Citrus Sinensis ID: 016001

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDIIEHTFQISSLSSFEYVEPSGKDMGINVRKKAENIVALLNNKDKIQEVRNKASANREKYFGLSSTGITYKSGSASFGTGGYRSSDRYGGSGDNFRESYKDRDPYGEEKTGNDTFGKSRRGAASENQGNTLKKGFARKDQDNMSSNASKSAMKSNDSDKYSSIPSQSSSIPSNKYDDDFDDFDPRGTSSNKSAAGNSKQVDPFGDSLIGDLMDAPTPAPAQTSATNGNASEVDLFADATFVSAQPEQGMGLNSQTKLLHQLTFLLPLNQLCIQNLRLQNLSRQLLILLIHLRRFH
ccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccCEEcccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccc
*****VFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDIIEHTFQISSLSSFEYVEPSGKDMGINVRKKAENIVALLNNKDKIQEVRNKASA****YFG****************************************************************************************************************************************************LMDAP**********************ATFV**********NSQTKLLHQLTFLLPLNQLCIQNLRLQNLSRQLLILLIHLRRF*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFSECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLISHGSERAVDDIIEHTFQISSLSSFEYVEPSGKDMGINVRKKAENIVALLNNKDKIQEVRNKASANREKYFGLSSTGITYKSGSASFGTGGYRSSDRYGGSGDNFRESYKDRDPYGEEKTGNDTFGKSRRGAASENQGNTLKKGFARKDQDNMSSNASKSAMKSNDSDKYSSIPSQSSSIPSNKYDDDFDDFDPRGTSSNKSAAGNSKQVDPFGDSLIGDLMDAPTPAPAQTSATNGNASEVDLFADATFVSAQPEQGMGLNSQTKLLHQLTFLLPLNQLCIQNLRLQNLSRQLLILLIHLRRFH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Clathrin interactor EPSIN 1 May have a role in transport via clathrin-coated vesicles from the trans-Golgi network to endosomes. Stimulates clathrin assembly (By similarity). Seems to not binds to phospholipids. Plays an important role in the vacuolar trafficking of soluble cargo proteins at the trans-Golgi network.probableQ8VY07

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1XGW, chain A
Confidence level:very confident
Coverage over the Query: 21-143
View the alignment between query and template
View the model in PyMOL