~l~~~~~~---~~---------------k~~G---Qnfl~~~~i~~~i~~~~~~~~~~~VLE 147 (397)
|+..++ ++++.+ .+..++...... +. -..| | ....+.+.+.+++.+.+.++++|||
T Consensus 4 ~~~~~l~~~gi~~-~v~~a~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~~f~q-~~~~~~~~~~l~~~l~~~~~~~VLD 81 (317)
T 1dl5_A 4 KLFWILKKYGVSD-HIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYS-TSSQPSLMALFMEWVGLDKGMRVLE 81 (317)
T ss_dssp HHHHHHHHTTCCH-HHHHHHHHSCGGGGCSSCCCHHHHTSSSCEEEEECSSCEE-EECCHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHcCChH-HHHHHHHhCCHHHhCCchhccccCccCCCcccccCCCcce-eccCHHHHHHHHHhcCCCCcCEEEE
Confidence 455556 777777 777777543221 10 0112 3 2346788999999999999999999
Q ss_pred EcCcccHHHHHHHHcCCc---EEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCCCCcceEe
Q 015990 148 IGPGTGSLTNVLLNAGAT---VLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVV 222 (397)
Q Consensus 148 IG~G~G~lt~~La~~~~~---V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv 222 (397)
||||+|.++..+++.+.+ |+|+|+|+++++.|++++... ++++++.+|+.+.... .+.+|+|+
T Consensus 82 iGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~------------~~~fD~Iv 149 (317)
T 1dl5_A 82 IGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE------------FSPYDVIF 149 (317)
T ss_dssp ECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG------------GCCEEEEE
T ss_pred ecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc------------CCCeEEEE
Confidence 999999999999987554 999999999999999998654 3799999999875321 25799999
Q ss_pred ecCCC-cCcHHHHHHhccCCCce
Q 015990 223 ANIPF-NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 223 ~NlPy-~i~s~il~~L~~~g~~~ 244 (397)
++.+. ++...+...|.++|.++
T Consensus 150 ~~~~~~~~~~~~~~~LkpgG~lv 172 (317)
T 1dl5_A 150 VTVGVDEVPETWFTQLKEGGRVI 172 (317)
T ss_dssp ECSBBSCCCHHHHHHEEEEEEEE
T ss_pred EcCCHHHHHHHHHHhcCCCcEEE
Confidence 99776 45566777777777543
No 30
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.29 E-value=9.8e-12 Score=117.47 Aligned_cols=76 Identities=22% Similarity=0.355 Sum_probs=65.0
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHc----CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhhhhHHhh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNA----GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~----~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
++++.+|||+|||+|.++..|++. +++|+|||+++.|++.|++++... .+++++++|+.++++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~---------- 137 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI---------- 137 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC----------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc----------
Confidence 578899999999999999999985 558999999999999999997654 389999999998754
Q ss_pred hcCCCCcceEeecCCCc
Q 015990 212 RKSSSGFAKVVANIPFN 228 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~ 228 (397)
+.+|+|+++.-.+
T Consensus 138 ----~~~d~v~~~~~l~ 150 (261)
T 4gek_A 138 ----ENASMVVLNFTLQ 150 (261)
T ss_dssp ----CSEEEEEEESCGG
T ss_pred ----cccccceeeeeee
Confidence 4588999886543
No 31
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.28 E-value=3.8e-11 Score=108.14 Aligned_cols=109 Identities=15% Similarity=0.224 Sum_probs=88.5
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccC--CceEEEEcccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKC 199 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~ 199 (397)
+..+.+...+++.+.+.++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... ++++++++|+.+.
T Consensus 23 ~~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 23 ITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG 102 (204)
T ss_dssp SCCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT
T ss_pred CChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh
Confidence 4778888899999999999999999999999999999986 79999999999999999987643 4899999999765
Q ss_pred chhhhhhhHHhhhcCCCCcceEeecCCCcCcHH----HHHHhccCCCce
Q 015990 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNISTD----VIKQLLPMGDIF 244 (397)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~----il~~L~~~g~~~ 244 (397)
.. ..+.+|+|+.+.++..... +.+.|.++|.++
T Consensus 103 ~~------------~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~ 139 (204)
T 3e05_A 103 LD------------DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIV 139 (204)
T ss_dssp CT------------TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEE
T ss_pred hh------------cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEE
Confidence 32 1256899999987654443 444566777654
No 32
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.28 E-value=1.1e-11 Score=123.37 Aligned_cols=110 Identities=13% Similarity=0.170 Sum_probs=85.5
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHHhc---------c--CCceEE
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFA---------S--IDQLKV 191 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~~~---------~--~~~v~i 191 (397)
+.+..+..+++.+.+.++++|||||||+|.++..++.. ++ +|+|||+++.+++.|+++.+ . .+++++
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 34778899999999999999999999999999999865 55 59999999999999987532 1 258999
Q ss_pred EEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcH------HHHHHhccCCCce
Q 015990 192 LQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDIF 244 (397)
Q Consensus 192 i~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s------~il~~L~~~g~~~ 244 (397)
++||+.+.++.+.+ ..+|+|++|.+|.... ++++.|+++|.++
T Consensus 237 i~GD~~~lp~~d~~----------~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIV 285 (438)
T 3uwp_A 237 ERGDFLSEEWRERI----------ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIV 285 (438)
T ss_dssp EECCTTSHHHHHHH----------HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEE
T ss_pred EECcccCCcccccc----------CCccEEEEcccccCchHHHHHHHHHHcCCCCcEEE
Confidence 99999998654211 3689999998875432 3445566666554
No 33
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.27 E-value=1.4e-11 Score=111.47 Aligned_cols=93 Identities=17% Similarity=0.191 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHhcCC-CCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccch
Q 015990 126 NSEINDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHI 201 (397)
Q Consensus 126 ~~~i~~~i~~~~~~~-~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~ 201 (397)
...+.+.+++.+... ++.+|||+|||+|.++..++.++ .+|+|+|+|+.+++.|++++...+ +++++++|+.+...
T Consensus 38 ~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~ 117 (202)
T 2fpo_A 38 TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA 117 (202)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh
Confidence 345666666666543 67899999999999999988876 489999999999999999986553 89999999877421
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
. ..+.+|+|++|+||..
T Consensus 118 ~-----------~~~~fD~V~~~~p~~~ 134 (202)
T 2fpo_A 118 Q-----------KGTPHNIVFVDPPFRR 134 (202)
T ss_dssp S-----------CCCCEEEEEECCSSST
T ss_pred h-----------cCCCCCEEEECCCCCC
Confidence 1 2357999999999873
No 34
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.27 E-value=1.9e-11 Score=121.27 Aligned_cols=94 Identities=18% Similarity=0.234 Sum_probs=81.5
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC--cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA--TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~ 198 (397)
...+.+...++..+ ..++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|++++...+ +++++++|+.+
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQ 279 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGG
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 45788999999988 88899999999999999999999876 99999999999999999987553 79999999998
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
++.. .+.+|+|++|+||...
T Consensus 280 ~~~~------------~~~fD~Ii~npPyg~r 299 (373)
T 3tm4_A 280 LSQY------------VDSVDFAISNLPYGLK 299 (373)
T ss_dssp GGGT------------CSCEEEEEEECCCC--
T ss_pred CCcc------------cCCcCEEEECCCCCcc
Confidence 7642 2579999999999753
No 35
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.27 E-value=1.8e-11 Score=120.28 Aligned_cols=95 Identities=21% Similarity=0.220 Sum_probs=83.7
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC---CcEEEEeCCHHHHHHHHHHhccCC--ceEEEEcccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFV 197 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~ 197 (397)
....+.++..++..+...++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.|++++...+ +++++++|+.
T Consensus 185 a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~ 264 (354)
T 3tma_A 185 GSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADAR 264 (354)
T ss_dssp CSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGG
T ss_pred CCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChh
Confidence 45778899999999999999999999999999999999965 799999999999999999987655 7999999999
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+++.. ...+|+|++|+||..
T Consensus 265 ~~~~~------------~~~~D~Ii~npPyg~ 284 (354)
T 3tma_A 265 HLPRF------------FPEVDRILANPPHGL 284 (354)
T ss_dssp GGGGT------------CCCCSEEEECCCSCC
T ss_pred hCccc------------cCCCCEEEECCCCcC
Confidence 87542 245799999999965
No 36
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.27 E-value=4.2e-11 Score=109.89 Aligned_cols=145 Identities=18% Similarity=0.253 Sum_probs=107.9
Q ss_pred HHHHHHhhh-cCCCChHHHHHHHHhcCC---Ccc---------ccCCCccCCCHHHHHHHHHHh--cCCCCCEEEEEcCc
Q 015990 87 ASACIVCAR-SQDDDYHATIKALNSKGR---FPR---------KSLGQHYMLNSEINDQLAAAA--AVQEGDIVLEIGPG 151 (397)
Q Consensus 87 r~~mv~~~~-~~~~~~~~~~~~l~~~~~---~~~---------k~~GQnfl~~~~i~~~i~~~~--~~~~~~~VLEIG~G 151 (397)
+..|++... .+.+.+..+.+++..... .|. ...|| ++..+.+...+++.+ .+.++++|||||||
T Consensus 16 ~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~y~d~~~~~~~~~-~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G 94 (227)
T 1r18_A 16 NEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGV-TISAPHMHAFALEYLRDHLKPGARILDVGSG 94 (227)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSCTTBSSCEEEETTE-EECCHHHHHHHHHHTTTTCCTTCEEEEESCT
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHhCCHHHcCCcccccCCCcccCCCC-ccCChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 345666666 444667888888864321 221 12344 566899999999998 47788999999999
Q ss_pred ccHHHHHHHHc-C-------CcEEEEeCCHHHHHHHHHHhcc-------CCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 152 TGSLTNVLLNA-G-------ATVLAIEKDQHMVGLVRERFAS-------IDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 152 ~G~lt~~La~~-~-------~~V~~vE~d~~~i~~a~~~~~~-------~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
+|+++..+++. + .+|+++|+++++++.|++++.. .++++++.+|+.+. +. ...
T Consensus 95 ~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~-----------~~~ 162 (227)
T 1r18_A 95 SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG-YP-----------PNA 162 (227)
T ss_dssp TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC-CG-----------GGC
T ss_pred ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC-CC-----------cCC
Confidence 99999999985 4 4899999999999999998754 24899999999873 21 125
Q ss_pred CcceEeecCCC-cCcHHHHHHhccCCCce
Q 015990 217 GFAKVVANIPF-NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 217 ~~d~Vv~NlPy-~i~s~il~~L~~~g~~~ 244 (397)
.+|+|+.+.+. ++...+...|.++|.++
T Consensus 163 ~fD~I~~~~~~~~~~~~~~~~LkpgG~lv 191 (227)
T 1r18_A 163 PYNAIHVGAAAPDTPTELINQLASGGRLI 191 (227)
T ss_dssp SEEEEEECSCBSSCCHHHHHTEEEEEEEE
T ss_pred CccEEEECCchHHHHHHHHHHhcCCCEEE
Confidence 78999988765 45677778888877653
No 37
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.26 E-value=3.7e-11 Score=106.09 Aligned_cols=90 Identities=17% Similarity=0.320 Sum_probs=78.1
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC--c--eEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--Q--LKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~--~--v~ii~gD~~~~~~~~ 203 (397)
...+.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++...+ + ++++.+|+.+..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--- 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--- 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC---
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc---
Confidence 677888999988889999999999999999999998899999999999999999986543 4 999999998742
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
..+.+|+|++|+||+..
T Consensus 116 ----------~~~~~D~v~~~~~~~~~ 132 (194)
T 1dus_A 116 ----------KDRKYNKIITNPPIRAG 132 (194)
T ss_dssp ----------TTSCEEEEEECCCSTTC
T ss_pred ----------ccCCceEEEECCCcccc
Confidence 12579999999999863
No 38
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.26 E-value=2.1e-11 Score=123.37 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccchhhh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~~~~ 204 (397)
+.+++.+++.+.+.++++|||+|||+|.++..|++.+.+|+|+|+|+.+++.|++++..++ |++++++|+.+......
T Consensus 272 e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 272 QKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred HHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 4466777778888888999999999999999999998899999999999999999986554 89999999987421000
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhcc
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLP 239 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~ 239 (397)
...+.+|+|++|+||.-..+++..+..
T Consensus 352 --------~~~~~fD~Vv~dPPr~g~~~~~~~l~~ 378 (433)
T 1uwv_A 352 --------WAKNGFDKVLLDPARAGAAGVMQQIIK 378 (433)
T ss_dssp --------GGTTCCSEEEECCCTTCCHHHHHHHHH
T ss_pred --------hhcCCCCEEEECCCCccHHHHHHHHHh
Confidence 012479999999999877788777754
No 39
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.25 E-value=2.1e-11 Score=105.89 Aligned_cols=106 Identities=13% Similarity=0.109 Sum_probs=80.7
Q ss_pred cCCCHHHHHHHHHHhcC--CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEcccccc
Q 015990 123 YMLNSEINDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKC 199 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~--~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~ 199 (397)
......+.+.+++.+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+ +++++++|+.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 100 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVF 100 (171)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHH
T ss_pred CCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHH
Confidence 34556777778777753 277899999999999999999998889999999999999999886544 899999999874
Q ss_pred chhhhhhhHHhhhcCCCCcceEeecCCCc-CcHHHHHH
Q 015990 200 HIRSHMLSLFERRKSSSGFAKVVANIPFN-ISTDVIKQ 236 (397)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~-i~s~il~~ 236 (397)
... ... ..+.+|+|++|+||. ...+++..
T Consensus 101 ~~~-----~~~---~~~~~D~i~~~~~~~~~~~~~~~~ 130 (171)
T 1ws6_A 101 LPE-----AKA---QGERFTVAFMAPPYAMDLAALFGE 130 (171)
T ss_dssp HHH-----HHH---TTCCEEEEEECCCTTSCTTHHHHH
T ss_pred HHh-----hhc---cCCceEEEEECCCCchhHHHHHHH
Confidence 211 000 124799999999984 33334433
No 40
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.25 E-value=1.4e-11 Score=113.86 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=77.2
Q ss_pred CCHHHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccc
Q 015990 125 LNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCH 200 (397)
Q Consensus 125 ~~~~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~ 200 (397)
.+..+.+.++..+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+ +++++++|+.+..
T Consensus 61 ~~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 140 (241)
T 3gdh_A 61 TPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA 140 (241)
T ss_dssp CCHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG
T ss_pred CHHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc
Confidence 34445666665543 3378899999999999999999999999999999999999999986543 8999999998874
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcCcH
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNIST 231 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s 231 (397)
. ...+|+|++|+||+...
T Consensus 141 ~-------------~~~~D~v~~~~~~~~~~ 158 (241)
T 3gdh_A 141 S-------------FLKADVVFLSPPWGGPD 158 (241)
T ss_dssp G-------------GCCCSEEEECCCCSSGG
T ss_pred c-------------cCCCCEEEECCCcCCcc
Confidence 2 25799999999997654
No 41
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=7.8e-11 Score=103.15 Aligned_cols=107 Identities=16% Similarity=0.240 Sum_probs=86.9
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCH 200 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~ 200 (397)
....+.+.+.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++... ++++++++|+.+ .
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V 95 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c
Confidence 3566888899999999888999999999999999999997789999999999999999998655 479999999987 3
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhc--cCCCc
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLL--PMGDI 243 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~--~~g~~ 243 (397)
+. .+.+|+|+++.| .....++..+. ++|.+
T Consensus 96 ~~------------~~~~D~i~~~~~-~~~~~~l~~~~~~~gG~l 127 (183)
T 2yxd_A 96 LD------------KLEFNKAFIGGT-KNIEKIIEILDKKKINHI 127 (183)
T ss_dssp GG------------GCCCSEEEECSC-SCHHHHHHHHHHTTCCEE
T ss_pred cc------------CCCCcEEEECCc-ccHHHHHHHHhhCCCCEE
Confidence 22 257999999988 44455554443 55544
No 42
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.25 E-value=1.8e-11 Score=119.92 Aligned_cols=100 Identities=14% Similarity=0.182 Sum_probs=77.5
Q ss_pred ccccCCCccCCCHHHHHHHHHHh----cCCCCCEEEEEcCcccHHHHHHHHcC-------CcEEEEeCCHHHHHHHHHHh
Q 015990 115 PRKSLGQHYMLNSEINDQLAAAA----AVQEGDIVLEIGPGTGSLTNVLLNAG-------ATVLAIEKDQHMVGLVRERF 183 (397)
Q Consensus 115 ~~k~~GQnfl~~~~i~~~i~~~~----~~~~~~~VLEIG~G~G~lt~~La~~~-------~~V~~vE~d~~~i~~a~~~~ 183 (397)
.....|+. .++..+...|...+ ...++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.|+.++
T Consensus 101 ~~~~~g~~-~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~ 179 (344)
T 2f8l_A 101 HGIQVNHQ-MTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGA 179 (344)
T ss_dssp SSCCGGGC-CCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHH
T ss_pred cccccCcC-CChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHH
Confidence 44567885 47777765544433 45567899999999999999988753 68999999999999999987
Q ss_pred ccCC-ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 184 ASID-QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 184 ~~~~-~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
...+ +++++++|++.... ...+|+|++|+||.
T Consensus 180 ~~~g~~~~i~~~D~l~~~~-------------~~~fD~Ii~NPPfg 212 (344)
T 2f8l_A 180 DLQRQKMTLLHQDGLANLL-------------VDPVDVVISDLPVG 212 (344)
T ss_dssp HHHTCCCEEEESCTTSCCC-------------CCCEEEEEEECCCS
T ss_pred HhCCCCceEEECCCCCccc-------------cCCccEEEECCCCC
Confidence 5433 68999999887431 25799999999974
No 43
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.24 E-value=2.9e-11 Score=113.64 Aligned_cols=108 Identities=11% Similarity=-0.013 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhc-------------------c
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFA-------------------S 185 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~-------------------~ 185 (397)
.++.+.+.+.......++.+|||+|||+|..+..|++.|.+|+|||+++.|++.|+++.. .
T Consensus 52 ~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 52 GHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp CCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred CCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 445566555554455678899999999999999999999999999999999999987763 1
Q ss_pred CCceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCc---------HHHHHHhccCCCc
Q 015990 186 IDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS---------TDVIKQLLPMGDI 243 (397)
Q Consensus 186 ~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~---------s~il~~L~~~g~~ 243 (397)
..+++++++|+.+++.. ..+.||+|+.+..+... ..+.+.|+++|.+
T Consensus 132 ~~~i~~~~~D~~~l~~~-----------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPRA-----------NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp TSSEEEEESCTTTGGGG-----------CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEE
T ss_pred CCceEEEECccccCCcc-----------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEE
Confidence 25899999999987642 12579999977544221 2344556677765
No 44
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.24 E-value=4.8e-11 Score=105.27 Aligned_cols=97 Identities=16% Similarity=0.345 Sum_probs=77.3
Q ss_pred CCCHHHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccc
Q 015990 124 MLNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVK 198 (397)
Q Consensus 124 l~~~~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~ 198 (397)
...+.+.+.+++.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... ++++++++|+.+
T Consensus 26 p~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp CCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 345677888888874 4578899999999999999988876 58999999999999999988653 379999999987
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.... +. ...+.+|+|++|+||.
T Consensus 106 ~~~~-----~~---~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 106 ALEQ-----FY---EEKLQFDLVLLDPPYA 127 (187)
T ss_dssp HHHH-----HH---HTTCCEEEEEECCCGG
T ss_pred HHHH-----HH---hcCCCCCEEEECCCCC
Confidence 5321 00 0136799999999986
No 45
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.24 E-value=3.6e-11 Score=105.25 Aligned_cols=109 Identities=13% Similarity=0.170 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~ 198 (397)
++.+.+...+++.+.+.++++|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++...+ ++ ++++|+.+
T Consensus 8 ~t~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 8 LTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp SHHHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred ccHHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 556778888999999999999999999999999999987 6799999999999999999976542 78 88899865
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcC---cHHHHHHhccCCCce
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNI---STDVIKQLLPMGDIF 244 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i---~s~il~~L~~~g~~~ 244 (397)
. +.+ ..+.+|+|+++.+++. ...+.+.|.++|.++
T Consensus 87 ~-~~~----------~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~ 124 (178)
T 3hm2_A 87 A-FDD----------VPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLV 124 (178)
T ss_dssp G-GGG----------CCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEE
T ss_pred h-hhc----------cCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEE
Confidence 2 210 1257999999987764 345556677777654
No 46
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.24 E-value=2.6e-11 Score=125.91 Aligned_cols=171 Identities=14% Similarity=0.133 Sum_probs=111.2
Q ss_pred ccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--------------------CCcEEEEeCCHH
Q 015990 115 PRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--------------------GATVLAIEKDQH 174 (397)
Q Consensus 115 ~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--------------------~~~V~~vE~d~~ 174 (397)
.++..|| |.+++.+++.|++.+.+.++.+|||.+||+|.+...+++. ..+++|+|+|+.
T Consensus 144 ~~~~~G~-fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~ 222 (541)
T 2ar0_A 144 TKSGAGQ-YFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPG 222 (541)
T ss_dssp ------C-CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHH
T ss_pred ccccCCe-eeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHH
Confidence 3466788 7799999999999999888999999999999998887753 137999999999
Q ss_pred HHHHHHHHhccCC--c-----eEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcH----------------
Q 015990 175 MVGLVRERFASID--Q-----LKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST---------------- 231 (397)
Q Consensus 175 ~i~~a~~~~~~~~--~-----v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s---------------- 231 (397)
+++.|+.++...+ + +.+.++|++..+.. ....+|+|++||||....
T Consensus 223 ~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~-----------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~ 291 (541)
T 2ar0_A 223 TRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGE-----------NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQ 291 (541)
T ss_dssp HHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHH-----------TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHH
T ss_pred HHHHHHHHHHHhCCCccccccCCeEeCCCcccccc-----------cccCCeEEEECCCcccccchhhHhhcCCCCCchH
Confidence 9999999875433 3 78999998875421 235799999999996532
Q ss_pred -----HHHHHhccCCCceeeeEEeeeHHHHHHHccCCCCCCCccce-eeeeecccCCeEeeeeCCCCccCCCCCceEEEE
Q 015990 232 -----DVIKQLLPMGDIFSEVVLLLQEETALRLVEPSLRTSEYRPI-NIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVT 305 (397)
Q Consensus 232 -----~il~~L~~~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~l-sv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~ 305 (397)
.++..|.++|.+ .+++...+..+ .+ ....+ ..++. -+.+..+..+|.+.| +...|..+|+.
T Consensus 292 ~~Fl~~~l~~Lk~gGr~----a~V~p~~~L~~-----~~--~~~~iR~~L~~-~~~l~~ii~Lp~~~F-~~t~v~t~Ilv 358 (541)
T 2ar0_A 292 LCFMQHIIETLHPGGRA----AVVVPDNVLFE-----GG--KGTDIRRDLMD-KCHLHTILRLPTGIF-YAQGVKTNVLF 358 (541)
T ss_dssp HHHHHHHHHHEEEEEEE----EEEEEHHHHHC-----CT--HHHHHHHHHHH-HEEEEEEEECCSSCS-SSCSCCEEEEE
T ss_pred HHHHHHHHHHhCCCCEE----EEEecCcceec-----Cc--HHHHHHHHHhh-cCCEEEEEEcCcCcc-cCCCCcEEEEE
Confidence 133444555432 33333332111 00 00000 00000 123345667788888 45678888888
Q ss_pred EEecc
Q 015990 306 FKLKQ 310 (397)
Q Consensus 306 l~~~~ 310 (397)
+++.+
T Consensus 359 l~k~~ 363 (541)
T 2ar0_A 359 FTKGT 363 (541)
T ss_dssp EEEBC
T ss_pred EECCC
Confidence 87654
No 47
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.23 E-value=2.4e-11 Score=113.23 Aligned_cols=113 Identities=19% Similarity=0.325 Sum_probs=88.8
Q ss_pred CCccCCC--HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccc
Q 015990 120 GQHYMLN--SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDF 196 (397)
Q Consensus 120 GQnfl~~--~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~ 196 (397)
|.+++.. ....+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++....++++++++|+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~ 111 (266)
T 3ujc_A 32 GENYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDI 111 (266)
T ss_dssp CTTCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCT
T ss_pred CCCccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc
Confidence 4444433 456788888888889999999999999999999997 8899999999999999999987657899999999
Q ss_pred cccchhhhhhhHHhhhcCCCCcceEeecCCCcCc--H-------HHHHHhccCCCce
Q 015990 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS--T-------DVIKQLLPMGDIF 244 (397)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~--s-------~il~~L~~~g~~~ 244 (397)
.+.++. .+.+|+|+++..++.. . .+.+.|.++|.++
T Consensus 112 ~~~~~~------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 156 (266)
T 3ujc_A 112 LTKEFP------------ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLL 156 (266)
T ss_dssp TTCCCC------------TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCCC------------CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEE
Confidence 987642 3679999988665443 2 3344555665543
No 48
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.22 E-value=2.5e-11 Score=116.00 Aligned_cols=90 Identities=19% Similarity=0.263 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIR 202 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~ 202 (397)
..+++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++ +++++++|+.+...
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~- 187 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK- 187 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-
Confidence 345666776665456779999999999999999998 7799999999999999999987553 59999999987421
Q ss_pred hhhhhHHhhhcCCCCc---ceEeecCCCcCc
Q 015990 203 SHMLSLFERRKSSSGF---AKVVANIPFNIS 230 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~---d~Vv~NlPy~i~ 230 (397)
+.| |+|++|+||.-.
T Consensus 188 -------------~~f~~~D~IvsnPPyi~~ 205 (284)
T 1nv8_A 188 -------------EKFASIEMILSNPPYVKS 205 (284)
T ss_dssp -------------GGTTTCCEEEECCCCBCG
T ss_pred -------------cccCCCCEEEEcCCCCCc
Confidence 356 999999999643
No 49
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.21 E-value=3.2e-11 Score=112.72 Aligned_cols=103 Identities=18% Similarity=0.266 Sum_probs=82.2
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~ 207 (397)
++.+++.+...++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|++++... ++++++.+|+.++++.
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~----- 100 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT----- 100 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC-----
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC-----
Confidence 467778888888999999999999999999999889999999999999999987543 4799999999887642
Q ss_pred HHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 208 LFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
.+.+|+|+++...+.. ..+.+.|.++|.++
T Consensus 101 -------~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~ 137 (260)
T 1vl5_A 101 -------DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLL 137 (260)
T ss_dssp -------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEE
Confidence 3679999998655332 23455666776554
No 50
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.21 E-value=1.5e-11 Score=111.44 Aligned_cols=88 Identities=16% Similarity=0.145 Sum_probs=74.1
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~ 207 (397)
.....+...+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++...++++++++|+.+.+.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~------ 111 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFST------ 111 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCC------
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCC------
Confidence 34444555666677889999999999999999999889999999999999999998877799999999988752
Q ss_pred HHhhhcCCCCcceEeecCCCc
Q 015990 208 LFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.+.+|+|+++..++
T Consensus 112 -------~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 112 -------AELFDLIVVAEVLY 125 (216)
T ss_dssp -------SCCEEEEEEESCGG
T ss_pred -------CCCccEEEEccHHH
Confidence 26799999986553
No 51
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.21 E-value=5.8e-12 Score=113.35 Aligned_cols=96 Identities=15% Similarity=0.260 Sum_probs=59.4
Q ss_pred HHHHHHHHHhcC-CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAV-QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~-~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~ 203 (397)
.+++.+++.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ +++++++|+.+ .+.+
T Consensus 16 ~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~ 94 (215)
T 4dzr_A 16 VLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIE 94 (215)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHH
T ss_pred HHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhh
Confidence 455667777665 67889999999999999999998 5599999999999999999987655 78888999887 2221
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCcCcH
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFNIST 231 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~i~s 231 (397)
. . ...+.+|+|++|+||....
T Consensus 95 ~----~---~~~~~fD~i~~npp~~~~~ 115 (215)
T 4dzr_A 95 R----A---ERGRPWHAIVSNPPYIPTG 115 (215)
T ss_dssp H----H---HTTCCBSEEEECCCCCC--
T ss_pred h----h---hccCcccEEEECCCCCCCc
Confidence 0 0 0236899999999996543
No 52
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.21 E-value=3.4e-11 Score=114.32 Aligned_cols=120 Identities=17% Similarity=0.171 Sum_probs=90.0
Q ss_pred CCCccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC--
Q 015990 112 GRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-- 187 (397)
Q Consensus 112 ~~~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~-- 187 (397)
|.......+..|..+....+.+.....+.++++|||+|||+|.++..+++.+ ++|+|+|+++.+++.|++++..++
T Consensus 90 g~~f~~~~~~~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~ 169 (272)
T 3a27_A 90 GCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN 169 (272)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS
T ss_pred CEEEEEechhEEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 3344444455556665555555555567788999999999999999999984 499999999999999999987653
Q ss_pred ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCc---HHHHHHhccCCCce
Q 015990 188 QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS---TDVIKQLLPMGDIF 244 (397)
Q Consensus 188 ~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~---s~il~~L~~~g~~~ 244 (397)
+++++++|+.+.+. .+.+|+|+.|+|+... ..++..|.++|.++
T Consensus 170 ~~~~~~~d~~~~~~-------------~~~~D~Vi~d~p~~~~~~l~~~~~~LkpgG~l~ 216 (272)
T 3a27_A 170 NVIPILADNRDVEL-------------KDVADRVIMGYVHKTHKFLDKTFEFLKDRGVIH 216 (272)
T ss_dssp SEEEEESCGGGCCC-------------TTCEEEEEECCCSSGGGGHHHHHHHEEEEEEEE
T ss_pred CEEEEECChHHcCc-------------cCCceEEEECCcccHHHHHHHHHHHcCCCCEEE
Confidence 89999999988721 2579999999997432 34455666766554
No 53
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.20 E-value=4e-11 Score=119.32 Aligned_cols=89 Identities=26% Similarity=0.395 Sum_probs=73.9
Q ss_pred HHHHHHHHhc--CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhh
Q 015990 129 INDQLAAAAA--VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 129 i~~~i~~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~ 205 (397)
+.+.+.+.+. ..++.+|||+|||+|.++..+++.+.+|++||+|+.+++.|++++..++ +++++++|+.+....
T Consensus 219 ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~--- 295 (381)
T 3dmg_A 219 LLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTE--- 295 (381)
T ss_dssp HHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCT---
T ss_pred HHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcccc---
Confidence 4444444442 3467899999999999999999999999999999999999999987665 689999999887532
Q ss_pred hhHHhhhcCCCCcceEeecCCCcC
Q 015990 206 LSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.+.||+|++|+||+.
T Consensus 296 ---------~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 296 ---------EARFDIIVTNPPFHV 310 (381)
T ss_dssp ---------TCCEEEEEECCCCCT
T ss_pred ---------CCCeEEEEECCchhh
Confidence 258999999999986
No 54
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.20 E-value=2.4e-11 Score=109.93 Aligned_cols=92 Identities=17% Similarity=0.243 Sum_probs=72.1
Q ss_pred HHHHHHHHHhcCC-CCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccC----CceEEEEccccccch
Q 015990 128 EINDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI----DQLKVLQEDFVKCHI 201 (397)
Q Consensus 128 ~i~~~i~~~~~~~-~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~----~~v~ii~gD~~~~~~ 201 (397)
.+.+.+++.+... ++.+|||+|||+|.++..++..+ .+|+|||+|+++++.|++++..+ ++++++++|+.+...
T Consensus 39 ~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~ 118 (201)
T 2ift_A 39 RVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK 118 (201)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH
Confidence 4455566655432 67899999999999999988876 48999999999999999998643 479999999987532
Q ss_pred hhhhhhHHhhhcCCCC-cceEeecCCCcC
Q 015990 202 RSHMLSLFERRKSSSG-FAKVVANIPFNI 229 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~-~d~Vv~NlPy~i 229 (397)
. ...+. +|+|++|+||..
T Consensus 119 ~----------~~~~~~fD~I~~~~~~~~ 137 (201)
T 2ift_A 119 Q----------PQNQPHFDVVFLDPPFHF 137 (201)
T ss_dssp S----------CCSSCCEEEEEECCCSSS
T ss_pred h----------hccCCCCCEEEECCCCCC
Confidence 1 01357 999999999874
No 55
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.20 E-value=4.4e-11 Score=113.31 Aligned_cols=90 Identities=21% Similarity=0.400 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIR 202 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~ 202 (397)
+.+++.+++.+. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... ++++++++|+.+..
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~-- 172 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-- 172 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG--
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc--
Confidence 345667777665 56789999999999999999975 679999999999999999998643 37999999997642
Q ss_pred hhhhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
..+.+|+|++|+||...
T Consensus 173 -----------~~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 173 -----------AGQQFAMIVSNPPYIDE 189 (276)
T ss_dssp -----------TTCCEEEEEECCCCBCT
T ss_pred -----------ccCCccEEEECCCCCCc
Confidence 12579999999999643
No 56
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.20 E-value=3e-11 Score=119.98 Aligned_cols=87 Identities=16% Similarity=0.221 Sum_probs=72.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC-----ceEEEEccccccchh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-----QLKVLQEDFVKCHIR 202 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~-----~v~ii~gD~~~~~~~ 202 (397)
.+.+++.+...++.+|||+|||+|.++..+++. +.+|+|||+|+.+++.+++++..++ +++++.+|+.+..
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~-- 288 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV-- 288 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--
Confidence 345777787777789999999999999999998 6799999999999999999987543 5889999998742
Q ss_pred hhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
..+.||+|++|+||+.
T Consensus 289 -----------~~~~fD~Ii~nppfh~ 304 (375)
T 4dcm_A 289 -----------EPFRFNAVLCNPPFHQ 304 (375)
T ss_dssp -----------CTTCEEEEEECCCC--
T ss_pred -----------CCCCeeEEEECCCccc
Confidence 2357999999999974
No 57
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.19 E-value=8.1e-11 Score=107.63 Aligned_cols=110 Identities=16% Similarity=0.260 Sum_probs=89.7
Q ss_pred cCCCHHHHHHHHHHhc--CCCCCEEEEEcCcccHHHHHHHHc-C--CcEEEEeCCHHHHHHHHHHhcc-------CCceE
Q 015990 123 YMLNSEINDQLAAAAA--VQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQHMVGLVRERFAS-------IDQLK 190 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~--~~~~~~VLEIG~G~G~lt~~La~~-~--~~V~~vE~d~~~i~~a~~~~~~-------~~~v~ 190 (397)
.+.++.+...+++.+. +.++++|||||||+|.++..+++. + .+|+++|+++.+++.+++++.. .++++
T Consensus 57 ~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 136 (226)
T 1i1n_A 57 TISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ 136 (226)
T ss_dssp EECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE
T ss_pred eecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE
Confidence 5677888889999886 778899999999999999999986 3 5999999999999999998764 34899
Q ss_pred EEEccccccchhhhhhhHHhhhcCCCCcceEeecCCC-cCcHHHHHHhccCCCce
Q 015990 191 VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPF-NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 191 ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy-~i~s~il~~L~~~g~~~ 244 (397)
++.+|+...... .+.+|+|+.+.+. ++...+...|.++|.++
T Consensus 137 ~~~~d~~~~~~~------------~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv 179 (226)
T 1i1n_A 137 LVVGDGRMGYAE------------EAPYDAIHVGAAAPVVPQALIDQLKPGGRLI 179 (226)
T ss_dssp EEESCGGGCCGG------------GCCEEEEEECSBBSSCCHHHHHTEEEEEEEE
T ss_pred EEECCcccCccc------------CCCcCEEEECCchHHHHHHHHHhcCCCcEEE
Confidence 999998765321 2579999988775 45677777777877553
No 58
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.19 E-value=2.5e-11 Score=114.65 Aligned_cols=91 Identities=20% Similarity=0.195 Sum_probs=71.4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~ 206 (397)
+..++.+++.+.+.++.+|||||||+|.++..|++++++|+|||+|+.|++.|+++.... ++.+|+.+.+....
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~-- 104 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIP-- 104 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCC--
T ss_pred HHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc----cceeeeeecccccc--
Confidence 457788899999999999999999999999999999999999999999999999998653 34455554432000
Q ss_pred hHHhhhcCCCCcceEeecCCCc
Q 015990 207 SLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
. ...+.||+|++|..++
T Consensus 105 ~-----~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 105 K-----ELAGHFDFVLNDRLIN 121 (261)
T ss_dssp G-----GGTTCCSEEEEESCGG
T ss_pred c-----ccCCCccEEEEhhhhH
Confidence 0 0135799999997664
No 59
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.19 E-value=1.4e-10 Score=111.05 Aligned_cols=103 Identities=14% Similarity=0.173 Sum_probs=82.8
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~ 203 (397)
..++.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ +++++.+|+.+++
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 135 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFD--- 135 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCC---
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcC---
Confidence 35567788888889999999999999999999998 8999999999999999999986543 7999999997761
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCcCc----------------HHHHHHhccCCCcee
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFNIS----------------TDVIKQLLPMGDIFS 245 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~i~----------------s~il~~L~~~g~~~~ 245 (397)
+.+|+|+++..++.. ..+.+.|+++|.++.
T Consensus 136 ------------~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 136 ------------EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp ------------CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred ------------CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 579999988665333 234455667776543
No 60
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.18 E-value=2e-11 Score=122.21 Aligned_cols=94 Identities=21% Similarity=0.299 Sum_probs=75.2
Q ss_pred CccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceE
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLK 190 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~ 190 (397)
..++..|| |.+++.+++.|++.+...++.+|||+|||+|.++..++++ +.+|+|+|+|+.+++.| .+++
T Consensus 13 ~~~~~~g~-~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------~~~~ 84 (421)
T 2ih2_A 13 SAPRSLGR-VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------PWAE 84 (421)
T ss_dssp ---------CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------TTEE
T ss_pred hhcccCce-EeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------CCCc
Confidence 44567788 8889999999999998766779999999999999999984 46999999999998776 4789
Q ss_pred EEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 191 VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 191 ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
++++|+.+... .+.+|+|++||||.
T Consensus 85 ~~~~D~~~~~~-------------~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 85 GILADFLLWEP-------------GEAFDLILGNPPYG 109 (421)
T ss_dssp EEESCGGGCCC-------------SSCEEEEEECCCCC
T ss_pred EEeCChhhcCc-------------cCCCCEEEECcCcc
Confidence 99999987642 25799999999995
No 61
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.18 E-value=5.5e-11 Score=110.78 Aligned_cols=107 Identities=22% Similarity=0.342 Sum_probs=88.4
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC--C-ceEEEEccccc
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI--D-QLKVLQEDFVK 198 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~--~-~v~ii~gD~~~ 198 (397)
..+.....++..+++.++++|||+|||+|.++..+++. +.+|+++|+++++++.|++++... + +++++++|+.+
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 77 VHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred ccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 45667778999999999999999999999999999998 679999999999999999998643 2 49999999986
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCc--CcHHHHHHhccCCCce
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN--ISTDVIKQLLPMGDIF 244 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~--i~s~il~~L~~~g~~~ 244 (397)
.. ....+|.|++|+|.. ....+.+.|.++|.++
T Consensus 157 ~~-------------~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~ 191 (255)
T 3mb5_A 157 GI-------------EEENVDHVILDLPQPERVVEHAAKALKPGGFFV 191 (255)
T ss_dssp CC-------------CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEE
T ss_pred cc-------------CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEE
Confidence 52 235699999999864 4556777777877654
No 62
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.18 E-value=8.5e-11 Score=106.67 Aligned_cols=100 Identities=27% Similarity=0.423 Sum_probs=79.3
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHH
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
...+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++. .+++++.+|+.+++.
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~d~~~~~~-------- 103 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP--KEFSITEGDFLSFEV-------- 103 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC--TTCCEESCCSSSCCC--------
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC--CceEEEeCChhhcCC--------
Confidence 3456666666688899999999999999999999999999999999999999875 579999999998754
Q ss_pred hhhcCCCCcceEeecCCCcC-cH--------HHHHHhccCCCce
Q 015990 210 ERRKSSSGFAKVVANIPFNI-ST--------DVIKQLLPMGDIF 244 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy~i-~s--------~il~~L~~~g~~~ 244 (397)
. +.+|+|+++..++. .. .+.+.|.++|.++
T Consensus 104 ----~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 142 (220)
T 3hnr_A 104 ----P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIV 142 (220)
T ss_dssp ----C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred ----C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEE
Confidence 2 67999998866542 22 3344566666554
No 63
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.17 E-value=3.2e-11 Score=125.24 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=82.4
Q ss_pred CccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-----------------CCcEEEEeCCHHHH
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-----------------GATVLAIEKDQHMV 176 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-----------------~~~V~~vE~d~~~i 176 (397)
..++..|| |.+++.+++.|++.+.+.++ +|||.+||+|.+...+++. ..+++|+|+|+.++
T Consensus 219 ~~~k~~G~-fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~ 296 (544)
T 3khk_A 219 AEGKQGGQ-YYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW 296 (544)
T ss_dssp TTTCCSTT-TCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH
T ss_pred hhCccCCe-EeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH
Confidence 34567889 88999999999999988766 9999999999998776532 34799999999999
Q ss_pred HHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 177 GLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 177 ~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
..|+.++..++ ++.+.++|.+..+.. ....||+||+||||..
T Consensus 297 ~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~-----------~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 297 KLAAMNMVIRGIDFNFGKKNADSFLDDQH-----------PDLRADFVMTNPPFNM 341 (544)
T ss_dssp HHHHHHHHHTTCCCBCCSSSCCTTTSCSC-----------TTCCEEEEEECCCSSC
T ss_pred HHHHHHHHHhCCCcccceeccchhcCccc-----------ccccccEEEECCCcCC
Confidence 99999875433 444488898765421 2357999999999975
No 64
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.17 E-value=5.5e-11 Score=111.97 Aligned_cols=93 Identities=23% Similarity=0.298 Sum_probs=70.8
Q ss_pred HHHHhcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhcc---CC---ceEEEEccccccchhhh
Q 015990 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFAS---ID---QLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~---~~---~v~ii~gD~~~~~~~~~ 204 (397)
+...+...++.+|||+|||+|.++..++++. .+|+|||+|+.+++.|++++.. ++ +++++++|+.+.....
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~- 106 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKAR- 106 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHH-
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhh-
Confidence 3445566778899999999999999999974 6999999999999999999876 43 6999999998873110
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
.......+.+|+|++|+||...
T Consensus 107 ----~~~~~~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 107 ----VEAGLPDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp ----HHTTCCTTCEEEEEECCCC---
T ss_pred ----hhhccCCCCcCEEEECCCCcCC
Confidence 0000023579999999999764
No 65
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.17 E-value=9.7e-11 Score=107.43 Aligned_cols=89 Identities=21% Similarity=0.402 Sum_probs=74.4
Q ss_pred HHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhh
Q 015990 128 EINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 128 ~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~ 204 (397)
...+.+++.+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++++++++|+.+.++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-- 107 (234)
T 3dtn_A 30 DFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-- 107 (234)
T ss_dssp HHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC--
T ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC--
Confidence 34456666665 457789999999999999999998 7799999999999999999987767999999999987642
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcC
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+.+|+|+++.+++.
T Consensus 108 -----------~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 108 -----------EKYDMVVSALSIHH 121 (234)
T ss_dssp -----------SCEEEEEEESCGGG
T ss_pred -----------CCceEEEEeCcccc
Confidence 57999998876543
No 66
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.16 E-value=7.2e-11 Score=116.89 Aligned_cols=116 Identities=14% Similarity=0.096 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccchhhh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~~~~ 204 (397)
+.+++.+++.+... +++|||+|||+|.++..+++.+.+|+|||+|+.+++.|++|+..++ +++++.+|+.++.....
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~ 278 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMN 278 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHS
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHh
Confidence 45666777777654 5789999999999999999988899999999999999999987654 89999999977531100
Q ss_pred ----hhhHHhhhcCCCCcceEeecCCCc-CcHHHHHHhccCCCc
Q 015990 205 ----MLSLFERRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDI 243 (397)
Q Consensus 205 ----~~~~~~~~~~~~~~d~Vv~NlPy~-i~s~il~~L~~~g~~ 243 (397)
+..+.........+|+|+.|+|+. ....++..+.+++.+
T Consensus 279 ~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~i 322 (369)
T 3bt7_A 279 GVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRI 322 (369)
T ss_dssp SCCCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEE
T ss_pred hccccccccccccccCCCCEEEECcCccccHHHHHHHHhCCCEE
Confidence 000000000002689999999985 556778877766544
No 67
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.16 E-value=7.6e-11 Score=106.25 Aligned_cols=90 Identities=19% Similarity=0.325 Sum_probs=75.7
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIR 202 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~ 202 (397)
+.+.+.+++.+...++ +|||+|||+|.++..+++. +.+|+|+|+++.+++.|++++... ++++++++|+.+.++.
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 4677888888887766 9999999999999999997 679999999999999999997653 3799999999987642
Q ss_pred hhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.+.+|+|+++..++.
T Consensus 109 ------------~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 109 ------------DNYADLIVSRGSVFF 123 (219)
T ss_dssp ------------TTCEEEEEEESCGGG
T ss_pred ------------cccccEEEECchHhh
Confidence 367999999876543
No 68
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.16 E-value=3.1e-11 Score=113.82 Aligned_cols=100 Identities=11% Similarity=0.059 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhh
Q 015990 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 126 ~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~ 205 (397)
++.+++.|.+... .+.+|||||||+|.++..|++.+.+|+|||+|+.|++.|++ .++++++++|+.++++.
T Consensus 26 p~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~----~~~v~~~~~~~e~~~~~--- 96 (257)
T 4hg2_A 26 PRALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR----HPRVTYAVAPAEDTGLP--- 96 (257)
T ss_dssp CHHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC----CTTEEEEECCTTCCCCC---
T ss_pred HHHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh----cCCceeehhhhhhhccc---
Confidence 4677777777654 45689999999999999999999999999999999987754 36899999999998763
Q ss_pred hhHHhhhcCCCCcceEeecCCCcCcH------HHHHHhccCCCc
Q 015990 206 LSLFERRKSSSGFAKVVANIPFNIST------DVIKQLLPMGDI 243 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~i~s------~il~~L~~~g~~ 243 (397)
.+.+|+|+++..+++.. ++.+.|+++|.+
T Consensus 97 ---------~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l 131 (257)
T 4hg2_A 97 ---------PASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVF 131 (257)
T ss_dssp ---------SSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEE
T ss_pred ---------CCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEE
Confidence 36899999987776543 455667777755
No 69
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.16 E-value=6.6e-11 Score=115.64 Aligned_cols=94 Identities=20% Similarity=0.173 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC----ceEEEEccccccc
Q 015990 126 NSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID----QLKVLQEDFVKCH 200 (397)
Q Consensus 126 ~~~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~----~v~ii~gD~~~~~ 200 (397)
.....+.+.+.+. ..++.+|||+|||+|.++..+++.+++|++||+|+.+++.|++++..++ +++++++|+.++.
T Consensus 137 q~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 137 QIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp GHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 3444455666654 4567899999999999999999998899999999999999999986443 4999999998763
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
.. ... ....||+|++|+|+
T Consensus 217 ~~-----~~~---~~~~fD~Ii~dPP~ 235 (332)
T 2igt_A 217 QR-----EER---RGSTYDIILTDPPK 235 (332)
T ss_dssp HH-----HHH---HTCCBSEEEECCCS
T ss_pred HH-----HHh---cCCCceEEEECCcc
Confidence 21 000 13579999999996
No 70
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.16 E-value=2.6e-10 Score=106.25 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=64.2
Q ss_pred CCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcC-
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKS- 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~- 214 (397)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++ +++++++|+.+..... + . ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~----~--~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDA-L----K--EES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTT-S----T--TCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhh-h----h--ccc
Confidence 4679999999999999999876 6899999999999999999986543 5999999987621100 0 0 00
Q ss_pred CCCcceEeecCCCcCcH
Q 015990 215 SSGFAKVVANIPFNIST 231 (397)
Q Consensus 215 ~~~~d~Vv~NlPy~i~s 231 (397)
...+|+|++|+||....
T Consensus 138 ~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp SCCBSEEEECCCCC---
T ss_pred CCcccEEEECCCCccCc
Confidence 14799999999997543
No 71
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.15 E-value=4.8e-11 Score=113.57 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=80.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~ 203 (397)
.....+.+. +.++++|||+|||+|.++..+++.++ +|+|+|+|+.+++.|++++..++ +++++++|+.++..
T Consensus 114 ~~~~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-- 189 (278)
T 2frn_A 114 KERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-- 189 (278)
T ss_dssp HHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--
T ss_pred HHHHHHHHh--CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--
Confidence 444445544 35688999999999999999999877 59999999999999999987543 59999999988753
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCcC---cHHHHHHhccCCCce
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFNI---STDVIKQLLPMGDIF 244 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~i---~s~il~~L~~~g~~~ 244 (397)
...+|+|++|+|+.. ...+.+.|.++|.++
T Consensus 190 -----------~~~fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~ 222 (278)
T 2frn_A 190 -----------ENIADRILMGYVVRTHEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp -----------CSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEE
T ss_pred -----------cCCccEEEECCchhHHHHHHHHHHHCCCCeEEE
Confidence 257999999999753 334566677776554
No 72
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.15 E-value=7.5e-11 Score=108.60 Aligned_cols=107 Identities=11% Similarity=0.115 Sum_probs=79.4
Q ss_pred HHHHH---HHHhcCCCCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhh
Q 015990 129 INDQL---AAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 129 i~~~i---~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~ 203 (397)
+...+ ++.+.+.++.+|||+|||+|.++..+++. + .+|+|+|+++++++.|+++....++++++.+|+.+.....
T Consensus 59 ~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~ 138 (230)
T 1fbn_A 59 LAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYA 138 (230)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGT
T ss_pred HHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccccc
Confidence 33555 44456678899999999999999999997 3 7999999999999999999876679999999998721100
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCc-----CcHHHHHHhccCCCce
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFN-----ISTDVIKQLLPMGDIF 244 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~-----i~s~il~~L~~~g~~~ 244 (397)
...+.+|+|+.++|.. +...+.+.|.++|.++
T Consensus 139 ---------~~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 175 (230)
T 1fbn_A 139 ---------NIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGM 175 (230)
T ss_dssp ---------TTSCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred ---------ccCccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEE
Confidence 0125789999887643 1334455666776543
No 73
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.15 E-value=1.2e-10 Score=111.61 Aligned_cols=103 Identities=19% Similarity=0.247 Sum_probs=78.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHH-HHH-cCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNV-LLN-AGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~-La~-~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~ 203 (397)
.+++.-...+.+.++++|||||||+|.+|.. +++ .+++|+|||+|+++++.|+++++.. ++++++++|+.+++
T Consensus 109 ~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--- 185 (298)
T 3fpf_A 109 ELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--- 185 (298)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---
T ss_pred HHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC---
Confidence 3445555678899999999999999987754 555 3889999999999999999987542 58999999998863
Q ss_pred hhhhHHhhhcCCCCcceEeecCCC----cCcHHHHHHhccCCCce
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPF----NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy----~i~s~il~~L~~~g~~~ 244 (397)
.+.||+|+.+.-- .+...+.+.|.++|.++
T Consensus 186 -----------d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 186 -----------GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp -----------GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred -----------CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 1578988765321 23445667778888664
No 74
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.15 E-value=8.2e-11 Score=110.40 Aligned_cols=126 Identities=18% Similarity=0.275 Sum_probs=84.2
Q ss_pred ccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEE
Q 015990 115 PRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQ 193 (397)
Q Consensus 115 ~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~ 193 (397)
|...||.+........-..+... +.++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++..++ ++++++
T Consensus 95 p~~~fgtg~~~tt~~~~~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~ 173 (254)
T 2nxc_A 95 PGMAFGTGHHETTRLALKALARH-LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLE 173 (254)
T ss_dssp CC-----CCSHHHHHHHHHHHHH-CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEE
T ss_pred CCccccCCCCHHHHHHHHHHHHh-cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEE
Confidence 33344443332222333333333 5678899999999999999999998899999999999999999987554 388999
Q ss_pred ccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHH----HHHhccCCCceeeeEEeeeHH
Q 015990 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDV----IKQLLPMGDIFSEVVLLLQEE 254 (397)
Q Consensus 194 gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~i----l~~L~~~g~~~~~~~lm~Qke 254 (397)
+|+.+. + ..+.+|+|++|++.+....+ ...|.++|.++......-+.+
T Consensus 174 ~d~~~~-~------------~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~~~~~ 225 (254)
T 2nxc_A 174 GSLEAA-L------------PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAP 225 (254)
T ss_dssp SCHHHH-G------------GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEGGGHH
T ss_pred CChhhc-C------------cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeeccCCHH
Confidence 998763 1 12579999999887654433 345566776654433333433
No 75
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.15 E-value=2e-10 Score=106.70 Aligned_cols=91 Identities=13% Similarity=0.214 Sum_probs=77.4
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEcccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKC 199 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~ 199 (397)
...+..++.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|++++... ++++++++|+.+.
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 345678889999999999999999999999999999987 779999999999999999987643 3799999999887
Q ss_pred chhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 200 HIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
++ .+.||+|+++-..
T Consensus 99 ~~-------------~~~fD~V~~~~~~ 113 (256)
T 1nkv_A 99 VA-------------NEKCDVAACVGAT 113 (256)
T ss_dssp CC-------------SSCEEEEEEESCG
T ss_pred Cc-------------CCCCCEEEECCCh
Confidence 53 2578999876443
No 76
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.15 E-value=1.6e-10 Score=106.65 Aligned_cols=101 Identities=13% Similarity=0.235 Sum_probs=81.6
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHH--cCCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLN--AGATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVK 198 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~--~~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~ 198 (397)
.+.+.....+...+...++.+|||||||+|..+..+++ .+.+|+++|+|+.+++.|++++...+ +++++.+|+.+
T Consensus 54 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 54 IVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 35677888888777777889999999999999999999 46799999999999999999986543 89999999987
Q ss_pred cch-hhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHH
Q 015990 199 CHI-RSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK 235 (397)
Q Consensus 199 ~~~-~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~ 235 (397)
... . ..+.||+|+.+.+......++.
T Consensus 134 ~~~~~-----------~~~~fD~V~~~~~~~~~~~~l~ 160 (232)
T 3ntv_A 134 QFENV-----------NDKVYDMIFIDAAKAQSKKFFE 160 (232)
T ss_dssp CHHHH-----------TTSCEEEEEEETTSSSHHHHHH
T ss_pred HHHhh-----------ccCCccEEEEcCcHHHHHHHHH
Confidence 632 1 1267999999987655554443
No 77
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.15 E-value=3.2e-10 Score=99.82 Aligned_cols=108 Identities=18% Similarity=0.255 Sum_probs=86.2
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCH 200 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~ 200 (397)
...+.+...+++.+.+.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.+++++... ++++++++|+.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 94 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA- 94 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-
Confidence 566788888999999999999999999999999999998899999999999999999987644 4899999998762
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHH----HhccCCCc
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK----QLLPMGDI 243 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~----~L~~~g~~ 243 (397)
+. ..+.+|+|+++.++.....++. .|.++|.+
T Consensus 95 ~~-----------~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l 130 (192)
T 1l3i_A 95 LC-----------KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRI 130 (192)
T ss_dssp HT-----------TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEE
T ss_pred cc-----------cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEE
Confidence 21 1147899999988655555443 34455544
No 78
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=7.7e-11 Score=110.55 Aligned_cols=92 Identities=18% Similarity=0.237 Sum_probs=78.4
Q ss_pred CCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEcccccc
Q 015990 120 GQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKC 199 (397)
Q Consensus 120 GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~ 199 (397)
.+.....+.+.+.+++.+...++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++. +++++++|+.++
T Consensus 13 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~d~~~~ 88 (261)
T 3ege_A 13 SQTRVPDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP----QVEWFTGYAENL 88 (261)
T ss_dssp CCSBCCCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT----TEEEECCCTTSC
T ss_pred hhcccccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc----CCEEEECchhhC
Confidence 3444566789999999998888999999999999999999999999999999999998876653 899999999887
Q ss_pred chhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 200 HIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
++. .+.+|+|+++..+
T Consensus 89 ~~~------------~~~fD~v~~~~~l 104 (261)
T 3ege_A 89 ALP------------DKSVDGVISILAI 104 (261)
T ss_dssp CSC------------TTCBSEEEEESCG
T ss_pred CCC------------CCCEeEEEEcchH
Confidence 642 3679999988765
No 79
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.15 E-value=7.5e-11 Score=108.88 Aligned_cols=84 Identities=20% Similarity=0.225 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccC-CceEEEEcccccc--chh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKC--HIR 202 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~--~~~ 202 (397)
..+...+...+ ..++.+|||||||+|.++..+++.+. +|+|+|+++.|++.|+++.... .+++++++|+.+. ++
T Consensus 47 ~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~- 124 (236)
T 1zx0_A 47 TPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTL- 124 (236)
T ss_dssp HHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGS-
T ss_pred HHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhccc-
Confidence 44555555544 46778999999999999999988654 8999999999999999988654 3899999999876 33
Q ss_pred hhhhhHHhhhcCCCCcceEee
Q 015990 203 SHMLSLFERRKSSSGFAKVVA 223 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~ 223 (397)
..+.||+|++
T Consensus 125 -----------~~~~fD~V~~ 134 (236)
T 1zx0_A 125 -----------PDGHFDGILY 134 (236)
T ss_dssp -----------CTTCEEEEEE
T ss_pred -----------CCCceEEEEE
Confidence 2357999998
No 80
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.14 E-value=1.6e-10 Score=106.85 Aligned_cols=105 Identities=14% Similarity=0.196 Sum_probs=83.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~ 205 (397)
.....+++.+++.++.+|||||||+|.++..+++.+.+|+|+|+++.+++.+++++... ++++++.+|+.++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--- 84 (239)
T 1xxl_A 8 HSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFP--- 84 (239)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSC---
T ss_pred CCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCC---
Confidence 45567888899999999999999999999999999889999999999999999987543 4799999999887642
Q ss_pred hhHHhhhcCCCCcceEeecCCCc-Cc------HHHHHHhccCCCce
Q 015990 206 LSLFERRKSSSGFAKVVANIPFN-IS------TDVIKQLLPMGDIF 244 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~-i~------s~il~~L~~~g~~~ 244 (397)
.+.+|+|+++...+ +. ..+.+.|.++|.++
T Consensus 85 ---------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 121 (239)
T 1xxl_A 85 ---------DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFL 121 (239)
T ss_dssp ---------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred ---------CCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEE
Confidence 35799999885543 22 23445566666553
No 81
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.14 E-value=1.9e-10 Score=106.99 Aligned_cols=109 Identities=16% Similarity=0.204 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEcccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFV 197 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~ 197 (397)
...+..+..+++.+.+.++++|||+|||+|.++..+++. +.+|+++|+++.+++.|++++... ++++++++|+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~ 158 (258)
T 2pwy_A 79 PTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLE 158 (258)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGG
T ss_pred cccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchh
Confidence 444666678899999999999999999999999999997 579999999999999999987543 58999999998
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCC--cCcHHHHHHhccCCCce
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPF--NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy--~i~s~il~~L~~~g~~~ 244 (397)
+.++. .+.+|+|+.|+|. .+...+...|.++|.++
T Consensus 159 ~~~~~------------~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~ 195 (258)
T 2pwy_A 159 EAELE------------EAAYDGVALDLMEPWKVLEKAALALKPDRFLV 195 (258)
T ss_dssp GCCCC------------TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEE
T ss_pred hcCCC------------CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEE
Confidence 77432 2579999999875 34456666777777654
No 82
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.14 E-value=1.1e-10 Score=116.68 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=80.3
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC---------------------------------------
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA--------------------------------------- 164 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--------------------------------------- 164 (397)
.+.+.++..|+..+...++..|||++||+|++++.++..+.
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 35688999999999999999999999999999988887533
Q ss_pred -cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 165 -TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 165 -~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+|+|+|+|+.+++.|++|+...+ +++++++|+.+.+. ...+|+|++||||..
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------------~~~fD~Iv~NPPYg~ 319 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------------EDEYGVVVANPPYGE 319 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------------CCCSCEEEECCCCCC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------------CCCCCEEEECCCCcc
Confidence 49999999999999999987543 59999999998753 247999999999964
No 83
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=1.6e-10 Score=109.17 Aligned_cols=109 Identities=20% Similarity=0.339 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC-----CceEEEEcc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI-----DQLKVLQED 195 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~-----~~v~ii~gD 195 (397)
.+.+..+..++..+.+.++++|||+|||+|.++..+++. +.+|+++|+++.+++.|++++... ++++++++|
T Consensus 82 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 82 VIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred eecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 456778889999999999999999999999999999986 579999999999999999987543 489999999
Q ss_pred ccccchhhhhhhHHhhhcCCCCcceEeecCCC--cCcHHHHHHhccCCCce
Q 015990 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPF--NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy--~i~s~il~~L~~~g~~~ 244 (397)
+.+.++. .+.+|+|++|+|. .+...+...|.++|.++
T Consensus 162 ~~~~~~~------------~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~ 200 (280)
T 1i9g_A 162 LADSELP------------DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLM 200 (280)
T ss_dssp GGGCCCC------------TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEE
T ss_pred hHhcCCC------------CCceeEEEECCcCHHHHHHHHHHhCCCCCEEE
Confidence 9887532 2579999999874 44556667777777654
No 84
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.13 E-value=2.2e-10 Score=104.12 Aligned_cols=91 Identities=18% Similarity=0.287 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC-------ceEEEEcc
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-------QLKVLQED 195 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~-------~v~ii~gD 195 (397)
..+...+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|++++...+ +++++.+|
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred chHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 345566777777776778899999999999999999976 699999999999999999976432 79999999
Q ss_pred ccccchhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
+...+.. .+.+|+|+++-.+
T Consensus 93 ~~~~~~~------------~~~fD~V~~~~~l 112 (219)
T 3jwg_A 93 LVYRDKR------------FSGYDAATVIEVI 112 (219)
T ss_dssp SSSCCGG------------GTTCSEEEEESCG
T ss_pred ccccccc------------cCCCCEEEEHHHH
Confidence 9665532 2579999887554
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.13 E-value=1.2e-10 Score=105.85 Aligned_cols=78 Identities=13% Similarity=0.255 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.++.+|||||||+|.++..+++. +.+|+|||+++.+++.|++++... ++++++++|+.+++.. + ..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~--------~~ 109 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY--F--------ED 109 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT--S--------CT
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh--c--------CC
Confidence 45789999999999999999987 569999999999999999987543 4899999999875410 0 23
Q ss_pred CCcceEeecCCC
Q 015990 216 SGFAKVVANIPF 227 (397)
Q Consensus 216 ~~~d~Vv~NlPy 227 (397)
+.+|.|++|.|.
T Consensus 110 ~~~D~i~~~~~~ 121 (214)
T 1yzh_A 110 GEIDRLYLNFSD 121 (214)
T ss_dssp TCCSEEEEESCC
T ss_pred CCCCEEEEECCC
Confidence 579999999885
No 86
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.13 E-value=1.4e-10 Score=107.68 Aligned_cols=92 Identities=12% Similarity=0.159 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHh-cCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccc
Q 015990 126 NSEINDQLAAAA-AVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCH 200 (397)
Q Consensus 126 ~~~i~~~i~~~~-~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~ 200 (397)
.+.....+++.+ .+.++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|++++...+ +++++++|+.+++
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 30 SPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp CHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 356677777776 567788999999999999999999854 99999999999999999886543 5999999998876
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+. .+.+|+|+++..++.
T Consensus 110 ~~------------~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 110 FQ------------NEELDLIWSEGAIYN 126 (257)
T ss_dssp SC------------TTCEEEEEEESCSCC
T ss_pred CC------------CCCEEEEEecChHhh
Confidence 42 367999998866544
No 87
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=1.4e-10 Score=115.41 Aligned_cols=93 Identities=12% Similarity=0.161 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC---------------------------------------
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA--------------------------------------- 164 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--------------------------------------- 164 (397)
.+.+.++..|+......++..|||.+||+|++.+.++..+.
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 35688999999999999999999999999999998887533
Q ss_pred -cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 165 -TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 165 -~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+|+|+|+|+.+++.|++|+...+ +++++++|+.+++. ...+|+||+||||..
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------------~~~fD~Iv~NPPYG~ 312 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-------------NKINGVLISNPPYGE 312 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-------------CCCSCEEEECCCCTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-------------cCCcCEEEECCchhh
Confidence 49999999999999999987654 69999999998753 247899999999963
No 88
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.13 E-value=1.5e-10 Score=104.11 Aligned_cols=91 Identities=22% Similarity=0.252 Sum_probs=72.6
Q ss_pred HHHHHHhc--CCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccchhhhh
Q 015990 131 DQLAAAAA--VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 131 ~~i~~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~~~~~ 205 (397)
..+++.+. +.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++...+ +++++.+|+.+..
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----- 122 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV----- 122 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-----
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-----
Confidence 34444443 56788999999999999999998865 99999999999999999986543 5999999997752
Q ss_pred hhHHhhhcCCCCcceEeecCCCcCcHHHHH
Q 015990 206 LSLFERRKSSSGFAKVVANIPFNISTDVIK 235 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~ 235 (397)
.+.+|+|++|.|++....++.
T Consensus 123 ---------~~~fD~i~~~~~~~~~~~~l~ 143 (205)
T 3grz_A 123 ---------DGKFDLIVANILAEILLDLIP 143 (205)
T ss_dssp ---------CSCEEEEEEESCHHHHHHHGG
T ss_pred ---------CCCceEEEECCcHHHHHHHHH
Confidence 267999999999865444433
No 89
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.12 E-value=1e-10 Score=110.94 Aligned_cols=84 Identities=18% Similarity=0.266 Sum_probs=70.9
Q ss_pred HHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhhhhHHhh
Q 015990 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+ +++++.+|+.+.+.
T Consensus 112 ~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---------- 181 (286)
T 3m70_A 112 VVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI---------- 181 (286)
T ss_dssp HHHHHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC----------
T ss_pred HHHHhhccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc----------
Confidence 3344444478899999999999999999999999999999999999999987655 89999999988753
Q ss_pred hcCCCCcceEeecCCCcC
Q 015990 212 RKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i 229 (397)
.+.+|+|+++.+++.
T Consensus 182 ---~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 182 ---QENYDFIVSTVVFMF 196 (286)
T ss_dssp ---CSCEEEEEECSSGGG
T ss_pred ---cCCccEEEEccchhh
Confidence 267999999987653
No 90
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.12 E-value=1.9e-10 Score=106.78 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=79.1
Q ss_pred HhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh
Q 015990 136 AAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 136 ~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
.+.+++|++|||+|||+|+++..+++. .++|+|+|++++|++.++++....+|+..+.+|+.......
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~--------- 142 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYR--------- 142 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGT---------
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccc---------
Confidence 356899999999999999999999986 35899999999999999999887789999999987653211
Q ss_pred cCCCCcceEeecCCCcCcH-----HHHHHhccCCCce
Q 015990 213 KSSSGFAKVVANIPFNIST-----DVIKQLLPMGDIF 244 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~i~s-----~il~~L~~~g~~~ 244 (397)
...+.+|+|+.++++.... .+.+.|+++|.++
T Consensus 143 ~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lv 179 (233)
T 4df3_A 143 HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYML 179 (233)
T ss_dssp TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEE
T ss_pred cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEE
Confidence 1235789999998876533 3344577777653
No 91
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.12 E-value=1.1e-10 Score=116.27 Aligned_cols=92 Identities=13% Similarity=0.229 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC----------------------------------------C
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG----------------------------------------A 164 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~----------------------------------------~ 164 (397)
+.+.++..|+..+...++..|||+|||+|+++..++..+ .
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 457889999999999899999999999999999888753 4
Q ss_pred cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 165 TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 165 ~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+|+|+|+|+.+++.|++++..++ ++++.++|+.++.. ...+|+||+||||..
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------------~~~~D~Iv~NPPyg~ 313 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-------------EDEFGFIITNPPYGE 313 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-------------SCBSCEEEECCCCCC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-------------CCCCcEEEECCCCcC
Confidence 69999999999999999986543 79999999998753 257899999999963
No 92
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.11 E-value=6.8e-11 Score=110.20 Aligned_cols=95 Identities=20% Similarity=0.182 Sum_probs=69.9
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc----CCcEEEEeCCHHHHHHHHHHhccC---C---c---------
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA----GATVLAIEKDQHMVGLVRERFASI---D---Q--------- 188 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~----~~~V~~vE~d~~~i~~a~~~~~~~---~---~--------- 188 (397)
.+++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... + +
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 34455555554446779999999999999999986 568999999999999999887654 2 2
Q ss_pred ----------------eE-------------EEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 189 ----------------LK-------------VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 189 ----------------v~-------------ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
++ ++++|+.+...... . .....+|+|++|+||..
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~----~---~~~~~fD~Iv~npp~~~ 180 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSA----V---LAGSAPDVVLTDLPYGE 180 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHH----H---HTTCCCSEEEEECCGGG
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeeccccccccccc----c---cCCCCceEEEeCCCeec
Confidence 66 99999877421000 0 01237999999999853
No 93
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.11 E-value=1.7e-10 Score=111.12 Aligned_cols=86 Identities=10% Similarity=0.125 Sum_probs=72.6
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhh
Q 015990 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 130 ~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~ 204 (397)
.+.+++.+. +.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|++++...+ +++++.+|+.+.++.
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-- 182 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD-- 182 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC--
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC--
Confidence 345667776 788899999999999999999998 8999999999999999999876543 799999999987642
Q ss_pred hhhHHhhhcCCCCcceEeecCCC
Q 015990 205 MLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
.+.+|+|+++-.+
T Consensus 183 ----------~~~fD~V~~~~~l 195 (312)
T 3vc1_A 183 ----------KGAVTASWNNEST 195 (312)
T ss_dssp ----------TTCEEEEEEESCG
T ss_pred ----------CCCEeEEEECCch
Confidence 3679999987554
No 94
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.11 E-value=9.3e-11 Score=111.70 Aligned_cols=95 Identities=16% Similarity=0.176 Sum_probs=75.8
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~ 207 (397)
++.+. +++|++|||+|||+|.++..+++.| ++|+|+|+|+.+++.+++|++.++ +++++++|+.++..
T Consensus 118 ri~~~--~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~------ 189 (278)
T 3k6r_A 118 RMAKV--AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------ 189 (278)
T ss_dssp HHHHH--CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC------
T ss_pred HHHHh--cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc------
Confidence 44443 4678999999999999999999987 589999999999999999987654 79999999988743
Q ss_pred HHhhhcCCCCcceEeecCCCcCc---HHHHHHhccCC
Q 015990 208 LFERRKSSSGFAKVVANIPFNIS---TDVIKQLLPMG 241 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~i~---s~il~~L~~~g 241 (397)
.+.+|.|+.|+|+... ...+..+.++|
T Consensus 190 -------~~~~D~Vi~~~p~~~~~~l~~a~~~lk~gG 219 (278)
T 3k6r_A 190 -------ENIADRILMGYVVRTHEFIPKALSIAKDGA 219 (278)
T ss_dssp -------CSCEEEEEECCCSSGGGGHHHHHHHEEEEE
T ss_pred -------ccCCCEEEECCCCcHHHHHHHHHHHcCCCC
Confidence 3579999999997543 23444555555
No 95
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.11 E-value=2.2e-10 Score=106.33 Aligned_cols=108 Identities=15% Similarity=0.143 Sum_probs=78.8
Q ss_pred HHHHHHHHHhc---CCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccch
Q 015990 128 EINDQLAAAAA---VQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHI 201 (397)
Q Consensus 128 ~i~~~i~~~~~---~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~ 201 (397)
.+...+++.++ ++++++|||+|||+|+.|..+++. .++|+|+|+++.+++.+.+......|+.++.+|+.....
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~ 139 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQS 139 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGG
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchh
Confidence 45566666655 889999999999999999999986 359999999999876555444434689999999986532
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCCcCcHHHH----H-HhccCCCce
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPFNISTDVI----K-QLLPMGDIF 244 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il----~-~L~~~g~~~ 244 (397)
... ..+.+|+|++|.+......++ . .|+++|.++
T Consensus 140 ~~~---------~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 140 YKS---------VVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDML 178 (232)
T ss_dssp TTT---------TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEE
T ss_pred hhc---------cccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEE
Confidence 110 125799999998874444433 2 466776654
No 96
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.11 E-value=2.5e-10 Score=106.05 Aligned_cols=100 Identities=18% Similarity=0.229 Sum_probs=78.7
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHH
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
..+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++.. ..+++++.+|+.++++.
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~------- 105 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-SPVVCYEQKAIEDIAIE------- 105 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-CTTEEEEECCGGGCCCC-------
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-cCCeEEEEcchhhCCCC-------
Confidence 4455666666889999999999999999999977 99999999999999999876 46899999999887642
Q ss_pred hhhcCCCCcceEeecCCCcCcH-------HHHHHhccCCCc
Q 015990 210 ERRKSSSGFAKVVANIPFNIST-------DVIKQLLPMGDI 243 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy~i~s-------~il~~L~~~g~~ 243 (397)
.+.+|+|+++..++... .+.+.|.++|.+
T Consensus 106 -----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 141 (253)
T 3g5l_A 106 -----PDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSF 141 (253)
T ss_dssp -----TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEE
T ss_pred -----CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEE
Confidence 36799999887654332 344455666654
No 97
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.10 E-value=2e-10 Score=103.23 Aligned_cols=76 Identities=22% Similarity=0.327 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....++++++.+|+.+.++ ..+.+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~------------~~~~f 108 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDF------------PSASF 108 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCS------------CSSCE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCC------------CCCcc
Confidence 6778999999999999999999876 8999999999999999998765689999999988754 23579
Q ss_pred ceEeecCCC
Q 015990 219 AKVVANIPF 227 (397)
Q Consensus 219 d~Vv~NlPy 227 (397)
|+|+++.++
T Consensus 109 D~v~~~~~~ 117 (215)
T 2pxx_A 109 DVVLEKGTL 117 (215)
T ss_dssp EEEEEESHH
T ss_pred cEEEECcch
Confidence 999998775
No 98
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.10 E-value=1.5e-10 Score=104.92 Aligned_cols=102 Identities=19% Similarity=0.309 Sum_probs=80.4
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC---CcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~ 204 (397)
.+.+++.+.+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.+++++... ++++++.+|+.+.++.
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~-- 103 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP-- 103 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC--
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC--
Confidence 3567778888889999999999999999999875 69999999999999999987543 3799999999887642
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCc
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDI 243 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~ 243 (397)
.+.+|+|+++..++.. ..+.+.|.++|.+
T Consensus 104 ----------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 139 (219)
T 3dh0_A 104 ----------DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYL 139 (219)
T ss_dssp ----------SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEE
T ss_pred ----------CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEE
Confidence 3579999988665432 2344455566544
No 99
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.10 E-value=1.7e-10 Score=105.24 Aligned_cols=99 Identities=15% Similarity=0.106 Sum_probs=72.4
Q ss_pred hcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcC
Q 015990 137 AAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 137 ~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
+.+.++++|||+|||+|.++..+++.. ++|+|+|+|+.|++.+.+.....+|+.++.+|+........ .
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~---------~ 123 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSG---------I 123 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTT---------T
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcc---------c
Confidence 356788999999999999999999874 68999999999887666655444689999999876421000 1
Q ss_pred CCCcceEeecCCCcCc-----HHHHHHhccCCCce
Q 015990 215 SSGFAKVVANIPFNIS-----TDVIKQLLPMGDIF 244 (397)
Q Consensus 215 ~~~~d~Vv~NlPy~i~-----s~il~~L~~~g~~~ 244 (397)
.+.+|.|++|++.... ..+.+.|+++|.++
T Consensus 124 ~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~ 158 (210)
T 1nt2_A 124 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVV 158 (210)
T ss_dssp CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred ccceeEEEEeccChhHHHHHHHHHHHHhCCCCEEE
Confidence 2579999999765432 23455677777654
No 100
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.10 E-value=3.8e-10 Score=107.45 Aligned_cols=106 Identities=16% Similarity=0.231 Sum_probs=82.9
Q ss_pred HHHHHHHHHHh----cCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccc
Q 015990 127 SEINDQLAAAA----AVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVK 198 (397)
Q Consensus 127 ~~i~~~i~~~~----~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~ 198 (397)
....+.+++.+ .+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++.... ++++++.+|+.+
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 143 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE 143 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc
Confidence 44567788888 7788999999999999999999987 889999999999999999887532 479999999998
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCC-cCc------HHHHHHhccCCCce
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPF-NIS------TDVIKQLLPMGDIF 244 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy-~i~------s~il~~L~~~g~~~ 244 (397)
.++. .+.+|+|+++-.+ ++. ..+.+.|+++|.++
T Consensus 144 ~~~~------------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 184 (297)
T 2o57_A 144 IPCE------------DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMA 184 (297)
T ss_dssp CSSC------------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred CCCC------------CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEE
Confidence 7642 3579999887553 322 23445566666554
No 101
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.10 E-value=5.6e-10 Score=115.66 Aligned_cols=173 Identities=14% Similarity=0.162 Sum_probs=115.7
Q ss_pred cCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---------------CCcEEEEeCCHHHHHHHHHH
Q 015990 118 SLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---------------GATVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 118 ~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---------------~~~V~~vE~d~~~i~~a~~~ 182 (397)
..|| |.+++.+++.|++.+.+.++++|+|..||+|.+.....+. ...++|+|+|+.++..|+.+
T Consensus 195 ~~Gq-fyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 195 DSGE-FYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp SCCC-CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred cCce-ECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 5699 8899999999999999999999999999999997766542 24699999999999999987
Q ss_pred hccC--CceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCc--HH---------------------HHHHh
Q 015990 183 FASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS--TD---------------------VIKQL 237 (397)
Q Consensus 183 ~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~--s~---------------------il~~L 237 (397)
+--+ +...+.++|.+..+..+.. ...+||+|++||||... .+ ++..|
T Consensus 274 l~lhg~~~~~I~~~dtL~~~~~~~~--------~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~L 345 (530)
T 3ufb_A 274 LLLHGLEYPRIDPENSLRFPLREMG--------DKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKL 345 (530)
T ss_dssp HHHHTCSCCEEECSCTTCSCGGGCC--------GGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHB
T ss_pred HHhcCCccccccccccccCchhhhc--------ccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHh
Confidence 6432 3567889999876543211 22579999999999632 11 12223
Q ss_pred cc-------CCCceeeeEEeeeHHHHHHHccCCCCCCCccceeeeeecccCCeEeeeeCCCCccCCCCCceEEEEEEecc
Q 015990 238 LP-------MGDIFSEVVLLLQEETALRLVEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQ 310 (397)
Q Consensus 238 ~~-------~g~~~~~~~lm~Qkeva~rl~~a~pg~k~y~~lsv~~q~~~~~~~~~~v~~~~F~P~P~VdSavv~l~~~~ 310 (397)
+. +|. +.+++...+..+ .+ ..+.+.-.+---+.+..+..+|.+.|+|.-.|..+|+-+++.+
T Consensus 346 k~~~~~l~~gGr----~avVlP~g~Lf~-----~~--~~~~iRk~Lle~~~l~aII~LP~~~F~~~tgi~t~Il~~~K~~ 414 (530)
T 3ufb_A 346 KRPGHGSDNGGR----AAVVVPNGTLFS-----DG--ISARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRSG 414 (530)
T ss_dssp CCTTSSSSSCCE----EEEEEEHHHHHC-----CT--HHHHHHHHHHHHSEEEEEEECCTTTTTTTCCCCEEEEEEESSS
T ss_pred hhhhhccCCCce----EEEEecchhhhc-----cc--hHHHHHHHHhhcCEEEEEEECCcccCcCCCCCcEEEEEEECCC
Confidence 22 221 233333333210 00 0000000000013456778899999999888999999998654
No 102
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.10 E-value=5.9e-10 Score=102.96 Aligned_cols=109 Identities=17% Similarity=0.255 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCH 200 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~ 200 (397)
+..+.....++..+.+.++++|||+|||+|.++..+++.+.+|+++|+++++++.|+++.... ++++++.+|+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 74 IIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred cccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 455677778999999999999999999999999999998889999999999999999987543 47999999998753
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCC--cCcHHHHHHhccCCCce
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPF--NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy--~i~s~il~~L~~~g~~~ 244 (397)
. ....+|+|+.|+|. .....+...|.++|.++
T Consensus 154 ~------------~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~ 187 (248)
T 2yvl_A 154 V------------PEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVG 187 (248)
T ss_dssp C------------CTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEE
T ss_pred c------------CCCcccEEEECCcCHHHHHHHHHHHcCCCCEEE
Confidence 1 12479999999874 34455666777777553
No 103
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.09 E-value=2e-10 Score=108.81 Aligned_cols=104 Identities=19% Similarity=0.326 Sum_probs=79.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccch
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHI 201 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~ 201 (397)
.....+++.+.+.++++|||+|||+|.++..+++. +.+|+++|+++.+++.|++++... ++++++.+|+.+. +
T Consensus 97 ~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~ 175 (275)
T 1yb2_A 97 IDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF-I 175 (275)
T ss_dssp ---------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-C
T ss_pred hhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc-C
Confidence 34457778888889999999999999999999987 679999999999999999998765 4899999999873 2
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCC--cCcHHHHHHhccCCCce
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPF--NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy--~i~s~il~~L~~~g~~~ 244 (397)
..+.+|+|++|+|. .+...+...|.++|.++
T Consensus 176 ------------~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~ 208 (275)
T 1yb2_A 176 ------------SDQMYDAVIADIPDPWNHVQKIASMMKPGSVAT 208 (275)
T ss_dssp ------------CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEE
T ss_pred ------------cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEE
Confidence 23579999999874 34556666777777654
No 104
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.08 E-value=3.3e-10 Score=110.38 Aligned_cols=110 Identities=19% Similarity=0.262 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-C--CcEEEEeCCHHHHHHHHHHhcc-------------CCc
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQHMVGLVRERFAS-------------IDQ 188 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~--~~V~~vE~d~~~i~~a~~~~~~-------------~~~ 188 (397)
..+.....+++.+.+.++++|||+|||+|.++..+++. + .+|+++|+++.+++.|++++.. .++
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 55677888899999999999999999999999999987 4 7899999999999999998763 248
Q ss_pred eEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCc--CcHHHHHHhccCCCce
Q 015990 189 LKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN--ISTDVIKQLLPMGDIF 244 (397)
Q Consensus 189 v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~--i~s~il~~L~~~g~~~ 244 (397)
++++.+|+.+.... + ..+.+|.|++|+|.. ....+...|.++|.++
T Consensus 169 v~~~~~d~~~~~~~--~--------~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv 216 (336)
T 2b25_A 169 VDFIHKDISGATED--I--------KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCA 216 (336)
T ss_dssp EEEEESCTTCCC-----------------EEEEEECSSSTTTTHHHHGGGEEEEEEEE
T ss_pred eEEEECChHHcccc--c--------CCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEE
Confidence 99999999876311 0 124699999997643 3455666677777654
No 105
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.08 E-value=7e-10 Score=104.04 Aligned_cols=93 Identities=13% Similarity=0.142 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccC---CceEEEEcccccc
Q 015990 125 LNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKC 199 (397)
Q Consensus 125 ~~~~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~ 199 (397)
..+....+++..+. +.++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|++++... ++++++.+|+.++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 108 (267)
T 3kkz_A 29 GSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL 108 (267)
T ss_dssp CCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC
Confidence 34566777777776 67889999999999999999999854 9999999999999999987654 4699999999887
Q ss_pred chhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
++. .+.+|+|+++.+++.
T Consensus 109 ~~~------------~~~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 109 PFR------------NEELDLIWSEGAIYN 126 (267)
T ss_dssp CCC------------TTCEEEEEESSCGGG
T ss_pred CCC------------CCCEEEEEEcCCcee
Confidence 642 367999999877644
No 106
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.08 E-value=2.8e-10 Score=109.63 Aligned_cols=98 Identities=10% Similarity=0.286 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCH 200 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~ 200 (397)
...+.+++.+++.+.+.++.+|||+|||+|..+..+++. +++|+|+|+|+.+++.|++++..+ ++++++++|+.+++
T Consensus 9 ~h~pvLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 9 RHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp SCCCTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred cccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 345667888999999999999999999999999999987 479999999999999999998765 48999999998764
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.. +.. .....+|.|+.|+|+.
T Consensus 89 ~~------l~~-~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 89 FL------LKT-LGIEKVDGILMDLGVS 109 (301)
T ss_dssp HH------HHH-TTCSCEEEEEEECSCC
T ss_pred HH------HHh-cCCCCCCEEEEcCccc
Confidence 21 110 0114799999999964
No 107
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.08 E-value=5.3e-10 Score=102.18 Aligned_cols=137 Identities=11% Similarity=0.074 Sum_probs=92.0
Q ss_pred CCChHHHHHHHHhcCCCccccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHH
Q 015990 98 DDDYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQH 174 (397)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~ 174 (397)
..+++.+...+.++... ......+.+.....+...+...++.+|||||||+|.++..+++. +++|++||+++.
T Consensus 19 ~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~ 94 (221)
T 3u81_A 19 PGDPQSVLEAIDTYCTQ----KEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPD 94 (221)
T ss_dssp TTCHHHHHHHHHHHHHH----HTCGGGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH
T ss_pred CCCHHHHHHHHHHHhhh----cCcCcccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChH
Confidence 34455666666543221 11224566777777766666667889999999999999999984 679999999999
Q ss_pred HHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHH---HH---HHhccCCCce
Q 015990 175 MVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTD---VI---KQLLPMGDIF 244 (397)
Q Consensus 175 ~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~---il---~~L~~~g~~~ 244 (397)
+++.|++++...+ +++++++|+.+..... ... ...+.+|+|+.+.+.....+ ++ ..|.++|.++
T Consensus 95 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~-----~~~-~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv 167 (221)
T 3u81_A 95 CAAITQQMLNFAGLQDKVTILNGASQDLIPQL-----KKK-YDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL 167 (221)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEESCHHHHGGGT-----TTT-SCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEE
T ss_pred HHHHHHHHHHHcCCCCceEEEECCHHHHHHHH-----HHh-cCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEE
Confidence 9999999876533 6999999987642110 000 01157999999876544332 22 2345666543
No 108
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.08 E-value=3.7e-10 Score=103.56 Aligned_cols=102 Identities=16% Similarity=0.115 Sum_probs=79.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEcccc-ccchhhhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFV-KCHIRSHML 206 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~-~~~~~~~~~ 206 (397)
.+++.++... +.++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++ .++++++++|+. ..++.
T Consensus 36 ~l~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~d~~~~~~~~---- 107 (226)
T 3m33_A 36 LTFDLWLSRL-LTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---APHADVYEWNGKGELPAG---- 107 (226)
T ss_dssp HHHHHHHHHH-CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---CTTSEEEECCSCSSCCTT----
T ss_pred HHHHHHHHhc-CCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---CCCceEEEcchhhccCCc----
Confidence 4455555433 35778999999999999999999999999999999999999998 358999999995 34321
Q ss_pred hHHhhhcCCCCcceEeecC-CCcCcHHHHHHhccCCCce
Q 015990 207 SLFERRKSSSGFAKVVANI-PFNISTDVIKQLLPMGDIF 244 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~Nl-Py~i~s~il~~L~~~g~~~ 244 (397)
..+.+|+|+++. |-.....+.+.|.++|.++
T Consensus 108 -------~~~~fD~v~~~~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 108 -------LGAPFGLIVSRRGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -------CCCCEEEEEEESCCSGGGGGHHHHEEEEEEEE
T ss_pred -------CCCCEEEEEeCCCHHHHHHHHHHHcCCCcEEE
Confidence 136799999984 2345556777788887665
No 109
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.08 E-value=2.9e-10 Score=104.04 Aligned_cols=107 Identities=11% Similarity=0.114 Sum_probs=79.3
Q ss_pred HHHHHHHH---HhcCCCCCEEEEEcCcccHHHHHHHHc-C--CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccch
Q 015990 128 EINDQLAA---AAAVQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHI 201 (397)
Q Consensus 128 ~i~~~i~~---~~~~~~~~~VLEIG~G~G~lt~~La~~-~--~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~ 201 (397)
.....++. .+.+.++++|||+|||+|.++..+++. + ++|+|+|+++.+++.++++....++++++++|+.+...
T Consensus 57 ~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 136 (227)
T 1g8a_A 57 KLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE 136 (227)
T ss_dssp HHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG
T ss_pred hHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcch
Confidence 44456633 334678899999999999999999986 3 69999999999999999998776799999999987431
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCCcCc-----HHHHHHhccCCCc
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPFNIS-----TDVIKQLLPMGDI 243 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~-----s~il~~L~~~g~~ 243 (397)
... ..+.+|+|++|+|.... ..+.+.|.++|.+
T Consensus 137 ~~~---------~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l 174 (227)
T 1g8a_A 137 YRA---------LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYG 174 (227)
T ss_dssp GTT---------TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEE
T ss_pred hhc---------ccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEE
Confidence 100 12479999999884322 2234456666654
No 110
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.08 E-value=6.1e-10 Score=104.46 Aligned_cols=90 Identities=22% Similarity=0.290 Sum_probs=75.8
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~ 203 (397)
.+.+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++... ++++++.+|+.+.++.
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 126 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE- 126 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC-
Confidence 45677888888889999999999999999999985 789999999999999999987643 3799999999887642
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.+.+|+|+++-.++.
T Consensus 127 -----------~~~fD~v~~~~~l~~ 141 (273)
T 3bus_A 127 -----------DASFDAVWALESLHH 141 (273)
T ss_dssp -----------TTCEEEEEEESCTTT
T ss_pred -----------CCCccEEEEechhhh
Confidence 357999998866543
No 111
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.08 E-value=5.1e-10 Score=105.90 Aligned_cols=107 Identities=19% Similarity=0.306 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccc
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVK 198 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~ 198 (397)
..+..+..++..+.+.++++|||+|||+|.++..+++. +.+|+++|+++.+++.|++++... ++++++.+|+.+
T Consensus 96 ~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 175 (277)
T 1o54_A 96 VYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISE 175 (277)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG
T ss_pred cCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 34556678888899999999999999999999999987 569999999999999999998654 379999999987
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCc--CcHHHHHHhccCCCce
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFN--ISTDVIKQLLPMGDIF 244 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~--i~s~il~~L~~~g~~~ 244 (397)
. + ..+.+|+|++|+|.. +...+...|.++|.++
T Consensus 176 ~-~------------~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~ 210 (277)
T 1o54_A 176 G-F------------DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFA 210 (277)
T ss_dssp C-C------------SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEE
T ss_pred c-c------------cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEE
Confidence 6 2 225799999999864 4456666777776554
No 112
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.08 E-value=4.7e-10 Score=104.33 Aligned_cols=107 Identities=24% Similarity=0.409 Sum_probs=81.9
Q ss_pred CHHHHHHHHHHh-----cCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEcccccc
Q 015990 126 NSEINDQLAAAA-----AVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKC 199 (397)
Q Consensus 126 ~~~i~~~i~~~~-----~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~ 199 (397)
++...+.+++.+ .+.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.+++++.. .++++++.+|+.++
T Consensus 19 ~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 98 (263)
T 2yqz_A 19 PPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI 98 (263)
T ss_dssp CHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC
T ss_pred ChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC
Confidence 345556666655 567788999999999999999999999999999999999999998732 25899999999887
Q ss_pred chhhhhhhHHhhhcCCCCcceEeecCCCcCcH-------HHHHHhccCCCce
Q 015990 200 HIRSHMLSLFERRKSSSGFAKVVANIPFNIST-------DVIKQLLPMGDIF 244 (397)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s-------~il~~L~~~g~~~ 244 (397)
++. .+.+|+|+++..++... .+.+.|.++|.++
T Consensus 99 ~~~------------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 138 (263)
T 2yqz_A 99 PLP------------DESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALL 138 (263)
T ss_dssp CSC------------TTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEE
T ss_pred CCC------------CCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEE
Confidence 542 35799999987765432 2344555666543
No 113
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.08 E-value=1.4e-10 Score=109.56 Aligned_cols=99 Identities=22% Similarity=0.372 Sum_probs=79.8
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHH
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
.+.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+++.|++.++++. ++++++.+|+.++++
T Consensus 46 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~-------- 114 (279)
T 3ccf_A 46 GEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY---PHLHFDVADARNFRV-------- 114 (279)
T ss_dssp CCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTSCEEECCTTTCCC--------
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC---CCCEEEECChhhCCc--------
Confidence 345677778888899999999999999999998899999999999999999886 578999999988753
Q ss_pred hhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 210 ERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
.+.+|+|+++..++.. ..+.+.|.++|.++
T Consensus 115 -----~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~ 151 (279)
T 3ccf_A 115 -----DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFV 151 (279)
T ss_dssp -----SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEE
Confidence 2579999988766432 23445566666554
No 114
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.08 E-value=4.5e-10 Score=111.29 Aligned_cols=118 Identities=13% Similarity=0.173 Sum_probs=89.6
Q ss_pred CccccCCCccCCCHHHHHHHHHHh--cCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC--
Q 015990 114 FPRKSLGQHYMLNSEINDQLAAAA--AVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-- 187 (397)
Q Consensus 114 ~~~k~~GQnfl~~~~i~~~i~~~~--~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~-- 187 (397)
.+...+.|.|...+.....++... ...++.+|||+| |+|.++..++..+ .+|+++|+|+.+++.|++++...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~ 221 (373)
T 2qm3_A 143 EPLHEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE 221 (373)
T ss_dssp CCCGGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC
T ss_pred ccchhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 456678888887777776666432 234678999999 9999999999875 589999999999999999986543
Q ss_pred ceEEEEccccc-cchhhhhhhHHhhhcCCCCcceEeecCCCcCc------HHHHHHhccCCCc
Q 015990 188 QLKVLQEDFVK-CHIRSHMLSLFERRKSSSGFAKVVANIPFNIS------TDVIKQLLPMGDI 243 (397)
Q Consensus 188 ~v~ii~gD~~~-~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~------s~il~~L~~~g~~ 243 (397)
+++++++|+.+ ++.. ..+.||+|++|+||... ..+.+.|.++|.+
T Consensus 222 ~v~~~~~D~~~~l~~~-----------~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 222 DIEIFTFDLRKPLPDY-----------ALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp CEEEECCCTTSCCCTT-----------TSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCE
T ss_pred CEEEEEChhhhhchhh-----------ccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeE
Confidence 89999999988 4321 12479999999999653 3344556666643
No 115
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.08 E-value=6.9e-10 Score=100.74 Aligned_cols=90 Identities=17% Similarity=0.314 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC-------ceEEEEcccc
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-------QLKVLQEDFV 197 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~-------~v~ii~gD~~ 197 (397)
+...+.+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|++++...+ +++++++|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4566777887777788899999999999999999975 599999999999999999986443 7999999986
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
..+.. .+.+|+|+++-.++
T Consensus 95 ~~~~~------------~~~fD~v~~~~~l~ 113 (217)
T 3jwh_A 95 YQDKR------------FHGYDAATVIEVIE 113 (217)
T ss_dssp SCCGG------------GCSCSEEEEESCGG
T ss_pred ccccc------------CCCcCEEeeHHHHH
Confidence 65432 25799999876553
No 116
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.07 E-value=5.7e-10 Score=101.39 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++... .+++++.+|+.+.++. .+.+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------------~~~~ 104 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFE------------DKTF 104 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSC------------TTCE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCC------------CCcE
Confidence 34789999999999999999999889999999999999999987654 4899999999886532 3579
Q ss_pred ceEeecCC
Q 015990 219 AKVVANIP 226 (397)
Q Consensus 219 d~Vv~NlP 226 (397)
|+|+++.+
T Consensus 105 D~v~~~~~ 112 (227)
T 1ve3_A 105 DYVIFIDS 112 (227)
T ss_dssp EEEEEESC
T ss_pred EEEEEcCc
Confidence 99999988
No 117
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.07 E-value=9.8e-10 Score=105.77 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=80.8
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~ 203 (397)
..++.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|++++... ++++++.+|+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 45567777778888999999999999999999987 889999999999999999998654 36999999987652
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCcCc---------HHHHHHhccCCCcee
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFNIS---------TDVIKQLLPMGDIFS 245 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~i~---------s~il~~L~~~g~~~~ 245 (397)
+.+|+|+++..++.. ..+.+.|.++|.++.
T Consensus 154 ------------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 154 ------------EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp ------------CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred ------------CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 468999888544322 234455667766543
No 118
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.07 E-value=6.1e-10 Score=103.20 Aligned_cols=84 Identities=21% Similarity=0.321 Sum_probs=69.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~~ 206 (397)
..+..++......++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++....+ +++++++|+.+.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~----- 102 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF----- 102 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc-----
Confidence 344555665555677899999999999999999999999999999999999999886544 79999999988753
Q ss_pred hHHhhhcCCCCcceEeec
Q 015990 207 SLFERRKSSSGFAKVVAN 224 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~N 224 (397)
.+.+|+|+++
T Consensus 103 --------~~~fD~v~~~ 112 (252)
T 1wzn_A 103 --------KNEFDAVTMF 112 (252)
T ss_dssp --------CSCEEEEEEC
T ss_pred --------CCCccEEEEc
Confidence 2568998853
No 119
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.06 E-value=4.1e-10 Score=102.73 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=72.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.++.+|||||||+|.++..+++. +.+|+|||+++.+++.|++++... +|++++++|+.+++. .+ ..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~--~~--------~~ 106 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD--VF--------EP 106 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH--HC--------CT
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh--hc--------Cc
Confidence 35679999999999999999987 679999999999999999987644 489999999987531 00 23
Q ss_pred CCcceEeecCCCcC---------------cHHHHHHhccCCCce
Q 015990 216 SGFAKVVANIPFNI---------------STDVIKQLLPMGDIF 244 (397)
Q Consensus 216 ~~~d~Vv~NlPy~i---------------~s~il~~L~~~g~~~ 244 (397)
+.+|.|+.|.|..+ ...+.+.|.++|.++
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~ 150 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIH 150 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEE
T ss_pred CCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEE
Confidence 56899988865321 233455677777553
No 120
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.06 E-value=2.3e-10 Score=114.33 Aligned_cols=93 Identities=22% Similarity=0.324 Sum_probs=71.0
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccch
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHI 201 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~ 201 (397)
+..+....+.++... ..++++|||+|||+|.++..+++.|++|+++|+|+.+++.|++++..++ ..++.++|+.++..
T Consensus 197 ~f~dqr~~r~~l~~~-~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~ 275 (393)
T 4dmg_A 197 YYLDQRENRRLFEAM-VRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLR 275 (393)
T ss_dssp SCGGGHHHHHHHHTT-CCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHH
T ss_pred cCCCHHHHHHHHHHH-hcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHH
Confidence 444445555555433 2458899999999999999999998889999999999999999986544 34577899877531
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
. ..+.||+|+.|+|+
T Consensus 276 ~-----------~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 276 G-----------LEGPFHHVLLDPPT 290 (393)
T ss_dssp T-----------CCCCEEEEEECCCC
T ss_pred H-----------hcCCCCEEEECCCc
Confidence 1 12349999999998
No 121
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.06 E-value=5.8e-10 Score=103.24 Aligned_cols=89 Identities=19% Similarity=0.216 Sum_probs=73.4
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~ 206 (397)
.....+++.+...++.+|||||||+|.++..+++.+ .+|+++|+++.+++.|++++...++++++++|+.+.++.
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~---- 155 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLP---- 155 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCC----
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCC----
Confidence 344566777777788999999999999999999874 579999999999999999987657899999999887542
Q ss_pred hHHhhhcCCCCcceEeecCCCc
Q 015990 207 SLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.+.+|+|+++..++
T Consensus 156 --------~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 156 --------PNTYDLIVIQWTAI 169 (254)
T ss_dssp --------SSCEEEEEEESCGG
T ss_pred --------CCCeEEEEEcchhh
Confidence 35799999876653
No 122
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.06 E-value=3.1e-10 Score=113.06 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=75.1
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC----ceEEEEcccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID----QLKVLQEDFV 197 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~----~v~ii~gD~~ 197 (397)
|..|+...+.++...- .++++|||+|||+|.++..+++.++ +|+|||+|+.+++.|++++..++ +++++++|+.
T Consensus 195 ff~~~~~~~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~ 273 (385)
T 2b78_A 195 IFLDQRQVRNELINGS-AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF 273 (385)
T ss_dssp SCGGGHHHHHHHHHTT-TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH
T ss_pred cCCcHHHHHHHHHHHh-cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHH
Confidence 3466666666655432 5778999999999999999999765 89999999999999999987553 7999999998
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
++... +.. ....||+|+.|+|+.
T Consensus 274 ~~l~~-----~~~---~~~~fD~Ii~DPP~~ 296 (385)
T 2b78_A 274 DYFKY-----ARR---HHLTYDIIIIDPPSF 296 (385)
T ss_dssp HHHHH-----HHH---TTCCEEEEEECCCCC
T ss_pred HHHHH-----HHH---hCCCccEEEECCCCC
Confidence 74211 110 235799999999994
No 123
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.06 E-value=5.9e-10 Score=105.83 Aligned_cols=109 Identities=17% Similarity=0.260 Sum_probs=85.5
Q ss_pred cCCCHHHHHHHHHHh-cCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEcccc
Q 015990 123 YMLNSEINDQLAAAA-AVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFV 197 (397)
Q Consensus 123 fl~~~~i~~~i~~~~-~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~ 197 (397)
+..++.....+++.+ .+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ +++++.+|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~ 82 (284)
T 3gu3_A 3 LYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT 82 (284)
T ss_dssp TTCCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT
T ss_pred cccchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh
Confidence 445677888888776 5678899999999999999999987 5799999999999999999987655 8999999999
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
++++ .+.+|+|+++..++.. ..+.+.|.++|.++
T Consensus 83 ~~~~-------------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 83 EIEL-------------NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp TCCC-------------SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEE
T ss_pred hcCc-------------CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEE
Confidence 8754 2579999988664332 23344556666543
No 124
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.06 E-value=7e-10 Score=101.89 Aligned_cols=99 Identities=20% Similarity=0.288 Sum_probs=77.3
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++... .+++++.+|+.+.++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~~--------- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-TGITYERADLDKLHL--------- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-SSEEEEECCGGGCCC---------
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-CCceEEEcChhhccC---------
Confidence 456666767888999999999999999999987 999999999999999998754 479999999988753
Q ss_pred hhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCc
Q 015990 211 RRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDI 243 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~ 243 (397)
..+.+|+|+++..++.. ..+.+.|.++|.+
T Consensus 104 ---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l 140 (243)
T 3bkw_A 104 ---PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHF 140 (243)
T ss_dssp ---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEE
T ss_pred ---CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEE
Confidence 23579999988765432 1233445555544
No 125
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.06 E-value=3.4e-10 Score=101.48 Aligned_cols=71 Identities=21% Similarity=0.360 Sum_probs=62.3
Q ss_pred CCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceE
Q 015990 142 GDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKV 221 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~V 221 (397)
+.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++. ++++++++|+.++++ ..+.+|+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~------------~~~~fD~v 106 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH---PSVTFHHGTITDLSD------------SPKRWAGL 106 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC---TTSEEECCCGGGGGG------------SCCCEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC---CCCeEEeCccccccc------------CCCCeEEE
Confidence 679999999999999999999999999999999999999984 479999999988754 23679999
Q ss_pred eecCCC
Q 015990 222 VANIPF 227 (397)
Q Consensus 222 v~NlPy 227 (397)
+++..+
T Consensus 107 ~~~~~l 112 (203)
T 3h2b_A 107 LAWYSL 112 (203)
T ss_dssp EEESSS
T ss_pred EehhhH
Confidence 987554
No 126
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.06 E-value=5.4e-10 Score=99.32 Aligned_cols=84 Identities=18% Similarity=0.199 Sum_probs=70.8
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHH
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++... ++++++.+|+.+.++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-------- 94 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-------- 94 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC--------
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC--------
Confidence 4556667677889999999999999999999899999999999999999987543 379999999988753
Q ss_pred hhhcCCCCcceEeecCCCc
Q 015990 210 ERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy~ 228 (397)
.+.+|+|+++.+++
T Consensus 95 -----~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 95 -----DRQYDFILSTVVLM 108 (199)
T ss_dssp -----CCCEEEEEEESCGG
T ss_pred -----CCCceEEEEcchhh
Confidence 25789999887654
No 127
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.05 E-value=1.5e-09 Score=102.74 Aligned_cols=103 Identities=16% Similarity=0.176 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHH-cCCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLN-AGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~ 203 (397)
..++.+++.+.+.++.+|||||||+|.++..+++ .+.+|+|+|+|+.+++.+++++... ++++++.+|+.+++
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---
Confidence 3456677777888899999999999999999995 5889999999999999999988653 38999999997652
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCc-C--------cHHHHHHhccCCCcee
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFN-I--------STDVIKQLLPMGDIFS 245 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~-i--------~s~il~~L~~~g~~~~ 245 (397)
+.+|+|+++-.++ + ...+.+.|+++|.++.
T Consensus 128 ------------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 128 ------------EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp ------------CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred ------------CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 4689998875432 2 1234455667776543
No 128
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.05 E-value=4.3e-10 Score=107.41 Aligned_cols=105 Identities=27% Similarity=0.402 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-----CceEEEEccccccc
Q 015990 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-----DQLKVLQEDFVKCH 200 (397)
Q Consensus 126 ~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-----~~v~ii~gD~~~~~ 200 (397)
.......+++.+...++ +|||||||+|.++..+++.+.+|+|+|+|+.+++.|++++... .+++++++|+.+++
T Consensus 68 ~~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 68 GTSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred ccHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 35667778888775544 9999999999999999999999999999999999999998764 47999999999875
Q ss_pred hhhhhhhHHhhhcCCCCcceEee-cCCCc-Cc--------HHHHHHhccCCCce
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVA-NIPFN-IS--------TDVIKQLLPMGDIF 244 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~-NlPy~-i~--------s~il~~L~~~g~~~ 244 (397)
+ .+.+|.|+. +..++ +. ..+.+.|.++|.++
T Consensus 147 ~-------------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~ 187 (299)
T 3g2m_A 147 L-------------DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFL 187 (299)
T ss_dssp C-------------SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred c-------------CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 4 257897773 33222 22 23444566666554
No 129
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.05 E-value=4.4e-10 Score=116.60 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=84.7
Q ss_pred CCccccCCCccCCCHHHHHHHHHHhc----CCCCCEEEEEcCcccHHHHHHHHc-----CCcEEEEeCCHHHHHHHHHHh
Q 015990 113 RFPRKSLGQHYMLNSEINDQLAAAAA----VQEGDIVLEIGPGTGSLTNVLLNA-----GATVLAIEKDQHMVGLVRERF 183 (397)
Q Consensus 113 ~~~~k~~GQnfl~~~~i~~~i~~~~~----~~~~~~VLEIG~G~G~lt~~La~~-----~~~V~~vE~d~~~i~~a~~~~ 183 (397)
...++..|| |.+++.+++.|++.+. ..++.+|+|.+||+|.+...+++. ..+++|+|+|+.++..|+.++
T Consensus 190 ~~~~k~~G~-fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl 268 (542)
T 3lkd_A 190 TDSGKKAGE-FYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNM 268 (542)
T ss_dssp CC---CCSS-CCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHhcccCCe-ecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHH
Confidence 345677899 8899999999999987 557889999999999998887775 458999999999999999986
Q ss_pred ccC----CceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 184 ASI----DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 184 ~~~----~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
..+ +++.+.++|.+..++.. .....+|+||+||||..
T Consensus 269 ~l~gi~~~~~~I~~gDtL~~d~p~---------~~~~~fD~IvaNPPf~~ 309 (542)
T 3lkd_A 269 ILHGVPIENQFLHNADTLDEDWPT---------QEPTNFDGVLMNPPYSA 309 (542)
T ss_dssp HHTTCCGGGEEEEESCTTTSCSCC---------SSCCCBSEEEECCCTTC
T ss_pred HHcCCCcCccceEecceecccccc---------cccccccEEEecCCcCC
Confidence 433 36889999998763211 02367999999999963
No 130
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.05 E-value=4e-10 Score=110.35 Aligned_cols=102 Identities=19% Similarity=0.340 Sum_probs=78.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~ 205 (397)
.+.|.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++ +++.|++++..+ ++++++++|+.++++.
T Consensus 53 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~--- 128 (340)
T 2fyt_A 53 RDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLP--- 128 (340)
T ss_dssp HHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCS---
T ss_pred HHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCC---
Confidence 35566666677889999999999999999999875 899999996 999999987654 4899999999987542
Q ss_pred hhHHhhhcCCCCcceEeecC-CCcCc-----HHH----HHHhccCCCce
Q 015990 206 LSLFERRKSSSGFAKVVANI-PFNIS-----TDV----IKQLLPMGDIF 244 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~Nl-Py~i~-----s~i----l~~L~~~g~~~ 244 (397)
.+.+|+|+++. +|... ..+ .+.|+++|.++
T Consensus 129 ---------~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 129 ---------VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ---------CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ---------CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 25799999986 55431 122 34566777654
No 131
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.04 E-value=2.9e-10 Score=105.44 Aligned_cols=105 Identities=19% Similarity=0.182 Sum_probs=76.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~ 205 (397)
.+...+.+.+. .+|.+|||||||+|..+..+++. +.+|++||+|+.+++.|+++....+ +++++.+|+......
T Consensus 48 ~~m~~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~--- 123 (236)
T 3orh_A 48 PYMHALAAAAS-SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT--- 123 (236)
T ss_dssp HHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG---
T ss_pred HHHHHHHHhhc-cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccc---
Confidence 34444555443 57889999999999999999986 4689999999999999999987654 889999998765322
Q ss_pred hhHHhhhcCCCCcceEeecCCC------cC------cHHHHHHhccCCCc
Q 015990 206 LSLFERRKSSSGFAKVVANIPF------NI------STDVIKQLLPMGDI 243 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy------~i------~s~il~~L~~~g~~ 243 (397)
...+.||.|+.+... +. ..++.+.|+++|.+
T Consensus 124 -------~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l 166 (236)
T 3orh_A 124 -------LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp -------SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred -------ccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEE
Confidence 123578888766432 11 12355667777654
No 132
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.04 E-value=6.2e-10 Score=102.36 Aligned_cols=112 Identities=16% Similarity=0.185 Sum_probs=86.4
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEcccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFV 197 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~ 197 (397)
++.++.....+...+...++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++... ++++++.+|+.
T Consensus 36 ~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 115 (233)
T 2gpy_A 36 PIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL 115 (233)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG
T ss_pred CCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 3678888888888887778899999999999999999997 679999999999999999998654 36999999998
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHH----HhccCCCc
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK----QLLPMGDI 243 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~----~L~~~g~~ 243 (397)
+.... . ...+.+|+|+.+.+......++. .|.++|.+
T Consensus 116 ~~~~~------~---~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~l 156 (233)
T 2gpy_A 116 QLGEK------L---ELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLI 156 (233)
T ss_dssp GSHHH------H---TTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEE
T ss_pred HHHHh------c---ccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEE
Confidence 75211 0 01357999999988654444444 34455543
No 133
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.04 E-value=6.4e-10 Score=99.87 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=76.4
Q ss_pred CCCHHHHHHHHHHh-cCCCCCEEEEEcCcccHHH-HHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccc
Q 015990 124 MLNSEINDQLAAAA-AVQEGDIVLEIGPGTGSLT-NVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCH 200 (397)
Q Consensus 124 l~~~~i~~~i~~~~-~~~~~~~VLEIG~G~G~lt-~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~ 200 (397)
+.+...+.++++.+ ...++.+|||+|||+|.++ ..++..+.+|+|+|+|+.+++.+++++... .+++++++|+.+.+
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 84 (209)
T 2p8j_A 5 IIRQPQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP 84 (209)
T ss_dssp CCSCTHHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC
T ss_pred hhhhhhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC
Confidence 33444444555443 3456789999999999984 555667889999999999999999987543 47899999998875
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCC-CcCc-H-------HHHHHhccCCCce
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIP-FNIS-T-------DVIKQLLPMGDIF 244 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlP-y~i~-s-------~il~~L~~~g~~~ 244 (397)
+. .+.+|.|+++-. +++. . .+.+.|.++|.++
T Consensus 85 ~~------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 125 (209)
T 2p8j_A 85 FK------------DESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLAC 125 (209)
T ss_dssp SC------------TTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CC------------CCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 42 357899998754 3442 1 2344555666543
No 134
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.04 E-value=2.9e-10 Score=110.14 Aligned_cols=95 Identities=16% Similarity=0.257 Sum_probs=75.7
Q ss_pred CCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEc
Q 015990 120 GQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI--DQLKVLQE 194 (397)
Q Consensus 120 GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~g 194 (397)
|.-++.|+ ....+...+.+.++++|||+|||+|..|..+++. +++|+|+|+|+.+++.+++++... .+++++++
T Consensus 98 G~~~~qd~-~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~ 176 (315)
T 1ixk_A 98 GLIYIQEA-SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS 176 (315)
T ss_dssp TSEEECCH-HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS
T ss_pred ceEEEeCH-HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 44334443 3345566778889999999999999999999985 368999999999999999998653 38999999
Q ss_pred cccccchhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 195 DFVKCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 195 D~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
|+.+++. ..+.||.|++|+|+
T Consensus 177 D~~~~~~------------~~~~fD~Il~d~Pc 197 (315)
T 1ixk_A 177 SSLHIGE------------LNVEFDKILLDAPC 197 (315)
T ss_dssp CGGGGGG------------GCCCEEEEEEECCT
T ss_pred Chhhccc------------ccccCCEEEEeCCC
Confidence 9988643 12579999999995
No 135
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.03 E-value=4.8e-10 Score=103.06 Aligned_cols=100 Identities=15% Similarity=0.222 Sum_probs=75.6
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~~ 206 (397)
+..++......+ .+|||||||+|.++..+++.+.+|+|+|+++.+++.|++++... .+++++.+|+.+.+.
T Consensus 56 l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 129 (235)
T 3lcc_A 56 IVHLVDTSSLPL-GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP----- 129 (235)
T ss_dssp HHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-----
T ss_pred HHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-----
Confidence 344455455444 49999999999999999998889999999999999999998753 379999999998753
Q ss_pred hHHhhhcCCCCcceEeecCCCcC-c--------HHHHHHhccCCCc
Q 015990 207 SLFERRKSSSGFAKVVANIPFNI-S--------TDVIKQLLPMGDI 243 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~i-~--------s~il~~L~~~g~~ 243 (397)
...+|+|+++..++. . ..+.+.|.++|.+
T Consensus 130 --------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 167 (235)
T 3lcc_A 130 --------TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGEL 167 (235)
T ss_dssp --------SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEE
T ss_pred --------CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEE
Confidence 247999998765532 2 2334455666654
No 136
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.03 E-value=7e-10 Score=101.94 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=77.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~ 207 (397)
.+.+.+...+ .++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++.. ..+++++.+|+.+.++.
T Consensus 42 ~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~----- 113 (242)
T 3l8d_A 42 TIIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGE-GPDLSFIKGDLSSLPFE----- 113 (242)
T ss_dssp THHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTC-BTTEEEEECBTTBCSSC-----
T ss_pred HHHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcc-cCCceEEEcchhcCCCC-----
Confidence 4455555554 367899999999999999999999999999999999999998863 35899999999987642
Q ss_pred HHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCc
Q 015990 208 LFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDI 243 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~ 243 (397)
.+.+|+|+++..++.. ..+.+.|.++|.+
T Consensus 114 -------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l 149 (242)
T 3l8d_A 114 -------NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYA 149 (242)
T ss_dssp -------TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEE
T ss_pred -------CCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEE
Confidence 3679999887665422 2344455566544
No 137
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.03 E-value=1.5e-09 Score=98.95 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEcccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFV 197 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~ 197 (397)
.+++.....+...+...++.+|||||||+|..+..+++. +++|+++|+++.+++.|++++...+ +++++++|+.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 41 DVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 345666666655556667889999999999999999997 6799999999999999999986433 6999999997
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHH----HHHhccCCCc
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDV----IKQLLPMGDI 243 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~i----l~~L~~~g~~ 243 (397)
+.... +.. ...+.+|+|+.+.+....... ...|.++|.+
T Consensus 121 ~~~~~-----~~~--~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~l 163 (223)
T 3duw_A 121 DSLQQ-----IEN--EKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVI 163 (223)
T ss_dssp HHHHH-----HHH--TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEE
T ss_pred HHHHH-----HHh--cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEE
Confidence 65211 111 011469999998875443333 3445556543
No 138
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.03 E-value=7.8e-10 Score=102.68 Aligned_cols=88 Identities=17% Similarity=0.217 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~ 204 (397)
......+++.+...++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++. ++++++.+|+.+.+ .
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~-- 92 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---PNTNFGKADLATWK-P-- 92 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---TTSEEEECCTTTCC-C--
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---CCcEEEECChhhcC-c--
Confidence 355667888888888899999999999999999998 889999999999999999883 58999999998875 2
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
.+.+|+|+++..++..
T Consensus 93 ----------~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 93 ----------AQKADLLYANAVFQWV 108 (259)
T ss_dssp ----------SSCEEEEEEESCGGGS
T ss_pred ----------cCCcCEEEEeCchhhC
Confidence 2579999999876654
No 139
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.02 E-value=7.6e-10 Score=108.16 Aligned_cols=89 Identities=17% Similarity=0.274 Sum_probs=72.3
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
+.++++|||+|||+|.++.. ++.+.+|+|+|+|+.+++.|++++..++ +++++++|+.++.
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------------- 256 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------------- 256 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------------
T ss_pred cCCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------------
Confidence 35788999999999999999 8866799999999999999999987653 7999999998763
Q ss_pred CCcceEeecCCCcCc---HHHHHHhccCCCc
Q 015990 216 SGFAKVVANIPFNIS---TDVIKQLLPMGDI 243 (397)
Q Consensus 216 ~~~d~Vv~NlPy~i~---s~il~~L~~~g~~ 243 (397)
..+|+|+.|+|+... ..+...|.++|.+
T Consensus 257 ~~fD~Vi~dpP~~~~~~l~~~~~~L~~gG~l 287 (336)
T 2yx1_A 257 VKGNRVIMNLPKFAHKFIDKALDIVEEGGVI 287 (336)
T ss_dssp CCEEEEEECCTTTGGGGHHHHHHHEEEEEEE
T ss_pred CCCcEEEECCcHhHHHHHHHHHHHcCCCCEE
Confidence 468999999997643 2344455566544
No 140
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.02 E-value=7.4e-10 Score=99.90 Aligned_cols=83 Identities=18% Similarity=0.183 Sum_probs=68.3
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhH
Q 015990 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 130 ~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~ 208 (397)
...+++.+. ..++.+|||||||+|.++..+++.+.+|+|+|+++.+++.+++ ...++++++++|+.+. .
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~--~~~~~~~~~~~d~~~~-~------- 103 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR--HGLDNVEFRQQDLFDW-T------- 103 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG--GCCTTEEEEECCTTSC-C-------
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh--cCCCCeEEEecccccC-C-------
Confidence 345555554 6677899999999999999999999999999999999999988 2335899999999877 2
Q ss_pred HhhhcCCCCcceEeecCCC
Q 015990 209 FERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~NlPy 227 (397)
..+.+|+|+++..+
T Consensus 104 -----~~~~~D~v~~~~~l 117 (218)
T 3ou2_A 104 -----PDRQWDAVFFAHWL 117 (218)
T ss_dssp -----CSSCEEEEEEESCG
T ss_pred -----CCCceeEEEEechh
Confidence 23689999988654
No 141
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.02 E-value=2.4e-10 Score=99.54 Aligned_cols=95 Identities=15% Similarity=0.240 Sum_probs=74.0
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
.+++.+.+.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++ .++++++.+| ..+
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~~~v~~~~~d-~~~------------ 71 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---FDSVITLSDP-KEI------------ 71 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---CTTSEEESSG-GGS------------
T ss_pred HHHHhcCcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---CCCcEEEeCC-CCC------------
Confidence 455666778888999999999999999999877999999999999999998 3689999999 222
Q ss_pred hcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 212 RKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
..+.+|+|+++..++.. ..+.+.|.++|.++
T Consensus 72 --~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 109 (170)
T 3i9f_A 72 --PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVI 109 (170)
T ss_dssp --CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEE
T ss_pred --CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEE
Confidence 23579999988766543 23445556666543
No 142
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.02 E-value=4.3e-10 Score=111.60 Aligned_cols=101 Identities=20% Similarity=0.296 Sum_probs=77.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~ 205 (397)
.+.|.+.....++.+|||||||+|.++..+++.+. +|+|||++ .+++.|++++..++ +++++++|+.++.+
T Consensus 52 ~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 126 (376)
T 3r0q_C 52 FNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL---- 126 (376)
T ss_dssp HHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC----
T ss_pred HHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc----
Confidence 34444445667889999999999999999999977 99999999 99999999886543 59999999988764
Q ss_pred hhHHhhhcCCCCcceEeecC-CCcCc-----H----HHHHHhccCCCce
Q 015990 206 LSLFERRKSSSGFAKVVANI-PFNIS-----T----DVIKQLLPMGDIF 244 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~Nl-Py~i~-----s----~il~~L~~~g~~~ 244 (397)
.+.+|+|++++ +|... . .+.+.|.++|.++
T Consensus 127 ---------~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li 166 (376)
T 3r0q_C 127 ---------PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMY 166 (376)
T ss_dssp ---------SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEE
T ss_pred ---------CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEE
Confidence 25799999986 44332 1 2234566776654
No 143
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.02 E-value=3.2e-10 Score=104.09 Aligned_cols=76 Identities=22% Similarity=0.250 Sum_probs=61.8
Q ss_pred CCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
++.+|||||||+|.++..+++. +.+|+|||+++.+++.|+++.... .|++++++|+.++... . ...+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~-----~----~~~~ 104 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHK-----M----IPDN 104 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHH-----H----SCTT
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHH-----H----cCCC
Confidence 5679999999999999999987 457999999999999999987654 4899999999875110 0 0236
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
.+|.|+.|.
T Consensus 105 ~~d~v~~~~ 113 (218)
T 3dxy_A 105 SLRMVQLFF 113 (218)
T ss_dssp CEEEEEEES
T ss_pred ChheEEEeC
Confidence 789999993
No 144
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.02 E-value=2.6e-10 Score=111.65 Aligned_cols=87 Identities=17% Similarity=0.234 Sum_probs=73.0
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhh
Q 015990 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 129 i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~ 205 (397)
..+.+++.+...++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++..++ +++++.+|+.+..
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~----- 258 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV----- 258 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-----
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-----
Confidence 45677777766677899999999999999999875 589999999999999999986554 5778899987642
Q ss_pred hhHHhhhcCCCCcceEeecCCCcC
Q 015990 206 LSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.+.+|+|++|+||+.
T Consensus 259 ---------~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 259 ---------KGRFDMIISNPPFHD 273 (343)
T ss_dssp ---------CSCEEEEEECCCCCS
T ss_pred ---------cCCeeEEEECCCccc
Confidence 257999999999974
No 145
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.02 E-value=1.7e-09 Score=115.07 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=85.8
Q ss_pred ChHHHHHHHHhcCCCccccCCCccCCCHHHHHHHHHH----hc--CCCCCEEEEEcCcccHHHHHHHHcC-----CcEEE
Q 015990 100 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAA----AA--VQEGDIVLEIGPGTGSLTNVLLNAG-----ATVLA 168 (397)
Q Consensus 100 ~~~~~~~~l~~~~~~~~k~~GQnfl~~~~i~~~i~~~----~~--~~~~~~VLEIG~G~G~lt~~La~~~-----~~V~~ 168 (397)
........+.++....++..|| |.+++.+++.|++. ++ ..++.+|||.|||+|.+...+++.. .+++|
T Consensus 275 ~~DdL~ell~eya~k~Rkk~Gq-FYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyG 353 (878)
T 3s1s_A 275 TGDELAELIHDIATRGRGHEGV-VPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWA 353 (878)
T ss_dssp SSHHHHHHHHHHHTTSCCCCBS-SSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEE
T ss_pred chHHHHHHHHHHHHHhCCcCce-EcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEE
Confidence 3344555555555566778888 89999999999887 22 2357899999999999999998753 37999
Q ss_pred EeCCHHHHHHH--HHHhcc----CC--ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 169 IEKDQHMVGLV--RERFAS----ID--QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 169 vE~d~~~i~~a--~~~~~~----~~--~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
+|+|+.+++.| +.++.. .+ +..+..+|+...... ....+|+||+||||.
T Consensus 354 vEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~-----------~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 354 NDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE-----------DFANVSVVVMNPPYV 410 (878)
T ss_dssp ECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG-----------GGTTEEEEEECCBCC
T ss_pred EECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc-----------ccCCCCEEEECCCcc
Confidence 99999999999 555432 11 345666777664321 225799999999994
No 146
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.02 E-value=9.8e-10 Score=110.78 Aligned_cols=114 Identities=11% Similarity=0.124 Sum_probs=82.9
Q ss_pred ccCCCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHHHHHHH-------HHHhccC-
Q 015990 117 KSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLV-------RERFASI- 186 (397)
Q Consensus 117 k~~GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~~i~~a-------~~~~~~~- 186 (397)
..+||- .+.++..+++.+.+.++++|||||||+|.++..+++. + .+|+|||+++.+++.| ++++...
T Consensus 221 ~~yGet---~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G 297 (433)
T 1u2z_A 221 YVYGEL---LPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG 297 (433)
T ss_dssp GCCCCB---CHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccc---cHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC
Confidence 455662 2888999999999999999999999999999999986 4 4799999999999988 7776532
Q ss_pred ---CceEEEEccccccc--hhhhhhhHHhhhcCCCCcceEeecCCCcCc------HHHHHHhccCCCc
Q 015990 187 ---DQLKVLQEDFVKCH--IRSHMLSLFERRKSSSGFAKVVANIPFNIS------TDVIKQLLPMGDI 243 (397)
Q Consensus 187 ---~~v~ii~gD~~~~~--~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~------s~il~~L~~~g~~ 243 (397)
++++++++|..... +.. ..+.||+|++|...... .++.+.|.++|.+
T Consensus 298 l~~~nV~~i~gD~~~~~~~~~~----------~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~l 355 (433)
T 1u2z_A 298 MRLNNVEFSLKKSFVDNNRVAE----------LIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKI 355 (433)
T ss_dssp BCCCCEEEEESSCSTTCHHHHH----------HGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEE
T ss_pred CCCCceEEEEcCcccccccccc----------ccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEE
Confidence 48999998755321 110 12478999987443221 2344556666654
No 147
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.02 E-value=8.6e-10 Score=101.50 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=74.4
Q ss_pred HhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh
Q 015990 136 AAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 136 ~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
.+.+.++++|||+|||+|.++..+++. +.+|+|+|+++.+++.+.++....++++++.+|+.+.....
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~--------- 142 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYR--------- 142 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGG---------
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhc---------
Confidence 445678899999999999999999987 36999999999988877777665578999999998753100
Q ss_pred cCCCCcceEeecCCCcCc-----HHHHHHhccCCCce
Q 015990 213 KSSSGFAKVVANIPFNIS-----TDVIKQLLPMGDIF 244 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~i~-----s~il~~L~~~g~~~ 244 (397)
...+.+|+|++|+|.... ..+...|.++|.++
T Consensus 143 ~~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~ 179 (233)
T 2ipx_A 143 MLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFV 179 (233)
T ss_dssp GGCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEE
Confidence 023579999999883211 12445566776554
No 148
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.02 E-value=1e-09 Score=110.76 Aligned_cols=91 Identities=18% Similarity=0.266 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchh
Q 015990 125 LNSEINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIR 202 (397)
Q Consensus 125 ~~~~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~ 202 (397)
.++...+.+.+.+. +.++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..++ +++++.+|+.++..
T Consensus 273 ~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 273 TNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV- 351 (425)
T ss_dssp SBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-
T ss_pred cCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-
Confidence 34444444433321 5677899999999999999999998999999999999999999986433 38999999988631
Q ss_pred hhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
..+|+|+.|+|+.-
T Consensus 352 -------------~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 352 -------------KGFDTVIVDPPRAG 365 (425)
T ss_dssp -------------TTCSEEEECCCTTC
T ss_pred -------------cCCCEEEEcCCccc
Confidence 26899999999853
No 149
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.01 E-value=7.2e-10 Score=108.88 Aligned_cols=95 Identities=20% Similarity=0.254 Sum_probs=73.3
Q ss_pred hcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhh
Q 015990 137 AAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 137 ~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
..+.++.+|||||||+|.++..+++.+. +|+|||++ ++++.|+++...++ +++++++|+.++++.
T Consensus 62 ~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---------- 130 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELP---------- 130 (349)
T ss_dssp HHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----------
T ss_pred cccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCC----------
Confidence 3445788999999999999999999865 99999999 59999999886543 599999999988642
Q ss_pred cCCCCcceEeecCCCcCc------H----HHHHHhccCCCce
Q 015990 213 KSSSGFAKVVANIPFNIS------T----DVIKQLLPMGDIF 244 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~i~------s----~il~~L~~~g~~~ 244 (397)
.+.+|+|+++.+.+.. . .+.+.|+++|.++
T Consensus 131 --~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 131 --VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp --SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred --CCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 3689999998652221 2 2235566777654
No 150
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.01 E-value=1.4e-09 Score=99.80 Aligned_cols=88 Identities=20% Similarity=0.253 Sum_probs=72.1
Q ss_pred HHHHHHHHHhcCC--CCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhh
Q 015990 128 EINDQLAAAAAVQ--EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 128 ~i~~~i~~~~~~~--~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~ 204 (397)
...+.+.+.+... ++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++...+ +++++++|+.+.++
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--- 98 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI--- 98 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC---
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCc---
Confidence 4555566655433 67899999999999999999999999999999999999999886554 79999999988753
Q ss_pred hhhHHhhhcCCCCcceEeecC-CCc
Q 015990 205 MLSLFERRKSSSGFAKVVANI-PFN 228 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~Nl-Py~ 228 (397)
. +.+|+|+++. .++
T Consensus 99 ---------~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 99 ---------N-RKFDLITCCLDSTN 113 (246)
T ss_dssp ---------S-CCEEEEEECTTGGG
T ss_pred ---------c-CCceEEEEcCcccc
Confidence 2 5789999876 543
No 151
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.01 E-value=6.4e-10 Score=101.39 Aligned_cols=115 Identities=16% Similarity=0.127 Sum_probs=82.1
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDF 196 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~ 196 (397)
+.+.+.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...+ +++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 3456666666655556667889999999999999999986 6799999999999999999986543 699999998
Q ss_pred cccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHH----HHHHhccCCCc
Q 015990 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTD----VIKQLLPMGDI 243 (397)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~----il~~L~~~g~~ 243 (397)
.+.... .... ...+.+|+|+.+.+...... +...|.++|.+
T Consensus 126 ~~~~~~-----~~~~-~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~l 170 (225)
T 3tr6_A 126 KDTLAE-----LIHA-GQAWQYDLIYIDADKANTDLYYEESLKLLREGGLI 170 (225)
T ss_dssp HHHHHH-----HHTT-TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHH-----hhhc-cCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEE
Confidence 765211 0000 00157999999887543333 33445555544
No 152
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.00 E-value=3.5e-10 Score=107.27 Aligned_cols=89 Identities=16% Similarity=0.254 Sum_probs=72.4
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--C-CcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccchhhhhh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--G-ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~-~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~~~~~~ 206 (397)
.+...+++.++++|||+|||+|..|..+++. + .+|+|+|+|+.+++.+++++...+ +++++++|+.++....
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~--- 150 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL--- 150 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH---
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh---
Confidence 4455678889999999999999999999984 4 689999999999999999987554 8999999998764310
Q ss_pred hHHhhhcCCCCcceEeecCCCc
Q 015990 207 SLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.. ..+.+|.|++|+|+.
T Consensus 151 --~~---~~~~fD~Vl~d~Pcs 167 (274)
T 3ajd_A 151 --LK---NEIFFDKILLDAPCS 167 (274)
T ss_dssp --HH---TTCCEEEEEEEECCC
T ss_pred --hh---ccccCCEEEEcCCCC
Confidence 00 135799999999985
No 153
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.00 E-value=9.5e-10 Score=102.78 Aligned_cols=117 Identities=12% Similarity=0.070 Sum_probs=81.7
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDF 196 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~ 196 (397)
..+.+.....+...+...++.+|||||||+|+.+..+++. +++|+++|+|+++++.|++++... ++++++++|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 3456666655555555567789999999999999999986 679999999999999999998654 3799999999
Q ss_pred cccchhhhhhhHHhhhcCCCCcceEeecCCCcCcH----HHHHHhccCCCce
Q 015990 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST----DVIKQLLPMGDIF 244 (397)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s----~il~~L~~~g~~~ 244 (397)
.+.... +.......+.||+|+.+.+..... .+...|.++|.++
T Consensus 141 ~~~l~~-----l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv 187 (247)
T 1sui_A 141 LPVLDE-----MIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIG 187 (247)
T ss_dssp HHHHHH-----HHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEE
T ss_pred HHHHHH-----HHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEE
Confidence 775211 000000025799999886533222 3344555666543
No 154
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.00 E-value=7.8e-10 Score=104.03 Aligned_cols=102 Identities=24% Similarity=0.305 Sum_probs=78.1
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~ 205 (397)
.+.+.....+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++... ++++++.+|+.+.++.
T Consensus 26 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--- 102 (276)
T 3mgg_A 26 EKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFE--- 102 (276)
T ss_dssp HHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSC---
T ss_pred HHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCC---
Confidence 333444445678899999999999999999997 679999999999999999987654 4899999999987642
Q ss_pred hhHHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCc
Q 015990 206 LSLFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDI 243 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~ 243 (397)
.+.+|+|+++..++.. ..+.+.|.++|.+
T Consensus 103 ---------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l 138 (276)
T 3mgg_A 103 ---------DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTI 138 (276)
T ss_dssp ---------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEE
T ss_pred ---------CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEE
Confidence 3679999988665332 2344455666654
No 155
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.00 E-value=1.2e-09 Score=102.05 Aligned_cols=111 Identities=15% Similarity=0.177 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccc
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVK 198 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~ 198 (397)
+.+.....+...+...++.+|||||||+|..+..+++. +++|+++|+|+.+++.|++++... ++++++.+|+.+
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 45555555555556667889999999999999999997 679999999999999999998654 379999999977
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcCcHH----HHHHhccCCCce
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNISTD----VIKQLLPMGDIF 244 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~----il~~L~~~g~~~ 244 (397)
..... ...+.+|+|+.+.+.....+ +...|.++|.++
T Consensus 127 ~l~~~---------~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv 167 (248)
T 3tfw_A 127 SLESL---------GECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLII 167 (248)
T ss_dssp HHHTC---------CSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEE
T ss_pred HHHhc---------CCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEE
Confidence 42110 01247999998876543333 344556666544
No 156
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.00 E-value=1.2e-09 Score=102.67 Aligned_cols=91 Identities=25% Similarity=0.301 Sum_probs=72.1
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-C--CcEEEEeCCHH------HHHHHHHHhccC---CceEEEEcc
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G--ATVLAIEKDQH------MVGLVRERFASI---DQLKVLQED 195 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~--~~V~~vE~d~~------~i~~a~~~~~~~---~~v~ii~gD 195 (397)
.....+++.+.+.++.+|||||||+|.++..+++. + .+|+|+|+++. +++.|++++... ++++++.+|
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 34567788888889999999999999999999987 4 79999999997 999999998654 379999998
Q ss_pred -ccccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 196 -FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
....... ...+.+|+|+++.+++
T Consensus 110 ~~~~~~~~----------~~~~~fD~v~~~~~l~ 133 (275)
T 3bkx_A 110 NLSDDLGP----------IADQHFDRVVLAHSLW 133 (275)
T ss_dssp CTTTCCGG----------GTTCCCSEEEEESCGG
T ss_pred hhhhccCC----------CCCCCEEEEEEccchh
Confidence 3222211 0236799999987764
No 157
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.00 E-value=5.7e-10 Score=111.33 Aligned_cols=99 Identities=23% Similarity=0.253 Sum_probs=76.0
Q ss_pred ccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC---ceEEEEcccc
Q 015990 122 HYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFV 197 (397)
Q Consensus 122 nfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~ 197 (397)
.|..+......++..+ ..++++|||+|||+|.++..+++.++ +|+|+|+|+.+++.|++++..++ +++++++|+.
T Consensus 199 g~f~~~~~~~~~~~~~-~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~ 277 (396)
T 2as0_A 199 GFFLDQRENRLALEKW-VQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF 277 (396)
T ss_dssp CCCSTTHHHHHHHGGG-CCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CccCCHHHHHHHHHHH-hhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHH
Confidence 4555555555555443 24788999999999999999999854 89999999999999999987654 7999999998
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+.... +.. ....+|+|+.|+|+..
T Consensus 278 ~~~~~-----~~~---~~~~fD~Vi~dpP~~~ 301 (396)
T 2as0_A 278 EEMEK-----LQK---KGEKFDIVVLDPPAFV 301 (396)
T ss_dssp HHHHH-----HHH---TTCCEEEEEECCCCSC
T ss_pred HHHHH-----HHh---hCCCCCEEEECCCCCC
Confidence 76321 110 2357999999999843
No 158
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.00 E-value=1.6e-09 Score=99.60 Aligned_cols=109 Identities=15% Similarity=0.162 Sum_probs=77.1
Q ss_pred CCHHHHHHH---HHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC----CceEEEEc
Q 015990 125 LNSEINDQL---AAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI----DQLKVLQE 194 (397)
Q Consensus 125 ~~~~i~~~i---~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~----~~v~ii~g 194 (397)
+++.....+ +...+.+++.+|||||||+|+.|..+++. +++|++||+|+++++.|++++... ++++++++
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 445544433 33333334459999999999999999984 579999999999999999998653 37999999
Q ss_pred cccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcH----HHHHHhccCCCc
Q 015990 195 DFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST----DVIKQLLPMGDI 243 (397)
Q Consensus 195 D~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s----~il~~L~~~g~~ 243 (397)
|+.+.... ...+.||+|+.+.+..-.. .+.+.|.++|.+
T Consensus 117 da~~~l~~----------~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~l 159 (221)
T 3dr5_A 117 RPLDVMSR----------LANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGAL 159 (221)
T ss_dssp CHHHHGGG----------SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEE
T ss_pred CHHHHHHH----------hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEE
Confidence 99876321 0136799999987654333 334455555543
No 159
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.99 E-value=5.3e-10 Score=106.07 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=71.0
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccc
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCH 200 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~ 200 (397)
....+.+.+.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++... ..++.+..+|+.+++
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 45667777777767888999999999999999999999999999999999999987522 137889999998865
Q ss_pred hhhhhhhHHhhhcCCCCcceEeec
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVAN 224 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~N 224 (397)
.. + ...+.+|+|+++
T Consensus 123 ~~-----~----~~~~~fD~V~~~ 137 (293)
T 3thr_A 123 KD-----V----PAGDGFDAVICL 137 (293)
T ss_dssp HH-----S----CCTTCEEEEEEC
T ss_pred cc-----c----ccCCCeEEEEEc
Confidence 10 0 023679999875
No 160
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.99 E-value=1.8e-09 Score=102.14 Aligned_cols=101 Identities=15% Similarity=0.192 Sum_probs=76.9
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhhhh
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~~~ 207 (397)
..++..+... +.+|||||||+|.++..+++.+.+|+|+|+++.+++.|++++... ++++++++|+.+.+..
T Consensus 59 ~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----- 132 (285)
T 4htf_A 59 DRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH----- 132 (285)
T ss_dssp HHHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-----
T ss_pred HHHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-----
Confidence 3455555543 679999999999999999999999999999999999999998654 4799999999887521
Q ss_pred HHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCc
Q 015990 208 LFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDI 243 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~ 243 (397)
..+.+|+|+++-.++.. ..+.+.|.++|.+
T Consensus 133 ------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 169 (285)
T 4htf_A 133 ------LETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVL 169 (285)
T ss_dssp ------CSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEE
T ss_pred ------cCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEE
Confidence 23689999988665422 2344455566654
No 161
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.99 E-value=5e-10 Score=101.38 Aligned_cols=87 Identities=17% Similarity=0.276 Sum_probs=68.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHH
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
...+++.+...++.+|||||||+|.++..+++.+.+|+|+|+++.+++.++++ +++.++.+|+.+......
T Consensus 41 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~----- 111 (227)
T 3e8s_A 41 DQAILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA----GAGEVHLASYAQLAEAKV----- 111 (227)
T ss_dssp HHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT----CSSCEEECCHHHHHTTCS-----
T ss_pred cHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh----cccccchhhHHhhccccc-----
Confidence 34566666666778999999999999999999999999999999999999987 467888898877621100
Q ss_pred hhhcCCCCcceEeecCCCc
Q 015990 210 ERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy~ 228 (397)
.....+|+|+++..++
T Consensus 112 ---~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 112 ---PVGKDYDLICANFALL 127 (227)
T ss_dssp ---CCCCCEEEEEEESCCC
T ss_pred ---ccCCCccEEEECchhh
Confidence 0234599999987766
No 162
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.99 E-value=1.7e-09 Score=103.34 Aligned_cols=112 Identities=10% Similarity=0.045 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHH---cCCcEEEEeCCHHHHHHHHHHhccC----CceEEEEccccc
Q 015990 126 NSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLN---AGATVLAIEKDQHMVGLVRERFASI----DQLKVLQEDFVK 198 (397)
Q Consensus 126 ~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~---~~~~V~~vE~d~~~i~~a~~~~~~~----~~v~ii~gD~~~ 198 (397)
.+.+.+.+..... .++.+|||||||+|.++..+++ .+.+|+|+|+++.+++.|++++... ++++++++|+.+
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 4566666666544 5788999999999999999995 5779999999999999999987653 589999999998
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcCc------HHHHHHhccCCCce
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNIS------TDVIKQLLPMGDIF 244 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~------s~il~~L~~~g~~~ 244 (397)
+++.+.. . ...+.+|+|+++..++.. ..+.+.|.++|.++
T Consensus 101 ~~~~~~~--~----~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~ 146 (299)
T 3g5t_A 101 FKFLGAD--S----VDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIA 146 (299)
T ss_dssp CGGGCTT--T----TTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEE
T ss_pred CCccccc--c----ccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEE
Confidence 7653100 0 012579999998765433 23445566666553
No 163
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.99 E-value=1.1e-09 Score=102.26 Aligned_cols=73 Identities=19% Similarity=0.278 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcc
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d 219 (397)
.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|++++. +++++++|+.++++ .+.+|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~d~~~~~~-------------~~~fD 112 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP---DAVLHHGDMRDFSL-------------GRRFS 112 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT---TSEEEECCTTTCCC-------------SCCEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC---CCEEEECChHHCCc-------------cCCcC
Confidence 456899999999999999999999999999999999999999863 79999999998754 26799
Q ss_pred eEeecC-CCc
Q 015990 220 KVVANI-PFN 228 (397)
Q Consensus 220 ~Vv~Nl-Py~ 228 (397)
+|+++. .++
T Consensus 113 ~v~~~~~~l~ 122 (263)
T 3pfg_A 113 AVTCMFSSIG 122 (263)
T ss_dssp EEEECTTGGG
T ss_pred EEEEcCchhh
Confidence 999876 543
No 164
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.99 E-value=1.1e-09 Score=109.37 Aligned_cols=96 Identities=18% Similarity=0.211 Sum_probs=72.7
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccC---C-ceEEEEcccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI---D-QLKVLQEDFV 197 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~---~-~v~ii~gD~~ 197 (397)
|..+......++..+ .++++|||+|||+|.++..+++.+ .+|+|||+|+.+++.|++++..+ . +++++++|+.
T Consensus 204 ff~~~~~~~~~l~~~--~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~ 281 (396)
T 3c0k_A 204 YYLDQRDSRLATRRY--VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVF 281 (396)
T ss_dssp SCGGGHHHHHHHHHH--CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHH
T ss_pred cCcCHHHHHHHHHHh--hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHH
Confidence 333433334444444 577899999999999999999985 58999999999999999998643 2 7999999998
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
++... +.. ....+|+|+.|+|+.
T Consensus 282 ~~~~~-----~~~---~~~~fD~Ii~dpP~~ 304 (396)
T 3c0k_A 282 KLLRT-----YRD---RGEKFDVIVMDPPKF 304 (396)
T ss_dssp HHHHH-----HHH---TTCCEEEEEECCSST
T ss_pred HHHHH-----HHh---cCCCCCEEEECCCCC
Confidence 76321 110 135799999999984
No 165
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.99 E-value=9.8e-10 Score=101.48 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=74.3
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++. ..+++++++|+.+.+....+. ....+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~~~ 125 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT-AANISYRLLDGLVPEQAAQIH-------SEIGD 125 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC-CTTEEEEECCTTCHHHHHHHH-------HHHCS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc-ccCceEEECcccccccccccc-------cccCc
Confidence 4677899999999999999999998899999999999999999874 348999999999876532111 11247
Q ss_pred ceEeecCCCcCcH---------HHHHHhccCCCce
Q 015990 219 AKVVANIPFNIST---------DVIKQLLPMGDIF 244 (397)
Q Consensus 219 d~Vv~NlPy~i~s---------~il~~L~~~g~~~ 244 (397)
|+|+++..++... .+.+.|.++|.++
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 160 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMY 160 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEE
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 8888885544332 2445666777543
No 166
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.98 E-value=3.2e-10 Score=112.71 Aligned_cols=96 Identities=18% Similarity=0.159 Sum_probs=73.3
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCH 200 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~ 200 (397)
|..+......++. .. ++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..++ +++++++|+.++.
T Consensus 194 ~f~~~~~~~~~~~--~~-~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~ 270 (382)
T 1wxx_A 194 AYLDQRENRLYME--RF-RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL 270 (382)
T ss_dssp CCGGGHHHHHHGG--GC-CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH
T ss_pred cccchHHHHHHHH--hc-CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHH
Confidence 4444443333333 33 77899999999999999999987799999999999999999987654 6999999998763
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.. +.. ....+|+|+.|+|+..
T Consensus 271 ~~-----~~~---~~~~fD~Ii~dpP~~~ 291 (382)
T 1wxx_A 271 RR-----LEK---EGERFDLVVLDPPAFA 291 (382)
T ss_dssp HH-----HHH---TTCCEEEEEECCCCSC
T ss_pred HH-----HHh---cCCCeeEEEECCCCCC
Confidence 21 110 1357999999999843
No 167
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.98 E-value=2.9e-10 Score=107.21 Aligned_cols=89 Identities=16% Similarity=0.078 Sum_probs=67.8
Q ss_pred HHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCH-------HHHHHHHHHhccC---CceEEEEccccccchh
Q 015990 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQ-------HMVGLVRERFASI---DQLKVLQEDFVKCHIR 202 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~-------~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~ 202 (397)
+.+.+...++++|||+|||+|.++..+++.+++|+|+|+|+ ++++.|+++...+ ++++++++|+.++...
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~ 154 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA 154 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh
Confidence 33344555678999999999999999999999999999999 9999998876543 2599999999875210
Q ss_pred hhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+.. ....+|+|+.|+||..
T Consensus 155 -----~~~---~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 155 -----LVK---TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp -----HHH---HHCCCSEEEECCCC--
T ss_pred -----hhc---cCCCccEEEECCCCCC
Confidence 000 0147999999999854
No 168
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.97 E-value=1.4e-09 Score=95.83 Aligned_cols=79 Identities=22% Similarity=0.365 Sum_probs=65.7
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
.++..+ +.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.+++++ ++++++++|+.+.++.
T Consensus 38 ~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~---~~~~~~~~d~~~~~~~--------- 104 (195)
T 3cgg_A 38 RLIDAM-APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF---PEARWVVGDLSVDQIS--------- 104 (195)
T ss_dssp HHHHHH-SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTSEEEECCTTTSCCC---------
T ss_pred HHHHHh-ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC---CCCcEEEcccccCCCC---------
Confidence 344444 457889999999999999999999999999999999999999986 3689999999886532
Q ss_pred hcCCCCcceEeecCC
Q 015990 212 RKSSSGFAKVVANIP 226 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlP 226 (397)
.+.+|+|+++.+
T Consensus 105 ---~~~~D~i~~~~~ 116 (195)
T 3cgg_A 105 ---ETDFDLIVSAGN 116 (195)
T ss_dssp ---CCCEEEEEECCC
T ss_pred ---CCceeEEEECCc
Confidence 357999999843
No 169
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.97 E-value=1.7e-09 Score=99.11 Aligned_cols=83 Identities=13% Similarity=0.220 Sum_probs=68.1
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhH
Q 015990 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 130 ~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~ 208 (397)
.+.+++.+. ..++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++... +++++++|+.+..
T Consensus 30 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~--~v~~~~~d~~~~~-------- 99 (250)
T 2p7i_A 30 HPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD--GITYIHSRFEDAQ-------- 99 (250)
T ss_dssp HHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS--CEEEEESCGGGCC--------
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC--CeEEEEccHHHcC--------
Confidence 345555554 34677899999999999999999988999999999999999998754 7999999998762
Q ss_pred HhhhcCCCCcceEeecCCC
Q 015990 209 FERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~NlPy 227 (397)
..+.+|+|+++-..
T Consensus 100 -----~~~~fD~v~~~~~l 113 (250)
T 2p7i_A 100 -----LPRRYDNIVLTHVL 113 (250)
T ss_dssp -----CSSCEEEEEEESCG
T ss_pred -----cCCcccEEEEhhHH
Confidence 23579999887544
No 170
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.96 E-value=2.4e-09 Score=105.00 Aligned_cols=87 Identities=18% Similarity=0.234 Sum_probs=72.1
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~ 203 (397)
...+.|++.+...++.+|||||||+|.++..+++.+. +|+|||+++ +++.|+++++.+ ++++++.+|+.++++
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-- 113 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-- 113 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC--
Confidence 4456677777777889999999999999999999865 999999996 889999887644 479999999988753
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCc
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
++.+|+|+++.+++
T Consensus 114 -----------~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 114 -----------PEQVDIIISEPMGY 127 (348)
T ss_dssp -----------SSCEEEEEECCCBT
T ss_pred -----------CCceeEEEEeCchh
Confidence 25799999997743
No 171
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.96 E-value=5.8e-10 Score=103.56 Aligned_cols=107 Identities=8% Similarity=0.056 Sum_probs=75.7
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc------CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccc
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA------GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCH 200 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~------~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~ 200 (397)
+.....+.+.+...++++|||||||+|++|..|++. +++|+|||+++.+++.|+. . .++++++++|+.+..
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~--~~~v~~~~gD~~~~~ 143 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D--MENITLHQGDCSDLT 143 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G--CTTEEEEECCSSCSG
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c--CCceEEEECcchhHH
Confidence 777777777666566789999999999999999986 6799999999999988872 2 358999999998752
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcCcHH----HHH-HhccCCCce
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNISTD----VIK-QLLPMGDIF 244 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~----il~-~L~~~g~~~ 244 (397)
.-. . .....+|.|+.+........ +.+ .|.++|.++
T Consensus 144 ~l~----~----~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv 184 (236)
T 2bm8_A 144 TFE----H----LREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFI 184 (236)
T ss_dssp GGG----G----GSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEE
T ss_pred HHH----h----hccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEE
Confidence 100 0 01236899887655222222 232 566676553
No 172
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.96 E-value=2.1e-09 Score=110.10 Aligned_cols=84 Identities=18% Similarity=0.239 Sum_probs=69.9
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~ 205 (397)
.+.+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.|++++..+ ++++++++|+.++++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~---- 221 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL---- 221 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC----
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc----
Confidence 4456666666678899999999999999999885 4999999998 999999987654 479999999988643
Q ss_pred hhHHhhhcCCCCcceEeecCCC
Q 015990 206 LSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
.+.+|+|++|.+.
T Consensus 222 ---------~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 222 ---------PEQVDIIISEPMG 234 (480)
T ss_dssp ---------SSCEEEEECCCCH
T ss_pred ---------CCCeEEEEEeCch
Confidence 2579999999883
No 173
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.96 E-value=1.5e-09 Score=99.13 Aligned_cols=116 Identities=19% Similarity=0.192 Sum_probs=84.2
Q ss_pred ccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEcc
Q 015990 122 HYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQED 195 (397)
Q Consensus 122 nfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD 195 (397)
.+..++.....+...+...++.+|||||||+|.++..+++. +.+|+++|+|+.+++.|++++... ++++++++|
T Consensus 50 ~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d 129 (229)
T 2avd_A 50 DSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP 129 (229)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcC
Confidence 36777777777766666677889999999999999999985 579999999999999999998654 489999999
Q ss_pred ccccchhhhhhhHHhhhcCCCCcceEeecCCCcCcHH----HHHHhccCCCc
Q 015990 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTD----VIKQLLPMGDI 243 (397)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~----il~~L~~~g~~ 243 (397)
+.+.... +... ...+.+|+|+.+.|...... +...|.++|.+
T Consensus 130 ~~~~~~~-----~~~~-~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~l 175 (229)
T 2avd_A 130 ALETLDE-----LLAA-GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGIL 175 (229)
T ss_dssp HHHHHHH-----HHHT-TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHH-----HHhc-CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEE
Confidence 8764211 1000 00157999999988543333 33444455543
No 174
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.96 E-value=2.2e-09 Score=100.60 Aligned_cols=90 Identities=14% Similarity=0.255 Sum_probs=76.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++. +++.++.+|+.+.++. .+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~------------~~~ 148 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---PQVTFCVASSHRLPFS------------DTS 148 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---TTSEEEECCTTSCSBC------------TTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcchhhCCCC------------CCc
Confidence 56789999999999999999997 679999999999999999875 4789999999877542 357
Q ss_pred cceEeecCCCcCcHHHHHHhccCCCce
Q 015990 218 FAKVVANIPFNISTDVIKQLLPMGDIF 244 (397)
Q Consensus 218 ~d~Vv~NlPy~i~s~il~~L~~~g~~~ 244 (397)
+|+|+++........+.+.|.++|.++
T Consensus 149 fD~v~~~~~~~~l~~~~~~L~pgG~l~ 175 (269)
T 1p91_A 149 MDAIIRIYAPCKAEELARVVKPGGWVI 175 (269)
T ss_dssp EEEEEEESCCCCHHHHHHHEEEEEEEE
T ss_pred eeEEEEeCChhhHHHHHHhcCCCcEEE
Confidence 999998877777778888888887654
No 175
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.96 E-value=1.8e-09 Score=98.36 Aligned_cols=77 Identities=23% Similarity=0.302 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-------ceEEEEccccccchhhhhhhHHhhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-------QLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-------~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++....+ +++++.+|+.+.++.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---------- 98 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH---------- 98 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC----------
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC----------
Confidence 477899999999999999999999999999999999999999886532 589999999887642
Q ss_pred cCCCCcceEeecCCCc
Q 015990 213 KSSSGFAKVVANIPFN 228 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~ 228 (397)
.+.+|+|+++..++
T Consensus 99 --~~~~D~v~~~~~l~ 112 (235)
T 3sm3_A 99 --DSSFDFAVMQAFLT 112 (235)
T ss_dssp --TTCEEEEEEESCGG
T ss_pred --CCceeEEEEcchhh
Confidence 36799999886553
No 176
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.95 E-value=8.1e-10 Score=109.53 Aligned_cols=79 Identities=25% Similarity=0.330 Sum_probs=64.5
Q ss_pred HHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhH
Q 015990 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~ 208 (397)
|.......++++|||||||+|.++..+++.|+ +|+|||.++ +++.|+++++.++ +++++++|+.++.+
T Consensus 75 i~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l------- 146 (376)
T 4hc4_A 75 ILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL------- 146 (376)
T ss_dssp HHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-------
T ss_pred HHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC-------
Confidence 33333345788999999999999999999876 799999996 8899998877653 79999999998864
Q ss_pred HhhhcCCCCcceEeecC
Q 015990 209 FERRKSSSGFAKVVANI 225 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~Nl 225 (397)
++++|+||+++
T Consensus 147 ------pe~~DvivsE~ 157 (376)
T 4hc4_A 147 ------PEQVDAIVSEW 157 (376)
T ss_dssp ------SSCEEEEECCC
T ss_pred ------CccccEEEeec
Confidence 25799999864
No 177
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.94 E-value=1.7e-09 Score=104.27 Aligned_cols=95 Identities=15% Similarity=0.199 Sum_probs=71.1
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
...+.+|||||||+|.++..+++.. .+|++||+|+.+++.|++++.. .++++++.+|+.++-..
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-------- 164 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-------- 164 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT--------
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh--------
Confidence 3466899999999999999999873 6999999999999999998753 46899999999764211
Q ss_pred hhcCCCCcceEeecCCCcCc-----------HHHHHHhccCCCce
Q 015990 211 RRKSSSGFAKVVANIPFNIS-----------TDVIKQLLPMGDIF 244 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy~i~-----------s~il~~L~~~g~~~ 244 (397)
..+.+|+|++|+|..+. ..+.+.|.++|.++
T Consensus 165 ---~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv 206 (304)
T 2o07_A 165 ---NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLC 206 (304)
T ss_dssp ---CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEE
T ss_pred ---CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEE
Confidence 23679999999886432 23345566666554
No 178
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.94 E-value=1.8e-09 Score=104.12 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHh---cCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhc------cCCceEEEE
Q 015990 125 LNSEINDQLAAAA---AVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA------SIDQLKVLQ 193 (397)
Q Consensus 125 ~~~~i~~~i~~~~---~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~------~~~~v~ii~ 193 (397)
.++..+..++..+ ...++.+|||||||+|.++..+++. ..+|++||+|+.+++.|++++. ..++++++.
T Consensus 76 ~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~ 155 (304)
T 3bwc_A 76 YDEFVYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV 155 (304)
T ss_dssp TTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE
T ss_pred ccchHHHHHHhhhhhhcCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE
Confidence 3455555554433 2356789999999999999999987 4699999999999999999873 235899999
Q ss_pred ccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 194 gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+|+.++.... ..+.+|+|++|.+...
T Consensus 156 ~D~~~~~~~~----------~~~~fDvIi~d~~~~~ 181 (304)
T 3bwc_A 156 GDGLAFVRQT----------PDNTYDVVIIDTTDPA 181 (304)
T ss_dssp SCHHHHHHSS----------CTTCEEEEEEECC---
T ss_pred CcHHHHHHhc----------cCCceeEEEECCCCcc
Confidence 9998764210 1357999999987644
No 179
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.94 E-value=2.4e-09 Score=96.75 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccc
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVK 198 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~ 198 (397)
.++.....+...+...++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|++++... ++++++++|+.+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 44444444433344446789999999999999999986 679999999999999999987643 369999999976
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcCcHHHHH
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIK 235 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~ 235 (397)
.... ..+ +|+|+.+.+..-...++.
T Consensus 120 ~~~~-----------~~~-fD~v~~~~~~~~~~~~l~ 144 (210)
T 3c3p_A 120 IAAG-----------QRD-IDILFMDCDVFNGADVLE 144 (210)
T ss_dssp HHTT-----------CCS-EEEEEEETTTSCHHHHHH
T ss_pred Hhcc-----------CCC-CCEEEEcCChhhhHHHHH
Confidence 4211 124 999998866443344443
No 180
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.93 E-value=9.6e-10 Score=103.61 Aligned_cols=89 Identities=17% Similarity=0.259 Sum_probs=70.2
Q ss_pred HHHHHHhcCCCC--CEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc----------C-CceEEEEcccc
Q 015990 131 DQLAAAAAVQEG--DIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS----------I-DQLKVLQEDFV 197 (397)
Q Consensus 131 ~~i~~~~~~~~~--~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~----------~-~~v~ii~gD~~ 197 (397)
+.+.+.+.+.++ ++|||+|||+|..+..++.+|++|++||+++.+++.++++++. . .+++++++|+.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 356667777777 8999999999999999999999999999999987777665431 1 36999999998
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
++... ..+.||+|+.||||...
T Consensus 156 ~~L~~-----------~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 156 TALTD-----------ITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp HHSTT-----------CSSCCSEEEECCCCCCC
T ss_pred HHHHh-----------CcccCCEEEEcCCCCCc
Confidence 75211 12369999999999653
No 181
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.93 E-value=1.5e-09 Score=97.95 Aligned_cols=81 Identities=20% Similarity=0.237 Sum_probs=66.4
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhH
Q 015990 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 129 i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~ 208 (397)
.+..++.. +.++.+|||||||+|.++..+++.+.+|+|+|+++.+++.+++++ +++++.+|+.+.+.
T Consensus 33 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~d~~~~~~------- 99 (211)
T 3e23_A 33 TLTKFLGE--LPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----GRPVRTMLFHQLDA------- 99 (211)
T ss_dssp HHHHHHTT--SCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TSCCEECCGGGCCC-------
T ss_pred HHHHHHHh--cCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----CCceEEeeeccCCC-------
Confidence 34444443 346789999999999999999999999999999999999999987 57788999988752
Q ss_pred HhhhcCCCCcceEeecCCCc
Q 015990 209 FERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.+.+|+|+++..++
T Consensus 100 ------~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 100 ------IDAYDAVWAHACLL 113 (211)
T ss_dssp ------CSCEEEEEECSCGG
T ss_pred ------CCcEEEEEecCchh
Confidence 26799999986653
No 182
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.93 E-value=1.5e-09 Score=100.69 Aligned_cols=79 Identities=19% Similarity=0.221 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhc--------cCCceEEEEccccc-cchhhhhhh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA--------SIDQLKVLQEDFVK-CHIRSHMLS 207 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~--------~~~~v~ii~gD~~~-~~~~~~~~~ 207 (397)
..++.+|||||||+|.++..|++. +.+|+|||+++.|++.|++++. ...|++++++|+.+ ++.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~------ 117 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPN------ 117 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHH------
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhh------
Confidence 345678999999999999999987 4689999999999999987753 23589999999987 321
Q ss_pred HHhhhcCCCCcceEeecCCC
Q 015990 208 LFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy 227 (397)
. ...+.+|.|+.+.|-
T Consensus 118 ~----~~~~~~D~v~~~~~d 133 (235)
T 3ckk_A 118 F----FYKGQLTKMFFLFPD 133 (235)
T ss_dssp H----CCTTCEEEEEEESCC
T ss_pred h----CCCcCeeEEEEeCCC
Confidence 0 023578999888653
No 183
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.93 E-value=1.8e-09 Score=102.61 Aligned_cols=94 Identities=15% Similarity=0.226 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
..+.+|||||||+|.++..+++. + .+|++||+|+.+++.|++++.. .++++++.+|+.++-..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--------- 144 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK--------- 144 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT---------
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh---------
Confidence 35679999999999999999987 3 6999999999999999998731 35899999999764211
Q ss_pred hcCCCCcceEeecCCCcCc-------H----HHHHHhccCCCce
Q 015990 212 RKSSSGFAKVVANIPFNIS-------T----DVIKQLLPMGDIF 244 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i~-------s----~il~~L~~~g~~~ 244 (397)
..+.+|+|++|+|+... . .+.+.|.++|.++
T Consensus 145 --~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv 186 (275)
T 1iy9_A 145 --SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFV 186 (275)
T ss_dssp --CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEE
T ss_pred --CCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEE
Confidence 23679999999987432 2 3445566666543
No 184
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.93 E-value=1.9e-09 Score=103.33 Aligned_cols=80 Identities=18% Similarity=0.125 Sum_probs=67.1
Q ss_pred hcCCCCCEEEEEcCcccHHHHHHH--Hc-CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHh
Q 015990 137 AAVQEGDIVLEIGPGTGSLTNVLL--NA-GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 137 ~~~~~~~~VLEIG~G~G~lt~~La--~~-~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
..+.++.+|||||||+|.++..++ .. +.+|+|+|+|+.+++.|++++...+ +++++++|+.+.++
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------- 184 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--------- 184 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC---------
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc---------
Confidence 346788999999999999999985 22 6699999999999999999987643 59999999998754
Q ss_pred hhcCCCCcceEeecCCCcC
Q 015990 211 RRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy~i 229 (397)
. +.+|+|+++.+++.
T Consensus 185 ---~-~~fD~v~~~~~~~~ 199 (305)
T 3ocj_A 185 ---R-EGYDLLTSNGLNIY 199 (305)
T ss_dssp ---C-SCEEEEECCSSGGG
T ss_pred ---c-CCeEEEEECChhhh
Confidence 2 67999999887653
No 185
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.93 E-value=2.5e-09 Score=104.09 Aligned_cols=102 Identities=20% Similarity=0.338 Sum_probs=77.3
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~ 205 (397)
.+.|.+.+...++.+|||||||+|.++..+++.+. +|+|+|++ .+++.|++++..+ ++++++++|+.++++.
T Consensus 27 ~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~--- 102 (328)
T 1g6q_1 27 RNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLP--- 102 (328)
T ss_dssp HHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCS---
T ss_pred HHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCC---
Confidence 34555555556788999999999999999999865 89999999 6999999987654 3799999999987542
Q ss_pred hhHHhhhcCCCCcceEeecCCCcC------cHHHH----HHhccCCCce
Q 015990 206 LSLFERRKSSSGFAKVVANIPFNI------STDVI----KQLLPMGDIF 244 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~i------~s~il----~~L~~~g~~~ 244 (397)
.+.+|+|+++++.+. ...++ +.|.++|.++
T Consensus 103 ---------~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 103 ---------FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ---------SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ---------CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 257999999977432 12333 4566777654
No 186
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.92 E-value=2.4e-09 Score=98.89 Aligned_cols=121 Identities=13% Similarity=0.101 Sum_probs=84.7
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDF 196 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~ 196 (397)
....+.....+...+...++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|++++...+ +++++.+|+
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 4677888888888777778899999999999999999987 5799999999999999999986543 599999998
Q ss_pred cccchhhhh----hhHHhhhcC-C-CCcceEeecCCCcCc----HHHHHHhccCCCce
Q 015990 197 VKCHIRSHM----LSLFERRKS-S-SGFAKVVANIPFNIS----TDVIKQLLPMGDIF 244 (397)
Q Consensus 197 ~~~~~~~~~----~~~~~~~~~-~-~~~d~Vv~NlPy~i~----s~il~~L~~~g~~~ 244 (397)
.+....... ..|... .. . +.+|+|+.+...... ..+...|.++|.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~-f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv 178 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASD-FAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLI 178 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTT-TCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHhhccccccccc-ccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 764211000 000000 01 1 579999988654322 23444555665543
No 187
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.92 E-value=2.6e-09 Score=103.38 Aligned_cols=79 Identities=15% Similarity=0.246 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc-------CCceEEEEccccccchhhhhhhHHh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS-------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~-------~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
..+.+|||||||+|.++..+++. +.+|++||+|+.+++.|++++.. .++++++.+|+.++...
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-------- 147 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-------- 147 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH--------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh--------
Confidence 45689999999999999999987 56999999999999999998742 35899999999875211
Q ss_pred hhcCCCCcceEeecCCCcC
Q 015990 211 RRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy~i 229 (397)
..+.+|+|++|++...
T Consensus 148 ---~~~~fD~Ii~d~~~~~ 163 (314)
T 1uir_A 148 ---TEERYDVVIIDLTDPV 163 (314)
T ss_dssp ---CCCCEEEEEEECCCCB
T ss_pred ---cCCCccEEEECCCCcc
Confidence 2367999999988765
No 188
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.92 E-value=1.1e-09 Score=99.52 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=56.4
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHH----hcc--CCceEEEEccccccch
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRER----FAS--IDQLKVLQEDFVKCHI 201 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~----~~~--~~~v~ii~gD~~~~~~ 201 (397)
..++.+.+.++.+|||||||+|.++..+++. +.+|+|||+++.|++.+.++ ... .++++++++|+.++++
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~ 95 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPP 95 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCS
T ss_pred HHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCC
Confidence 4455666788899999999999999999998 67999999999988854322 222 2389999999998764
No 189
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.92 E-value=1.7e-09 Score=107.50 Aligned_cols=100 Identities=18% Similarity=0.259 Sum_probs=75.2
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC----------CceEEEEccccccchhhhh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI----------DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~----------~~v~ii~gD~~~~~~~~~~ 205 (397)
+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.|++++... ++++++++|+.++......
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999999985 459999999999999999986421 5899999999886210000
Q ss_pred hhHHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 206 LSLFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
. ...+.+|+|++|..++.. ..+.+.|+++|.++
T Consensus 161 -~-----~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~ 200 (383)
T 4fsd_A 161 -G-----VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELY 200 (383)
T ss_dssp -C-----CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred -C-----CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEE
Confidence 0 023689999999877654 34556677777654
No 190
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.92 E-value=5.7e-10 Score=113.30 Aligned_cols=96 Identities=18% Similarity=0.193 Sum_probs=75.8
Q ss_pred CCccCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC--ceEEEEc
Q 015990 120 GQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID--QLKVLQE 194 (397)
Q Consensus 120 GQnfl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~g 194 (397)
|.-++.|+ ....+...+++.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++...+ ++.++++
T Consensus 85 G~~~vQd~-ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~ 163 (456)
T 3m4x_A 85 GYEYSQEP-SAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH 163 (456)
T ss_dssp TSCEECCT-TTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC
T ss_pred CcEEEECH-HHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 44333333 3345566678889999999999999999999985 3589999999999999999987543 7999999
Q ss_pred cccccchhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 195 DFVKCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 195 D~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
|+.++... ..+.||+|+.|+|+
T Consensus 164 Da~~l~~~-----------~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 164 APAELVPH-----------FSGFFDRIVVDAPC 185 (456)
T ss_dssp CHHHHHHH-----------HTTCEEEEEEECCC
T ss_pred CHHHhhhh-----------ccccCCEEEECCCC
Confidence 99876421 12579999999996
No 191
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.91 E-value=1.5e-09 Score=100.49 Aligned_cols=78 Identities=9% Similarity=0.138 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHH--cCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLN--AGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~--~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.++.+|||||||+|.++..++. .+.+|+|||+|+.+++.|+++.... .+++++++|+.++..... ..
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~---------~~ 139 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKD---------VR 139 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTT---------TT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccccc---------cc
Confidence 4678999999999999999995 4679999999999999999987643 379999999987653100 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+.||+|+++..
T Consensus 140 ~~fD~V~~~~~ 150 (240)
T 1xdz_A 140 ESYDIVTARAV 150 (240)
T ss_dssp TCEEEEEEECC
T ss_pred CCccEEEEecc
Confidence 57999998763
No 192
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.91 E-value=5e-09 Score=96.09 Aligned_cols=83 Identities=16% Similarity=0.247 Sum_probs=68.1
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~ 205 (397)
....+.+.+.+. ++.+|||+|||+|.++..+++. .+|+|+|+++.+++.|+++.... .+++++++|+.+.+.
T Consensus 21 ~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---- 93 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELEL---- 93 (243)
T ss_dssp HHHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCC----
T ss_pred HHHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCC----
Confidence 345566666654 5689999999999999999988 89999999999999999987644 379999999988753
Q ss_pred hhHHhhhcCCCCcceEeecC
Q 015990 206 LSLFERRKSSSGFAKVVANI 225 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~Nl 225 (397)
.+.+|+|+++.
T Consensus 94 ---------~~~fD~v~~~~ 104 (243)
T 3d2l_A 94 ---------PEPVDAITILC 104 (243)
T ss_dssp ---------SSCEEEEEECT
T ss_pred ---------CCCcCEEEEeC
Confidence 25789998864
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.91 E-value=1.6e-09 Score=103.97 Aligned_cols=77 Identities=19% Similarity=0.289 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc-------CCceEEEEccccccchhhhhhhHHh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS-------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~-------~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
.++.+|||||||+|.++..+++. ..+|++||+|+++++.|++++.. .++++++.+|+.++...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-------- 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ-------- 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--------
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--------
Confidence 45689999999999999999987 46899999999999999998642 34899999999876321
Q ss_pred hhcCCCCcceEeecCCC
Q 015990 211 RRKSSSGFAKVVANIPF 227 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy 227 (397)
..+.+|+|++|+|.
T Consensus 154 ---~~~~fDvIi~D~~~ 167 (294)
T 3adn_A 154 ---TSQTFDVIISDCTD 167 (294)
T ss_dssp ---CCCCEEEEEECC--
T ss_pred ---cCCCccEEEECCCC
Confidence 23679999998764
No 194
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.91 E-value=2.4e-09 Score=96.14 Aligned_cols=85 Identities=14% Similarity=0.216 Sum_probs=68.2
Q ss_pred HHHHHHHHHhcCC---CCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccc
Q 015990 128 EINDQLAAAAAVQ---EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCH 200 (397)
Q Consensus 128 ~i~~~i~~~~~~~---~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~ 200 (397)
.+.+.+++.+... ++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.+++++...+ +++++++|+.+..
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC
Confidence 3455666655432 4789999999999999999986 6799999999999999999876543 6999999998764
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecC
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANI 225 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~Nl 225 (397)
. .+.+|+|++|.
T Consensus 129 ~-------------~~~~D~i~~~~ 140 (207)
T 1jsx_A 129 S-------------EPPFDGVISRA 140 (207)
T ss_dssp C-------------CSCEEEEECSC
T ss_pred c-------------cCCcCEEEEec
Confidence 2 25789999874
No 195
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.91 E-value=6.3e-10 Score=103.69 Aligned_cols=116 Identities=14% Similarity=0.116 Sum_probs=84.6
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDF 196 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~ 196 (397)
+.+.+.....+...+...++.+|||||||+|+.|..+++. +++|++||+++++++.|++++... ++++++++|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4567777777766666667889999999999999999984 579999999999999999998654 3899999999
Q ss_pred cccchhhhhhhHHhhhcCCCCcceEeecCCCcCcH----HHHHHhccCCCce
Q 015990 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIST----DVIKQLLPMGDIF 244 (397)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s----~il~~L~~~g~~~ 244 (397)
.+.... .... ...+.||+|+.+.+..-.. .+...|.++|.++
T Consensus 122 ~~~l~~-----~~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv 167 (242)
T 3r3h_A 122 LDTLHS-----LLNE-GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIA 167 (242)
T ss_dssp HHHHHH-----HHHH-HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHH-----Hhhc-cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEE
Confidence 775321 0000 0136799999987743322 3444556666543
No 196
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.91 E-value=1e-09 Score=109.70 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=66.7
Q ss_pred CCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC----CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI----DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~----~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
++.+|||+|||+|..+..+++.+.+|++||+|+.+++.|++|+..+ .+++++++|+.++-.. . ...
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~------~----~~~ 162 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL------I----KTF 162 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH------H----HHH
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh------c----cCC
Confidence 4789999999999999999999999999999999999999998743 4899999999885210 0 014
Q ss_pred CcceEeecCCCcCc
Q 015990 217 GFAKVVANIPFNIS 230 (397)
Q Consensus 217 ~~d~Vv~NlPy~i~ 230 (397)
.||+|+.||||.-.
T Consensus 163 ~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 163 HPDYIYVDPARRSG 176 (410)
T ss_dssp CCSEEEECCEEC--
T ss_pred CceEEEECCCCcCC
Confidence 79999999999753
No 197
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.90 E-value=3.1e-09 Score=97.98 Aligned_cols=101 Identities=13% Similarity=0.211 Sum_probs=73.8
Q ss_pred HHHHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhh
Q 015990 128 EINDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 128 ~i~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~ 206 (397)
.+.+.+...+. +.++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++ ++++.+|+.+....
T Consensus 27 ~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~------~~~~~~d~~~~~~~---- 96 (240)
T 3dli_A 27 LVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK------FNVVKSDAIEYLKS---- 96 (240)
T ss_dssp HHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT------SEEECSCHHHHHHT----
T ss_pred HHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh------cceeeccHHHHhhh----
Confidence 34445544443 45678999999999999999999999999999999999999876 77889998775211
Q ss_pred hHHhhhcCCCCcceEeecCCCc-Cc--------HHHHHHhccCCCce
Q 015990 207 SLFERRKSSSGFAKVVANIPFN-IS--------TDVIKQLLPMGDIF 244 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~-i~--------s~il~~L~~~g~~~ 244 (397)
...+.+|+|+++-.++ +. ..+.+.|+++|.++
T Consensus 97 ------~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (240)
T 3dli_A 97 ------LPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIV 137 (240)
T ss_dssp ------SCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEE
T ss_pred ------cCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEE
Confidence 0236799999875442 22 23445666777654
No 198
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.90 E-value=4.2e-09 Score=94.21 Aligned_cols=82 Identities=15% Similarity=0.232 Sum_probs=66.7
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhhhhHH
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
..++..+ .++ +|||||||+|.++..+++.+.+|+|+|+++.+++.|+++....+ +++++.+|+.+.++.
T Consensus 22 ~~~~~~~--~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~------- 91 (202)
T 2kw5_A 22 VSVANQI--PQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIV------- 91 (202)
T ss_dssp HHHHHHS--CSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCC-------
T ss_pred HHHHHhC--CCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCC-------
Confidence 3444443 455 99999999999999999998999999999999999999876433 799999999887542
Q ss_pred hhhcCCCCcceEeecCCC
Q 015990 210 ERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy 227 (397)
.+.+|+|+++..+
T Consensus 92 -----~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 92 -----ADAWEGIVSIFCH 104 (202)
T ss_dssp -----TTTCSEEEEECCC
T ss_pred -----cCCccEEEEEhhc
Confidence 3579999987643
No 199
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.90 E-value=1.3e-09 Score=111.55 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=75.5
Q ss_pred CCccCCCHHHHHHHHHHhcCC--CCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC--CceEEE
Q 015990 120 GQHYMLNSEINDQLAAAAAVQ--EGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI--DQLKVL 192 (397)
Q Consensus 120 GQnfl~~~~i~~~i~~~~~~~--~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii 192 (397)
|.-++.|+ ....+...+.+. ++++|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++... .+++++
T Consensus 95 G~~~~Qd~-~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~ 173 (479)
T 2frx_A 95 GLFYIQEA-SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALT 173 (479)
T ss_dssp TSEEECCH-HHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEE
T ss_pred cEEEEECH-HHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE
Confidence 44334443 223445566777 8999999999999999999986 368999999999999999998653 489999
Q ss_pred EccccccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 193 QEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 193 ~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
++|+.+++.. ..+.||+|++|+|+.
T Consensus 174 ~~D~~~~~~~-----------~~~~fD~Il~D~PcS 198 (479)
T 2frx_A 174 HFDGRVFGAA-----------VPEMFDAILLDAPCS 198 (479)
T ss_dssp CCCSTTHHHH-----------STTCEEEEEEECCCC
T ss_pred eCCHHHhhhh-----------ccccCCEEEECCCcC
Confidence 9999876421 125799999999974
No 200
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.90 E-value=6.8e-10 Score=102.35 Aligned_cols=78 Identities=9% Similarity=0.111 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCC-HHHHHHH---HHHhccC--CceEEEEccccccchhhhhhhHHhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKD-QHMVGLV---RERFASI--DQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d-~~~i~~a---~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
.++++|||||||+|.++..+++. +.+|+|||++ +.|++.| +++.... ++++++++|+.+++..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~--------- 93 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE--------- 93 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG---------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh---------
Confidence 57789999999999999999953 6789999999 7777666 6665443 4899999999988531
Q ss_pred hcCCCCcceEeecCCCc
Q 015990 212 RKSSSGFAKVVANIPFN 228 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~ 228 (397)
..+.++.|..|+|+.
T Consensus 94 --~~d~v~~i~~~~~~~ 108 (225)
T 3p2e_A 94 --LKNIADSISILFPWG 108 (225)
T ss_dssp --GTTCEEEEEEESCCH
T ss_pred --ccCeEEEEEEeCCCc
Confidence 114567788888864
No 201
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.90 E-value=4.5e-09 Score=112.36 Aligned_cols=93 Identities=15% Similarity=0.176 Sum_probs=72.5
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC----ceEEEEccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID----QLKVLQEDFVK 198 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~----~v~ii~gD~~~ 198 (397)
..|....+.++... .++++|||+|||+|.++..++..|+ +|++||+|+.+++.|++|+..++ +++++++|+.+
T Consensus 524 f~d~r~~r~~l~~~--~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~ 601 (703)
T 3v97_A 524 FLDHRIARRMLGQM--SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 601 (703)
T ss_dssp CGGGHHHHHHHHHH--CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH
T ss_pred cccHHHHHHHHHHh--cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH
Confidence 34444444444433 3678999999999999999998876 59999999999999999987553 69999999987
Q ss_pred cchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 199 CHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
+... ..+.||+|+.|+|+..
T Consensus 602 ~l~~-----------~~~~fD~Ii~DPP~f~ 621 (703)
T 3v97_A 602 WLRE-----------ANEQFDLIFIDPPTFS 621 (703)
T ss_dssp HHHH-----------CCCCEEEEEECCCSBC
T ss_pred HHHh-----------cCCCccEEEECCcccc
Confidence 5211 2367999999999843
No 202
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.89 E-value=3.7e-09 Score=97.79 Aligned_cols=85 Identities=14% Similarity=0.199 Sum_probs=66.4
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhc
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
+.++++|+|||||+|+++..+++.+ .+|+|+|+|+.+++.|++|+..++ +++++.+|.++....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~----------- 87 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE----------- 87 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-----------
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc-----------
Confidence 3467899999999999999999975 379999999999999999987654 699999999886431
Q ss_pred CCCCcceE-eecCCCcCcHHHHH
Q 015990 214 SSSGFAKV-VANIPFNISTDVIK 235 (397)
Q Consensus 214 ~~~~~d~V-v~NlPy~i~s~il~ 235 (397)
.+.+|.| ++|+--....+|+.
T Consensus 88 -~~~~D~IviaGmGg~lI~~IL~ 109 (230)
T 3lec_A 88 -ADNIDTITICGMGGRLIADILN 109 (230)
T ss_dssp -GGCCCEEEEEEECHHHHHHHHH
T ss_pred -ccccCEEEEeCCchHHHHHHHH
Confidence 1257864 57765444444444
No 203
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.89 E-value=5.4e-09 Score=96.86 Aligned_cols=99 Identities=10% Similarity=0.080 Sum_probs=73.0
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEcccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFV 197 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~ 197 (397)
.+.+.....+...+...++.+|||||||+|+.+..+++. +.+|+++|+|+++++.|++++...+ +++++++|+.
T Consensus 53 ~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~ 132 (237)
T 3c3y_A 53 STSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAM 132 (237)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 345665555555555567789999999999999999986 6799999999999999999986543 6999999998
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
+.... +.......+.||+|+.+.+-
T Consensus 133 ~~l~~-----l~~~~~~~~~fD~I~~d~~~ 157 (237)
T 3c3y_A 133 LALDN-----LLQGQESEGSYDFGFVDADK 157 (237)
T ss_dssp HHHHH-----HHHSTTCTTCEEEEEECSCG
T ss_pred HHHHH-----HHhccCCCCCcCEEEECCch
Confidence 75211 10000002579999988654
No 204
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.89 E-value=4.8e-09 Score=97.86 Aligned_cols=62 Identities=13% Similarity=0.124 Sum_probs=54.7
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccc
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCH 200 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~ 200 (397)
+.++++|||||||+|+++..+++.+ .+|+|+|+|+.+++.|++|+..++ ++++..+|.++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~ 85 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI 85 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc
Confidence 3467899999999999999999975 389999999999999999987654 6999999998764
No 205
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.88 E-value=2e-09 Score=99.39 Aligned_cols=75 Identities=11% Similarity=0.104 Sum_probs=62.9
Q ss_pred CCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
++.+|||||||+|.++..+++.+ .+|+|+|+++.+++.|++++... .+++++.+|+.+.++. .+.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~------------~~~ 146 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPE------------PDS 146 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCC------------SSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCC------------CCC
Confidence 57899999999999999998874 59999999999999999998654 3789999998877542 257
Q ss_pred cceEeecCCC
Q 015990 218 FAKVVANIPF 227 (397)
Q Consensus 218 ~d~Vv~NlPy 227 (397)
+|+|+++-.+
T Consensus 147 fD~v~~~~~l 156 (241)
T 2ex4_A 147 YDVIWIQWVI 156 (241)
T ss_dssp EEEEEEESCG
T ss_pred EEEEEEcchh
Confidence 9999888543
No 206
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.87 E-value=3.4e-09 Score=103.02 Aligned_cols=76 Identities=18% Similarity=0.267 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
.++.+|||||||+|.++..+++. +.+|+++|+|+.+++.|++++.. .++++++.+|+.+....
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~--------- 185 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN--------- 185 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH---------
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh---------
Confidence 45689999999999999999987 46999999999999999999764 35899999998764211
Q ss_pred hcCCCCcceEeecCC
Q 015990 212 RKSSSGFAKVVANIP 226 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlP 226 (397)
..+.+|+|++|++
T Consensus 186 --~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 186 --VTNTYDVIIVDSS 198 (321)
T ss_dssp --CCSCEEEEEEECC
T ss_pred --cCCCceEEEECCc
Confidence 2357999999984
No 207
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.87 E-value=4.8e-09 Score=112.14 Aligned_cols=96 Identities=13% Similarity=0.164 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC----------------------------------------
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---------------------------------------- 163 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~---------------------------------------- 163 (397)
.+.+.++..|+..+...++..|||.+||+|++.+.++..+
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3568999999999998889999999999999998877642
Q ss_pred ----CcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 164 ----ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 164 ----~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.+|+|+|+|+.+++.|++|+...+ .+++.++|+.++.... ..+.+|+||+||||..
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~----------~~~~~d~Iv~NPPYG~ 315 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL----------PKGPYGTVLSNPPYGE 315 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC----------TTCCCCEEEECCCCCC
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc----------ccCCCCEEEeCCCccc
Confidence 479999999999999999987654 5999999999874220 1127899999999964
No 208
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.87 E-value=4.2e-09 Score=97.88 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhcc----------CCceEEEEccccccchhhhhh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFAS----------IDQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~----------~~~v~ii~gD~~~~~~~~~~~ 206 (397)
+.++.+|||||||+|.++..+++.+ .+|+|||+++.+++.|++++.. .+|++++.+|+.+... ..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~-~~-- 123 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLP-NF-- 123 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGG-GT--
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHH-Hh--
Confidence 3467899999999999999999975 4799999999999999887643 2589999999987311 00
Q ss_pred hHHhhhcCCCCcceEeecCCC
Q 015990 207 SLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy 227 (397)
...+.+|.|+.+.|.
T Consensus 124 ------~~~~~~d~v~~~~p~ 138 (246)
T 2vdv_E 124 ------FEKGQLSKMFFCFPD 138 (246)
T ss_dssp ------SCTTCEEEEEEESCC
T ss_pred ------ccccccCEEEEECCC
Confidence 023567888777554
No 209
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.87 E-value=3e-09 Score=95.35 Aligned_cols=100 Identities=10% Similarity=0.062 Sum_probs=70.7
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~ 204 (397)
.++..+...+ .++++|||+|||+|.++..++.. +.+|+|+|+|++|++.+++++...+ ..++..+|.....
T Consensus 38 ~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~---- 111 (200)
T 3fzg_A 38 DFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDV---- 111 (200)
T ss_dssp HHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHH----
T ss_pred HHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccC----
Confidence 4566666666 45779999999999999999775 5699999999999999999987654 2233336654432
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCcH-------HHHHHhccCCC
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNIST-------DVIKQLLPMGD 242 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~s-------~il~~L~~~g~ 242 (397)
.++.+|+|+++.-++... .++..|.++|.
T Consensus 112 ---------~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggv 147 (200)
T 3fzg_A 112 ---------YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNF 147 (200)
T ss_dssp ---------TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEE
T ss_pred ---------CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCE
Confidence 236789999886554332 34555555543
No 210
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.87 E-value=7.9e-09 Score=93.01 Aligned_cols=94 Identities=18% Similarity=0.223 Sum_probs=70.8
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
.++..+.. ++.+|||+|||+|.++..+ +. +|+|+|+++.+++.++++. ++++++++|+.+.++.
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~-------- 92 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---PEATWVRAWGEALPFP-------- 92 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---TTSEEECCCTTSCCSC--------
T ss_pred HHHHHhcC-CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcccccCCCC--------
Confidence 34444333 7789999999999999888 66 9999999999999999987 5789999999887542
Q ss_pred hhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 211 RRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
.+.+|+|+++..++.. ..+.+.|.++|.++
T Consensus 93 ----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 129 (211)
T 2gs9_A 93 ----GESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALV 129 (211)
T ss_dssp ----SSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEE
T ss_pred ----CCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEE
Confidence 3579999988665432 23444556666553
No 211
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.87 E-value=1.1e-08 Score=96.77 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=66.0
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhhhhHHhhhcC
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
+.++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|++++... .+++++++|+.+.++. .
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 130 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-----------L 130 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-----------C
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-----------C
Confidence 56788999999999999999988865 9999999999999999998754 3699999999887541 1
Q ss_pred CCCcceEeecCCCc
Q 015990 215 SSGFAKVVANIPFN 228 (397)
Q Consensus 215 ~~~~d~Vv~NlPy~ 228 (397)
.+.+|+|+++...+
T Consensus 131 ~~~fD~v~~~~~l~ 144 (298)
T 1ri5_A 131 GKEFDVISSQFSFH 144 (298)
T ss_dssp SSCEEEEEEESCGG
T ss_pred CCCcCEEEECchhh
Confidence 35799999886543
No 212
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.87 E-value=7.9e-09 Score=96.59 Aligned_cols=88 Identities=23% Similarity=0.352 Sum_probs=68.2
Q ss_pred CCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcce
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~ 220 (397)
++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++.. ++ ++.+|+.++++. .+.+|.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~--~~--~~~~d~~~~~~~------------~~~fD~ 117 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV--KN--VVEAKAEDLPFP------------SGAFEA 117 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC--SC--EEECCTTSCCSC------------TTCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC--CC--EEECcHHHCCCC------------CCCEEE
Confidence 67899999999999999999999999999999999999999875 22 889999887642 357899
Q ss_pred EeecCC-CcCc-------HHHHHHhccCCCce
Q 015990 221 VVANIP-FNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 221 Vv~NlP-y~i~-------s~il~~L~~~g~~~ 244 (397)
|+++.+ +++. ..+.+.|.++|.++
T Consensus 118 v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 149 (260)
T 2avn_A 118 VLALGDVLSYVENKDKAFSEIRRVLVPDGLLI 149 (260)
T ss_dssp EEECSSHHHHCSCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcchhhhccccHHHHHHHHHHHcCCCeEEE
Confidence 988643 2221 23445566776554
No 213
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.86 E-value=2e-09 Score=108.63 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=77.4
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccch
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHI 201 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~ 201 (397)
+.......+...+++.++++|||+|||+|..|..+++.. .+|+|+|+|+.+++.+++++...+ +++++++|+.+.+.
T Consensus 230 ~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~ 309 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ 309 (429)
T ss_dssp ECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH
T ss_pred eeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh
Confidence 334455567777888999999999999999999999974 699999999999999999987655 68999999987642
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
. + ..+.||.|+.|+|+..
T Consensus 310 ~------~----~~~~fD~Vl~D~Pcsg 327 (429)
T 1sqg_A 310 W------C----GEQQFDRILLDAPCSA 327 (429)
T ss_dssp H------H----TTCCEEEEEEECCCCC
T ss_pred h------c----ccCCCCEEEEeCCCCc
Confidence 1 0 2357999999999853
No 214
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.86 E-value=3.5e-09 Score=101.63 Aligned_cols=78 Identities=14% Similarity=0.152 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
..+.+|||||||+|.++..+++. ..+|++||+|+.+++.|++++.. .++++++.+|+.+....
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--------- 159 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK--------- 159 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG---------
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh---------
Confidence 35679999999999999999987 46999999999999999998742 35899999998764211
Q ss_pred hcCCCCcceEeecCCCc
Q 015990 212 RKSSSGFAKVVANIPFN 228 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~ 228 (397)
..+.+|+|++|+|..
T Consensus 160 --~~~~fD~Ii~d~~~~ 174 (296)
T 1inl_A 160 --FKNEFDVIIIDSTDP 174 (296)
T ss_dssp --CSSCEEEEEEEC---
T ss_pred --CCCCceEEEEcCCCc
Confidence 235799999998754
No 215
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.86 E-value=3.2e-09 Score=101.39 Aligned_cols=44 Identities=20% Similarity=0.378 Sum_probs=40.2
Q ss_pred CCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhc
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA 184 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~ 184 (397)
++.+|||||||+|.++..+++. +.+|+|||+|+.+++.|++++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 6789999999999999999997 6799999999999999998864
No 216
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.85 E-value=3.3e-09 Score=99.29 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.++.+|||||||+|..+..++.. +.+|++||+|+++++.|+++.... .|++++++|+.++..... ..
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~---------~~ 149 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAG---------HR 149 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTT---------TT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccc---------cC
Confidence 46789999999999999999986 679999999999999999998654 379999999988753210 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+.||+|+++-
T Consensus 150 ~~fD~I~s~a 159 (249)
T 3g89_A 150 EAYARAVARA 159 (249)
T ss_dssp TCEEEEEEES
T ss_pred CCceEEEECC
Confidence 5799999874
No 217
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.85 E-value=7.2e-09 Score=95.58 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCC---ceEEEEcccccc
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKC 199 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~ 199 (397)
+.++++|||||||+|+++..+++.+ .+|+|+|+|+.+++.|++|+..++ +++++.+|.++.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh
Confidence 3467899999999999999999975 489999999999999999987654 699999999754
No 218
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.84 E-value=7.1e-09 Score=110.64 Aligned_cols=89 Identities=10% Similarity=0.151 Sum_probs=73.5
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcC---CcEEEEeCCHHHHHHHHHHhc--------cCCceEEEEccc
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAG---ATVLAIEKDQHMVGLVRERFA--------SIDQLKVLQEDF 196 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~~vE~d~~~i~~a~~~~~--------~~~~v~ii~gD~ 196 (397)
..++.+++.+...++.+|||||||+|.++..|++.+ .+|+|||+|+.|++.|++++. ..++++++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 355667777777788999999999999999999987 799999999999999998653 224899999999
Q ss_pred cccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 197 VKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.++++. .+.||+|+++-.++
T Consensus 788 ~dLp~~------------d~sFDlVV~~eVLe 807 (950)
T 3htx_A 788 LEFDSR------------LHDVDIGTCLEVIE 807 (950)
T ss_dssp TSCCTT------------SCSCCEEEEESCGG
T ss_pred HhCCcc------------cCCeeEEEEeCchh
Confidence 998653 36799998875543
No 219
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.84 E-value=1.3e-09 Score=110.84 Aligned_cols=88 Identities=20% Similarity=0.187 Sum_probs=71.9
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~ 205 (397)
...+...+.+.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++...+ .++++++|+.++...
T Consensus 90 s~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~--- 166 (464)
T 3m6w_A 90 AQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEA--- 166 (464)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHH---
T ss_pred HHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhh---
Confidence 345566778889999999999999999999986 2589999999999999999986533 389999998876421
Q ss_pred hhHHhhhcCCCCcceEeecCCCc
Q 015990 206 LSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
..+.||+|+.|+|+.
T Consensus 167 --------~~~~FD~Il~D~PcS 181 (464)
T 3m6w_A 167 --------FGTYFHRVLLDAPCS 181 (464)
T ss_dssp --------HCSCEEEEEEECCCC
T ss_pred --------ccccCCEEEECCCcC
Confidence 135799999999973
No 220
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.84 E-value=1.5e-08 Score=96.37 Aligned_cols=96 Identities=23% Similarity=0.266 Sum_probs=67.1
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeC-CHHHHHHHHHHh-----ccC-------CceEEEE
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEK-DQHMVGLVRERF-----ASI-------DQLKVLQ 193 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~-d~~~i~~a~~~~-----~~~-------~~v~ii~ 193 (397)
.+.+.+.+.....++.+|||+|||+|.++..+++.+. +|+|+|+ |+.+++.|+++. ..+ ++++++.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~ 145 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVP 145 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEE
Confidence 3455555555556788999999999999999999876 8999999 999999999998 332 2577776
Q ss_pred ccccccchhhhhhhHHhhhcCCCCcceEee-cCCCcC
Q 015990 194 EDFVKCHIRSHMLSLFERRKSSSGFAKVVA-NIPFNI 229 (397)
Q Consensus 194 gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~-NlPy~i 229 (397)
.|..+... ++... ...+.||+|++ ++.|+.
T Consensus 146 ~~~~~~~~-----~~~~~-~~~~~fD~Ii~~dvl~~~ 176 (281)
T 3bzb_A 146 YRWGDSPD-----SLQRC-TGLQRFQVVLLADLLSFH 176 (281)
T ss_dssp CCTTSCTH-----HHHHH-HSCSSBSEEEEESCCSCG
T ss_pred ecCCCccH-----HHHhh-ccCCCCCEEEEeCcccCh
Confidence 66544211 00000 01357899876 777765
No 221
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.83 E-value=6e-09 Score=108.88 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.++-+|||||||.|.++..|++.|++|+|||.++.+++.|+......+ ++++.++|++++... ...+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 134 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA----------LEEGE 134 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH----------CCTTS
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh----------ccCCC
Confidence 356799999999999999999999999999999999999999886654 799999999876321 12357
Q ss_pred cceEeecCCC
Q 015990 218 FAKVVANIPF 227 (397)
Q Consensus 218 ~d~Vv~NlPy 227 (397)
||+|++.=.+
T Consensus 135 fD~v~~~e~~ 144 (569)
T 4azs_A 135 FDLAIGLSVF 144 (569)
T ss_dssp CSEEEEESCH
T ss_pred ccEEEECcch
Confidence 9999876443
No 222
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.82 E-value=4.3e-09 Score=102.80 Aligned_cols=78 Identities=17% Similarity=0.232 Sum_probs=63.5
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
...+.+|||||||+|.++..+++. +.+|++||+|+.+++.|++++.. .++++++.+|+.++...
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~-------- 189 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-------- 189 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT--------
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh--------
Confidence 346689999999999999999987 46999999999999999998752 35899999999775210
Q ss_pred hhcCCCCcceEeecCC
Q 015990 211 RRKSSSGFAKVVANIP 226 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlP 226 (397)
...+.+|+|++|++
T Consensus 190 --~~~~~fDlIi~d~~ 203 (334)
T 1xj5_A 190 --AAEGSYDAVIVDSS 203 (334)
T ss_dssp --SCTTCEEEEEECCC
T ss_pred --ccCCCccEEEECCC
Confidence 01257999999876
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.81 E-value=9.2e-09 Score=98.04 Aligned_cols=78 Identities=18% Similarity=0.236 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
..++.+|||||||+|.++..+++. +.+|++||+|+.+++.|++++.. .++++++.+|+.+....
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-------- 147 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN-------- 147 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH--------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh--------
Confidence 346689999999999999999987 46999999999999999999864 35899999999775211
Q ss_pred hhcCCCCcceEeecCCC
Q 015990 211 RRKSSSGFAKVVANIPF 227 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy 227 (397)
..+.+|+|++|.+.
T Consensus 148 ---~~~~fD~Ii~d~~~ 161 (283)
T 2i7c_A 148 ---VTNTYDVIIVDSSD 161 (283)
T ss_dssp ---CCSCEEEEEEECCC
T ss_pred ---CCCCceEEEEcCCC
Confidence 23679999998754
No 224
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.81 E-value=1.1e-08 Score=94.23 Aligned_cols=96 Identities=13% Similarity=0.177 Sum_probs=72.3
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEcccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFV 197 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~ 197 (397)
.+.+.....+...+...++.+|||||||+|+.+..+++. +.+|+++|+++.+++.|++++... ++++++.+|+.
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 456666665555555567789999999999999999986 569999999999999999987543 36999999987
Q ss_pred ccchhhhhhhHHhhhcCC--CCcceEeecCCC
Q 015990 198 KCHIRSHMLSLFERRKSS--SGFAKVVANIPF 227 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~--~~~d~Vv~NlPy 227 (397)
+.... +. ... +.+|+|+.+.+.
T Consensus 135 ~~l~~-----l~---~~~~~~~fD~V~~d~~~ 158 (232)
T 3cbg_A 135 ATLEQ-----LT---QGKPLPEFDLIFIDADK 158 (232)
T ss_dssp HHHHH-----HH---TSSSCCCEEEEEECSCG
T ss_pred HHHHH-----HH---hcCCCCCcCEEEECCCH
Confidence 64211 00 011 579999988763
No 225
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.81 E-value=5.6e-09 Score=101.15 Aligned_cols=77 Identities=17% Similarity=0.235 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
..+.+|||||||+|.++..+++. ..+|++||+|+.+++.|++++.. .++++++.+|+.+....
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~--------- 177 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN--------- 177 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH---------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh---------
Confidence 45679999999999999999987 46999999999999999999854 35899999999774211
Q ss_pred hcCCCCcceEeecCCC
Q 015990 212 RKSSSGFAKVVANIPF 227 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy 227 (397)
..+.+|+|++|++.
T Consensus 178 --~~~~fD~Ii~d~~~ 191 (314)
T 2b2c_A 178 --HKNEFDVIITDSSD 191 (314)
T ss_dssp --CTTCEEEEEECCC-
T ss_pred --cCCCceEEEEcCCC
Confidence 23579999999853
No 226
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.80 E-value=1.5e-08 Score=97.96 Aligned_cols=88 Identities=14% Similarity=0.145 Sum_probs=72.6
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccchhhhhh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~~~~~~ 206 (397)
.++..+.+.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.++++++..+ +++++++|+.++.....
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~-- 170 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDP-- 170 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCG--
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcccc--
Confidence 4555678889999999999999999999985 3689999999999999999987654 89999999988753210
Q ss_pred hHHhhhcCCCCcceEeecCCCc
Q 015990 207 SLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
....||.|+.|+|+.
T Consensus 171 -------~~~~fD~Vl~D~PcS 185 (309)
T 2b9e_A 171 -------RYHEVHYILLDPSCS 185 (309)
T ss_dssp -------GGTTEEEEEECCCCC
T ss_pred -------ccCCCCEEEEcCCcC
Confidence 014689999999985
No 227
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.80 E-value=1.4e-08 Score=97.58 Aligned_cols=97 Identities=11% Similarity=0.106 Sum_probs=70.9
Q ss_pred HHHHHHHHHhcC--CCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccC---------CceEEEEcc
Q 015990 128 EINDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI---------DQLKVLQED 195 (397)
Q Consensus 128 ~i~~~i~~~~~~--~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~---------~~v~ii~gD 195 (397)
.+++.+++.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++.... .+++++++|
T Consensus 19 ~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 19 VLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp HHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred HHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 444555555432 36789999999999999999976 569999999999999999987532 379999999
Q ss_pred ccccchhhhhhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
+.+.+..+.+. ...+.+|+|+++...++.
T Consensus 99 ~~~~~~~~~~~------~~~~~fD~V~~~~~l~~~ 127 (313)
T 3bgv_A 99 SSKELLIDKFR------DPQMCFDICSCQFVCHYS 127 (313)
T ss_dssp TTTSCSTTTCS------STTCCEEEEEEETCGGGG
T ss_pred ccccchhhhcc------cCCCCEEEEEEecchhhc
Confidence 98875211110 012479999999877554
No 228
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.79 E-value=9.9e-09 Score=97.69 Aligned_cols=77 Identities=19% Similarity=0.288 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHh----c--------cCCceEEEEccccccchhhhhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERF----A--------SIDQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~----~--------~~~~v~ii~gD~~~~~~~~~~~ 206 (397)
.++.+|||||||+|.++..+++.+ .+|++||+|+.+++.|++++ . ..++++++.+|+.++..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~----- 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK----- 148 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH-----
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhc-----
Confidence 456899999999999999999884 58999999999999999987 1 13589999999876421
Q ss_pred hHHhhhcCCCCcceEeecCCCc
Q 015990 207 SLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
..+.+|+|++|+|..
T Consensus 149 -------~~~~fD~Ii~d~~~~ 163 (281)
T 1mjf_A 149 -------NNRGFDVIIADSTDP 163 (281)
T ss_dssp -------HCCCEEEEEEECCCC
T ss_pred -------ccCCeeEEEECCCCC
Confidence 025799999999853
No 229
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.78 E-value=2.6e-08 Score=94.43 Aligned_cols=117 Identities=16% Similarity=0.077 Sum_probs=77.8
Q ss_pred HHHHHHHHHHhc-CCCCCEEEEEcCcc---cHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccc
Q 015990 127 SEINDQLAAAAA-VQEGDIVLEIGPGT---GSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCH 200 (397)
Q Consensus 127 ~~i~~~i~~~~~-~~~~~~VLEIG~G~---G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~ 200 (397)
.....++++.+. ..+..+|||||||+ |.++..+++. +.+|++||+|+.|++.|++++...++++++++|+.+.+
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHH
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCch
Confidence 345556666655 33457999999999 9988777664 67999999999999999999876678999999998753
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCcC-c--------HHHHHHhccCCCce
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFNI-S--------TDVIKQLLPMGDIF 244 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i-~--------s~il~~L~~~g~~~ 244 (397)
......+. .+......+|.|+++.-++. . ..+.+.|.++|.++
T Consensus 142 ~~~~~~~~-~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~ 193 (274)
T 2qe6_A 142 YILNHPDV-RRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLF 193 (274)
T ss_dssp HHHHSHHH-HHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEE
T ss_pred hhhccchh-hccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEE
Confidence 21000000 00011246888888754432 2 23444566676554
No 230
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.78 E-value=2.8e-08 Score=90.84 Aligned_cols=68 Identities=21% Similarity=0.326 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcc
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d 219 (397)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.+++++ ++++++.+|+.+.+. .+.+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~~~~-------------~~~~D 102 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL---PDATLHQGDMRDFRL-------------GRKFS 102 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC---TTCEEEECCTTTCCC-------------SSCEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC---CCCEEEECCHHHccc-------------CCCCc
Confidence 56789999999999999999998889999999999999999885 478999999988753 25789
Q ss_pred eEee
Q 015990 220 KVVA 223 (397)
Q Consensus 220 ~Vv~ 223 (397)
+|++
T Consensus 103 ~v~~ 106 (239)
T 3bxo_A 103 AVVS 106 (239)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9983
No 231
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.78 E-value=3.2e-09 Score=100.29 Aligned_cols=90 Identities=10% Similarity=0.017 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhhHHhhhc
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
..+++|||||||+|.++..+++.+.+|++||+|+.+++.|++++.. .++++++.+|+.++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-------------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-------------
Confidence 3567999999999999999988767899999999999999987643 358999999998762
Q ss_pred CCCCcceEeecCCC--cCcHHHHHHhccCCCce
Q 015990 214 SSSGFAKVVANIPF--NISTDVIKQLLPMGDIF 244 (397)
Q Consensus 214 ~~~~~d~Vv~NlPy--~i~s~il~~L~~~g~~~ 244 (397)
+.+|+|++|.+- .....+.+.|.++|.++
T Consensus 138 --~~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv 168 (262)
T 2cmg_A 138 --KKYDLIFCLQEPDIHRIDGLKRMLKEDGVFI 168 (262)
T ss_dssp --CCEEEEEESSCCCHHHHHHHHTTEEEEEEEE
T ss_pred --hhCCEEEECCCChHHHHHHHHHhcCCCcEEE
Confidence 468999999642 22234455566666554
No 232
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.78 E-value=6.5e-09 Score=89.78 Aligned_cols=86 Identities=17% Similarity=0.301 Sum_probs=63.0
Q ss_pred HHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhh
Q 015990 131 DQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 131 ~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~ 206 (397)
..+++... +.++.+|||+|||+|.++..+++. +.+++++|+++ +++. ++++++.+|+.+.+..+.+.
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~~~~~~~~~ 81 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------VGVDFLQGDFRDELVMKALL 81 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------TTEEEEESCTTSHHHHHHHH
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------CcEEEEEcccccchhhhhhh
Confidence 34455554 677889999999999999999987 36999999998 6532 57999999998865211111
Q ss_pred hHHhhhcCCCCcceEeecCCCcC
Q 015990 207 SLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
..+ ..+.+|+|++|.|++.
T Consensus 82 ~~~----~~~~~D~i~~~~~~~~ 100 (180)
T 1ej0_A 82 ERV----GDSKVQVVMSDMAPNM 100 (180)
T ss_dssp HHH----TTCCEEEEEECCCCCC
T ss_pred ccC----CCCceeEEEECCCccc
Confidence 101 2357999999998764
No 233
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.77 E-value=8.3e-09 Score=104.77 Aligned_cols=88 Identities=16% Similarity=0.199 Sum_probs=72.6
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--C-CcEEEEeCCHHHHHHHHHHhccCC--ceEEEEccccccchhhhh
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--G-ATVLAIEKDQHMVGLVRERFASID--QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~-~~V~~vE~d~~~i~~a~~~~~~~~--~v~ii~gD~~~~~~~~~~ 205 (397)
..+...+++.++++|||+|||+|..|..+++. + ++|+|+|+++.+++.+++++...+ +++++++|+.+.+..
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~--- 325 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI--- 325 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS---
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh---
Confidence 44566678889999999999999999999985 3 689999999999999999987543 899999999886421
Q ss_pred hhHHhhhcCCCCcceEeecCCCc
Q 015990 206 LSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
...+.||.|+.|+|+.
T Consensus 326 -------~~~~~fD~Vl~D~Pcs 341 (450)
T 2yxl_A 326 -------IGEEVADKVLLDAPCT 341 (450)
T ss_dssp -------SCSSCEEEEEEECCCC
T ss_pred -------hccCCCCEEEEcCCCC
Confidence 0125799999999984
No 234
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.77 E-value=1.2e-08 Score=94.74 Aligned_cols=83 Identities=10% Similarity=0.159 Sum_probs=65.4
Q ss_pred cCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCc----------------------------
Q 015990 138 AVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQ---------------------------- 188 (397)
Q Consensus 138 ~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~---------------------------- 188 (397)
...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++...++
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 345678999999999999999998887 999999999999999998865432
Q ss_pred ---e-EEEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 189 ---L-KVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 189 ---v-~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
+ +++.+|+.+...... ...+.+|+|+++...+
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~--------~~~~~fD~v~~~~~l~ 168 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGG--------VSLPPADCLLSTLCLD 168 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTT--------CCCCCEEEEEEESCHH
T ss_pred hhhheeEEEeeeccCCCCCc--------cccCCccEEEEhhhhh
Confidence 7 999999988643100 0125799999886544
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.77 E-value=2.4e-08 Score=89.64 Aligned_cols=81 Identities=22% Similarity=0.356 Sum_probs=60.2
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
+.++.+|||+|||+|.+|..+++++++|+|||+++.. ..++++++++|+.+....+.+.+.+.. ...+.+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~~~~v~~~~~D~~~~~~~~~~~~~~~~-~~~~~~ 92 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------EIAGVRFIRCDIFKETIFDDIDRALRE-EGIEKV 92 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------CCTTCEEEECCTTSSSHHHHHHHHHHH-HTCSSE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------cCCCeEEEEccccCHHHHHHHHHHhhc-ccCCcc
Confidence 4678999999999999999999998899999999741 235899999999887543222221110 011389
Q ss_pred ceEeecCCCcC
Q 015990 219 AKVVANIPFNI 229 (397)
Q Consensus 219 d~Vv~NlPy~i 229 (397)
|+|++|++.+.
T Consensus 93 D~Vlsd~~~~~ 103 (191)
T 3dou_A 93 DDVVSDAMAKV 103 (191)
T ss_dssp EEEEECCCCCC
T ss_pred eEEecCCCcCC
Confidence 99999987654
No 236
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.75 E-value=2.1e-08 Score=89.51 Aligned_cols=87 Identities=20% Similarity=0.251 Sum_probs=59.3
Q ss_pred HHHHhc-CCCCCEEEEEcCcccHHHHHHHHc----CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchh-----
Q 015990 133 LAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA----GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIR----- 202 (397)
Q Consensus 133 i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~----~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~----- 202 (397)
+.+... +.++.+|||+|||+|.++..++++ +.+|+|+|+++.. ..++++++++|+.+....
T Consensus 13 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 13 LDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------PIPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp HHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------CCTTCEEEECCTTTTSSCCC---
T ss_pred HHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------CCCCceEEEccccchhhhhhccc
Confidence 333333 467889999999999999999986 3689999999831 235799999999876410
Q ss_pred ---------hhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 203 ---------SHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 203 ---------~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
....++... .....+|+|++|.+.++
T Consensus 84 ~~i~~~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~ 118 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEI-LQDKKIDIILSDAAVPC 118 (201)
T ss_dssp --------CHHHHHHHHH-HTTCCEEEEEECCCCCC
T ss_pred cccccccchhhHHHHHhh-cCCCcccEEEeCCCcCC
Confidence 000000000 12357999999987655
No 237
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.75 E-value=5.3e-09 Score=98.27 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=69.4
Q ss_pred cCCCCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCC-----------------------------
Q 015990 138 AVQEGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASID----------------------------- 187 (397)
Q Consensus 138 ~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~----------------------------- 187 (397)
...++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++++..+
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 455778999999999999888887775 79999999999999998764321
Q ss_pred --ceE-EEEccccccchhhhhhhHHhhhcCCCCcceEeecCCCcC-----------cHHHHHHhccCCCce
Q 015990 188 --QLK-VLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI-----------STDVIKQLLPMGDIF 244 (397)
Q Consensus 188 --~v~-ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i-----------~s~il~~L~~~g~~~ 244 (397)
+++ ++++|+.+...... ...+.||+|+++.-++. ...+.+.|+++|.++
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~--------~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li 194 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAP--------AVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLV 194 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTT--------CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCc--------cccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 243 88999887422100 01257999999865432 113344566777654
No 238
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.74 E-value=2.4e-08 Score=96.61 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=61.4
Q ss_pred CEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 143 DIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
.+|||||||+|.++..+++. +.+|++||+|+.+++.|++++... ++++++++|+.++... ...+.|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~----------~~~~~f 160 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES----------FTPASR 160 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT----------CCTTCE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh----------ccCCCC
Confidence 39999999999999999983 669999999999999999998643 5899999999876211 023579
Q ss_pred ceEeecCC
Q 015990 219 AKVVANIP 226 (397)
Q Consensus 219 d~Vv~NlP 226 (397)
|+|+.|++
T Consensus 161 DvIi~D~~ 168 (317)
T 3gjy_A 161 DVIIRDVF 168 (317)
T ss_dssp EEEEECCS
T ss_pred CEEEECCC
Confidence 99999864
No 239
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.73 E-value=3.2e-08 Score=93.61 Aligned_cols=95 Identities=15% Similarity=0.243 Sum_probs=79.5
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhh
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~ 204 (397)
.-|.+++.+++.+.+++++.+||.+||.|..|..+++++++|+|+|.|+.+++.|++ +.. ++++++++|+.+++..
T Consensus 6 H~pVLl~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~~-- 81 (285)
T 1wg8_A 6 HVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKRH-- 81 (285)
T ss_dssp CCCTTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHHHH--
T ss_pred chhHHHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHHHH--
Confidence 345678899999999999999999999999999999998899999999999999999 766 6999999999887521
Q ss_pred hhhHHhhhcCCCCcceEeecCCCc
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
+.. ...+.+|.|+.||++.
T Consensus 82 ----L~~-~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 82 ----LAA-LGVERVDGILADLGVS 100 (285)
T ss_dssp ----HHH-TTCSCEEEEEEECSCC
T ss_pred ----HHH-cCCCCcCEEEeCCccc
Confidence 111 1224689999999864
No 240
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.72 E-value=2.4e-08 Score=95.55 Aligned_cols=104 Identities=21% Similarity=0.281 Sum_probs=71.7
Q ss_pred HHHHHHHHhcCC-CCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCceEEE-Eccccccchhhhh
Q 015990 129 INDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVL-QEDFVKCHIRSHM 205 (397)
Q Consensus 129 i~~~i~~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii-~gD~~~~~~~~~~ 205 (397)
-+..+++.+.+. ++.+|||||||||.+|..|++.++ +|+|||+++.|++.+.++ .+++... ..|+..+...+.
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~~rv~~~~~~ni~~l~~~~l- 147 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---DDRVRSMEQYNFRYAEPVDF- 147 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---CTTEEEECSCCGGGCCGGGC-
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---CcccceecccCceecchhhC-
Confidence 345666666665 567999999999999999999865 899999999999885442 2344433 245544432210
Q ss_pred hhHHhhhcCCCCcceEeecCCCc----CcHHHHHHhccCCCce
Q 015990 206 LSLFERRKSSSGFAKVVANIPFN----ISTDVIKQLLPMGDIF 244 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~----i~s~il~~L~~~g~~~ 244 (397)
....+|.|++|..|. +..++.+.|.++|.++
T Consensus 148 --------~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv 182 (291)
T 3hp7_A 148 --------TEGLPSFASIDVSFISLNLILPALAKILVDGGQVV 182 (291)
T ss_dssp --------TTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEE
T ss_pred --------CCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEE
Confidence 123489999998875 3445667777877653
No 241
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.68 E-value=4.7e-08 Score=88.42 Aligned_cols=81 Identities=21% Similarity=0.237 Sum_probs=63.5
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHh
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
..+++.+. .++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++. .+++.+|+.+....
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-----~~~~~~d~~~~~~~-------- 88 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-----DHVVLGDIETMDMP-------- 88 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-----SEEEESCTTTCCCC--------
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-----CcEEEcchhhcCCC--------
Confidence 34555555 67789999999999999999998889999999999999998765 26889998764321
Q ss_pred hhcCCCCcceEeecCCC
Q 015990 211 RRKSSSGFAKVVANIPF 227 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy 227 (397)
...+.+|+|+++-.+
T Consensus 89 --~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 89 --YEEEQFDCVIFGDVL 103 (230)
T ss_dssp --SCTTCEEEEEEESCG
T ss_pred --CCCCccCEEEECChh
Confidence 023578999987554
No 242
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.67 E-value=3.9e-08 Score=97.60 Aligned_cols=89 Identities=11% Similarity=0.041 Sum_probs=68.7
Q ss_pred CCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHHHHHHHHHHhccC---------------C--ceEEEEccccccch
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASI---------------D--QLKVLQEDFVKCHI 201 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~~i~~a~~~~~~~---------------~--~v~ii~gD~~~~~~ 201 (397)
++.+|||+|||+|.++..++.. + .+|+++|+|+++++.+++|++.+ + +++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6789999999999999999987 3 58999999999999999998655 3 59999999977532
Q ss_pred hhhhhhHHhhhcCCCCcceEeecCCCcCcHHHH----HHhccCC
Q 015990 202 RSHMLSLFERRKSSSGFAKVVANIPFNISTDVI----KQLLPMG 241 (397)
Q Consensus 202 ~~~~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il----~~L~~~g 241 (397)
. ....||+|+.|+|+. ..+++ ..+.++|
T Consensus 127 ~-----------~~~~fD~I~lDP~~~-~~~~l~~a~~~lk~gG 158 (378)
T 2dul_A 127 E-----------RHRYFHFIDLDPFGS-PMEFLDTALRSAKRRG 158 (378)
T ss_dssp H-----------STTCEEEEEECCSSC-CHHHHHHHHHHEEEEE
T ss_pred h-----------ccCCCCEEEeCCCCC-HHHHHHHHHHhcCCCC
Confidence 1 124799999887654 34443 3444555
No 243
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.67 E-value=2.3e-08 Score=96.26 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=65.5
Q ss_pred CCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCC--------ceEEEEccccccchhhhhhhHHhh
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASID--------QLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~--------~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
++.+|||||||+|..+..++.. +.+|+|+|+|+.|++.|+++....+ ++++.++|+..-.....+.+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~--- 124 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV--- 124 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT---
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc---
Confidence 4789999999999866655555 5799999999999999999875422 267888887432211000000
Q ss_pred hcCCCCcceEeecCCCcC----------cHHHHHHhccCCCce
Q 015990 212 RKSSSGFAKVVANIPFNI----------STDVIKQLLPMGDIF 244 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i----------~s~il~~L~~~g~~~ 244 (397)
...+.||+|++....+. ...+.+.|+++|.++
T Consensus 125 -~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i 166 (302)
T 2vdw_A 125 -FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVL 166 (302)
T ss_dssp -CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEE
T ss_pred -ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 12357999987644321 123556677777654
No 244
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.65 E-value=1.1e-08 Score=102.32 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceE--EEEccccccchhhh
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLK--VLQEDFVKCHIRSH 204 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~--ii~gD~~~~~~~~~ 204 (397)
...++.+++.+.+.++.+|||||||+|.++..+++.+.+|+|+|+++.+++.|+++- .+... +..+|+..+++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~--~~~~~~~~~~~~~~~l~~--- 167 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKG--IRVRTDFFEKATADDVRR--- 167 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTT--CCEECSCCSHHHHHHHHH---
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcC--CCcceeeechhhHhhccc---
Confidence 345667777778888899999999999999999999999999999999999998761 11111 11222222221
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
..+.+|+|+++-.++.. ..+.+.|.++|.++
T Consensus 168 ---------~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~ 205 (416)
T 4e2x_A 168 ---------TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFV 205 (416)
T ss_dssp ---------HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEE
T ss_pred ---------CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEE
Confidence 12679999988665332 23455666666554
No 245
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.65 E-value=1.1e-08 Score=97.36 Aligned_cols=80 Identities=16% Similarity=0.185 Sum_probs=59.7
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhc---cCC-ceEEE--Eccccccchhhh
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFA---SID-QLKVL--QEDFVKCHIRSH 204 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~---~~~-~v~ii--~gD~~~~~~~~~ 204 (397)
..+.+...+.++.+|||+|||+|.++..++++ ++|+|||+++ |+..++++.. ..+ +++++ ++|+.+++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---- 145 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---- 145 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC----
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC----
Confidence 44555544667889999999999999999998 8999999998 5433322210 112 78999 99998763
Q ss_pred hhhHHhhhcCCCCcceEeecCC
Q 015990 205 MLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
.+.+|+|++|..
T Consensus 146 ----------~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 146 ----------PFQADTVLCDIG 157 (276)
T ss_dssp ----------CCCCSEEEECCC
T ss_pred ----------CCCcCEEEECCC
Confidence 257999999987
No 246
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.64 E-value=7.7e-09 Score=95.82 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=67.1
Q ss_pred HHHHHHHHHhcCC-CCCEEEEEcCcccHHHHHHHHcCC-cEEEEeCCHHHHHHHHHHhccCCceEEEE-ccccccchhhh
Q 015990 128 EINDQLAAAAAVQ-EGDIVLEIGPGTGSLTNVLLNAGA-TVLAIEKDQHMVGLVRERFASIDQLKVLQ-EDFVKCHIRSH 204 (397)
Q Consensus 128 ~i~~~i~~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii~-gD~~~~~~~~~ 204 (397)
.-+.++++.+.+. ++.+|||||||+|.+|..+++.++ +|+|||+++.|++.++++.. ++.... .++......+.
T Consensus 23 ~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~---~~~~~~~~~~~~~~~~~~ 99 (232)
T 3opn_A 23 LKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE---RVVVMEQFNFRNAVLADF 99 (232)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT---TEEEECSCCGGGCCGGGC
T ss_pred HHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc---cccccccceEEEeCHhHc
Confidence 3456677777655 466999999999999999999974 99999999999999877532 232221 12211111100
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCcHHHHHHhccCCCce
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIF 244 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~~ 244 (397)
-... .....+|.++.++ -.+..++.+.|+++|.++
T Consensus 100 ~~~~----~d~~~~D~v~~~l-~~~l~~i~rvLkpgG~lv 134 (232)
T 3opn_A 100 EQGR----PSFTSIDVSFISL-DLILPPLYEILEKNGEVA 134 (232)
T ss_dssp CSCC----CSEEEECCSSSCG-GGTHHHHHHHSCTTCEEE
T ss_pred CcCC----CCEEEEEEEhhhH-HHHHHHHHHhccCCCEEE
Confidence 0000 0012345555554 244556777788887654
No 247
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.63 E-value=1.1e-07 Score=91.75 Aligned_cols=91 Identities=10% Similarity=0.134 Sum_probs=71.2
Q ss_pred HHHHHHHHHhcC--CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccc
Q 015990 128 EINDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCH 200 (397)
Q Consensus 128 ~i~~~i~~~~~~--~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~ 200 (397)
.....+++.++. .++.+|||+|||+|.++..+++. +.+++++|++ .+++.|++++... ++++++.+|+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 150 NPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD 228 (335)
T ss_dssp HHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC
T ss_pred hhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC
Confidence 344567777776 78889999999999999999987 6799999999 9999999987542 36999999998764
Q ss_pred hhhhhhhHHhhhcCCCCcceEeec-CCCcCcHH
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVAN-IPFNISTD 232 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~N-lPy~i~s~ 232 (397)
+. ..+|+|+++ ...++..+
T Consensus 229 ~~-------------~~~D~v~~~~~l~~~~~~ 248 (335)
T 2r3s_A 229 YG-------------NDYDLVLLPNFLHHFDVA 248 (335)
T ss_dssp CC-------------SCEEEEEEESCGGGSCHH
T ss_pred CC-------------CCCcEEEEcchhccCCHH
Confidence 32 348888874 44455443
No 248
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.63 E-value=1.3e-08 Score=96.16 Aligned_cols=81 Identities=11% Similarity=0.075 Sum_probs=60.3
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHh---ccCC-ceEEE--Eccccccchhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERF---ASID-QLKVL--QEDFVKCHIRS 203 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~---~~~~-~v~ii--~gD~~~~~~~~ 203 (397)
+..+.+...+.++.+|||+|||+|.++..+++. ++|+|||+++ |+..+++.. ...+ +++++ ++|+.+++
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--- 137 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--- 137 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC---
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC---
Confidence 345555555678899999999999999999998 8999999998 532222111 0112 78999 89998763
Q ss_pred hhhhHHhhhcCCCCcceEeecCC
Q 015990 204 HMLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
...+|+|++|..
T Consensus 138 -----------~~~fD~V~sd~~ 149 (265)
T 2oxt_A 138 -----------VERTDVIMCDVG 149 (265)
T ss_dssp -----------CCCCSEEEECCC
T ss_pred -----------CCCCcEEEEeCc
Confidence 257999999977
No 249
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.63 E-value=6.3e-08 Score=91.81 Aligned_cols=93 Identities=12% Similarity=0.027 Sum_probs=63.2
Q ss_pred HHHHHHHhcC--CCCCEEEEEcCcccHHHHHHHH-cCCcEEEEeCCHHHHHHHHHHhccCC-------------------
Q 015990 130 NDQLAAAAAV--QEGDIVLEIGPGTGSLTNVLLN-AGATVLAIEKDQHMVGLVRERFASID------------------- 187 (397)
Q Consensus 130 ~~~i~~~~~~--~~~~~VLEIG~G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~~~~~~~------------------- 187 (397)
...+.+.+.. .++.+|||||||+|.++..++. .+.+|+|+|+++.|++.|++++...+
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 4455555533 3678999999999996554444 36799999999999999998654211
Q ss_pred -------------ceEEEEccccc-cchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 188 -------------QLKVLQEDFVK-CHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 188 -------------~v~ii~gD~~~-~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
.++++.+|+.+ .++.+.. ...+.||+|+++..++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~~~fD~V~~~~~l~~ 186 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGS-------PAPLPADALVSAFCLEA 186 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSC-------SSCSSEEEEEEESCHHH
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccc-------cCCCCCCEEEehhhhhh
Confidence 15677778877 4332100 02246999999976544
No 250
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.62 E-value=6.4e-08 Score=89.75 Aligned_cols=76 Identities=12% Similarity=0.001 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
.++.+|||||||+|.++..+. .+.+++|+|+|+.+++.+++++... .+..+.++|....++ ++.+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~-------------~~~~ 169 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP-------------AEAG 169 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC-------------CCBC
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC-------------CCCc
Confidence 467899999999999999887 6679999999999999999998654 488999999988764 3579
Q ss_pred ceEeecCCCcC
Q 015990 219 AKVVANIPFNI 229 (397)
Q Consensus 219 d~Vv~NlPy~i 229 (397)
|+|+++.-++.
T Consensus 170 DvvLllk~lh~ 180 (253)
T 3frh_A 170 DLALIFKLLPL 180 (253)
T ss_dssp SEEEEESCHHH
T ss_pred chHHHHHHHHH
Confidence 99999865543
No 251
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.62 E-value=8.3e-08 Score=94.32 Aligned_cols=87 Identities=23% Similarity=0.249 Sum_probs=68.7
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~ 204 (397)
...+++.++..++.+|||||||+|.++..+++. +.+++++|+ +.+++.|++++... ++++++.+|+.+ ++
T Consensus 171 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~--- 245 (374)
T 1qzz_A 171 YEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL--- 245 (374)
T ss_dssp THHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC---
T ss_pred HHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC---
Confidence 355667777778899999999999999999987 468999999 99999999987654 379999999976 22
Q ss_pred hhhHHhhhcCCCCcceEeecCCC-cCcH
Q 015990 205 MLSLFERRKSSSGFAKVVANIPF-NIST 231 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy-~i~s 231 (397)
+..+|+|+++..+ ++..
T Consensus 246 ----------~~~~D~v~~~~vl~~~~~ 263 (374)
T 1qzz_A 246 ----------PVTADVVLLSFVLLNWSD 263 (374)
T ss_dssp ----------SCCEEEEEEESCGGGSCH
T ss_pred ----------CCCCCEEEEeccccCCCH
Confidence 1248888877554 3443
No 252
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.60 E-value=1.1e-07 Score=93.18 Aligned_cols=89 Identities=16% Similarity=0.179 Sum_probs=70.8
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchh
Q 015990 128 EINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIR 202 (397)
Q Consensus 128 ~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~ 202 (397)
...+.+++.++..++.+|||||||+|.++..+++. +.+++++|+ +.+++.+++++... ++++++.+|+.+.++.
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 44567778888888899999999999999999987 569999999 99999999987643 3699999999876432
Q ss_pred hhhhhHHhhhcCCCCcceEeecCCC-cCcH
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIPF-NIST 231 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlPy-~i~s 231 (397)
..|+|+++..+ ++..
T Consensus 256 --------------~~D~v~~~~vlh~~~d 271 (359)
T 1x19_A 256 --------------EADAVLFCRILYSANE 271 (359)
T ss_dssp --------------CCSEEEEESCGGGSCH
T ss_pred --------------CCCEEEEechhccCCH
Confidence 23888776554 3443
No 253
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.59 E-value=1.2e-07 Score=84.06 Aligned_cols=77 Identities=16% Similarity=0.292 Sum_probs=56.2
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHc-C----------CcEEEEeCCHHHHHHHHHHhccCCceEEE-Eccccccchhhhhh
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNA-G----------ATVLAIEKDQHMVGLVRERFASIDQLKVL-QEDFVKCHIRSHML 206 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~-~----------~~V~~vE~d~~~i~~a~~~~~~~~~v~ii-~gD~~~~~~~~~~~ 206 (397)
+.++++|||+|||+|.++..+++. + .+|+|+|+++.+ ...+++++ .+|+.+.+......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEEeccCCCHHHHHHHH
Confidence 567899999999999999999987 4 789999999832 12478899 99987754321111
Q ss_pred hHHhhhcCCCCcceEeecCCCc
Q 015990 207 SLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
..+ ....+|+|++|.+++
T Consensus 91 ~~~----~~~~fD~V~~~~~~~ 108 (196)
T 2nyu_A 91 EVL----PGRRADVILSDMAPN 108 (196)
T ss_dssp HHS----GGGCEEEEEECCCCC
T ss_pred Hhc----CCCCCcEEEeCCCCC
Confidence 111 124799999987654
No 254
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.58 E-value=8e-08 Score=95.68 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--C-CcEEEEeCCHHHHHHHHHHhccCC--c--eEEEEccccccch-hhhhhhHHhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--G-ATVLAIEKDQHMVGLVRERFASID--Q--LKVLQEDFVKCHI-RSHMLSLFER 211 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~-~~V~~vE~d~~~i~~a~~~~~~~~--~--v~ii~gD~~~~~~-~~~~~~~~~~ 211 (397)
.++.+|||++||+|.++..++.+ | .+|+++|+|+.+++.+++|++.++ + ++++++|+.++.. .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~--------- 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE--------- 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC---------
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh---------
Confidence 46789999999999999999985 4 589999999999999999998764 4 9999999976521 1
Q ss_pred hcCCCCcceEeecCCCcCcHHHHH----HhccCC
Q 015990 212 RKSSSGFAKVVANIPFNISTDVIK----QLLPMG 241 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i~s~il~----~L~~~g 241 (397)
....||+|+.|+ |....+++. .+.++|
T Consensus 122 --~~~~fD~V~lDP-~g~~~~~l~~a~~~Lk~gG 152 (392)
T 3axs_A 122 --WGFGFDYVDLDP-FGTPVPFIESVALSMKRGG 152 (392)
T ss_dssp --CSSCEEEEEECC-SSCCHHHHHHHHHHEEEEE
T ss_pred --hCCCCcEEEECC-CcCHHHHHHHHHHHhCCCC
Confidence 125799999997 554444443 344555
No 255
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.57 E-value=2.1e-08 Score=96.75 Aligned_cols=79 Identities=10% Similarity=0.129 Sum_probs=57.2
Q ss_pred HHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeC----CHHHHHHHHHHhccC--CceEEEEc-cccccchhhhh
Q 015990 133 LAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEK----DQHMVGLVRERFASI--DQLKVLQE-DFVKCHIRSHM 205 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~----d~~~i~~a~~~~~~~--~~v~ii~g-D~~~~~~~~~~ 205 (397)
+.+...+.++.+|||+|||+|.+|..++++ ++|+|||+ ++.+++.+. .... ++++++++ |+..++
T Consensus 74 i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~----- 145 (305)
T 2p41_A 74 FVERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP----- 145 (305)
T ss_dssp HHHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC-----
T ss_pred HHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC-----
Confidence 344433567889999999999999999998 68999999 454332111 1111 47999999 887763
Q ss_pred hhHHhhhcCCCCcceEeecCCCc
Q 015990 206 LSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
...+|+|++|.+.+
T Consensus 146 ---------~~~fD~V~sd~~~~ 159 (305)
T 2p41_A 146 ---------PERCDTLLCDIGES 159 (305)
T ss_dssp ---------CCCCSEEEECCCCC
T ss_pred ---------cCCCCEEEECCccc
Confidence 24799999998753
No 256
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.54 E-value=5.8e-08 Score=92.38 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCcccHHHHHHH----Hc--CCcE--EEEeCCHHHHHHHHHHhccC---CceE--EEEccccccchhhhhh
Q 015990 140 QEGDIVLEIGPGTGSLTNVLL----NA--GATV--LAIEKDQHMVGLVRERFASI---DQLK--VLQEDFVKCHIRSHML 206 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La----~~--~~~V--~~vE~d~~~i~~a~~~~~~~---~~v~--ii~gD~~~~~~~~~~~ 206 (397)
.++.+|||||||+|.++..++ .. +..| +|+|++++|++.|++++... ++++ +..+|+.++...
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~---- 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSR---- 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHH----
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhh----
Confidence 466799999999998776443 32 3333 99999999999999987542 3444 445565543210
Q ss_pred hHHhhhcCCCCcceEeecCCCcCc-------HHHHHHhccCCCce
Q 015990 207 SLFERRKSSSGFAKVVANIPFNIS-------TDVIKQLLPMGDIF 244 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlPy~i~-------s~il~~L~~~g~~~ 244 (397)
+... ...+.||+|+++.-.+.. ..+.+.|+++|.++
T Consensus 127 -~~~~-~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~ 169 (292)
T 2aot_A 127 -MLEK-KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKML 169 (292)
T ss_dssp -HHTT-TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEE
T ss_pred -hccc-cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEE
Confidence 0000 023679999988655432 23455667777553
No 257
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.52 E-value=1.8e-07 Score=91.48 Aligned_cols=86 Identities=20% Similarity=0.291 Sum_probs=67.2
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhh
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~ 205 (397)
..+++.++..++.+|||||||+|.++..+++. +.+++++|+ +.+++.+++++... ++++++.+|+.+. +
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~---- 246 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP-L---- 246 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC-C----
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC-C----
Confidence 45667777778899999999999999999987 457899999 99999999987643 3799999999762 1
Q ss_pred hhHHhhhcCCCCcceEeecCCC-cCcH
Q 015990 206 LSLFERRKSSSGFAKVVANIPF-NIST 231 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy-~i~s 231 (397)
+..+|+|+++..+ ++..
T Consensus 247 ---------~~~~D~v~~~~vl~~~~~ 264 (360)
T 1tw3_A 247 ---------PRKADAIILSFVLLNWPD 264 (360)
T ss_dssp ---------SSCEEEEEEESCGGGSCH
T ss_pred ---------CCCccEEEEcccccCCCH
Confidence 1348888776554 4443
No 258
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.50 E-value=1e-07 Score=89.23 Aligned_cols=85 Identities=12% Similarity=0.183 Sum_probs=68.3
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhh
Q 015990 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 129 i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~ 205 (397)
++..+++.+ .+..+|||||||+|-++..++.. ..+++|+|+|+++++.+++++..++ +..+.+.|...-++
T Consensus 122 fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p---- 195 (281)
T 3lcv_B 122 FYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL---- 195 (281)
T ss_dssp HHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC----
T ss_pred HHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC----
Confidence 444555555 34679999999999999988875 4699999999999999999987655 78889999887653
Q ss_pred hhHHhhhcCCCCcceEeecCCCc
Q 015990 206 LSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.+.+|+++++.-++
T Consensus 196 ---------~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 196 ---------DEPADVTLLLKTLP 209 (281)
T ss_dssp ---------CSCCSEEEETTCHH
T ss_pred ---------CCCcchHHHHHHHH
Confidence 36799999987653
No 259
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.50 E-value=4.9e-07 Score=89.09 Aligned_cols=87 Identities=25% Similarity=0.362 Sum_probs=68.2
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~ 204 (397)
...+++..+..++.+|||||||+|.++..+++. +.+++++|+ +.+++.|++++... ++++++.+|+.+ +.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~--- 265 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TI--- 265 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CC---
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CC---
Confidence 456677777778899999999999999999987 568999999 99999999987643 489999999983 21
Q ss_pred hhhHHhhhcCCCCcceEeecCCC-cCcH
Q 015990 205 MLSLFERRKSSSGFAKVVANIPF-NIST 231 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy-~i~s 231 (397)
+..+|+|+++-.+ ++..
T Consensus 266 ----------p~~~D~v~~~~vlh~~~d 283 (369)
T 3gwz_A 266 ----------PDGADVYLIKHVLHDWDD 283 (369)
T ss_dssp ----------CSSCSEEEEESCGGGSCH
T ss_pred ----------CCCceEEEhhhhhccCCH
Confidence 1368887765443 4444
No 260
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.49 E-value=2.7e-07 Score=89.27 Aligned_cols=87 Identities=15% Similarity=0.324 Sum_probs=68.6
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc---CCceEEEEccccccchhh
Q 015990 129 INDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 129 i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~---~~~v~ii~gD~~~~~~~~ 203 (397)
....+++.++..+ .+|||||||+|.++..+++. +.+++++|+ +.+++.+++++.. .++++++.+|+.+ ++
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-- 230 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV-- 230 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC--
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC--
Confidence 4566777777666 89999999999999999986 568999999 9999999988653 2479999999977 32
Q ss_pred hhhhHHhhhcCCCCcceEeecCCCc-CcH
Q 015990 204 HMLSLFERRKSSSGFAKVVANIPFN-IST 231 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~NlPy~-i~s 231 (397)
+..+|+|+++-..+ +..
T Consensus 231 -----------~~~~D~v~~~~vl~~~~~ 248 (334)
T 2ip2_A 231 -----------PSNGDIYLLSRIIGDLDE 248 (334)
T ss_dssp -----------CSSCSEEEEESCGGGCCH
T ss_pred -----------CCCCCEEEEchhccCCCH
Confidence 24689888775553 444
No 261
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.47 E-value=2.2e-07 Score=90.62 Aligned_cols=88 Identities=11% Similarity=0.159 Sum_probs=67.7
Q ss_pred HHHHHhcCCC-CCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhh
Q 015990 132 QLAAAAAVQE-GDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHM 205 (397)
Q Consensus 132 ~i~~~~~~~~-~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~ 205 (397)
.+++.++..+ +.+|||||||+|.++..+++. +.+++++|+ +.+++.+++++...+ +++++.+|+.+.+..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--- 244 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF--- 244 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG---
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc---
Confidence 5666666666 889999999999999999986 568999999 889999998876533 799999999876410
Q ss_pred hhHHhhhcCCCCcceEeecCCC-cCcH
Q 015990 206 LSLFERRKSSSGFAKVVANIPF-NIST 231 (397)
Q Consensus 206 ~~~~~~~~~~~~~d~Vv~NlPy-~i~s 231 (397)
.+..+|+|+++-.. ++..
T Consensus 245 --------~~~~~D~v~~~~vlh~~~~ 263 (352)
T 3mcz_A 245 --------EGGAADVVMLNDCLHYFDA 263 (352)
T ss_dssp --------TTCCEEEEEEESCGGGSCH
T ss_pred --------CCCCccEEEEecccccCCH
Confidence 12458988876544 3443
No 262
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.47 E-value=6.4e-07 Score=88.03 Aligned_cols=80 Identities=15% Similarity=0.252 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCC---ceEEEEccccccchhhhhhhHHhhhcC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASID---QLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~---~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+..+|||||||+|.++..+++. +.+++++|+ +.+++.|++++...+ +++++.+|+.+.... .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-----------F 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-----------C
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-----------C
Confidence 45679999999999999999985 568999999 999999999987543 799999999875200 0
Q ss_pred CCCcceEeecCCC-cCcH
Q 015990 215 SSGFAKVVANIPF-NIST 231 (397)
Q Consensus 215 ~~~~d~Vv~NlPy-~i~s 231 (397)
++.+|+|+.+-.. ++..
T Consensus 246 p~~~D~v~~~~vlh~~~~ 263 (363)
T 3dp7_A 246 PTGFDAVWMSQFLDCFSE 263 (363)
T ss_dssp CCCCSEEEEESCSTTSCH
T ss_pred CCCcCEEEEechhhhCCH
Confidence 1468888775443 3443
No 263
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.43 E-value=3.9e-07 Score=88.24 Aligned_cols=84 Identities=20% Similarity=0.261 Sum_probs=63.4
Q ss_pred HHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhhhhH
Q 015990 134 AAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~~~~ 208 (397)
++.++..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++++... ++++++.+|+.+ +.
T Consensus 162 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~------- 232 (332)
T 3i53_A 162 AAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PL------- 232 (332)
T ss_dssp GGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-------
T ss_pred HHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CC-------
Confidence 33344456789999999999999999985 568999999 99999999987643 479999999973 22
Q ss_pred HhhhcCCCCcceEeecCCC-cCcHH
Q 015990 209 FERRKSSSGFAKVVANIPF-NISTD 232 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~NlPy-~i~s~ 232 (397)
+..+|+|+++-.. ++..+
T Consensus 233 ------p~~~D~v~~~~vlh~~~~~ 251 (332)
T 3i53_A 233 ------PAGAGGYVLSAVLHDWDDL 251 (332)
T ss_dssp ------CCSCSEEEEESCGGGSCHH
T ss_pred ------CCCCcEEEEehhhccCCHH
Confidence 1268888765443 45543
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.43 E-value=4.1e-07 Score=89.25 Aligned_cols=79 Identities=23% Similarity=0.324 Sum_probs=63.2
Q ss_pred CCCEEEEEcCcccHHHHHHHHcC-CcEEEEeCCHHHHHHHHHHhccC----------CceEEEEccccccchhhhhhhHH
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNAG-ATVLAIEKDQHMVGLVRERFASI----------DQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~~-~~V~~vE~d~~~i~~a~~~~~~~----------~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
.+.+||+||||+|.++..+++.+ .+|++||+|+.+++.|++++... ++++++.+|+.++-.. ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~-----~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR-----YA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH-----HH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHh-----hh
Confidence 46799999999999999998875 58999999999999999997521 2699999999886321 00
Q ss_pred hhhcCCCCcceEeecCCC
Q 015990 210 ERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy 227 (397)
. ..+.||+||.|+|.
T Consensus 263 ~---~~~~fDvII~D~~d 277 (364)
T 2qfm_A 263 K---EGREFDYVINDLTA 277 (364)
T ss_dssp H---HTCCEEEEEEECCS
T ss_pred c---cCCCceEEEECCCC
Confidence 0 13679999999865
No 265
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.42 E-value=7.2e-07 Score=80.76 Aligned_cols=73 Identities=21% Similarity=0.339 Sum_probs=58.3
Q ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccC-----CceEEEEccc
Q 015990 123 YMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASI-----DQLKVLQEDF 196 (397)
Q Consensus 123 fl~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~-----~~v~ii~gD~ 196 (397)
..+++...+.+...+ .+.++|||||| |+.|.++++. +++|++||.|++.++.|+++++.. +++++++||+
T Consensus 14 ~~v~~~~~~~L~~~l--~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda 89 (202)
T 3cvo_A 14 LTMPPAEAEALRMAY--EEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDI 89 (202)
T ss_dssp CCSCHHHHHHHHHHH--HHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCC
T ss_pred ccCCHHHHHHHHHHh--hCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCc
Confidence 345666665554433 46789999998 5899999986 789999999999999999998754 3799999998
Q ss_pred ccc
Q 015990 197 VKC 199 (397)
Q Consensus 197 ~~~ 199 (397)
.+.
T Consensus 90 ~~~ 92 (202)
T 3cvo_A 90 GPT 92 (202)
T ss_dssp SSB
T ss_pred hhh
Confidence 764
No 266
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.42 E-value=3.9e-07 Score=82.62 Aligned_cols=66 Identities=21% Similarity=0.290 Sum_probs=55.8
Q ss_pred CCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceE
Q 015990 142 GDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKV 221 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~V 221 (397)
+.+|||||||+|.++..+++. +|+|+++.+++.++++ +++++.+|+.+.++. .+.+|+|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~------------~~~fD~v 106 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR-----GVFVLKGTAENLPLK------------DESFDFA 106 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-----TCEEEECBTTBCCSC------------TTCEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-----CCEEEEcccccCCCC------------CCCeeEE
Confidence 779999999999999998765 9999999999999986 688999999877542 3578999
Q ss_pred eecCCCc
Q 015990 222 VANIPFN 228 (397)
Q Consensus 222 v~NlPy~ 228 (397)
+++-.++
T Consensus 107 ~~~~~l~ 113 (219)
T 1vlm_A 107 LMVTTIC 113 (219)
T ss_dssp EEESCGG
T ss_pred EEcchHh
Confidence 8886543
No 267
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.32 E-value=1.2e-06 Score=83.05 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=63.0
Q ss_pred cCCCHHHHHHHHHHh-cCCCCCEEEEEcCcccH----HHHHHHHc-C-----CcEEEEeCCHHHHHHHHHHhcc------
Q 015990 123 YMLNSEINDQLAAAA-AVQEGDIVLEIGPGTGS----LTNVLLNA-G-----ATVLAIEKDQHMVGLVRERFAS------ 185 (397)
Q Consensus 123 fl~~~~i~~~i~~~~-~~~~~~~VLEIG~G~G~----lt~~La~~-~-----~~V~~vE~d~~~i~~a~~~~~~------ 185 (397)
|..|+...+.+.+.+ +-.++.+|||+|||+|. ++..|++. + .+|+|+|+|++|++.|+++...
T Consensus 86 FfRd~~~f~~l~~~llp~~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~ 165 (274)
T 1af7_A 86 FFREAHHFPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKT 165 (274)
T ss_dssp TTTTTTHHHHHHHHHHHSCSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTT
T ss_pred ccCChHHHHHHHHHccCCCCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhc
Confidence 555555555544432 21245689999999998 66667764 2 4899999999999999987410
Q ss_pred -----------------C----------CceEEEEccccccchhhhhhhHHhhhcCCCCcceEeec
Q 015990 186 -----------------I----------DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVAN 224 (397)
Q Consensus 186 -----------------~----------~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~N 224 (397)
. .++++.++|+.+.++. ..+.+|+|++.
T Consensus 166 ~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~-----------~~~~fDlI~cr 220 (274)
T 1af7_A 166 LSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYN-----------VPGPFDAIFCR 220 (274)
T ss_dssp SCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCC-----------CCCCEEEEEEC
T ss_pred CCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCC-----------cCCCeeEEEEC
Confidence 1 2588999998874331 12578998874
No 268
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.31 E-value=3.7e-07 Score=82.27 Aligned_cols=85 Identities=15% Similarity=0.188 Sum_probs=60.8
Q ss_pred HHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHH
Q 015990 131 DQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 131 ~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
+.+++.+. ..++.+|||||||+|.++..+ +.+|+|+|+++. +++++.+|+.+.++.
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~-------------~~~~~~~d~~~~~~~------- 112 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSI---RNPVHCFDLASL-------------DPRVTVCDMAQVPLE------- 112 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS-------------STTEEESCTTSCSCC-------
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC-------------CceEEEeccccCCCC-------
Confidence 34455443 456789999999999999887 478999999987 467889999886542
Q ss_pred hhhcCCCCcceEeecCCCcCc------HHHHHHhccCCCc
Q 015990 210 ERRKSSSGFAKVVANIPFNIS------TDVIKQLLPMGDI 243 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy~i~------s~il~~L~~~g~~ 243 (397)
.+.+|+|+++..++.. ..+.+.|.++|.+
T Consensus 113 -----~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l 147 (215)
T 2zfu_A 113 -----DESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLL 147 (215)
T ss_dssp -----TTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEE
T ss_pred -----CCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEE
Confidence 3579999988776542 1234455566544
No 269
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.28 E-value=8.4e-07 Score=75.68 Aligned_cols=88 Identities=13% Similarity=0.237 Sum_probs=68.4
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCccc-HHHHHHHH-cCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchh
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTG-SLTNVLLN-AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIR 202 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G-~lt~~La~-~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~ 202 (397)
+++.+++.|.+.. .++++|||||||.| ..+..|++ .|..|+++|+++.+++ ++..|+.+....
T Consensus 21 m~e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~-------------~v~dDiF~P~~~ 85 (153)
T 2k4m_A 21 MWNDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG-------------IVRDDITSPRME 85 (153)
T ss_dssp HHHHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-------------EECCCSSSCCHH
T ss_pred HHHHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-------------eEEccCCCCccc
Confidence 3667777776655 35679999999999 59999997 7899999999987766 788998876442
Q ss_pred hhhhhHHhhhcCCCCcceE-eecCCCcCcHHHHHHhc
Q 015990 203 SHMLSLFERRKSSSGFAKV-VANIPFNISTDVIKQLL 238 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~V-v~NlPy~i~s~il~~L~ 238 (397)
....+|+| --|+|-.+..+|+..-.
T Consensus 86 -----------~Y~~~DLIYsirPP~El~~~i~~lA~ 111 (153)
T 2k4m_A 86 -----------IYRGAALIYSIRPPAEIHSSLMRVAD 111 (153)
T ss_dssp -----------HHTTEEEEEEESCCTTTHHHHHHHHH
T ss_pred -----------ccCCcCEEEEcCCCHHHHHHHHHHHH
Confidence 11468888 78999988888876443
No 270
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.28 E-value=3.5e-06 Score=79.78 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcC-CCCCEEEEEcCcc--cHHHHHHHH---cCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccc
Q 015990 127 SEINDQLAAAAAV-QEGDIVLEIGPGT--GSLTNVLLN---AGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVK 198 (397)
Q Consensus 127 ~~i~~~i~~~~~~-~~~~~VLEIG~G~--G~lt~~La~---~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~ 198 (397)
...+.+.+..+.. ....+|||||||+ |..+..+++ .+++|++||.|+.|++.|++++... ++++++++|+.+
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 3444555665543 3447899999997 334444444 2679999999999999999998764 379999999988
Q ss_pred cc
Q 015990 199 CH 200 (397)
Q Consensus 199 ~~ 200 (397)
..
T Consensus 143 ~~ 144 (277)
T 3giw_A 143 PA 144 (277)
T ss_dssp HH
T ss_pred hh
Confidence 63
No 271
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.17 E-value=4.3e-06 Score=83.04 Aligned_cols=86 Identities=14% Similarity=0.132 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCc------ccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceEEEEcccc
Q 015990 127 SEINDQLAAAAAVQEGDIVLEIGPG------TGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFV 197 (397)
Q Consensus 127 ~~i~~~i~~~~~~~~~~~VLEIG~G------~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~ 197 (397)
...+++++..+. .++.+||||||| +|..+..+++. +++|+|||+++.|. ...++++++++|+.
T Consensus 203 ~~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~~~rI~fv~GDa~ 274 (419)
T 3sso_A 203 TPHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VDELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GCBTTEEEEECCTT
T ss_pred HHHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hcCCCcEEEEeccc
Confidence 366777777655 356899999999 77777777764 67999999999973 12358999999999
Q ss_pred ccchhhhhhhHHhhhcCCCCcceEeecCC
Q 015990 198 KCHIRSHMLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
+.++...+. . ..+.||+|++|.-
T Consensus 275 dlpf~~~l~---~---~d~sFDlVisdgs 297 (419)
T 3sso_A 275 DAEFLDRIA---R---RYGPFDIVIDDGS 297 (419)
T ss_dssp CHHHHHHHH---H---HHCCEEEEEECSC
T ss_pred ccchhhhhh---c---ccCCccEEEECCc
Confidence 876532111 0 1267999999864
No 272
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.17 E-value=2.1e-06 Score=84.62 Aligned_cols=63 Identities=11% Similarity=0.305 Sum_probs=50.7
Q ss_pred HHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccc
Q 015990 131 DQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVK 198 (397)
Q Consensus 131 ~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~ 198 (397)
..+++.++ ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~ 257 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----FSGVEHLGGDMFD 257 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----cCCCEEEecCCCC
Confidence 34444444 566789999999999999999985 568999999 888877654 3689999999986
No 273
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.17 E-value=2.8e-06 Score=81.22 Aligned_cols=73 Identities=18% Similarity=0.241 Sum_probs=53.1
Q ss_pred HHHHHHHh-----cCCCCCEEEEEcC------cccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceEE-EEc
Q 015990 130 NDQLAAAA-----AVQEGDIVLEIGP------GTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKV-LQE 194 (397)
Q Consensus 130 ~~~i~~~~-----~~~~~~~VLEIG~------G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~i-i~g 194 (397)
...+.+.+ .+.++++|||+|| |+|. ..+++. +++|+|+|+++. + .++++ +++
T Consensus 47 y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---~~v~~~i~g 113 (290)
T 2xyq_A 47 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---SDADSTLIG 113 (290)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---CSSSEEEES
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---CCCEEEEEC
Confidence 44454444 5678899999999 5576 334443 468999999998 1 36888 999
Q ss_pred cccccchhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 195 DFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 195 D~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
|+.+.++ .+.||+|++|++.+
T Consensus 114 D~~~~~~-------------~~~fD~Vvsn~~~~ 134 (290)
T 2xyq_A 114 DCATVHT-------------ANKWDLIISDMYDP 134 (290)
T ss_dssp CGGGCCC-------------SSCEEEEEECCCCC
T ss_pred ccccCCc-------------cCcccEEEEcCCcc
Confidence 9987653 25799999997543
No 274
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.14 E-value=2.7e-06 Score=83.77 Aligned_cols=78 Identities=5% Similarity=0.158 Sum_probs=60.2
Q ss_pred HHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHcC--CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh
Q 015990 131 DQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNAG--ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 131 ~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~ 207 (397)
..+++.++ ..++.+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ ++
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~------ 265 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----LSGIEHVGGDMFA-SV------ 265 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT-CC------
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----cCCCEEEeCCccc-CC------
Confidence 45556554 6677899999999999999999874 47888899 999887764 2579999999987 33
Q ss_pred HHhhhcCCCCcceEeecCCCc
Q 015990 208 LFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
+.+|+|+++..++
T Consensus 266 --------~~~D~v~~~~~lh 278 (372)
T 1fp1_D 266 --------PQGDAMILKAVCH 278 (372)
T ss_dssp --------CCEEEEEEESSGG
T ss_pred --------CCCCEEEEecccc
Confidence 1278888775543
No 275
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.12 E-value=4.5e-06 Score=79.79 Aligned_cols=60 Identities=28% Similarity=0.364 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc
Q 015990 125 LNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS 185 (397)
Q Consensus 125 ~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~ 185 (397)
.+..+++.+++... .+++.|||++||+|+++..+++.|.+++|+|+|+.+++.|++++..
T Consensus 220 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 220 FPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp SCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 46788999998877 6889999999999999999999999999999999999999998754
No 276
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.12 E-value=4e-06 Score=81.75 Aligned_cols=84 Identities=21% Similarity=0.311 Sum_probs=59.6
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhcc---CCceEEEEccccccchhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~---~~~v~ii~gD~~~~~~~~~ 204 (397)
...+++.++..++.+|||||||+|.++..+++. +.+++++|+ +.++. +++... .++++++.+|+.+.
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~----- 244 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE----- 244 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC-----
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC-----
Confidence 345667777788889999999999999999986 447899999 44444 333221 24799999999722
Q ss_pred hhhHHhhhcCCCCcceEeecCCC-cCcH
Q 015990 205 MLSLFERRKSSSGFAKVVANIPF-NIST 231 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy-~i~s 231 (397)
.+ .+|+|+++-.+ ++..
T Consensus 245 ---------~p-~~D~v~~~~vlh~~~d 262 (348)
T 3lst_A 245 ---------VP-HADVHVLKRILHNWGD 262 (348)
T ss_dssp ---------CC-CCSEEEEESCGGGSCH
T ss_pred ---------CC-CCcEEEEehhccCCCH
Confidence 12 68888776554 3444
No 277
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.11 E-value=3.2e-06 Score=82.52 Aligned_cols=74 Identities=12% Similarity=0.290 Sum_probs=57.6
Q ss_pred cCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 138 AVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 138 ~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
...++.+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ++++++.+|+.+ ++
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~-------------- 244 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----NNLTYVGGDMFT-SI-------------- 244 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----TTEEEEECCTTT-CC--------------
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----CCcEEEeccccC-CC--------------
Confidence 3456789999999999999999986 568999999 9998877652 469999999976 32
Q ss_pred CCcceEeecCCCc-CcH
Q 015990 216 SGFAKVVANIPFN-IST 231 (397)
Q Consensus 216 ~~~d~Vv~NlPy~-i~s 231 (397)
+.+|+|+++..++ +..
T Consensus 245 p~~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 245 PNADAVLLKYILHNWTD 261 (352)
T ss_dssp CCCSEEEEESCGGGSCH
T ss_pred CCccEEEeehhhccCCH
Confidence 2378888765543 443
No 278
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.09 E-value=4.8e-06 Score=81.94 Aligned_cols=64 Identities=11% Similarity=0.214 Sum_probs=52.5
Q ss_pred HHHHHHHhc-CCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccc
Q 015990 130 NDQLAAAAA-VQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVK 198 (397)
Q Consensus 130 ~~~i~~~~~-~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~ 198 (397)
...+++.+. ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~D~~~ 255 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----FPGVTHVGGDMFK 255 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----cCCeEEEeCCcCC
Confidence 445666665 667789999999999999999985 568999999 888877654 3689999999987
No 279
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.06 E-value=1.8e-05 Score=77.52 Aligned_cols=87 Identities=15% Similarity=0.267 Sum_probs=64.4
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhh
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~ 206 (397)
..+++..+..+..+|+|||||+|.++..++++ ..+++..|. +.+++.|+++.... ++++++.+|+.+.+.
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~----- 242 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL----- 242 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-----
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-----
Confidence 45556666677789999999999999999997 447777886 88999999887543 489999999976532
Q ss_pred hHHhhhcCCCCcceE-eecCCCcCcHH
Q 015990 207 SLFERRKSSSGFAKV-VANIPFNISTD 232 (397)
Q Consensus 207 ~~~~~~~~~~~~d~V-v~NlPy~i~s~ 232 (397)
+..|++ +.+.-.+++.+
T Consensus 243 ---------~~~D~~~~~~vlh~~~d~ 260 (353)
T 4a6d_A 243 ---------PEADLYILARVLHDWADG 260 (353)
T ss_dssp ---------CCCSEEEEESSGGGSCHH
T ss_pred ---------CCceEEEeeeecccCCHH
Confidence 234654 45555556554
No 280
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.02 E-value=6.4e-07 Score=84.80 Aligned_cols=81 Identities=11% Similarity=0.006 Sum_probs=66.6
Q ss_pred CCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceE
Q 015990 142 GDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKV 221 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~V 221 (397)
+..+||+.||+|.++..++..+.+++.||.++..++.+++|++..++++++.+|+.+.-.. +. ....++|+|
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~-----l~---~~~~~fdLV 163 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNA-----LL---PPPEKRGLI 163 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHH-----HC---SCTTSCEEE
T ss_pred CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHH-----hc---CCCCCccEE
Confidence 4569999999999999999988899999999999999999998766899999998664210 00 022469999
Q ss_pred eecCCCcCc
Q 015990 222 VANIPFNIS 230 (397)
Q Consensus 222 v~NlPy~i~ 230 (397)
+.+|||...
T Consensus 164 fiDPPYe~k 172 (283)
T 2oo3_A 164 FIDPSYERK 172 (283)
T ss_dssp EECCCCCST
T ss_pred EECCCCCCC
Confidence 999999853
No 281
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.96 E-value=6.1e-06 Score=80.69 Aligned_cols=80 Identities=15% Similarity=0.279 Sum_probs=59.7
Q ss_pred HHHHHh--cCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh
Q 015990 132 QLAAAA--AVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS 207 (397)
Q Consensus 132 ~i~~~~--~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~ 207 (397)
.+++.. ...++.+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ ++
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~------ 249 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----NENLNFVGGDMFK-SI------ 249 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----CSSEEEEECCTTT-CC------
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----CCCcEEEeCccCC-CC------
Confidence 344444 3456689999999999999999987 458999999 788876654 2469999999987 42
Q ss_pred HHhhhcCCCCcceEeecCCCc-CcH
Q 015990 208 LFERRKSSSGFAKVVANIPFN-IST 231 (397)
Q Consensus 208 ~~~~~~~~~~~d~Vv~NlPy~-i~s 231 (397)
+.+|+|+++..++ +..
T Consensus 250 --------~~~D~v~~~~vlh~~~d 266 (358)
T 1zg3_A 250 --------PSADAVLLKWVLHDWND 266 (358)
T ss_dssp --------CCCSEEEEESCGGGSCH
T ss_pred --------CCceEEEEcccccCCCH
Confidence 2478888876654 443
No 282
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.95 E-value=1.8e-05 Score=76.55 Aligned_cols=97 Identities=11% Similarity=0.245 Sum_probs=75.0
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc---CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA---GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCH 200 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~ 200 (397)
..-|.+++.+++.+.+++++.++|..||.|.-|..+++. .++|+|+|.|+.+++.++ ++. .++++++++++.++.
T Consensus 40 ~H~pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~-~~Rv~lv~~nF~~l~ 117 (347)
T 3tka_A 40 KHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID-DPRFSIIHGPFSALG 117 (347)
T ss_dssp --CCTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC-CTTEEEEESCGGGHH
T ss_pred CcccccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc-CCcEEEEeCCHHHHH
Confidence 344567888999999999999999999999999999986 358999999999999995 553 358999999998874
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
. .+......+.+|.|+.||.+.
T Consensus 118 ~------~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 118 E------YVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp H------HHHHTTCTTCEEEEEEECSCC
T ss_pred H------HHHhcCCCCcccEEEECCccC
Confidence 2 111100112589999999864
No 283
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.90 E-value=8.7e-06 Score=85.43 Aligned_cols=71 Identities=20% Similarity=0.314 Sum_probs=52.7
Q ss_pred CCCEEEEEcCcccHHHHHHHH---cC-C--cEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhhhhHHhh
Q 015990 141 EGDIVLEIGPGTGSLTNVLLN---AG-A--TVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~---~~-~--~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
++..|||+|||+|.|....++ ++ . +|+|||.++ ++..+++....+ ++|++++||+.++.++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP--------- 426 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP--------- 426 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS---------
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC---------
Confidence 345799999999999544433 32 2 689999997 555666665443 3899999999998653
Q ss_pred hcCCCCcceEeecC
Q 015990 212 RKSSSGFAKVVANI 225 (397)
Q Consensus 212 ~~~~~~~d~Vv~Nl 225 (397)
++.|+||+-+
T Consensus 427 ----EKVDIIVSEw 436 (637)
T 4gqb_A 427 ----EKADIIVSEL 436 (637)
T ss_dssp ----SCEEEEECCC
T ss_pred ----cccCEEEEEc
Confidence 6789998763
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.89 E-value=2.7e-05 Score=76.43 Aligned_cols=74 Identities=19% Similarity=0.241 Sum_probs=59.3
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
+.+|.+|||+||++|..|..+++++++|+|||+.+ |-.. +...++|+++++|+.+..+. ...+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~~----l~~~~~V~~~~~d~~~~~~~------------~~~~ 271 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQS----LMDTGQVTWLREDGFKFRPT------------RSNI 271 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCHH----HHTTTCEEEECSCTTTCCCC------------SSCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cChh----hccCCCeEEEeCccccccCC------------CCCc
Confidence 56899999999999999999999999999999753 2222 23347999999999887642 2579
Q ss_pred ceEeecCCCcC
Q 015990 219 AKVVANIPFNI 229 (397)
Q Consensus 219 d~Vv~NlPy~i 229 (397)
|+|++++-.+.
T Consensus 272 D~vvsDm~~~p 282 (375)
T 4auk_A 272 SWMVCDMVEKP 282 (375)
T ss_dssp EEEEECCSSCH
T ss_pred CEEEEcCCCCh
Confidence 99999986653
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.84 E-value=0.0001 Score=70.24 Aligned_cols=92 Identities=18% Similarity=0.253 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHh---cCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhc-------cCCceEEE
Q 015990 125 LNSEINDQLAAAA---AVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFA-------SIDQLKVL 192 (397)
Q Consensus 125 ~~~~i~~~i~~~~---~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~-------~~~~v~ii 192 (397)
.|+.++..++... .....++||=||-|.|...+.+++. ..+|+.||+|+..++.+++.+. ..++++++
T Consensus 64 ~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~ 143 (294)
T 3o4f_A 64 RDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV 143 (294)
T ss_dssp TTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE
T ss_pred ccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEE
Confidence 3566666655433 2345679999999999999999986 4689999999999999998763 23699999
Q ss_pred EccccccchhhhhhhHHhhhcCCCCcceEeecCCC
Q 015990 193 QEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 193 ~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
.+|+.++--. ..+.+|+|+.+++-
T Consensus 144 ~~Dg~~~l~~-----------~~~~yDvIi~D~~d 167 (294)
T 3o4f_A 144 IDDGVNFVNQ-----------TSQTFDVIISDCTD 167 (294)
T ss_dssp ESCTTTTTSC-----------SSCCEEEEEESCCC
T ss_pred echHHHHHhh-----------ccccCCEEEEeCCC
Confidence 9999887321 34689999999753
No 286
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.79 E-value=4.7e-05 Score=71.25 Aligned_cols=61 Identities=15% Similarity=0.221 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS 185 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~ 185 (397)
..+..+++.+++... .+++.|||.+||+|+.+....+.|.+++|+|+++.+++.+++++..
T Consensus 196 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 196 PKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Confidence 356788999998775 7889999999999999999999999999999999999999999864
No 287
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.78 E-value=2.4e-05 Score=76.90 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=71.1
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCC--cEEEEeCCHHHHHHHHHHhccC--------CceEEEEccccccc
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGA--TVLAIEKDQHMVGLVRERFASI--------DQLKVLQEDFVKCH 200 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~~vE~d~~~i~~a~~~~~~~--------~~v~ii~gD~~~~~ 200 (397)
...+..+++++|++|||+.+|.|.=|..|++.+. .|+++|+|+..++.+++++... .++.+...|+..+.
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc
Confidence 3455667899999999999999999999998754 7999999999999999887532 37899999998764
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecCCCc
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.. ..+.||.|+.+.|=.
T Consensus 218 ~~-----------~~~~fD~VLlDaPCS 234 (359)
T 4fzv_A 218 EL-----------EGDTYDRVLVDVPCT 234 (359)
T ss_dssp HH-----------STTCEEEEEEECCCC
T ss_pred hh-----------ccccCCEEEECCccC
Confidence 31 346899999999953
No 288
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.74 E-value=5e-05 Score=80.01 Aligned_cols=78 Identities=9% Similarity=0.177 Sum_probs=55.1
Q ss_pred CCEEEEEcCcccHHHHHH---HH-cC-----------CcEEEEeCCHHHHHHHHHHhc-cC-CceEEEEccccccchhhh
Q 015990 142 GDIVLEIGPGTGSLTNVL---LN-AG-----------ATVLAIEKDQHMVGLVRERFA-SI-DQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~L---a~-~~-----------~~V~~vE~d~~~i~~a~~~~~-~~-~~v~ii~gD~~~~~~~~~ 204 (397)
+..|||+|||+|.|+... ++ .+ .+|+|||.++.++..++.... .. +.|+++++|+.++.+...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 458999999999997433 22 12 299999999987766665543 22 379999999999865200
Q ss_pred hhhHHhhhcCCCCcceEeecCC
Q 015990 205 MLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
. ...++.|+||+-+.
T Consensus 490 -----~--~~~ekVDIIVSElm 504 (745)
T 3ua3_A 490 -----D--RGFEQPDIIVSELL 504 (745)
T ss_dssp -----H--TTCCCCSEEEECCC
T ss_pred -----c--CCCCcccEEEEecc
Confidence 0 02468899998865
No 289
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.71 E-value=1.9e-05 Score=68.79 Aligned_cols=82 Identities=13% Similarity=0.191 Sum_probs=59.1
Q ss_pred hcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 137 AAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 137 ~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
+++.+|++|||+|||. +++|+++.|++.|+++... +++++++|+.++++.. ...+
T Consensus 8 ~g~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~--~~~~~~~d~~~~~~~~---------~~~~ 62 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN--EGRVSVENIKQLLQSA---------HKES 62 (176)
T ss_dssp TTCCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT--TSEEEEEEGGGGGGGC---------CCSS
T ss_pred cCCCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc--CcEEEEechhcCcccc---------CCCC
Confidence 4678899999999996 2399999999999998753 5899999998875410 0236
Q ss_pred CcceEeecCCCcCc--------HHHHHHhccCCCc
Q 015990 217 GFAKVVANIPFNIS--------TDVIKQLLPMGDI 243 (397)
Q Consensus 217 ~~d~Vv~NlPy~i~--------s~il~~L~~~g~~ 243 (397)
.||+|+++..++.. ..+.+.|+++|.+
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l 97 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCL 97 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEE
Confidence 79999997655432 2344555566544
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.46 E-value=8.4e-05 Score=69.65 Aligned_cols=97 Identities=18% Similarity=0.094 Sum_probs=59.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc-------C-------CcEEEEeCCH--------------HHHHHHHHHhcc------
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA-------G-------ATVLAIEKDQ--------------HMVGLVRERFAS------ 185 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~-------~-------~~V~~vE~d~--------------~~i~~a~~~~~~------ 185 (397)
.++.+|||||+|+|+.+..+++. + .+++++|.++ ++.+.+++.+..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35579999999999998876542 1 3899999886 333456665432
Q ss_pred --------C--CceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecC--CC----cCcHH----HHHHhccCCCc
Q 015990 186 --------I--DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANI--PF----NISTD----VIKQLLPMGDI 243 (397)
Q Consensus 186 --------~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~Nl--Py----~i~s~----il~~L~~~g~~ 243 (397)
. .+++++.||+.+.-.. +.. .....+|.|+.+. |- -++.+ +.+.|.++|.+
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~-----~~~--~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l 209 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQ-----LDD--SLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTL 209 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGG-----SCG--GGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhh-----ccc--ccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEE
Confidence 1 2688999999875211 000 0012689999874 32 13443 34455566544
No 291
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.45 E-value=0.00013 Score=71.24 Aligned_cols=73 Identities=19% Similarity=0.291 Sum_probs=58.8
Q ss_pred CEEEEEcCcccHHHHHHHHcC--C-cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcc
Q 015990 143 DIVLEIGPGTGSLTNVLLNAG--A-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~~--~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d 219 (397)
.+|+|+.||.|.++..+.+.| . .|.++|+|+.+++..+.|+. +..++++|+.++...+. . ...+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---~~~~~~~Di~~~~~~~~-----~----~~~~D 70 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---HTQLLAKTIEGITLEEF-----D----RLSFD 70 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---TSCEECSCGGGCCHHHH-----H----HHCCS
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---ccccccCCHHHccHhHc-----C----cCCcC
Confidence 479999999999999999987 3 58999999999999999974 44578899998754321 0 12589
Q ss_pred eEeecCCC
Q 015990 220 KVVANIPF 227 (397)
Q Consensus 220 ~Vv~NlPy 227 (397)
+|++++|.
T Consensus 71 ~l~~gpPC 78 (343)
T 1g55_A 71 MILMSPPC 78 (343)
T ss_dssp EEEECCC-
T ss_pred EEEEcCCC
Confidence 99999993
No 292
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.42 E-value=0.00043 Score=67.05 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=58.3
Q ss_pred CCEEEEEcCcccHHHHHHHHcCCc-EEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcce
Q 015990 142 GDIVLEIGPGTGSLTNVLLNAGAT-VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~~~~-V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~ 220 (397)
+-+|+|+.||.|.++..+.+.|.+ |.++|+|+.+++..+.|+.... ++|+.++...+ ...+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~-----~~Di~~~~~~~-----------~~~~D~ 74 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP-----EGDITQVNEKT-----------IPDHDI 74 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC-----BSCGGGSCGGG-----------SCCCSE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC-----cCCHHHcCHhh-----------CCCCCE
Confidence 468999999999999999998874 7799999999999999985422 68988875431 245899
Q ss_pred EeecCCCc
Q 015990 221 VVANIPFN 228 (397)
Q Consensus 221 Vv~NlPy~ 228 (397)
|++++|++
T Consensus 75 l~~gpPCQ 82 (327)
T 2c7p_A 75 LCAGFPCQ 82 (327)
T ss_dssp EEEECCCT
T ss_pred EEECCCCC
Confidence 99999974
No 293
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.42 E-value=0.0003 Score=69.47 Aligned_cols=77 Identities=22% Similarity=0.214 Sum_probs=61.1
Q ss_pred CEEEEEcCcccHHHHHHHHcCCc-EEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceE
Q 015990 143 DIVLEIGPGTGSLTNVLLNAGAT-VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKV 221 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~~~~-V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~V 221 (397)
-+|+|+.||.|.++..+.+.|.+ |.++|+|+.+++..+.|+ ++..++++|+.++...+..... .....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~---~~~~~~~~DI~~~~~~~~~~~~----~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF---PRSLHVQEDVSLLNAEIIKGFF----KNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC---TTSEEECCCGGGCCHHHHHHHH----CSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC---CCCceEecChhhcCHHHHHhhc----ccCCCeeEE
Confidence 47999999999999999999885 669999999999999886 4677899999988654321100 123578999
Q ss_pred eecCC
Q 015990 222 VANIP 226 (397)
Q Consensus 222 v~NlP 226 (397)
++.+|
T Consensus 76 ~ggpP 80 (376)
T 3g7u_A 76 IGGPP 80 (376)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 99999
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.23 E-value=0.00066 Score=66.79 Aligned_cols=78 Identities=22% Similarity=0.298 Sum_probs=61.1
Q ss_pred CCCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhcc----------CCceEEEEccccccchhhhhhhHH
Q 015990 141 EGDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFAS----------IDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~----------~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
++++||=||-|.|...+.+++. ..+|+.||+|+..++.+++.+.. .++++++.+|+.++-- +..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~-----~~~ 279 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLK-----RYA 279 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHH-----HHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHH-----hhh
Confidence 4679999999999999999986 55899999999999999998642 1368999999987621 111
Q ss_pred hhhcCCCCcceEeecCC
Q 015990 210 ERRKSSSGFAKVVANIP 226 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlP 226 (397)
+ ....+|+|+.+++
T Consensus 280 ~---~~~~yDvIIvDl~ 293 (381)
T 3c6k_A 280 K---EGREFDYVINDLT 293 (381)
T ss_dssp H---HTCCEEEEEEECC
T ss_pred h---ccCceeEEEECCC
Confidence 1 2357999999864
No 295
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.04 E-value=0.0021 Score=61.35 Aligned_cols=77 Identities=18% Similarity=0.127 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcE---EEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATV---LAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V---~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
..+-+|+|+.||.|.++..+.+.|.++ .++|+|+.+++..+.|+ ++..++.+|+.++...+. . ..+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~---~~~~~~~~DI~~i~~~~i-----~---~~~ 82 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH---QGKIMYVGDVRSVTQKHI-----Q---EWG 82 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT---TTCEEEECCGGGCCHHHH-----H---HTC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC---CCCceeCCChHHccHHHh-----c---ccC
Confidence 345689999999999999999888754 89999999999888886 345688999998865421 1 114
Q ss_pred CcceEeecCCC
Q 015990 217 GFAKVVANIPF 227 (397)
Q Consensus 217 ~~d~Vv~NlPy 227 (397)
.+|++++.+|.
T Consensus 83 ~~Dll~ggpPC 93 (295)
T 2qrv_A 83 PFDLVIGGSPC 93 (295)
T ss_dssp CCSEEEECCCC
T ss_pred CcCEEEecCCC
Confidence 68999999985
No 296
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.94 E-value=0.00038 Score=67.22 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccc
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVK 198 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~ 198 (397)
..+..+++.+++.. ..+++.|||..||+|+.+....+.|.+.+|+|+++..++.+++++...+ ..+.+.+|+.+
T Consensus 236 ~kp~~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 310 (323)
T 1boo_A 236 RFPAKLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNR 310 (323)
T ss_dssp CCCTHHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 35578889998776 4788999999999999999988899999999999999999999987543 23333444433
No 297
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.86 E-value=0.0016 Score=63.06 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=57.6
Q ss_pred CCEEEEEcCcccHHHHHHHHcCC--c-E-EEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 142 GDIVLEIGPGTGSLTNVLLNAGA--T-V-LAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~~~--~-V-~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.-+|+|+.||.|.++..+.+.|. + | .++|+|+.+++..+.|+... ++++|+.+++..+. . ...
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----~~~~DI~~~~~~~i-----~----~~~ 76 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----VQVKNLDSISIKQI-----E----SLN 76 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----CBCCCTTTCCHHHH-----H----HTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----cccCChhhcCHHHh-----c----cCC
Confidence 34899999999999999998873 4 5 69999999999999998532 67899988865421 1 125
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
+|++++.+|
T Consensus 77 ~Dil~ggpP 85 (327)
T 3qv2_A 77 CNTWFMSPP 85 (327)
T ss_dssp CCEEEECCC
T ss_pred CCEEEecCC
Confidence 899999999
No 298
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.80 E-value=0.0016 Score=63.17 Aligned_cols=72 Identities=14% Similarity=0.260 Sum_probs=57.7
Q ss_pred CEEEEEcCcccHHHHHHHHcCC---cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcc
Q 015990 143 DIVLEIGPGTGSLTNVLLNAGA---TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~~~---~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d 219 (397)
-+++|+.||.|.++..+.+.|. .|.++|+|+.+++..+.|+. +..++.+|+.++...+. ....+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~---~~~~~~~DI~~~~~~~~---------~~~~~D 71 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP---ETNLLNRNIQQLTPQVI---------KKWNVD 71 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---TSCEECCCGGGCCHHHH---------HHTTCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC---CCceeccccccCCHHHh---------ccCCCC
Confidence 3799999999999999988874 47899999999999999874 44577899998865421 112579
Q ss_pred eEeecCC
Q 015990 220 KVVANIP 226 (397)
Q Consensus 220 ~Vv~NlP 226 (397)
++++.+|
T Consensus 72 ~l~ggpP 78 (333)
T 4h0n_A 72 TILMSPP 78 (333)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9999988
No 299
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.77 E-value=0.0027 Score=60.95 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=57.1
Q ss_pred EEEEEcCcccHHHHHHHHcCCc-EEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcceEe
Q 015990 144 IVLEIGPGTGSLTNVLLNAGAT-VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVV 222 (397)
Q Consensus 144 ~VLEIG~G~G~lt~~La~~~~~-V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv 222 (397)
+|||+.||.|.++..+.+.|.+ |.++|+|+.+++..+.|+. -+++.+|+.+++..+ .+..|+++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~----~~~~~~DI~~i~~~~-----------~~~~D~l~ 66 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS----AKLIKGDISKISSDE-----------FPKCDGII 66 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC----SEEEESCGGGCCGGG-----------SCCCSEEE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC----CCcccCChhhCCHhh-----------CCcccEEE
Confidence 6999999999999999888875 6699999999999998863 367899999886542 24689999
Q ss_pred ecCC
Q 015990 223 ANIP 226 (397)
Q Consensus 223 ~NlP 226 (397)
+.+|
T Consensus 67 ggpP 70 (331)
T 3ubt_Y 67 GGPP 70 (331)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 9998
No 300
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.72 E-value=0.00054 Score=64.35 Aligned_cols=84 Identities=10% Similarity=0.070 Sum_probs=53.0
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHHHHHHHHHHhccCC-ceEEEEccccccchhhhhhhH
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASID-QLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~~i~~a~~~~~~~~-~v~ii~gD~~~~~~~~~~~~~ 208 (397)
.|.+...++++.+|||+|||+|..+..+++. + ..|+|+|+..++....... ...+ ++..+.+|+....+
T Consensus 65 ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~~ii~~~~~~dv~~l------- 136 (277)
T 3evf_A 65 WFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGWNIITFKDKTDIHRL------- 136 (277)
T ss_dssp HHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTGGGEEEECSCCTTTS-------
T ss_pred HHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCCCeEEEeccceehhc-------
Confidence 4444445678889999999999999998875 3 3788888874431000000 0011 55556666532222
Q ss_pred HhhhcCCCCcceEeecCCCc
Q 015990 209 FERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~NlPy~ 228 (397)
.+..+|+|++|+..+
T Consensus 137 -----~~~~~DlVlsD~apn 151 (277)
T 3evf_A 137 -----EPVKCDTLLCDIGES 151 (277)
T ss_dssp -----CCCCCSEEEECCCCC
T ss_pred -----CCCCccEEEecCccC
Confidence 346799999998666
No 301
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.71 E-value=0.0006 Score=64.18 Aligned_cols=86 Identities=13% Similarity=0.047 Sum_probs=52.5
Q ss_pred HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhH
Q 015990 131 DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 131 ~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~ 208 (397)
..|.+...+.++.+|||+|||+|..+..+++. + ..|+|+|+..++...+........++..+..++.-..+
T Consensus 80 ~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l------- 152 (282)
T 3gcz_A 80 RWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNM------- 152 (282)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGS-------
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhc-------
Confidence 34444456778889999999999999998864 3 37999998765321111100001133333332211111
Q ss_pred HhhhcCCCCcceEeecCCCc
Q 015990 209 FERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~NlPy~ 228 (397)
....+|+|++++..+
T Consensus 153 -----~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 153 -----EVIPGDTLLCDIGES 167 (282)
T ss_dssp -----CCCCCSEEEECCCCC
T ss_pred -----CCCCcCEEEecCccC
Confidence 346799999998777
No 302
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.52 E-value=0.0048 Score=56.62 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=58.9
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHHHHH--HHHHHhccCCceEEEEc-cccccchhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQHMVG--LVRERFASIDQLKVLQE-DFVKCHIRSH 204 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~~i~--~a~~~~~~~~~v~ii~g-D~~~~~~~~~ 204 (397)
+..|.+...+.++.+|||+||++|..+...+.. + .+|+|+|+-..=.+ ...+.+ ..+.+++..+ |+....
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~-gwn~v~fk~gvDv~~~~---- 141 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTY-GWNIVKLMSGKDVFYLP---- 141 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCT-TTTSEEEECSCCGGGCC----
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhc-CcCceEEEeccceeecC----
Confidence 445566667788999999999999999988875 4 37999998543210 000011 1247899999 986553
Q ss_pred hhhHHhhhcCCCCcceEeecCCCcCc
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFNIS 230 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~i~ 230 (397)
..++|.|++++--.-+
T Consensus 142 ----------~~~~DtllcDIgeSs~ 157 (267)
T 3p8z_A 142 ----------PEKCDTLLCDIGESSP 157 (267)
T ss_dssp ----------CCCCSEEEECCCCCCS
T ss_pred ----------CccccEEEEecCCCCC
Confidence 2568999999865433
No 303
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.49 E-value=0.0043 Score=59.72 Aligned_cols=63 Identities=14% Similarity=0.200 Sum_probs=53.7
Q ss_pred CCCHHHHHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCCH---HHHHHHHHHhccCC
Q 015990 124 MLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQ---HMVGLVRERFASID 187 (397)
Q Consensus 124 l~~~~i~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~---~~i~~a~~~~~~~~ 187 (397)
..+..+++.++.... .+++.|||..||+|+.+....+.|.+.+|+|+++ ..++.+++++...+
T Consensus 226 ~kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 226 QKPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 356889999998764 6889999999999999999999999999999999 99999999986543
No 304
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.46 E-value=0.0075 Score=57.06 Aligned_cols=77 Identities=17% Similarity=0.098 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHHc-------CCcEEEEeCCHH--------------------------HHHHHHHHhccC
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNA-------GATVLAIEKDQH--------------------------MVGLVRERFASI 186 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~-------~~~V~~vE~d~~--------------------------~i~~a~~~~~~~ 186 (397)
..+..|||+|+..|+.+..++.. +.+|+++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34568999999999999988752 568999996421 356778887643
Q ss_pred ----CceEEEEccccccchhhhhhhHHhhhcCCCCcceEeecCC
Q 015990 187 ----DQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 187 ----~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
++++++.||+.+.-.. ....++|.|.-+--
T Consensus 185 gl~~~~I~li~Gda~etL~~----------~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPT----------APIDTLAVLRMDGD 218 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTT----------CCCCCEEEEEECCC
T ss_pred CCCcCceEEEEeCHHHHHhh----------CCCCCEEEEEEcCC
Confidence 5899999999775321 02356888886653
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.41 E-value=0.0048 Score=61.43 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=49.0
Q ss_pred CCCCCEEEEEcCcccHHHHHHH-HcC---CcEEEEeCCHHHHHHHHHHhcc-----C-CceEEEEcccc
Q 015990 139 VQEGDIVLEIGPGTGSLTNVLL-NAG---ATVLAIEKDQHMVGLVRERFAS-----I-DQLKVLQEDFV 197 (397)
Q Consensus 139 ~~~~~~VLEIG~G~G~lt~~La-~~~---~~V~~vE~d~~~i~~a~~~~~~-----~-~~v~ii~gD~~ 197 (397)
+.+++.|+|||++.|..+..++ +.+ ++|+++|.++...+.+++++.. . ++++++..-+.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 4688999999999999999988 432 6899999999999999999875 2 57777765543
No 306
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.39 E-value=0.0039 Score=63.41 Aligned_cols=82 Identities=13% Similarity=0.184 Sum_probs=60.9
Q ss_pred CEEEEEcCcccHHHHHHHHcCCc-EEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhh-------hhhHHhhhcC
Q 015990 143 DIVLEIGPGTGSLTNVLLNAGAT-VLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSH-------MLSLFERRKS 214 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~~~~-V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~-------~~~~~~~~~~ 214 (397)
-+++|+.||.|.++..+.+.|.+ |.++|+|+.+++..+.|+...++..++.+|+.++...+. ....+.. .
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~--~ 166 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ--H 166 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH--H
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh--c
Confidence 48999999999999999888775 789999999999999998544556778899988753210 0000000 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+.+|++++.+|
T Consensus 167 ~~~~Dvl~gGpP 178 (482)
T 3me5_A 167 IPEHDVLLAGFP 178 (482)
T ss_dssp SCCCSEEEEECC
T ss_pred CCCCCEEEecCC
Confidence 246899999998
No 307
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.29 E-value=0.0044 Score=58.59 Aligned_cols=83 Identities=12% Similarity=0.091 Sum_probs=55.9
Q ss_pred HHHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-CC-cEEEEeCCHHHHH--HHHHHhccCCceEEEEc-cccccchhhh
Q 015990 130 NDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-GA-TVLAIEKDQHMVG--LVRERFASIDQLKVLQE-DFVKCHIRSH 204 (397)
Q Consensus 130 ~~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~-~V~~vE~d~~~i~--~a~~~~~~~~~v~ii~g-D~~~~~~~~~ 204 (397)
+..|.+...+.++..|||+||++|..+..++.. +. +|+|+|+-..=.+ ..-+.+ ..+-++++.+ |+..++
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql-~w~lV~~~~~~Dv~~l~---- 157 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSY-GWNIVTMKSGVDVFYRP---- 157 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBT-TGGGEEEECSCCTTSSC----
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhc-CCcceEEEeccCHhhCC----
Confidence 455666666788899999999999999988775 44 7999998643110 000001 0124778887 876653
Q ss_pred hhhHHhhhcCCCCcceEeecCCC
Q 015990 205 MLSLFERRKSSSGFAKVVANIPF 227 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy 227 (397)
+..+|.|++++--
T Consensus 158 ----------~~~~D~ivcDige 170 (321)
T 3lkz_A 158 ----------SECCDTLLCDIGE 170 (321)
T ss_dssp ----------CCCCSEEEECCCC
T ss_pred ----------CCCCCEEEEECcc
Confidence 2468999999873
No 308
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.75 E-value=0.03 Score=55.04 Aligned_cols=91 Identities=10% Similarity=0.140 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCC-----CCEEEEEcCcccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc----CCceEEEEcccccc
Q 015990 129 INDQLAAAAAVQE-----GDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFAS----IDQLKVLQEDFVKC 199 (397)
Q Consensus 129 i~~~i~~~~~~~~-----~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~----~~~v~ii~gD~~~~ 199 (397)
+++..++.+.... +.+|+|+|||+|..|..+... +++.+++.... .+.++++..|...-
T Consensus 35 ~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~------------ii~~i~~~~~~~~~~~pe~~v~~nDLp~N 102 (374)
T 3b5i_A 35 LLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDF------------IVKHISKRFDAAGIDPPEFTAFFSDLPSN 102 (374)
T ss_dssp HHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHH------------HHHHHHHHHHHTTCCCCCEEEEEEECTTS
T ss_pred HHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHH------------HHHHHHHHHhhcCCCCCceeEEecCCCcc
Confidence 3344445444432 468999999999999998765 45544444321 24688888776665
Q ss_pred chhhhhhhHHh------------------------------hhcCCCCcceEeecCCCcCcH
Q 015990 200 HIRSHMLSLFE------------------------------RRKSSSGFAKVVANIPFNIST 231 (397)
Q Consensus 200 ~~~~~~~~~~~------------------------------~~~~~~~~d~Vv~NlPy~i~s 231 (397)
++..+|..+.. .......+|+|++|...+|.+
T Consensus 103 DFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls 164 (374)
T 3b5i_A 103 DFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLS 164 (374)
T ss_dssp CHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred chHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeec
Confidence 54332221110 001246789999998888755
No 309
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.47 E-value=0.0075 Score=55.99 Aligned_cols=80 Identities=15% Similarity=0.013 Sum_probs=49.2
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHc--CCcEEEEeCCHHHHHHHHHHhccC-Cce---EEEEc-cccccchhhh
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA--GATVLAIEKDQHMVGLVRERFASI-DQL---KVLQE-DFVKCHIRSH 204 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~~vE~d~~~i~~a~~~~~~~-~~v---~ii~g-D~~~~~~~~~ 204 (397)
.|-+.--++++.+|||+||+.|.-+..++++ ...|.|..+-.+. . .. -.... .++ ++.++ |+.+..
T Consensus 64 EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~-P~~~~~~Gv~~i~~~~G~Df~~~~---- 136 (269)
T 2px2_A 64 WLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EE-PMLMQSYGWNIVTMKSGVDVFYKP---- 136 (269)
T ss_dssp HHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CC-CCCCCSTTGGGEEEECSCCGGGSC----
T ss_pred HHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cC-CCcccCCCceEEEeeccCCccCCC----
Confidence 3444434678999999999999999999987 3233444433221 0 00 01101 233 55557 988752
Q ss_pred hhhHHhhhcCCCCcceEeecCCCc
Q 015990 205 MLSLFERRKSSSGFAKVVANIPFN 228 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlPy~ 228 (397)
+.++|+|++++.-+
T Consensus 137 ----------~~~~DvVLSDMAPn 150 (269)
T 2px2_A 137 ----------SEISDTLLCDIGES 150 (269)
T ss_dssp ----------CCCCSEEEECCCCC
T ss_pred ----------CCCCCEEEeCCCCC
Confidence 34789999998555
No 310
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=94.90 E-value=0.016 Score=54.81 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=33.1
Q ss_pred HHHHHhcCCCCCEEEEEcCcccHHHHHHHHc-C-CcEEEEeCCHH
Q 015990 132 QLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA-G-ATVLAIEKDQH 174 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~-~-~~V~~vE~d~~ 174 (397)
.|.+.--+.++.+|||+|||+|..+..+++. + ..|+|+|+...
T Consensus 72 ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 72 WLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE 116 (300)
T ss_dssp HHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred HHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc
Confidence 3444423457889999999999999999985 3 37999998653
No 311
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.09 E-value=0.23 Score=48.85 Aligned_cols=71 Identities=23% Similarity=0.269 Sum_probs=47.1
Q ss_pred ccCCCHHHH--------HHHHHH---hcCCCCCEEEEEcCcccHHHHHHHHc---------CCcEEEEeCCHHHHHHHHH
Q 015990 122 HYMLNSEIN--------DQLAAA---AAVQEGDIVLEIGPGTGSLTNVLLNA---------GATVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 122 nfl~~~~i~--------~~i~~~---~~~~~~~~VLEIG~G~G~lt~~La~~---------~~~V~~vE~d~~~i~~a~~ 181 (397)
.|++.|++- .++++. +....+-.|+|+|+|.|.++.-+++. ..+++.||+|+.+.+.=++
T Consensus 50 DF~Tapeis~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~ 129 (387)
T 1zkd_A 50 DFTTSPEISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQT 129 (387)
T ss_dssp -CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHH
T ss_pred CeeCCCchHHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHH
Confidence 577776643 233332 22223347999999999998877642 2379999999999987777
Q ss_pred HhccCCceEEE
Q 015990 182 RFASIDQLKVL 192 (397)
Q Consensus 182 ~~~~~~~v~ii 192 (397)
++...+++.+.
T Consensus 130 ~L~~~~~v~W~ 140 (387)
T 1zkd_A 130 LLAGIRNIHWH 140 (387)
T ss_dssp HSTTCSSEEEE
T ss_pred HhcCCCCeEEe
Confidence 76544455554
No 312
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.91 E-value=0.089 Score=57.90 Aligned_cols=81 Identities=20% Similarity=0.113 Sum_probs=56.2
Q ss_pred CEEEEEcCcccHHHHHHHHcCC--cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchh---hhhhhHHh-hhcCCC
Q 015990 143 DIVLEIGPGTGSLTNVLLNAGA--TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIR---SHMLSLFE-RRKSSS 216 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~~~--~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~---~~~~~~~~-~~~~~~ 216 (397)
-+++|+.||.|.++..+.+.|. .|.|+|+|+.+++..+.|+ ++..++.+|+.++... ..+.+... .....+
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~---p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~ 617 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN---PGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKG 617 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC---TTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTT
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC---CCCccccccHHHHhhhccchhhhhhhhhhcccCC
Confidence 4899999999999999988886 4779999999999988886 4567788887544200 00000000 000124
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|+|++.+|
T Consensus 618 ~vDll~GGpP 627 (1002)
T 3swr_A 618 DVEMLCGGPP 627 (1002)
T ss_dssp TCSEEEECCC
T ss_pred CeeEEEEcCC
Confidence 6799999998
No 313
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.57 E-value=0.11 Score=51.04 Aligned_cols=21 Identities=19% Similarity=0.071 Sum_probs=18.4
Q ss_pred CCEEEEEcCcccHHHHHHHHc
Q 015990 142 GDIVLEIGPGTGSLTNVLLNA 162 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~ 162 (397)
.-+|+|+|||+|..|..+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 468999999999999988764
No 314
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=93.41 E-value=0.086 Score=52.29 Aligned_cols=43 Identities=19% Similarity=-0.038 Sum_probs=37.0
Q ss_pred CEEEEEcCcccHHHHHHHHcCC---c----EEEEeCCHHHHHHHHHHhcc
Q 015990 143 DIVLEIGPGTGSLTNVLLNAGA---T----VLAIEKDQHMVGLVRERFAS 185 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~~~---~----V~~vE~d~~~i~~a~~~~~~ 185 (397)
-+|+|+.||.|.++..+.+.|. - |.++|+|+.+++..+.++..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 3899999999999999988762 2 78899999999999988854
No 315
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.25 E-value=0.46 Score=37.08 Aligned_cols=85 Identities=15% Similarity=0.204 Sum_probs=58.2
Q ss_pred CCEEEEEcCcccHHHHHHH----HcC-CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 142 GDIVLEIGPGTGSLTNVLL----NAG-ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La----~~~-~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
+.+|+=+|+ |.++..++ +.| .+|+++|.+++-.+.+. ..++.++.+|..+... +.+. ..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~---~~~~------~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----RMGVATKQVDAKDEAG---LAKA------LG 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----TTTCEEEECCTTCHHH---HHHH------TT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----hCCCcEEEecCCCHHH---HHHH------Hc
Confidence 457898998 55555444 457 78999999998776655 1357778888765421 1111 13
Q ss_pred CcceEeecCCCcCcHHHHHHhccCCC
Q 015990 217 GFAKVVANIPFNISTDVIKQLLPMGD 242 (397)
Q Consensus 217 ~~d~Vv~NlPy~i~s~il~~L~~~g~ 242 (397)
..|.|+.+.|+....++.......+.
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~~~~g~ 94 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAKAAKAAGA 94 (118)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEECCCchhhHHHHHHHHHhCC
Confidence 57899999998887777777766553
No 316
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.84 E-value=0.4 Score=44.28 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=57.8
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
+++.+|=-|.+.|. ++..|++.|++|+.+|++++.++.+.+.+... +++..+.+|+.+...-+.+.+...+ ..+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~--~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE--TYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH--HcC
Confidence 46788888876653 34556667999999999999888777766544 4899999999887543322222211 236
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|++|.|-
T Consensus 84 ~iDiLVNNA 92 (254)
T 4fn4_A 84 RIDVLCNNA 92 (254)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789998774
No 317
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.79 E-value=0.83 Score=37.56 Aligned_cols=75 Identities=23% Similarity=0.275 Sum_probs=50.1
Q ss_pred CCEEEEEcCcc-cHH-HHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcc
Q 015990 142 GDIVLEIGPGT-GSL-TNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (397)
Q Consensus 142 ~~~VLEIG~G~-G~l-t~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d 219 (397)
.++|+=+|+|. |.. +..|.+.|.+|+++|.|++.++.+++. ++.++.||+.+...-. . ......|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-----g~~~i~gd~~~~~~l~-------~-a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-----GVRAVLGNAANEEIMQ-------L-AHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEESCTTSHHHHH-------H-TTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-----CCCEEECCCCCHHHHH-------h-cCcccCC
Confidence 35788888864 332 334444688999999999998887752 5778999987654211 0 0124578
Q ss_pred eEeecCCCcC
Q 015990 220 KVVANIPFNI 229 (397)
Q Consensus 220 ~Vv~NlPy~i 229 (397)
.|+.-.|-..
T Consensus 74 ~vi~~~~~~~ 83 (140)
T 3fwz_A 74 WLILTIPNGY 83 (140)
T ss_dssp EEEECCSCHH
T ss_pred EEEEECCChH
Confidence 8887777543
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.30 E-value=0.25 Score=43.00 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=35.9
Q ss_pred HhcCCCCCEEEEEcC--cccHHHHHHHH-cCCcEEEEeCCHHHHHHHHH
Q 015990 136 AAAVQEGDIVLEIGP--GTGSLTNVLLN-AGATVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 136 ~~~~~~~~~VLEIG~--G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~ 181 (397)
.+.++++++||..|+ |.|..+..++. .|++|++++.+++..+.+++
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 456788999999994 56766666665 48899999999988777654
No 319
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.29 E-value=0.22 Score=53.47 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=43.8
Q ss_pred CCEEEEEcCcccHHHHHHHHcC-------CcEEEEeCCHHHHHHHHHHhccCCceEEEEcccccc
Q 015990 142 GDIVLEIGPGTGSLTNVLLNAG-------ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKC 199 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~~-------~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~ 199 (397)
.-+|||+.||.|.++.-+.+.| .-+.++|+|+.+++..+.|+ ++..++++|+.++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh---p~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH---PQTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC---TTSEEEESCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC---CCCceecCcHHHh
Confidence 3479999999999998887765 25779999999999999886 4556677776543
No 320
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.08 E-value=0.56 Score=42.37 Aligned_cols=84 Identities=17% Similarity=0.193 Sum_probs=55.4
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+.. .+++.++.+|+.+......+.+...+ ..+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA--EFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH--HcC
Confidence 4678888896544 23455556799999999999888776666543 34789999999876532222221111 124
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 86 ~id~li~~Ag 95 (253)
T 3qiv_A 86 GIDYLVNNAA 95 (253)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888888753
No 321
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=91.88 E-value=0.74 Score=41.36 Aligned_cols=84 Identities=14% Similarity=0.175 Sum_probs=54.9
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+... .++.++.+|+.+...-..+.+...+ ..+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA--ENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH--HcC
Confidence 3567888886543 234555567999999999998877766665443 4899999999876432222222211 235
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 82 ~id~li~~Ag 91 (247)
T 3lyl_A 82 AIDILVNNAG 91 (247)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888887753
No 322
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.72 E-value=0.61 Score=38.12 Aligned_cols=72 Identities=21% Similarity=0.269 Sum_probs=47.7
Q ss_pred CCEEEEEcCcc-cH-HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcc
Q 015990 142 GDIVLEIGPGT-GS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (397)
Q Consensus 142 ~~~VLEIG~G~-G~-lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d 219 (397)
..+|+=+|+|. |. ++..|.+.|.+|+++|.|++.++.+++. .+.++.+|..+...-. . ......|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~-------~-~~~~~~d 72 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYR-------S-LDLEGVS 72 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHH-------H-SCCTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHH-------h-CCcccCC
Confidence 35788889854 22 2334444588999999999988877652 4678899987653211 0 0124578
Q ss_pred eEeecCC
Q 015990 220 KVVANIP 226 (397)
Q Consensus 220 ~Vv~NlP 226 (397)
.|+...|
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 8888777
No 323
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=91.72 E-value=0.63 Score=42.38 Aligned_cols=83 Identities=13% Similarity=0.230 Sum_probs=55.2
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+...-+.+.+...+ ..+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE--KFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH--HcC
Confidence 4567888886543 234455667999999999999888877776554 3899999999876432222221111 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 83 ~id~lv~nA 91 (257)
T 3imf_A 83 RIDILINNA 91 (257)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 688888774
No 324
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.66 E-value=0.89 Score=41.52 Aligned_cols=83 Identities=13% Similarity=0.156 Sum_probs=56.1
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... .++.++.+|+.+...-+.+.+...+ ..+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK--AYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--HTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--HcC
Confidence 56789988976542 34566667999999999998877766665443 4899999999876532222221111 235
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 788888775
No 325
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=91.65 E-value=0.7 Score=43.75 Aligned_cols=79 Identities=15% Similarity=0.184 Sum_probs=51.2
Q ss_pred HHHHHHHHHhc-----CCCCCEEEEEcC------cccHHHHH-HHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEcc
Q 015990 128 EINDQLAAAAA-----VQEGDIVLEIGP------GTGSLTNV-LLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQED 195 (397)
Q Consensus 128 ~i~~~i~~~~~-----~~~~~~VLEIG~------G~G~lt~~-La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD 195 (397)
.-+..+.+.++ +..+.+|||+|+ .+|..... +...|+.|+++|+.+-. ...+ .+++||
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~---------sda~-~~IqGD 160 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFV---------SDAD-STLIGD 160 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCB---------CSSS-EEEESC
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccc---------cCCC-eEEEcc
Confidence 33556777764 346899999996 66773221 21224689999987521 1123 459999
Q ss_pred ccccchhhhhhhHHhhhcCCCCcceEeecCCCcC
Q 015990 196 FVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNI 229 (397)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~d~Vv~NlPy~i 229 (397)
..+.. ...++|+|++++.-+.
T Consensus 161 ~~~~~-------------~~~k~DLVISDMAPNt 181 (344)
T 3r24_A 161 CATVH-------------TANKWDLIISDMYDPR 181 (344)
T ss_dssp GGGEE-------------ESSCEEEEEECCCCTT
T ss_pred ccccc-------------cCCCCCEEEecCCCCc
Confidence 76653 2367999999986544
No 326
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.62 E-value=0.67 Score=43.27 Aligned_cols=85 Identities=13% Similarity=0.094 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCc----ccH-HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcC
Q 015990 140 QEGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 140 ~~~~~VLEIG~G----~G~-lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
-.+++||=.|.+ .|. ++..|++.|++|+.++.+++..+.+++.....+++.++.+|+.+......+.+...+ .
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK--K 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH--h
Confidence 357789999965 343 456777789999999999876665555544445788999999876532222222211 2
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 107 ~g~iD~lVnnAG 118 (293)
T 3grk_A 107 WGKLDFLVHAIG 118 (293)
T ss_dssp TSCCSEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 357899988754
No 327
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=91.56 E-value=0.3 Score=55.32 Aligned_cols=82 Identities=20% Similarity=0.147 Sum_probs=55.9
Q ss_pred CCEEEEEcCcccHHHHHHHHcCC--cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhh---hhhhHH-hhhcCC
Q 015990 142 GDIVLEIGPGTGSLTNVLLNAGA--TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRS---HMLSLF-ERRKSS 215 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~~~--~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~---~~~~~~-~~~~~~ 215 (397)
.-+++|+.||.|.++..+.+.|. .|.++|+|+.+++..+.|+ ++..++.+|+.++.... ...+.. ......
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~---p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~ 927 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN---PGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQK 927 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC---TTSEEECSCHHHHHHHHTTTCSBCSSCCBCCCT
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC---CCCcEeeccHHHHhHhhhccchhhhhhhhcccc
Confidence 45799999999999999988885 4789999999999988886 45567777765432100 000000 000012
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|+|++.+|
T Consensus 928 ~~vDvl~GGpP 938 (1330)
T 3av4_A 928 GDVEMLCGGPP 938 (1330)
T ss_dssp TTCSEEEECCC
T ss_pred CccceEEecCC
Confidence 35799999998
No 328
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.34 E-value=0.73 Score=43.16 Aligned_cols=84 Identities=14% Similarity=0.105 Sum_probs=56.1
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|.+|+.++.+++..+.+.+.+... .++.++.+|+.+....+.+.+...+ ..+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR--LLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH--hCC
Confidence 5678999997654 234555667999999999998887776666443 4899999999876532222221111 124
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 108 ~id~lvnnAg 117 (301)
T 3tjr_A 108 GVDVVFSNAG 117 (301)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888888743
No 329
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.27 E-value=0.51 Score=42.99 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=55.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+...-..+.+...+ . +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~-g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA--H-A 82 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH--H-S
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh--h-C
Confidence 46788888876552 34555667999999999988777666655433 4899999999876532222222221 2 5
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 83 ~id~lv~nAg 92 (252)
T 3h7a_A 83 PLEVTIFNVG 92 (252)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEECCC
Confidence 7888887743
No 330
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.91 E-value=0.71 Score=42.12 Aligned_cols=84 Identities=13% Similarity=0.142 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcC
Q 015990 140 QEGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
-.+++||=.|++ |.++ ..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+..-...+.+...+ .
T Consensus 27 l~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA--A 103 (262)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH--h
Confidence 356789888865 4444 445556899999999998877766665433 4889999999876532222221111 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 104 ~g~id~lv~~Ag 115 (262)
T 3rkr_A 104 HGRCDVLVNNAG 115 (262)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 246888887754
No 331
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.90 E-value=0.85 Score=42.15 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=54.8
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEcccccc-chhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKC-HIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~-~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|++.| .++..|++.|++|++++.++.-.+.+.+.+... .++.++.+|+.+. .....+.+.+.+ .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~--~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT--H 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH--H
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH--h
Confidence 4678888887644 234455567999999999998776666655433 3799999999886 432222222221 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|++|.|--
T Consensus 89 ~g~iD~lv~nAg 100 (311)
T 3o26_A 89 FGKLDILVNNAG 100 (311)
T ss_dssp HSSCCEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 247899998854
No 332
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.87 E-value=0.92 Score=41.90 Aligned_cols=83 Identities=12% Similarity=0.140 Sum_probs=54.3
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhh-HHhhhcCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLS-LFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~-~~~~~~~~ 215 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+... .++.++.+|+.+......+.+ ..+ ..
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~---~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVE---RF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH---HH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH---Hc
Confidence 4678998896544 234555667999999999998877766666543 489999999987643222222 222 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 100 g~id~lv~nAg 110 (279)
T 3sju_A 100 GPIGILVNSAG 110 (279)
T ss_dssp CSCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 46888887743
No 333
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.78 E-value=0.97 Score=41.14 Aligned_cols=84 Identities=20% Similarity=0.320 Sum_probs=56.3
Q ss_pred CCCEEEEEcC-cc--cH-HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGP-GT--GS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~-G~--G~-lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|+ |. |. ++..|++.|++|+.++.+++-.+.+.+.+... +++.++.+|+.+...-+.+.+...+ .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE--K 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH--H
Confidence 4678888886 44 43 45667778999999999998877776666433 3899999999876432222221111 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 99 ~g~id~li~~Ag 110 (266)
T 3o38_A 99 AGRLDVLVNNAG 110 (266)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCcEEEECCC
Confidence 246888888754
No 334
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=90.77 E-value=0.52 Score=39.91 Aligned_cols=58 Identities=19% Similarity=0.076 Sum_probs=47.9
Q ss_pred CCchHHHHHhhhc--CHHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH--hhcccCCC
Q 015990 334 KRKMLRKSLQHLC--TSLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLI--SYGSRQWF 396 (397)
Q Consensus 334 rRK~l~n~L~~~~--~~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~--~~~~~~~~ 396 (397)
..|.+.-+|..++ .......+++.+||+++.|+. +||.+|..+|.+.... .|+--.||
T Consensus 17 ~~k~v~~aLt~I~GIG~~~A~~I~~~~gid~~~r~g-----~Lt~~ei~~i~~~i~~~~~~~iP~w~ 78 (148)
T 3j20_O 17 GNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAG-----YLTDEQVKKIEEILADPVAHGIPRWA 78 (148)
T ss_dssp CSSCHHHHHHHSTTCCHHHHHHHHHHHTCCSSSCTT-----BCCHHHHHHHHHHHHCHHHHCCCTTT
T ss_pred CCCEehhhhhhccCcCHHHHHHHHHHhCCCCCceec-----cCCHHHHHHHHHHHhcccccCCChhh
Confidence 3566777887765 566677899999999999999 9999999999998754 37777887
No 335
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.75 E-value=1.2 Score=42.67 Aligned_cols=102 Identities=25% Similarity=0.298 Sum_probs=62.5
Q ss_pred HHHHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhH
Q 015990 132 QLAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~ 208 (397)
..++.+.++++++||=+|+|. |.++..+++. |+ +|+++|.+++..+.+++.-. -.++.. .+.++.+.+.+
T Consensus 157 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa----~~vi~~--~~~~~~~~v~~- 229 (352)
T 3fpc_A 157 HGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA----TDIINY--KNGDIVEQILK- 229 (352)
T ss_dssp HHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC----CEEECG--GGSCHHHHHHH-
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC----ceEEcC--CCcCHHHHHHH-
Confidence 345677889999999999875 7777788875 76 89999999998888877421 122322 12222111111
Q ss_pred HhhhcCCCCcceEeecCCC-cCcHHHHHHhccCCCc
Q 015990 209 FERRKSSSGFAKVVANIPF-NISTDVIKQLLPMGDI 243 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~NlPy-~i~s~il~~L~~~g~~ 243 (397)
...+..+|+|+-...- ......+..+.++|.+
T Consensus 230 ---~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~ 262 (352)
T 3fpc_A 230 ---ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDI 262 (352)
T ss_dssp ---HTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred ---HcCCCCCCEEEECCCChHHHHHHHHHHhcCCEE
Confidence 1123358888866554 2334455555565543
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=90.55 E-value=1.6 Score=41.81 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=61.3
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CCc-EEEEeCCHHHHHHHHHHhccCCceEEEEcc-ccccchhhhhhhHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GAT-VLAIEKDQHMVGLVRERFASIDQLKVLQED-FVKCHIRSHMLSLF 209 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~~-V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD-~~~~~~~~~~~~~~ 209 (397)
++.+.++++++||=+|+|. |.++..+++. |++ |++++.+++-.+.+++. .. .+.....| ...-++. +.+
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~--~~~~~~~~~~~~~~~~----~~v 244 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP--EVVTHKVERLSAEESA----KKI 244 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT--TCEEEECCSCCHHHHH----HHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch--hcccccccccchHHHH----HHH
Confidence 4667888999999999865 7777777775 775 99999999999999876 32 22222222 1111111 111
Q ss_pred hhhcCCCCcceEeecCCCc-CcHHHHHHhccCCCc
Q 015990 210 ERRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDI 243 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlPy~-i~s~il~~L~~~g~~ 243 (397)
.+...+..+|+|+-...-. .....+..+.++|.+
T Consensus 245 ~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~i 279 (363)
T 3m6i_A 245 VESFGGIEPAVALECTGVESSIAAAIWAVKFGGKV 279 (363)
T ss_dssp HHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEE
T ss_pred HHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEE
Confidence 1111234688888665432 223445555566544
No 337
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=90.46 E-value=1 Score=41.63 Aligned_cols=83 Identities=19% Similarity=0.244 Sum_probs=53.1
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++. .++ ..|++.|++|++++.+++..+.+.+.+...+++.++.+|+.+...-+.+.+...+ ..+
T Consensus 28 ~~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g 104 (276)
T 2b4q_A 28 AGRIALVTGGSR-GIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGE--LSA 104 (276)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHH--HCS
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHH--hcC
Confidence 467888888654 444 4455568999999999887766665554434788889998875432212111111 224
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 105 ~iD~lvnnAg 114 (276)
T 2b4q_A 105 RLDILVNNAG 114 (276)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888888753
No 338
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.42 E-value=0.48 Score=44.31 Aligned_cols=84 Identities=15% Similarity=0.127 Sum_probs=54.4
Q ss_pred CCCEEEEEcC----cccH-HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGP----GTGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~----G~G~-lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|. |.|. ++..|++.|++|+.++.+++..+.+++.....+++.++.+|+.+...-+.+.+...+ ..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE--EW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 4678998987 4443 466777789999999999766555554444335678899999876432222221111 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 107 g~iD~lVnnAG 117 (296)
T 3k31_A 107 GSLDFVVHAVA 117 (296)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 56899988754
No 339
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=90.22 E-value=1 Score=41.52 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=53.4
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.| .++..|++.|++|+.++.++...+.+++.....+++.++.+|+.+......+.+.... .+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~---~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA---TRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH---HSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh---cCC
Confidence 4678998997654 2355566679999999977665555554433345899999999876533222222221 256
Q ss_pred cceEeecC
Q 015990 218 FAKVVANI 225 (397)
Q Consensus 218 ~d~Vv~Nl 225 (397)
.|.+|.|-
T Consensus 107 iD~lv~nA 114 (273)
T 3uf0_A 107 VDVLVNNA 114 (273)
T ss_dssp CCEEEECC
T ss_pred CcEEEECC
Confidence 88888874
No 340
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.17 E-value=0.94 Score=41.21 Aligned_cols=83 Identities=13% Similarity=0.168 Sum_probs=54.3
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+....+.+.+...+ ..+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD--QFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH--HcC
Confidence 46788888865442 24455567999999999998777766655433 4899999999876532222221111 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 89 ~id~lv~nA 97 (256)
T 3gaf_A 89 KITVLVNNA 97 (256)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 688888774
No 341
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=90.15 E-value=1.3 Score=40.93 Aligned_cols=84 Identities=21% Similarity=0.184 Sum_probs=55.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+....+.+.+...+ ..+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL--KFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH--HhC
Confidence 46788888865442 24455567999999999998887777666543 4889999999876432222221111 125
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 105 ~iD~lVnnAg 114 (283)
T 3v8b_A 105 HLDIVVANAG 114 (283)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888887743
No 342
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.11 E-value=0.55 Score=45.92 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=40.9
Q ss_pred HHHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHH
Q 015990 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~ 181 (397)
.+..++++++++||-+|+|. |.++..+++. |+ +|+++|.+++..+.+++
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 34567888999999999976 8888888874 77 89999999998888864
No 343
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.08 E-value=1.2 Score=42.88 Aligned_cols=99 Identities=15% Similarity=0.141 Sum_probs=61.0
Q ss_pred HHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh
Q 015990 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
+.+.++++++||=+|+|. |.++..+++. |++|++++.+++-.+.+++. .. -.++..+.. ++.+.+.+.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga---~~vi~~~~~--~~~~~v~~~---- 252 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL-GA---DHGINRLEE--DWVERVYAL---- 252 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TC---SEEEETTTS--CHHHHHHHH----
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc-CC---CEEEcCCcc--cHHHHHHHH----
Confidence 456788999999999875 7777777774 88999999999988888764 21 123322211 111111111
Q ss_pred cCCCCcceEeecCCCcCcHHHHHHhccCCCc
Q 015990 213 KSSSGFAKVVANIPFNISTDVIKQLLPMGDI 243 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~ 243 (397)
.....+|+|+-+..-......+..+.++|.+
T Consensus 253 ~~g~g~D~vid~~g~~~~~~~~~~l~~~G~i 283 (363)
T 3uog_A 253 TGDRGADHILEIAGGAGLGQSLKAVAPDGRI 283 (363)
T ss_dssp HTTCCEEEEEEETTSSCHHHHHHHEEEEEEE
T ss_pred hCCCCceEEEECCChHHHHHHHHHhhcCCEE
Confidence 1234688888776633344555566665543
No 344
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.01 E-value=0.5 Score=45.07 Aligned_cols=51 Identities=16% Similarity=0.204 Sum_probs=41.5
Q ss_pred HHHHHhcCCCCCEEEEEcCc--ccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHH
Q 015990 132 QLAAAAAVQEGDIVLEIGPG--TGSLTNVLLNA-GATVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 132 ~i~~~~~~~~~~~VLEIG~G--~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~ 182 (397)
.+.+.+.++++++||-+|+| .|.++..+++. |++|++++.+++-.+.+++.
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC
Confidence 34455678899999999986 68888777774 88999999999888888764
No 345
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=89.99 E-value=1.3 Score=40.83 Aligned_cols=83 Identities=14% Similarity=0.231 Sum_probs=53.8
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCC----ceEEEEccccccchhhhhhhHHhhhc
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASID----QLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~----~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
.+++||=.|.+.| .++..|++.|++|+.++.+++..+.+.+.+...+ ++.++.+|+.+...-..+.+...+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-- 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA-- 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH--
Confidence 4678888886544 2345556679999999999988777666654332 789999999876432222221111
Q ss_pred CCCCcceEeecC
Q 015990 214 SSSGFAKVVANI 225 (397)
Q Consensus 214 ~~~~~d~Vv~Nl 225 (397)
..+..|.+|.|-
T Consensus 88 ~~g~id~lv~nA 99 (281)
T 3svt_A 88 WHGRLHGVVHCA 99 (281)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 124678888774
No 346
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.86 E-value=0.69 Score=44.23 Aligned_cols=91 Identities=23% Similarity=0.247 Sum_probs=58.9
Q ss_pred HHHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHh
Q 015990 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
.+..+.++++++||=+|+|. |.++..+++. |++|++++.+++-.+.+++. +--.++ .|...+
T Consensus 168 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~v~-~~~~~~----------- 231 (348)
T 3two_A 168 PLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM----GVKHFY-TDPKQC----------- 231 (348)
T ss_dssp HHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT----TCSEEE-SSGGGC-----------
T ss_pred HHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc----CCCeec-CCHHHH-----------
Confidence 34556888999999999875 7777777774 88999999999888888763 211222 332211
Q ss_pred hhcCCCCcceEeecCCCc-CcHHHHHHhccCCCc
Q 015990 211 RRKSSSGFAKVVANIPFN-ISTDVIKQLLPMGDI 243 (397)
Q Consensus 211 ~~~~~~~~d~Vv~NlPy~-i~s~il~~L~~~g~~ 243 (397)
...+|+|+-...-. .....+..+.++|.+
T Consensus 232 ----~~~~D~vid~~g~~~~~~~~~~~l~~~G~i 261 (348)
T 3two_A 232 ----KEELDFIISTIPTHYDLKDYLKLLTYNGDL 261 (348)
T ss_dssp ----CSCEEEEEECCCSCCCHHHHHTTEEEEEEE
T ss_pred ----hcCCCEEEECCCcHHHHHHHHHHHhcCCEE
Confidence 12678888665544 334455555555543
No 347
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=89.61 E-value=1.4 Score=39.75 Aligned_cols=82 Identities=16% Similarity=0.247 Sum_probs=52.1
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.++++|=.|++. .++ ..|++.|++|+.++.+++..+.+.+.+... .++.++.+|+.+...-+.+.+...+ ..
T Consensus 6 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--~~ 82 (247)
T 2jah_A 6 QGKVALITGASS-GIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE--AL 82 (247)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 356888888654 444 445556999999999988776665555332 4788999999876432212111111 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 83 g~id~lv~nA 92 (247)
T 2jah_A 83 GGLDILVNNA 92 (247)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 4678888774
No 348
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=89.57 E-value=1.9 Score=39.08 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=53.7
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh-HHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS-LFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+. +++.++.+|+.+...-..+.+ ..+ ..+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~---~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--PAAYAVQMDVTRQDSIDAAIAATVE---HAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHH---HSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CCceEEEeeCCCHHHHHHHHHHHHH---HcC
Confidence 4678888886543 2344556679999999999987776666553 478899999987643222222 222 235
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 82 ~id~lv~~Ag 91 (259)
T 4e6p_A 82 GLDILVNNAA 91 (259)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7889888743
No 349
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=89.44 E-value=0.77 Score=42.61 Aligned_cols=83 Identities=18% Similarity=0.302 Sum_probs=55.1
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+......+.+...+ ..+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR--RFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH--HcC
Confidence 4678888887544 234555667999999999998887777666543 4889999999876432222221111 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 85 ~iD~lvnnA 93 (280)
T 3tox_A 85 GLDTAFNNA 93 (280)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 688888774
No 350
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=89.39 E-value=1.4 Score=40.09 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=51.7
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc---CCceEEEEccccccchhhhhhh-HHhhhc
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSHMLS-LFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~---~~~v~ii~gD~~~~~~~~~~~~-~~~~~~ 213 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+.. ..++.++.+|+.+...-..+.+ ..+
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--- 88 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE--- 88 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH---
Confidence 4578888886544 23445556699999999998776655544432 2478899999987643221211 111
Q ss_pred CCCCcceEeecC
Q 015990 214 SSSGFAKVVANI 225 (397)
Q Consensus 214 ~~~~~d~Vv~Nl 225 (397)
..+..|.+|.|-
T Consensus 89 ~~g~id~lv~nA 100 (267)
T 1iy8_A 89 RFGRIDGFFNNA 100 (267)
T ss_dssp HHSCCSEEEECC
T ss_pred HcCCCCEEEECC
Confidence 124678888774
No 351
>2xzm_M RPS18E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_M
Probab=89.39 E-value=0.77 Score=39.13 Aligned_cols=58 Identities=10% Similarity=0.062 Sum_probs=47.5
Q ss_pred CCchHHHHHhhhc--CHHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH--hhcccCCC
Q 015990 334 KRKMLRKSLQHLC--TSLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLI--SYGSRQWF 396 (397)
Q Consensus 334 rRK~l~n~L~~~~--~~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~--~~~~~~~~ 396 (397)
..|.+.-+|..++ .......+++.+||+++.|+. +||.+|..+|.+.... .|+--.||
T Consensus 24 ~~k~v~~aLt~I~GIG~~~A~~I~~~~gid~~~r~~-----~Lt~~ei~~l~~~i~~p~~~~iP~w~ 85 (155)
T 2xzm_M 24 GKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAG-----LLTEDQCNKITDLIADPEAHGIPTWL 85 (155)
T ss_dssp CSSCHHHHHTTSTTCCHHHHHHHHHHTTCCSSSCSS-----CSCHHHHHHHHHHHHSHHHHCCCGGG
T ss_pred CCCEEEEeeecccccCHHHHHHHHHHcCCCcccccc-----cCCHHHHHHHHHHHhCccccCCCHHH
Confidence 4566777887765 566677899999999999999 9999999999988754 67767776
No 352
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=89.39 E-value=1.7 Score=39.49 Aligned_cols=82 Identities=13% Similarity=0.184 Sum_probs=51.9
Q ss_pred CCCEEEEEcCcccHHHHH----HHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++ |.++.. |++.|++|++++.+++..+.+.+.+...+++.++.+|+.+...-..+.+...+ ..+
T Consensus 15 ~~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~ 91 (278)
T 2bgk_A 15 QDKVAIITGGA-GGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA--KHG 91 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred cCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHH--HcC
Confidence 45788888864 555544 44568999999999877666555554334799999999876422211111111 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|.
T Consensus 92 ~id~li~~A 100 (278)
T 2bgk_A 92 KLDIMFGNV 100 (278)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 678888764
No 353
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.38 E-value=1.3 Score=40.47 Aligned_cols=83 Identities=18% Similarity=0.212 Sum_probs=54.1
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|.+.| .++..|++.|++|+.++.+++-.+.+.+.+... +++.++.+|+.+...-+.+.+...+ ..
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE--EF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH--Hh
Confidence 4678888886543 234455567999999999998877766665543 3789999999876432222221111 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 87 g~id~lvnnA 96 (262)
T 3pk0_A 87 GGIDVVCANA 96 (262)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 4688888774
No 354
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=89.34 E-value=1.6 Score=40.26 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=53.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCC----------------HHHHHHHHHHhccC-CceEEEEccccccc
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD----------------QHMVGLVRERFASI-DQLKVLQEDFVKCH 200 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d----------------~~~i~~a~~~~~~~-~~v~ii~gD~~~~~ 200 (397)
.+++||=.|++.|. ++..|++.|++|+.+|.+ ++.++.+.+.+... +++.++.+|+.+..
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 46789988976542 345566679999999987 55555555544433 48999999998765
Q ss_pred hhhhhhhHHhhhcCCCCcceEeecC
Q 015990 201 IRSHMLSLFERRKSSSGFAKVVANI 225 (397)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~d~Vv~Nl 225 (397)
..+.+.+...+ ..+..|.+|.|-
T Consensus 90 ~v~~~~~~~~~--~~g~id~lv~nA 112 (286)
T 3uve_A 90 ALKAAVDSGVE--QLGRLDIIVANA 112 (286)
T ss_dssp HHHHHHHHHHH--HHSCCCEEEECC
T ss_pred HHHHHHHHHHH--HhCCCCEEEECC
Confidence 32222221111 124688888874
No 355
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=89.27 E-value=1.1 Score=41.11 Aligned_cols=82 Identities=16% Similarity=0.137 Sum_probs=53.4
Q ss_pred CCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 142 ~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+......+.+...+ ..+.
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g~ 81 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVD--TWGR 81 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH--HHSC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--HcCC
Confidence 5678888865442 34455567999999999998877766665443 4788999999876432222221111 1246
Q ss_pred cceEeecC
Q 015990 218 FAKVVANI 225 (397)
Q Consensus 218 ~d~Vv~Nl 225 (397)
.|.+|.|-
T Consensus 82 iD~lVnnA 89 (264)
T 3tfo_A 82 IDVLVNNA 89 (264)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 88888774
No 356
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.22 E-value=1.8 Score=39.62 Aligned_cols=82 Identities=12% Similarity=0.151 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccHHHHHH----HHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~L----a~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
.+++||=.|++ |.++..+ ++.|.+|++++.+++..+.+.+.+... .++.++.+|+.+...-..+.+ +.+ .
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~---~ 105 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA---E 105 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH---H
Confidence 46788888854 5555544 456899999999988776665555432 478999999987542221111 111 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.||.|--
T Consensus 106 ~g~iD~li~~Ag 117 (272)
T 1yb1_A 106 IGDVSILVNNAG 117 (272)
T ss_dssp TCCCSEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 246888887753
No 357
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.16 E-value=0.99 Score=41.24 Aligned_cols=84 Identities=13% Similarity=0.129 Sum_probs=58.0
Q ss_pred CCCEEEEEcC----cccH-HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhh-HHhhh
Q 015990 141 EGDIVLEIGP----GTGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLS-LFERR 212 (397)
Q Consensus 141 ~~~~VLEIG~----G~G~-lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~-~~~~~ 212 (397)
+++++|=-|+ |.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+......+.+ ..+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-- 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK-- 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH--
Confidence 5778888885 4554 46677788999999999988877777666543 378899999987643222222 222
Q ss_pred cCCCCcceEeecCCC
Q 015990 213 KSSSGFAKVVANIPF 227 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy 227 (397)
..+..|.+|.|..+
T Consensus 83 -~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 83 -DVGNIDGVYHSIAF 96 (256)
T ss_dssp -HHCCCSEEEECCCC
T ss_pred -HhCCCCEEEecccc
Confidence 23678999988653
No 358
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.14 E-value=0.84 Score=42.20 Aligned_cols=83 Identities=20% Similarity=0.263 Sum_probs=54.3
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+...-+.+.+...+ ..+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~--~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG--ELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH--HcC
Confidence 46788888876442 34555667999999999988777666655433 4789999999876532222221111 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 109 ~iD~lvnnA 117 (276)
T 3r1i_A 109 GIDIAVCNA 117 (276)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 688988774
No 359
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=89.07 E-value=1.8 Score=39.72 Aligned_cols=81 Identities=11% Similarity=0.101 Sum_probs=51.9
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
.+++||=.|++ |.++ ..|++.|++|++++.+++..+.+.+.+.. ..++.++.+|+.+...-+.+.+ ..+ .
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~---~ 96 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE---R 96 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH---H
Confidence 45788888865 4444 44555689999999998776655554433 2478899999887643221111 112 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 97 ~g~iD~lv~~A 107 (277)
T 2rhc_B 97 YGPVDVLVNNA 107 (277)
T ss_dssp TCSCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 24688888774
No 360
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.04 E-value=0.23 Score=47.31 Aligned_cols=49 Identities=18% Similarity=0.338 Sum_probs=40.1
Q ss_pred HHhcCCCCCEEEEEcC--cccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHh
Q 015990 135 AAAAVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERF 183 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG~--G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~ 183 (397)
+...++++++||-+|+ |.|..+..+++. |++|++++.+++-.+.+.+.+
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 194 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL 194 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence 6678899999999998 568887777764 889999999998888874444
No 361
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=89.03 E-value=1.6 Score=39.12 Aligned_cols=83 Identities=14% Similarity=0.214 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccHHHHH----HHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++ |.++.. |++.|++|++++.+++..+.+.+.+...++++++.+|+.+...-..+.+.... ..+
T Consensus 5 ~~k~vlVtGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~ 81 (251)
T 1zk4_A 5 DGKVAIITGGT-LGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEK--AFG 81 (251)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCcEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHH--HhC
Confidence 35678877854 455544 44568999999999887766655554335799999999875422111111111 124
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.||.|.-
T Consensus 82 ~id~li~~Ag 91 (251)
T 1zk4_A 82 PVSTLVNNAG 91 (251)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6788887753
No 362
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=88.84 E-value=1.9 Score=38.99 Aligned_cols=82 Identities=20% Similarity=0.254 Sum_probs=54.9
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+. .++.++.+|+.+...-..+.+...+ ..+.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~ 83 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG--DAALAVAADISKEADVDAAVEAALS--KFGK 83 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHH--hcCC
Confidence 4578898897654 2455666679999999999988877766553 4789999999876432222221111 1246
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
.|.+|.|--
T Consensus 84 id~li~~Ag 92 (261)
T 3n74_A 84 VDILVNNAG 92 (261)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 788887743
No 363
>3r8n_M 30S ribosomal protein S13; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_M* 3j18_M 3oaq_M 3ofa_M 3ofx_M 3ofo_M 3r8o_M 4a2i_M 4gd1_M 4gd2_M 3i1m_M 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M ...
Probab=88.83 E-value=0.88 Score=36.76 Aligned_cols=48 Identities=10% Similarity=0.133 Sum_probs=41.2
Q ss_pred CCchHHHHHhhhc--CHHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Q 015990 334 KRKMLRKSLQHLC--TSLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHN 386 (397)
Q Consensus 334 rRK~l~n~L~~~~--~~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~ 386 (397)
..|.+.-+|..++ .......+++.+||+++.|+. +||.+|...|.+..
T Consensus 10 ~~k~v~~aLt~I~GIG~~~A~~I~~~~gid~~~r~~-----~Lt~~ei~~l~~~i 59 (114)
T 3r8n_M 10 DHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKIS-----ELSEGQIDTLRDEV 59 (114)
T ss_dssp CSSCHHHHGGGSTTCCHHHHHHHHHHTTCCTTCCST-----TCCHHHHHHHHHHH
T ss_pred CCCEeHhhHhhhcCcCHHHHHHHHHHcCcCcccCcc-----cCCHHHHHHHHHHH
Confidence 4577888888765 566778899999999999999 99999999999876
No 364
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=88.81 E-value=0.88 Score=41.94 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=54.8
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+......+.+...+ ..+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE--QGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH--HTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH--HCC
Confidence 46788888865432 34455567999999999998877766655433 4789999999876532222222211 235
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 103 ~iD~lv~nAg 112 (271)
T 4ibo_A 103 DVDILVNNAG 112 (271)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6889888743
No 365
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=88.80 E-value=1.4 Score=40.68 Aligned_cols=82 Identities=20% Similarity=0.250 Sum_probs=54.3
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+ ..++.++.+|+.+......+.+...+ ..+.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g~ 103 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVA--AFGG 103 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHH--HHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHH--HcCC
Confidence 4678888887654 234556667999999999998877766665 24788999999876432222221111 1246
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
.|.+|.|--
T Consensus 104 iD~lvnnAg 112 (277)
T 3gvc_A 104 VDKLVANAG 112 (277)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 888887743
No 366
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=88.78 E-value=1.1 Score=40.69 Aligned_cols=84 Identities=14% Similarity=0.227 Sum_probs=54.0
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc---C-CceEEEEccccccchhhhhhhHHhhhc
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFAS---I-DQLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~---~-~~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
.++++|=.|++.| .++..|++.|++|+.++.+++..+.+.+.+.. . .++.++.+|+.+....+.+.+...+
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-- 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ-- 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH--
Confidence 4568888887654 23455566799999999999877766655432 2 4788999999876432222221111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|--
T Consensus 84 ~~g~iD~lvnnAg 96 (250)
T 3nyw_A 84 KYGAVDILVNAAA 96 (250)
T ss_dssp HHCCEEEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1246888887753
No 367
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=88.75 E-value=1.7 Score=39.61 Aligned_cols=84 Identities=18% Similarity=0.195 Sum_probs=54.6
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc-C--CceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFAS-I--DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+.. . .++.++.+|+.+......+.+...+ .
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER--T 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH--H
Confidence 4678888887654 23455566799999999999877766665543 2 2589999999876532222221111 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 85 ~g~id~lvnnAg 96 (265)
T 3lf2_A 85 LGCASILVNNAG 96 (265)
T ss_dssp HCSCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 246888888753
No 368
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=88.75 E-value=1.3 Score=40.62 Aligned_cols=83 Identities=18% Similarity=0.149 Sum_probs=51.8
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCC------------HHHHHHHHHHhcc-CCceEEEEccccccchhhh
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKD------------QHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d------------~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~ 204 (397)
.+++||=.|++.| .++..|++.|++|+.++.+ ++..+.+.+.+.. .+++.++.+|+.+...-+.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 4678998886544 2345566679999999987 5555544443332 3489999999987653222
Q ss_pred hhhHHhhhcCCCCcceEeecC
Q 015990 205 MLSLFERRKSSSGFAKVVANI 225 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~Nl 225 (397)
+.+...+ ..+..|.+|.|-
T Consensus 92 ~~~~~~~--~~g~id~lv~nA 110 (278)
T 3sx2_A 92 ALQAGLD--ELGRLDIVVANA 110 (278)
T ss_dssp HHHHHHH--HHCCCCEEEECC
T ss_pred HHHHHHH--HcCCCCEEEECC
Confidence 2221111 124688998874
No 369
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.74 E-value=2 Score=38.94 Aligned_cols=84 Identities=17% Similarity=0.168 Sum_probs=51.8
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++ |.++ ..|++.|++|++++.+++..+.+.+.+.. ..++.++.+|+.+......+.+...+ ...
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN-HFH 85 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH-HTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence 45788888864 4444 44555699999999998876665554433 24788999998875422211111111 011
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 86 g~id~lv~~Ag 96 (260)
T 2ae2_A 86 GKLNILVNNAG 96 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46888887743
No 370
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.71 E-value=0.7 Score=44.59 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=40.1
Q ss_pred HHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHH
Q 015990 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~ 182 (397)
+.+.++++++||-+|+|. |.++..+++. |+ +|+++|.+++..+.+++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 556788999999999886 7778888774 77 699999999999988764
No 371
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.70 E-value=1.5 Score=40.34 Aligned_cols=82 Identities=13% Similarity=0.187 Sum_probs=51.8
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-C---ceEEEEccccccchhhhhhh-HHhhh
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI-D---QLKVLQEDFVKCHIRSHMLS-LFERR 212 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~---~v~ii~gD~~~~~~~~~~~~-~~~~~ 212 (397)
.+++||=.|++.| .++..|++.|++|++++.+++..+.+.+.+... . ++.++.+|+.+....+.+.+ ..+
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-- 82 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK-- 82 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH--
Confidence 3567888886543 234445556999999999988776665554332 2 68999999987643222211 112
Q ss_pred cCCCCcceEeecC
Q 015990 213 KSSSGFAKVVANI 225 (397)
Q Consensus 213 ~~~~~~d~Vv~Nl 225 (397)
..+..|.+|.|-
T Consensus 83 -~~g~iD~lv~nA 94 (280)
T 1xkq_A 83 -QFGKIDVLVNNA 94 (280)
T ss_dssp -HHSCCCEEEECC
T ss_pred -hcCCCCEEEECC
Confidence 124688888875
No 372
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=88.63 E-value=2 Score=39.07 Aligned_cols=81 Identities=10% Similarity=0.137 Sum_probs=52.1
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
.+++||=.|++.| ++ ..|++.|++|+.++.+++..+.+.+.+... .++.++.+|+.+........+ ..+ .
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~ 81 (262)
T 1zem_A 6 NGKVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR---D 81 (262)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH---H
Confidence 4578888886544 44 445556999999999988776665555433 378899999887642211111 212 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 82 ~g~id~lv~nA 92 (262)
T 1zem_A 82 FGKIDFLFNNA 92 (262)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 24678888774
No 373
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=88.61 E-value=1.8 Score=39.68 Aligned_cols=79 Identities=10% Similarity=0.106 Sum_probs=53.2
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+. .++.++.+|+.+..-...+.+..+ ..+.
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~---~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG--NRAEFVSTNVTSEDSVLAAIEAAN---QLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHT---TSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHH---HhCC
Confidence 4678888887654 2345556679999999999988877766663 479999999987653222222222 2346
Q ss_pred cceEeec
Q 015990 218 FAKVVAN 224 (397)
Q Consensus 218 ~d~Vv~N 224 (397)
.|.+|.|
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 7777766
No 374
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=88.52 E-value=1.8 Score=38.88 Aligned_cols=81 Identities=16% Similarity=0.181 Sum_probs=50.9
Q ss_pred CCCEEEEEcCcccHHHHHH----HHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhh-hHHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHML-SLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~L----a~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~-~~~~~~~~ 214 (397)
.+++||=.|++ |.++..+ ++.|++|++++.+++..+.+.+.+.. .+++.++.+|+.+...-.... ...+ .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~ 87 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE---Q 87 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH---H
Confidence 45788888854 5555444 45689999999998766655544433 247999999998754221111 1111 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.||.|-
T Consensus 88 ~~~id~vi~~A 98 (260)
T 3awd_A 88 EGRVDILVACA 98 (260)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 24678888774
No 375
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=88.52 E-value=2.2 Score=40.89 Aligned_cols=62 Identities=18% Similarity=0.134 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHHcCCcEEEEeCC-HHHHHHHHHHhccC-----------------------CceEEEEcc
Q 015990 140 QEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKD-QHMVGLVRERFASI-----------------------DQLKVLQED 195 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~lt~~La~~~~~V~~vE~d-~~~i~~a~~~~~~~-----------------------~~v~ii~gD 195 (397)
.+...|+.+|||..+....|...+..+.-+|+| |+.++.-++.+... ++.+++-+|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 355789999999999999998864456666666 77776655554332 478899999
Q ss_pred ccccch
Q 015990 196 FVKCHI 201 (397)
Q Consensus 196 ~~~~~~ 201 (397)
+.+.+.
T Consensus 176 L~d~~w 181 (334)
T 1rjd_A 176 LNDITE 181 (334)
T ss_dssp TTCHHH
T ss_pred CCCcHH
Confidence 988643
No 376
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=88.49 E-value=1.5 Score=41.66 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=59.3
Q ss_pred hcCCCCCEEEEEcC--cccHHHHHHHH-cCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhc
Q 015990 137 AAVQEGDIVLEIGP--GTGSLTNVLLN-AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 137 ~~~~~~~~VLEIG~--G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
+.++++++||-+|+ |.|..+..+++ .|++|++++.+++..+.+++. .. . .++ |..+.+..+.+ .+..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-ga--~-~~~--d~~~~~~~~~~----~~~~ 231 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-GA--D-ETV--NYTHPDWPKEV----RRLT 231 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC--S-EEE--ETTSTTHHHHH----HHHT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CC--C-EEE--cCCcccHHHHH----HHHh
Confidence 46778999999998 67888877776 488999999999988888653 21 1 222 32222221111 1111
Q ss_pred CCCCcceEeecCCCcCcHHHHHHhccCCC
Q 015990 214 SSSGFAKVVANIPFNISTDVIKQLLPMGD 242 (397)
Q Consensus 214 ~~~~~d~Vv~NlPy~i~s~il~~L~~~g~ 242 (397)
....+|+|+-+..-......+..+.++|.
T Consensus 232 ~~~~~d~vi~~~g~~~~~~~~~~l~~~G~ 260 (343)
T 2eih_A 232 GGKGADKVVDHTGALYFEGVIKATANGGR 260 (343)
T ss_dssp TTTCEEEEEESSCSSSHHHHHHHEEEEEE
T ss_pred CCCCceEEEECCCHHHHHHHHHhhccCCE
Confidence 22468999888763333445555555553
No 377
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=88.42 E-value=1.6 Score=39.95 Aligned_cols=83 Identities=16% Similarity=0.240 Sum_probs=54.3
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc--CCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~--~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++-.+.+.+.+.. ..++.++.+|+.+....+.+.+...+ ..
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE--AF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH--Hc
Confidence 46788888865442 3445556799999999998877766555432 34799999999887543222222211 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 97 g~id~lv~nA 106 (266)
T 4egf_A 97 GGLDVLVNNA 106 (266)
T ss_dssp TSCSEEEEEC
T ss_pred CCCCEEEECC
Confidence 4688888774
No 378
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=88.36 E-value=2.1 Score=39.50 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCcccH---HHHHHHHcCCcEEEEeC-CHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcC
Q 015990 140 QEGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~-d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
..+++||=.|++.|. ++..|++.|++|+.++. +++..+.+.+.+.. .+++.++.+|+.+......+.+...+ .
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 104 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA--E 104 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH--H
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH--H
Confidence 356788888865542 34555667999999995 77666655555443 34899999999887543222222211 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 105 ~g~iD~lvnnAg 116 (280)
T 4da9_A 105 FGRIDCLVNNAG 116 (280)
T ss_dssp HSCCCEEEEECC
T ss_pred cCCCCEEEECCC
Confidence 246888887753
No 379
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.35 E-value=1.2 Score=41.15 Aligned_cols=83 Identities=14% Similarity=0.133 Sum_probs=56.5
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
+|+.+|=-|.+.|. ++..|++.|++|+..|++++.++.+.+.+... +++..+.+|+.+...-+.+.+... ...+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~--~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLD--AEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH--HTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH--HHCC
Confidence 46788888876553 24566667999999999998877766655443 488899999987643322222222 1346
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|++|.|-
T Consensus 86 ~iDiLVNNA 94 (255)
T 4g81_D 86 HVDILINNA 94 (255)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 789999885
No 380
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=88.30 E-value=1.9 Score=39.71 Aligned_cols=81 Identities=14% Similarity=0.191 Sum_probs=53.3
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++.++.+.+... +++.++.+|+.+......+.+...+ ..+.
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~ 79 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG--GNAVGVVGDVRSLQDQKRAAERCLA--AFGK 79 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB--TTEEEEECCTTCHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHHHHHH--hcCC
Confidence 3578888887654 2345556679999999999987776655542 4789999999876432222221111 1256
Q ss_pred cceEeecC
Q 015990 218 FAKVVANI 225 (397)
Q Consensus 218 ~d~Vv~Nl 225 (397)
.|.+|.|-
T Consensus 80 iD~lvnnA 87 (281)
T 3zv4_A 80 IDTLIPNA 87 (281)
T ss_dssp CCEEECCC
T ss_pred CCEEEECC
Confidence 88888774
No 381
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.28 E-value=2.1 Score=39.37 Aligned_cols=85 Identities=14% Similarity=0.078 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCcccH---HHHHHHHcCCcEEEEeC-------------CHHHHHHHHHHhccC-CceEEEEccccccchh
Q 015990 140 QEGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-------------DQHMVGLVRERFASI-DQLKVLQEDFVKCHIR 202 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~-------------d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~ 202 (397)
-.+++||=.|++.|. ++..|++.|++|+.++. +++.++.+.+.+... .++.++.+|+.+...-
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 356788988876542 34555667999999998 666666665555443 4889999999876432
Q ss_pred hhhhhHHhhhcCCCCcceEeecCC
Q 015990 203 SHMLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 203 ~~~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
+.+.+...+ ..+..|.+|.|--
T Consensus 93 ~~~~~~~~~--~~g~id~lvnnAg 114 (280)
T 3pgx_A 93 RELVADGME--QFGRLDVVVANAG 114 (280)
T ss_dssp HHHHHHHHH--HHCCCCEEEECCC
T ss_pred HHHHHHHHH--HcCCCCEEEECCC
Confidence 222221111 1246888888743
No 382
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=88.28 E-value=2.2 Score=38.50 Aligned_cols=80 Identities=15% Similarity=0.165 Sum_probs=50.1
Q ss_pred CCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhh-hHHhhhcCC
Q 015990 142 GDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHML-SLFERRKSS 215 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~-~~~~~~~~~ 215 (397)
+++||=.|++ |.++ ..|++.|++|+.++.+++..+.+.+.+.. .+++.++.+|+.+...-..+. ...+ ..
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~~ 77 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARK---TL 77 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH---HT
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH---Hh
Confidence 3567777854 4444 44555689999999998776655554433 247889999988754221111 1112 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 78 g~id~lv~nA 87 (256)
T 1geg_A 78 GGFDVIVNNA 87 (256)
T ss_dssp TCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4688888875
No 383
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.15 E-value=1.1 Score=42.61 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=41.7
Q ss_pred HHHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CCcEEEEeCCHHHHHHHHHH
Q 015990 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~ 182 (397)
.+....++++++||-+|+|. |.++..+++. |++|++++.+++-.+.+++.
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 44556788999999999975 8888888875 88999999999999888763
No 384
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=88.14 E-value=1.6 Score=39.45 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=53.9
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+ ..++.++.+|+.+...-+.+.+...+ ..+.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~ 80 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGSVKALFAEIQA--LTGG 80 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHH--HCCC
Confidence 46788888865442 34555667999999999998877766655 24788999999876432222221111 1246
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
.|.+|.|--
T Consensus 81 id~lv~nAg 89 (247)
T 3rwb_A 81 IDILVNNAS 89 (247)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 888887743
No 385
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.14 E-value=2.4 Score=38.83 Aligned_cols=84 Identities=14% Similarity=0.143 Sum_probs=52.3
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++ |.++ ..|++.|++|+.++.+++..+.+.+.+.. ..++.++.+|+.+....+.+.+...+ ...
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH-VFD 97 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-HTT
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 46788888864 4444 44455689999999998776655554433 24788999999876432222211111 011
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 98 g~id~lv~nAg 108 (273)
T 1ae1_A 98 GKLNILVNNAG 108 (273)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 56888888753
No 386
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=88.14 E-value=1.8 Score=40.26 Aligned_cols=83 Identities=17% Similarity=0.149 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCC------------HHHHHHHHHHhcc-CCceEEEEccccccchhhh
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d------------~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~ 204 (397)
.++++|=.|++.|. ++..|++.|++|+.++.+ ++.++.+.+.+.. .+++.++.+|+.+......
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 46789988976542 345566679999999987 5555544444433 3489999999987653222
Q ss_pred hhhHHhhhcCCCCcceEeecC
Q 015990 205 MLSLFERRKSSSGFAKVVANI 225 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~Nl 225 (397)
+.+...+ ..+..|.+|.|-
T Consensus 107 ~~~~~~~--~~g~iD~lv~nA 125 (299)
T 3t7c_A 107 AVDDGVT--QLGRLDIVLANA 125 (299)
T ss_dssp HHHHHHH--HHSCCCEEEECC
T ss_pred HHHHHHH--HhCCCCEEEECC
Confidence 2221111 125688888774
No 387
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.11 E-value=1.9 Score=39.51 Aligned_cols=83 Identities=17% Similarity=0.112 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCC------------HHHHHHHHHHhcc-CCceEEEEccccccchhhh
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d------------~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~ 204 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+ .+..+.+...+.. ..++.++.+|+.+......
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 46789988875442 345556679999999987 6555555544433 3489999999987643221
Q ss_pred hh-hHHhhhcCCCCcceEeecCC
Q 015990 205 ML-SLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 205 ~~-~~~~~~~~~~~~d~Vv~NlP 226 (397)
+. ...+ ..+..|.+|.|--
T Consensus 89 ~~~~~~~---~~g~id~lv~nAg 108 (287)
T 3pxx_A 89 ELANAVA---EFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHH---HHSCCCEEEECCC
T ss_pred HHHHHHH---HcCCCCEEEECCC
Confidence 21 2222 1246888887743
No 388
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=88.05 E-value=2.1 Score=38.83 Aligned_cols=82 Identities=11% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhcc--CCceEEEEccccccchhhhhhh-HHhhhc
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLS-LFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~--~~~v~ii~gD~~~~~~~~~~~~-~~~~~~ 213 (397)
.+++||=.|++ |.++ ..|++.|++|++++.+++-.+.+.+.+.. ..++.++.+|+.+...-..+.+ ..+
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--- 81 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS--- 81 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH---
Confidence 35688888865 4444 44555689999999998766655444432 2478899999987642221111 111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|--
T Consensus 82 ~~g~id~lv~~Ag 94 (263)
T 3ai3_A 82 SFGGADILVNNAG 94 (263)
T ss_dssp HHSSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1246788887753
No 389
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=88.03 E-value=1 Score=38.27 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=48.5
Q ss_pred CCchHHHHHhhhc--CHHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH--hhcccCCC
Q 015990 334 KRKMLRKSLQHLC--TSLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLI--SYGSRQWF 396 (397)
Q Consensus 334 rRK~l~n~L~~~~--~~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~--~~~~~~~~ 396 (397)
..|.+.-+|..++ .......+++.+||+++.|+. +||.+|..+|.+.... .|.--.||
T Consensus 22 ~~k~v~~ALt~I~GIG~~~A~~I~~~~gid~~~r~g-----~Lt~~ei~~l~~~i~~~~~~~ip~w~ 83 (152)
T 3iz6_M 22 GKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAG-----ELSAEEMDRLMAVVHNPRQFKVPDWF 83 (152)
T ss_dssp CSSBHHHHHTTSTTCCHHHHHHHHHHHTCCSSSBTT-----TSCHHHHHHHHHHHHSCSSCCCCCCS
T ss_pred CCcEeHhhhhhccCcCHHHHHHHHHHcCCCCCcEeC-----cCCHHHHHHHHHHHHhhcccCcchhh
Confidence 4677888888765 566778899999999999999 9999999999998764 57766776
No 390
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.02 E-value=1.9 Score=39.10 Aligned_cols=81 Identities=19% Similarity=0.289 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. +++.++.+|+.+....+.+.+...+ ..+.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~ 82 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQ--TLGA 82 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHH--HHSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHH--HhCC
Confidence 46789988965442 244555679999999999988877766653 4789999999876532222222211 1246
Q ss_pred cceEeecC
Q 015990 218 FAKVVANI 225 (397)
Q Consensus 218 ~d~Vv~Nl 225 (397)
.|.+|.|-
T Consensus 83 id~lv~nA 90 (255)
T 4eso_A 83 IDLLHINA 90 (255)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 88888774
No 391
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.96 E-value=1.9 Score=40.16 Aligned_cols=81 Identities=11% Similarity=0.158 Sum_probs=56.0
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
+|+.+|=-|.+.|. ++..|++.|++|+.++.+++.++.+.+.+. +++..+.+|+.+....+.+.+...+ ..+.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~--~~G~ 103 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKA--EAGR 103 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHH--HcCC
Confidence 57888888876653 345566679999999999998887766653 4678889999876543322222211 2367
Q ss_pred cceEeecC
Q 015990 218 FAKVVANI 225 (397)
Q Consensus 218 ~d~Vv~Nl 225 (397)
.|++|.|-
T Consensus 104 iDiLVNNA 111 (273)
T 4fgs_A 104 IDVLFVNA 111 (273)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 89988884
No 392
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=87.95 E-value=2.1 Score=39.79 Aligned_cols=81 Identities=17% Similarity=0.113 Sum_probs=51.8
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
.+++||=.|++ |.++. .|++.|++|++++.+++..+.+.+.+.. ..++.++.+|+.+...-+.+.+ ..+ .
T Consensus 33 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~---~ 108 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIES---E 108 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH---H
Confidence 46788888865 44444 4455689999999998776665554433 2478899999987643221211 112 2
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 109 ~g~iD~lvnnA 119 (291)
T 3cxt_A 109 VGIIDILVNNA 119 (291)
T ss_dssp TCCCCEEEECC
T ss_pred cCCCcEEEECC
Confidence 24688888774
No 393
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.82 E-value=1.7 Score=41.78 Aligned_cols=48 Identities=19% Similarity=0.297 Sum_probs=38.5
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~ 181 (397)
.+.+.++++++||-+|+|. |.++..+++. |+ +|++++.+++-.+.+++
T Consensus 185 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 3456788999999999864 7777777774 77 79999999998888875
No 394
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=87.73 E-value=1.3 Score=42.24 Aligned_cols=98 Identities=20% Similarity=0.289 Sum_probs=59.9
Q ss_pred HHhcCCCCCEEEEEcC--cccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhh
Q 015990 135 AAAAVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG~--G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
+...++++++||=+|+ |.|.++..+++. |++|++++.+++-.+.+++. +.-.++..+ .+ +.+.+ .+
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~v~~~~-~~--~~~~v----~~ 221 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GADIVLPLE-EG--WAKAV----RE 221 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCSEEEESS-TT--HHHHH----HH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCcEEecCc-hh--HHHHH----HH
Confidence 4567889999999997 568888877775 88999999999888888764 211233322 11 11111 11
Q ss_pred hcCCCCcceEeecCCCcCcHHHHHHhccCCCc
Q 015990 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMGDI 243 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~ 243 (397)
......+|+|+-+..-......+..+.++|.+
T Consensus 222 ~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~i 253 (342)
T 4eye_A 222 ATGGAGVDMVVDPIGGPAFDDAVRTLASEGRL 253 (342)
T ss_dssp HTTTSCEEEEEESCC--CHHHHHHTEEEEEEE
T ss_pred HhCCCCceEEEECCchhHHHHHHHhhcCCCEE
Confidence 11223688888776544444555555555543
No 395
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=87.58 E-value=1.7 Score=39.65 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=53.1
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeC-CHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~-d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++.|. ++..|++.|++|+.++. +++..+.+.+.+... .++.++.+|+.+......+.+...+ ..
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ--SD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hc
Confidence 46788888876542 34555667999999998 666666665555433 4899999999876432222221111 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 106 g~id~li~nAg 116 (271)
T 4iin_A 106 GGLSYLVNNAG 116 (271)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46888887743
No 396
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=87.50 E-value=1.2 Score=41.01 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=54.0
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+.. .+++.++.+|+.+......+.+...+ . +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--~-g 108 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA--I-A 108 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH--H-S
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH--h-C
Confidence 46788888865442 3445556799999999988766665555433 34899999999876543222222221 2 5
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 109 ~iD~lvnnAg 118 (275)
T 4imr_A 109 PVDILVINAS 118 (275)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7888887743
No 397
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=87.47 E-value=1.2 Score=41.52 Aligned_cols=82 Identities=17% Similarity=0.207 Sum_probs=54.4
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
.+++||=.|.+.|. ++..|++.|++|+.++.+++..+.+.+.+... +++.++.+|+.+......+.+ +.+ .
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~---~ 116 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD---A 116 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH---H
Confidence 46788888865442 34555667999999999988777766666543 378999999987643222222 222 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 117 ~g~iD~lvnnA 127 (293)
T 3rih_A 117 FGALDVVCANA 127 (293)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 25678888774
No 398
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.41 E-value=2 Score=40.56 Aligned_cols=83 Identities=17% Similarity=0.138 Sum_probs=53.7
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-C--ceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-D--QLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~--~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|++.|. ++..|++.|.+|++++.+++-.+.+.+.+... + ++.++.+|+.+..--+.+.+...+ .
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA--R 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH--h
Confidence 46789989976442 34455567999999999998777666555322 2 799999999876432222221111 2
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 85 ~g~id~lv~nA 95 (319)
T 3ioy_A 85 FGPVSILCNNA 95 (319)
T ss_dssp TCCEEEEEECC
T ss_pred CCCCCEEEECC
Confidence 24678888774
No 399
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=87.40 E-value=2.4 Score=37.90 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=52.8
Q ss_pred CCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 142 GDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 142 ~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+. .++.++.+|+.+..--+.+.+...+ ..+..
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~--~~g~i 78 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--NAVIGIVADLAHHEDVDVAFAAAVE--WGGLP 78 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTSHHHHHHHHHHHHH--HHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHH--hcCCC
Confidence 4578888865442 344555679999999999988877766663 2689999999876432222221111 12468
Q ss_pred ceEeecCC
Q 015990 219 AKVVANIP 226 (397)
Q Consensus 219 d~Vv~NlP 226 (397)
|.+|.|--
T Consensus 79 d~lvnnAg 86 (235)
T 3l6e_A 79 ELVLHCAG 86 (235)
T ss_dssp SEEEEECC
T ss_pred cEEEECCC
Confidence 88887754
No 400
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=87.38 E-value=1.3 Score=40.79 Aligned_cols=83 Identities=11% Similarity=0.102 Sum_probs=53.0
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... .++.++.+|+.+....+.+.+...+ ..+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK--EFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH--HcC
Confidence 46788888865432 34555667999999999998777666555432 3788899999876432222221111 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 105 ~iD~lvnnA 113 (270)
T 3ftp_A 105 ALNVLVNNA 113 (270)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 688888874
No 401
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=87.30 E-value=1.3 Score=42.36 Aligned_cols=49 Identities=27% Similarity=0.359 Sum_probs=40.2
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~ 182 (397)
++.+.++++++||-+|+|. |.++..+++. |+ +|+++|.+++-.+.+++.
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 215 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI 215 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 3566888999999999875 7777777774 77 899999999988888753
No 402
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=87.27 E-value=0.8 Score=45.63 Aligned_cols=64 Identities=25% Similarity=0.386 Sum_probs=45.0
Q ss_pred CccCCCHHHH--------HHHHHHhcCCCCCEEEEEcCcccHHHHHHHHc----C---CcEEEEeCCHHHHHHHHHHhc
Q 015990 121 QHYMLNSEIN--------DQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNA----G---ATVLAIEKDQHMVGLVRERFA 184 (397)
Q Consensus 121 Qnfl~~~~i~--------~~i~~~~~~~~~~~VLEIG~G~G~lt~~La~~----~---~~V~~vE~d~~~i~~a~~~~~ 184 (397)
-.|++.|++- .++++.......-.|+|+|+|.|.+..-+++. + .+++.||+|+.+.+.-++++.
T Consensus 109 GDFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 109 SDFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp -CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 5899986653 33333332222468999999999998777652 2 379999999999887777664
No 403
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.27 E-value=1.7 Score=40.98 Aligned_cols=97 Identities=16% Similarity=0.232 Sum_probs=58.0
Q ss_pred HHhcCCCCCEEEEEc--CcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhh
Q 015990 135 AAAAVQEGDIVLEIG--PGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG--~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
+...++++++||=+| .|.|..+..+++. |++|++++.+++-.+.+++. +--.++.. .+.++.+.+.+.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~~~~~~--~~~~~~~~~~~~--- 204 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GAWETIDY--SHEDVAKRVLEL--- 204 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCSEEEET--TTSCHHHHHHHH---
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCCEEEeC--CCccHHHHHHHH---
Confidence 345778999999998 3567777777774 88999999999988888763 21122222 122221111111
Q ss_pred hcCCCCcceEeecCCCcCcHHHHHHhccCC
Q 015990 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMG 241 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g 241 (397)
.....+|+|+-+..-......+..+.++|
T Consensus 205 -~~~~g~Dvvid~~g~~~~~~~~~~l~~~G 233 (325)
T 3jyn_A 205 -TDGKKCPVVYDGVGQDTWLTSLDSVAPRG 233 (325)
T ss_dssp -TTTCCEEEEEESSCGGGHHHHHTTEEEEE
T ss_pred -hCCCCceEEEECCChHHHHHHHHHhcCCC
Confidence 12346888887766433334444444444
No 404
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.27 E-value=1.8 Score=40.97 Aligned_cols=98 Identities=21% Similarity=0.302 Sum_probs=59.7
Q ss_pred HhcCCCCCEEEEEcC--cccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh
Q 015990 136 AAAVQEGDIVLEIGP--GTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 136 ~~~~~~~~~VLEIG~--G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
...++++++||=+|+ |.|..+..+++. |++|++++.+++-.+.+++. +.-.++..+ +.++.+.+.+.
T Consensus 143 ~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~~~~~~--~~~~~~~~~~~---- 212 (334)
T 3qwb_A 143 AYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GAEYLINAS--KEDILRQVLKF---- 212 (334)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEEEETT--TSCHHHHHHHH----
T ss_pred hccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCcEEEeCC--CchHHHHHHHH----
Confidence 346789999999994 567777777764 88999999999988887663 211222221 12221111111
Q ss_pred cCCCCcceEeecCCCcCcHHHHHHhccCCCc
Q 015990 213 KSSSGFAKVVANIPFNISTDVIKQLLPMGDI 243 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~~ 243 (397)
.....+|+|+-+..-......+..+.++|.+
T Consensus 213 ~~~~g~D~vid~~g~~~~~~~~~~l~~~G~i 243 (334)
T 3qwb_A 213 TNGKGVDASFDSVGKDTFEISLAALKRKGVF 243 (334)
T ss_dssp TTTSCEEEEEECCGGGGHHHHHHHEEEEEEE
T ss_pred hCCCCceEEEECCChHHHHHHHHHhccCCEE
Confidence 1234689998777654444555555555543
No 405
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=87.22 E-value=1.3 Score=40.09 Aligned_cols=85 Identities=14% Similarity=0.101 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCc-ccHH----HHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcC
Q 015990 140 QEGDIVLEIGPG-TGSL----TNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 140 ~~~~~VLEIG~G-~G~l----t~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.++++||=.|++ +|.+ +..|++.|++|+.++.+.+..+.+++.....+++.++.+|+.+..-...+.+...+ .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT--H 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH--H
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH--H
Confidence 457889999964 2333 45556679999999988666555555544445788999999876532222222211 2
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 90 ~g~id~lv~nAg 101 (271)
T 3ek2_A 90 WDSLDGLVHSIG 101 (271)
T ss_dssp CSCEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 256888887753
No 406
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=87.17 E-value=2.3 Score=39.28 Aligned_cols=82 Identities=10% Similarity=0.187 Sum_probs=52.0
Q ss_pred CCCEEEEEcCcccHHHHHH----HHcCCcEEEEeCCHHHHHHHHHHhcc------CCceEEEEccccccchhhhhhh-HH
Q 015990 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFAS------IDQLKVLQEDFVKCHIRSHMLS-LF 209 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~L----a~~~~~V~~vE~d~~~i~~a~~~~~~------~~~v~ii~gD~~~~~~~~~~~~-~~ 209 (397)
.+++||=.|++ |.++..+ ++.|++|++++.+++..+.+.+.+.. ..++.++.+|+.+...-..+.+ ..
T Consensus 17 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 35789988854 5555544 45689999999998776665554432 2479999999987542221111 11
Q ss_pred hhhcCCCCcceEeecCC
Q 015990 210 ERRKSSSGFAKVVANIP 226 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlP 226 (397)
+ ..+..|.||.|--
T Consensus 96 ~---~~g~id~li~~Ag 109 (303)
T 1yxm_A 96 D---TFGKINFLVNNGG 109 (303)
T ss_dssp H---HHSCCCEEEECCC
T ss_pred H---HcCCCCEEEECCC
Confidence 1 1246788887743
No 407
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=87.05 E-value=2.4 Score=38.91 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=51.6
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCC------------HHHHHHHHHHhcc-CCceEEEEccccccchhhh
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKD------------QHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d------------~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~ 204 (397)
.+++||=.|++.| .++..|++.|++|+.++.+ .+.++...+.+.. .+++.++.+|+.+...-+.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 4678998897654 2345556679999999986 4444444443333 3488999999987643222
Q ss_pred hhhHHhhhcCCCCcceEeecCC
Q 015990 205 MLSLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 205 ~~~~~~~~~~~~~~d~Vv~NlP 226 (397)
+.+...+ ..+..|.+|.|--
T Consensus 89 ~~~~~~~--~~g~id~lv~nAg 108 (281)
T 3s55_A 89 FVAEAED--TLGGIDIAITNAG 108 (281)
T ss_dssp HHHHHHH--HHTCCCEEEECCC
T ss_pred HHHHHHH--hcCCCCEEEECCC
Confidence 2221111 1246888887743
No 408
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.04 E-value=1.4 Score=42.49 Aligned_cols=87 Identities=18% Similarity=0.156 Sum_probs=56.2
Q ss_pred CCEEEEEcCc-ccHHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcce
Q 015990 142 GDIVLEIGPG-TGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (397)
Q Consensus 142 ~~~VLEIG~G-~G~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~ 220 (397)
..+|+=+||| +|......+.....|+..|++.+.++.+++ .+..+..|+.+.+- +.+.+ ...|+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~~---l~~~~------~~~Dv 80 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE------FATPLKVDASNFDK---LVEVM------KEFEL 80 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT------TSEEEECCTTCHHH---HHHHH------TTCSE
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc------cCCcEEEecCCHHH---HHHHH------hCCCE
Confidence 3579999985 344333333345689999999988776643 34556777765431 11111 35789
Q ss_pred EeecCCCcCcHHHHHHhccCCCc
Q 015990 221 VVANIPFNISTDVIKQLLPMGDI 243 (397)
Q Consensus 221 Vv~NlPy~i~s~il~~L~~~g~~ 243 (397)
||+-+|++...++.+.+++.|..
T Consensus 81 Vi~~~p~~~~~~v~~~~~~~g~~ 103 (365)
T 3abi_A 81 VIGALPGFLGFKSIKAAIKSKVD 103 (365)
T ss_dssp EEECCCGGGHHHHHHHHHHHTCE
T ss_pred EEEecCCcccchHHHHHHhcCcc
Confidence 99889988777887777665544
No 409
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=86.99 E-value=2.1 Score=38.57 Aligned_cols=81 Identities=19% Similarity=0.285 Sum_probs=53.2
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+. .+...+.+|+.+...-+.+.+...+ ..+.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g~ 83 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--DNGKGMALNVTNPESIEAVLKAITD--EFGG 83 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHH--HHCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--ccceEEEEeCCCHHHHHHHHHHHHH--HcCC
Confidence 4678888887654 2345566679999999999988777666654 2578889998876432222221111 1246
Q ss_pred cceEeecC
Q 015990 218 FAKVVANI 225 (397)
Q Consensus 218 ~d~Vv~Nl 225 (397)
.|.+|.|-
T Consensus 84 iD~lv~nA 91 (248)
T 3op4_A 84 VDILVNNA 91 (248)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 88888874
No 410
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=86.90 E-value=2.5 Score=38.73 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeC-------------CHHHHHHHHHHhcc-CCceEEEEccccccchhh
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-------------DQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRS 203 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~-------------d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~ 203 (397)
.++++|=.|++.|. ++..|++.|++|+.++. +++.++.+.+.+.. .+++.++.+|+.+...-.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 46788888876542 34556667999999998 56665555444433 347899999998765322
Q ss_pred hhhhHHhhhcCCCCcceEeecC
Q 015990 204 HMLSLFERRKSSSGFAKVVANI 225 (397)
Q Consensus 204 ~~~~~~~~~~~~~~~d~Vv~Nl 225 (397)
.+.+...+ ..+..|.+|.|-
T Consensus 90 ~~~~~~~~--~~g~id~lvnnA 109 (277)
T 3tsc_A 90 KVVDDGVA--ALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHH--HHSCCCEEEECC
T ss_pred HHHHHHHH--HcCCCCEEEECC
Confidence 22221111 125688988875
No 411
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=86.86 E-value=2.2 Score=38.64 Aligned_cols=81 Identities=16% Similarity=0.133 Sum_probs=50.5
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
.+++||=.|++ |.++. .|++.|++|+.++.+++..+.+.+.+.. ..++.++.+|+.+........+ ..+ .
T Consensus 13 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~ 88 (260)
T 2zat_A 13 ENKVALVTAST-DGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN---L 88 (260)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH---H
Confidence 45678888854 44444 4455689999999998766655544433 2478889999877542211111 111 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 89 ~g~iD~lv~~A 99 (260)
T 2zat_A 89 HGGVDILVSNA 99 (260)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 24678888774
No 412
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=86.86 E-value=1.9 Score=41.46 Aligned_cols=48 Identities=23% Similarity=0.251 Sum_probs=38.7
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~ 181 (397)
.+.+.++++++||-+|+|. |.++..+++. |+ +|+++|.+++-.+.+++
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 3456788999999999864 7777777774 77 79999999998888875
No 413
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=86.80 E-value=2.8 Score=38.59 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=53.3
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+... +++.++.+|+.+....+.+.+...+ ..+.
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g~ 101 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG--SKAFGVRVDVSSAKDAESMVEKTTA--KWGR 101 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHH--HcCC
Confidence 46788888876542 345556679999999999887766655542 4788999999876432222221111 1246
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
.|.+|.|--
T Consensus 102 iD~lv~nAg 110 (277)
T 4dqx_A 102 VDVLVNNAG 110 (277)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 888887743
No 414
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.79 E-value=2.5 Score=38.32 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=51.5
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhcc---CCceEEEEccccccchhhhhhh-HHhhh
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSHMLS-LFERR 212 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~---~~~v~ii~gD~~~~~~~~~~~~-~~~~~ 212 (397)
.+++||=.|++ |.++ ..|++.|++|++++.+++..+.+.+.+.. ..++.++.+|+.+...-....+ ..+
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-- 82 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD-- 82 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH--
Confidence 45688888864 4444 44555699999999998776655554432 1368899999887542211111 111
Q ss_pred cCCCCcceEeecCC
Q 015990 213 KSSSGFAKVVANIP 226 (397)
Q Consensus 213 ~~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|--
T Consensus 83 -~~g~id~lv~~Ag 95 (267)
T 2gdz_A 83 -HFGRLDILVNNAG 95 (267)
T ss_dssp -HHSCCCEEEECCC
T ss_pred -HcCCCCEEEECCC
Confidence 1246788888753
No 415
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=86.79 E-value=2.3 Score=37.75 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=51.1
Q ss_pred CCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhc--cCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 142 GDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFA--SIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 142 ~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~--~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
+++||=.|++.| .++..|++.|++|+.++.+++-.+.+.+.+. ...++.++.+|+.+..--..+.+...+ ..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE--RFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH--HHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH--hcC
Confidence 457887886543 1344555568999999999887766555442 234889999999876432211111111 124
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 80 ~id~li~~Ag 89 (235)
T 3l77_A 80 DVDVVVANAG 89 (235)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 6888887743
No 416
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=86.78 E-value=1.9 Score=38.56 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=51.3
Q ss_pred CCCEEEEEcCcccHHHHHHH----HcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLTNVLL----NAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La----~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|+ +|.++..++ +.|.+|++++.+++..+.+.+.+.. .+++.++.+|+.+...-+...+...+ ..
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 86 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS--KL 86 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH--hc
Confidence 4567887774 566655554 4588999999998776655554433 24788999998875422211111111 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.||.|--
T Consensus 87 ~~~d~vi~~Ag 97 (255)
T 1fmc_A 87 GKVDILVNNAG 97 (255)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46788887743
No 417
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=86.63 E-value=2.9 Score=37.22 Aligned_cols=80 Identities=13% Similarity=0.152 Sum_probs=50.3
Q ss_pred CCEEEEEcCcccHHHHH----HHHcCCcEEEEeCCHHHHHHHHHHh-ccC-CceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 142 GDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERF-ASI-DQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~d~~~i~~a~~~~-~~~-~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
+++||=.|++ |.++.. |++.|++|++++.+++-.+.+.+.+ ... +++.++.+|+.+...-..+.+ ..+ .
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~ 77 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATME---Q 77 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH---H
Confidence 4577878854 555444 4556899999999987776665554 222 378999999987643221111 111 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.||.|-
T Consensus 78 ~~~id~li~~A 88 (250)
T 2cfc_A 78 FGAIDVLVNNA 88 (250)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 24678888775
No 418
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=86.63 E-value=1.6 Score=40.12 Aligned_cols=81 Identities=12% Similarity=0.225 Sum_probs=50.4
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|++ |.++. .|++.|.+|++++.+++-.+.+.+.+... .++.++.+|+.+....+.+.+...+ .
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~--~ 103 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK--L 103 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH--H
Confidence 35788888864 44544 44556899999999988776655444321 3688999999875432222211111 1
Q ss_pred CCCcceEeec
Q 015990 215 SSGFAKVVAN 224 (397)
Q Consensus 215 ~~~~d~Vv~N 224 (397)
.+..|.+|.|
T Consensus 104 ~g~iD~li~n 113 (286)
T 1xu9_A 104 MGGLDMLILN 113 (286)
T ss_dssp HTSCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 2467888876
No 419
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.61 E-value=2.2 Score=40.94 Aligned_cols=49 Identities=16% Similarity=0.298 Sum_probs=38.9
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~ 182 (397)
.+.+.++++++||-+|+|. |.++..+++. |+ +|++++.+++-.+.+++.
T Consensus 183 ~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 3456788999999999864 6677777764 77 799999999988888753
No 420
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=86.61 E-value=3.1 Score=38.37 Aligned_cols=82 Identities=17% Similarity=0.275 Sum_probs=51.4
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhcc--CCceEEEEccccccchhhhhh-hHHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHML-SLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~--~~~v~ii~gD~~~~~~~~~~~-~~~~~~~ 213 (397)
.+++||=.|++ |.++. .|++.|++|++++.+++..+.+.+.+.. ..++.++.+|+.+...-.... ...+
T Consensus 25 ~~k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--- 100 (302)
T 1w6u_A 25 QGKVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK--- 100 (302)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH---
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH---
Confidence 45688888864 44544 4455689999999998766655444422 247899999998754221111 1111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.||.|--
T Consensus 101 ~~g~id~li~~Ag 113 (302)
T 1w6u_A 101 VAGHPNIVINNAA 113 (302)
T ss_dssp HTCSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 2246788887743
No 421
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.53 E-value=1.8 Score=40.68 Aligned_cols=96 Identities=9% Similarity=0.120 Sum_probs=56.8
Q ss_pred HhcCCCCCEEEEEc--CcccHHHHHHHH-cCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh
Q 015990 136 AAAVQEGDIVLEIG--PGTGSLTNVLLN-AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 136 ~~~~~~~~~VLEIG--~G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
.+.++++++||-.| .|.|..+..+++ .|++|++++.+++..+.+++. .. . .++ |..+.+..+.+.+.
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~-g~--~-~~~--~~~~~~~~~~~~~~---- 204 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GA--W-QVI--NYREEDLVERLKEI---- 204 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TC--S-EEE--ETTTSCHHHHHHHH----
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CC--C-EEE--ECCCccHHHHHHHH----
Confidence 45678899999999 456777666665 488999999999888888763 21 1 122 22222221111111
Q ss_pred cCCCCcceEeecCCCcCcHHHHHHhccCC
Q 015990 213 KSSSGFAKVVANIPFNISTDVIKQLLPMG 241 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~i~s~il~~L~~~g 241 (397)
.....+|+++-|..-......+..+.++|
T Consensus 205 ~~~~~~D~vi~~~g~~~~~~~~~~l~~~G 233 (327)
T 1qor_A 205 TGGKKVRVVYDSVGRDTWERSLDCLQRRG 233 (327)
T ss_dssp TTTCCEEEEEECSCGGGHHHHHHTEEEEE
T ss_pred hCCCCceEEEECCchHHHHHHHHHhcCCC
Confidence 12235899988876333334444444444
No 422
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=86.51 E-value=2.2 Score=41.05 Aligned_cols=48 Identities=21% Similarity=0.322 Sum_probs=38.4
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~ 181 (397)
.+.+.++++++||-+|+|. |.++..+++. |+ +|++++.+++..+.+++
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3456788999999999865 6777777764 77 79999999998888865
No 423
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.51 E-value=2.3 Score=38.51 Aligned_cols=84 Identities=14% Similarity=0.161 Sum_probs=54.7
Q ss_pred CCCEEEEEcCc----ccH-HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhhc
Q 015990 141 EGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G----~G~-lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
.+++||=.|++ .|. ++..|++.|++|+.++.+++..+.+++..... +++.++.+|+.+...-+.+.+...+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-- 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE-- 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH--
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH--
Confidence 46788888865 443 45677778999999999876666655554433 2689999999876532222222211
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|.-
T Consensus 84 ~~g~id~li~~Ag 96 (266)
T 3oig_A 84 QVGVIHGIAHCIA 96 (266)
T ss_dssp HHSCCCEEEECCC
T ss_pred HhCCeeEEEEccc
Confidence 1246788887754
No 424
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=86.51 E-value=2.5 Score=38.82 Aligned_cols=81 Identities=10% Similarity=0.142 Sum_probs=52.3
Q ss_pred CEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh-cCCCCc
Q 015990 143 DIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR-KSSSGF 218 (397)
Q Consensus 143 ~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~-~~~~~~ 218 (397)
++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+...+++.++.+|+.+...-. .+++.. ...+..
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~---~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMS---AAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHH---HHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHH---HHHHHHHHHhCCC
Confidence 57888886544 23455666799999999998877766665543357889999998764221 122111 112467
Q ss_pred ceEeecCC
Q 015990 219 AKVVANIP 226 (397)
Q Consensus 219 d~Vv~NlP 226 (397)
|.+|.|--
T Consensus 99 D~lvnnAG 106 (272)
T 2nwq_A 99 RGLINNAG 106 (272)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 88888753
No 425
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=86.51 E-value=2.2 Score=38.22 Aligned_cols=82 Identities=15% Similarity=0.152 Sum_probs=50.0
Q ss_pred CCEEEEEcCcccHHHH----HHHHcCCcEEEEeC-CHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 142 GDIVLEIGPGTGSLTN----VLLNAGATVLAIEK-DQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~-d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
+++||=.|++ |.++. .|++.|++|+.++. +++..+.+.+.+.. .+++.++.+|+.+...-+.+.+...+ ..
T Consensus 4 ~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 80 (246)
T 2uvd_A 4 GKVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD--VF 80 (246)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 5678877754 44444 44556899999998 87766655544433 24788999998876432212111111 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 81 g~id~lv~nAg 91 (246)
T 2uvd_A 81 GQVDILVNNAG 91 (246)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46888887743
No 426
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=86.50 E-value=3 Score=37.74 Aligned_cols=82 Identities=15% Similarity=0.185 Sum_probs=50.8
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhccC--C-ceEEEEccccccchhhhhhhHHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFASI--D-QLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~-~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
.+++||=.|++ |.++. .|++.|++|++++.+++..+.+.+.+... + ++.++.+|+.+..--..+.+...+
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-- 82 (260)
T 2z1n_A 6 QGKLAVVTAGS-SGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD-- 82 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH--
Confidence 45688888865 44444 44556899999999987766555444321 3 788999998876432212111111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+ .|.+|.|--
T Consensus 83 ~~g-id~lv~~Ag 94 (260)
T 2z1n_A 83 LGG-ADILVYSTG 94 (260)
T ss_dssp TTC-CSEEEECCC
T ss_pred hcC-CCEEEECCC
Confidence 224 888888754
No 427
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=86.40 E-value=2.1 Score=39.35 Aligned_cols=82 Identities=13% Similarity=0.135 Sum_probs=53.1
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+. +++.++.+|+.+....+.+.+...+ ..+.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g~ 102 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--DDALCVPTDVTDPDSVRALFTATVE--KFGR 102 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--SCCEEEECCTTSHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHH--HcCC
Confidence 46778887865432 345555679999999999988777666653 4788999999876432222221111 1246
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
.|.+|.|--
T Consensus 103 iD~lVnnAg 111 (272)
T 4dyv_A 103 VDVLFNNAG 111 (272)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 889888743
No 428
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=86.34 E-value=2.2 Score=39.05 Aligned_cols=83 Identities=17% Similarity=0.123 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeC-CHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~-d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++.|. ++..|++.|++|+.++. +++..+.+.+.+... +++.++.+|+.+....+.+.+...+ ..
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~--~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE--RW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 46788888865442 34555667999999888 676666655554433 4789999999876532222221111 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 105 g~id~lv~nA 114 (269)
T 4dmm_A 105 GRLDVLVNNA 114 (269)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4688888874
No 429
>2vqe_M 30S ribosomal protein S13, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.156.1.1 PDB: 1gix_P* 1hnw_M* 1hnx_M* 1hnz_M* 1hr0_M 1ibk_M* 1ibl_M* 1ibm_M 1j5e_M 1jgo_P* 1jgp_P* 1jgq_P* 1mj1_P* 1ml5_P* 1n32_M* 1n33_M* 1n34_M 1n36_M 1xmo_M* 1xmq_M* ...
Probab=86.28 E-value=0.72 Score=37.94 Aligned_cols=52 Identities=15% Similarity=0.195 Sum_probs=42.8
Q ss_pred CCchHHHHHhhhc--CHHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHhh
Q 015990 334 KRKMLRKSLQHLC--TSLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLISY 390 (397)
Q Consensus 334 rRK~l~n~L~~~~--~~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~~~ 390 (397)
..|.+.-+|..++ .......+++.+||+++.|.. +||.+|...|.+.....|
T Consensus 11 ~~k~v~~aLt~I~GIG~~~A~~I~~~~gi~~~~r~~-----~Lt~~ei~~l~~~i~~~~ 64 (126)
T 2vqe_M 11 RNKRVDVALTYIYGIGKARAKEALEKTGINPATRVK-----DLTEAEVVRLREYVENTW 64 (126)
T ss_dssp CSSBHHHHHTTSSSCCSHHHHHHTTTTTCCTTSBGG-----GCCHHHHHHHHHHHHTTS
T ss_pred CCcEeeeehhccccccHHHHHHHHHHcCCCcccccC-----cCCHHHHHHHHHHHHHhC
Confidence 4567888887765 556667899999999999999 999999999998876544
No 430
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=86.25 E-value=2.6 Score=38.49 Aligned_cols=80 Identities=13% Similarity=0.265 Sum_probs=50.9
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhh-hHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML-SLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~-~~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+. .++.++.+|+.+...-+.+. ...+ ..+
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~---~~g 79 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALE---EFG 79 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHH---HHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHH---HcC
Confidence 3567888886543 2234555569999999999877666555443 47889999998764322111 1112 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 80 ~iD~lvnnA 88 (263)
T 2a4k_A 80 RLHGVAHFA 88 (263)
T ss_dssp CCCEEEEGG
T ss_pred CCcEEEECC
Confidence 678888774
No 431
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.22 E-value=2.2 Score=39.76 Aligned_cols=82 Identities=11% Similarity=0.219 Sum_probs=51.7
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHhccC-C---ceEEEEccccccchhhhhhh-HHhh
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERFASI-D---QLKVLQEDFVKCHIRSHMLS-LFER 211 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~---~v~ii~gD~~~~~~~~~~~~-~~~~ 211 (397)
.+++||=.|++. .++ ..|++.|++|+.++.+++..+.+.+.+... + ++.++.+|+.+......+.+ ..+
T Consensus 25 ~~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~- 102 (297)
T 1xhl_A 25 SGKSVIITGSSN-GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA- 102 (297)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH-
Confidence 457788888654 444 445556999999999987766655544322 2 78999999987643221211 111
Q ss_pred hcCCCCcceEeecCC
Q 015990 212 RKSSSGFAKVVANIP 226 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|--
T Consensus 103 --~~g~iD~lvnnAG 115 (297)
T 1xhl_A 103 --KFGKIDILVNNAG 115 (297)
T ss_dssp --HHSCCCEEEECCC
T ss_pred --hcCCCCEEEECCC
Confidence 1246888888753
No 432
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.20 E-value=2.1 Score=38.73 Aligned_cols=83 Identities=16% Similarity=0.186 Sum_probs=51.3
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc--CCceEEEEccc--cccchhhhhhhHHhhhc
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDF--VKCHIRSHMLSLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~--~~~v~ii~gD~--~~~~~~~~~~~~~~~~~ 213 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+.. ..++.++..|+ .+....+.+.+...+
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 88 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV-- 88 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH--
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH--
Confidence 4678888886544 23445556799999999998877766555432 13788999998 433211111111111
Q ss_pred CCCCcceEeecC
Q 015990 214 SSSGFAKVVANI 225 (397)
Q Consensus 214 ~~~~~d~Vv~Nl 225 (397)
..+..|.+|.|-
T Consensus 89 ~~g~id~lv~nA 100 (252)
T 3f1l_A 89 NYPRLDGVLHNA 100 (252)
T ss_dssp HCSCCSEEEECC
T ss_pred hCCCCCEEEECC
Confidence 235788988774
No 433
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=86.16 E-value=2.3 Score=40.07 Aligned_cols=82 Identities=15% Similarity=0.165 Sum_probs=51.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCC------------HHHHHHHHHHhcc-CCceEEEEccccccchhhh
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD------------QHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSH 204 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d------------~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~ 204 (397)
.+++||=.|++.|. ++..|++.|++|+.+|.+ ++.++.+.+.+.. ..++.++.+|+.+..--+.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 46788888876542 345566679999999886 5555444443332 3489999999987643222
Q ss_pred hhh-HHhhhcCCCCcceEeecC
Q 015990 205 MLS-LFERRKSSSGFAKVVANI 225 (397)
Q Consensus 205 ~~~-~~~~~~~~~~~d~Vv~Nl 225 (397)
+.+ ..+ ..+..|++|.|-
T Consensus 125 ~~~~~~~---~~g~iD~lVnnA 143 (317)
T 3oec_A 125 VVDEALA---EFGHIDILVSNV 143 (317)
T ss_dssp HHHHHHH---HHSCCCEEEECC
T ss_pred HHHHHHH---HcCCCCEEEECC
Confidence 222 222 125688988874
No 434
>3u5c_S 40S ribosomal protein S18-A, 40S ribosomal protein S17-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_M 3o30_L 3o2z_L 3u5g_S 1s1h_M 3jyv_M* 2zkq_m
Probab=86.12 E-value=0.75 Score=38.83 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=47.4
Q ss_pred CCchHHHHHhhhc--CHHHHHHHHHHCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH--hhcccCCC
Q 015990 334 KRKMLRKSLQHLC--TSLEIEKALGDVGLPATAAADYKFPITLPSTEYTLFMEHNLI--SYGSRQWF 396 (397)
Q Consensus 334 rRK~l~n~L~~~~--~~~~~~~~l~~~gi~~~~R~e~~~~~~L~~~~~~~l~~~~~~--~~~~~~~~ 396 (397)
..|.+.-+|..++ .......+++.+||+++.|+. +||.+|..+|.+.... .|.--.||
T Consensus 24 ~~k~v~~ALt~I~GIG~~~A~~I~~~~gid~~~r~g-----~Lt~~ei~~l~~~i~~~~~~~iP~w~ 85 (146)
T 3u5c_S 24 GNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAG-----ELTQEELERIVQIMQNPTHYKIPAWF 85 (146)
T ss_dssp SSSCTTTTGGGSTTCCHHHHHHHHHHHTCCTTSCSS-----SCCHHHHHHHHHHHTCTTTTTCCSTT
T ss_pred CCcchHhhHhhhcCCCHHHHHHHHHHcCCCCCceec-----cCCHHHHHHHHHHHHhhcccCccHHH
Confidence 4566777787765 566777899999999999999 9999999999998764 57766676
No 435
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=86.11 E-value=2.2 Score=39.08 Aligned_cols=77 Identities=19% Similarity=0.186 Sum_probs=51.1
Q ss_pred CEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh-HHhhhcCCCCc
Q 015990 143 DIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS-LFERRKSSSGF 218 (397)
Q Consensus 143 ~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~~~~~ 218 (397)
++||=-|.+.|. ++..|++.|++|+.+|++++..+.+.+ ..+++..+.+|+.+..-.+.+.+ ..+ ..+..
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~---~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---ERPNLFYFHGDVADPLTLKKFVEYAME---KLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHHH---HHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHHH---HcCCC
Confidence 567777776652 355666779999999999876654433 34578899999987643222222 222 23678
Q ss_pred ceEeecC
Q 015990 219 AKVVANI 225 (397)
Q Consensus 219 d~Vv~Nl 225 (397)
|++|.|-
T Consensus 77 DiLVNNA 83 (247)
T 3ged_A 77 DVLVNNA 83 (247)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9999885
No 436
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=86.04 E-value=2.7 Score=38.40 Aligned_cols=82 Identities=16% Similarity=0.204 Sum_probs=53.6
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+. .++.++.+|+.+....+.+.+...+ ..+.
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~--~~g~ 101 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG--KDVFVFSANLSDRKSIKQLAEVAER--EMEG 101 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHHHHH--HHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEeecCCHHHHHHHHHHHHH--HcCC
Confidence 46788888865442 344555679999999999887776655542 4789999999876532222221111 1246
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
.|.+|.|--
T Consensus 102 iD~lvnnAg 110 (266)
T 3grp_A 102 IDILVNNAG 110 (266)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 888888754
No 437
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=86.02 E-value=3.3 Score=37.02 Aligned_cols=79 Identities=15% Similarity=0.236 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 140 QEGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 140 ~~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.++++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+. .++.++.+|..+... +..+++ ..+
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~---~~~~~~---~~~ 83 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--DNYTIEVCNLANKEE---CSNLIS---KTS 83 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHH---HHHHHH---TCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--cCccEEEcCCCCHHH---HHHHHH---hcC
Confidence 357789988865442 344555679999999999988877766654 478889999877542 222232 224
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 84 ~id~li~~Ag 93 (249)
T 3f9i_A 84 NLDILVCNAG 93 (249)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888888754
No 438
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=86.01 E-value=2.7 Score=38.11 Aligned_cols=83 Identities=12% Similarity=0.146 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEE-eCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAI-EKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~v-E~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
++++||=.|++.|. ++..|++.|++|+.+ +.+++..+.+.+.+... .++.++.+|+.+...-+.+.+...+ ..
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDE--TF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 45678878865431 244555668998886 88888777666655443 4899999999876532222221111 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 81 g~id~lv~nA 90 (258)
T 3oid_A 81 GRLDVFVNNA 90 (258)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4678888875
No 439
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=85.95 E-value=2.6 Score=38.64 Aligned_cols=83 Identities=10% Similarity=0.104 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhcc--CCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~--~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+.+-.+.+.+.+.. ..++.++.+|+.+......+.+...+ ..
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK--EF 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 46789988975442 2445555689999999998766555444321 24789999999876432222221111 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 104 g~id~lv~nA 113 (277)
T 4fc7_A 104 GRIDILINCA 113 (277)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5688888774
No 440
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.91 E-value=2.6 Score=39.12 Aligned_cols=82 Identities=15% Similarity=0.183 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHH-HHHHHHHHhccC-CceEEEEccccccchhhhhhh-HHhhhcC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQH-MVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLS-LFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~-~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~-~~~~~~~ 214 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++ ..+.+.+..... .++.++.+|+.+...-..+.+ ..+ .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~---~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR---Q 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH---H
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH---H
Confidence 46789989965442 34455567999999998754 344444444333 489999999987643222222 222 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 123 ~g~iD~lvnnA 133 (291)
T 3ijr_A 123 LGSLNILVNNV 133 (291)
T ss_dssp HSSCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 24688888774
No 441
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.88 E-value=2.6 Score=38.42 Aligned_cols=82 Identities=12% Similarity=0.168 Sum_probs=51.6
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHh---cc-CCceEEEEccccccchhhhhhh-HHhh
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERF---AS-IDQLKVLQEDFVKCHIRSHMLS-LFER 211 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~---~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~ 211 (397)
.+++||=.|++ |.++ ..|++.|++|++++.+++..+.+.+.+ .. .+++.++.+|+.+....+...+ ..+
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~- 82 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG- 82 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH-
Confidence 35678877865 4444 445556899999999988776665554 22 2378899999987643221211 111
Q ss_pred hcCCCCcceEeecCC
Q 015990 212 RKSSSGFAKVVANIP 226 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|--
T Consensus 83 --~~g~id~lv~~Ag 95 (278)
T 1spx_A 83 --KFGKLDILVNNAG 95 (278)
T ss_dssp --HHSCCCEEEECCC
T ss_pred --HcCCCCEEEECCC
Confidence 1246788888753
No 442
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=85.83 E-value=2.4 Score=38.35 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=49.6
Q ss_pred CCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHH--HHHHHHHhcc-CCceEEEEccccccchhhhhhh-HHhhhc
Q 015990 142 GDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHM--VGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLS-LFERRK 213 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~--i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~~~ 213 (397)
+++||=.|++ |.++ ..|++.|++|+.++.+++. .+.+.+.+.. .+++.++.+|+.+...-+.+.+ ..+
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--- 77 (258)
T 3a28_C 2 SKVAMVTGGA-QGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAE--- 77 (258)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH---
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH---
Confidence 4577878865 4444 4455569999999998765 5544444433 2478899999987643221111 212
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|--
T Consensus 78 ~~g~iD~lv~nAg 90 (258)
T 3a28_C 78 KLGGFDVLVNNAG 90 (258)
T ss_dssp HHTCCCEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1246788888753
No 443
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=85.81 E-value=2.9 Score=39.49 Aligned_cols=97 Identities=19% Similarity=0.254 Sum_probs=59.1
Q ss_pred HhcCCCCCEEEEEcC--cccHHHHHHHH-cCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh
Q 015990 136 AAAVQEGDIVLEIGP--GTGSLTNVLLN-AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR 212 (397)
Q Consensus 136 ~~~~~~~~~VLEIG~--G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~ 212 (397)
.+.++++++||-.|+ |.|..+..+++ .|++|++++.+++..+.+++. .. . .++ |..+.+..+.+.+.
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g~--~-~~~--d~~~~~~~~~i~~~---- 209 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-GC--H-HTI--NYSTQDFAEVVREI---- 209 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC--S-EEE--ETTTSCHHHHHHHH----
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CC--C-EEE--ECCCHHHHHHHHHH----
Confidence 456788999999995 67777776666 488999999999888887663 21 1 122 32222221111111
Q ss_pred cCCCCcceEeecCCCcCcHHHHHHhccCCC
Q 015990 213 KSSSGFAKVVANIPFNISTDVIKQLLPMGD 242 (397)
Q Consensus 213 ~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~ 242 (397)
.....+|+++-|..-......+..+.++|.
T Consensus 210 ~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~ 239 (333)
T 1wly_A 210 TGGKGVDVVYDSIGKDTLQKSLDCLRPRGM 239 (333)
T ss_dssp HTTCCEEEEEECSCTTTHHHHHHTEEEEEE
T ss_pred hCCCCCeEEEECCcHHHHHHHHHhhccCCE
Confidence 122468999887765444455555555553
No 444
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=85.68 E-value=2.3 Score=39.02 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCc----ccH-HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcC
Q 015990 140 QEGDIVLEIGPG----TGS-LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 140 ~~~~~VLEIG~G----~G~-lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
-.+++||=.|.+ .|. ++..|++.|++|+.++.++ ..+.+++.....+++.++.+|+.+...-..+.+...+ .
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~ 100 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK--V 100 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH--H
Confidence 356789999933 554 4667777899999999987 2222222222335688999999876432222222211 2
Q ss_pred CCCcceEeecCCC
Q 015990 215 SSGFAKVVANIPF 227 (397)
Q Consensus 215 ~~~~d~Vv~NlPy 227 (397)
.+..|.+|.|--.
T Consensus 101 ~g~id~li~nAg~ 113 (280)
T 3nrc_A 101 WDGLDAIVHSIAF 113 (280)
T ss_dssp CSSCCEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 3578999988543
No 445
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=85.61 E-value=3.3 Score=38.05 Aligned_cols=83 Identities=17% Similarity=0.184 Sum_probs=51.9
Q ss_pred CCCEEEEEcCcccHHHHHHHH----cCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLTNVLLN----AGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La~----~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++ |.++..+++ .|.+|++++.+++-.+.+.+.+... .++.++.+|+.+...-+.+.+...+ ..
T Consensus 43 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~--~~ 119 (285)
T 2c07_A 43 ENKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT--EH 119 (285)
T ss_dssp SSCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH--HC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH--hc
Confidence 35688888854 556555544 5889999998887766655555432 4788999999876432211111111 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.||.|--
T Consensus 120 ~~id~li~~Ag 130 (285)
T 2c07_A 120 KNVDILVNNAG 130 (285)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46788887743
No 446
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.60 E-value=1.8 Score=38.29 Aligned_cols=70 Identities=20% Similarity=0.194 Sum_probs=46.0
Q ss_pred EEEEcCcccHHHHHHHH----cCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcce
Q 015990 145 VLEIGPGTGSLTNVLLN----AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAK 220 (397)
Q Consensus 145 VLEIG~G~G~lt~~La~----~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d~ 220 (397)
|+=+|+ |.++..+++ .|.+|+.+|.|++.++.+.+.. ++.++.+|+.+...-. . ......|.
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~-------~-a~i~~ad~ 68 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILR-------D-AEVSKNDV 68 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHH-------H-HTCCTTCE
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHH-------h-cCcccCCE
Confidence 555665 566555544 5889999999999888765542 4678999998753211 0 01245677
Q ss_pred EeecCCCc
Q 015990 221 VVANIPFN 228 (397)
Q Consensus 221 Vv~NlPy~ 228 (397)
|+...|-.
T Consensus 69 vi~~~~~d 76 (218)
T 3l4b_C 69 VVILTPRD 76 (218)
T ss_dssp EEECCSCH
T ss_pred EEEecCCc
Confidence 87777654
No 447
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.53 E-value=2.4 Score=40.75 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=38.4
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~ 181 (397)
.+.+.++++++||-+|+|. |.++..+++. |+ +|+++|.+++-.+.+++
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3456788999999999874 7777777774 77 79999999988888865
No 448
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=85.47 E-value=2 Score=41.41 Aligned_cols=49 Identities=24% Similarity=0.307 Sum_probs=39.5
Q ss_pred HHHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHH
Q 015990 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~ 181 (397)
+.+...++++++||=+|+|. |.++..+++. |+ +|+++|.+++-.+.+++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 34556788999999999874 7777777775 77 89999999998888765
No 449
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=85.47 E-value=1.9 Score=41.98 Aligned_cols=49 Identities=22% Similarity=0.300 Sum_probs=40.0
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~ 182 (397)
+..+.++++++||-+|+|. |.++..+++. |+ +|+++|.+++..+.+++.
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l 229 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ 229 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc
Confidence 3456788999999999875 7778888875 77 799999999999988753
No 450
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=85.40 E-value=2.6 Score=37.90 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcccHHHHH----HHHcCCcEEEEeC-CHHHHHHHHHHhcc-CCceEEEEccccccchhhhhh-hHHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEK-DQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHML-SLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~-d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~-~~~~~~~ 213 (397)
.+++||=.|++ |.++.. |++.|++|++++. +++..+.+.+.+.. .+++.++.+|+.+...-..+. .+.+
T Consensus 6 ~~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--- 81 (261)
T 1gee_A 6 EGKVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK--- 81 (261)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH---
Confidence 35678877854 555544 4556899999999 87666555444432 247889999988754221111 1111
Q ss_pred CCCCcceEeecC
Q 015990 214 SSSGFAKVVANI 225 (397)
Q Consensus 214 ~~~~~d~Vv~Nl 225 (397)
..+..|.||.|-
T Consensus 82 ~~g~id~li~~A 93 (261)
T 1gee_A 82 EFGKLDVMINNA 93 (261)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 124678888774
No 451
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=85.34 E-value=3.2 Score=37.95 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=51.3
Q ss_pred CCCEEEEEcCcccHHHHH----HHHcCCcEEEEeCCHHHHHHHHHHhccC---CceEEEEccccccchhhhhhh-HHhhh
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERFASI---DQLKVLQEDFVKCHIRSHMLS-LFERR 212 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~d~~~i~~a~~~~~~~---~~v~ii~gD~~~~~~~~~~~~-~~~~~ 212 (397)
.+++||=.|++ |.++.. |++.|++|++++.++...+.+.+.+... +++.++.+|+.+...-..+.+ +.+
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-- 107 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS-- 107 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH--
Confidence 45788888854 555544 4456899999999987766655544322 368889999987643221111 111
Q ss_pred cCCCCcceEeecCC
Q 015990 213 KSSSGFAKVVANIP 226 (397)
Q Consensus 213 ~~~~~~d~Vv~NlP 226 (397)
..+..|.||.|.-
T Consensus 108 -~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 108 -QHSGVDICINNAG 120 (279)
T ss_dssp -HHCCCSEEEECCC
T ss_pred -hCCCCCEEEECCC
Confidence 1246788887753
No 452
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=85.30 E-value=3.5 Score=36.59 Aligned_cols=82 Identities=17% Similarity=0.251 Sum_probs=50.9
Q ss_pred CCCEEEEEcCcccHHHHHH----HHcCCcEEEEeCCHHHHHHHHHHhcc--CCceEEEEccccccchhhhhh-hHHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHML-SLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~L----a~~~~~V~~vE~d~~~i~~a~~~~~~--~~~v~ii~gD~~~~~~~~~~~-~~~~~~~ 213 (397)
.+++||=.|+ +|.++..+ ++.|.+|++++.+++..+.+.+.+.. ..++.++.+|+.+...-.... ...+
T Consensus 6 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--- 81 (248)
T 2pnf_A 6 QGKVSLVTGS-TRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN--- 81 (248)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH---
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH---
Confidence 3567887775 45555444 45689999999998776655544432 247889999988754221111 1111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.||.|--
T Consensus 82 ~~~~~d~vi~~Ag 94 (248)
T 2pnf_A 82 LVDGIDILVNNAG 94 (248)
T ss_dssp HSSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1246788887753
No 453
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.21 E-value=2.4 Score=38.52 Aligned_cols=83 Identities=10% Similarity=0.085 Sum_probs=51.8
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEE-eCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAI-EKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~v-E~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++.|. ++..|++.|++|+.+ +.+++..+.+.+.+... +++.++.+|+.+....+.+.+...+ ..
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD--KF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH--Hh
Confidence 46788888876542 345556679999988 66666666555555433 4789999999876532222221111 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 85 g~id~lv~nA 94 (259)
T 3edm_A 85 GEIHGLVHVA 94 (259)
T ss_dssp CSEEEEEECC
T ss_pred CCCCEEEECC
Confidence 4678888774
No 454
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=85.08 E-value=2.7 Score=38.05 Aligned_cols=83 Identities=18% Similarity=0.200 Sum_probs=51.2
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++ |.++. .|++.|++|+.++.+++..+.+.+.+.. .+++.++.+|+.+...-..+.+...+ ...
T Consensus 4 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR-EQQ 81 (260)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH-HHT
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH-hcC
Confidence 35678877854 44544 4455689999999998776655554432 24788999999876432212111110 013
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 82 g~id~lvnnA 91 (260)
T 2qq5_A 82 GRLDVLVNNA 91 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCceEEEECC
Confidence 5678888876
No 455
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=84.99 E-value=2.1 Score=39.23 Aligned_cols=82 Identities=15% Similarity=0.086 Sum_probs=53.1
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++-.+.+.+.+ ..++.++.+|+.+...-..+.+...+ ..+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~ 85 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTID--TFGR 85 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHH--HcCC
Confidence 4678888887544 234556667999999999987766665555 24788899999876432222221111 1246
Q ss_pred cceEeecCC
Q 015990 218 FAKVVANIP 226 (397)
Q Consensus 218 ~d~Vv~NlP 226 (397)
.|.+|.|--
T Consensus 86 id~lv~nAg 94 (271)
T 3tzq_B 86 LDIVDNNAA 94 (271)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 888887743
No 456
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=84.92 E-value=2.9 Score=37.32 Aligned_cols=85 Identities=15% Similarity=0.262 Sum_probs=51.5
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC--CceEEEEccccccchhhhhhhHHhhh-cC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASI--DQLKVLQEDFVKCHIRSHMLSLFERR-KS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~--~~v~ii~gD~~~~~~~~~~~~~~~~~-~~ 214 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++-.+.+.+.+... +++.++..|....+..+ ...+++.. ..
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~-~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQ-YRELAARVEHE 91 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHH-HHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHH-HHHHHHHHHHh
Confidence 4678888887543 234455567999999999998887776665433 36778888873322211 11111110 01
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 92 ~g~id~lv~nAg 103 (247)
T 3i1j_A 92 FGRLDGLLHNAS 103 (247)
T ss_dssp HSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 246888888754
No 457
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=84.91 E-value=2.7 Score=37.78 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=49.2
Q ss_pred CCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 142 GDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 142 ~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
+++||=.|.+.| .++..|++.|++|+.++.+++..+.+.+. .+++.++.+|+.+...-..+.+...+ ..+..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~i 76 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---RPNLFYFHGDVADPLTLKKFVEYAME--KLQRI 76 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHHH--HHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cccCCeEEeeCCCHHHHHHHHHHHHH--HcCCC
Confidence 356787886544 23445556799999999998766554433 34678999999876432222221111 12468
Q ss_pred ceEeecC
Q 015990 219 AKVVANI 225 (397)
Q Consensus 219 d~Vv~Nl 225 (397)
|.+|.|-
T Consensus 77 d~lv~nA 83 (247)
T 3dii_A 77 DVLVNNA 83 (247)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 8888775
No 458
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=84.90 E-value=1.6 Score=40.33 Aligned_cols=84 Identities=17% Similarity=0.229 Sum_probs=51.6
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccC-C-ceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASI-D-QLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~-~-~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+++..+.+.+.+... + .+.++.+|+.+...-+.+.+...+ ..
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA--EF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 46788888865432 34455566999999999998777665554321 2 458999999876532222221111 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 110 g~iD~lvnnAG 120 (281)
T 4dry_A 110 ARLDLLVNNAG 120 (281)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 56888887753
No 459
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.88 E-value=5.4 Score=33.86 Aligned_cols=74 Identities=23% Similarity=0.240 Sum_probs=46.5
Q ss_pred CCEEEEEcCcc-cHH-HHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 142 GDIVLEIGPGT-GSL-TNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 142 ~~~VLEIG~G~-G~l-t~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
+++|+=+|+|. |.. +..|.+. |.+|+++|.|++.++.+++. ++.++.+|..+.... .+.......
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-----g~~~~~gd~~~~~~l-------~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-----GRNVISGDATDPDFW-------ERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-----TCCEEECCTTCHHHH-------HTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-----CCCEEEcCCCCHHHH-------HhccCCCCC
Confidence 56788888763 322 3344456 88999999999888776642 356788887654211 100012457
Q ss_pred ceEeecCCC
Q 015990 219 AKVVANIPF 227 (397)
Q Consensus 219 d~Vv~NlPy 227 (397)
|.|+...|-
T Consensus 107 d~vi~~~~~ 115 (183)
T 3c85_A 107 KLVLLAMPH 115 (183)
T ss_dssp CEEEECCSS
T ss_pred CEEEEeCCC
Confidence 888776663
No 460
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=84.74 E-value=2.2 Score=40.75 Aligned_cols=49 Identities=29% Similarity=0.415 Sum_probs=39.7
Q ss_pred HHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CCcEEEEeCCHHHHHHHHHH
Q 015990 134 AAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 134 ~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~ 182 (397)
+..+.++++++||-+|+|. |.++..+++. |++|++++.+++..+.+++.
T Consensus 161 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 211 (352)
T 1e3j_A 161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC 211 (352)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh
Confidence 3566788999999999874 7777777764 78899999999998888753
No 461
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.70 E-value=1.4 Score=44.24 Aligned_cols=52 Identities=13% Similarity=0.331 Sum_probs=39.7
Q ss_pred CEEEEEcCcccHHHHHHHH----cCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccc
Q 015990 143 DIVLEIGPGTGSLTNVLLN----AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCH 200 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~----~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~ 200 (397)
.+|+=+||| ..+..+++ .+..|+.||.|++.++.+.+.+ ++.+++||+.+..
T Consensus 4 M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~ 59 (461)
T 4g65_A 4 MKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----DLRVVNGHASHPD 59 (461)
T ss_dssp EEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----SCEEEESCTTCHH
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHH
Confidence 356666765 55555554 4778999999999999888775 4788999998875
No 462
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=84.67 E-value=3.8 Score=37.46 Aligned_cols=79 Identities=20% Similarity=0.288 Sum_probs=50.2
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh-HHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS-LFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+ +++.++.+|+.+...-+.+.+ ..+ ..+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~---~~g 81 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDDVKTLVSETIR---RFG 81 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTEEEEECCTTSHHHHHHHHHHHHH---HHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCCeEEEcCCCCHHHHHHHHHHHHH---HcC
Confidence 4678888886543 223445556999999999987766555443 358889999887643221211 112 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 82 ~iD~lv~nA 90 (270)
T 1yde_A 82 RLDCVVNNA 90 (270)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 678888774
No 463
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=84.65 E-value=4.2 Score=37.42 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=53.1
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeC-CHHHHHHHHHHhcc--CCceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEK-DQHMVGLVRERFAS--IDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~-d~~~i~~a~~~~~~--~~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|++.|. ++..|++.|++|+.++. +++..+.+.+.+.. .+++.++.+|+.+...-..+.+...+ .
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 101 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD--R 101 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH--H
Confidence 45788988965442 34455567999999998 66666665555543 24789999999876432222221111 2
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 102 ~g~iD~lv~nAg 113 (281)
T 3v2h_A 102 FGGADILVNNAG 113 (281)
T ss_dssp TSSCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 356889887743
No 464
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=84.60 E-value=3 Score=38.01 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEeCCHHHHHHHHHHh-cc-CCceEEEEccccccchhhhhhh-HHhhhc
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIEKDQHMVGLVRERF-AS-IDQLKVLQEDFVKCHIRSHMLS-LFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE~d~~~i~~a~~~~-~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~~~ 213 (397)
.+++||=.|++ |.++ ..|++.|++|++++.+++..+.+.+.+ .. ..++.++.+|+.+...-..+.+ ..+
T Consensus 20 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--- 95 (267)
T 1vl8_A 20 RGRVALVTGGS-RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE--- 95 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH---
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH---
Confidence 45788888865 4444 445556899999999987666554443 11 2478889999887542211111 111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.+|.|--
T Consensus 96 ~~g~iD~lvnnAg 108 (267)
T 1vl8_A 96 KFGKLDTVVNAAG 108 (267)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1246888887753
No 465
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.56 E-value=5.8 Score=37.52 Aligned_cols=56 Identities=16% Similarity=0.162 Sum_probs=44.7
Q ss_pred CCEEEEEcCcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhc-----cCCceEEEEccccc
Q 015990 142 GDIVLEIGPGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFA-----SIDQLKVLQEDFVK 198 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~-----~~~~v~ii~gD~~~ 198 (397)
...|+++|||.=+....+... +.+++=|| .|..++..++.+. ..++.+++.+|+.+
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 357999999998887777632 46788888 6999998888886 24588999999987
No 466
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=84.52 E-value=4.1 Score=36.09 Aligned_cols=81 Identities=9% Similarity=0.062 Sum_probs=50.5
Q ss_pred CCEEEEEcCcccHHHHHH----HHcCC-------cEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHH
Q 015990 142 GDIVLEIGPGTGSLTNVL----LNAGA-------TVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 142 ~~~VLEIG~G~G~lt~~L----a~~~~-------~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
+++||=.|+ +|.++..+ ++.|. +|++++.+++..+.+.+.+... .++.++.+|+.+...-....+..
T Consensus 2 ~k~vlITGa-sggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 2 KHILLITGA-GKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 346777775 45555544 44687 8999999988777666555432 47899999998754222111111
Q ss_pred hhhcCCCCcceEeecC
Q 015990 210 ERRKSSSGFAKVVANI 225 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~Nl 225 (397)
.+ ..+..|.||.|-
T Consensus 81 ~~--~~g~id~li~~A 94 (244)
T 2bd0_A 81 VE--RYGHIDCLVNNA 94 (244)
T ss_dssp HH--HTSCCSEEEECC
T ss_pred HH--hCCCCCEEEEcC
Confidence 11 124688888774
No 467
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=84.50 E-value=2.6 Score=40.21 Aligned_cols=97 Identities=20% Similarity=0.175 Sum_probs=58.9
Q ss_pred HHhcCCCCCEEEEEc--CcccHHHHHHHHc-CCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhh
Q 015990 135 AAAAVQEGDIVLEIG--PGTGSLTNVLLNA-GATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG--~G~G~lt~~La~~-~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
+.+.++++++||=+| .|.|..+..+++. |++|++++.+++-.+.+++. +--.++.. .+.++.+.+ .+
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~~~~~--~~~~~~~~~----~~ 230 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAKRGINY--RSEDFAAVI----KA 230 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCSEEEET--TTSCHHHHH----HH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCCEEEeC--CchHHHHHH----HH
Confidence 445778999999995 3467777777764 88999999999998888764 21122222 222221111 11
Q ss_pred hcCCCCcceEeecCCCcCcHHHHHHhccCCC
Q 015990 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMGD 242 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~ 242 (397)
.. ...+|+|+-+..-......+..+.++|.
T Consensus 231 ~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~ 260 (353)
T 4dup_A 231 ET-GQGVDIILDMIGAAYFERNIASLAKDGC 260 (353)
T ss_dssp HH-SSCEEEEEESCCGGGHHHHHHTEEEEEE
T ss_pred Hh-CCCceEEEECCCHHHHHHHHHHhccCCE
Confidence 11 3568888877664444445555555543
No 468
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=84.48 E-value=1.8 Score=39.92 Aligned_cols=82 Identities=10% Similarity=0.089 Sum_probs=54.0
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhh-hhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRS-HMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~-~~~~~~~~~~~~~ 216 (397)
+++.+|=-|.+.|. ++..|++.|++|+.++.+++..+.+++..+..+++..+.+|+.+..... .+....+ ..+
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~---~~G 82 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA---TFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH---HHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH---HhC
Confidence 56788888877664 3556677899999999876655544444334468899999998764322 2222222 226
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 83 ~iDiLVNnA 91 (258)
T 4gkb_A 83 RLDGLVNNA 91 (258)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789988884
No 469
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=84.40 E-value=3 Score=37.54 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=50.7
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh-HHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS-LFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~~ 215 (397)
.+++||=.|++ |.++. .|++.|++|+.++.+++..+.+.+.+ .+++.++.+|+.+...-+.+.+ ..+ ..
T Consensus 5 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~---~~ 78 (253)
T 1hxh_A 5 QGKVALVTGGA-SGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQR---RL 78 (253)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHH---HH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHH---Hc
Confidence 35678877754 44444 44556899999999987776655554 2478899999887643221111 111 12
Q ss_pred CCcceEeecCC
Q 015990 216 SGFAKVVANIP 226 (397)
Q Consensus 216 ~~~d~Vv~NlP 226 (397)
+..|.+|.|--
T Consensus 79 g~id~lv~~Ag 89 (253)
T 1hxh_A 79 GTLNVLVNNAG 89 (253)
T ss_dssp CSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46788887753
No 470
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=84.40 E-value=3.2 Score=37.53 Aligned_cols=79 Identities=20% Similarity=0.200 Sum_probs=49.6
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhh-hHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHML-SLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~-~~~~~~~~~ 215 (397)
.+++||=.|++ |.++. .|++.|++|++++.+++..+.+.+.+. .++.++.+|+.+...-+... ...+ ..
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~---~~ 84 (263)
T 3ak4_A 11 SGRKAIVTGGS-KGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--NGGFAVEVDVTKRASVDAAMQKAID---AL 84 (263)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT--TCCEEEECCTTCHHHHHHHHHHHHH---HH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--cCCeEEEEeCCCHHHHHHHHHHHHH---Hc
Confidence 46788888864 44444 445568999999999876665544432 26788899988754221111 1111 12
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.+|.|-
T Consensus 85 g~iD~lv~~A 94 (263)
T 3ak4_A 85 GGFDLLCANA 94 (263)
T ss_dssp TCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4678888774
No 471
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.30 E-value=1.7 Score=42.05 Aligned_cols=49 Identities=22% Similarity=0.211 Sum_probs=39.7
Q ss_pred HHHHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CCcEEEEeCCHHHHHHHHH
Q 015990 133 LAAAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GATVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 133 i~~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~~V~~vE~d~~~i~~a~~ 181 (397)
.+..+.++++++||-+|+|. |.++..+++. |++|++++.+++..+.+++
T Consensus 186 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34445788999999999874 7777777774 8899999999988888876
No 472
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=84.23 E-value=3.3 Score=37.37 Aligned_cols=81 Identities=16% Similarity=0.120 Sum_probs=50.3
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh-HHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS-LFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+ .+++.++.+|+.+...-..+.+ ..+ ..+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~g 78 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYARE---EFG 78 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHH---HHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHH---HcC
Confidence 3567888886433 223445567999999999987666554444 2368889999876542211111 111 124
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 79 ~iD~lv~nAg 88 (254)
T 1hdc_A 79 SVDGLVNNAG 88 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888887753
No 473
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=84.20 E-value=5.4 Score=32.89 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=46.5
Q ss_pred CEEEEEcCcccHHHHHHH----HcCCcEEEEeCC-HHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 143 DIVLEIGPGTGSLTNVLL----NAGATVLAIEKD-QHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La----~~~~~V~~vE~d-~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.+|+=+|+ |.++..++ +.|.+|+.+|.+ ++.++.+.+... .++.++.||+.+...-. +. ....
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--~~~~~i~gd~~~~~~l~------~a--~i~~ 71 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLK------KA--GIDR 71 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHH------HH--TTTT
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--CCCeEEEcCCCCHHHHH------Hc--Chhh
Confidence 46777776 56655554 358899999998 565555554432 35889999987653211 00 1245
Q ss_pred cceEeecCCCc
Q 015990 218 FAKVVANIPFN 228 (397)
Q Consensus 218 ~d~Vv~NlPy~ 228 (397)
.|.|+.-.+..
T Consensus 72 ad~vi~~~~~d 82 (153)
T 1id1_A 72 CRAILALSDND 82 (153)
T ss_dssp CSEEEECSSCH
T ss_pred CCEEEEecCCh
Confidence 77888776643
No 474
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=84.19 E-value=4.2 Score=37.57 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=41.6
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEe-CCHHHHHHHHHHhc-c-CCceEEEEccccccc
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIE-KDQHMVGLVRERFA-S-IDQLKVLQEDFVKCH 200 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE-~d~~~i~~a~~~~~-~-~~~v~ii~gD~~~~~ 200 (397)
.+++||=.|++.| ++ ..|++.|++|+.++ .+++..+.+.+.+. . ..++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcc
Confidence 3567887786544 44 44555699999999 99877766655543 2 247899999998765
No 475
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=84.06 E-value=1.7 Score=40.96 Aligned_cols=84 Identities=14% Similarity=0.194 Sum_probs=51.5
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCC----------HHHHHHHHHHhcc-CCceEEEEccccccchhhhhh
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKD----------QHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHML 206 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d----------~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~ 206 (397)
.+++||=.|++.| .++..|++.|++|+.++.+ .+..+.+.+.+.. .+++.++.+|+.+......+.
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 5678888887644 2345556679999999987 4445444444433 347889999998764322222
Q ss_pred hHHhhhcCCCCcceEeecCC
Q 015990 207 SLFERRKSSSGFAKVVANIP 226 (397)
Q Consensus 207 ~~~~~~~~~~~~d~Vv~NlP 226 (397)
+...+ ..+..|.+|.|--
T Consensus 106 ~~~~~--~~g~iD~lv~nAg 123 (322)
T 3qlj_A 106 QTAVE--TFGGLDVLVNNAG 123 (322)
T ss_dssp HHHHH--HHSCCCEEECCCC
T ss_pred HHHHH--HcCCCCEEEECCC
Confidence 21111 1246888887743
No 476
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=83.97 E-value=3.1 Score=37.39 Aligned_cols=82 Identities=12% Similarity=0.092 Sum_probs=50.8
Q ss_pred CCCEEEEEcCcccHHHHH----HHH-cCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLN-AGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~-~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
++++||=.|+ +|.++.. |++ .|++|+.++.+++-.+.+.+.+... .++.++.+|+.+...-..+.+.+.+ .
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~ 79 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK--E 79 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH--h
Confidence 4567887774 4555544 455 6889999999987666655555332 4789999998875432212211111 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.||.|-
T Consensus 80 ~g~id~li~~A 90 (276)
T 1wma_A 80 YGGLDVLVNNA 90 (276)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 24678888764
No 477
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=83.95 E-value=3.5 Score=37.50 Aligned_cols=81 Identities=11% Similarity=0.112 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeC-CHHHHHHHHHHhcc--CCceEEEEcccccc----chhhhhhh-H
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEK-DQHMVGLVRERFAS--IDQLKVLQEDFVKC----HIRSHMLS-L 208 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~-d~~~i~~a~~~~~~--~~~v~ii~gD~~~~----~~~~~~~~-~ 208 (397)
.+++||=.|++ |.++. .|++.|++|+.++. +++..+.+.+.+.. .+++.++.+|+.+. ..-..+.+ .
T Consensus 10 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 10 ECPAAVITGGA-RRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp -CCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 35678877755 44544 44556899999999 88766655554432 24789999999876 32211111 1
Q ss_pred HhhhcCCCCcceEeecC
Q 015990 209 FERRKSSSGFAKVVANI 225 (397)
Q Consensus 209 ~~~~~~~~~~d~Vv~Nl 225 (397)
.+ ..+..|.+|.|-
T Consensus 89 ~~---~~g~id~lv~nA 102 (276)
T 1mxh_A 89 FR---AFGRCDVLVNNA 102 (276)
T ss_dssp HH---HHSCCCEEEECC
T ss_pred HH---hcCCCCEEEECC
Confidence 11 124678888774
No 478
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=83.93 E-value=3.9 Score=40.33 Aligned_cols=73 Identities=19% Similarity=0.332 Sum_probs=48.5
Q ss_pred CCEEEEEcCcc-cHH-HHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCcc
Q 015990 142 GDIVLEIGPGT-GSL-TNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFA 219 (397)
Q Consensus 142 ~~~VLEIG~G~-G~l-t~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~d 219 (397)
+.+|+=+|+|. |.. +..|.+.|..|++||.|++.++.+++. ++.++.||+.+.+.-. . ......+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-----g~~vi~GDat~~~~L~-------~-agi~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-----GMKVFYGDATRMDLLE-------S-AGAAKAE 70 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-----TCCCEESCTTCHHHHH-------H-TTTTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-----CCeEEEcCCCCHHHHH-------h-cCCCccC
Confidence 45688888764 222 233334588999999999999988752 4678999998864321 1 0224567
Q ss_pred eEeecCCC
Q 015990 220 KVVANIPF 227 (397)
Q Consensus 220 ~Vv~NlPy 227 (397)
.||.-++-
T Consensus 71 ~viv~~~~ 78 (413)
T 3l9w_A 71 VLINAIDD 78 (413)
T ss_dssp EEEECCSS
T ss_pred EEEECCCC
Confidence 77776664
No 479
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=83.72 E-value=3.6 Score=38.15 Aligned_cols=82 Identities=13% Similarity=0.192 Sum_probs=52.6
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCC---cEEEEeCCHHHHHHHHHHhcc---CCceEEEEccccccchhhhhhhHHh
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGA---TVLAIEKDQHMVGLVRERFAS---IDQLKVLQEDFVKCHIRSHMLSLFE 210 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~---~V~~vE~d~~~i~~a~~~~~~---~~~v~ii~gD~~~~~~~~~~~~~~~ 210 (397)
.+++||=.|++.| ++. .|++.|+ +|+.++.+++..+.+.+.+.. ..++.++.+|+.+...-+.+.+...
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3678998996544 444 4445566 999999999887776665532 2478999999987653222211111
Q ss_pred hhcCCCCcceEeecC
Q 015990 211 RRKSSSGFAKVVANI 225 (397)
Q Consensus 211 ~~~~~~~~d~Vv~Nl 225 (397)
...+..|.+|.|-
T Consensus 111 --~~~g~iD~lVnnA 123 (287)
T 3rku_A 111 --QEFKDIDILVNNA 123 (287)
T ss_dssp --GGGCSCCEEEECC
T ss_pred --HhcCCCCEEEECC
Confidence 1224688888774
No 480
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.54 E-value=2.6 Score=40.23 Aligned_cols=98 Identities=20% Similarity=0.223 Sum_probs=58.0
Q ss_pred HHhcCCCCCEEEEEcC--cccHHHHHHHH-cCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhh
Q 015990 135 AAAAVQEGDIVLEIGP--GTGSLTNVLLN-AGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFER 211 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG~--G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~ 211 (397)
+.+.++++++||-.|+ |.|..+..+++ .|++|++++.+++..+.+++. .. . .++ |..+.+..+.+.+.
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-g~--~-~~~--~~~~~~~~~~~~~~--- 226 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL-GA--A-AGF--NYKKEDFSEATLKF--- 226 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TC--S-EEE--ETTTSCHHHHHHHH---
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CC--c-EEE--ecCChHHHHHHHHH---
Confidence 3456788999999984 56777766666 488999999999988888543 21 1 122 22222221111111
Q ss_pred hcCCCCcceEeecCCCcCcHHHHHHhccCCC
Q 015990 212 RKSSSGFAKVVANIPFNISTDVIKQLLPMGD 242 (397)
Q Consensus 212 ~~~~~~~d~Vv~NlPy~i~s~il~~L~~~g~ 242 (397)
.....+|+++-|..-......+..+.++|.
T Consensus 227 -~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~ 256 (354)
T 2j8z_A 227 -TKGAGVNLILDCIGGSYWEKNVNCLALDGR 256 (354)
T ss_dssp -TTTSCEEEEEESSCGGGHHHHHHHEEEEEE
T ss_pred -hcCCCceEEEECCCchHHHHHHHhccCCCE
Confidence 122468898877654434445555555553
No 481
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=83.48 E-value=4.8 Score=36.44 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=50.6
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhh-HHhhhcCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLS-LFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~-~~~~~~~~~ 216 (397)
.+++||=.|++.| .++..|++.|++|++++.+++..+.+.+.+. .++.++.+|+.+...-....+ ..+ ..+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~---~~g 80 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAVT---AFG 80 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHHH---HHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--cCceEEEecCCCHHHHHHHHHHHHH---HcC
Confidence 4568888886543 2234455679999999999877666555443 258889999887542221111 111 124
Q ss_pred CcceEeecCC
Q 015990 217 GFAKVVANIP 226 (397)
Q Consensus 217 ~~d~Vv~NlP 226 (397)
..|.+|.|--
T Consensus 81 ~iD~lv~~Ag 90 (260)
T 1nff_A 81 GLHVLVNNAG 90 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888887753
No 482
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=83.45 E-value=3.4 Score=37.61 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcccHHH----HHHHHcCCcEEEEe-CCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTGSLT----NVLLNAGATVLAIE-KDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt----~~La~~~~~V~~vE-~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|++ |.++ ..|++.|++|+.++ .+.+..+........ ..++.++.+|+.+....+.+.+...+ .
T Consensus 24 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~ 100 (269)
T 3gk3_A 24 AKRVAFVTGGM-GGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA--D 100 (269)
T ss_dssp CCCEEEETTTT-SHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred cCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH--H
Confidence 45678877865 4444 44555688999998 666655554444433 34899999999876532222221111 1
Q ss_pred CCCcceEeecC
Q 015990 215 SSGFAKVVANI 225 (397)
Q Consensus 215 ~~~~d~Vv~Nl 225 (397)
.+..|.+|.|-
T Consensus 101 ~g~id~li~nA 111 (269)
T 3gk3_A 101 FGKVDVLINNA 111 (269)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 24688888774
No 483
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=83.20 E-value=2.1 Score=38.21 Aligned_cols=82 Identities=13% Similarity=0.164 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcccHHHHHH----HHcCCcEEEEeCC-HHHHHHHHHHhcc-CCceEEEEccccccchhhhhhh-HHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTNVL----LNAGATVLAIEKD-QHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLS-LFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~L----a~~~~~V~~vE~d-~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~~~ 213 (397)
.+++||=.|+ +|.++..+ ++.|.+|++++.+ ++-.+.+.+.+.. ..++.++.+|+.+...-....+ ..+
T Consensus 6 ~~k~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--- 81 (258)
T 3afn_B 6 KGKRVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA--- 81 (258)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH---
Confidence 3567887775 45555544 4568899999988 5545444443332 2478999999987642221111 111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.||.|--
T Consensus 82 ~~g~id~vi~~Ag 94 (258)
T 3afn_B 82 KFGGIDVLINNAG 94 (258)
T ss_dssp HHSSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1246788887753
No 484
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=83.09 E-value=3 Score=38.17 Aligned_cols=83 Identities=17% Similarity=0.129 Sum_probs=49.9
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHH-------HHHHHHHh-ccCCceEEEEccccccchhhhhhhHH
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHM-------VGLVRERF-ASIDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~-------i~~a~~~~-~~~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
.+++||=.|++.| .++..|++.|++|+.++.+.+. ++.+.+.+ ...+++.++.+|+.+..--..+.+..
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 4678888887655 2345566679999999987541 22222222 22358899999998765322222211
Q ss_pred hhhcCCCCcceEeecC
Q 015990 210 ERRKSSSGFAKVVANI 225 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~Nl 225 (397)
.+ ..+..|.+|.|-
T Consensus 85 ~~--~~g~iD~lvnnA 98 (274)
T 3e03_A 85 VD--TFGGIDILVNNA 98 (274)
T ss_dssp HH--HHSCCCEEEECC
T ss_pred HH--HcCCCCEEEECC
Confidence 11 124688888875
No 485
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=82.96 E-value=2.8 Score=38.72 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=50.3
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHH-------HHHHHHHHh-ccCCceEEEEccccccchhhhhhhHH
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQH-------MVGLVRERF-ASIDQLKVLQEDFVKCHIRSHMLSLF 209 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~-------~i~~a~~~~-~~~~~v~ii~gD~~~~~~~~~~~~~~ 209 (397)
.+++||=.|++.| .++..|++.|++|+.++.+++ .++.+.+.+ ...+++.++.+|+.+...-..+.+..
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4678888887655 234555566899999998865 222222222 22358999999998765322222211
Q ss_pred hhhcCCCCcceEeecCC
Q 015990 210 ERRKSSSGFAKVVANIP 226 (397)
Q Consensus 210 ~~~~~~~~~d~Vv~NlP 226 (397)
.+ ..+..|.+|.|--
T Consensus 88 ~~--~~g~id~lvnnAg 102 (285)
T 3sc4_A 88 VE--QFGGIDICVNNAS 102 (285)
T ss_dssp HH--HHSCCSEEEECCC
T ss_pred HH--HcCCCCEEEECCC
Confidence 11 1246888888743
No 486
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=82.90 E-value=3.7 Score=37.03 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHH----HHHcCCcEEEEeCCHHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcCC
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKSS 215 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~d~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~~ 215 (397)
.+++||=.|+ +|.++.. |++.|++|++++.+++-.+.+.+.+... .++.++.+|+.+......+.+...+ ...
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS-MFG 90 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH-HHT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH-HhC
Confidence 3567887775 4445544 4456899999999987666555544332 3788999998775422111111111 011
Q ss_pred CCcceEeecC
Q 015990 216 SGFAKVVANI 225 (397)
Q Consensus 216 ~~~d~Vv~Nl 225 (397)
+..|.||.|-
T Consensus 91 ~~id~li~~A 100 (266)
T 1xq1_A 91 GKLDILINNL 100 (266)
T ss_dssp TCCSEEEEEC
T ss_pred CCCcEEEECC
Confidence 4678888774
No 487
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=82.73 E-value=3.4 Score=37.16 Aligned_cols=80 Identities=13% Similarity=0.083 Sum_probs=50.0
Q ss_pred CCCEEEEEcCcccHHHHH----HHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCC
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSS 216 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~ 216 (397)
.+++||=.|++ |.++.. |++.|++|++++.+++-.+.+.+.+ ..++.++.+|+.+...-+.+.+...+ ..+
T Consensus 11 ~~k~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~--~~g 85 (265)
T 2o23_A 11 KGLVAVITGGA-SGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKG--KFG 85 (265)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHH--HHS
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHH--HCC
Confidence 46788888865 445544 4456899999999876555544444 24789999999875422211111111 124
Q ss_pred CcceEeecC
Q 015990 217 GFAKVVANI 225 (397)
Q Consensus 217 ~~d~Vv~Nl 225 (397)
..|.+|.|-
T Consensus 86 ~id~li~~A 94 (265)
T 2o23_A 86 RVDVAVNCA 94 (265)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 688888774
No 488
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=82.69 E-value=3.8 Score=38.93 Aligned_cols=47 Identities=30% Similarity=0.400 Sum_probs=37.1
Q ss_pred HHhcCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHH
Q 015990 135 AAAAVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~ 182 (397)
..+.+ ++++||-+|+|. |.++..+++. |+ +|++++.+++-.+.+++.
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~ 211 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV 211 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 44567 899999999863 6667777764 77 999999999988888753
No 489
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=82.46 E-value=2 Score=40.55 Aligned_cols=47 Identities=17% Similarity=0.367 Sum_probs=37.8
Q ss_pred HHhcCCCCCEEEEEcC--cccHHHHHHHH-cCCcEEEEeCCHHHHHHHHH
Q 015990 135 AAAAVQEGDIVLEIGP--GTGSLTNVLLN-AGATVLAIEKDQHMVGLVRE 181 (397)
Q Consensus 135 ~~~~~~~~~~VLEIG~--G~G~lt~~La~-~~~~V~~vE~d~~~i~~a~~ 181 (397)
+...++++++||-.|+ |.|..+..+++ .|++|++++.+++..+.+++
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 188 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ 188 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 4557889999999998 67777766666 48899999999988888743
No 490
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=82.45 E-value=2 Score=38.90 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=45.4
Q ss_pred CCCEEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCC
Q 015990 141 EGDIVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSG 217 (397)
Q Consensus 141 ~~~~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~ 217 (397)
.++++|=.|++.| .++..|++.|++|+.++.+++..+.+.+.+ ..++.++.+|+.+......+.+...+ ..+.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~ 81 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--GAAVRFRNADVTNEADATAALAFAKQ--EFGH 81 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHH--HHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHH--HcCC
Confidence 4678888887654 234555667999999999877665544443 24788999999876432222221111 1246
Q ss_pred cceEeecC
Q 015990 218 FAKVVANI 225 (397)
Q Consensus 218 ~d~Vv~Nl 225 (397)
.|.+|.|-
T Consensus 82 id~lv~nA 89 (257)
T 3tpc_A 82 VHGLVNCA 89 (257)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 88888774
No 491
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=82.32 E-value=3.1 Score=38.58 Aligned_cols=84 Identities=12% Similarity=0.078 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccH---HHHHHHHcCCcEEEEeCC--HHHHHHHHHHhccC-CceEEEEccccccchhhhhhhHHhhhcC
Q 015990 141 EGDIVLEIGPGTGS---LTNVLLNAGATVLAIEKD--QHMVGLVRERFASI-DQLKVLQEDFVKCHIRSHMLSLFERRKS 214 (397)
Q Consensus 141 ~~~~VLEIG~G~G~---lt~~La~~~~~V~~vE~d--~~~i~~a~~~~~~~-~~v~ii~gD~~~~~~~~~~~~~~~~~~~ 214 (397)
.+++||=.|++.|. ++..|++.|++|+.++.+ ++..+.+.+..... .++.++.+|+.+....+.+.+...+ .
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE--A 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH--H
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH--H
Confidence 46789999965442 244555679999999886 33444444443332 4789999999876432222221111 1
Q ss_pred CCCcceEeecCC
Q 015990 215 SSGFAKVVANIP 226 (397)
Q Consensus 215 ~~~~d~Vv~NlP 226 (397)
.+..|.+|.|--
T Consensus 126 ~g~iD~lv~nAg 137 (294)
T 3r3s_A 126 LGGLDILALVAG 137 (294)
T ss_dssp HTCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 246788887743
No 492
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=82.31 E-value=4.9 Score=36.16 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=47.8
Q ss_pred EEEEEcCccc---HHHHHHHHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhh-cCCCCcc
Q 015990 144 IVLEIGPGTG---SLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERR-KSSSGFA 219 (397)
Q Consensus 144 ~VLEIG~G~G---~lt~~La~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~-~~~~~~d 219 (397)
+||=.|++.| .++..|++.|++|+.++.+++..+.+.+.+. +++.++.+|+.+...-+ .+++.. ...+..|
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~---~~~~~~~~~~g~iD 76 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIE---EMLASLPAEWCNID 76 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHH---HHHHTSCTTTCCCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHH---HHHHHHHHhCCCCC
Confidence 3555565333 2345566679999999999887776665553 47889999988754221 222211 1224688
Q ss_pred eEeecC
Q 015990 220 KVVANI 225 (397)
Q Consensus 220 ~Vv~Nl 225 (397)
.+|.|-
T Consensus 77 ~lvnnA 82 (248)
T 3asu_A 77 ILVNNA 82 (248)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 888774
No 493
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=82.18 E-value=3.8 Score=36.92 Aligned_cols=82 Identities=18% Similarity=0.119 Sum_probs=50.3
Q ss_pred CCCEEEEEcCcccHHHHH----HHHcCCcEEEEeC-CHHHHHHHHHHhcc-CCceEEEEccccccchh-hhhhhHHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTNV----LLNAGATVLAIEK-DQHMVGLVRERFAS-IDQLKVLQEDFVKCHIR-SHMLSLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~----La~~~~~V~~vE~-d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~-~~~~~~~~~~~ 213 (397)
.+++||=.|+ +|.++.. |++.|++|++++. +++..+.+.+.+.. ..++.++.+|+.+...- ..+.+...
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--- 95 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS--- 95 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH---
Confidence 4568888885 4555544 4456889999998 77766555444433 24788999999875422 11111111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.||.|..
T Consensus 96 ~~~~~d~vi~~Ag 108 (274)
T 1ja9_A 96 HFGGLDFVMSNSG 108 (274)
T ss_dssp HHSCEEEEECCCC
T ss_pred HcCCCCEEEECCC
Confidence 1246788887753
No 494
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.14 E-value=6.4 Score=38.28 Aligned_cols=45 Identities=29% Similarity=0.439 Sum_probs=36.8
Q ss_pred cCCCCCEEEEEcCcc-cHHHHHHHHc-CC-cEEEEeCCHHHHHHHHHH
Q 015990 138 AVQEGDIVLEIGPGT-GSLTNVLLNA-GA-TVLAIEKDQHMVGLVRER 182 (397)
Q Consensus 138 ~~~~~~~VLEIG~G~-G~lt~~La~~-~~-~V~~vE~d~~~i~~a~~~ 182 (397)
.++++++||=+|+|. |.++..+++. |+ +|+++|.+++-.+.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 578899999999864 6667777764 77 899999999999988764
No 495
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=82.03 E-value=6.4 Score=31.25 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=45.0
Q ss_pred CEEEEEcCcccHHHHHH----HHcCCcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhcCCCCc
Q 015990 143 DIVLEIGPGTGSLTNVL----LNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGF 218 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~L----a~~~~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~~~~~~ 218 (397)
.+|+=+|+ |.++..+ .+.+.+|+.+|.+++.++.+++.. ++.++.+|..+...- ... .....
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l------~~~--~~~~~ 70 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTL------EDA--GIEDA 70 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHH------HHT--TTTTC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHH------HHc--CcccC
Confidence 57888887 4554444 445889999999998877665432 356778887543211 000 12357
Q ss_pred ceEeecCCCc
Q 015990 219 AKVVANIPFN 228 (397)
Q Consensus 219 d~Vv~NlPy~ 228 (397)
|.|+...|..
T Consensus 71 d~vi~~~~~~ 80 (140)
T 1lss_A 71 DMYIAVTGKE 80 (140)
T ss_dssp SEEEECCSCH
T ss_pred CEEEEeeCCc
Confidence 8888777643
No 496
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=81.94 E-value=2.8 Score=39.95 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=38.6
Q ss_pred HHhcCCCC--CEEEEEcC--cccHHHHHHHH-cCC-cEEEEeCCHHHHHHHHHHh
Q 015990 135 AAAAVQEG--DIVLEIGP--GTGSLTNVLLN-AGA-TVLAIEKDQHMVGLVRERF 183 (397)
Q Consensus 135 ~~~~~~~~--~~VLEIG~--G~G~lt~~La~-~~~-~V~~vE~d~~~i~~a~~~~ 183 (397)
+...++++ ++||=.|+ |.|..+..+++ .|+ +|++++.+++..+.+++.+
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~ 206 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL 206 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 56678889 99999997 56776666666 488 9999999988887776644
No 497
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=81.89 E-value=0.64 Score=45.21 Aligned_cols=20 Identities=10% Similarity=0.182 Sum_probs=16.6
Q ss_pred CEEEEEcCcccHHHHHHHHc
Q 015990 143 DIVLEIGPGTGSLTNVLLNA 162 (397)
Q Consensus 143 ~~VLEIG~G~G~lt~~La~~ 162 (397)
-+|+|+||++|..|..+...
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ 72 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTE 72 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGT
T ss_pred eEEEecCCCCCcchHHHHHH
Confidence 47999999999998876553
No 498
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=81.81 E-value=2.9 Score=37.68 Aligned_cols=85 Identities=12% Similarity=0.147 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcccHHHHHHH----HcC---CcEEEEeCCHHHHHHHHHHhccCCceEEEEccccccchhhhhhhHHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTNVLL----NAG---ATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~~La----~~~---~~V~~vE~d~~~i~~a~~~~~~~~~v~ii~gD~~~~~~~~~~~~~~~~~~ 213 (397)
.+++||=.|+ +|.++..++ +.| .+|++++.+++..+.+++.....+++.++.+|+.+...-..+.+.+.+..
T Consensus 20 ~~k~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 98 (267)
T 1sny_A 20 HMNSILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 98 (267)
T ss_dssp CCSEEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence 4567888885 455655554 457 89999999875444333332223579999999987643222222111101
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
.....|.+|.|--
T Consensus 99 g~~~id~li~~Ag 111 (267)
T 1sny_A 99 KDQGLNVLFNNAG 111 (267)
T ss_dssp GGGCCSEEEECCC
T ss_pred CCCCccEEEECCC
Confidence 1115788887753
No 499
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=81.79 E-value=3.1 Score=36.92 Aligned_cols=82 Identities=17% Similarity=0.180 Sum_probs=48.1
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEE-eCCHHHHHHHHHHhcc-CCceEEEEccccccchhhhhhh-HHhhhc
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAI-EKDQHMVGLVRERFAS-IDQLKVLQEDFVKCHIRSHMLS-LFERRK 213 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~v-E~d~~~i~~a~~~~~~-~~~v~ii~gD~~~~~~~~~~~~-~~~~~~ 213 (397)
.+++||=.|++ |.++. .|++.|++|+++ ..+++..+.+.+.+.. ..++.++.+|+.+...-....+ ..+
T Consensus 4 ~~~~vlItGas-ggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--- 79 (247)
T 2hq1_A 4 KGKTAIVTGSS-RGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD--- 79 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH---
T ss_pred CCcEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH---
Confidence 35678878854 54544 445568999999 5665555444444332 2478999999987542211111 111
Q ss_pred CCCCcceEeecCC
Q 015990 214 SSSGFAKVVANIP 226 (397)
Q Consensus 214 ~~~~~d~Vv~NlP 226 (397)
..+..|.||.|--
T Consensus 80 ~~~~~d~vi~~Ag 92 (247)
T 2hq1_A 80 AFGRIDILVNNAG 92 (247)
T ss_dssp HHSCCCEEEECC-
T ss_pred hcCCCCEEEECCC
Confidence 1246788888754
No 500
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=81.69 E-value=4.6 Score=36.21 Aligned_cols=82 Identities=20% Similarity=0.197 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcccHHHH----HHHHcCCcEEEEeCCHHHHHHHHHHhccC--------CceEEEEccccccchhhhhhhH
Q 015990 141 EGDIVLEIGPGTGSLTN----VLLNAGATVLAIEKDQHMVGLVRERFASI--------DQLKVLQEDFVKCHIRSHMLSL 208 (397)
Q Consensus 141 ~~~~VLEIG~G~G~lt~----~La~~~~~V~~vE~d~~~i~~a~~~~~~~--------~~v~ii~gD~~~~~~~~~~~~~ 208 (397)
.+++||=.|++ |.++. .|++.|++|++++.+++-.+.+.+.+... .++.++.+|+.+...-....+.
T Consensus 6 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 6 RSALALVTGAG-SGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 35678888865 44544 44556899999999987766555443221 3688999998875422111111
Q ss_pred HhhhcCCCCc-ceEeecC
Q 015990 209 FERRKSSSGF-AKVVANI 225 (397)
Q Consensus 209 ~~~~~~~~~~-d~Vv~Nl 225 (397)
..+ ..+.. |.||.|-
T Consensus 85 ~~~--~~g~i~d~vi~~A 100 (264)
T 2pd6_A 85 VQA--CFSRPPSVVVSCA 100 (264)
T ss_dssp HHH--HHSSCCSEEEECC
T ss_pred HHH--HhCCCCeEEEECC
Confidence 111 11344 8888774
Done!