BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016003
(397 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WQ5|CBSX5_ARATH CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana
GN=CBSX5 PE=2 SV=2
Length = 391
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/405 (55%), Positives = 289/405 (71%), Gaps = 26/405 (6%)
Query: 1 MAVSLLADEVSDLCLGKPALRALSISAAIA-DALSALKNSDESFISVWDCNCCSNHRKLG 59
MA+SLL+ VSDLCLGKP LR LS S++ DA++ALK+S+++F+SVW+CN ++
Sbjct: 1 MALSLLSYNVSDLCLGKPPLRCLSSSSSSVSDAIAALKSSEDTFLSVWNCNHDDDNNT-- 58
Query: 60 DACECQCVGKVCMVDVICYLCKDSNSLSPSL-ALKQPVSVLLPQLLPPLVMHVEPSCSLL 118
EC+C+GK+ M DVIC+L KD + SL AL VSVLLP+ +V+HV+PSCSL+
Sbjct: 59 ---ECECLGKISMADVICHLSKDHDH---SLCALNSSVSVLLPKT-RSIVLHVQPSCSLI 111
Query: 119 EAMDLMLGGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNH-NGREFCWLTQEDIIRFILSS 177
EA+DL++ GAQNL+VPI + K+KQ S + T H NG+ FCW+TQEDII+F+L
Sbjct: 112 EAIDLIIKGAQNLIVPIHTKPYTKKKQHNDNVSVTTTTHSNGQRFCWITQEDIIQFLLGF 171
Query: 178 ISLFSPIPALSIDSLGIISTD--VVAVDYHSPASLALEAISRSLFDQTSVAVVDSDG--- 232
I+ FSP+PA+S+ LG+I++ VVAVDYHS AS + A+S +L QTSVAVVD +G
Sbjct: 172 IAAFSPLPAMSLSDLGVINSTHTVVAVDYHSSASAVVSAVSNALAVQTSVAVVDGEGDDP 231
Query: 233 --FLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEG 290
LIGEISP TL CCDET AAA+ TLSAGDLMAYID PPE LV++V+ RL+DKGL G
Sbjct: 232 FTSLIGEISPMTLTCCDETAAAAVATLSAGDLMAYIDGANPPESLVQIVRNRLEDKGLIG 291
Query: 291 MLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTS 350
++ FD SS S+ SS+EE+ R+ + RSMS SARM R++EAIVC+P S
Sbjct: 292 LMSLFDSLSSYS--TSSGYSSEEEAPV-----RTTSYGRSMSSSARMARKSEAIVCNPKS 344
Query: 351 SLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLET 395
SLMAVMIQA+AHRV Y WV+E D G+VTF D+LKVFRK LE
Sbjct: 345 SLMAVMIQAVAHRVNYAWVVEKDGCFVGMVTFVDILKVFRKFLEN 389
>sp|Q8GZA4|CBSX6_ARATH CBS domain-containing protein CBSX6 OS=Arabidopsis thaliana
GN=CBSX6 PE=1 SV=1
Length = 425
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 201/444 (45%), Gaps = 91/444 (20%)
Query: 1 MAVSLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGD 60
MA L V DL +GKP + + + A+ A+ S E I VW + +
Sbjct: 1 MASVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWRKRTTPSLPGFVE 60
Query: 61 ACECQ---CVGKVCMVDVICYLCKDSNSLSPSLALKQPVSVLLPQLLPP---LVMHVEPS 114
E + VG + +D++ +L K + L A+K PVS +++ P L+ V+P
Sbjct: 61 NSEMRQQRFVGILNSLDIVAFLAK-TECLQEEKAMKIPVS----EVVSPDNTLLKQVDPG 115
Query: 115 CSLLEAMDLMLGGAQNLVVP-------IKNRLSIKRKQQ------------------QKL 149
L++A+++M G + L+VP + R SI +
Sbjct: 116 TRLIDALEMMKQGVRRLLVPKSVVWRGMSKRFSILYNGKWLKNSENSSSSSGLSADSTNR 175
Query: 150 SSSSLTNHNGREFCWLTQEDIIRFILSSISLFSPIPALSIDSLGIISTDVVAVDYHSPAS 209
++S+T+ + FC L++ED+IRF++ + +P+P SI +LGII+ + ++ P
Sbjct: 176 PTTSMTSSRDK-FCCLSREDVIRFLIGVLGALAPLPLTSISTLGIINQNYNFIEASLP-- 232
Query: 210 LALEAISRSLFDQTSVAVVDS----DGF-LIGEISPSTLGCCD-ETVAAAITTLSAGDLM 263
A+EA R L D +++AV++ F +IGEIS S L CD A A+ L AG +
Sbjct: 233 -AIEATRRPLCDPSAIAVLEQTENEQQFKIIGEISASKLWKCDYLAAAWALANLYAGQFV 291
Query: 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSS-SLMPYLSTSSSSDEES-TATSKL 321
+ ED +MSS S +L TS E++ TAT+
Sbjct: 292 MGV------ED---------------------NMSSRSFSDFLQTSFPGGEQNGTATNAK 324
Query: 322 TRSGKHSRSMSYSA----------RMVR-RAEAIVCHPTSSLMAVMIQAIAHRVTYVWVI 370
S SRS+ ++ M R R+ + C +SSL AVM Q ++HR T+VWV
Sbjct: 325 KFS---SRSIGFNPTSPTRLSIGRSMYRGRSAPLTCKTSSSLAAVMAQMLSHRATHVWVT 381
Query: 371 EDDC--TLTGIVTFSDLLKVFRKH 392
E D L G+V + ++L K
Sbjct: 382 EADSDDVLVGVVGYGEILTAVTKQ 405
>sp|Q8GXI9|PV42B_ARATH SNF1-related protein kinase regulatory subunit gamma-like PV42b
OS=Arabidopsis thaliana GN=PV42B PE=2 SV=1
Length = 357
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 161/401 (40%), Gaps = 70/401 (17%)
Query: 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISV------W---DCNCCSNH 55
L+ +V DL + K L + +A + DAL+ + + + V W +
Sbjct: 7 LMQFKVKDLMIDKRRLVEVPDNATLGDALNTMVANRVRAVPVAAKPGQWLGAGGSMIVEL 66
Query: 56 RKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSLALKQPVSVLL---PQLLPPLVMHVE 112
K + Q +G V M+DV+ ++ D + PVS ++ P+ L + +
Sbjct: 67 DKQSGSARKQYIGMVTMLDVVAHIAGDDGESGLDKKMAAPVSSIIGHCPEGLS--LWSLN 124
Query: 113 PSCSLLEAMDLMLGGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIR 172
P+ S+++ M+++ G ++VP+ + + ++ L + + L+Q D+I
Sbjct: 125 PNTSIMDCMEMLSKGIHRVLVPLDS-------NTENITGPELVE-SASAYAMLSQMDLIS 176
Query: 173 FILSSISLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDG 232
F S I + ++ L I V+A+ + A++ +S ++ + +V +V++ G
Sbjct: 177 FFFDQSSQLHGILSHTVTDLSAIHNTVLALTSQARVKDAIQCMSIAMLN--AVPIVEASG 234
Query: 233 FLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGML 292
GE + + V + T SA DL KG
Sbjct: 235 E--GEDHKQLVDGKNRRV---VGTFSASDL-----------------------KGC---- 262
Query: 293 EHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSL 352
H S +P + K+ R+ + + S R E + CH TS+L
Sbjct: 263 -HLATLRSWLPLNALE--------FVEKIPRTLLFTAATSTPGR-----ELVTCHVTSTL 308
Query: 353 MAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393
V+ RV VWV++ + L G+V+ +D++ V R L
Sbjct: 309 AQVIHMVTTKRVHRVWVVDQNGGLQGLVSLTDIIAVVRSAL 349
>sp|Q09826|SDS23_SCHPO Protein sds23/moc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=sds23 PE=1 SV=1
Length = 408
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 153 SLTNHNGREFCWLTQEDIIRFILSSISLF---SPIPALSIDSLGIISTDVVAVDYHSPAS 209
++TN G +Q IIRF+ ++I F P+ + +I SL I STD+ + +
Sbjct: 169 AVTNEQGELSFMASQRSIIRFLWNNIRAFPDLEPLMSRTIHSLDIGSTDITCISGDQKVA 228
Query: 210 LALEAISRSLFDQTSVAVVDSDGFLIGEIS 239
AL ++++ S+AVVD+ L+G IS
Sbjct: 229 AALRQMNQTGIG--SLAVVDAQFRLLGNIS 256
>sp|P40689|TSL_DROME Torso-like protein OS=Drosophila melanogaster GN=tsl PE=1 SV=2
Length = 353
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 278 VVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARM 337
++KER+K KGL G L D+ + P+ + ++A + + R + R + Y +
Sbjct: 225 MIKERIKSKGLNG-LSKLDLYNYFAPWFAAHLGQIRSASANATVERWAR--RKLQYEYYV 281
Query: 338 VRRAEAIVCHPTSSLM 353
V+ + H S+L+
Sbjct: 282 VKYVTLLKLHGNSTLL 297
>sp|P31400|VATA_MANSE V-type proton ATPase catalytic subunit A OS=Manduca sexta GN=VHAA
PE=2 SV=1
Length = 617
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 240 PSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLK-DKGLEGMLEHFDMS 298
P GC ++ A++ S D++ Y+ CG ++ V+++ + +EG+ E
Sbjct: 249 PGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTVEIEGVTESIMKR 308
Query: 299 SSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMV-----RRAEAI 344
++L+ S + E++ + +T S ++ R M Y+ M+ R AEA+
Sbjct: 309 TALVANTSNMPVAAREASIYTGITLS-EYFRDMGYNVSMMADSTSRWAEAL 358
>sp|B8JES4|TRMFO_ANAD2 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC
BAA-258) GN=trmFO PE=3 SV=1
Length = 453
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 123 LMLGGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFILSSISLFS 182
L+LG A VP + L++ R++ + ++ LT H G +R + +
Sbjct: 79 LVLGCADETRVPAGDALAVDRERFSEAVTARLTGHAG-----------VRIVHRELEELP 127
Query: 183 PIPALSIDSLGIISTDVVA 201
P PAL++ + G ++ D +A
Sbjct: 128 PPPALAVIATGPLTADALA 146
>sp|P65167|IMDH_MYCTU Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium
tuberculosis GN=guaB PE=1 SV=1
Length = 529
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 337 MVRRAEA------IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDL 385
MV+R+EA + C P ++L V R++ + V++DD L GI+T D+
Sbjct: 121 MVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISGLPVVDDDGALVGIITNRDM 175
>sp|P65168|IMDH_MYCBO Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=guaB PE=3 SV=1
Length = 529
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 337 MVRRAEA------IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDL 385
MV+R+EA + C P ++L V R++ + V++DD L GI+T D+
Sbjct: 121 MVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISGLPVVDDDGALVGIITNRDM 175
>sp|Q2TJ56|VATA_AEDAL V-type proton ATPase catalytic subunit A OS=Aedes albopictus
GN=VhaA PE=2 SV=1
Length = 614
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 240 PSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLK-DKGLEGMLEHFDMS 298
P GC ++ A++ S D++ Y+ CG ++ V+++ + ++G+ E
Sbjct: 246 PGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKR 305
Query: 299 SSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMV-----RRAEAI 344
++L+ S + E++ + +T S ++ R M Y+ M+ R AEA+
Sbjct: 306 TALVANTSNMPVAAREASIYTGITLS-EYFRDMGYNVSMMADSTSRWAEAL 355
>sp|O16109|VATA_AEDAE V-type proton ATPase catalytic subunit A OS=Aedes aegypti GN=VhaA
PE=2 SV=2
Length = 614
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 240 PSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLK-DKGLEGMLEHFDMS 298
P GC ++ A++ S D++ Y+ CG ++ V+++ + ++G+ E
Sbjct: 246 PGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKR 305
Query: 299 SSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMV-----RRAEAI 344
++L+ S + E++ + +T S ++ R M Y+ M+ R AEA+
Sbjct: 306 TALVANTSNMPVAAREASIYTGITLS-EYFRDMGYNVSMMADSTSRWAEAL 355
>sp|Q27331|VATA2_DROME V-type proton ATPase catalytic subunit A isoform 2 OS=Drosophila
melanogaster GN=Vha68-2 PE=1 SV=2
Length = 614
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 240 PSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLK-DKGLEGMLEHFDMS 298
P GC ++ A++ S D++ Y+ CG ++ V+++ + ++G+ E
Sbjct: 246 PGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKR 305
Query: 299 SSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMV-----RRAEAI 344
++L+ S + E++ + +T S ++ R M Y+ M+ R AEA+
Sbjct: 306 TALVANTSNMPVAAREASIYTGITLS-EYFRDMGYNVSMMADSTSRWAEAL 355
>sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis
thaliana GN=CBSX1 PE=1 SV=2
Length = 236
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 315 STATSKLTRSGKHSRSMSYSAR--MVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIED 372
S A S L + RS Y+ M ++ + V PT+++ + + +R+T VI++
Sbjct: 57 SAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE 116
Query: 373 DCTLTGIVTFSDLL 386
D L G+V+ DLL
Sbjct: 117 DWKLVGLVSDYDLL 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,926,920
Number of Sequences: 539616
Number of extensions: 5057128
Number of successful extensions: 15651
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 15616
Number of HSP's gapped (non-prelim): 47
length of query: 397
length of database: 191,569,459
effective HSP length: 120
effective length of query: 277
effective length of database: 126,815,539
effective search space: 35127904303
effective search space used: 35127904303
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)