Query 016001
Match_columns 397
No_of_seqs 162 out of 415
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 06:12:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016001.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016001hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eyha_ a.118.9.1 (A:) Epsin 1 100.0 1.5E-45 1.1E-49 319.4 16.1 143 23-165 1-143 (144)
2 d1hx8a2 a.118.9.3 (A:22-161) A 99.9 2.2E-23 1.6E-27 179.1 11.3 120 28-155 3-134 (140)
3 d1hf8a2 a.118.9.3 (A:19-149) C 99.9 1.6E-22 1.1E-26 171.5 10.6 120 26-153 2-122 (131)
4 d1elka_ a.118.9.2 (A:) Tom1 pr 97.8 9.4E-05 6.8E-09 63.0 11.8 114 26-143 11-125 (153)
5 d1ujka_ a.118.9.2 (A:) ADP-rib 97.6 0.00024 1.8E-08 60.0 12.0 113 23-142 4-121 (145)
6 d1mhqa_ a.118.9.2 (A:) ADP-rib 97.6 0.00045 3.3E-08 58.0 12.4 110 28-142 2-114 (143)
7 d1dvpa1 a.118.9.2 (A:1-145) Hr 97.3 0.001 7.3E-08 55.7 11.5 108 25-142 3-113 (145)
8 d1juqa_ a.118.9.2 (A:) ADP-rib 97.3 0.0011 8.1E-08 56.1 11.4 113 27-144 2-117 (151)
9 d1szaa_ a.118.9.4 (A:) PCF11 p 60.9 22 0.0016 28.3 9.0 100 45-156 27-136 (144)
10 d1ibrb_ a.118.1.1 (B:) Importi 28.7 1.3E+02 0.0093 24.7 9.0 68 32-99 94-163 (458)
11 d1lnwa_ a.4.5.28 (A:) MexR rep 28.1 43 0.0031 25.5 5.3 68 1-75 6-77 (141)
12 d1yvra1 a.118.25.1 (A:5-363) 6 27.3 61 0.0045 29.5 7.1 132 12-152 142-314 (359)
13 d2ijqa1 a.246.2.1 (A:14-158) H 25.7 74 0.0054 25.8 6.6 84 57-149 32-120 (145)
14 d1rqja_ a.128.1.1 (A:) Farnesy 25.7 1.2E+02 0.0085 26.2 8.5 29 72-103 40-68 (299)
15 d1ci4a_ a.60.5.1 (A:) Barrier- 21.2 22 0.0016 27.4 2.1 46 57-107 19-66 (89)
No 1
>d1eyha_ a.118.9.1 (A:) Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00 E-value=1.5e-45 Score=319.40 Aligned_cols=143 Identities=41% Similarity=0.753 Sum_probs=140.6
Q ss_pred cCCCHHHHHHHHhhcCCCCCCCHHHHHHHHHHcCCchhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHH
Q 016001 23 LKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVD 102 (397)
Q Consensus 23 ~nySe~E~KVrEATsNDpWGPs~slM~EIA~aTyn~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVd 102 (397)
.||||+|++|++|||+|+|||++++|++|+++||++..|..||.+||+||.+++++||+|||||+||+|||+||+++||.
T Consensus 1 ~n~s~~e~~v~~ATs~d~~~p~~k~~~~I~~~t~~~~~~~~i~~~L~kRl~~~~k~Wrvv~K~L~ll~~Ll~~G~~~~v~ 80 (144)
T d1eyha_ 1 HNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQ 80 (144)
T ss_dssp CCCCHHHHHHHHHTCSSSSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCCHHHHHHHHHHhcChhhHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHcCCHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhcccceeeeCCCCcchhhHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcccccc
Q 016001 103 DIIEHTFQISSLSSFEYVEPSGKDMGINVRKKAENIVALLNNKDKIQEVRNKASANREKYFGL 165 (397)
Q Consensus 103 d~r~hi~~I~~L~~FqYiD~~GkDqGinVReKAk~IveLL~D~e~LreER~KAkk~R~Ky~G~ 165 (397)
+++.|++.|+.|..|+|+|++|+|+|++||+||+.|++||.|+++|++||.+|+++|+||.++
T Consensus 81 ~~~~~~~~i~~l~~f~~~d~~g~d~g~~VR~kA~~l~~Ll~d~~~L~~eR~~a~~~r~k~~~~ 143 (144)
T d1eyha_ 81 QCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQLVALLRDEDRLREERAHALKTKEKLAQT 143 (144)
T ss_dssp HHHHTHHHHHGGGGCCCBCTTSCBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhHHHHHhhhcCcccCccccchhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999875
No 2
>d1hx8a2 a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.89 E-value=2.2e-23 Score=179.08 Aligned_cols=120 Identities=24% Similarity=0.328 Sum_probs=101.9
Q ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHcCCch-hHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHHHHHh
Q 016001 28 IEQKVLDATDNEPWGPHGTALAEIAQATKKFS-ECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDIIE 106 (397)
Q Consensus 28 ~E~KVrEATsNDpWGPs~slM~EIA~aTyn~~-~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd~r~ 106 (397)
+|+.|++|||+|+|||..+.|.+|+.+||++. .+..||.+||+||.+ ++|+++||||+||+|||++|+++|+++++.
T Consensus 3 l~~aV~kAT~~~~~~Pk~K~v~~i~~~t~~~~~~~~~i~~~L~~Rl~~--~~w~v~~K~L~llh~ll~~G~~~~~~~~~~ 80 (140)
T d1hx8a2 3 LAKSVCKATTEECIGPKKKHLDYLVHCANEPNVSIPHLANLLIERSQN--ANWVVVYKSLITTHHLMAYGNERFMQYLAS 80 (140)
T ss_dssp HHHHHHHHSCSSSSCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTC--SSHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccHHHHHHHHHHHHcC--ccHHHHHHHHHHHHHHHhcCCHHHHHHHHh
Confidence 68999999999999999999999999999986 589999999999964 689999999999999999999999999988
Q ss_pred hhhhhh--cccceeeeC---------CCCcchhhHHHHHHHHHHHhhcChHHHHHHHHHH
Q 016001 107 HTFQIS--SLSSFEYVE---------PSGKDMGINVRKKAENIVALLNNKDKIQEVRNKA 155 (397)
Q Consensus 107 hi~~I~--~L~~FqYiD---------~~GkDqGinVReKAk~IveLL~D~e~LreER~KA 155 (397)
+...+. .++++.+.. +.+.|+|..||..|+-| +|+|+++|..+
T Consensus 81 ~~~~~~l~~f~d~~~~~~~~~~~~~~~~~~~~~~~Ir~Ya~yL------~eRl~~~R~~~ 134 (140)
T d1hx8a2 81 SNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYL------NEKSLSYRAMA 134 (140)
T ss_dssp TTCCCCCTTCCCCCC---CCSSCCCTTHHHHHHHHHHHHHHHH------HHHHHHHHHHS
T ss_pred CCCcccccccccccccccccccccccccccchhHHHHHHHHHH------HHHHHHHHHhc
Confidence 876654 344443332 23358999999999988 67888888753
No 3
>d1hf8a2 a.118.9.3 (A:19-149) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.87 E-value=1.6e-22 Score=171.48 Aligned_cols=120 Identities=21% Similarity=0.334 Sum_probs=106.0
Q ss_pred CHHHHHHHHhhcCCCCCCCHHHHHHHHHHcCCchh-HHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHHHH
Q 016001 26 PEIEQKVLDATDNEPWGPHGTALAEIAQATKKFSE-CQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDI 104 (397)
Q Consensus 26 Se~E~KVrEATsNDpWGPs~slM~EIA~aTyn~~~-y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd~ 104 (397)
+++|+.|.+|||+++|||..+.|.+|+++|++.+. +..||..||+||.++ +|+++||+|+||+||++||++.|++++
T Consensus 2 s~l~~~V~kATs~~~~~P~~k~v~~i~~~t~~~~~~~~~~~~~L~~Rl~~~--~w~v~~K~L~llh~ll~~G~~~~~~~~ 79 (131)
T d1hf8a2 2 SAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS--SWVVVFKSLITTHHLMVYGNERFIQYL 79 (131)
T ss_dssp HHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTCTTSCHHHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 57899999999999999999999999999999875 799999999999875 799999999999999999999999999
Q ss_pred HhhhhhhhcccceeeeCCCCcchhhHHHHHHHHHHHhhcChHHHHHHHH
Q 016001 105 IEHTFQISSLSSFEYVEPSGKDMGINVRKKAENIVALLNNKDKIQEVRN 153 (397)
Q Consensus 105 r~hi~~I~~L~~FqYiD~~GkDqGinVReKAk~IveLL~D~e~LreER~ 153 (397)
+.+..+|.....+.+.+..|.|+|..||..|+-| +++|+..|+
T Consensus 80 ~~~~~~l~l~~~~~~~~~~~~~~~~~Ir~Ya~yL------~er~~~~r~ 122 (131)
T d1hf8a2 80 ASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYL------NEKAVSYRQ 122 (131)
T ss_dssp HHSSCCCCCTTCCCCSSHHHHHHHHHHHHHHHHH------HHHHHHHHH
T ss_pred HhCcchhhhhhccccCCCCcCcccHHHHHHHHHH------HHHHHHHHH
Confidence 9998888754445666667889999999999988 455555554
No 4
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.80 E-value=9.4e-05 Score=63.01 Aligned_cols=114 Identities=18% Similarity=0.124 Sum_probs=83.2
Q ss_pred CHHHHHHHHhhcCCCCCCCHHHHHHHHHHcC-CchhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHHHH
Q 016001 26 PEIEQKVLDATDNEPWGPHGTALAEIAQATK-KFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDI 104 (397)
Q Consensus 26 Se~E~KVrEATsNDpWGPs~slM~EIA~aTy-n~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd~ 104 (397)
|+++.+|.+||+..--.|.-..+-+||+.-- +...-.+.+..|.|||.. .+++...+-||.|||.|++|+..+|-.++
T Consensus 11 t~~~~~vekAT~~~l~~~dw~~il~icD~In~~~~~~k~a~ral~krL~~-~~n~~v~l~aL~LLe~~vkNCG~~fh~ev 89 (153)
T d1elka_ 11 SPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVG-NKNFHEVMLALTVLETCVKNCGHRFHVLV 89 (153)
T ss_dssp SHHHHHHHHHTCTTCSSCCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred ChHHHHHHHHcCCCCCcccHHHHHHHHHHHhCCCcCHHHHHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 7899999999998777777777888877642 233457799999999965 35898999999999999999999988877
Q ss_pred HhhhhhhhcccceeeeCCCCcchhhHHHHHHHHHHHhhc
Q 016001 105 IEHTFQISSLSSFEYVEPSGKDMGINVRKKAENIVALLN 143 (397)
Q Consensus 105 r~hi~~I~~L~~FqYiD~~GkDqGinVReKAk~IveLL~ 143 (397)
-+--++-+.|...-.. +.+.-..||+|+.+|+....
T Consensus 90 as~~Fl~~ll~~~~~~---~~~~~~~Vk~kil~li~~W~ 125 (153)
T d1elka_ 90 ASQDFVESVLVRTILP---KNNPPTIVHDKVLNLIQSWA 125 (153)
T ss_dssp TSHHHHHHHTHHHHST---TTCCCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcc---CCCCcHHHHHHHHHHHHHHH
Confidence 5544433323222111 11233469999999998773
No 5
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=0.00024 Score=59.98 Aligned_cols=113 Identities=13% Similarity=0.170 Sum_probs=82.2
Q ss_pred cCCCHHHHHHHHhhcCCCCCCCHHHHHHHHHHcCCc-hhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHH
Q 016001 23 LKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKF-SECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAV 101 (397)
Q Consensus 23 ~nySe~E~KVrEATsNDpWGPs~slM~EIA~aTyn~-~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvV 101 (397)
+.-+++|..|..||+.-.-.|.-..+-+|++.--.. ..-...+..|.|||... +-...+-||.|||+|++|+.++|-
T Consensus 4 ~~~~~~e~~iekAT~~~l~~~dw~~ileicD~I~~~~~~~k~a~r~l~krl~~~--~~~~~l~aL~LLe~~vkNCG~~f~ 81 (145)
T d1ujka_ 4 MEPETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSP--QEWEAIQALTVLETCMKSCGKRFH 81 (145)
T ss_dssp GSTTSHHHHHHHHTCTTCSSCCHHHHHHHHHHHTSSTTHHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHTSCCHHHH
T ss_pred CCcchHHHHHHHHcCCCCCCcCHHHHHHHHHHHhCCCccHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHhHHHH
Confidence 456889999999999877788888999999886443 33567999999999764 556777899999999999999887
Q ss_pred HHHHhhhh--hhhcccceeeeCCC--CcchhhHHHHHHHHHHHhh
Q 016001 102 DDIIEHTF--QISSLSSFEYVEPS--GKDMGINVRKKAENIVALL 142 (397)
Q Consensus 102 dd~r~hi~--~I~~L~~FqYiD~~--GkDqGinVReKAk~IveLL 142 (397)
.++-+--+ .+..|- .++ |...-..||+|+-+++..-
T Consensus 82 ~evas~~Fl~~L~kli-----~~k~~~~~~~~~Vk~kil~li~~W 121 (145)
T d1ujka_ 82 DEVGKFRFLNELIKVV-----SPKYLGSRTSEKVKNKILELLYSW 121 (145)
T ss_dssp HHHTSHHHHHHHHHHH-----CTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHH-----hhccCCCCCcHHHHHHHHHHHHHH
Confidence 77643322 222211 111 2233458999988888764
No 6
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.56 E-value=0.00045 Score=58.04 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=80.4
Q ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHcCC-chhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHHHHHh
Q 016001 28 IEQKVLDATDNEPWGPHGTALAEIAQATKK-FSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDIIE 106 (397)
Q Consensus 28 ~E~KVrEATsNDpWGPs~slM~EIA~aTyn-~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd~r~ 106 (397)
+|.+|.+||+...--|.-..+-+|++.--. ...-.+.+..|.|||... +-...+-||.|||+|++|+.++|..++-.
T Consensus 2 le~liekAT~~~~~~~dw~~il~icD~I~~~~~~~k~a~ral~krl~~~--n~~~~l~aL~LLe~~vkNcG~~fh~evas 79 (143)
T d1mhqa_ 2 LELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSP--QEKEALYALTVLEMCMNHCGEKFHSEVAK 79 (143)
T ss_dssp HHHHHHHHHCTTCSSCCHHHHHHHHHHHHHSSHHHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHHSCHHHHHHHTS
T ss_pred HHHHHHHHcCCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHcCHHHHHHHhh
Confidence 688999999987777888888888876533 334567999999999764 56788999999999999999999888743
Q ss_pred h--hhhhhcccceeeeCCCCcchhhHHHHHHHHHHHhh
Q 016001 107 H--TFQISSLSSFEYVEPSGKDMGINVRKKAENIVALL 142 (397)
Q Consensus 107 h--i~~I~~L~~FqYiD~~GkDqGinVReKAk~IveLL 142 (397)
- +..+..|-.-.| .|.-....||+|+-+++.-.
T Consensus 80 k~Fl~~l~~li~~k~---~~~~~~~~Vk~kil~li~~W 114 (143)
T d1mhqa_ 80 FRFLNELIKVLSPKY---LGSWATGKVKGRVIEILFSW 114 (143)
T ss_dssp HHHHHHHHHTTCCST---TSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccc---CCCCCCHHHHHHHHHHHHHH
Confidence 3 333333322222 23334568999988887644
No 7
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.32 E-value=0.001 Score=55.71 Aligned_cols=108 Identities=15% Similarity=0.151 Sum_probs=80.6
Q ss_pred CCHHHHHHHHhhcCCCCCCCHHHHHHHHHHcC-CchhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHHH
Q 016001 25 VPEIEQKVLDATDNEPWGPHGTALAEIAQATK-KFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDD 103 (397)
Q Consensus 25 ySe~E~KVrEATsNDpWGPs~slM~EIA~aTy-n~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd 103 (397)
.|+.|..|..||+...--|.-.++-+|++.-- +...-.+.+..|.|||... +-...+-||.|||.|++|+...|-.+
T Consensus 3 ~s~~~~~iekAT~~~~~~~dw~~il~icD~I~~~~~~~k~a~ral~krl~~~--n~~v~l~aL~LLd~~vkNcG~~f~~~ 80 (145)
T d1dvpa1 3 RSSFCKNLENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNSP--NPHSSCYSLLVLESIVKNCGAPVHEE 80 (145)
T ss_dssp CSHHHHHHHHHHCTTCSSCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred cchHHHHHHHHcCcCCCCCCHHHHHHHHHHHhCCCccHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHccchHHHHH
Confidence 47899999999998888888889999888753 3344678999999999764 67788999999999999998887776
Q ss_pred HHh--hhhhhhcccceeeeCCCCcchhhHHHHHHHHHHHhh
Q 016001 104 IIE--HTFQISSLSSFEYVEPSGKDMGINVRKKAENIVALL 142 (397)
Q Consensus 104 ~r~--hi~~I~~L~~FqYiD~~GkDqGinVReKAk~IveLL 142 (397)
+-+ -+..|..+ .+. ..-..||+|+-+++...
T Consensus 81 i~s~~fl~~l~~l-----~~~---~~~~~Vk~kil~li~~W 113 (145)
T d1dvpa1 81 VFTKENCEMFSSF-----LES---TPHENVRQKMLELVQTW 113 (145)
T ss_dssp HSSHHHHHHHHHH-----HHH---CSCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHH-----hcC---CCCHHHHHHHHHHHHHH
Confidence 633 22222222 111 11247999998888774
No 8
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.28 E-value=0.0011 Score=56.11 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=76.0
Q ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHcCC-chhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHHHHH
Q 016001 27 EIEQKVLDATDNEPWGPHGTALAEIAQATKK-FSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDII 105 (397)
Q Consensus 27 e~E~KVrEATsNDpWGPs~slM~EIA~aTyn-~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd~r 105 (397)
.+|.+|..||+...--|.-..+-+|++.--. .+.-...+..|.|||... +-..++-||.|||+|++|+..+|-.++-
T Consensus 2 sle~~i~kAT~~~l~~~dw~~ileicD~In~~~~~~k~a~rai~krl~~~--~~~~~l~aL~LLe~~vkNCG~~F~~eva 79 (151)
T d1juqa_ 2 SLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSP--QEWEALQALTVLEACMKNCGRRFHNEVG 79 (151)
T ss_dssp CHHHHHHHHTCTTCSSCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHHSHHHHHHHHT
T ss_pred cHHHHHHHHcCCCCCCcCHHHHHHHHHHHhcCCccHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHccHHHHHHHh
Confidence 3688999999965555555666666655322 234678999999999753 4457788999999999999988877773
Q ss_pred hh--hhhhhcccceeeeCCCCcchhhHHHHHHHHHHHhhcC
Q 016001 106 EH--TFQISSLSSFEYVEPSGKDMGINVRKKAENIVALLNN 144 (397)
Q Consensus 106 ~h--i~~I~~L~~FqYiD~~GkDqGinVReKAk~IveLL~D 144 (397)
.- +..+..|-.-.+. +.-.-..|++|+-+++....+
T Consensus 80 sk~Fl~~l~kli~~k~~---~~~~~~~Vk~kil~ll~~Wa~ 117 (151)
T d1juqa_ 80 KFRFLNELIKVVSPKYL---GDRVSEKVKTKVIELLYSWTM 117 (151)
T ss_dssp SHHHHHHHHHHHCCCCC---CTTSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCC---CCcccHHHHHHHHHHHHHHHH
Confidence 33 2223322222221 222345799999888887643
No 9
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.87 E-value=22 Score=28.27 Aligned_cols=100 Identities=14% Similarity=0.144 Sum_probs=69.7
Q ss_pred HHHHHHHHHHcCCchhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHhHHHHHHhhhhhhhcccceeeeCCCC
Q 016001 45 GTALAEIAQATKKFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDIIEHTFQISSLSSFEYVEPSG 124 (397)
Q Consensus 45 ~slM~EIA~aTyn~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd~r~hi~~I~~L~~FqYiD~~G 124 (397)
-..|..+|.. +......|+++|.++|.... -.+-+-.|-|++=+++|....+...+...+..+-. .-|+..
T Consensus 27 I~~Lt~~a~~--~~~~a~~Iv~~i~~~i~~~~--~~~KL~~LYLiddI~~n~~~~y~~~f~~~l~~~f~-~~y~~~---- 97 (144)
T d1szaa_ 27 ITTLTKLAEE--NISCAQYFVDAIESRIEKCM--PKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYK-RTYLLV---- 97 (144)
T ss_dssp HHHHHHHHHH--CGGGHHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHHH-HHHTTS----
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHhccC--cccchhhhhhHHHHHHHhHHHHHHHHHHHHHHHHH-HHHHcC----
Confidence 3334444443 45678889999999998754 35778899999999999888888888777664421 012211
Q ss_pred cchhhHHHHHHHHHHHhhcC----------hHHHHHHHHHHH
Q 016001 125 KDMGINVRKKAENIVALLNN----------KDKIQEVRNKAS 156 (397)
Q Consensus 125 kDqGinVReKAk~IveLL~D----------~e~LreER~KAk 156 (397)
...+|+|..+|+++-.+ ++.|+.-+..-.
T Consensus 98 ---~~~~r~kl~rll~iW~~r~~~~~~vFp~~~l~~ie~~L~ 136 (144)
T d1szaa_ 98 ---DNTTRTKLINMFKLWLNPNDTGLPLFEGSALEKIEQFLI 136 (144)
T ss_dssp ---CHHHHHHHHHHHHHHSSGGGCSSCSSCHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHhccCCCCcCCCCHHHHHHHHHHHH
Confidence 23799999999999865 666777665443
No 10
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.65 E-value=1.3e+02 Score=24.72 Aligned_cols=68 Identities=18% Similarity=0.216 Sum_probs=47.5
Q ss_pred HHHhhcCCCCCCC--HHHHHHHHHHcCCchhHHHHHHHHHHHhhcCCCchhhhhhHHHHHHHHHHcCCHh
Q 016001 32 VLDATDNEPWGPH--GTALAEIAQATKKFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSER 99 (397)
Q Consensus 32 VrEATsNDpWGPs--~slM~EIA~aTyn~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLEYLLkNGSEr 99 (397)
+.++...++-... ...+..|+...+-...++.++..|...+.+....|....-+|.+|.++.....+.
T Consensus 94 ll~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~~~~ 163 (458)
T d1ibrb_ 94 VLQTLGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPE 163 (458)
T ss_dssp HHHHTTCCCSSSCSHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGG
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHhCCcccCcchhHHHHHHHHhhcchHHHHHHHHHHHHHHHhhccch
Confidence 3455555443333 2355666666655567888999999999888778877777888888888776654
No 11
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.09 E-value=43 Score=25.54 Aligned_cols=68 Identities=13% Similarity=0.254 Sum_probs=41.8
Q ss_pred CchhhHHHHHHHHHHHHHHHhh----cCCCHHHHHHHHhhcCCCCCCCHHHHHHHHHHcCCchhHHHHHHHHHHHhhcC
Q 016001 1 MDFMKVFDQTVREIKREVNLKV----LKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFSECQMVMNVLWTRLAET 75 (397)
Q Consensus 1 md~~~~~~qtvr~ikRkV~n~V----~nySe~E~KVrEATsNDpWGPs~slM~EIA~aTyn~~~y~~IM~vLwKRL~d~ 75 (397)
+|++..+-..++.+++.++..+ .++|+.|..|..+..+.+ |++ ..+||+...-. .--+..+.++|...
T Consensus 6 ~dl~~~l~~~~~~~~~~~~~~~~~~~~~lt~~q~~vL~~l~~~~-~~t---~~~la~~l~~~---~~~vsr~l~~L~~~ 77 (141)
T d1lnwa_ 6 PDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQR-GLN---LQDLGRQMCRD---KALITRKIRELEGR 77 (141)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHSST-TCB---HHHHHHHTTCC---HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHCC-CCC---HHHHHHHHCcc---HhHHHHHHHHHHHh
Confidence 3666666666666666655433 478999999999997655 566 45555555332 12345555566543
No 12
>d1yvra1 a.118.25.1 (A:5-363) 60-kda SS-aARo ribonucleoprotein {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=27.27 E-value=61 Score=29.47 Aligned_cols=132 Identities=14% Similarity=0.115 Sum_probs=69.4
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHhhc-CCCCCCCHHHHHHHHHHcCCc---hhHHHHHHHHHHHhhc-----C----CCc
Q 016001 12 REIKREVNLKVLKVPEIEQKVLDATD-NEPWGPHGTALAEIAQATKKF---SECQMVMNVLWTRLAE-----T----GKD 78 (397)
Q Consensus 12 r~ikRkV~n~V~nySe~E~KVrEATs-NDpWGPs~slM~EIA~aTyn~---~~y~~IM~vLwKRL~d-----~----gk~ 78 (397)
|-+|+.|.+-..+.++.++. ..++. +.--|++ ..+|.+.++-. +....++..|-++... . ...
T Consensus 142 r~lrkav~~Wy~~~~~~~LA-~~~~Ky~~r~gwS---hkDlLrl~Hpkp~~~~~~~l~~~i~~g~~~~~~~~~~~~~~~~ 217 (359)
T d1yvra1 142 RALRKAVSDWYNTKDALNLA-MAVTKYKQRNGWS---HKDLLRLSHIKPANEGLTMVAKYVSKGWKEVQEAYKEKELSPE 217 (359)
T ss_dssp HHHHHHHHHHHHTSCHHHHH-HHHTSCCCSSSCC---HHHHHHHTTCCCSSHHHHHHHHHHHTCHHHHHHHTTTCCCCHH
T ss_pred HHHHHHHHHHHhcCCHHHHH-HHHHhcCCCCCCC---HHHHHHHcCCCCCcHHHHHHHHHHhcCccccccccccccccch
Confidence 45777788877788887655 44444 4444666 44556666432 3445555555544321 0 122
Q ss_pred hhhhhhHHHHHHHHHHcCCHh-HHHHHHh------------------------h---hhhhhcccceeeeCCCCcchhhH
Q 016001 79 WRYVYKALAVIEYLISHGSER-AVDDIIE------------------------H---TFQISSLSSFEYVEPSGKDMGIN 130 (397)
Q Consensus 79 WR~IYKAL~LLEYLLkNGSEr-vVdd~r~------------------------h---i~~I~~L~~FqYiD~~GkDqGin 130 (397)
+..+.+.+.-++.|-....+. ++.-++. + .-+|+.|.+|.- .|.-. .
T Consensus 218 ~~~~~~~~~~~~~~k~~~~~~~~~~lI~~~~Lt~E~~p~~~~~~~~vWeaLi~~mp~~ALLRNL~~l~~---~gvl~--~ 292 (359)
T d1yvra1 218 TEKVLKYLEATERVKRTKDELEIIHLIDEYRLVREHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTA---DSVLA--P 292 (359)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHCCCGGGSCTTGGGCHHHHHHHHHTCCHHHHHHHHHHHHH---TTTTC--T
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHcCCCHHHhhhhhccCHHHHHHHHHcCCHHHHHHHHHHHhh---cccCC--C
Confidence 344555555555555444442 1221221 1 234555555532 12100 0
Q ss_pred HHHHHHHHHHhhcChHHHHHHH
Q 016001 131 VRKKAENIVALLNNKDKIQEVR 152 (397)
Q Consensus 131 VReKAk~IveLL~D~e~LreER 152 (397)
-...++.|++-|.|++.|++.|
T Consensus 293 ~~~~~~~V~~rL~D~~~l~~ar 314 (359)
T d1yvra1 293 ASSEVSSVCERLTNEKLLKKAR 314 (359)
T ss_dssp TCHHHHHHHHHHTCHHHHHHTT
T ss_pred CcHHHHHHHHHhCCHHHHHHcc
Confidence 1223567999999999999877
No 13
>d2ijqa1 a.246.2.1 (A:14-158) Hypothetical protein rrnAC1037 {Haloarcula marismortui [TaxId: 2238]}
Probab=25.70 E-value=74 Score=25.83 Aligned_cols=84 Identities=7% Similarity=0.162 Sum_probs=52.1
Q ss_pred CchhHHHHHHHHHHHhhcCCCchhhhhhHHHHHH---H-HHHcCCHhHH-HHHHhhhhhhhcccceeeeCCCCcchhhHH
Q 016001 57 KFSECQMVMNVLWTRLAETGKDWRYVYKALAVIE---Y-LISHGSERAV-DDIIEHTFQISSLSSFEYVEPSGKDMGINV 131 (397)
Q Consensus 57 n~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LLE---Y-LLkNGSErvV-dd~r~hi~~I~~L~~FqYiD~~GkDqGinV 131 (397)
.|-+|.+|.+.+|+.....+ .=|.+|++|+.+- | -+.+|..+-+ .-++.-+..| ..|. ..-+|+.|
T Consensus 32 ~y~eaHE~lEe~W~~~~~~~-~er~~~QGLIQ~Aaa~~hh~~~gN~~GA~~l~~~al~~L---~~~~-----~~~~Gidv 102 (145)
T d2ijqa1 32 EFHESHDCFEDEWYNYGRGN-TESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYF---RGVP-----NDYYGVDL 102 (145)
T ss_dssp CHHHHHHHHHHHTTTTCSSS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---TTSC-----TTGGGBCH
T ss_pred CHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH---HhCC-----CccCCccH
Confidence 35677889999997665432 3467788887642 3 4677776533 3333333333 3331 12367777
Q ss_pred HHHHHHHHHhhcChHHHH
Q 016001 132 RKKAENIVALLNNKDKIQ 149 (397)
Q Consensus 132 ReKAk~IveLL~D~e~Lr 149 (397)
-.-...|.+++.|++.+.
T Consensus 103 ~~l~~~~~~~~~d~~~~~ 120 (145)
T d2ijqa1 103 LDVRTTVTNALSDPSALH 120 (145)
T ss_dssp HHHHHHHHHHHHCGGGGT
T ss_pred HHHHHHHHHHHhchhhcC
Confidence 777778888888887654
No 14
>d1rqja_ a.128.1.1 (A:) Farnesyl diphosphate synthase (geranyltranstransferase) {Escherichia coli [TaxId: 562]}
Probab=25.69 E-value=1.2e+02 Score=26.21 Aligned_cols=29 Identities=21% Similarity=0.055 Sum_probs=21.8
Q ss_pred hhcCCCchhhhhhHHHHHHHHHHcCCHhHHHH
Q 016001 72 LAETGKDWRYVYKALAVIEYLISHGSERAVDD 103 (397)
Q Consensus 72 L~d~gk~WR~IYKAL~LLEYLLkNGSErvVdd 103 (397)
+...||.+|.+ |.++-|-+.+|.+..+..
T Consensus 40 ~~~gGKrlRp~---l~~~~~~~~g~~~~~~~~ 68 (299)
T d1rqja_ 40 ALLGGKRLRPF---LVYATGHMFGVSTNTLDA 68 (299)
T ss_dssp HHSSCCCHHHH---HHHHHHHHTTCCHHHHHH
T ss_pred hhCCcccHHHH---HHHHHHHHcCCcchhHHH
Confidence 55679999985 777778888888864443
No 15
>d1ci4a_ a.60.5.1 (A:) Barrier-to-autointegration factor, BAF {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.24 E-value=22 Score=27.43 Aligned_cols=46 Identities=22% Similarity=0.239 Sum_probs=34.4
Q ss_pred CchhHHHHHHHHHHHhhcCCCchhhhhhHHHHH-HHHHHcCCHh-HHHHHHhh
Q 016001 57 KFSECQMVMNVLWTRLAETGKDWRYVYKALAVI-EYLISHGSER-AVDDIIEH 107 (397)
Q Consensus 57 n~~~y~~IM~vLwKRL~d~gk~WR~IYKAL~LL-EYLLkNGSEr-vVdd~r~h 107 (397)
.+.+...|=.+|-+||.++|- -||-+|| +|||.+..|+ +.+|+++-
T Consensus 19 ~V~~l~GIG~~lg~~L~~kGf-----dKAy~vLGqfL~l~kde~~F~~Wlk~~ 66 (89)
T d1ci4a_ 19 PVGSLAGIGEVLGKKLEERGF-----DKAYVVLGQFLVLKKDEDLFREWLKDT 66 (89)
T ss_dssp CGGGSTTCCHHHHHHHHHTTC-----CSHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred cccccCCccHHHHHHHHHcCc-----cHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 456677788999999999873 3566655 7899998886 66676653
Done!