Query 015997
Match_columns 397
No_of_seqs 214 out of 1058
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 06:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gwd_A Glutamate cysteine liga 100.0 2.2E-78 7.5E-83 622.3 28.8 354 40-393 1-354 (449)
2 1r8g_A Hypothetical protein YB 100.0 2.8E-53 9.6E-58 426.3 20.0 255 67-385 4-264 (372)
3 3ln6_A Glutathione biosynthesi 99.9 8.6E-28 2.9E-32 259.9 15.2 227 72-367 17-288 (750)
4 1va6_A Glutamate--cysteine lig 99.9 5.7E-26 1.9E-30 234.5 14.8 269 61-385 9-357 (518)
5 3ln7_A Glutathione biosynthesi 99.9 4.4E-24 1.5E-28 230.7 14.2 225 73-367 18-293 (757)
6 3nzt_A Glutamate--cysteine lig 99.8 5E-21 1.7E-25 197.2 13.6 207 63-302 19-274 (525)
7 3ig5_A Glutamate-cysteine liga 99.8 5.5E-19 1.9E-23 183.6 19.3 206 58-278 28-325 (692)
8 2d3a_A Glutamine synthetase; l 97.4 0.00074 2.5E-08 66.9 11.0 49 129-181 188-237 (356)
9 3fky_A Glutamine synthetase; b 97.4 0.0028 9.6E-08 63.0 14.5 45 129-174 189-234 (370)
10 2ojw_A Glutamine synthetase; a 97.3 0.0027 9.3E-08 63.4 13.7 49 129-181 211-260 (384)
11 1f52_A Glutamine synthetase; A 97.2 0.0015 5E-08 67.0 11.2 90 129-250 208-313 (468)
12 4hpp_A Probable glutamine synt 97.2 0.0029 9.8E-08 64.4 12.6 145 57-252 112-284 (443)
13 3qaj_A Glutamine synthetase; A 97.0 0.0067 2.3E-07 61.7 13.7 99 57-174 112-230 (444)
14 3ng0_A Glutamine synthetase; G 96.8 0.013 4.4E-07 60.0 13.2 90 129-250 211-316 (473)
15 4acf_A Glutamine synthetase 1; 96.7 0.024 8.2E-07 58.2 14.8 90 129-250 223-329 (486)
16 3o6x_A Glutamine synthetase; t 96.3 0.015 5.1E-07 61.9 10.4 49 129-181 282-331 (729)
17 2j9i_A Glutamate-ammonia ligas 92.2 0.029 9.8E-07 56.6 0.3 104 57-174 103-216 (421)
18 2bp3_S Platelet glycoprotein I 38.8 6.5 0.00022 23.0 -0.0 14 345-358 9-22 (26)
19 4b0t_A PUP--protein ligase; pu 31.5 41 0.0014 34.1 4.5 74 73-154 10-85 (493)
No 1
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=100.00 E-value=2.2e-78 Score=622.35 Aligned_cols=354 Identities=88% Similarity=1.432 Sum_probs=325.7
Q ss_pred ecCCCCCCcccCCCCCCHHHHHHHHHcCCCCCCCCeeEEEecccccccCCCCCCChhHHHHHHHHHhhccccchhccCcc
Q 015997 40 AASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDY 119 (397)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~iGvElE~~lVD~~t~~p~~~~~i~~lL~~l~~~~~~~~~~~~g~ 119 (397)
|||||+++++..+++.++++|++||++|||++++++||+|+|+++||.+|++++++..+.++|+.+.+.++|++..++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iGvE~E~~lVd~~~~~~~~~~~~~~lL~~l~~~~g~~~~~~~~~ 80 (449)
T 2gwd_A 1 AASPPTEEAVVATEPLTREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTLRPMKYDQIAELLNSIAERFEWEKVMEGDK 80 (449)
T ss_dssp -------------CCCCHHHHHHHHHTTCCCGGGCCEEEEEEEEEEETTTCCBCCHHHHHHHHHHHHHHHTCEEEEETTE
T ss_pred CCCCCCcccccCCCccCHHHHHHHHHhcCCCCCCCeEEEEeEEEeeecCCCCCCChHHHHHHHHHHHHhhccCccccccc
Confidence 68999999999999999999999999999999999999999999999988999997656899999988788888888999
Q ss_pred ccccccCCceeeecCCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCchHHHHHH
Q 015997 120 IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMR 199 (397)
Q Consensus 120 ~i~l~~e~~~itlEp~~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~~~~i~p~~RY~~m~ 199 (397)
++++++++.+|++||++|||++|+||.++.+++++|...++.++++++++|++|+++|+||+.++.+.+++|++||+.|.
T Consensus 81 ~~~l~~~~~~i~~E~~~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~ 160 (449)
T 2gwd_A 81 IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTMPKGRYDIMR 160 (449)
T ss_dssp EEEEEETTEEEEECTTCCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCCSCHHHHHHH
T ss_pred cccccCCCceEEecCCceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCceeeccCCCCCCccccCCCCchHHHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999988788999999999999
Q ss_pred HhcccccchhhhhhcccceeEeeeCCCCHHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCC
Q 015997 200 NYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAG 279 (397)
Q Consensus 200 ~~~~~~g~~g~~~m~~t~s~qVhl~~~~~~~~~~~~n~~~~l~P~llALsANSPf~~G~~tg~~s~R~~iw~~~~~~Rtg 279 (397)
++|++.|..|++||.+|||+||||++++++++++++|.++++.|+++|||||||||+|++|||+|+|+.+|+++|++|+|
T Consensus 161 ~~~~~~g~~g~~mm~~~~g~qVhl~~~~~~~~~~~~~~~~~~~P~llALsAnSPf~~G~~tg~~S~R~~~w~~~~~~r~G 240 (449)
T 2gwd_A 161 NYMPKVGSLGLDMMLRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFLSMRSHIWTDTDKDRTG 240 (449)
T ss_dssp HHGGGTCSSHHHHHHHBCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHCCBCEETTEECSCSBHHHHHTTSSCGGGCS
T ss_pred HHHHHhchhHHHHhhcceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccccCcCCCcchHHHHHhhCCCCcCC
Confidence 99987888999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred CCCCCCCCchhHHHHHHHHhcCCceeEeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhccCCCCCCCccCeee
Q 015997 280 MLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLE 359 (397)
Q Consensus 280 ~~P~~f~~~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~~~~~~~~~~g~~p~l~dl~~Hlstifp~vR~r~~IE 359 (397)
.+|+.|+++++|++|+++++++|||||.++|.++++++.+|+||+.++.+.+.|+.|+++||.+|+||+|||||+|+|||
T Consensus 241 ~~p~~f~~~~~~e~yv~~l~~~~~~~v~~~g~~~~~~~~~f~~~l~~~l~~~~~~~p~~~d~~~~~st~~~~vRpk~~iE 320 (449)
T 2gwd_A 241 MLPFVFDDSFGFEQYVDYALDVPMYFAYRNGKYVDCTGMTFRQFLAGKLPCLPGELPTYNDWENHLTTIFPEVRLKRYME 320 (449)
T ss_dssp CCGGGGSTTCSHHHHHHHHHHSCEEEEEETTEEEEEEEECHHHHHTTCCTTSTTCCCCHHHHHHHHTTCCCSEEESSSEE
T ss_pred CCCcccCCccCHHHHHHHHHcCCceEeecCCccccCCcchHHHhhhcccccccCCCCCHHHHHhhhcccCcccCcCCceE
Confidence 88889999999999999999999999999999999999999999999888788999999999999999999999999999
Q ss_pred eecCCCCChHHHhHHHHHHHHHHhchhhhHHHHh
Q 015997 360 MRGADGGPWRRLCALPAFWVVASLFCFYIISILC 393 (397)
Q Consensus 360 iR~~Da~P~~~~~A~aAf~~GLl~~~~~~~~~~~ 393 (397)
+|++|+||..+++|++||++||++++..++..+.
T Consensus 321 ~R~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~ 354 (449)
T 2gwd_A 321 MRGADGGPWRRLCALPAFWVGLLYDEDVLQSVLD 354 (449)
T ss_dssp EEEEECCCHHHHHHHHHHHHHHHSSHHHHHHHHH
T ss_pred eecCCCCCcHHHHHHHHHHHHHHhhHHhhhhhHh
Confidence 9999999999999999999999999877665543
No 2
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=100.00 E-value=2.8e-53 Score=426.27 Aligned_cols=255 Identities=16% Similarity=0.151 Sum_probs=215.9
Q ss_pred CCC-CCCCCeeEEEecccccccCCCCCCChhHHHHHHHHHhhccccchhccCccccccccCCceeeecC-CceeEeecCc
Q 015997 67 GCK-PKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEP-GGQFELSGAP 144 (397)
Q Consensus 67 ~~k-~~~~~~iGvElE~~lVD~~t~~p~~~~~i~~lL~~l~~~~~~~~~~~~g~~i~l~~e~~~itlEp-~~qiElst~p 144 (397)
.|| +++++++|||+|+++||++|+++++++ .++|+.+.+.. .+..|+.|+ ++|||++|+|
T Consensus 4 ~~F~~~~~~~~GiE~E~~~Vd~~~g~~~~~~--~~~l~~~~~~~----------------~~~~it~E~~~~qlEl~t~p 65 (372)
T 1r8g_A 4 PDFHVSEPFTLGIELEMQVVNPPGYDLSQDS--SMLIDAVKNKI----------------TAGEVKHDITESMLELATDV 65 (372)
T ss_dssp CCCCCCCTTCEEEEEEEEEEETTTTEECSCC--HHHHTTTSSSC----------------SSSEEEECSSSSEEEEECCS
T ss_pred CCCCCCCCCceEEEEEEeeECCCCCCcCccH--HHHHHhchhcc----------------cCCcccchhhccEEEecCCC
Confidence 355 478899999999999999889999998 78887553311 134799997 7999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeeeC
Q 015997 145 LETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLD 224 (397)
Q Consensus 145 ~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~~~~i~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhl~ 224 (397)
|.++.+++++|.+.++.+.++++++|++|+++|+||+..+.+.++++|+||+.|.++| |..++.|+ +||+||||+
T Consensus 66 ~~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~---g~~~~~~~--i~g~hvhv~ 140 (372)
T 1r8g_A 66 CRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENF---GYLIQQAT--VFGQHVHVG 140 (372)
T ss_dssp BSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CC---GGGGCSCC--BCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHH---HHHHHhhc--eeeEEEEeC
Confidence 9999999999999999999999999999999999999988888999999999999998 55677787 999999999
Q ss_pred CCCHHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCCce
Q 015997 225 FSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMY 304 (397)
Q Consensus 225 ~~~~~~~~~~~n~~~~l~P~llALsANSPf~~G~~tg~~s~R~~iw~~~~~~Rtg~~P~~f~~~~~~e~y~~~ll~~p~i 304 (397)
+++++++++++|.++.++|+++|||||||||+|++|||+|+|+.+|++++ |+|. |+.|.++++|++|++.+++++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~p~l~aL~anSPf~~G~~tg~~s~R~~~~~~~p--~~g~-~~~f~~~~~y~~~~~~~l~~g~~ 217 (372)
T 1r8g_A 141 CASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFP--DNGP-MPWVSNWQQFEALFRCLSYTTMI 217 (372)
T ss_dssp CSSHHHHHHHHHHHHTTHHHHHHHHCCBCEETTEECSCSBCGGGGGTTST--TCSS-CCCCSSHHHHHHHHHHHTTSSSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcHHHHHHHHHcCC--ccCC-CcccCCHHHHHHHHHHHHHCCCc
Confidence 99999999999999999999999999999999999999999999999997 7775 66899999999999999887654
Q ss_pred eEeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhccCCCCCCCccC---eeeeecCCCCC-hHHHhHHHHHHHH
Q 015997 305 FVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKR---YLEMRGADGGP-WRRLCALPAFWVV 380 (397)
Q Consensus 305 ~v~r~~~~~~~~~~~f~d~~~~~~~~~~g~~p~l~dl~~Hlstifp~vR~r~---~IEiR~~Da~P-~~~~~A~aAf~~G 380 (397)
.|.+++|+|||||. |||+|++|++| ..+++|++||+.|
T Consensus 218 --------------------------------------~~~~~~y~~vRpk~~~~~IE~R~~D~~p~~~~~~a~aa~~~~ 259 (372)
T 1r8g_A 218 --------------------------------------DSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQA 259 (372)
T ss_dssp --------------------------------------SSGGGCCCSEEEETTTTEEEEEEEECCSSHHHHHHHHHHHHH
T ss_pred --------------------------------------CcCCeeccccccCCCCCceEEeccCCCCCHHHHHHHHHHHHH
Confidence 36899999999996 99999999999 6999999999999
Q ss_pred HHhch
Q 015997 381 ASLFC 385 (397)
Q Consensus 381 Ll~~~ 385 (397)
|++.+
T Consensus 260 l~~~~ 264 (372)
T 1r8g_A 260 TAHWL 264 (372)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99987
No 3
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.95 E-value=8.6e-28 Score=259.88 Aligned_cols=227 Identities=17% Similarity=0.169 Sum_probs=176.1
Q ss_pred CCCeeEEEecccccccCCCCCCChhHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHH
Q 015997 72 EKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQ 150 (397)
Q Consensus 72 ~~~~iGvElE~~lVD~~t~~p~~~~~i~~lL~~l~~~~~~~~~~~~g~~i~l~~e~~~itlE-p~~qiElst~p~~~l~~ 150 (397)
...++|||.|+++||+.+|+.++... .++|.. ......|+.| ..+|+|+.|+||.++.+
T Consensus 17 ~~~~~GiE~E~lrvd~~~g~la~~~~-p~~lg~-------------------~~~~~~i~~d~~es~lE~~Tpv~~~~~~ 76 (750)
T 3ln6_A 17 LQATFGLERESLRIHQPTQRVAQTPH-PKTLGS-------------------RNYHPYIQTDYSEPQLELITPIAKDSQE 76 (750)
T ss_dssp TCEEEEEEEEEEEEETTTTEECCCCC-CSSSCC-------------------TTTCSSEEESSBSSEEEEECCCBSSHHH
T ss_pred ccCCceEEEEeeEecCCcCCcCCCcc-hHHhcC-------------------cccCCCccchhhhhheeeeCcCCCCHHH
Confidence 46799999999999997777654320 122210 1011256666 47999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCC-----CchHHHH-HHHhcccccchhhhhhcccceeEeeeC
Q 015997 151 TCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVM-----PKGRYEI-MRNYMPKVGSLGLDMMFRTCTVQVNLD 224 (397)
Q Consensus 151 l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~~~~i~-----p~~RY~~-m~~~~~~~g~~g~~~m~~t~s~qVhl~ 224 (397)
+.++|.+.++.+.+.++ .|..|+++|++|....+++++. +++||+. |.+.| | ++.++ +||+|||++
T Consensus 77 ~~~~L~~l~~~~~~~~~-~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~~ry---g--~~~q~--i~G~Hvn~~ 148 (750)
T 3ln6_A 77 AIRFLKAISDVAGRSIN-HDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLEKTY---G--KLIQS--ISGIHYNLG 148 (750)
T ss_dssp HHHHHHHHHHHHHHHSC-TTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHHHHH---C--TGGGG--CCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhc-CCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHHHHh---C--hhhce--eeeEEEEec
Confidence 99999999999998876 7889999999998765566666 6999997 88877 3 45555 999999999
Q ss_pred CCCHHH-------------------HHHHHHHHhhhHHHHHHHhhCCCCC-----CCCCCCC-ccccHHHHhcCCCCCCC
Q 015997 225 FSSEAD-------------------MIRKFRAGLALQPIATALFANSPFT-----EGKPNGY-LSMRSHIWTDTDNNRAG 279 (397)
Q Consensus 225 ~~~~~~-------------------~~~~~n~~~~l~P~llALsANSPf~-----~G~~tg~-~s~R~~iw~~~~~~Rtg 279 (397)
++++.. ..+.+|.++++.|+|+|||+||||| .|++|++ .|+|...|..++ ++
T Consensus 149 ~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~~r~~w~l~~L~gaSP~~~~~f~~g~~~~~~~S~R~s~~g~~~--~~- 225 (750)
T 3ln6_A 149 LGQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPVAEEDFLDQKLNNPVRSLRNSHLGYVN--HK- 225 (750)
T ss_dssp ECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSCSSCTTTCCCSBSTTSSSSSCC--CT-
T ss_pred CChHHHHHHhhccccchHHHHhhhHHHHHHHHHHhHHHHHHHHhhCCccccccccCCCCCCceeeeeccccCCCC--CC-
Confidence 997541 2356788888999999999999999 6788884 799999999997 44
Q ss_pred CCCCCCCCchhHHHHHHHHhcCCceeEeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhccCCCCCCCccC---
Q 015997 280 MLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKR--- 356 (397)
Q Consensus 280 ~~P~~f~~~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~~~~~~~~~~g~~p~l~dl~~Hlstifp~vR~r~--- 356 (397)
++|..|.|+..|.++++.+.++++|. . .+.+|++||||+
T Consensus 226 ~~~~~~~s~~~Y~~~l~~~v~~g~l~-------------~-------------------------~~e~y~~iRpk~~~p 267 (750)
T 3ln6_A 226 DIRISYTSLKDYVNDLENAVKSGQLI-------------A-------------------------EKEFYSPVRLRGSKA 267 (750)
T ss_dssp TCCCCCSSHHHHHHHHHHCCTTTC---------------C-------------------------GGGCCCSEEEESCSS
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCCcc-------------c-------------------------CCceeEeecCCCCCC
Confidence 46778999877777777777666552 1 233567788773
Q ss_pred ----------eeeeecCCCCC
Q 015997 357 ----------YLEMRGADGGP 367 (397)
Q Consensus 357 ----------~IEiR~~Da~P 367 (397)
|||+|++|..|
T Consensus 268 ~~~l~~~Gi~yiE~R~~D~~p 288 (750)
T 3ln6_A 268 CRNYLEKGITYLEFRTFDLNP 288 (750)
T ss_dssp TTTTTTTCCCEEEECCCCCCT
T ss_pred chhHhhCCCCeEEEEeecCCC
Confidence 79999999999
No 4
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=99.93 E-value=5.7e-26 Score=234.53 Aligned_cols=269 Identities=18% Similarity=0.213 Sum_probs=189.7
Q ss_pred HHHHHcCCCCCCCCeeEEEecccccccCCCCCC--ChhHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCce
Q 015997 61 VGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPM--KYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQ 137 (397)
Q Consensus 61 ~~~~~~~~k~~~~~~iGvElE~~lVD~~t~~p~--~~~~i~~lL~~l~~~~~~~~~~~~g~~i~l~~e~~~itlE-p~~q 137 (397)
..++.+....=...++|||.|.+.||++ |..+ |.. . .|. .. +. ...|+-| ..+|
T Consensus 9 l~~l~~~~~~l~~~~~GIE~E~lrVd~~-G~La~tphP--~-~lg---s~--------------lt--~~~IttDfsEsq 65 (518)
T 1va6_A 9 LAWLEKHPQALKGIQRGLERETLRVNAD-GTLATTGHP--E-ALG---SA--------------LT--HKWITTDFAEAL 65 (518)
T ss_dssp HHHHHHSGGGGTTCEEEEEEEEEEECTT-SCBCCSCSC--G-GGC---CT--------------TT--CSSEEECSBTTE
T ss_pred HHHhhcCHHHHhcCCcceEeeeeEECCC-CCCCCCCCh--H-HHh---cc--------------cc--CCCcCCCcchhh
Confidence 4455544332346799999999999996 7753 322 1 111 10 11 1256667 4699
Q ss_pred eEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-CCCC---------CCchHHH-HHHHhccccc
Q 015997 138 FELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPV---------MPKGRYE-IMRNYMPKVG 206 (397)
Q Consensus 138 iElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~-~~~i---------~p~~RY~-~m~~~~~~~g 206 (397)
||+.|+||.++.++.++|.+..+.+...+ .|..|++.++.|..+.. ..++ ..|.||+ .|.++| |
T Consensus 66 lE~iTpv~~s~~eal~~L~~l~~~v~~~l--~~e~Lwp~SmP~~l~~~~~IpiA~yg~s~~g~~k~~Yr~~L~~rY---G 140 (518)
T 1va6_A 66 LEFITPVDGDIEHMLTFMRDLHRYTARNM--GDERMWPLSMPSYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRY---G 140 (518)
T ss_dssp EEEECCCBSCHHHHHHHHHHHHHHHHTSS--TTCEECCSSSCSSCCTTCCCCBCCCCSSHHHHHHHHHHHHHHHHH---C
T ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHHc--CCCeEeecCCCCCCCCCCCCccccccccccCccchHHHHHHHHHh---C
Confidence 99999999999999999999999999888 49999998888876532 3344 3679999 588887 3
Q ss_pred chhhhhhcccceeEeeeCCCCH-------------------HHHHHHHHHHhhhHHHHHHHhhCCC-----CCCCCCCCC
Q 015997 207 SLGLDMMFRTCTVQVNLDFSSE-------------------ADMIRKFRAGLALQPIATALFANSP-----FTEGKPNGY 262 (397)
Q Consensus 207 ~~g~~~m~~t~s~qVhl~~~~~-------------------~~~~~~~n~~~~l~P~llALsANSP-----f~~G~~tg~ 262 (397)
+..++ +||+|||+++++. +..++.+|.++.+.|+|++||+||| ||.|++||+
T Consensus 141 --~~~q~--IsGiH~N~s~~d~l~~~l~~~~~~~~~~~~~~~~y~~lirn~~r~~wlL~yLfgASP~~~~sF~~g~~t~l 216 (518)
T 1va6_A 141 --ALMQT--ISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAISSSFLQGKPTSL 216 (518)
T ss_dssp --HHHHT--CCEEEEEEECCHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCBSEECGGGC----CCS
T ss_pred --cchhe--eeeEEEEEecCHHHHHHHHhhccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCccccccccCCCCCCc
Confidence 34555 9999999999986 3677788899999999999999999 889999988
Q ss_pred c---------------cccHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCCc-----eeEeecCccccCCCCcHHH
Q 015997 263 L---------------SMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPM-----YFVYRKKKYIDCAGMSFRD 322 (397)
Q Consensus 263 ~---------------s~R~~iw~~~~~~Rtg~~P~~f~~~~~~e~y~~~ll~~p~-----i~v~r~~~~~~~~~~~f~d 322 (397)
. |+|...|......+.| +++.|.|+..|.++++.++++|- |=+.++|+|.-
T Consensus 217 ~~~~~~~~t~y~p~atSlR~s~~Gy~n~~q~~-l~~~y~sl~~Y~~~l~~~i~tp~~~y~~ig~~~~g~~~Q-------- 287 (518)
T 1va6_A 217 PFEKTESGMYYLPYATSLRLSDLGYTNKSQSN-LGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQ-------- 287 (518)
T ss_dssp CCEECTTSCEECTTCSBGGGSTTSSCCGGGTT-SCCCSSCHHHHHHHHHHHHTCBCHHHHTTCSEETTEECC--------
T ss_pred cccccccccccCCCcccccccccCCCCCccCC-CCCCcCCHHHHHHHHHHHHhCccchhhhhccccccchhc--------
Confidence 4 9998777444322345 57789999999999999888651 11122332211
Q ss_pred HhhCCCCCCCCCCCChh-hhhhhccCCCCCCCccC------------------eeeeecCCCCCh-H--HHhHHHHHHHH
Q 015997 323 FLAGKLPCLPGELPTLN-DWENHLTTIFPEVRLKR------------------YLEMRGADGGPW-R--RLCALPAFWVV 380 (397)
Q Consensus 323 ~~~~~~~~~~g~~p~l~-dl~~Hlstifp~vR~r~------------------~IEiR~~Da~P~-~--~~~A~aAf~~G 380 (397)
++ ..-...+.+|.+||||+ |||+|++|..|. + ...+.++|+..
T Consensus 288 ---------------lntg~Lq~e~E~Y~~IRpk~~~~~ge~~~~aL~~~Gi~yIEvR~~DvnPf~~~Gi~~~~~~fl~~ 352 (518)
T 1va6_A 288 ---------------INSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDL 352 (518)
T ss_dssp ---------------SCSBSCSSGGGCCCSEEEECCCCTTCCHHHHHHHHCCCEEEEEEEECCTTSTTSCCHHHHHHHHH
T ss_pred ---------------cccccccccCeeeeccccCCCCCCCcCcHHHHHhCCCCeEEEEeccCCCCccccccHHHHHHHHH
Confidence 11 01122455688999873 899999999993 4 55666777777
Q ss_pred HHhch
Q 015997 381 ASLFC 385 (397)
Q Consensus 381 Ll~~~ 385 (397)
++..+
T Consensus 353 fl~~~ 357 (518)
T 1va6_A 353 FMVWC 357 (518)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66555
No 5
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.90 E-value=4.4e-24 Score=230.68 Aligned_cols=225 Identities=17% Similarity=0.185 Sum_probs=163.7
Q ss_pred CCeeEEEecccccccCCCCCCChhHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHH
Q 015997 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQT 151 (397)
Q Consensus 73 ~~~iGvElE~~lVD~~t~~p~~~~~i~~lL~~l~~~~~~~~~~~~g~~i~l~~e~~~itlE-p~~qiElst~p~~~l~~l 151 (397)
..++|||.|+++||+ +|..+.... .++|.. ......|+.| ..+|+|+.|+||.++.++
T Consensus 18 ~~~~GiE~E~lrVd~-~g~la~~~h-p~~lg~-------------------~~~~~~i~td~ses~lE~iTpv~~~~~~~ 76 (757)
T 3ln7_A 18 QGSFGLEKESQRVTA-DGAIVTTPH-PAVFGN-------------------RRYHPYIQTDFAESQLELITPPTKKLEDT 76 (757)
T ss_dssp CEEEEEEEEEECEET-TSBBCCSCC-CSSSCC-------------------TTTCSSEECSSSTTEEEEEEEEESSHHHH
T ss_pred cCCceEEeEeeEECC-CCCcCCCcC-hHHhcC-------------------cccCCCCCchhhhhheeeeCcCCCCHHHH
Confidence 569999999999999 576544320 112210 0011256666 479999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCC-CCCCCC-----CchHHHH-HHHhcccccchhhhhhcccceeEeeeC
Q 015997 152 CAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL-KDIPVM-----PKGRYEI-MRNYMPKVGSLGLDMMFRTCTVQVNLD 224 (397)
Q Consensus 152 ~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~-~~~~i~-----p~~RY~~-m~~~~~~~g~~g~~~m~~t~s~qVhl~ 224 (397)
.++|.+..+.+.+.+. .|..|++.|++|.... .+.++. +++||+. |.+.| | ++.++ +||+|||++
T Consensus 77 ~~~L~~l~~~~~~~~~-~~e~lwp~smp~~l~~~~~ip~a~~~~~~~~~Yr~~L~~ry---G--~~~q~--i~GiH~n~s 148 (757)
T 3ln7_A 77 FRWLSVIHEVVQRSLP-EEEYIFPLSMPAGLPAEEQIRVAQLDNPEDVAYREYLVKIY---G--KNKQM--VSGIHYNFQ 148 (757)
T ss_dssp HHHHHHHHHHHHHHSC-TTEECCCSSSCSBCCC---CCCCCCSSHHHHHHHHHHHHHH---C--SHHHH--CCCCEEEEE
T ss_pred HHHHHHHHHHHHHHhc-CCCceeeccCCCcCCCCCCCCccccCCCccHHHHHHHHHHh---c--hhhce--eeeEEEEEe
Confidence 9999999999988865 5778888888776442 233444 5899996 88877 3 34556 899999999
Q ss_pred CCCHH--------------------HHHHHHHHHhhhHHHHHHHhhCCCCC-----CCC----CCCCc-cccHHHHhcCC
Q 015997 225 FSSEA--------------------DMIRKFRAGLALQPIATALFANSPFT-----EGK----PNGYL-SMRSHIWTDTD 274 (397)
Q Consensus 225 ~~~~~--------------------~~~~~~n~~~~l~P~llALsANSPf~-----~G~----~tg~~-s~R~~iw~~~~ 274 (397)
+++.. -..+.+|.++.+.|+|++||+|||+| .|+ ++++. |+|...|..++
T Consensus 149 ~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~~r~~wll~yL~gaSP~~~~~f~~g~~~~~~~~~~~S~R~s~~gy~~ 228 (757)
T 3ln7_A 149 LSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNFLRYQWILLYLLAATPTVESAYFKDGSPLAKGQFVRSLRSSQYGYVN 228 (757)
T ss_dssp ECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC----CTTTCSSCCSSCCCSBSTTSSSSCCC
T ss_pred cChHHHHHHhhhcccchhHHHHHhHHHHHHHHhhHhHHHHHHHHhhCCcccccccccCCCCCCCCCCcccccccccCCCC
Confidence 99741 11335677788999999999999999 552 23343 99999999987
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHhcCCceeEeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhccCCCCCCCc
Q 015997 275 NNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRL 354 (397)
Q Consensus 275 ~~Rtg~~P~~f~~~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~~~~~~~~~~g~~p~l~dl~~Hlstifp~vR~ 354 (397)
+. ++|..|.|+..|.++++.++++.+|.. .+.+|++|||
T Consensus 229 --~~-~~~~~~~s~~~Y~~~l~~~v~~g~l~~--------------------------------------~~e~y~~iRp 267 (757)
T 3ln7_A 229 --DP-EINVSFDSVEKYVESLEHWVSTGKLIA--------------------------------------EKEFYSNVRL 267 (757)
T ss_dssp --CS-SCCCCCSCHHHHHHHHHHHHHC-CCSS--------------------------------------STTCCCSEEE
T ss_pred --CC-CCCCCcCCHHHHHHHHHHHHHcCCccc--------------------------------------cCceeeeecC
Confidence 34 567799998888888888887766621 2335677887
Q ss_pred cC-------------eeeeecCCCCC
Q 015997 355 KR-------------YLEMRGADGGP 367 (397)
Q Consensus 355 r~-------------~IEiR~~Da~P 367 (397)
|+ |||+|++|..|
T Consensus 268 k~~~p~~~l~~~Gi~yiEvR~~D~~P 293 (757)
T 3ln7_A 268 RGAKKAREFLTTGIQYLEFRLFDLNP 293 (757)
T ss_dssp ESCSSGGGHHHHCCCEEEECCCCCCT
T ss_pred CCCCChhhHHhCCCCEEEEEeccCCC
Confidence 72 69999999988
No 6
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=99.84 E-value=5e-21 Score=197.19 Aligned_cols=207 Identities=17% Similarity=0.169 Sum_probs=145.7
Q ss_pred HHHcCC---CCCCCCeeEEEecccccccCCCCCCChhHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCcee
Q 015997 63 YLASGC---KPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQF 138 (397)
Q Consensus 63 ~~~~~~---k~~~~~~iGvElE~~lVD~~t~~p~~~~~i~~lL~~l~~~~~~~~~~~~g~~i~l~~e~~~itlE-p~~qi 138 (397)
||++.. |...++++|||.|.+.||+ +|..+...- .++|... +. -..|+-| ..+|+
T Consensus 19 ~~~~~~~~~~~~~~~~~GIE~E~lRVd~-~G~La~tph-P~~LGs~-----------------lt--hp~IttDfsEsql 77 (525)
T 3nzt_A 19 YFQSNAMYDFKKINNLRGIERETLRVTD-CGNLATSNH-PDGLGHK-----------------LT--NNSITVDFSENLL 77 (525)
T ss_dssp -------CCCSSCCCEEEEEEEEEEEET-TSCBCCSCS-CGGGCCT-----------------TT--CSSEEESSBTTEE
T ss_pred eeeccccccccCCCCCcceEeeeeEECC-CCCcCCCCC-hHhhccC-----------------cc--CCCCCchhhhhHh
Confidence 777775 6788999999999999998 577443210 1223210 11 1256666 47999
Q ss_pred EeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-CCCCC---------CchHHH-HHHHhcccccc
Q 015997 139 ELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---------PKGRYE-IMRNYMPKVGS 207 (397)
Q Consensus 139 Elst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~-~~~i~---------p~~RY~-~m~~~~~~~g~ 207 (397)
|+.|+|+.++.++.++|.+..+.+...++ .+-.|++.++ |+...+ ++++. .|.+|| .|.++|+
T Consensus 78 E~iTp~~~s~~ea~~~L~~l~~~v~~~l~-~~E~LWp~Sm-Pl~~~~~~ipiA~yg~sn~g~~k~~YR~gL~~rYG---- 151 (525)
T 3nzt_A 78 ELITKPHDSIDKAIGELYQLSAFTLDNMH-SDEIILNTSM-PLSANDNDIQEADFGSSNSGRMKRVYRKGLSARYG---- 151 (525)
T ss_dssp EEECCCBSSHHHHHHHHHHHHHHHHHHSC-TTEEECCSSS-CCSCCGGGCCBCCCCSSHHHHHHHHHHHHHHHHHC----
T ss_pred hhcCCCCCCHHHHHHHHHHHHHHHHHhhC-CCCeEEeecC-CCCCCcCCCceeeccccccCcchHHHHHHHHHHhc----
Confidence 99999999999999999999999888764 4668888885 443332 36664 578998 6777663
Q ss_pred hhhhhhcccceeEeeeCCCCH--------------HHHHHHHHHHhhhHHHHHHHhhCCCCC-----CCCCCCCc-----
Q 015997 208 LGLDMMFRTCTVQVNLDFSSE--------------ADMIRKFRAGLALQPIATALFANSPFT-----EGKPNGYL----- 263 (397)
Q Consensus 208 ~g~~~m~~t~s~qVhl~~~~~--------------~~~~~~~n~~~~l~P~llALsANSPf~-----~G~~tg~~----- 263 (397)
...++ +||+|+|++++++ +...+..|-+..+.|++++||++||++ .|++|++.
T Consensus 152 -~~~q~--IsGiH~Nfsl~~~~~~~l~~~~~~~~s~~Y~~Lirnf~Ry~Wll~YLfGASP~~~~sF~~g~~~~l~~~~~~ 228 (525)
T 3nzt_A 152 -KIMQI--ISGIHYNFSFDKDLISNIATNKQVSISDIYFDVLNNYFEFMWLLPYLFGASPICAKTSVKNKPDYLSVLDDK 228 (525)
T ss_dssp -SGGGG--CCBEEEEEECCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTHHHHHHCCBCEEEGGGCSSCCTTCEECSSS
T ss_pred -hhhee--eeeEEEEecCCHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhhCCcccccccccCCCCcccccCCc
Confidence 23334 8999999999964 122356777789999999999999998 89988888
Q ss_pred --------cccHHH--HhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 015997 264 --------SMRSHI--WTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVP 302 (397)
Q Consensus 264 --------s~R~~i--w~~~~~~Rtg~~P~~f~~~~~~e~y~~~ll~~p 302 (397)
|.|.-. |...+ +++ ++..|.|+.+|.+.++.++++|
T Consensus 229 t~y~p~atSlR~S~~GY~N~~--q~~-l~i~ynsl~~Yv~~l~~av~tp 274 (525)
T 3nzt_A 229 FYVGEYATSLRMSDLGYTSPA--QKD-LAISYDNVKAYVKDLIQATDDT 274 (525)
T ss_dssp EEECTTCSBGGGSSCC--CHH--HHT-CCCCCSCHHHHHHHHHHHHHSB
T ss_pred cccCCCcceeeccccCCCCCc--ccC-CCCCCCCHHHHHHHHHHHHhCc
Confidence 888876 33443 345 4678999888888887777654
No 7
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A*
Probab=99.81 E-value=5.5e-19 Score=183.56 Aligned_cols=206 Identities=13% Similarity=0.102 Sum_probs=154.2
Q ss_pred HHHHHHHHcC-CCCCCCCeeEEEecccccccC----CCCCCChhHHHHHHHHHhhccccchhccCccccccccCCceeee
Q 015997 58 EDLVGYLASG-CKPKEKWRIGTEHEKFGFEFG----TLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISL 132 (397)
Q Consensus 58 ~~l~~~~~~~-~k~~~~~~iGvElE~~lVD~~----t~~p~~~~~i~~lL~~l~~~~~~~~~~~~g~~i~l~~e~~~itl 132 (397)
+.+...+++. .+.+.....|-|+|++||+.+ +.++...+ .++|+.+++... .. -.+....+.+|.+
T Consensus 28 ~Qfl~i~~~~k~r~~d~l~WGDEIEy~LV~~d~~~k~arlsl~~--~eIL~~L~~~~~--~~-~~~~~p~~~PEyG---- 98 (692)
T 3ig5_A 28 EQLLYIFQAAGKRDNDPLFWGDELEYMVVDFDDKERNSMLDVCH--DKILTELNMEDS--SL-CEANDVSFHPEYG---- 98 (692)
T ss_dssp HHHHHHHHHHTTCCCCCCEEEEEEEEEEEEEETTTTEEEECCSC--TTHHHHTTTTTH--HH-HHHTTEEEECCSB----
T ss_pred HHHHHHHHHhcccCCCcccccceeEEEEEEecCCCceeeecccH--HHHHHHHhhhhh--hc-ccCCCCcccchhh----
Confidence 3444444443 467788999999999999954 24577777 888988876310 00 0111234566666
Q ss_pred cCCceeEeecCccC----CHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEeccCCCCCCCC---C------
Q 015997 133 EPGGQFELSGAPLE----TLHQTCAEVNSHLYQVKAVAEEM-------------GIGFLGIGFQPKWGLK---D------ 186 (397)
Q Consensus 133 Ep~~qiElst~p~~----~l~~l~~el~~~l~~l~~aa~~~-------------G~~l~~~G~~P~~~~~---~------ 186 (397)
..+||. |++.+ ..+.++..++..+..++..+++. |..++.+|+-|..... .
T Consensus 99 --ryMlE~-TP~~Py~g~~~~~VE~nMr~RR~~a~~~l~~~~~~~~~~~~~~~~~~~~ltit~FPrLG~~dFt~p~~~~~ 175 (692)
T 3ig5_A 99 --RYMLEA-TPASPYLNYVGSYVEVNMQKRRAIAEYKLSEYARQDSKNNLHVGSRSVPLTLTVFPRMGCPDFINIKDPWN 175 (692)
T ss_dssp --TTEEEE-EESSCEESCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSTTEEEEEECCSSCTTTTSTTCBSSSCTTS
T ss_pred --ceeecc-CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhhhcccccccccccCCeeEEEeeccccCCCCCCCCCCCCCC
Confidence 477776 54443 13388899999999999999886 8899999999988632 1
Q ss_pred -------------CCCCCchHHHHHHHhcccc-c------c---------------------------------------
Q 015997 187 -------------IPVMPKGRYEIMRNYMPKV-G------S--------------------------------------- 207 (397)
Q Consensus 187 -------------~~i~p~~RY~~m~~~~~~~-g------~--------------------------------------- 207 (397)
..+++++||..|.+.+.+. | .
T Consensus 176 ~~~~~s~Slf~PDe~In~HpRF~tLT~NIR~RRG~KV~InIPif~D~nTp~~d~ti~~~~~f~~~~~~~~~aa~p~~IyM 255 (692)
T 3ig5_A 176 HKNAASRSLFLPDEVINRHVRFPNLTASIRTRRGEKVCMNVPMYKDIATPETDDSIYDRDWFLPEDKEAKLASKPGFIYM 255 (692)
T ss_dssp SCCTTTCCSSCCGGGBCSSTHHHHHHHHHHHHHSSCCCEEEEBCCCTTCCSSCTTCCCCCSSTTGGGTHHHHCCTTEEEE
T ss_pred CCCcccccccCCHhhcCCCcchHHHHHHHHHhcCCCceEeeccccCCCCCCCCcccchhhhCCccccccccccCCCeeEe
Confidence 3578999999998865321 1 0
Q ss_pred --hhhhhhcccceeEeeeCCCCHHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCC
Q 015997 208 --LGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA 278 (397)
Q Consensus 208 --~g~~~m~~t~s~qVhl~~~~~~~~~~~~n~~~~l~P~llALsANSPf~~G~~tg~~s~R~~iw~~~~~~Rt 278 (397)
.|..| ++|++|||+++++.+++...|+.+..+.|+++||+|||||+.|.. .|..+|..+++++.++|+
T Consensus 256 DaMgFGM--GccCLQvTfQa~ni~eAR~lYDqL~~l~PimLALSAASP~~kG~l-ad~DtRW~vIs~sVDdRt 325 (692)
T 3ig5_A 256 DSMGFGM--GCSCLQVTFQAPNINKARYLYDALVNFAPIMLAFSAAAPAFKGWL-ADQDVRWNVISGAVDDRT 325 (692)
T ss_dssp CSTHHHH--TSCBEEEEEEESSHHHHHHHHHHHTTHHHHHHHHTCCCCEETTEE-BSBCCSHHHHHHHTCCCC
T ss_pred ccccccc--cccceeeeeccCCHHHHHHHHHhhhhhHHHHHHHhhcChhhccee-cccchhHHHHHhhccCCC
Confidence 11122 388899999999999999999999999999999999999999986 599999999999998887
No 8
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=97.41 E-value=0.00074 Score=66.85 Aligned_cols=49 Identities=27% Similarity=0.308 Sum_probs=38.8
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCC
Q 015997 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 181 (397)
Q Consensus 129 ~itlEp~-~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~ 181 (397)
.+..|-+ +|.|++..+.. .-++.+.+...+..++++|+++|+... .+|+
T Consensus 188 ~~h~E~~pgQ~Ei~~~~~~-~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpK 237 (356)
T 2d3a_A 188 GINGEVMPGQWEFQVGPSV-GISSGDQVWVARYILERITEIAGVVVT---FDPK 237 (356)
T ss_dssp EEEECSSTTEEEEEEEEEE-THHHHHHHHHHHHHHHHHHHHHTEEEE---CCSC
T ss_pred EeecCcCCCceEEecCCCC-HHHHHHHHHHHHHHHHHHHHHhCCEEE---ECCC
Confidence 5566633 89999999954 556888999999999999999998665 4554
No 9
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.0028 Score=62.98 Aligned_cols=45 Identities=27% Similarity=0.261 Sum_probs=37.6
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 015997 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (397)
Q Consensus 129 ~itlEp~-~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~ 174 (397)
.+..|-+ +|.|++..++. .-++.+.+.-++..++++|+++|+...
T Consensus 189 ~~h~E~~pGQ~Ei~~~~~~-~l~aAD~~~~~K~~vk~vA~~~G~~AT 234 (370)
T 3fky_A 189 GINAEVMPSQWEFQVGPCT-GIDMGDQLWMARYFLHRVAEEFGIKIS 234 (370)
T ss_dssp EEEECSSTTEEEEEEEEEE-THHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred eeecCcCCCceEEecCCCC-HHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence 5556644 99999999985 557888999999999999999998765
No 10
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=97.29 E-value=0.0027 Score=63.39 Aligned_cols=49 Identities=22% Similarity=0.320 Sum_probs=38.6
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCC
Q 015997 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 181 (397)
Q Consensus 129 ~itlEp~-~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~ 181 (397)
.+..|-+ +|.|++..+...+ ++.+.+.-++..++++|+++|+... +.|+
T Consensus 211 ~~h~E~~pgQ~Ei~~~~~~~l-~aAD~~~~~k~~vk~vA~~~Gl~aT---FmpK 260 (384)
T 2ojw_A 211 GTNAEVMPAQWEFQIGPCEGI-SMGDHLWVARFILHRVCEDFGVIAT---FDPK 260 (384)
T ss_dssp EEEECSSTTEEEEEEEEEETT-HHHHHHHHHHHHHHHHHHHHTCEEE---CCSC
T ss_pred eeecCCCCcceEEEcCCCcHH-HHHHHHHHHHHHHHHHHHHhCCEEE---Eecc
Confidence 5566633 8999999996554 5688899999999999999998765 4554
No 11
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=97.23 E-value=0.0015 Score=66.99 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=63.8
Q ss_pred eeeec--CCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCchHHHHHHHhccccc
Q 015997 129 SISLE--PGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 206 (397)
Q Consensus 129 ~itlE--p~~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~~~~i~p~~RY~~m~~~~~~~g 206 (397)
.+..| |++|.||+..+ .+.-.+.+.+.-.+..++.+|+++|+... .+|+.-.
T Consensus 208 ~~h~E~apggQ~Ei~~~~-~~~l~aAD~~~~~k~~vk~vA~~hGl~at---FmpKP~~---------------------- 261 (468)
T 1f52_A 208 AHHHEVATAGQNEVATRF-NTMTKKADEIQIYKYVVHNVAHRFGKTAT---FMPKPMF---------------------- 261 (468)
T ss_dssp EEEECSSTTTEEEEEECC-EEHHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST----------------------
T ss_pred EeecCCCCceeEEEeccC-CCHHHHHHHHHHHHHHHHHHHHHhCCEEE---EeCCCCC----------------------
Confidence 45566 44599999988 56778899999999999999999998765 4554211
Q ss_pred chhhhhhcccceeEeeeCCCC--------------HHHHHHHHHHHhhhHHHHHHHhh
Q 015997 207 SLGLDMMFRTCTVQVNLDFSS--------------EADMIRKFRAGLALQPIATALFA 250 (397)
Q Consensus 207 ~~g~~~m~~t~s~qVhl~~~~--------------~~~~~~~~n~~~~l~P~llALsA 250 (397)
|. ..+|+|+|+.+-+ -+.+...+-.++..+|.+.|+++
T Consensus 262 --g~----~GSG~H~h~Sl~~~g~Nlf~~~~~~~ls~~~~~~iaGll~h~~~l~a~~a 313 (468)
T 1f52_A 262 --GD----NGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALAN 313 (468)
T ss_dssp --TS----CCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHS
T ss_pred --CC----CCCCcceeeccccCCCcccCCCCcchHHHHHHHHHHHHHHHHHHhHhHhc
Confidence 00 1456666654321 02455667777889999999966
No 12
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=97.18 E-value=0.0029 Score=64.39 Aligned_cols=145 Identities=21% Similarity=0.125 Sum_probs=87.3
Q ss_pred HHHHHHHHHc-CCCCCCCCeeEEEecccccccCCCCCCChh------H----HHHHHHHHhhccccchhccCcccccccc
Q 015997 57 KEDLVGYLAS-GCKPKEKWRIGTEHEKFGFEFGTLHPMKYE------Q----IAELLNSIAERFDWEKVMEGDYIIGLKQ 125 (397)
Q Consensus 57 ~~~l~~~~~~-~~k~~~~~~iGvElE~~lVD~~t~~p~~~~------~----i~~lL~~l~~~~~~~~~~~~g~~i~l~~ 125 (397)
++.+++.+++ |. ...+|+|+||+|++........+. . +.++...+.. . |+.-
T Consensus 112 L~r~~~~~~~~G~----~~~~g~E~EF~l~~~~p~~~~~~y~~~~~~~~~~~~~~i~~~l~~-~------------Gi~v 174 (443)
T 4hpp_A 112 LRAEVERYRDSGL----QVIAAFEHEFSLLGLPGERPAAAFSLQAQRAAGQFPGWLVSALAQ-A------------GTEP 174 (443)
T ss_dssp HHHHHHHHHHTTE----EEEEEEEEEEEEECCCSSSCCCTTCHHHHHHTTTHHHHHHHHHHH-T------------TCCE
T ss_pred HHHHHHHHHHcCC----eEEEEeeeEEEEeccccCCCCccCCCCcccchHHHHHHHHHHHHH-C------------CCCe
Confidence 4444455542 33 469999999999974211111111 1 2333333322 1 2222
Q ss_pred CCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCchHHHHHHHhccc
Q 015997 126 GKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPK 204 (397)
Q Consensus 126 e~~~itlEp~-~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~~~~i~p~~RY~~m~~~~~~ 204 (397)
+ .+..|-+ +|.|++..+.. .-++.+.+...+..++++|+++|+... ++|+.-.
T Consensus 175 e--~~h~E~~pgQ~Ei~~~~~~-~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpKP~~-------------------- 228 (443)
T 4hpp_A 175 E--MFLPEYGQRQYEVTCRPAQ-GVAAADRAVNVREVTREVARQMGLRTC---FAPLPAP-------------------- 228 (443)
T ss_dssp E--EEEECSSTTEEEEEECCEE-THHHHHHHHHHHHHHHHHHHHHTCEEE---CSSSSST--------------------
T ss_pred E--EeecCCCCCceEEEecCCc-HHHHHHHHHHHHHHHHHHHHHhCCEEE---EecccCC--------------------
Confidence 2 4556644 99999999964 567888899999999999999998765 3443210
Q ss_pred ccchhhhhhcccceeEeeeCCCCH----------------HHHHHHHHHHhhhHHHHHHHhhCC
Q 015997 205 VGSLGLDMMFRTCTVQVNLDFSSE----------------ADMIRKFRAGLALQPIATALFANS 252 (397)
Q Consensus 205 ~g~~g~~~m~~t~s~qVhl~~~~~----------------~~~~~~~n~~~~l~P~llALsANS 252 (397)
| . ..+|+|+|+..-+. +.+...+-.++..+|.+.|+++-+
T Consensus 229 ----~--~--~GsG~H~h~Sl~~~~G~n~f~~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~ 284 (443)
T 4hpp_A 229 ----G--A--VTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPT 284 (443)
T ss_dssp ----T--C--CCCCEEEEEEEEETTSCBSSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred ----C--C--CcccceeeeeeecCCCCccccCCCCccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0 0 14566666654210 124456667778889999988743
No 13
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=97.03 E-value=0.0067 Score=61.69 Aligned_cols=99 Identities=17% Similarity=0.267 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCCCCCC-CeeEEEecccccccCC-CC---------------CCChh--HHHHHHHHHhhccccchhccC
Q 015997 57 KEDLVGYLASGCKPKEK-WRIGTEHEKFGFEFGT-LH---------------PMKYE--QIAELLNSIAERFDWEKVMEG 117 (397)
Q Consensus 57 ~~~l~~~~~~~~k~~~~-~~iGvElE~~lVD~~t-~~---------------p~~~~--~i~~lL~~l~~~~~~~~~~~~ 117 (397)
++..++.+++ .+-. ..+|.|+||+|++.+. +. +.+.. -..++...+.. .
T Consensus 112 Lkr~~~~~~~---~G~~~~~~g~E~EF~l~~~~~~g~~~~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~-~-------- 179 (444)
T 3qaj_A 112 LKRILKEMED---LGFSDFNLGPEPEFFLFKLDEKGEPTLELNDKGGYFDLAPTDLGENCRRDIVLELEE-M-------- 179 (444)
T ss_dssp HHHHHHHHHT---TTCCEEEEEEEECEEEEEECSSSCEEEEESCCCCTTCCTTTSCCTTHHHHHHHHHHT-T--------
T ss_pred HHHHHHHHHH---cCCCeeeEEeceEEEEEecCCCCCCCCcCcCCCCccccCCCcchHHHHHHHHHHHHH-C--------
Confidence 4445555543 1224 5799999999998532 21 11111 13444444432 1
Q ss_pred ccccccccCCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 015997 118 DYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (397)
Q Consensus 118 g~~i~l~~e~~~itlEp~-~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~ 174 (397)
|+.-| .+..|-+ +|.|++..+. +.-++.+.+.-.+..++++|+++|+...
T Consensus 180 ----Gi~ve--~~h~E~~pGQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aT 230 (444)
T 3qaj_A 180 ----GFEIE--ASHHEVAPGQHEIDFKYA-GAVRSCDDIQTFKLVVKTIARKHGLHAT 230 (444)
T ss_dssp ----TCCEE--EEEECSSTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred ----CCCeE--EeEcCcCCCcEEEecCCC-hHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 22222 4556644 9999999986 5678889999999999999999997655
No 14
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=96.76 E-value=0.013 Score=60.05 Aligned_cols=90 Identities=20% Similarity=0.097 Sum_probs=62.9
Q ss_pred eeeecCC--ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCchHHHHHHHhccccc
Q 015997 129 SISLEPG--GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 206 (397)
Q Consensus 129 ~itlEp~--~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~~~~i~p~~RY~~m~~~~~~~g 206 (397)
.+..|-+ +|.|++..+. +.-++.+.+.-++..++++|+++|+... ++|+.-. |
T Consensus 211 ~~h~E~~~pGQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpKP~~---------------------~ 265 (473)
T 3ng0_A 211 KHHHEVASGGQNELGIKFD-KLVNSADNLMIYKYVIKNVAKKYGKTVT---FMPKPIF---------------------N 265 (473)
T ss_dssp EEEECSSTTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST---------------------T
T ss_pred EeecCcCCCCceEEEccCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEE---EcCcccC---------------------C
Confidence 5567744 8999999985 5778889999999999999999998765 4453210 0
Q ss_pred chhhhhhcccceeEeeeCCC-CH-------------HHHHHHHHHHhhhHHHHHHHhh
Q 015997 207 SLGLDMMFRTCTVQVNLDFS-SE-------------ADMIRKFRAGLALQPIATALFA 250 (397)
Q Consensus 207 ~~g~~~m~~t~s~qVhl~~~-~~-------------~~~~~~~n~~~~l~P~llALsA 250 (397)
. ..+|+|+|+.+- ++ +.+...+-.++..+|.+.|+++
T Consensus 266 ---~----~GSG~H~H~Sl~~~g~n~F~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~ 316 (473)
T 3ng0_A 266 ---D----NGSGMHVHQSLWKDGQPLFAGDKYAGFSQMGLWYIGGILKHAPALLAFTN 316 (473)
T ss_dssp ---S----CCCCEEEEEEEEETTEETTBSSSGGGBCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---C----CCCeeEEEEeeccCCccccCCCCccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 0 135566665431 10 2345566777888999999985
No 15
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=96.71 E-value=0.024 Score=58.24 Aligned_cols=90 Identities=20% Similarity=0.140 Sum_probs=62.5
Q ss_pred eeeec--CCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCchHHHHHHHhccccc
Q 015997 129 SISLE--PGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 206 (397)
Q Consensus 129 ~itlE--p~~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~~~~~~~~i~p~~RY~~m~~~~~~~g 206 (397)
.+..| |.+|.|++..+. +.-++.+.+.-.+..++++|+++|+... +.|+.-.
T Consensus 223 ~~h~E~gp~GQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpKP~~---------------------- 276 (486)
T 4acf_A 223 KGHHEVGSGGQAEINYQFN-SLLHAADDMQLYKYIIKNTAWQNGKTVT---FMPKPLF---------------------- 276 (486)
T ss_dssp EEEECSSTTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST----------------------
T ss_pred eeeeeeeccceeEEeccCc-chhhhhhHHHHHHHHHHHHHHHcCCeEE---Eeecccc----------------------
Confidence 45566 348999999886 4678889999999999999999999765 3443210
Q ss_pred chhhhhhcccceeEeeeCCCC--------H-------HHHHHHHHHHhhhHHHHHHHhh
Q 015997 207 SLGLDMMFRTCTVQVNLDFSS--------E-------ADMIRKFRAGLALQPIATALFA 250 (397)
Q Consensus 207 ~~g~~~m~~t~s~qVhl~~~~--------~-------~~~~~~~n~~~~l~P~llALsA 250 (397)
| . ..+|+|+|+..-+ + +.+...+..++..+|.+.|+++
T Consensus 277 --~--~--~GsG~H~H~Sl~~~g~n~f~~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~ 329 (486)
T 4acf_A 277 --G--D--NGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTN 329 (486)
T ss_dssp --T--S--CCCCEEEEEEEEETTEESSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred --C--C--CcccceeeeeeccCCCccccccccccccchHHHHHHHHHHHhhhcceeeec
Confidence 0 1 1456666665421 0 2344566777788898888876
No 16
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=96.30 E-value=0.015 Score=61.93 Aligned_cols=49 Identities=20% Similarity=0.161 Sum_probs=38.9
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCC
Q 015997 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 181 (397)
Q Consensus 129 ~itlEp~-~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~~~G~~P~ 181 (397)
.+..|.+ +|.|++..+. +.-.+.+.+.-.+..++.+|+++|+... .+|.
T Consensus 282 ~~H~EvaPGQ~EI~~~~~-~al~AAD~~~l~K~vvK~VA~~hGl~AT---FMPK 331 (729)
T 3o6x_A 282 TRHNEVAPNQFELAPIFE-NCNLANDHNQLVMDLMKRIARKHHFAVL---FHEK 331 (729)
T ss_dssp EECBCSSTTEECCEECCE-EHHHHHHHHHHHHHHHHHHHHHTTEEEE---CSSC
T ss_pred EeecCCCCCceEeccCCC-hHHHHHHHHHHHHHHHHHHHHHhCCEEE---Eecc
Confidence 3444533 8999999986 5778889999999999999999998765 4554
No 17
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=92.21 E-value=0.029 Score=56.64 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=61.4
Q ss_pred HHHHHHHHHc-CCCCCCCCeeEEEecccccccCC---CCCCCh-----hHHHHHHHHHhhccccchhccCccccccccCC
Q 015997 57 KEDLVGYLAS-GCKPKEKWRIGTEHEKFGFEFGT---LHPMKY-----EQIAELLNSIAERFDWEKVMEGDYIIGLKQGK 127 (397)
Q Consensus 57 ~~~l~~~~~~-~~k~~~~~~iGvElE~~lVD~~t---~~p~~~-----~~i~~lL~~l~~~~~~~~~~~~g~~i~l~~e~ 127 (397)
++.+.+.+++ |..+ ...+|+|+||+|+|... +.|..+ ....++++.+. ..=. .|+.-+
T Consensus 103 Lk~~~~~~~~~G~~d--~~~~g~E~EF~l~~~~~~~~~~p~y~~~~~~~~~~~~~~~i~---------~~l~-~Gi~ve- 169 (421)
T 2j9i_A 103 ARAALAQLQAAGAAA--GLLSAFIADFCIFGVPEVINSKTISFPASTTAAAADQPQEAA---------AGGA-AGAAAG- 169 (421)
T ss_dssp HHHHHHHHHHTTSCS--EECCEECCCCEEESCCEEEECSSCEEEECCCTTCTTGGGSCC---------TTCC-CSCCCB-
T ss_pred HHHHHHHHHhcCCcc--CceEEeeeEEEEEecCCCCCCCCCcCCCCcccchhHHHHHHH---------HHHh-CCCCeE-
Confidence 4444555543 3221 46899999999998642 222100 00011111111 1111 233333
Q ss_pred ceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 015997 128 QSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (397)
Q Consensus 128 ~~itlEp~-~qiElst~p~~~l~~l~~el~~~l~~l~~aa~~~G~~l~ 174 (397)
.+..|-+ +|.|++..+..+.-++.+.+.-.+..++++|+++|+...
T Consensus 170 -~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~at 216 (421)
T 2j9i_A 170 -AAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIAS 216 (421)
T ss_dssp -TTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEE
T ss_pred -EeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 3445533 899999988763567888889999999999999998765
No 18
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=38.77 E-value=6.5 Score=22.96 Aligned_cols=14 Identities=21% Similarity=0.230 Sum_probs=11.6
Q ss_pred ccCCCCCCCccCee
Q 015997 345 LTTIFPEVRLKRYL 358 (397)
Q Consensus 345 lstifp~vR~r~~I 358 (397)
.|.+|-|||+.+++
T Consensus 9 rsslflwvr~ng~~ 22 (26)
T 2bp3_S 9 RSSLFLWVRPNGRV 22 (26)
T ss_pred hheEEEEEccCCee
Confidence 57788899999875
No 19
>4b0t_A PUP--protein ligase; pupylation, depupylation, prokaryotic ubiquitin-like protein, proteasome; HET: ADP; 2.16A {Corynebacterium glutamicum}
Probab=31.54 E-value=41 Score=34.14 Aligned_cols=74 Identities=18% Similarity=0.066 Sum_probs=42.7
Q ss_pred CCeeEEEecccccccCC-CCCCChhHHHHHH-HHHhhccccchhccCccccccccCCceeeecCCceeEeecCccCCHHH
Q 015997 73 KWRIGTEHEKFGFEFGT-LHPMKYEQIAELL-NSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQ 150 (397)
Q Consensus 73 ~~~iGvElE~~lVD~~t-~~p~~~~~i~~lL-~~l~~~~~~~~~~~~g~~i~l~~e~~~itlEp~~qiElst~p~~~l~~ 150 (397)
..-+|+|-||=|.-... .++....++...+ ...-+ | .+.--.+.++|+++=++.++-.|++|+-|.++.+
T Consensus 10 RRI~GiETEYGIs~~~~~~r~~~~d~~ar~lf~p~v~---~-----~r~~Nv~l~NGaRlYvDvgaHPEYstpEc~~~~d 81 (493)
T 4b0t_A 10 RRIMGIETEYGLTFVDGDSKKLRPDEIARRMFRPIVE---K-----YSSSNIFIPNGSRLYLDVGSHPEYATAECDNLTQ 81 (493)
T ss_dssp SCCEEEEEECEEEEEC------CTHHHHHHHHHHHHH---H-----HSCSEEECTTSCEEECCTTSCCEEECCCBSSHHH
T ss_pred CceeeecccceEeccCCCCCCCCHHHHHHHHhccccc---c-----ccccceecCCcCeEeeecCCCccccCcccCCHHH
Confidence 35689999987653322 2333333222222 21111 1 0111134667889999988889999999999888
Q ss_pred HHHH
Q 015997 151 TCAE 154 (397)
Q Consensus 151 l~~e 154 (397)
+...
T Consensus 82 ~v~~ 85 (493)
T 4b0t_A 82 LINF 85 (493)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
Done!