Citrus Sinensis ID: 015991


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MATVASGSATLVLINRRSTPKSKPPSSPFLGKRLVLIKPFSKNNISSSLTTKAELIDTVRDVFLGVGVGLPCTVMECGDIIYRSTLPKSNGLTITAPGVALALSAISYLWATPGVAPGFFDMFVLAFVERLFRTTYRKDDFVLGKKLGEGAFGVVYRASLAKKPSSKNDGDLVLKKATEYGAVEIWMNERVRRACANCCADFVYGFFENSSKKGGEYWLIWRYEGEATLADLMISREFPYNVQTLILGEVQDLPKGIERENRIIQTIMSQLLFALDGLHSTGIVHRDIKPQNVIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMVCTVRRLCLHSCPLAYSL
ccccccccEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHccEEEEccccccccCECcccEEEccccccccccccccHHHHHHcccEEEEECcccccccHHHHHHHHHHHHHHccccccccEEEEEEEECcccEEEEEEEEcccccccccccEEEEEEcccHHHHHHHHHHHHHHHHccccccEEEEEEcccccccCEEEEEEEcccccHHHHHHHcccccccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccEEEEEccccccccccccccccCEEccccccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHHHccccccccccccccccc
********ATLVL****************************KNNISSSLTTKAELIDTVRDVFLGVGVGLPCTVMECGDIIYRSTLPKSNGLTITAPGVALALSAISYLWATPGVAPGFFDMFVLAFVERLFRTTYRKDDFVLGKKLGEGAFGVVYRASLAKKPSSKNDGDLVLKKATEYGAVEIWMNERVRRACANCCADFVYGFFENSSKKGGEYWLIWRYEGEATLADLMISREFPYNVQTLILGEVQDLPKGIERENRIIQTIMSQLLFALDGLHSTGIVHRDIKPQNVIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMVCTVRRLCLHSCPLAYSL
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MATVASGSATLVLINRRSTPKSKPPSSPFLGKRLVLIKPFSKNNISSSLTTKAELIDTVRDVFLGVGVGLPCTVMECGDIIYRSTLPKSNGLTITAPGVALALSAISYLWATPGVAPGFFDMFVLAFVERLFRTTYRKDDFVLGKKLGEGAFGVVYRASLAKKPSSKNDGDLVLKKATEYGAVEIWMNERVRRACANCCADFVYGFFENSSKKGGEYWLIWRYEGEATLADLMISREFPYNVQTLILGEVQDLPKGIERENRIIQTIMSQLLFALDGLHSTGIVHRDIKPQNVIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMVCTVRRLCLHSCPLAYSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine/threonine-protein kinase STN7, chloroplastic Serine/threonine protein kinase required for state transition by phosphorylating light-harvesting complex II outer antennae (LCHII). State transition plays a central role in response to environmental changes and allows to adjust to changing light conditions via the redistribution of light excitation energy between photosystem II (PSII) and photosystem I (PSI). Phosphorylates the minor light harvesting protein LHCB4.2/CP29 and is involved in the light-dependent phosphorylation of TSP9. Acts as a key component of the long-term response (LTR) signaling pathway.probableQ9S713

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.11.-Protein-serine/threonine kinases.probable
2.7.11.1Transferred entry: 2.7.11.19.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2VWI, chain A
Confidence level:very confident
Coverage over the Query: 137-178,194-238,251-314,326-339,361-389
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Template: 3VHE, chain A
Confidence level:very confident
Coverage over the Query: 252-337,360-391
View the alignment between query and template
View the model in PyMOL
Template: 1R0E, chain A
Confidence level:probable
Coverage over the Query: 104-117,129-247,262-334
View the alignment between query and template
View the model in PyMOL
Template: 3NIE, chain A
Confidence level:probable
Coverage over the Query: 264-310,343-384
View the alignment between query and template
View the model in PyMOL