Query 016003
Match_columns 397
No_of_seqs 153 out of 1316
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 06:14:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 4.7E-36 1.6E-40 291.7 22.6 283 3-392 25-321 (323)
2 3kh5_A Protein MJ1225; AMPK, A 100.0 7E-34 2.4E-38 269.5 21.3 267 9-389 4-279 (280)
3 2qrd_G Protein C1556.08C; AMPK 100.0 2.4E-33 8.2E-38 273.8 24.8 282 4-394 18-318 (334)
4 2v8q_E 5'-AMP-activated protei 100.0 3.9E-33 1.3E-37 272.2 24.5 282 3-392 30-324 (330)
5 3ddj_A CBS domain-containing p 100.0 1.9E-33 6.4E-38 270.1 19.1 267 5-394 17-288 (296)
6 2yzq_A Putative uncharacterize 100.0 1.7E-32 5.9E-37 260.8 15.8 277 8-391 1-279 (282)
7 3ddj_A CBS domain-containing p 99.9 1.8E-22 6E-27 193.5 15.5 193 91-393 17-216 (296)
8 3kh5_A Protein MJ1225; AMPK, A 99.9 1.6E-22 5.5E-27 191.2 12.7 187 7-245 83-277 (280)
9 4esy_A CBS domain containing m 99.9 4.6E-22 1.6E-26 176.1 10.7 148 186-393 17-164 (170)
10 2yzq_A Putative uncharacterize 99.9 1.6E-21 5.6E-26 184.9 12.1 190 6-245 58-275 (282)
11 3t4n_C Nuclear protein SNF4; C 99.8 1.8E-20 6.1E-25 181.7 14.0 181 17-240 121-311 (323)
12 2v8q_E 5'-AMP-activated protei 99.8 8.7E-20 3E-24 177.5 11.4 186 11-239 121-313 (330)
13 2qrd_G Protein C1556.08C; AMPK 99.8 4E-19 1.4E-23 173.0 14.2 183 14-239 113-305 (334)
14 3lv9_A Putative transporter; C 99.8 4.1E-18 1.4E-22 146.8 12.0 125 184-393 20-147 (148)
15 3jtf_A Magnesium and cobalt ef 99.8 5.8E-18 2E-22 142.7 12.5 123 186-394 4-129 (129)
16 3lhh_A CBS domain protein; str 99.8 4.4E-18 1.5E-22 150.9 11.7 124 185-393 40-166 (172)
17 3i8n_A Uncharacterized protein 99.8 6.5E-18 2.2E-22 142.5 12.1 122 186-391 5-129 (130)
18 3nqr_A Magnesium and cobalt ef 99.7 8E-18 2.7E-22 141.3 12.0 121 187-391 3-126 (127)
19 3k6e_A CBS domain protein; str 99.7 2.6E-18 8.9E-23 150.6 8.9 123 194-393 20-144 (156)
20 3hf7_A Uncharacterized CBS-dom 99.7 7.4E-18 2.5E-22 142.5 11.3 120 194-393 7-129 (130)
21 3kpb_A Uncharacterized protein 99.7 1E-17 3.6E-22 138.8 11.6 115 194-391 6-120 (122)
22 2ef7_A Hypothetical protein ST 99.7 2.7E-17 9.4E-22 138.5 13.7 128 186-396 3-130 (133)
23 3lfr_A Putative metal ION tran 99.7 9.5E-18 3.2E-22 142.8 11.0 124 187-393 3-129 (136)
24 4gqw_A CBS domain-containing p 99.7 1.1E-17 3.9E-22 143.4 11.4 140 187-394 5-146 (152)
25 2nyc_A Nuclear protein SNF4; b 99.7 2E-17 6.9E-22 140.7 12.0 130 185-392 6-142 (144)
26 4esy_A CBS domain containing m 99.7 7.6E-18 2.6E-22 148.9 8.5 132 4-176 14-162 (170)
27 3gby_A Uncharacterized protein 99.7 2.2E-17 7.6E-22 138.7 10.6 124 186-392 4-127 (128)
28 2yzi_A Hypothetical protein PH 99.7 5E-17 1.7E-21 137.8 12.8 127 186-395 6-133 (138)
29 2p9m_A Hypothetical protein MJ 99.7 5.9E-17 2E-21 137.2 12.8 125 186-392 7-137 (138)
30 3lqn_A CBS domain protein; csg 99.7 4.7E-17 1.6E-21 140.1 11.8 132 186-395 14-147 (150)
31 2uv4_A 5'-AMP-activated protei 99.7 6.8E-17 2.3E-21 139.8 12.8 134 186-391 17-151 (152)
32 3fhm_A Uncharacterized protein 99.7 3.2E-17 1.1E-21 144.0 10.6 134 179-393 16-152 (165)
33 2rih_A Conserved protein with 99.7 1.1E-16 3.8E-21 136.5 13.6 122 187-391 5-128 (141)
34 3fv6_A YQZB protein; CBS domai 99.7 1.3E-16 4.3E-21 139.3 14.0 128 186-395 16-148 (159)
35 3sl7_A CBS domain-containing p 99.7 3.5E-17 1.2E-21 144.6 9.8 149 194-394 9-159 (180)
36 3oco_A Hemolysin-like protein 99.7 3.1E-17 1E-21 142.3 9.0 123 186-393 19-145 (153)
37 3k6e_A CBS domain protein; str 99.7 1E-16 3.5E-21 140.4 12.1 135 5-180 12-146 (156)
38 2o16_A Acetoin utilization pro 99.7 1.5E-16 5E-21 139.2 13.1 133 187-393 5-137 (160)
39 1pbj_A Hypothetical protein; s 99.7 1.3E-16 4.4E-21 132.6 11.6 118 194-392 6-123 (125)
40 3kxr_A Magnesium transporter, 99.7 3.6E-16 1.2E-20 143.2 14.7 122 185-393 52-176 (205)
41 1y5h_A Hypothetical protein RV 99.7 5.8E-17 2E-21 136.5 8.6 124 186-391 7-131 (133)
42 3oi8_A Uncharacterized protein 99.7 1.5E-16 5.2E-21 138.6 11.2 116 186-386 37-155 (156)
43 1pvm_A Conserved hypothetical 99.7 2.3E-16 8E-21 141.0 12.5 125 187-391 9-133 (184)
44 2rc3_A CBS domain; in SITU pro 99.7 1.9E-16 6.7E-21 133.8 11.2 123 188-393 7-133 (135)
45 2emq_A Hypothetical conserved 99.7 2.6E-16 8.8E-21 136.3 12.2 132 185-394 9-142 (157)
46 3k2v_A Putative D-arabinose 5- 99.7 2.3E-16 7.7E-21 136.1 11.5 120 186-387 27-148 (149)
47 3l2b_A Probable manganase-depe 99.7 5.8E-16 2E-20 144.7 15.2 202 6-245 5-240 (245)
48 3ctu_A CBS domain protein; str 99.7 1E-16 3.6E-21 138.9 9.3 131 186-395 14-146 (156)
49 1yav_A Hypothetical protein BS 99.7 1.8E-16 6.2E-21 138.0 10.9 134 183-394 10-145 (159)
50 1o50_A CBS domain-containing p 99.7 5E-16 1.7E-20 135.1 13.2 141 186-394 15-156 (157)
51 3ocm_A Putative membrane prote 99.7 9.6E-17 3.3E-21 143.0 8.7 122 186-393 35-159 (173)
52 1vr9_A CBS domain protein/ACT 99.7 5.5E-16 1.9E-20 142.4 13.4 114 194-392 18-131 (213)
53 3l2b_A Probable manganase-depe 99.7 5.6E-16 1.9E-20 144.8 13.5 57 335-391 187-244 (245)
54 2pfi_A Chloride channel protei 99.7 5E-16 1.7E-20 135.1 12.2 130 186-393 12-149 (164)
55 3i8n_A Uncharacterized protein 99.6 5.9E-16 2E-20 130.4 11.0 126 4-175 2-128 (130)
56 3lv9_A Putative transporter; C 99.6 1.9E-15 6.4E-20 130.0 13.7 126 4-176 19-145 (148)
57 3hf7_A Uncharacterized CBS-dom 99.6 8.2E-16 2.8E-20 129.9 11.1 125 8-176 2-127 (130)
58 2d4z_A Chloride channel protei 99.6 5.6E-16 1.9E-20 146.4 10.9 55 338-393 194-248 (250)
59 3lqn_A CBS domain protein; csg 99.6 9E-16 3.1E-20 132.0 10.7 135 4-179 11-146 (150)
60 4fry_A Putative signal-transdu 99.6 9.8E-16 3.4E-20 132.9 10.4 117 197-393 21-137 (157)
61 2j9l_A Chloride channel protei 99.6 1.3E-15 4.6E-20 135.2 11.1 149 186-393 10-167 (185)
62 3lhh_A CBS domain protein; str 99.6 2.7E-15 9.1E-20 132.9 12.7 126 4-176 38-164 (172)
63 3oco_A Hemolysin-like protein 99.6 2E-15 6.7E-20 130.8 10.4 125 5-176 17-143 (153)
64 2ef7_A Hypothetical protein ST 99.6 3.9E-15 1.3E-19 125.2 12.0 128 5-180 1-129 (133)
65 2oux_A Magnesium transporter; 99.6 3.3E-15 1.1E-19 143.6 12.9 124 183-393 133-261 (286)
66 3jtf_A Magnesium and cobalt ef 99.6 3.4E-15 1.2E-19 125.6 11.4 123 6-176 3-126 (129)
67 3ctu_A CBS domain protein; str 99.6 3.3E-15 1.1E-19 129.5 10.9 137 4-181 11-147 (156)
68 3nqr_A Magnesium and cobalt ef 99.6 1.8E-15 6.1E-20 126.9 8.8 123 7-175 2-125 (127)
69 3kpb_A Uncharacterized protein 99.6 5.2E-15 1.8E-19 122.4 11.1 119 8-176 1-120 (122)
70 3fv6_A YQZB protein; CBS domai 99.6 6.9E-15 2.3E-19 128.2 12.3 133 3-177 12-145 (159)
71 2p9m_A Hypothetical protein MJ 99.6 6.7E-15 2.3E-19 124.4 11.5 129 1-176 1-136 (138)
72 3fhm_A Uncharacterized protein 99.6 4.3E-15 1.5E-19 130.3 10.4 130 4-177 20-151 (165)
73 3lfr_A Putative metal ION tran 99.6 2.4E-15 8.2E-20 127.8 8.0 125 7-176 2-127 (136)
74 2yvy_A MGTE, Mg2+ transporter 99.6 8.3E-15 2.8E-19 139.9 12.5 121 186-393 134-259 (278)
75 2yzi_A Hypothetical protein PH 99.6 1.5E-14 5.3E-19 122.3 12.4 127 4-177 3-130 (138)
76 1pbj_A Hypothetical protein; s 99.6 1.8E-14 6.2E-19 119.5 12.5 121 8-176 1-122 (125)
77 2rc3_A CBS domain; in SITU pro 99.6 1.5E-14 5E-19 122.1 12.0 129 4-177 1-132 (135)
78 2rih_A Conserved protein with 99.6 3.6E-14 1.2E-18 120.7 13.5 122 7-176 4-128 (141)
79 4gqw_A CBS domain-containing p 99.6 5E-15 1.7E-19 126.8 8.2 133 7-177 4-144 (152)
80 1vr9_A CBS domain protein/ACT 99.6 1.2E-14 4.1E-19 133.5 11.2 160 8-232 13-174 (213)
81 1yav_A Hypothetical protein BS 99.6 1.5E-14 5.1E-19 125.8 11.2 134 4-178 10-144 (159)
82 2emq_A Hypothetical conserved 99.6 2E-14 6.9E-19 124.3 11.8 136 4-180 7-143 (157)
83 3ocm_A Putative membrane prote 99.6 1.8E-14 6.1E-19 128.2 11.3 124 5-176 33-157 (173)
84 4fry_A Putative signal-transdu 99.5 3.2E-14 1.1E-18 123.3 12.3 125 8-177 7-136 (157)
85 2o16_A Acetoin utilization pro 99.5 3.8E-14 1.3E-18 123.7 12.3 131 6-177 3-136 (160)
86 3gby_A Uncharacterized protein 99.5 1.6E-14 5.5E-19 121.0 9.1 123 6-176 3-126 (128)
87 3sl7_A CBS domain-containing p 99.5 1.5E-14 5.2E-19 127.6 9.2 136 7-180 3-160 (180)
88 2nyc_A Nuclear protein SNF4; b 99.5 4.9E-14 1.7E-18 119.6 11.7 133 4-177 4-142 (144)
89 1y5h_A Hypothetical protein RV 99.5 1.4E-14 4.9E-19 121.7 7.8 124 5-175 5-130 (133)
90 2uv4_A 5'-AMP-activated protei 99.5 3.5E-14 1.2E-18 122.6 10.0 128 5-175 20-150 (152)
91 2j9l_A Chloride channel protei 99.5 6.4E-14 2.2E-18 124.3 11.7 136 3-177 6-166 (185)
92 3k2v_A Putative D-arabinose 5- 99.5 4.8E-14 1.6E-18 121.4 10.3 120 8-172 28-148 (149)
93 3oi8_A Uncharacterized protein 99.5 2.2E-14 7.6E-19 124.8 8.1 120 5-171 35-155 (156)
94 1o50_A CBS domain-containing p 99.5 1.7E-13 6E-18 118.9 13.3 131 5-177 13-154 (157)
95 2pfi_A Chloride channel protei 99.5 2E-13 6.9E-18 118.5 12.6 137 5-178 10-149 (164)
96 2zy9_A Mg2+ transporter MGTE; 99.5 1.9E-13 6.4E-18 140.4 14.3 121 186-393 154-279 (473)
97 3org_A CMCLC; transporter, tra 99.5 9.6E-15 3.3E-19 155.0 4.0 174 186-395 452-629 (632)
98 1pvm_A Conserved hypothetical 99.5 1.5E-13 5.3E-18 122.6 11.1 125 7-176 8-133 (184)
99 3pc3_A CG1753, isoform A; CBS, 99.5 9.7E-14 3.3E-18 144.3 9.3 125 186-393 383-513 (527)
100 2d4z_A Chloride channel protei 99.4 4.4E-13 1.5E-17 126.5 10.8 133 4-175 9-245 (250)
101 3kxr_A Magnesium transporter, 99.4 1.1E-12 3.9E-17 119.8 13.0 121 5-177 51-175 (205)
102 3usb_A Inosine-5'-monophosphat 99.4 8.6E-13 2.9E-17 136.5 11.9 114 194-391 118-234 (511)
103 1zfj_A Inosine monophosphate d 99.4 3.3E-12 1.1E-16 131.6 12.4 114 194-391 95-211 (491)
104 3pc3_A CG1753, isoform A; CBS, 99.3 2.5E-12 8.7E-17 133.6 10.3 131 5-178 381-513 (527)
105 2oux_A Magnesium transporter; 99.3 4.4E-12 1.5E-16 121.7 10.3 121 5-177 134-260 (286)
106 1me8_A Inosine-5'-monophosphat 99.3 2.6E-13 9.1E-18 140.2 0.1 115 195-392 103-222 (503)
107 4af0_A Inosine-5'-monophosphat 99.3 2.7E-13 9.3E-18 138.3 0.0 110 195-389 144-256 (556)
108 4fxs_A Inosine-5'-monophosphat 99.3 6.8E-13 2.3E-17 136.8 3.0 112 194-389 94-207 (496)
109 1vrd_A Inosine-5'-monophosphat 99.3 2.9E-13 9.8E-18 139.6 0.1 114 194-391 100-215 (494)
110 3org_A CMCLC; transporter, tra 99.3 2.3E-12 8E-17 136.7 6.9 170 6-245 451-621 (632)
111 2yvy_A MGTE, Mg2+ transporter 99.3 1.1E-11 3.7E-16 118.3 10.0 120 5-176 132-257 (278)
112 4avf_A Inosine-5'-monophosphat 99.3 5.6E-13 1.9E-17 137.3 0.1 112 194-390 93-206 (490)
113 1jcn_A Inosine monophosphate d 99.1 1.1E-12 3.6E-17 136.1 -5.4 131 166-389 96-231 (514)
114 3ghd_A A cystathionine beta-sy 99.1 1.1E-10 3.7E-15 88.4 6.8 66 19-103 1-66 (70)
115 3usb_A Inosine-5'-monophosphat 99.1 9.7E-10 3.3E-14 113.7 16.2 164 10-232 109-279 (511)
116 2zy9_A Mg2+ transporter MGTE; 99.1 1.8E-10 6.1E-15 118.2 10.6 119 6-176 153-277 (473)
117 2cu0_A Inosine-5'-monophosphat 99.0 2.1E-11 7.3E-16 125.4 0.0 110 194-390 98-207 (486)
118 1me8_A Inosine-5'-monophosphat 99.0 9.9E-11 3.4E-15 121.0 4.3 162 17-233 104-266 (503)
119 1zfj_A Inosine monophosphate d 99.0 4.4E-09 1.5E-13 108.1 16.3 118 9-176 91-211 (491)
120 3ghd_A A cystathionine beta-sy 99.0 5.1E-10 1.7E-14 84.7 6.3 48 343-391 2-49 (70)
121 1vrd_A Inosine-5'-monophosphat 98.9 6.2E-10 2.1E-14 114.7 4.5 117 10-175 97-214 (494)
122 4fxs_A Inosine-5'-monophosphat 98.8 1.9E-09 6.5E-14 111.1 5.6 114 96-247 91-207 (496)
123 3fio_A A cystathionine beta-sy 98.8 8.2E-09 2.8E-13 76.7 7.2 49 342-391 1-49 (70)
124 4avf_A Inosine-5'-monophosphat 98.8 2.7E-09 9.3E-14 109.8 4.9 117 9-175 89-206 (490)
125 4af0_A Inosine-5'-monophosphat 98.8 9.4E-10 3.2E-14 112.4 0.0 109 19-174 147-256 (556)
126 1jcn_A Inosine monophosphate d 98.6 1.8E-09 6.3E-14 111.7 -1.7 120 95-247 109-231 (514)
127 3fio_A A cystathionine beta-sy 98.6 6E-08 2E-12 71.9 7.1 66 19-103 1-66 (70)
128 2cu0_A Inosine-5'-monophosphat 98.5 1.2E-08 4.1E-13 104.9 -0.2 103 108-247 103-206 (486)
129 1tif_A IF3-N, translation init 57.3 17 0.00058 27.3 4.9 28 364-391 13-40 (78)
130 1svj_A Potassium-transporting 38.4 13 0.00044 31.6 1.8 36 351-387 120-155 (156)
131 3fan_A Non-structural protein; 24.1 37 0.0013 30.3 2.3 23 362-384 124-146 (213)
132 1p0z_A Sensor kinase CITA; tra 22.9 50 0.0017 26.3 2.8 16 367-382 106-121 (131)
133 3tjo_A Serine protease HTRA1; 20.9 49 0.0017 29.4 2.5 21 362-382 186-206 (231)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=4.7e-36 Score=291.71 Aligned_cols=283 Identities=19% Similarity=0.230 Sum_probs=213.7
Q ss_pred cccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhh-
Q 016003 3 VSLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCK- 81 (397)
Q Consensus 3 ~~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~- 81 (397)
.||.+++|+|+|..+.++++++.++|+.+|+++|.+++++++||||.+ .++++|+++..|++.++..
T Consensus 25 ~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~------------~~~lvGilt~~Dl~~~l~~~ 92 (323)
T 3t4n_C 25 KFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSK------------TSRFAGLLTTTDFINVIQYY 92 (323)
T ss_dssp HHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETT------------TTEEEEEECHHHHHHHHHHH
T ss_pred HHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCC------------CCeEEEEEEHHHHHHHHHHH
Confidence 477899999999988899999999999999999999999999999964 3599999999999987742
Q ss_pred ---cCCCCChhhhhcCChhhhccC--CCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhccccccccc
Q 016003 82 ---DSNSLSPSLALKQPVSVLLPQ--LLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLT 155 (397)
Q Consensus 82 ---~~~l~~~~~~~~~~V~~lm~~--~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~ 155 (397)
+.............+.+++.. -...+++++.+++++.+|++.|. +++++++|.+.+...
T Consensus 93 ~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~--------------- 157 (323)
T 3t4n_C 93 FSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEET--------------- 157 (323)
T ss_dssp HHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTT---------------
T ss_pred HcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCC---------------
Confidence 110000011112334555410 01234889999999999999999 799999998643210
Q ss_pred CCCCceeeeecHHHHHHHHHhccCCCCCCccCCccccCC-CCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcE
Q 016003 156 NHNGREFCWLTQEDIIRFILSSISLFSPIPALSIDSLGI-ISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFL 234 (397)
Q Consensus 156 ~~~~~~~~IITq~DIi~~l~~~~~~l~~l~~~ti~~L~~-~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~l 234 (397)
+...++|+||+.|+++++..+... ..+...++.++++ |+++++++.+++++.+|++.|.++++ +++||||++|++
T Consensus 158 -~~~~l~Givt~~di~~~l~~~~~~-~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~--~~~pVvd~~~~~ 233 (323)
T 3t4n_C 158 -HREIVVSVLTQYRILKFVALNCRE-THFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRV--SSVPIIDENGYL 233 (323)
T ss_dssp -CCEEEEEEEEHHHHHHHHHHHCGG-GGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTC--SEEEEECTTCBE
T ss_pred -CccceEEEecHHHHHHHHHhcCCc-hhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCC--CEEEEECCCCeE
Confidence 111378999999999999865433 3345678888544 66899999999999999999999999 999999999999
Q ss_pred EEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCcc
Q 016003 235 IGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEE 314 (397)
Q Consensus 235 vG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (397)
+|+||. +|++.++... .. ..+ ...+
T Consensus 234 ~Giit~-------------------~dl~~~~~~~-----~~----~~~-~~~v-------------------------- 258 (323)
T 3t4n_C 234 INVYEA-------------------YDVLGLIKGG-----IY----NDL-SLSV-------------------------- 258 (323)
T ss_dssp EEEEET-------------------THHHHHHHTT-----HH----HHT-TSBH--------------------------
T ss_pred EEEEeH-------------------HHHHHHHhhc-----hh----hhc-cCCH--------------------------
Confidence 999664 4444422110 00 000 0000
Q ss_pred chhhhccccCCCccccccchhhhhcCC------ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHH
Q 016003 315 STATSKLTRSGKHSRSMSYSARMVRRA------EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKV 388 (397)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~ 388 (397)
..+|.. ++++|++++++.+++++|.+++++++||||++|+++||||.+||+++
T Consensus 259 ---------------------~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~ 317 (323)
T 3t4n_C 259 ---------------------GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKY 317 (323)
T ss_dssp ---------------------HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHH
T ss_pred ---------------------HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHH
Confidence 112333 78999999999999999999999999999998999999999999999
Q ss_pred HHHH
Q 016003 389 FRKH 392 (397)
Q Consensus 389 l~~~ 392 (397)
+..+
T Consensus 318 l~~~ 321 (323)
T 3t4n_C 318 ILLG 321 (323)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 9864
No 2
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=7e-34 Score=269.50 Aligned_cols=267 Identities=17% Similarity=0.290 Sum_probs=206.1
Q ss_pred hhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc------
Q 016003 9 EVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD------ 82 (397)
Q Consensus 9 ~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~------ 82 (397)
++.+++. +++++++++++|+.+|+++|.++++.++||+|++ .++++|++|..||+.++...
T Consensus 4 ~v~~~i~-~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~------------~~~~~Givt~~di~~~~~~~~~~~~~ 70 (280)
T 3kh5_A 4 RVMKIAQ-NKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAG------------NNKVVGIITSMDIVDFMGGGSKYNLI 70 (280)
T ss_dssp BGGGTSC-CSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTT------------TCBEEEEEEHHHHHHHTTTSGGGHHH
T ss_pred hHHHHhc-CCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECC------------CCeEEEEEEHHHHHHHhcccchhhhh
Confidence 4555553 4589999999999999999999999999999962 36899999999999987531
Q ss_pred --CCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCC
Q 016003 83 --SNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNG 159 (397)
Q Consensus 83 --~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
.........++.+|+++|... ++++.+++++.+|++.|. +++++++|.+++ +
T Consensus 71 ~~~~~~~~~~~~~~~v~~im~~~----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---------------------~ 125 (280)
T 3kh5_A 71 REKHERNFLAAINEPVREIMEEN----VITLKENADIDEAIETFLTKNVGGAPIVNDE---------------------N 125 (280)
T ss_dssp HTTSTTCHHHHTTSBGGGTSBCS----CCCEETTCBHHHHHHHHHHTTCSEEEEECTT---------------------C
T ss_pred hhccccchhHHhhhhHHHhcCCC----CEEECCCCCHHHHHHHHHhCCCCEEEEEcCC---------------------C
Confidence 111222234578999999754 889999999999999999 799999988532 4
Q ss_pred ceeeeecHHHHHHHHHhccCCCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeec
Q 016003 160 REFCWLTQEDIIRFILSSISLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEIS 239 (397)
Q Consensus 160 ~~~~IITq~DIi~~l~~~~~~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is 239 (397)
+.+|++|+.|+++++.+... ...++.+ +|+++++++.+++++.+|++.|.++++ +.+||+ ++|+++|+||
T Consensus 126 ~~~Givt~~dl~~~~~~~~~-----~~~~v~~--~m~~~~~~v~~~~~l~~~~~~~~~~~~--~~~~Vv-~~~~~~Givt 195 (280)
T 3kh5_A 126 QLISLITERDVIRALLDKID-----ENEVIDD--YITRDVIVATPGERLKDVARTMVRNGF--RRLPVV-SEGRLVGIIT 195 (280)
T ss_dssp BEEEEEEHHHHHHHHGGGSC-----TTCBSGG--GCBCSCCCBCTTCBHHHHHHHHHHHTC--SEEEEE-ETTEEEEEEE
T ss_pred EEEEEEEHHHHHHHHhhcCC-----CCCCHHH--HhCCCCeEECCCCcHHHHHHHHHHcCC--CEEEEE-ECCEEEEEEE
Confidence 67899999999999864321 1235555 788999999999999999999999999 999999 6789999955
Q ss_pred cCcccCcchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhh
Q 016003 240 PSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATS 319 (397)
Q Consensus 240 ~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (397)
.+|++..+... + .... +... .. .+.
T Consensus 196 -------------------~~dl~~~~~~~------------~----~~~~----~~~~--~~--------------~~~ 220 (280)
T 3kh5_A 196 -------------------STDFIKLLGSD------------W----AFNH----MQTG--NV--------------REI 220 (280)
T ss_dssp -------------------HHHHHHHHTSH------------H----HHHH----HHSC--CT--------------HHH
T ss_pred -------------------HHHHHHHHhhh------------h----hhhh----hccc--ch--------------hhh
Confidence 55655533110 0 0000 0000 00 000
Q ss_pred ccccCCCccccccchhhhhcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHH
Q 016003 320 KLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVF 389 (397)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l 389 (397)
...+...+|..++++|++++++.+|+++|.+++++++||+|++|+++|+||++||++++
T Consensus 221 -----------~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 221 -----------TNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp -----------HHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred -----------hCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 01112346788999999999999999999999999999999989999999999999876
No 3
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=2.4e-33 Score=273.85 Aligned_cols=282 Identities=17% Similarity=0.191 Sum_probs=212.4
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc-
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD- 82 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~- 82 (397)
||.+.+|+|+|..+++++++++++|+.+|+++|.+++++++||||.+ .++|+|+|+..||+.++...
T Consensus 18 ~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~------------~~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 18 FIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSE------------ANKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETT------------TTEEEEEECHHHHHHHHHHHH
T ss_pred HHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCC------------CCeEEEEEEHHHHHHHHHHHh
Confidence 57789999999877789999999999999999999999999999963 36999999999999887531
Q ss_pred C---CCCChhhhhcCChhhh-------ccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhccccc
Q 016003 83 S---NSLSPSLALKQPVSVL-------LPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSS 151 (397)
Q Consensus 83 ~---~l~~~~~~~~~~V~~l-------m~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~ 151 (397)
. +........+.+++.+ |... ..++++.+++++.++++.|. +++++++|.++....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~----------- 152 (334)
T 2qrd_G 86 QSSSFPEAIAEIDKFRLLGLREVERKIGAIP--PETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGET----------- 152 (334)
T ss_dssp HHCSCGGGGGGGGSCBHHHHHHHHHHHTCSC--SSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTT-----------
T ss_pred hccCCccHHHHHhhhchhhHHHHHHhhccCC--CceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCc-----------
Confidence 0 0000001113333333 4322 22488999999999999998 799999988642100
Q ss_pred ccccCCCCceeeeecHHHHHHHHHhccCCCCCCccCCccccC-CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcC
Q 016003 152 SSLTNHNGREFCWLTQEDIIRFILSSISLFSPIPALSIDSLG-IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDS 230 (397)
Q Consensus 152 ~~~~~~~~~~~~IITq~DIi~~l~~~~~~l~~l~~~ti~~L~-~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~ 230 (397)
+....+|+||+.||++++..+.... .+...++++++ +|+++++++.+++++.+|++.|.++++ +++||+|+
T Consensus 153 -----~~~~~~Givt~~dl~~~~~~~~~~~-~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~--~~~~Vvd~ 224 (334)
T 2qrd_G 153 -----GSEMIVSVLTQYRILKFISMNCKET-AMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNI--SAVPIVNS 224 (334)
T ss_dssp -----TEEEEEEEEEHHHHHHHHHHHCGGG-GGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTC--SEEEEECT
T ss_pred -----CccceEEEeeHHHHHHHHHhhccch-hhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCC--cEEEEEcC
Confidence 0012789999999999997643221 22356777765 588999999999999999999999999 99999999
Q ss_pred CCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCC
Q 016003 231 DGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSS 310 (397)
Q Consensus 231 ~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (397)
+|+++|+|| .+|++.++..+ .....
T Consensus 225 ~~~~~Giit-------------------~~dl~~~~~~~-----------------~~~~~------------------- 249 (334)
T 2qrd_G 225 EGTLLNVYE-------------------SVDVMHLIQDG-----------------DYSNL------------------- 249 (334)
T ss_dssp TCBEEEEEE-------------------THHHHHHHTTS-----------------CGGGG-------------------
T ss_pred CCcEEEEEE-------------------HHHHHHHhhcc-----------------ccccc-------------------
Confidence 999999955 55555432110 00000
Q ss_pred CCccchhhhccccCCCccccccchhhhhcC------CccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHH
Q 016003 311 SDEESTATSKLTRSGKHSRSMSYSARMVRR------AEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSD 384 (397)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~D 384 (397)
..+...+|. .++++|++++++.+++++|.+++++++||||++|+++|+||++|
T Consensus 250 ---------------------~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~d 308 (334)
T 2qrd_G 250 ---------------------DLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLAD 308 (334)
T ss_dssp ---------------------GSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHH
T ss_pred ---------------------cCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHH
Confidence 000112233 48899999999999999999999999999999899999999999
Q ss_pred HHHHHHHHHh
Q 016003 385 LLKVFRKHLE 394 (397)
Q Consensus 385 Il~~l~~~~~ 394 (397)
|++++.++.+
T Consensus 309 il~~~~~~~~ 318 (334)
T 2qrd_G 309 ILNYIIYDKT 318 (334)
T ss_dssp HHHHHHSCCC
T ss_pred HHHHHHhccc
Confidence 9999976543
No 4
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=3.9e-33 Score=272.19 Aligned_cols=282 Identities=18% Similarity=0.236 Sum_probs=216.5
Q ss_pred cccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc
Q 016003 3 VSLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD 82 (397)
Q Consensus 3 ~~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~ 82 (397)
.||...+|+|+|..+++++++++++|+.+|+++|.+++++++||++.+ .++++|+|+..|++.++...
T Consensus 30 ~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~------------~~~~vGivt~~Dll~~l~~~ 97 (330)
T 2v8q_E 30 TFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSK------------KQSFVGMLTITDFINILHRY 97 (330)
T ss_dssp HHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETT------------TTEEEEEEEHHHHHHHHHHH
T ss_pred HHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCC------------CCeEEEEEEHHHHHHHHHHH
Confidence 467888999999777889999999999999999999999999999964 26899999999999877531
Q ss_pred ----C-CCCCh----hhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccc
Q 016003 83 ----S-NSLSP----SLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSS 152 (397)
Q Consensus 83 ----~-~l~~~----~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~ 152 (397)
. ..... ...+..+++++|.. +++++.+++++.+|++.|. +++++++|.+++
T Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~im~~----~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--------------- 158 (330)
T 2v8q_E 98 YKSALVQIYELEEHKIETWREVYLQDSFK----PLVCISPNASLFDAVSSLIRNKIHRLPVIDPE--------------- 158 (330)
T ss_dssp HHHHTTTCCCGGGCBHHHHHHHHSSSSCC----CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTT---------------
T ss_pred HhccccchhHHhhccHHHHHHHHhhcccC----CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCC---------------
Confidence 0 11110 01112234556654 3899999999999999998 799999988531
Q ss_pred cccCCCCceeeeecHHHHHHHHHhccCC--CCCCccCCccccCCCC-cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEc
Q 016003 153 SLTNHNGREFCWLTQEDIIRFILSSISL--FSPIPALSIDSLGIIS-TDVVAVDYHSPASLALEAISRSLFDQTSVAVVD 229 (397)
Q Consensus 153 ~~~~~~~~~~~IITq~DIi~~l~~~~~~--l~~l~~~ti~~L~~~~-~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd 229 (397)
.++.+|+||+.|+++++.++... ...+...++.++.+|+ ++++++.+++++.+|++.|.++++ +.+||+|
T Consensus 159 -----~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~--~~~~Vvd 231 (330)
T 2v8q_E 159 -----SGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRV--SALPVVD 231 (330)
T ss_dssp -----TCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCC--SEEEEEC
T ss_pred -----CCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCC--CeEEEEC
Confidence 24678999999999999765332 2334567888887887 889999999999999999999999 9999999
Q ss_pred CCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCC
Q 016003 230 SDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSS 309 (397)
Q Consensus 230 ~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (397)
++|+++|+||..||.+ .+.... +..+ ...+..+ +.
T Consensus 232 ~~~~l~Giit~~dl~~-------------------~~~~~~-~~~~---------~~~v~~~---~~------------- 266 (330)
T 2v8q_E 232 EKGRVVDIYSKFDVIN-------------------LAAEKT-YNNL---------DVSVTKA---LQ------------- 266 (330)
T ss_dssp TTSBEEEEEEGGGTGG-------------------GGGSSC-CCCC---------SSBHHHH---GG-------------
T ss_pred CCCcEEEEEEHHHHHH-------------------HHhccc-cccc---------cCcHHHH---Hh-------------
Confidence 9999999976555544 221000 0000 0000000 00
Q ss_pred CCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHH
Q 016003 310 SSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVF 389 (397)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l 389 (397)
. ...|+.++++|++++++.+++++|.+++++++||+|++|+++|+||.+||++++
T Consensus 267 --------------~-----------~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~ 321 (330)
T 2v8q_E 267 --------------H-----------RSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQAL 321 (330)
T ss_dssp --------------G-----------CCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred --------------c-----------cccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHH
Confidence 0 012467999999999999999999999999999999989999999999999998
Q ss_pred HHH
Q 016003 390 RKH 392 (397)
Q Consensus 390 ~~~ 392 (397)
.++
T Consensus 322 ~~~ 324 (330)
T 2v8q_E 322 VLT 324 (330)
T ss_dssp HSS
T ss_pred Hhh
Confidence 764
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=1.9e-33 Score=270.09 Aligned_cols=267 Identities=15% Similarity=0.170 Sum_probs=212.4
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
....+|+|+|. ++++++++++|+.+|+++|.++++.++||+| + +++|++|..||+.++.....
T Consensus 17 ~~~~~V~dim~--~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d--~-------------~l~GivT~~Di~~~~~~~~~ 79 (296)
T 3ddj_A 17 FQGMNIETLMI--KNPPILSKEDRLGSAFKKINEGGIGRIIVAN--E-------------KIEGLLTTRDLLSTVESYCK 79 (296)
T ss_dssp TCCSSGGGTCE--ESCCEECTTSBHHHHHHHTTGGGCCEEEEES--S-------------SEEEEEEHHHHHGGGTTCC-
T ss_pred hcccCHHHhcc--CCCcEECCCccHHHHHHHHHHCCCceEEEEC--C-------------eEEEEEeHHHHHHHhccccc
Confidence 34678999995 5789999999999999999999999999999 2 69999999999999864221
Q ss_pred CCC----hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCC
Q 016003 85 SLS----PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNG 159 (397)
Q Consensus 85 l~~----~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
... .....+.+|+++|... ++++.+++++.+|++.|. +++++++|.+++ +
T Consensus 80 ~~~~~~~~~~~~~~~v~~im~~~----~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~---------------------~ 134 (296)
T 3ddj_A 80 DSCSQGDLYHISTTPIIDYMTPN----PVTVYNTSDEFTAINIMVTRNFGSLPVVDIN---------------------D 134 (296)
T ss_dssp --CCHHHHHHHHTSBGGGTSEES----CCCEETTSCHHHHHHHHHHHTCSEEEEECTT---------------------S
T ss_pred ccccchhhHHHhcccHHHhccCC----CEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC---------------------C
Confidence 111 1123468899999754 889999999999999999 799999998532 4
Q ss_pred ceeeeecHHHHHHHHHhccCCCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeec
Q 016003 160 REFCWLTQEDIIRFILSSISLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEIS 239 (397)
Q Consensus 160 ~~~~IITq~DIi~~l~~~~~~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is 239 (397)
+++|+||..|+++++... ....++++ +|+++++++.+++++.+|++.|.++++ +.+||+|++|+++|+||
T Consensus 135 ~lvGivt~~dl~~~~~~~------~~~~~v~~--~m~~~~~~v~~~~~l~~~~~~m~~~~~--~~~~Vvd~~~~~~Givt 204 (296)
T 3ddj_A 135 KPVGIVTEREFLLLYKDL------DEIFPVKV--FMSTKVQTIYKEVRLDQAVKLMLRRGF--RRLPVIDDDNKVVGIVT 204 (296)
T ss_dssp CEEEEEEHHHHGGGGGGS------CCCCBHHH--HSBCSCCCEETTSBHHHHHHHHHHHTC--SEEEEECTTSCEEEEEE
T ss_pred cEEEEEeHHHHHHhhhcc------cccccHHH--hhcCCCeEECCCCCHHHHHHHHHHcCC--CEEEEEcCCCEEEEEEE
Confidence 678999999999876432 12446666 688999999999999999999999999 99999999999999955
Q ss_pred cCcccCcchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhh
Q 016003 240 PSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATS 319 (397)
Q Consensus 240 ~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (397)
.+|++..+.. . +..+ .. +..
T Consensus 205 -------------------~~dl~~~~~~-------------~-----~~~~----~~-------------------~~~ 224 (296)
T 3ddj_A 205 -------------------VVNAIKQLAK-------------A-----VDKL----DP-------------------DYF 224 (296)
T ss_dssp -------------------HHHHHHHHHH-------------H-----HHHT----CT-------------------HHH
T ss_pred -------------------HHHHHHHHHH-------------H-----Hhhc----Ch-------------------hhh
Confidence 5666553210 0 0000 00 000
Q ss_pred ccccCCCccccccchhhhhcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHh
Q 016003 320 KLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLE 394 (397)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~ 394 (397)
. ......+|..++++|++++++.+++++|.+++++++||+|++|+++|+||++||++++.+++.
T Consensus 225 ---~--------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~~ 288 (296)
T 3ddj_A 225 ---Y--------GKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHILV 288 (296)
T ss_dssp ---H--------TCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHH
T ss_pred ---c--------CcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHhc
Confidence 0 011234678899999999999999999999999999999988999999999999999988754
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=1.7e-32 Score=260.81 Aligned_cols=277 Identities=23% Similarity=0.233 Sum_probs=185.7
Q ss_pred chhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCC
Q 016003 8 DEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLS 87 (397)
Q Consensus 8 ~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~ 87 (397)
++|+|+|. ++++++++++|+.+|+++|.++++.++||+|. +++++|+++..|++..+.
T Consensus 1 m~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-------------~~~~~Giv~~~dl~~~~~------- 58 (282)
T 2yzq_A 1 MRVKTIMT--QNPVTITLPATRNYALELFKKYKVRSFPVVNK-------------EGKLVGIISVKRILVNPD------- 58 (282)
T ss_dssp CBHHHHSE--ESCCCEESSCC------------CCEEEEECT-------------TCCEEEEEESSCC------------
T ss_pred CchHHhcc--CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-------------CCcEEEEEEHHHHHhhhc-------
Confidence 47899995 67899999999999999999999999999996 368999999999986542
Q ss_pred hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeec
Q 016003 88 PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLT 166 (397)
Q Consensus 88 ~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IIT 166 (397)
+.+++++|... ++++.+++++.+|++.|. ++.++++|++++ ++.+|+||
T Consensus 59 -----~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~---------------------~~~~Giit 108 (282)
T 2yzq_A 59 -----EEQLAMLVKRD----VPVVKENDTLKKAAKLMLEYDYRRVVVVDSK---------------------GKPVGILT 108 (282)
T ss_dssp ----------CCCBSC----CCEEETTSBHHHHHHHHHHHTCSEEEEECTT---------------------SCEEEEEE
T ss_pred -----cCCHHHHcCCC----CcEECCCCcHHHHHHHHHHcCCCEEEEEcCC---------------------CEEEEEEE
Confidence 35788899654 789999999999999999 799999887532 46789999
Q ss_pred HHHHHH-HHHhccCCCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccC
Q 016003 167 QEDIIR-FILSSISLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGC 245 (397)
Q Consensus 167 q~DIi~-~l~~~~~~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~ 245 (397)
+.|+++ ++.+. . .....++++ +|+++++++.+++++.+|++.|.++++ +++||+|++|+++|+||..||.+
T Consensus 109 ~~di~~~~~~~~-~---~~~~~~v~~--~m~~~~~~v~~~~~l~~~~~~~~~~~~--~~l~Vvd~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 109 VGDIIRRYFAKS-E---KYKGVEIEP--YYQRYVSIVWEGTPLKAALKALLLSNS--MALPVVDSEGNLVGIVDETDLLR 180 (282)
T ss_dssp HHHHHHHTTTTC-S---GGGGCBSTT--TSBSCCCCEETTSBHHHHHHHHHTCSS--SEEEEECTTSCEEEEEEGGGGGG
T ss_pred HHHHHHHHHhcc-C---CcccCcHHH--HhCCCCEEECCCCCHHHHHHHHHHcCC--cEEEEEcCCCeEEEEEEHHHHhh
Confidence 999998 76532 1 112445554 788899999999999999999999999 99999999999999988777763
Q ss_pred cchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCC
Q 016003 246 CDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSG 325 (397)
Q Consensus 246 ~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (397)
...... . +...++ .+.. .+ .++....... .+..
T Consensus 181 ~~~~~~-~---~~~~~~-~~~~------~~-----~~~~~~~~~~---~~~~---------------------------- 213 (282)
T 2yzq_A 181 DSEIVR-I---MKSTEL-AASS------EE-----EWILESHPTL---LFEK---------------------------- 213 (282)
T ss_dssp CGGGCC--------------------------------------------------------------------------
T ss_pred hhhhhh-h---hccchh-hhhh------hh-----hhhcccchHH---HHhH----------------------------
Confidence 110000 0 000000 0000 00 0000000000 0000
Q ss_pred CccccccchhhhhcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 326 KHSRSMSYSARMVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
........+...+|+.+++||+|++++.+|+++|.+++++++||+|++|+++|+||++||++++.+
T Consensus 214 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 214 FELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp -----CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred hhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 000000122345788999999999999999999999999999999998899999999999998754
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.88 E-value=1.8e-22 Score=193.50 Aligned_cols=193 Identities=17% Similarity=0.156 Sum_probs=155.1
Q ss_pred hhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHH
Q 016003 91 ALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQED 169 (397)
Q Consensus 91 ~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~D 169 (397)
....+|+++|... ++++.+++++.+|++.|. +++++++|.+ ++++|++|+.|
T Consensus 17 ~~~~~V~dim~~~----~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-----------------------~~l~GivT~~D 69 (296)
T 3ddj_A 17 FQGMNIETLMIKN----PPILSKEDRLGSAFKKINEGGIGRIIVAN-----------------------EKIEGLLTTRD 69 (296)
T ss_dssp TCCSSGGGTCEES----CCEECTTSBHHHHHHHTTGGGCCEEEEES-----------------------SSEEEEEEHHH
T ss_pred hcccCHHHhccCC----CcEECCCccHHHHHHHHHHCCCceEEEEC-----------------------CeEEEEEeHHH
Confidence 3467899999754 899999999999999999 7899998875 25688999999
Q ss_pred HHHHHHhccC------CCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcc
Q 016003 170 IIRFILSSIS------LFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTL 243 (397)
Q Consensus 170 Ii~~l~~~~~------~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl 243 (397)
|++++..... .+......++++ +|+++++++.+++++.+|+++|.++++ +++||+|++|+++|+
T Consensus 70 i~~~~~~~~~~~~~~~~~~~~~~~~v~~--im~~~~~~v~~~~~~~~a~~~m~~~~~--~~lpVvd~~~~lvGi------ 139 (296)
T 3ddj_A 70 LLSTVESYCKDSCSQGDLYHISTTPIID--YMTPNPVTVYNTSDEFTAINIMVTRNF--GSLPVVDINDKPVGI------ 139 (296)
T ss_dssp HHGGGTTCC---CCHHHHHHHHTSBGGG--TSEESCCCEETTSCHHHHHHHHHHHTC--SEEEEECTTSCEEEE------
T ss_pred HHHHhcccccccccchhhHHHhcccHHH--hccCCCEEEcCCCCHHHHHHHHHHcCC--CEEEEEcCCCcEEEE------
Confidence 9998753211 011122456666 799999999999999999999999999 999999999999999
Q ss_pred cCcchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhcccc
Q 016003 244 GCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTR 323 (397)
Q Consensus 244 ~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (397)
++.+|++..+... + .
T Consensus 140 -------------vt~~dl~~~~~~~--------------------------------~--------------------~ 154 (296)
T 3ddj_A 140 -------------VTEREFLLLYKDL--------------------------------D--------------------E 154 (296)
T ss_dssp -------------EEHHHHGGGGGGS--------------------------------C--------------------C
T ss_pred -------------EeHHHHHHhhhcc--------------------------------c--------------------c
Confidence 4566666532100 0 0
Q ss_pred CCCccccccchhhhhcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 324 SGKHSRSMSYSARMVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
..+...+|..+++++.+++++.++++.|.+++++++||+|++|+++|+||..||++++.+..
T Consensus 155 --------~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~ 216 (296)
T 3ddj_A 155 --------IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAV 216 (296)
T ss_dssp --------CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred --------cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHH
Confidence 00122457789999999999999999999999999999998899999999999999987543
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.88 E-value=1.6e-22 Score=191.20 Aligned_cols=187 Identities=18% Similarity=0.204 Sum_probs=154.2
Q ss_pred cchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCC
Q 016003 7 ADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSL 86 (397)
Q Consensus 7 ~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~ 86 (397)
..+++++|. ++++++++++++.+|++.|.++++.++||+|. +++++|+++..|++.++....
T Consensus 83 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~Givt~~dl~~~~~~~~--- 144 (280)
T 3kh5_A 83 NEPVREIME--ENVITLKENADIDEAIETFLTKNVGGAPIVND-------------ENQLISLITERDVIRALLDKI--- 144 (280)
T ss_dssp TSBGGGTSB--CSCCCEETTCBHHHHHHHHHHTTCSEEEEECT-------------TCBEEEEEEHHHHHHHHGGGS---
T ss_pred hhhHHHhcC--CCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC-------------CCEEEEEEEHHHHHHHHhhcC---
Confidence 568999995 57899999999999999999999999999986 368999999999999887532
Q ss_pred ChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeee
Q 016003 87 SPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWL 165 (397)
Q Consensus 87 ~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~II 165 (397)
....+++++|... ++++.+++++.++++.|. +++++++|. ++ ++.+|+|
T Consensus 145 ----~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~---------------------~~~~Giv 194 (280)
T 3kh5_A 145 ----DENEVIDDYITRD----VIVATPGERLKDVARTMVRNGFRRLPVV-SE---------------------GRLVGII 194 (280)
T ss_dssp ----CTTCBSGGGCBCS----CCCBCTTCBHHHHHHHHHHHTCSEEEEE-ET---------------------TEEEEEE
T ss_pred ----CCCCCHHHHhCCC----CeEECCCCcHHHHHHHHHHcCCCEEEEE-EC---------------------CEEEEEE
Confidence 1235789999654 889999999999999999 799999987 32 3578999
Q ss_pred cHHHHHHHHHhcc-------CCCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEee
Q 016003 166 TQEDIIRFILSSI-------SLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEI 238 (397)
Q Consensus 166 Tq~DIi~~l~~~~-------~~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~i 238 (397)
|..|+++++.+.. +........++.+ +|+++++++++++++.+|++.|.++++ +.+||+|++|+++|+|
T Consensus 195 t~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~m~~~~~~v~~~~~l~~a~~~m~~~~~--~~l~Vvd~~g~~~Giv 270 (280)
T 3kh5_A 195 TSTDFIKLLGSDWAFNHMQTGNVREITNVRMEE--IMKRDVITAKEGDKLKKIAEIMVTNDI--GALPVVDENLRIKGII 270 (280)
T ss_dssp EHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHH--HSBSSCCCBCTTCBHHHHHHHHHHHTC--CEEEEECTTCBEEEEE
T ss_pred EHHHHHHHHhhhhhhhhhcccchhhhhCCcHHH--HhcCCCEEECCCCCHHHHHHHHHHCCC--CEEEEECCCCeEEEEE
Confidence 9999999985321 0111113456665 788999999999999999999999999 9999999999999997
Q ss_pred ccCcccC
Q 016003 239 SPSTLGC 245 (397)
Q Consensus 239 s~~dl~~ 245 (397)
|.+||.+
T Consensus 271 t~~dil~ 277 (280)
T 3kh5_A 271 TEKDVLK 277 (280)
T ss_dssp EHHHHGG
T ss_pred eHHHHHH
Confidence 6555544
No 9
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.86 E-value=4.6e-22 Score=176.14 Aligned_cols=148 Identities=21% Similarity=0.231 Sum_probs=105.9
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAY 265 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~ 265 (397)
..+|++ +|+++++++.+++++.+|+++|.++++ +++||||++|+++|+||.+||.+.... .........
T Consensus 17 ~~~V~d--iM~~~v~~v~~~~tl~~a~~~m~~~~~--~~~pVvd~~g~lvGiit~~Dll~~~~~-------~~~~~~~~~ 85 (170)
T 4esy_A 17 QVPIRD--ILTSPVVTVREDDTLDAVAKTMLEHQI--GCAPVVDQNGHLVGIITESDFLRGSIP-------FWIYEASEI 85 (170)
T ss_dssp TSBGGG--GCCSCCCCEETTSBHHHHHHHHHHTTC--SEEEEECTTSCEEEEEEGGGGGGGTCC-------TTHHHHHHH
T ss_pred CCCHHH--hcCCCCcEECCcCcHHHHHHHHHHcCC--eEEEEEcCCccEEEEEEHHHHHHHHhh-------ccccchhhh
Confidence 345666 799999999999999999999999999 999999999999999887777662200 000000000
Q ss_pred hccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEE
Q 016003 266 IDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIV 345 (397)
Q Consensus 266 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it 345 (397)
.... ........... . . ...+...+|+++++|
T Consensus 86 ~~~~----------------~~~~~~~~~~~---------------------~-----~------~~~~v~~im~~~~~t 117 (170)
T 4esy_A 86 LSRA----------------IPAPEVEHLFE---------------------T-----G------RKLTASAVMTQPVVT 117 (170)
T ss_dssp HTTT----------------SCHHHHHHHHH---------------------H-----H------TTCBHHHHCBCCSCC
T ss_pred hhhc----------------cchhhHHhhhc---------------------c-----c------cccchhhhcccCccc
Confidence 0000 00000000000 0 0 011234578999999
Q ss_pred eCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 346 CHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 346 ~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
|++++++.+|+.+|.++++|++||+|+ |+++||||++||+++++.+.
T Consensus 118 v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGivt~~Dil~~l~~~~ 164 (170)
T 4esy_A 118 AAPEDSVGSIADQMRRHGIHRIPVVQD-GVPVGIVTRRDLLKLLLLEE 164 (170)
T ss_dssp BCTTSBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHTTTSCCC-
T ss_pred CCcchhHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhcc
Confidence 999999999999999999999999985 89999999999999987653
No 10
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.85 E-value=1.6e-21 Score=184.90 Aligned_cols=190 Identities=19% Similarity=0.228 Sum_probs=146.1
Q ss_pred ccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHH-HHhhcCC
Q 016003 6 LADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVIC-YLCKDSN 84 (397)
Q Consensus 6 ~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~-~l~~~~~ 84 (397)
...+++++|. ++++++++++++.+|++.|.++++..+||+|.+ ++++|+++..|++. ++.++.
T Consensus 58 ~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-------------~~~~Giit~~di~~~~~~~~~- 121 (282)
T 2yzq_A 58 DEEQLAMLVK--RDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSK-------------GKPVGILTVGDIIRRYFAKSE- 121 (282)
T ss_dssp ------CCCB--SCCCEEETTSBHHHHHHHHHHHTCSEEEEECTT-------------SCEEEEEEHHHHHHHTTTTCS-
T ss_pred ccCCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-------------CEEEEEEEHHHHHHHHHhccC-
Confidence 3567889984 458899999999999999999999999999963 68999999999998 765421
Q ss_pred CCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceee
Q 016003 85 SLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFC 163 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
.....+++++|... ++++.+++++.++++.|. +++++++|.+++ ++.+|
T Consensus 122 -----~~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~---------------------~~~~G 171 (282)
T 2yzq_A 122 -----KYKGVEIEPYYQRY----VSIVWEGTPLKAALKALLLSNSMALPVVDSE---------------------GNLVG 171 (282)
T ss_dssp -----GGGGCBSTTTSBSC----CCCEETTSBHHHHHHHHHTCSSSEEEEECTT---------------------SCEEE
T ss_pred -----CcccCcHHHHhCCC----CEEECCCCCHHHHHHHHHHcCCcEEEEEcCC---------------------CeEEE
Confidence 22356889999644 889999999999999999 789999887532 46789
Q ss_pred eecHHHHH------HHHHhcc---------------CC-C----CCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHh
Q 016003 164 WLTQEDII------RFILSSI---------------SL-F----SPIPALSIDSLGIISTDVVAVDYHSPASLALEAISR 217 (397)
Q Consensus 164 IITq~DIi------~~l~~~~---------------~~-l----~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~ 217 (397)
+||..|++ +++..+. .. + ......++++ +|+++++++++++++.+|+++|.+
T Consensus 172 iit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--im~~~~~~v~~~~~l~~a~~~m~~ 249 (282)
T 2yzq_A 172 IVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAE--IMTRDVIVATPHMTVHEVALKMAK 249 (282)
T ss_dssp EEEGGGGGGCGGGCC--------------------------------CCCBGGG--TCBSSCCCBCTTSBHHHHHHHHHH
T ss_pred EEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHH--hcCCCCceeCCCCCHHHHHHHHHH
Confidence 99999999 6653100 00 0 1223556665 899999999999999999999999
Q ss_pred cCCCCCEEEEEcCCCcEEEeeccCcccC
Q 016003 218 SLFDQTSVAVVDSDGFLIGEISPSTLGC 245 (397)
Q Consensus 218 ~~i~~s~vpVVd~~g~lvG~is~~dl~~ 245 (397)
+++ +.+||||++|+++|+||.+||.+
T Consensus 250 ~~~--~~lpVvd~~~~lvGiit~~Dil~ 275 (282)
T 2yzq_A 250 YSI--EQLPVIRGEGDLIGLIRDFDLLK 275 (282)
T ss_dssp HTC--SEEEEEETTTEEEEEEEHHHHGG
T ss_pred cCc--ceeEEECCCCCEEEEEeHHHHHH
Confidence 999 99999998889999966544444
No 11
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.83 E-value=1.8e-20 Score=181.71 Aligned_cols=181 Identities=15% Similarity=0.185 Sum_probs=145.4
Q ss_pred CCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChhhhhcCCh
Q 016003 17 KPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSLALKQPV 96 (397)
Q Consensus 17 k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~~~~~~~V 96 (397)
.++++++++++++.+|++.|.++++..+||+|..+.+ .+++++|+++..|++.++..... .....+.+|
T Consensus 121 ~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~--------~~~~l~Givt~~di~~~l~~~~~---~~~~~~~~v 189 (323)
T 3t4n_C 121 QLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEET--------HREIVVSVLTQYRILKFVALNCR---ETHFLKIPI 189 (323)
T ss_dssp ---CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTT--------CCEEEEEEEEHHHHHHHHHHHCG---GGGGCCSBG
T ss_pred CCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCC--------CccceEEEecHHHHHHHHHhcCC---chhhhhCcH
Confidence 3678999999999999999999999999999974210 01149999999999999875321 123456789
Q ss_pred hhh---ccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHHHHH
Q 016003 97 SVL---LPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIR 172 (397)
Q Consensus 97 ~~l---m~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~ 172 (397)
+++ |... ++++.+++++.+|++.|. +++++++|++++ ++.+|+||..|+++
T Consensus 190 ~~~~~~m~~~----~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~---------------------~~~~Giit~~dl~~ 244 (323)
T 3t4n_C 190 GDLNIITQDN----MKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN---------------------GYLINVYEAYDVLG 244 (323)
T ss_dssp GGTTCSBCTT----CCCBCTTSBHHHHHHHHHHHTCSEEEEECTT---------------------CBEEEEEETTHHHH
T ss_pred HHcCCCCCCC----cEEECCCCcHHHHHHHHHHcCCCEEEEECCC---------------------CeEEEEEeHHHHHH
Confidence 999 7544 899999999999999999 799999998632 46789999999999
Q ss_pred HHHhccCCCCCCccCCccccCCCCc------CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeecc
Q 016003 173 FILSSISLFSPIPALSIDSLGIIST------DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISP 240 (397)
Q Consensus 173 ~l~~~~~~l~~l~~~ti~~L~~~~~------~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~ 240 (397)
++.+... .....++++ +|++ +++++.+++++.+|++.|.++++ ..+||||++|+++|+||.
T Consensus 245 ~~~~~~~---~~~~~~v~~--~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~--~~l~Vvd~~~~l~Giit~ 311 (323)
T 3t4n_C 245 LIKGGIY---NDLSLSVGE--ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARV--HRFFVVDDVGRLVGVLTL 311 (323)
T ss_dssp HHHTTHH---HHTTSBHHH--HGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCC--CEEEEECTTSBEEEEEEH
T ss_pred HHhhchh---hhccCCHHH--HHhhccccCCCCEEECCCCCHHHHHHHHHHhCC--CEEEEECCCCcEEEEEEH
Confidence 9864321 112446665 6776 89999999999999999999999 999999999999999553
No 12
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.80 E-value=8.7e-20 Score=177.54 Aligned_cols=186 Identities=15% Similarity=0.134 Sum_probs=145.3
Q ss_pred hhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChhh
Q 016003 11 SDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSL 90 (397)
Q Consensus 11 ~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~~ 90 (397)
+++| .++++++++++++.+|++.|.++++..+||+|.+ .++++|+|+..|++.++...........
T Consensus 121 ~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~------------~~~~~Givt~~dl~~~~~~~~~~~~~~~ 186 (330)
T 2v8q_E 121 LQDS--FKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPE------------SGNTLYILTHKRILKFLKLFITEFPKPE 186 (330)
T ss_dssp SSSS--CCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTT------------TCCEEEEECHHHHHHHHHHHSCSSSCCG
T ss_pred hhcc--cCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCC------------CCcEEEEEcHHHHHHHHHHHhhccCchh
Confidence 4555 4679999999999999999999999999999961 2689999999999999865211111123
Q ss_pred hhcCChhhh--ccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecH
Q 016003 91 ALKQPVSVL--LPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQ 167 (397)
Q Consensus 91 ~~~~~V~~l--m~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq 167 (397)
.+..+++++ |. ..+++++.+++++.++++.|. +++++++|.+++ ++.+|+||.
T Consensus 187 ~~~~~v~~~~v~~---~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~---------------------~~l~Giit~ 242 (330)
T 2v8q_E 187 FMSKSLEELQIGT---YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK---------------------GRVVDIYSK 242 (330)
T ss_dssp GGGSBHHHHTCSB---CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT---------------------SBEEEEEEG
T ss_pred hhcCCHHHhcccC---cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCC---------------------CcEEEEEEH
Confidence 456778887 43 134889999999999999999 789999988532 467899999
Q ss_pred HHHHHHHHhccCCCCCCccCCcccc----CCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeec
Q 016003 168 EDIIRFILSSISLFSPIPALSIDSL----GIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEIS 239 (397)
Q Consensus 168 ~DIi~~l~~~~~~l~~l~~~ti~~L----~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is 239 (397)
.|+++++.+.. +. ....++.++ ..|+++++++.+++++.+|++.|.++++ ..+||||++|+++|+||
T Consensus 243 ~dl~~~~~~~~--~~-~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~--~~l~Vvd~~g~l~Giit 313 (330)
T 2v8q_E 243 FDVINLAAEKT--YN-NLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEV--HRLVVVDEHDVVKGIVS 313 (330)
T ss_dssp GGTGGGGGSSC--CC-CCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTC--SEEEEECTTSBEEEEEE
T ss_pred HHHHHHHhccc--cc-cccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCC--cEEEEEcCCCcEEEEEe
Confidence 99998765321 11 113455552 1236899999999999999999999999 99999999999999955
No 13
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.80 E-value=4e-19 Score=172.97 Aligned_cols=183 Identities=14% Similarity=0.123 Sum_probs=143.4
Q ss_pred hcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChhhhhc
Q 016003 14 CLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSLALK 93 (397)
Q Consensus 14 ~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~~~~~ 93 (397)
|....+++++++++|+.+|++.|.++++..+||+|..+.. ..+.++|+++..||+.++..+.. .....+
T Consensus 113 m~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~--------~~~~~~Givt~~dl~~~~~~~~~---~~~~~~ 181 (334)
T 2qrd_G 113 GAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGET--------GSEMIVSVLTQYRILKFISMNCK---ETAMLR 181 (334)
T ss_dssp TCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTT--------TEEEEEEEEEHHHHHHHHHHHCG---GGGGCC
T ss_pred ccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCc--------CccceEEEeeHHHHHHHHHhhcc---chhhhh
Confidence 4333345999999999999999999999999999963210 00129999999999999875211 112346
Q ss_pred CChhhh---ccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHH
Q 016003 94 QPVSVL---LPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQED 169 (397)
Q Consensus 94 ~~V~~l---m~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~D 169 (397)
.+|+++ |... ++++.+++++.+|++.|. +++++++|++++ ++.+|+||..|
T Consensus 182 ~~v~~l~~~m~~~----~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~---------------------~~~~Giit~~d 236 (334)
T 2qrd_G 182 VPLNQMTIGTWSN----LATASMETKVYDVIKMLAEKNISAVPIVNSE---------------------GTLLNVYESVD 236 (334)
T ss_dssp CBGGGSSCSBCSS----CCCBCTTSBHHHHHHHHHHHTCSEEEEECTT---------------------CBEEEEEETHH
T ss_pred CcHHHhCCcccCC----ceEECCCCcHHHHHHHHHHcCCcEEEEEcCC---------------------CcEEEEEEHHH
Confidence 788885 6544 889999999999999999 789999888532 46789999999
Q ss_pred HHHHHHhccCCCCCCccCCccccCCCCc------CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeec
Q 016003 170 IIRFILSSISLFSPIPALSIDSLGIIST------DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEIS 239 (397)
Q Consensus 170 Ii~~l~~~~~~l~~l~~~ti~~L~~~~~------~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is 239 (397)
+++++.+... .....++.+ +|++ +++++++++++.+|++.|.++++ ..+||||++|+++|+||
T Consensus 237 l~~~~~~~~~---~~~~~~v~~--~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~--~~l~Vvd~~g~l~Giit 305 (334)
T 2qrd_G 237 VMHLIQDGDY---SNLDLSVGE--ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRV--HRLFVVDENLKLEGILS 305 (334)
T ss_dssp HHHHHTTSCG---GGGGSBHHH--HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCC--CEEEEECTTCBEEEEEE
T ss_pred HHHHhhcccc---ccccCcHHH--HHhcccccCCCCEEECCCCcHHHHHHHHHHcCC--CEEEEECCCCeEEEEEe
Confidence 9998854211 112455655 6773 89999999999999999999999 99999999999999954
No 14
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.76 E-value=4.1e-18 Score=146.79 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=103.6
Q ss_pred CccCCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC-CcEEEeeccCcccCcchhHHHHHhhcChh
Q 016003 184 IPALSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD-GFLIGEISPSTLGCCDETVAAAITTLSAG 260 (397)
Q Consensus 184 l~~~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~-g~lvG~is~~dl~~~~~~~~~~~~~ls~~ 260 (397)
+...++++ +|++ +++++.+++++.+|++.|.++++ +++||+|++ |+++|+ ++.+
T Consensus 20 l~~~~v~d--iM~~~~~~~~v~~~~~~~~a~~~m~~~~~--~~~pVvd~~~~~lvGi-------------------vt~~ 76 (148)
T 3lv9_A 20 FEEKKIRE--IMVPRTDMVCIYESDSEEKILAILKEEGV--TRYPVCRKNKDDILGF-------------------VHIR 76 (148)
T ss_dssp GGTCBGGG--TSEETTTCCCEETTCCHHHHHHHHHHSCC--SEEEEESSSTTSEEEE-------------------EEHH
T ss_pred cCCCCHHH--ccccHHHeEEECCCCCHHHHHHHHHHCCC--CEEEEEcCCCCcEEEE-------------------EEHH
Confidence 34566766 7998 89999999999999999999999 999999988 899999 5567
Q ss_pred hhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcC
Q 016003 261 DLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRR 340 (397)
Q Consensus 261 Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (397)
|++..+.. .. . .. ...+|
T Consensus 77 dl~~~~~~-----------------~~--------~----------------------------~~--------v~~~m- 94 (148)
T 3lv9_A 77 DLYNQKIN-----------------EN--------K----------------------------IE--------LEEIL- 94 (148)
T ss_dssp HHHHHHHH-----------------HS--------C----------------------------CC--------GGGTC-
T ss_pred HHHHHHhc-----------------CC--------C----------------------------cc--------HHHhc-
Confidence 77652210 00 0 00 11346
Q ss_pred CccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 341 AEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 341 ~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
.++++|++++++.+++.+|.+++++++||+|++|+++|+||+.||++++..++
T Consensus 95 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~i 147 (148)
T 3lv9_A 95 RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI 147 (148)
T ss_dssp BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHTC
T ss_pred CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCcC
Confidence 78999999999999999999999999999999999999999999999998754
No 15
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.75 E-value=5.8e-18 Score=142.71 Aligned_cols=123 Identities=22% Similarity=0.313 Sum_probs=97.8
Q ss_pred cCCccccCCCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC-CcEEEeeccCcccCcchhHHHHHhhcChhhh
Q 016003 186 ALSIDSLGIIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD-GFLIGEISPSTLGCCDETVAAAITTLSAGDL 262 (397)
Q Consensus 186 ~~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~-g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl 262 (397)
..++++ +|+ ++++++.+++++.+|++.|.++++ +++||+|++ |+++|+|| .+|+
T Consensus 4 ~~~v~d--iM~~~~~~~~v~~~~~~~~a~~~m~~~~~--~~~pVvd~~~~~~~Givt-------------------~~dl 60 (129)
T 3jtf_A 4 ERTVAD--IMVPRSRMDLLDISQPLPQLLATIIETAH--SRFPVYEDDRDNIIGILL-------------------AKDL 60 (129)
T ss_dssp CCBHHH--HCEEGGGCCCEETTSCHHHHHHHHHHSCC--SEEEEESSSTTCEEEEEE-------------------GGGG
T ss_pred CCCHHH--hCccHHHeEEECCCCCHHHHHHHHHHcCC--CEEEEEcCCCCcEEEEEE-------------------HHHH
Confidence 345655 688 679999999999999999999999 999999986 89999955 5555
Q ss_pred hhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCc
Q 016003 263 MAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAE 342 (397)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
+...... ... ...+|. +
T Consensus 61 ~~~~~~~------------------------------------------------------~~~--------v~~~m~-~ 77 (129)
T 3jtf_A 61 LRYMLEP------------------------------------------------------ALD--------IRSLVR-P 77 (129)
T ss_dssp GGGGTCT------------------------------------------------------TSC--------GGGGCB-C
T ss_pred HhHhccC------------------------------------------------------CcC--------HHHHhC-C
Confidence 4421000 000 012343 5
Q ss_pred cEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHh
Q 016003 343 AIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLE 394 (397)
Q Consensus 343 ~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~ 394 (397)
++++.+++++.+++.+|.+++++++||+|++|+++|+||+.||++++..+++
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei~ 129 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDIE 129 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC-
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCC
Confidence 8899999999999999999999999999998999999999999999987653
No 16
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.75 E-value=4.4e-18 Score=150.92 Aligned_cols=124 Identities=19% Similarity=0.282 Sum_probs=101.4
Q ss_pred ccCCccccCCCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC-CcEEEeeccCcccCcchhHHHHHhhcChhh
Q 016003 185 PALSIDSLGIIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD-GFLIGEISPSTLGCCDETVAAAITTLSAGD 261 (397)
Q Consensus 185 ~~~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~-g~lvG~is~~dl~~~~~~~~~~~~~ls~~D 261 (397)
...++++ +|+ ++++++++++++.+|++.|.++++ +++||+|++ |+++|+ ++.+|
T Consensus 40 ~~~~v~d--iM~~~~~~~~v~~~~~v~~a~~~m~~~~~--~~~pVvd~~~~~lvGi-------------------vt~~d 96 (172)
T 3lhh_A 40 DERTISS--LMVPRSDIVFLDLNLPLDANLRTVMQSPH--SRFPVCRNNVDDMVGI-------------------ISAKQ 96 (172)
T ss_dssp ---CTTT--TSEEGGGCCCEETTSCHHHHHHHHHTCCC--SEEEEESSSTTSEEEE-------------------EEHHH
T ss_pred CCCCHHH--hCccHHHeEEEcCCCCHHHHHHHHHhCCC--CEEEEEeCCCCeEEEE-------------------EEHHH
Confidence 3456665 798 789999999999999999999999 999999988 899999 55677
Q ss_pred hhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC
Q 016003 262 LMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA 341 (397)
Q Consensus 262 l~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
++...... .. .+...+| .
T Consensus 97 l~~~~~~~-----------------------------------------------------~~--------~~v~~im-~ 114 (172)
T 3lhh_A 97 LLSESIAG-----------------------------------------------------ER--------LELVDLV-K 114 (172)
T ss_dssp HHHHHHTT-----------------------------------------------------CC--------CCGGGGC-B
T ss_pred HHHHHhhc-----------------------------------------------------Cc--------ccHHHHh-c
Confidence 76522100 00 0012357 8
Q ss_pred ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 342 EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 342 ~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++++|++++++.+++.+|.+++++++||+|++|+++||||+.||++++..++
T Consensus 115 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~ 166 (172)
T 3lhh_A 115 NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEF 166 (172)
T ss_dssp CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTC
T ss_pred CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999998754
No 17
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.75 E-value=6.5e-18 Score=142.45 Aligned_cols=122 Identities=19% Similarity=0.251 Sum_probs=98.4
Q ss_pred cCCccccCCCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC-CcEEEeeccCcccCcchhHHHHHhhcChhhh
Q 016003 186 ALSIDSLGIIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD-GFLIGEISPSTLGCCDETVAAAITTLSAGDL 262 (397)
Q Consensus 186 ~~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~-g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl 262 (397)
..++++ +|+ .+++++.+++++.+|++.|.++++ +++||+|++ |+++|+ ++.+|+
T Consensus 5 ~~~v~~--iM~~~~~v~~v~~~~~~~~a~~~m~~~~~--~~~pVvd~~~~~~~Gi-------------------vt~~dl 61 (130)
T 3i8n_A 5 DVPVTQ--VMTPRPVVFRVDATMTINEFLDKHKDTPF--SRPLVYSEQKDNIIGF-------------------VHRLEL 61 (130)
T ss_dssp --CCTT--TSCCBCCCCEEETTSBHHHHHHHTTTCSC--SCCEEESSSTTCEEEE-------------------CCHHHH
T ss_pred cCCHhh--CCCcHHHEEEEcCCCCHHHHHHHHHhCCC--CEEEEEeCCCCcEEEE-------------------EEHHHH
Confidence 455665 788 468899999999999999999999 999999987 899999 667777
Q ss_pred hhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCc
Q 016003 263 MAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAE 342 (397)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
+...... . . . .....+| .+
T Consensus 62 ~~~~~~~--------------------------------~--------------~------~--------~~v~~~m-~~ 80 (130)
T 3i8n_A 62 FKMQQSG--------------------------------S--------------G------Q--------KQLGAVM-RP 80 (130)
T ss_dssp HHHHHTT--------------------------------T--------------T------T--------SBHHHHS-EE
T ss_pred HHHHhcC--------------------------------C--------------C------c--------CCHHHHh-cC
Confidence 7632100 0 0 0 0012345 46
Q ss_pred cEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 343 AIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 343 ~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+++|++++++.+++++|.+++++++||+|++|+++|+||+.||++++..
T Consensus 81 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 81 IQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp CCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 8999999999999999999999999999999999999999999999864
No 18
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.75 E-value=8e-18 Score=141.32 Aligned_cols=121 Identities=19% Similarity=0.333 Sum_probs=95.1
Q ss_pred CCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC-CcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 187 LSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD-GFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 187 ~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~-g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
.++++ +|++ +++++.+++++.+|++.|.++++ +++||+|++ |+++|+|| .+|++
T Consensus 3 ~~v~d--iM~~~~~~~~v~~~~~~~~a~~~m~~~~~--~~~pVvd~~~~~~vGivt-------------------~~dl~ 59 (127)
T 3nqr_A 3 QRVRD--IMIPRSQMITLKRNQTLDECLDVIIESAH--SRFPVISEDKDHIEGILM-------------------AKDLL 59 (127)
T ss_dssp CBHHH--HSEEGGGCCCEETTCCHHHHHHHHHHHCC--SEEEEESSSTTCEEEEEE-------------------GGGGG
T ss_pred cCHHH--hcccHHHeEEEcCCCCHHHHHHHHHhCCC--CEEEEEcCCCCcEEEEEE-------------------HHHHH
Confidence 34555 6884 49999999999999999999999 999999988 89999955 55554
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCcc
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEA 343 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
..+... . . ..+...+|. ++
T Consensus 60 ~~~~~~--------------------------------~--------------------~--------~~~v~~~m~-~~ 78 (127)
T 3nqr_A 60 PFMRSD--------------------------------A--------------------E--------AFSMDKVLR-TA 78 (127)
T ss_dssp GGGSTT--------------------------------C--------------------C--------CCCHHHHCB-CC
T ss_pred HHHhcc--------------------------------C--------------------C--------CCCHHHHcC-CC
Confidence 422100 0 0 000123453 47
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+++++++++.+++.+|.+++++++||+|++|+++|+||+.||++++..
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 899999999999999999999999999999999999999999998864
No 19
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.74 E-value=2.6e-18 Score=150.63 Aligned_cols=123 Identities=19% Similarity=0.286 Sum_probs=96.3
Q ss_pred CCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCC
Q 016003 194 IIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGP 271 (397)
Q Consensus 194 ~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~ 271 (397)
+|+ .+++++.+++++.+|+++|.++++ +++||+|++|+++|+ +|.+|++.++..
T Consensus 20 iM~P~~~v~~v~~~~t~~~a~~~m~~~~~--s~~pVvd~~~~lvGi-------------------it~~Di~~~~~~--- 75 (156)
T 3k6e_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTY--TRVPVVTDEKQFVGT-------------------IGLRDIMAYQME--- 75 (156)
T ss_dssp GEEETTSSCCEETTSBHHHHHHHHTTSSS--SEEEEECC-CBEEEE-------------------EEHHHHHHHHHH---
T ss_pred hCcchhHeEEECCcCCHHHHHHHHHHcCC--cEEEEEcCCCcEEEE-------------------EEecchhhhhhh---
Confidence 676 579999999999999999999999 999999999999999 556776653210
Q ss_pred CchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCc
Q 016003 272 PEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSS 351 (397)
Q Consensus 272 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~s 351 (397)
..... +.. . ..+...+|.+++++|+++++
T Consensus 76 --------------~~~~~--------------------------~~~---~--------~~~v~~im~~~~~~v~~~~~ 104 (156)
T 3k6e_A 76 --------------HDLSQ--------------------------EIM---A--------DTDIVHMTKTDVAVVSPDFT 104 (156)
T ss_dssp --------------HTCCH--------------------------HHH---T--------TSBGGGTCBCSCCCBCTTCC
T ss_pred --------------ccccc--------------------------ccc---c--------ccCHHHhhcCCceecccccH
Confidence 00000 000 0 01123468899999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 352 LMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 352 l~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
+.+++++|.++++ +||||++|+++||||++||++++.+.+
T Consensus 105 l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 105 ITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp HHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHHHHh
Confidence 9999999998764 999999999999999999999997654
No 20
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.74 E-value=7.4e-18 Score=142.52 Aligned_cols=120 Identities=12% Similarity=0.147 Sum_probs=96.0
Q ss_pred CCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcC-CCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCC
Q 016003 194 IIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDS-DGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGG 270 (397)
Q Consensus 194 ~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~-~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~ 270 (397)
+|+ ++++++.+++++.+|+++|.++++ +++||+++ +|+++|+ ++.+|++.....+.
T Consensus 7 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~--~~~pVv~~~~~~lvGi-------------------vt~~dl~~~~~~~~ 65 (130)
T 3hf7_A 7 IMVPRNEIVGIDINDDWKSIVRQLTHSPH--GRIVLYRDSLDDAISM-------------------LRVREAYRLMTEKK 65 (130)
T ss_dssp HSEEGGGCCEEETTSCHHHHHHHHHTCSS--SEEEEESSSGGGEEEE-------------------EEHHHHHHHHTSSS
T ss_pred hCccHHHEEEEcCCCCHHHHHHHHHHCCC--CeEEEEcCCCCcEEEE-------------------EEHHHHHHHHhccC
Confidence 686 479999999999999999999999 99999976 5899999 55777765321100
Q ss_pred CCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCC
Q 016003 271 PPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTS 350 (397)
Q Consensus 271 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~ 350 (397)
. + . ......+| .+++++++++
T Consensus 66 ~------------------------------~--------------~--------------~~~v~~~m-~~~~~v~~~~ 86 (130)
T 3hf7_A 66 E------------------------------F--------------T--------------KEIMLRAA-DEIYFVPEGT 86 (130)
T ss_dssp C------------------------------C--------------C--------------HHHHHHHS-BCCCEEETTC
T ss_pred c------------------------------c--------------c--------------hhhHHHhc-cCCeEeCCCC
Confidence 0 0 0 00112345 6789999999
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 351 SLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 351 sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++.+++++|.+++++++||+|++|+++||||+.||++++..++
T Consensus 87 ~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~i 129 (130)
T 3hf7_A 87 PLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGDF 129 (130)
T ss_dssp BHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC--
T ss_pred cHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999998765
No 21
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.74 E-value=1e-17 Score=138.84 Aligned_cols=115 Identities=19% Similarity=0.262 Sum_probs=97.7
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCc
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPE 273 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~ 273 (397)
+|+++++++.+++++.+|++.|.++++ +.+||+|++|+++|+ ++.+|++..+...
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~~~~~~G~-------------------vt~~dl~~~~~~~---- 60 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNI--NHLPIVDEHGKLVGI-------------------ITSWDIAKALAQN---- 60 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTC--SCEEEECTTSBEEEE-------------------ECHHHHHHHHHTT----
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCC--CeEEEECCCCCEEEE-------------------EEHHHHHHHHHhc----
Confidence 688999999999999999999999999 999999999999999 5677776532100
Q ss_pred hhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCcHH
Q 016003 274 DLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLM 353 (397)
Q Consensus 274 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~ 353 (397)
. . +...+|..++++|++++++.
T Consensus 61 ----------------------------~----------------------~--------~v~~~~~~~~~~v~~~~~l~ 82 (122)
T 3kpb_A 61 ----------------------------K----------------------K--------TIEEIMTRNVITAHEDEPVD 82 (122)
T ss_dssp ----------------------------C----------------------C--------BGGGTSBSSCCCEETTSBHH
T ss_pred ----------------------------c----------------------c--------CHHHHhcCCCeEECCCCCHH
Confidence 0 0 01124677899999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 354 AVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 354 ~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+++++|.+++++++||+|++|+++|+||..||++++.+
T Consensus 83 ~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 83 HVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp HHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred HHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 99999999999999999999999999999999999865
No 22
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.74 E-value=2.7e-17 Score=138.53 Aligned_cols=128 Identities=20% Similarity=0.261 Sum_probs=102.3
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAY 265 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~ 265 (397)
..++++ +|+++++++.+++++.+|++.|.++++ +++||+| +|+++|+ ++.+|++.+
T Consensus 3 ~~~v~~--im~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd-~~~~~Gi-------------------vt~~dl~~~ 58 (133)
T 2ef7_A 3 EEIVKE--YMKTQVISVTKDAKLNDIAKVMTEKNI--GSVIVVD-GNKPVGI-------------------ITERDIVKA 58 (133)
T ss_dssp CCBGGG--TSBCSCCEEETTCBHHHHHHHHHHHTC--SEEEEEE-TTEEEEE-------------------EEHHHHHHH
T ss_pred cccHHH--hccCCCEEECCCCcHHHHHHHHHhcCC--CEEEEEE-CCEEEEE-------------------EcHHHHHHH
Confidence 345655 798999999999999999999999999 9999999 8999999 556776653
Q ss_pred hccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEE
Q 016003 266 IDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIV 345 (397)
Q Consensus 266 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it 345 (397)
+... +. .. .+...+|..++++
T Consensus 59 ~~~~--------------------------------~~-------------------~~--------~~v~~~~~~~~~~ 79 (133)
T 2ef7_A 59 IGKG--------------------------------KS-------------------LE--------TKAEEFMTASLIT 79 (133)
T ss_dssp HHTT--------------------------------CC-------------------TT--------CBGGGTSEECCCC
T ss_pred HhcC--------------------------------CC-------------------cc--------cCHHHHcCCCCEE
Confidence 2100 00 00 0012346678999
Q ss_pred eCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHhhh
Q 016003 346 CHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLETM 396 (397)
Q Consensus 346 ~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~~~ 396 (397)
|++++++.+++.+|.+++++++||+|++|+++|+||+.||++++.++++.+
T Consensus 80 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~~l 130 (133)
T 2ef7_A 80 IREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFETM 130 (133)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC---
T ss_pred ECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998899999999999999998876643
No 23
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.74 E-value=9.5e-18 Score=142.83 Aligned_cols=124 Identities=19% Similarity=0.271 Sum_probs=95.8
Q ss_pred CCccccCCCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC-CcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 187 LSIDSLGIIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD-GFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 187 ~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~-g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
.++++ +|+ ++++++.+++++.+|+++|.++++ +++||+|++ |+++|+|| .+|++
T Consensus 3 ~~v~~--iM~~~~~~~~v~~~~~v~~a~~~m~~~~~--~~~pVvd~~~~~~vGivt-------------------~~dl~ 59 (136)
T 3lfr_A 3 LQVRD--IMVPRSQMISIKATQTPREFLPAVIDAAH--SRYPVIGESHDDVLGVLL-------------------AKDLL 59 (136)
T ss_dssp CBHHH--HSEEGGGCCCEETTCCHHHHHHHHHHHCC--SEEEEESSSTTCEEEEEE-------------------GGGGG
T ss_pred CChHh--ccccHHHEEEEcCCCCHHHHHHHHHhCCC--CEEEEEcCCCCcEEEEEE-------------------HHHHH
Confidence 34555 688 679999999999999999999999 999999988 89999965 55554
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCcc
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEA 343 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
..+... . . . ... ...+|. ++
T Consensus 60 ~~~~~~-----------------~-~------~---------------------------~~~--------v~~~m~-~~ 79 (136)
T 3lfr_A 60 PLILKA-----------------D-G------D---------------------------SDD--------VKKLLR-PA 79 (136)
T ss_dssp GGGGSS-----------------S-G------G---------------------------GCC--------GGGTCB-CC
T ss_pred HHHHhc-----------------c-C------C---------------------------CcC--------HHHHcC-CC
Confidence 422100 0 0 0 000 112354 48
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
+++.+++++.+++.+|.+++++++||+|++|+++||||+.||++++..++
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~ 129 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDI 129 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC----
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999988754
No 24
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.73 E-value=1.1e-17 Score=143.41 Aligned_cols=140 Identities=15% Similarity=0.186 Sum_probs=101.3
Q ss_pred CCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhh
Q 016003 187 LSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMA 264 (397)
Q Consensus 187 ~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~ 264 (397)
.++++ +|++ +++++.+++++.+|++.|.++++ +++||+|++|+++|+||..||.+
T Consensus 5 ~~v~~--im~~~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~~~~~~G~vt~~dl~~------------------- 61 (152)
T 4gqw_A 5 YTVGE--FMTKKEDLHVVKPTTTVDEALELLVENRI--TGFPVIDEDWKLVGLVSDYDLLA------------------- 61 (152)
T ss_dssp SBGGG--TSEESTTCCCBCTTSBHHHHHHHHHHTTC--SEEEEECTTCBEEEEEEHHHHTT-------------------
T ss_pred EEhhh--ccCCCCCCeEECCCCcHHHHHHHHHHcCC--ceEEEEeCCCeEEEEEEHHHHHH-------------------
Confidence 45555 7887 89999999999999999999999 99999999999999966544444
Q ss_pred hhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccE
Q 016003 265 YIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAI 344 (397)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 344 (397)
+.........+ ..+...+. .....+...+|..+++
T Consensus 62 ~~~~~~~~~~~-------------~~~~~~~~--------------------------------~~~~~~v~~~m~~~~~ 96 (152)
T 4gqw_A 62 LDSGDSTWKTF-------------NAVQKLLS--------------------------------KTNGKLVGDLMTPAPL 96 (152)
T ss_dssp CC----CCHHH-------------HHHHTC-------------------------------------CCBHHHHSEESCC
T ss_pred hhcccCcccch-------------HHHHHHHH--------------------------------HhccccHHHhcCCCce
Confidence 21100000000 00000000 0001112346778899
Q ss_pred EeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHh
Q 016003 345 VCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLE 394 (397)
Q Consensus 345 t~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~ 394 (397)
+|++++++.+++.+|.+++++++||+|++|+++|+||.+||++++.+..+
T Consensus 97 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~~ 146 (152)
T 4gqw_A 97 VVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 146 (152)
T ss_dssp CEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC---
T ss_pred EECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhccc
Confidence 99999999999999999999999999988999999999999999987543
No 25
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.73 E-value=2e-17 Score=140.74 Aligned_cols=130 Identities=23% Similarity=0.351 Sum_probs=100.6
Q ss_pred ccCCccccC-CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 185 PALSIDSLG-IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 185 ~~~ti~~L~-~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
..++++++. +|.++++++.+++++.+|++.|.++++ +++||+|++|+++|+| +.+|++
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~~~~~~Giv-------------------t~~dl~ 64 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRV--SSVPIIDENGYLINVY-------------------EAYDVL 64 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTC--SEEEEECTTCBEEEEE-------------------EHHHHH
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCc--ceeeEEcCCCcEEEEE-------------------cHHHHH
Confidence 466777766 577899999999999999999999999 9999999999999995 566665
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC--
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA-- 341 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 341 (397)
.++..+ .. . . .. .+...+|..
T Consensus 65 ~~~~~~-----------------~~-------~-----~--------------------~~--------~~v~~~m~~~~ 87 (144)
T 2nyc_A 65 GLIKGG-----------------IY-------N-----D--------------------LS--------LSVGEALMRRS 87 (144)
T ss_dssp HHHHTC-----------------------------------------------------CC--------SBHHHHHHHCC
T ss_pred HHhccc-----------------cc-------c-----c--------------------CC--------ccHHHHHhcCc
Confidence 532100 00 0 0 00 001112322
Q ss_pred ----ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHH
Q 016003 342 ----EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKH 392 (397)
Q Consensus 342 ----~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~ 392 (397)
++++|++++++.+++++|.+++++++||+|++|+++|+||..||++++.++
T Consensus 88 ~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 88 DDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp ------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred cccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHhc
Confidence 689999999999999999999999999999889999999999999999764
No 26
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.72 E-value=7.6e-18 Score=148.87 Aligned_cols=132 Identities=16% Similarity=0.151 Sum_probs=108.6
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc-
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD- 82 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~- 82 (397)
.|.+.+|+|+| +++++++++++|+.+|+++|.+++++++||+|.+ |+++|+||..||++.+...
T Consensus 14 ~l~~~~V~diM--~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-------------g~lvGiit~~Dll~~~~~~~ 78 (170)
T 4esy_A 14 AIRQVPIRDIL--TSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-------------GHLVGIITESDFLRGSIPFW 78 (170)
T ss_dssp HHHTSBGGGGC--CSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-------------SCEEEEEEGGGGGGGTCCTT
T ss_pred HHcCCCHHHhc--CCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-------------ccEEEEEEHHHHHHHHhhcc
Confidence 46678999999 5689999999999999999999999999999963 6899999999998765421
Q ss_pred ---------CCCCC------hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhh
Q 016003 83 ---------SNSLS------PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQ 146 (397)
Q Consensus 83 ---------~~l~~------~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~ 146 (397)
..... .....+.+++++|... ++++.++++|.+|+++|. +++++++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~---------- 144 (170)
T 4esy_A 79 IYEASEILSRAIPAPEVEHLFETGRKLTASAVMTQP----VVTAAPEDSVGSIADQMRRHGIHRIPVVQD---------- 144 (170)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCC----SCCBCTTSBHHHHHHHHHHTTCSEEEEEET----------
T ss_pred ccchhhhhhhccchhhHHhhhccccccchhhhcccC----cccCCcchhHHHHHHHHHHcCCcEEEEEEC----------
Confidence 00000 0122357899999765 899999999999999999 89999999852
Q ss_pred cccccccccCCCCceeeeecHHHHHHHHHh
Q 016003 147 QKLSSSSLTNHNGREFCWLTQEDIIRFILS 176 (397)
Q Consensus 147 ~~~~~~~~~~~~~~~~~IITq~DIi~~l~~ 176 (397)
|+++||||++||++++..
T Consensus 145 ------------g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 145 ------------GVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp ------------TEEEEEEEHHHHTTTSCC
T ss_pred ------------CEEEEEEEHHHHHHHHHh
Confidence 357899999999999754
No 27
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=2.2e-17 Score=138.66 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=100.9
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAY 265 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~ 265 (397)
..++++ +|++++.++.+++++.+|++.|.++++ +.+||+|+ |+++|+| +.+|++..
T Consensus 4 s~~v~~--~m~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~-~~~~Giv-------------------t~~dl~~~ 59 (128)
T 3gby_A 4 SVTFSY--LAETDYPVFTLGGSTADAARRLAASGC--ACAPVLDG-ERYLGMV-------------------HLSRLLEG 59 (128)
T ss_dssp TCBGGG--GCBCCSCCEETTSBHHHHHHHHHHHTC--SEEEEEET-TEEEEEE-------------------EHHHHHTT
T ss_pred ceEHHH--hhcCCcceECCCCCHHHHHHHHHHCCC--cEEEEEEC-CEEEEEE-------------------EHHHHHHH
Confidence 345555 799999999999999999999999999 99999999 9999994 56666652
Q ss_pred hccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEE
Q 016003 266 IDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIV 345 (397)
Q Consensus 266 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it 345 (397)
...+ .. . ... ..++|..++++
T Consensus 60 ~~~~--------------------------------~~-------------~------~~~--------v~~~m~~~~~~ 80 (128)
T 3gby_A 60 RKGW--------------------------------PT-------------V------KEK--------LGEELLETVRS 80 (128)
T ss_dssp CSSS--------------------------------CC-------------T------TCB--------CCGGGCBCCCC
T ss_pred HhhC--------------------------------Cc-------------c------cCc--------HHHHccCCCcE
Confidence 2100 00 0 000 11357789999
Q ss_pred eCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHH
Q 016003 346 CHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKH 392 (397)
Q Consensus 346 ~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~ 392 (397)
+++++++.+++++|.+++++++||+|++|+++|+||+.||++++.+.
T Consensus 81 v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 81 YRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp BCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHhh
Confidence 99999999999999999999999999989999999999999998753
No 28
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.72 E-value=5e-17 Score=137.77 Aligned_cols=127 Identities=24% Similarity=0.358 Sum_probs=102.7
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhh-
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMA- 264 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~- 264 (397)
..++++ +|+++++++.+++++.+|++.|.++++ +++||+|++|+++|+ ++.+|++.
T Consensus 6 ~~~v~~--im~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~~~~~~Gi-------------------vt~~dl~~~ 62 (138)
T 2yzi_A 6 KAPIKV--YMTKKLLGVKPSTSVQEASRLMMEFDV--GSLVVINDDGNVVGF-------------------FTKSDIIRR 62 (138)
T ss_dssp TSBGGG--TCBCCCCEECTTSBHHHHHHHHHHHTC--SEEEEECTTSCEEEE-------------------EEHHHHHHH
T ss_pred hhhHHH--HhcCCCeEECCCCcHHHHHHHHHHcCC--CEEEEEcCCCcEEEE-------------------EeHHHHHHH
Confidence 455665 799999999999999999999999999 999999988999999 45666642
Q ss_pred hhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccE
Q 016003 265 YIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAI 344 (397)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 344 (397)
++..+ . . . ..+...+|..+++
T Consensus 63 ~~~~~------------------~-------------~--------------------~--------~~~v~~~m~~~~~ 83 (138)
T 2yzi_A 63 VIVPG------------------L-------------P--------------------Y--------DIPVERIMTRNLI 83 (138)
T ss_dssp TTTTC------------------C-------------C--------------------T--------TSBGGGTCBCSCC
T ss_pred HHhcC------------------C-------------c--------------------c--------cCCHHHHhhCCCe
Confidence 21100 0 0 0 0001235778999
Q ss_pred EeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHhh
Q 016003 345 VCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLET 395 (397)
Q Consensus 345 t~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~~ 395 (397)
+|++++++.+++.+|.+++++++ |+|++|+++|+||..||++++.+.++.
T Consensus 84 ~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~~ 133 (138)
T 2yzi_A 84 TANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLET 133 (138)
T ss_dssp EEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSCC
T ss_pred EECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHHh
Confidence 99999999999999999999999 999889999999999999999876543
No 29
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.71 E-value=5.9e-17 Score=137.19 Aligned_cols=125 Identities=17% Similarity=0.307 Sum_probs=101.6
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhh-hh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDL-MA 264 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl-~~ 264 (397)
..++++ +|+++++++.+++++.+|++.|.++++ +++||+|++|+++|+ ++.+|+ +.
T Consensus 7 ~~~v~~--im~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~~~~~~Gi-------------------vt~~dl~~~ 63 (138)
T 2p9m_A 7 NIKVKD--VMTKNVITAKRHEGVVEAFEKMLKYKI--SSLPVIDDENKVIGI-------------------VTTTDIGYN 63 (138)
T ss_dssp TCBGGG--TSBCSCCCEETTSBHHHHHHHHHHHTC--CEEEEECTTCBEEEE-------------------EEHHHHHHH
T ss_pred cCCHHH--hhcCCceEECCCCcHHHHHHHHHHCCC--cEEEEECCCCeEEEE-------------------EEHHHHHHH
Confidence 456665 798999999999999999999999999 999999988999999 556676 54
Q ss_pred hhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccE
Q 016003 265 YIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAI 344 (397)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 344 (397)
++... .+ . ..+...+|..+++
T Consensus 64 ~~~~~-------------------------------~~--------------------~--------~~~v~~~m~~~~~ 84 (138)
T 2p9m_A 64 LIRDK-------------------------------YT--------------------L--------ETTIGDVMTKDVI 84 (138)
T ss_dssp HTTTC-------------------------------CC--------------------S--------SCBHHHHSCSSCC
T ss_pred HHhhc-------------------------------cc--------------------C--------CcCHHHHhCCCcE
Confidence 22100 00 0 0012245778999
Q ss_pred EeCCCCcHHHHHHHHHHcC-----CcEEEEEcCCCcEEEEEehHHHHHHHHHH
Q 016003 345 VCHPTSSLMAVMIQAIAHR-----VTYVWVIEDDCTLTGIVTFSDLLKVFRKH 392 (397)
Q Consensus 345 t~~~~~sl~~v~~~m~~~~-----i~rl~VVd~~~~lvGvVt~~DIl~~l~~~ 392 (397)
+|++++++.+++.+|.+++ ++++||+|++|+++|+||..||++++.++
T Consensus 85 ~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 137 (138)
T 2p9m_A 85 TIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISKI 137 (138)
T ss_dssp CEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHhh
Confidence 9999999999999999999 99999999889999999999999998764
No 30
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.71 E-value=4.7e-17 Score=140.11 Aligned_cols=132 Identities=19% Similarity=0.238 Sum_probs=101.6
Q ss_pred cCCccccCCCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 186 ALSIDSLGIIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 186 ~~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
..++++ +|+ ++++++.+++++.+|++.|.++++ +++||+|++|+++|+| |.+|++
T Consensus 14 ~~~v~~--im~~~~~~~~v~~~~~l~~a~~~~~~~~~--~~~pVvd~~~~~~Giv-------------------t~~dl~ 70 (150)
T 3lqn_A 14 QIFVKD--LMISSEKVAHVQIGNGLEHALLVLVKSGY--SAIPVLDPMYKLHGLI-------------------STAMIL 70 (150)
T ss_dssp HCBHHH--HSEEGGGSCCBCTTSBHHHHHHHHHHHTC--SEEEEECTTCBEEEEE-------------------EHHHHH
T ss_pred cCChhh--cccCCCceEEECCCCcHHHHHHHHHHcCC--cEEEEECCCCCEEEEE-------------------EHHHHH
Confidence 445655 688 569999999999999999999999 9999999999999994 566666
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCcc
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEA 343 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
..+.... +.. . +.+ . ..+...+|..++
T Consensus 71 ~~~~~~~----------------~~~-~-------------------------~~~---~--------~~~v~~~m~~~~ 97 (150)
T 3lqn_A 71 DGILGLE----------------RIE-F-------------------------ERL---E--------EMKVEQVMKQDI 97 (150)
T ss_dssp HHTBCSS----------------SBC-G-------------------------GGG---G--------GCBGGGTCBSSC
T ss_pred HHHHhhc----------------ccc-h-------------------------hHH---h--------cCCHHHHhcCCC
Confidence 5321000 000 0 000 0 011224578899
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHhh
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLET 395 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~~ 395 (397)
++|++++++.+++.+|.++++ +||||++|+++|+||..||++++.++++.
T Consensus 98 ~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~~ 147 (150)
T 3lqn_A 98 PVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVRQ 147 (150)
T ss_dssp CEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred ceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhHh
Confidence 999999999999999999997 99999889999999999999999987654
No 31
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.71 E-value=6.8e-17 Score=139.84 Aligned_cols=134 Identities=18% Similarity=0.282 Sum_probs=97.8
Q ss_pred cCCccccCCCC-cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhh
Q 016003 186 ALSIDSLGIIS-TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMA 264 (397)
Q Consensus 186 ~~ti~~L~~~~-~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~ 264 (397)
.+++.++.+.. ++++++.+++++.+|++.|.++++ +++||+|++|+++|+| |.+|++.
T Consensus 17 ~~~l~~~~v~~~~~~~~v~~~~~~~~a~~~m~~~~~--~~~pVvd~~~~~vGiv-------------------t~~dl~~ 75 (152)
T 2uv4_A 17 SKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRV--SALPVVDEKGRVVDIY-------------------SKFDVIN 75 (152)
T ss_dssp TSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCC--SEEEEECTTSBEEEEE-------------------EHHHHHH
T ss_pred HhhHHHccCCccCCceEeCCCCcHHHHHHHHHHcCC--ceEeEECCCCcEEEEE-------------------eHHHHHH
Confidence 34444444433 789999999999999999999999 9999999999999994 5666655
Q ss_pred hhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccE
Q 016003 265 YIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAI 344 (397)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 344 (397)
..... ..... ...+... +.....|..+++
T Consensus 76 ~~~~~-----------------~~~~~--------------------------------~~~v~~~--m~~~~~~~~~~~ 104 (152)
T 2uv4_A 76 LAAEK-----------------TYNNL--------------------------------DVSVTKA--LQHRSHYFEGVL 104 (152)
T ss_dssp HHHCS-----------------SCCCT--------------------------------TSBGGGG--GGTCCHHHHTCS
T ss_pred Hhcch-----------------hhhhh--------------------------------cchHHHH--HhhhhcccCCCe
Confidence 32110 00000 0000000 000001237899
Q ss_pred EeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 345 VCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 345 t~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+|++++++.+++.+|.+++++++||+|++|+++|+||..||++++.+
T Consensus 105 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 105 KCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp EECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC-
T ss_pred EECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999998999999999999998854
No 32
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=3.2e-17 Score=144.01 Aligned_cols=134 Identities=22% Similarity=0.285 Sum_probs=105.4
Q ss_pred CCCCCCccCCccccCCCCc---CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHh
Q 016003 179 SLFSPIPALSIDSLGIIST---DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAIT 255 (397)
Q Consensus 179 ~~l~~l~~~ti~~L~~~~~---~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~ 255 (397)
..+..+...++++ +|++ +++++.+++++.+|++.|.++++ +++||+|++|+++|+|
T Consensus 16 ~~~~~l~~~~v~d--im~~~~~~~~~v~~~~~l~~a~~~~~~~~~--~~~~Vvd~~~~~~Giv----------------- 74 (165)
T 3fhm_A 16 NLYFQGMATFVKD--LLDRKGRDVVTVGPDVSIGEAAGTLHAHKI--GAVVVTDADGVVLGIF----------------- 74 (165)
T ss_dssp CCCCSSSSCBHHH--HHHHHCSCCCEECTTSBHHHHHHHHHHHTC--SEEEEECTTSCEEEEE-----------------
T ss_pred hhhHhhhhcCHHH--HhccCCCCCeEECCCCCHHHHHHHHHHcCC--CEEEEEcCCCeEEEEE-----------------
Confidence 3455566677776 6874 79999999999999999999999 9999999999999994
Q ss_pred hcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchh
Q 016003 256 TLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSA 335 (397)
Q Consensus 256 ~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (397)
+.+|++..+.. . ... . .. .+.
T Consensus 75 --t~~dl~~~~~~-------------~----~~~------~--------------------------~~--------~~v 95 (165)
T 3fhm_A 75 --TERDLVKAVAG-------------Q----GAA------S--------------------------LQ--------QSV 95 (165)
T ss_dssp --EHHHHHHHHHH-------------H----GGG------G--------------------------GT--------SBG
T ss_pred --EHHHHHHHHHh-------------c----CCc------c--------------------------cc--------CCH
Confidence 56666652210 0 000 0 00 001
Q ss_pred hhhcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 336 RMVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 336 ~~~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
..+|..++++|++++++.+++.+|.+++++++||+|+ |+++|+||..||++++.++.
T Consensus 96 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 96 SVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEI 152 (165)
T ss_dssp GGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC-
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHH
Confidence 2357789999999999999999999999999999999 99999999999999986643
No 33
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.71 E-value=1.1e-16 Score=136.48 Aligned_cols=122 Identities=12% Similarity=0.141 Sum_probs=99.5
Q ss_pred CCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCC--cEEEeeccCcccCcchhHHHHHhhcChhhhhh
Q 016003 187 LSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDG--FLIGEISPSTLGCCDETVAAAITTLSAGDLMA 264 (397)
Q Consensus 187 ~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g--~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~ 264 (397)
.++++ +|+++++++.+++++.+|++.|.++++ +++||+|++| +++|+ ++.+|++.
T Consensus 5 ~~v~~--im~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~~~~~~~~Gi-------------------vt~~dl~~ 61 (141)
T 2rih_A 5 IRTSE--LLKRPPVSLPETATIREVATELAKNRV--GLAVLTARDNPKRPVAV-------------------VSERDILR 61 (141)
T ss_dssp CBGGG--GCCSCCEEEETTCBHHHHHHHHHHHTC--SEEEEEETTEEEEEEEE-------------------EEHHHHHH
T ss_pred eEHHH--HhcCCCeEeCCCCcHHHHHHHHHHcCC--CEEEEEcCCCcceeEEE-------------------EEHHHHHH
Confidence 45555 789999999999999999999999999 9999999988 99999 45667665
Q ss_pred hhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccE
Q 016003 265 YIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAI 344 (397)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 344 (397)
++..+ . . .. .+...+|..+++
T Consensus 62 ~~~~~------------------~-------~--------------------------~~--------~~v~~~m~~~~~ 82 (141)
T 2rih_A 62 AVAQR------------------L-------D--------------------------LD--------GPAMPIANSPIT 82 (141)
T ss_dssp HHHTT------------------C-------C--------------------------TT--------SBSGGGCBCCCE
T ss_pred HHhcC------------------C-------C--------------------------CC--------CCHHHHcCCCCe
Confidence 32100 0 0 00 001235778999
Q ss_pred EeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 345 VCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 345 t~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+|+++ ++.+++++|.+++++++||+|++|+++|+||..||++++..
T Consensus 83 ~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 83 VLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp EETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred EEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 99999 99999999999999999999988999999999999987755
No 34
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=1.3e-16 Score=139.29 Aligned_cols=128 Identities=21% Similarity=0.246 Sum_probs=101.6
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAY 265 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~ 265 (397)
..++++ +|+++ +++.+++++.+|++.|.++++ +.+||+|++|+++|+ ++.+|++..
T Consensus 16 ~~~v~~--im~~~-~~v~~~~~~~~a~~~m~~~~~--~~~~Vvd~~~~~~Gi-------------------vt~~dl~~~ 71 (159)
T 3fv6_A 16 KLQVKD--FQSIP-VVIHENVSVYDAICTMFLEDV--GTLFVVDRDAVLVGV-------------------LSRKDLLRA 71 (159)
T ss_dssp TCBGGG--SCBCC-CEEETTSBHHHHHHHHHHHTC--SEEEEECTTSCEEEE-------------------EEHHHHHHH
T ss_pred hCCHHH--HcCCC-EEECCCCcHHHHHHHHHHCCC--CEEEEEcCCCcEEEE-------------------EeHHHHHHH
Confidence 345665 78875 499999999999999999999 999999999999999 556776652
Q ss_pred hccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC--cc
Q 016003 266 IDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA--EA 343 (397)
Q Consensus 266 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 343 (397)
+-.. ..+ . ..+..++|.. ++
T Consensus 72 ~~~~------------------------------~~~--------------------~--------~~~v~~~m~~~~~~ 93 (159)
T 3fv6_A 72 SIGQ------------------------------QEL--------------------T--------SVPVHIIMTRMPNI 93 (159)
T ss_dssp HTSC------------------------------SCT--------------------T--------TCBGGGTSEETTSC
T ss_pred hhcc------------------------------Ccc--------------------c--------CcCHHHHHcCCCCc
Confidence 2100 000 0 0001234666 88
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCCC---cEEEEEehHHHHHHHHHHHhh
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDC---TLTGIVTFSDLLKVFRKHLET 395 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~---~lvGvVt~~DIl~~l~~~~~~ 395 (397)
++|++++++.+++.+|.+++++++||+|++| +++|+||..||++++.+-.+.
T Consensus 94 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~~ 148 (159)
T 3fv6_A 94 TVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSEN 148 (159)
T ss_dssp CCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHTT
T ss_pred EEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999988 999999999999999876543
No 35
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.70 E-value=3.5e-17 Score=144.63 Aligned_cols=149 Identities=15% Similarity=0.207 Sum_probs=102.1
Q ss_pred CCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCC
Q 016003 194 IIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGP 271 (397)
Q Consensus 194 ~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~ 271 (397)
+|++ +++++.+++++.+|+++|.++++ +++||+|++|+++|+||..||.++..... .......+..-.. ..
T Consensus 9 im~~~~~~~~v~~~~~l~~a~~~m~~~~~--~~~pVvd~~~~~~Givt~~dl~~~~~~~~---~~~~~~~~~~~~~--~~ 81 (180)
T 3sl7_A 9 FMTPRQNLHVVKPSTSVDDALELLVEKKV--TGLPVIDDNWTLVGVVSDYDLLALDSISG---RSQNDTNLFPDVD--ST 81 (180)
T ss_dssp HSEEGGGCCCBCTTSBHHHHHHHHHHHTC--SEEEEECTTCBEEEEEEHHHHTCC------------------------C
T ss_pred hcCCCCCceeeCCCCcHHHHHHHHHHcCC--CeEEEECCCCeEEEEEEHHHHHhhhhhcc---ccCCccccccccc--ch
Confidence 6887 89999999999999999999999 99999999999999977666655220000 0000000000000 00
Q ss_pred CchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCc
Q 016003 272 PEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSS 351 (397)
Q Consensus 272 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~s 351 (397)
+. .+..+.... ......+...+|..++++|+++++
T Consensus 82 ~~-------------~~~~~~~~~--------------------------------~~~~~~~v~~~m~~~~~~v~~~~~ 116 (180)
T 3sl7_A 82 WK-------------TFNELQKLI--------------------------------SKTYGKVVGDLMTPSPLVVRDSTN 116 (180)
T ss_dssp CC-------------SHHHHHHHH--------------------------------HTTTTCBHHHHSEESCCCEETTSB
T ss_pred hh-------------hhHHHHHHH--------------------------------hccccccHHHHhCCCceEeCCCCc
Confidence 00 000000000 000011234568888999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHh
Q 016003 352 LMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLE 394 (397)
Q Consensus 352 l~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~ 394 (397)
+.+++.+|.+++++++||+|++|+++|+||+.||++++.+..+
T Consensus 117 l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~ 159 (180)
T 3sl7_A 117 LEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKR 159 (180)
T ss_dssp HHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhh
Confidence 9999999999999999999988999999999999999987654
No 36
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.70 E-value=3.1e-17 Score=142.32 Aligned_cols=123 Identities=20% Similarity=0.221 Sum_probs=99.7
Q ss_pred cCCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEE-cC-CCcEEEeeccCcccCcchhHHHHHhhcChhh
Q 016003 186 ALSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVV-DS-DGFLIGEISPSTLGCCDETVAAAITTLSAGD 261 (397)
Q Consensus 186 ~~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVV-d~-~g~lvG~is~~dl~~~~~~~~~~~~~ls~~D 261 (397)
..++++ +|++ +++++.+++++.+|++.|.++++ +++||+ |+ +|+++|+ ++.+|
T Consensus 19 ~~~v~~--iM~~~~~~~~v~~~~~~~~a~~~m~~~~~--~~~pVv~d~~~~~lvGi-------------------vt~~d 75 (153)
T 3oco_A 19 DKVASD--VMVDRTSMSVVDVDETIADALLLYLEEQY--SRFPVTADNDKDKIIGY-------------------AYNYD 75 (153)
T ss_dssp HCBHHH--HSEEGGGCCCEETTSBHHHHHHHHHHHCC--SEEEEEETTEEEEEEEE-------------------EEHHH
T ss_pred CCEeee--EecchhheEEEcCCCCHHHHHHHHHhCCC--CEEEEEECCCCCcEEEE-------------------EEHHH
Confidence 455665 7886 89999999999999999999999 999999 65 4899999 55677
Q ss_pred hhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC
Q 016003 262 LMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA 341 (397)
Q Consensus 262 l~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
++..+.. . . ... ...+| +
T Consensus 76 l~~~~~~-------------~-------------~---------------------------~~~--------v~~~m-~ 93 (153)
T 3oco_A 76 IVRQARI-------------D-------------D---------------------------KAK--------ISTIM-R 93 (153)
T ss_dssp HHHHHHH-------------H-------------T---------------------------TSB--------GGGTC-B
T ss_pred HHhHHhc-------------C-------------C---------------------------CCc--------HHHHh-C
Confidence 7652210 0 0 000 11346 7
Q ss_pred ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 342 EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 342 ~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++++|.+++++.+++.+|.+++++++||+|++|+++||||+.||++++...+
T Consensus 94 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~ 145 (153)
T 3oco_A 94 DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNL 145 (153)
T ss_dssp CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC--
T ss_pred CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccC
Confidence 8999999999999999999999999999999999999999999999998654
No 37
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.69 E-value=1e-16 Score=140.40 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=110.5
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
|...++.++|....+++++++++|+.+|+++|.+++++++||+|. +++++|+|+..|++.++.....
T Consensus 12 ~l~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~-------------~~~lvGiit~~Di~~~~~~~~~ 78 (156)
T 3k6e_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-------------EKQFVGTIGLRDIMAYQMEHDL 78 (156)
T ss_dssp HHHTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--------------CBEEEEEEHHHHHHHHHHHTC
T ss_pred HhhccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC-------------CCcEEEEEEecchhhhhhhccc
Confidence 345678999988789999999999999999999999999999986 3689999999999999876321
Q ss_pred CCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHhcCCceEEEeccCcchhhhhhhcccccccccCCCCceeee
Q 016003 85 SLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLMLGGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCW 164 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 164 (397)
......+.+|+++|... ++++.+++++.+|++.|.+. +.++|+++ .|+.+||
T Consensus 79 --~~~~~~~~~v~~im~~~----~~~v~~~~~l~~~~~~m~~~-~~lpVVd~---------------------~g~l~Gi 130 (156)
T 3k6e_A 79 --SQEIMADTDIVHMTKTD----VAVVSPDFTITEVLHKLVDE-SFLPVVDA---------------------EGIFQGI 130 (156)
T ss_dssp --CHHHHTTSBGGGTCBCS----CCCBCTTCCHHHHHHHTTTS-SEEEEECT---------------------TSBEEEE
T ss_pred --ccccccccCHHHhhcCC----ceecccccHHHHHHHHHHHc-CCeEEEec---------------------CCEEEEE
Confidence 22345678999999765 89999999999999999842 33677643 2578899
Q ss_pred ecHHHHHHHHHhccCC
Q 016003 165 LTQEDIIRFILSSISL 180 (397)
Q Consensus 165 ITq~DIi~~l~~~~~~ 180 (397)
||+.||++.+....+.
T Consensus 131 iT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 131 ITRKSILKAVNALLHD 146 (156)
T ss_dssp EEHHHHHHHHHHHSCC
T ss_pred EEHHHHHHHHHHHhcc
Confidence 9999999998764433
No 38
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.69 E-value=1.5e-16 Score=139.15 Aligned_cols=133 Identities=18% Similarity=0.217 Sum_probs=102.1
Q ss_pred CCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhh
Q 016003 187 LSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYI 266 (397)
Q Consensus 187 ~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~ 266 (397)
.++++ +|+++++++.+++++.+|+++|.++++ +++||+|++|+++|+| +.+|++.++
T Consensus 5 ~~v~d--im~~~~~~v~~~~tl~~a~~~m~~~~~--~~~pVvd~~~~lvGiv-------------------t~~dl~~~~ 61 (160)
T 2o16_A 5 IKVED--MMTRHPHTLLRTHTLNDAKHLMEALDI--RHVPIVDANKKLLGIV-------------------SQRDLLAAQ 61 (160)
T ss_dssp CBGGG--TSEESCCCBCTTSBHHHHHHHHHHHTC--SEEEEECTTCBEEEEE-------------------EHHHHHHHH
T ss_pred CcHHH--HhcCCCeEECCCCcHHHHHHHHHHcCC--CEEEEEcCCCcEEEEE-------------------eHHHHHHHH
Confidence 34555 799999999999999999999999999 9999999999999995 466665422
Q ss_pred ccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEe
Q 016003 267 DCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVC 346 (397)
Q Consensus 267 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~ 346 (397)
.. .+ ... ... . .. . ...+...+|..++++|
T Consensus 62 ~~-------------~~-----~~~---~~~--~----------------~~-----~------~~~~v~~im~~~~~~v 91 (160)
T 2o16_A 62 ES-------------SL-----QRS---AQG--D----------------SL-----A------FETPLFEVMHTDVTSV 91 (160)
T ss_dssp HH-------------HC-----C-----------------------------------------CCCBHHHHSCSCEEEB
T ss_pred HH-------------hh-----ccc---ccc--c----------------ch-----h------cccCHHHHhcCCCeEE
Confidence 10 00 000 000 0 00 0 0111234678899999
Q ss_pred CCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 347 HPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 347 ~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++++++.+++.+|.+++++++||+|+ |+++||||..||++++.+.+
T Consensus 92 ~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 92 APQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp CTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999998 99999999999999987754
No 39
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.69 E-value=1.3e-16 Score=132.61 Aligned_cols=118 Identities=19% Similarity=0.248 Sum_probs=95.9
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCc
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPE 273 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~ 273 (397)
+|+++++++.+++++.+|++.|.++++ +.+||+| +|+++|+ ++.+|++.++..+
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd-~~~~~G~-------------------it~~dl~~~~~~~---- 59 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAK--GSSVVVK-EGVRVGI-------------------VTTWDVLEAIAEG---- 59 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCC--CEEEEEE-TTEEEEE-------------------EEHHHHHHHHHHT----
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCC--CEEEEEe-CCeeEEE-------------------EeHHHHHHHHhcC----
Confidence 688899999999999999999999999 9999999 8999999 4566666522100
Q ss_pred hhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCcHH
Q 016003 274 DLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLM 353 (397)
Q Consensus 274 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~ 353 (397)
. .+ . ..+...+|..++++|++++++.
T Consensus 60 --------------~------------~~--------------------~--------~~~v~~~m~~~~~~v~~~~~l~ 85 (125)
T 1pbj_A 60 --------------D------------DL--------------------A--------EVKVWEVMERDLVTISPRATIK 85 (125)
T ss_dssp --------------C------------CT--------------------T--------TSBHHHHCBCGGGEECTTSCHH
T ss_pred --------------C------------cc--------------------c--------ccCHHHHcCCCCeEECCCCCHH
Confidence 0 00 0 0012245777999999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHH
Q 016003 354 AVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKH 392 (397)
Q Consensus 354 ~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~ 392 (397)
+++++|.+++++++||+|+ |+++|+||..||++++.++
T Consensus 86 ~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 86 EAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMAK 123 (125)
T ss_dssp HHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC--
T ss_pred HHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 9999999999999999998 9999999999999998653
No 40
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.68 E-value=3.6e-16 Score=143.19 Aligned_cols=122 Identities=15% Similarity=0.144 Sum_probs=102.3
Q ss_pred ccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhc---CCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhh
Q 016003 185 PALSIDSLGIISTDVVAVDYHSPASLALEAISRS---LFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGD 261 (397)
Q Consensus 185 ~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~---~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~D 261 (397)
...++++ +|+++++++.+++++.+|++.|.++ ++ +.+||+|++|+++|+|| .+|
T Consensus 52 ~~~~v~~--iM~~~~~~v~~~~tv~eal~~~~~~~~~~~--~~~~Vvd~~~~lvGivt-------------------~~d 108 (205)
T 3kxr_A 52 SENEIGR--YTDHQMLVLSDKATVAQAQRFFRRIELDCN--DNLFIVDEADKYLGTVR-------------------RYD 108 (205)
T ss_dssp CTTCGGG--GCBCCCCEEETTCBHHHHHHHHHHCCCTTC--CEEEEECTTCBEEEEEE-------------------HHH
T ss_pred CcchHHh--hccCceEEECCCCcHHHHHHHHHhhCccCe--eEEEEEcCCCeEEEEEE-------------------HHH
Confidence 3556766 7999999999999999999999987 77 99999999999999954 555
Q ss_pred hhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC
Q 016003 262 LMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA 341 (397)
Q Consensus 262 l~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
++.... ... ...+|..
T Consensus 109 ll~~~~--------------------------------------------------------~~~--------v~~im~~ 124 (205)
T 3kxr_A 109 IFKHEP--------------------------------------------------------HEP--------LISLLSE 124 (205)
T ss_dssp HTTSCT--------------------------------------------------------TSB--------GGGGCCS
T ss_pred HHhCCC--------------------------------------------------------cch--------HHHHhcC
Confidence 543000 000 1135778
Q ss_pred ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 342 EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 342 ~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++++|++++++.+++.+|.+++++++||||++|+++|+||..||++++.++.
T Consensus 125 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 125 DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998764
No 41
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=5.8e-17 Score=136.50 Aligned_cols=124 Identities=21% Similarity=0.289 Sum_probs=98.7
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhh-h
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLM-A 264 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~-~ 264 (397)
..++++ +|+++++++.+++++.+|++.|.++++ +++||+|++|+++|+| +.+|++ .
T Consensus 7 ~~~v~~--im~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd~~~~~~Giv-------------------t~~dl~~~ 63 (133)
T 1y5h_A 7 MTTARD--IMNAGVTCVGEHETLTAAAQYMREHDI--GALPICGDDDRLHGML-------------------TDRDIVIK 63 (133)
T ss_dssp -CCHHH--HSEETCCCEETTSBHHHHHHHHHHHTC--SEEEEECGGGBEEEEE-------------------EHHHHHHT
T ss_pred hcCHHH--HhcCCceEeCCCCCHHHHHHHHHHhCC--CeEEEECCCCeEEEEE-------------------eHHHHHHH
Confidence 345655 688899999999999999999999999 9999999889999994 566665 2
Q ss_pred hhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccE
Q 016003 265 YIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAI 344 (397)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 344 (397)
++..+ . .+ . ..+...+|..+++
T Consensus 64 ~~~~~------------------~-------------~~-------------------~--------~~~v~~~m~~~~~ 85 (133)
T 1y5h_A 64 GLAAG------------------L-------------DP-------------------N--------TATAGELARDSIY 85 (133)
T ss_dssp TGGGT------------------C-------------CT-------------------T--------TSBHHHHHTTCCC
T ss_pred HHhcC------------------C-------------Cc-------------------c--------ccCHHHHhcCCCE
Confidence 22100 0 00 0 0012245778999
Q ss_pred EeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 345 VCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 345 t~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+|++++++.+++++|.+++++++||+|+ |+++|+||..||++++.+
T Consensus 86 ~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 86 YVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC-
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 9999999999999999999999999998 899999999999998754
No 42
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.68 E-value=1.5e-16 Score=138.58 Aligned_cols=116 Identities=20% Similarity=0.302 Sum_probs=93.3
Q ss_pred cCCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCC-cEEEeeccCcccCcchhHHHHHhhcChhhh
Q 016003 186 ALSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDG-FLIGEISPSTLGCCDETVAAAITTLSAGDL 262 (397)
Q Consensus 186 ~~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g-~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl 262 (397)
..++++ +|++ +++++++++++.+|++.|.++++ +++||+|+++ +++|+|| .+|+
T Consensus 37 ~~~v~d--iM~~~~~~~~v~~~~~i~~a~~~m~~~~~--~~~pVvd~~~~~lvGivt-------------------~~dl 93 (156)
T 3oi8_A 37 DLEVRD--AMITRSRMNVLKENDSIERITAYVIDTAH--SRFPVIGEDKDEVLGILH-------------------AKDL 93 (156)
T ss_dssp TCBGGG--TCEEGGGCCCEETTCCHHHHHHHHHHHCC--SEEEEESSSTTCEEEEEE-------------------GGGG
T ss_pred CCCHhh--eeeeHHHeEEECCCCCHHHHHHHHHHCCC--CEEEEEcCCCCcEEEEEE-------------------HHHH
Confidence 456666 7986 79999999999999999999999 9999999885 9999965 4555
Q ss_pred hhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCc
Q 016003 263 MAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAE 342 (397)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
+..+.. + . ..+...+|. +
T Consensus 94 ~~~~~~------------------~-~------------------------------------------~~~v~~im~-~ 111 (156)
T 3oi8_A 94 LKYMFN------------------P-E------------------------------------------QFHLKSILR-P 111 (156)
T ss_dssp GGGSSC------------------G-G------------------------------------------GCCHHHHCB-C
T ss_pred HHHHHc------------------C-C------------------------------------------cccHHHHcC-C
Confidence 442110 0 0 000112454 4
Q ss_pred cEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHH
Q 016003 343 AIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLL 386 (397)
Q Consensus 343 ~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl 386 (397)
++++++++++.+++.+|.+++++++||+|++|+++||||+.||+
T Consensus 112 ~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 112 AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 89999999999999999999999999999999999999999986
No 43
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.68 E-value=2.3e-16 Score=141.02 Aligned_cols=125 Identities=17% Similarity=0.264 Sum_probs=101.4
Q ss_pred CCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhh
Q 016003 187 LSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYI 266 (397)
Q Consensus 187 ~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~ 266 (397)
.++++ +|+++++++++++++.+|+++|.++++ +++||+|++|+++|+ ++.+|++.++
T Consensus 9 ~~v~~--im~~~~~~v~~~~~l~ea~~~~~~~~~--~~~pVvd~~g~~vGi-------------------vt~~dl~~~~ 65 (184)
T 1pvm_A 9 MRVEK--IMNSNFKTVNWNTTVFDAVKIMNENHL--YGLVVKDDNGNDVGL-------------------LSERSIIKRF 65 (184)
T ss_dssp CBGGG--TSBTTCCEEETTCBHHHHHHHHHHHTC--CEEEEECTTSCEEEE-------------------EEHHHHHHHT
T ss_pred cCHHH--hcCCCCeEECCCCcHHHHHHHHHHcCC--CEEEEEcCCCcEEEE-------------------EeHHHHHHHH
Confidence 55665 799999999999999999999999999 999999988999999 4566666522
Q ss_pred ccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEe
Q 016003 267 DCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVC 346 (397)
Q Consensus 267 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~ 346 (397)
.. . . ... . ..+...+|..+++++
T Consensus 66 ~~-----------------~---------~---~~~--------------------~--------~~~v~~im~~~~~~v 88 (184)
T 1pvm_A 66 IP-----------------R---------N---KKP--------------------D--------EVPIRLVMRKPIPKV 88 (184)
T ss_dssp GG-----------------G---------C---CCG--------------------G--------GSBGGGTSBSSCCEE
T ss_pred hh-----------------c---------c---cCc--------------------c--------cCCHHHHhCCCCcEE
Confidence 10 0 0 000 0 001123577799999
Q ss_pred CCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 347 HPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 347 ~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
++++++.+++++|.+++++++||+|++|+++|+||..||++++.+
T Consensus 89 ~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 89 KSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp ETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 999999999999999999999999998999999999999998766
No 44
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.68 E-value=1.9e-16 Score=133.77 Aligned_cols=123 Identities=15% Similarity=0.193 Sum_probs=97.7
Q ss_pred CccccCCCC---cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhh
Q 016003 188 SIDSLGIIS---TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMA 264 (397)
Q Consensus 188 ti~~L~~~~---~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~ 264 (397)
++++ +|+ ++++++++++++.+|++.|.++++ +++||+| +|+++|+ ++.+|++.
T Consensus 7 ~v~~--im~~~~~~~~~v~~~~~~~~a~~~~~~~~~--~~~~Vvd-~~~~~Gi-------------------vt~~dl~~ 62 (135)
T 2rc3_A 7 TVKH--LLQEKGHTVVAIGPDDSVFNAMQKMAADNI--GALLVMK-DEKLVGI-------------------LTERDFSR 62 (135)
T ss_dssp BHHH--HHHHHCCCCCEECTTSBHHHHHHHHHHHTC--SEEEEEE-TTEEEEE-------------------EEHHHHHH
T ss_pred eHHH--HHhcCCCCcEEECCCCcHHHHHHHHHhcCC--CEEEEEE-CCEEEEE-------------------EehHHHHH
Confidence 4444 687 889999999999999999999999 9999999 8999999 45666664
Q ss_pred h-hccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCcc
Q 016003 265 Y-IDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEA 343 (397)
Q Consensus 265 ~-~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
. ... +.. + . .....++|..++
T Consensus 63 ~~~~~------------------~~~------------~--------------~--------------~~~v~~~m~~~~ 84 (135)
T 2rc3_A 63 KSYLL------------------DKP------------V--------------K--------------DTQVKEIMTRQV 84 (135)
T ss_dssp HGGGS------------------SSC------------G--------------G--------------GSBGGGTSBCSC
T ss_pred HHHHc------------------CCC------------c--------------c--------------cCCHHHhccCCC
Confidence 1 110 000 0 0 001123577899
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++|++++++.+++++|.+++++++||+| +|+++|+||..||++++.++.
T Consensus 85 ~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~~ 133 (135)
T 2rc3_A 85 AYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQH 133 (135)
T ss_dssp CCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC--
T ss_pred eEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhcc
Confidence 9999999999999999999999999999 699999999999999987654
No 45
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.68 E-value=2.6e-16 Score=136.31 Aligned_cols=132 Identities=21% Similarity=0.224 Sum_probs=101.8
Q ss_pred ccCCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhh
Q 016003 185 PALSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDL 262 (397)
Q Consensus 185 ~~~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl 262 (397)
...++++ +|++ +++++.+++++.+|++.|.++++ +++||+|++|+++|+ ++.+|+
T Consensus 9 ~~~~v~~--im~~~~~~~~v~~~~~~~~a~~~m~~~~~--~~~pVvd~~~~~~Gi-------------------vt~~dl 65 (157)
T 2emq_A 9 MQMTVKP--FLIPADKVAHVQPGNYLDHALLVLTKTGY--SAIPVLDTSYKLHGL-------------------ISMTMM 65 (157)
T ss_dssp -CCBSTT--TCEEGGGSCCBCTTSBHHHHHHHHHHSSS--SEEEEECTTCCEEEE-------------------EEHHHH
T ss_pred hhCcHHh--hccCCccceEECCCCcHHHHHHHHHHCCc--eEEEEEcCCCCEEEE-------------------eeHHHH
Confidence 3455665 7886 89999999999999999999999 999999999999999 456666
Q ss_pred hhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCc
Q 016003 263 MAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAE 342 (397)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
+.++..... .. . ..+ . ..+...+|..+
T Consensus 66 ~~~~~~~~~----------------~~-~-------------------------~~~---~--------~~~v~~~m~~~ 92 (157)
T 2emq_A 66 MDAILGLER----------------IE-F-------------------------ERL---E--------TMKVEEVMNRN 92 (157)
T ss_dssp HHHSBCSSS----------------BC-G-------------------------GGG---G--------TCBGGGTCBCC
T ss_pred HHHHhcccc----------------cc-h-------------------------HHh---c--------CCcHHHHhCCC
Confidence 653211000 00 0 000 0 00122457789
Q ss_pred cEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHh
Q 016003 343 AIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLE 394 (397)
Q Consensus 343 ~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~ 394 (397)
+++|++++++.+++.+|.++++ +||||++|+++|+||.+||++++.+..+
T Consensus 93 ~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 93 IPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp CCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTC
T ss_pred CceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhh
Confidence 9999999999999999999998 9999988999999999999999987654
No 46
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.67 E-value=2.3e-16 Score=136.07 Aligned_cols=120 Identities=28% Similarity=0.381 Sum_probs=98.2
Q ss_pred cCCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 186 ALSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 186 ~~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
..++++ +|++ +++++.+++++.+|++.|.++++ +.+||+|++|+++|+ +|.+|++
T Consensus 27 ~~~v~d--im~~~~~~~~v~~~~~~~~a~~~m~~~~~--~~~~Vvd~~~~~~Gi-------------------vt~~dl~ 83 (149)
T 3k2v_A 27 LLRVND--IMHTGDEIPHVGLQATLRDALLEITRKNL--GMTAICDDDMNIIGI-------------------FTDGDLR 83 (149)
T ss_dssp TSBGGG--TSBCGGGSCEECTTCBHHHHHHHHHHHTS--SEEEEECTTCBEEEE-------------------EEHHHHH
T ss_pred ccCHHH--HhcCCCCCeEECCCCcHHHHHHHHHhCCC--cEEEEECCCCcEEEE-------------------ecHHHHH
Confidence 456776 7998 89999999999999999999999 999999999999999 5567776
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCcc
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEA 343 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
..+..+ . .+ . ..+...+|..++
T Consensus 84 ~~~~~~------------------~------------~~--------------------~--------~~~v~~~m~~~~ 105 (149)
T 3k2v_A 84 RVFDTG------------------V------------DM--------------------R--------DASIADVMTRGG 105 (149)
T ss_dssp HHHCSS------------------S------------CC--------------------T--------TCBHHHHSEESC
T ss_pred HHHhcC------------------C------------Cc--------------------c--------cCcHHHHcCCCC
Confidence 533110 0 00 0 011224577889
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHH
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLK 387 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~ 387 (397)
++|++++++.+++.+|.+++++++||+|++ +++|+||..||++
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 999999999999999999999999999986 9999999999986
No 47
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.67 E-value=5.8e-16 Score=144.69 Aligned_cols=202 Identities=14% Similarity=0.099 Sum_probs=129.4
Q ss_pred ccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCC
Q 016003 6 LADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNS 85 (397)
Q Consensus 6 ~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l 85 (397)
...+|+|+|. ++++++++++++.+|+++|.++++.++||+|. +++++|+++..|+++++......
T Consensus 5 ~~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-------------~~~l~Giit~~di~~~~~~~~~~ 69 (245)
T 3l2b_A 5 VKLKVEDLEM--DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-------------NNHLLGMLSTSNITATYMDIWDS 69 (245)
T ss_dssp CCCBGGGSCC--BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-------------TCBEEEEEEHHHHHHHHHCCCCT
T ss_pred ccCcHHHhcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-------------CCEEEEEEEHHHHHHHHHHhhhh
Confidence 3678999994 56899999999999999999999999999996 36899999999999988642110
Q ss_pred CChhhhhcCC--------------------------------hhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEE
Q 016003 86 LSPSLALKQP--------------------------------VSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLV 132 (397)
Q Consensus 86 ~~~~~~~~~~--------------------------------V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~ 132 (397)
+.......+ ...++..-.++.++.+. . -.++...+. +|+.-+.
T Consensus 70 -~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvg--d-r~~~~~~~i~~~~~~li 145 (245)
T 3l2b_A 70 -NILAKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAG--D-RAEIQAELIELKVSLLI 145 (245)
T ss_dssp -THHHHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEEC--S-CHHHHHHHHHTTCSEEE
T ss_pred -hhhhhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEEC--C-CHHHHHHHHHcCCCEEE
Confidence 000000111 11111111123344442 1 255666555 6777665
Q ss_pred EeccCcchhhhhhhcccccccccCCCCceeeeecHHHHHHHHHhccCCCCCCccCCccccCCCC-cCeEEEeCCCcHHHH
Q 016003 133 VPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFILSSISLFSPIPALSIDSLGIIS-TDVVAVDYHSPASLA 211 (397)
Q Consensus 133 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~l~~~~~~l~~l~~~ti~~L~~~~-~~v~tv~~~~~~~~a 211 (397)
+.............. .......+.|..|......... ...++++ +|+ ++++++++++++.+|
T Consensus 146 it~~~~~~~~v~~~a---------~~~~~~~i~t~~d~~~~~~~~~------~~~~v~~--im~~~~~~~~~~~~~~~~~ 208 (245)
T 3l2b_A 146 VTGGHTPSKEIIELA---------KKNNITVITTPHDSFTASRLIV------QSLPVDY--VMTKDNLVAVSTDDLVEDV 208 (245)
T ss_dssp ECTTCCCCHHHHHHH---------HHHTCEEEECSSCHHHHHHHGG------GGSBHHH--HSBCTTCCCEETTSBHHHH
T ss_pred ECCCCCCCHHHHHHH---------HHcCCeEEEeCCChHHHHHHHh------cCCceee--EecCCccEEECCCCcHHHH
Confidence 543211100000000 0112233666666654432111 1345666 799 899999999999999
Q ss_pred HHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccC
Q 016003 212 LEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGC 245 (397)
Q Consensus 212 ~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~ 245 (397)
+++|.++++ +++||||++|+++|+||.+||.+
T Consensus 209 ~~~m~~~~~--~~~pVvd~~~~~~Giit~~dll~ 240 (245)
T 3l2b_A 209 KVTMSETRY--SNYPVIDENNKVVGSIARFHLIS 240 (245)
T ss_dssp HHHHHHHCC--SEEEEECTTCBEEEEEECC----
T ss_pred HHHHHhcCC--ceEEEEcCCCeEEEEEEHHHhhc
Confidence 999999999 99999999999999999888876
No 48
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.67 E-value=1e-16 Score=138.95 Aligned_cols=131 Identities=18% Similarity=0.271 Sum_probs=101.0
Q ss_pred cCCccccCCCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 186 ALSIDSLGIIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 186 ~~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
..++++ +|+ ++++++.+++++.+|++.|.++++ +++||+|++|+++|+| +.+|++
T Consensus 14 ~~~v~d--im~p~~~~~~v~~~~~l~~a~~~m~~~~~--~~~~Vvd~~~~~~Gii-------------------t~~dl~ 70 (156)
T 3ctu_A 14 LGQEET--FLTPAKNLAVLIDTHNADHATLLLSQMTY--TRVPVVTDEKQFVGTI-------------------GLRDIM 70 (156)
T ss_dssp HTTGGG--GEEEGGGCCCEETTSBHHHHHHHHTTCSS--SEEEEECC-CBEEEEE-------------------EHHHHH
T ss_pred HHHHHH--HcCcccCceEECCCCCHHHHHHHHHHCCC--ceEeEECCCCEEEEEE-------------------cHHHHH
Confidence 345655 688 689999999999999999999999 9999999999999994 566666
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCcc
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEA 343 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
..+... .... +.+ .. .+...+|..++
T Consensus 71 ~~~~~~-----------------~~~~--------------------------~~~---~~--------~~v~~~m~~~~ 96 (156)
T 3ctu_A 71 AYQMEH-----------------DLSQ--------------------------EIM---AD--------TDIVHMTKTDV 96 (156)
T ss_dssp HHHHHH-----------------TCCH--------------------------HHH---TT--------SBGGGGCBCSC
T ss_pred HHHHhc-----------------cccc--------------------------ccc---cc--------CcHHHhccCCc
Confidence 532100 0000 000 00 01123577899
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHhh
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLET 395 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~~ 395 (397)
++|++++++.+++..|.+++ ++||||++|+++|+||.+||++++.+.++.
T Consensus 97 ~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 97 AVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp CCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC
T ss_pred eeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 99999999999999999987 799999889999999999999999887654
No 49
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.67 E-value=1.8e-16 Score=138.00 Aligned_cols=134 Identities=19% Similarity=0.202 Sum_probs=103.5
Q ss_pred CCccCCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChh
Q 016003 183 PIPALSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAG 260 (397)
Q Consensus 183 ~l~~~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~ 260 (397)
.+...++++ +|++ +++++.+++++.+|++.|.++++ +++||+|++|+++|+ ++.+
T Consensus 10 ~l~~~~v~~--im~~~~~~~~v~~~~~l~~a~~~m~~~~~--~~~pVvd~~~~lvGi-------------------vt~~ 66 (159)
T 1yav_A 10 QLLEATVGQ--FMIEADKVAHVQVGNNLEHALLVLTKTGY--TAIPVLDPSYRLHGL-------------------IGTN 66 (159)
T ss_dssp -CTTCBHHH--HSEEGGGSCCEETTCBHHHHHHHHHHHCC--SEEEEECTTCBEEEE-------------------EEHH
T ss_pred HHhHhhHHH--HhCCccceEEECCCCcHHHHHHHHHhCCC--cEEEEECCCCCEEEE-------------------eEHH
Confidence 344567766 6887 89999999999999999999999 999999999999999 4566
Q ss_pred hhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcC
Q 016003 261 DLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRR 340 (397)
Q Consensus 261 Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (397)
|++.++.... .+. . .. . ...+..++|.
T Consensus 67 dl~~~~~~~~----------------~~~-~-------------------------~~-----~------~~~~v~~~m~ 93 (159)
T 1yav_A 67 MIMNSIFGLE----------------RIE-F-------------------------EK-----L------DQITVEEVML 93 (159)
T ss_dssp HHHHHHBCSS----------------SBC-G-------------------------GG-----T------TTSBHHHHSB
T ss_pred HHHHHhhhhc----------------ccc-h-------------------------hh-----h------ccCCHHHhcC
Confidence 6665321100 000 0 00 0 0111234678
Q ss_pred CccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHh
Q 016003 341 AEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLE 394 (397)
Q Consensus 341 ~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~ 394 (397)
.++++|++++++.+++.+|.++++ +||+|++|+++|+||++||++++.+.+.
T Consensus 94 ~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~ 145 (159)
T 1yav_A 94 TDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIR 145 (159)
T ss_dssp CSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred CCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHH
Confidence 899999999999999999999987 9999988999999999999999987654
No 50
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=5e-16 Score=135.09 Aligned_cols=141 Identities=16% Similarity=0.168 Sum_probs=101.9
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCE-EEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTS-VAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMA 264 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~-vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~ 264 (397)
..++++ +|+++++++.+++++.+|++.|.++++ ++ +||+|++ +++|+|| .+|++.
T Consensus 15 ~~~v~~--im~~~~~~v~~~~tl~ea~~~m~~~~~--~~~~~Vvd~~-~~vGivt-------------------~~dl~~ 70 (157)
T 1o50_A 15 VKDVCK--LISLKPTVVEEDTPIEEIVDRILEDPV--TRTVYVARDN-KLVGMIP-------------------VMHLLK 70 (157)
T ss_dssp HHHHTT--SSCCCCEEECTTCBHHHHHHHHHHSTT--CCEEEEEETT-EEEEEEE-------------------HHHHHH
T ss_pred cccHhh--cccCCCceECCCCCHHHHHHHHHhCCC--CccEEEEECC-EEEEEEE-------------------HHHHHH
Confidence 344554 899999999999999999999999999 99 9999988 9999965 455544
Q ss_pred hhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccE
Q 016003 265 YIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAI 344 (397)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 344 (397)
.+.. .+ ...+... ..+.. ...........++|.. ++
T Consensus 71 ~~~~-------------~~-~~~~~~~-~~~~~----------------------------~~~~~~~~~v~~im~~-~~ 106 (157)
T 1o50_A 71 VSGF-------------HF-FGFIPKE-ELIRS----------------------------SMKRLIAKNASEIMLD-PV 106 (157)
T ss_dssp HHHH-------------HH-HCCCC------------------------------------CCCCCSSCBHHHHCBC-CC
T ss_pred HHhh-------------hH-HhhhccH-HHHHH----------------------------HHHHHcCCcHHHHcCC-Ce
Confidence 2110 00 0000000 00000 0000001223456788 99
Q ss_pred EeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHh
Q 016003 345 VCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLE 394 (397)
Q Consensus 345 t~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~ 394 (397)
+|++++++.+++++|.+++++++||+|++|+++|+||+.||++++.++++
T Consensus 107 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~~ 156 (157)
T 1o50_A 107 YVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGRE 156 (157)
T ss_dssp CBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSCC
T ss_pred EECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhhc
Confidence 99999999999999999999999999988999999999999999987543
No 51
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.67 E-value=9.6e-17 Score=142.95 Aligned_cols=122 Identities=21% Similarity=0.252 Sum_probs=99.5
Q ss_pred cCCccccCCCC--cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC-CcEEEeeccCcccCcchhHHHHHhhcChhhh
Q 016003 186 ALSIDSLGIIS--TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD-GFLIGEISPSTLGCCDETVAAAITTLSAGDL 262 (397)
Q Consensus 186 ~~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~-g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl 262 (397)
..++++ +|+ ++++++.+++++.+|++.|.++++ +++||+|++ |+++|+ ++.+|+
T Consensus 35 ~~~v~d--iM~~~~~v~~v~~~~tv~ea~~~m~~~~~--~~~pVvd~~~~~lvGi-------------------vt~~Dl 91 (173)
T 3ocm_A 35 ERSIRS--IMTPRTDVSWVNIDDDAATIRQQLTAAPH--SFFPVCRGSLDEVVGI-------------------GRAKDL 91 (173)
T ss_dssp TSCSTT--TSEEGGGCCCEETTSCHHHHHHHHHHSSC--SEEEEESSSTTSEEEE-------------------EEHHHH
T ss_pred CCCHHH--hCCcHHHeEEEeCCCCHHHHHHHHHhCCC--CEEEEEeCCCCCEEEE-------------------EEHHHH
Confidence 455655 787 479999999999999999999999 999999987 899999 556777
Q ss_pred hhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCc
Q 016003 263 MAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAE 342 (397)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
+..... . . ... .. |..+
T Consensus 92 ~~~~~~-------------~-------------~---------------------------~~~--------v~--~~~~ 108 (173)
T 3ocm_A 92 VADLIT-------------E-------------G---------------------------RVR--------RN--RLRD 108 (173)
T ss_dssp HHHHHH-------------H-------------S---------------------------SCC--------GG--GSBC
T ss_pred HHHHhc-------------C-------------C---------------------------cch--------hH--hcCC
Confidence 652210 0 0 000 11 3467
Q ss_pred cEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 343 AIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 343 ~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++++++++++.+++.+|.+++++++||+|++|+++||||+.||++++...+
T Consensus 109 ~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 109 PIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp CCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCC
T ss_pred CeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcC
Confidence 899999999999999999999999999999999999999999999998653
No 52
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.66 E-value=5.5e-16 Score=142.45 Aligned_cols=114 Identities=17% Similarity=0.262 Sum_probs=96.7
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCc
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPE 273 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~ 273 (397)
+|.++++++.+++++.+|+++|.++++ +++||+|++|+++|+|| .+|++.....
T Consensus 18 ~~~~~~~~v~~~~tv~ea~~~m~~~~~--~~~pVvd~~~~l~Givt-------------------~~dl~~~~~~----- 71 (213)
T 1vr9_A 18 WVTQDFPMVEESATVRECLHRMRQYQT--NECIVKDREGHFRGVVN-------------------KEDLLDLDLD----- 71 (213)
T ss_dssp GCBSCSCEEETTCBHHHHHHHHHHTTS--SEEEEECTTSBEEEEEE-------------------GGGGTTSCTT-----
T ss_pred hhcCCCeEECCCCcHHHHHHHHHHCCC--CEEEEEcCCCEEEEEEE-------------------HHHHHhhcCC-----
Confidence 789999999999999999999999999 99999998899999965 4444431100
Q ss_pred hhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCcHH
Q 016003 274 DLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLM 353 (397)
Q Consensus 274 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~ 353 (397)
. . ..++|+.+++++++++++.
T Consensus 72 --------------------------~-------------------------~--------v~~im~~~~~~v~~~~~l~ 92 (213)
T 1vr9_A 72 --------------------------S-------------------------S--------VFNKVSLPDFFVHEEDNIT 92 (213)
T ss_dssp --------------------------S-------------------------B--------SGGGCBCTTCCEETTSBHH
T ss_pred --------------------------C-------------------------c--------HHHHccCCCEEECCCCcHH
Confidence 0 0 1124677899999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHH
Q 016003 354 AVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKH 392 (397)
Q Consensus 354 ~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~ 392 (397)
+++++|.+++++++||+|++|+++|+||..||++++...
T Consensus 93 ~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 93 HALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp HHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 999999999999999999989999999999999988653
No 53
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.66 E-value=5.6e-16 Score=144.78 Aligned_cols=57 Identities=14% Similarity=0.190 Sum_probs=46.7
Q ss_pred hhhhcC-CccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 335 ARMVRR-AEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 335 ~~~~~~-~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
..++|+ .+++++++++++.+++++|.+++++++||||++|+++|+||+.|++++..+
T Consensus 187 v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~~~ 244 (245)
T 3l2b_A 187 VDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHKK 244 (245)
T ss_dssp HHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC--------
T ss_pred eeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchhhc
Confidence 456788 899999999999999999999999999999999999999999999987643
No 54
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.66 E-value=5e-16 Score=135.10 Aligned_cols=130 Identities=10% Similarity=0.183 Sum_probs=98.2
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcC--CCcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDS--DGFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~--~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
..++++ +|+++++++++++++.+|++.|.++++ +++||+|+ +|+++|+|| .+|++
T Consensus 12 ~~~v~d--im~~~~~~v~~~~~~~~a~~~~~~~~~--~~~pVvd~~~~~~~~Givt-------------------~~dl~ 68 (164)
T 2pfi_A 12 HVRVEH--FMNHSITTLAKDTPLEEVVKVVTSTDV--TEYPLVESTESQILVGIVQ-------------------RAQLV 68 (164)
T ss_dssp SCBHHH--HCBCCCCCEETTCBHHHHHHHHHTCCC--SEEEEESCTTTCBEEEEEE-------------------HHHHH
T ss_pred CCCHHH--HcCCCCeEECCCCcHHHHHHHHHhCCC--CceeEEecCCCCEEEEEEE-------------------HHHHH
Confidence 455665 799999999999999999999999999 99999997 789999954 56665
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCc-
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAE- 342 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (397)
.......+ .. .. . . ......+|..+
T Consensus 69 ~~~~~~~~------------------~~---~~-----~--------------------~--------~~~v~~~m~~~~ 94 (164)
T 2pfi_A 69 QALQAEPP------------------SR---AP-----G--------------------H--------QQCLQDILARGC 94 (164)
T ss_dssp HHHHC---------------------------------C--------------------C--------CCBHHHHHHTTC
T ss_pred HHHHhhcc------------------cc---CC-----c--------------------c--------cchhhhhhcccc
Confidence 43211000 00 00 0 0 00001122222
Q ss_pred -----cEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 343 -----AIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 343 -----~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
+++|++++++.+++.+|.+++++++||+| +|+++||||..||++++.+..
T Consensus 95 ~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 95 PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhh
Confidence 79999999999999999999999999999 689999999999999998764
No 55
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.65 E-value=5.9e-16 Score=130.37 Aligned_cols=126 Identities=17% Similarity=0.167 Sum_probs=104.9
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
.|...+|+|+|...++++++++++|+.+|++.|.++++.++||+|.+ .++++|+|+..|++.++.+..
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~------------~~~~~Givt~~dl~~~~~~~~ 69 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQ------------KDNIIGFVHRLELFKMQQSGS 69 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSS------------TTCEEEECCHHHHHHHHHTTT
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC------------CCcEEEEEEHHHHHHHHhcCC
Confidence 46788999999766778999999999999999999999999999963 268999999999999876531
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
...+++++|. . ++++.+++++.+|++.|. +++++++|++++ |+.+
T Consensus 70 --------~~~~v~~~m~-~----~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~---------------------g~~v 115 (130)
T 3i8n_A 70 --------GQKQLGAVMR-P----IQVVLNNTALPKVFDQMMTHRLQLALVVDEY---------------------GTVL 115 (130)
T ss_dssp --------TTSBHHHHSE-E----CCEEETTSCHHHHHHHHHHHTCCEEEEECTT---------------------SCEE
T ss_pred --------CcCCHHHHhc-C----CcCcCCCCcHHHHHHHHHHcCCeEEEEEcCC---------------------CCEE
Confidence 2568999993 2 689999999999999999 799999988532 4678
Q ss_pred eeecHHHHHHHHH
Q 016003 163 CWLTQEDIIRFIL 175 (397)
Q Consensus 163 ~IITq~DIi~~l~ 175 (397)
|+||..||++.+.
T Consensus 116 Givt~~dil~~l~ 128 (130)
T 3i8n_A 116 GLVTLEDIFEHLV 128 (130)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEEHHHHHHHHc
Confidence 9999999999985
No 56
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.64 E-value=1.9e-15 Score=129.99 Aligned_cols=126 Identities=16% Similarity=0.172 Sum_probs=108.7
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
-|...+|+|+|....+++++++++|+.+|++.|.++++.++||+|.+ .++++|+|+..|++.++....
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~------------~~~lvGivt~~dl~~~~~~~~ 86 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKN------------KDDILGFVHIRDLYNQKINEN 86 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSS------------TTSEEEEEEHHHHHHHHHHHS
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC------------CCcEEEEEEHHHHHHHHhcCC
Confidence 35678899999654489999999999999999999999999999963 158999999999999876531
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
+.+++++| .. ++++.+++++.+|++.|. +++++++|++++ |+.+
T Consensus 87 ---------~~~v~~~m-~~----~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~---------------------g~~~ 131 (148)
T 3lv9_A 87 ---------KIELEEIL-RD----IIYISENLTIDKALERIRKEKLQLAIVVDEY---------------------GGTS 131 (148)
T ss_dssp ---------CCCGGGTC-BC----CEEEETTSBHHHHHHHHHHHTCSEEEEECTT---------------------SSEE
T ss_pred ---------CccHHHhc-CC----CeEECCCCCHHHHHHHHHhcCCeEEEEEeCC---------------------CCEE
Confidence 56899999 54 789999999999999999 799999998632 4678
Q ss_pred eeecHHHHHHHHHh
Q 016003 163 CWLTQEDIIRFILS 176 (397)
Q Consensus 163 ~IITq~DIi~~l~~ 176 (397)
|+||..||++.+..
T Consensus 132 Giit~~dil~~l~~ 145 (148)
T 3lv9_A 132 GVVTIEDILEEIVG 145 (148)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEEEHHHHHHHHhC
Confidence 99999999999864
No 57
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=8.2e-16 Score=129.86 Aligned_cols=125 Identities=13% Similarity=0.105 Sum_probs=105.0
Q ss_pred chhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCC
Q 016003 8 DEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLS 87 (397)
Q Consensus 8 ~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~ 87 (397)
.+|+|+|...++++++++++|+.+|++.|.+++++++||++.+ +++++|+|+..|++.++.++...
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~------------~~~lvGivt~~dl~~~~~~~~~~-- 67 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDS------------LDDAISMLRVREAYRLMTEKKEF-- 67 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSS------------GGGEEEEEEHHHHHHHHTSSSCC--
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCC------------CCcEEEEEEHHHHHHHHhccCcc--
Confidence 5799999755679999999999999999999999999999742 36899999999999988653211
Q ss_pred hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeec
Q 016003 88 PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLT 166 (397)
Q Consensus 88 ~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IIT 166 (397)
...+++++| .. ++++.+++++.+|++.|. +++++++|.+++ |+.+||||
T Consensus 68 ----~~~~v~~~m-~~----~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~---------------------g~lvGiit 117 (130)
T 3hf7_A 68 ----TKEIMLRAA-DE----IYFVPEGTPLSTQLVKFQRNKKKVGLVVDEY---------------------GDIQGLVT 117 (130)
T ss_dssp ----CHHHHHHHS-BC----CCEEETTCBHHHHHHHHHHHCCCEEEEECTT---------------------SCEEEEEE
T ss_pred ----chhhHHHhc-cC----CeEeCCCCcHHHHHHHHHhcCCeEEEEEcCC---------------------CCEEEEee
Confidence 135789999 33 688999999999999999 799999987532 46789999
Q ss_pred HHHHHHHHHh
Q 016003 167 QEDIIRFILS 176 (397)
Q Consensus 167 q~DIi~~l~~ 176 (397)
..||++.+.+
T Consensus 118 ~~Dil~~l~g 127 (130)
T 3hf7_A 118 VEDILEEIVG 127 (130)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999863
No 58
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.64 E-value=5.6e-16 Score=146.38 Aligned_cols=55 Identities=11% Similarity=0.071 Sum_probs=50.2
Q ss_pred hcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 338 VRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 338 ~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
.|...++|+.++++|.+|+.+|...+++|+||++. |+|+||||+.||++++....
T Consensus 194 ~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~-GrLVGIVTrkDl~kai~~~~ 248 (250)
T 2d4z_A 194 RIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSM-GKLVGVVALAEIQAAIEGSY 248 (250)
T ss_dssp CEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHHC--
T ss_pred cccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEEC-CEEEEEEEHHHHHHHHHHHh
Confidence 47889999999999999999999999999999985 89999999999999997543
No 59
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.63 E-value=9e-16 Score=132.00 Aligned_cols=135 Identities=16% Similarity=0.116 Sum_probs=110.9
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
.|.+++|+|+|..+.+++++++++|+.+|++.|.++++.++||+|. +++++|+|+..||+.++....
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-------------~~~~~Givt~~dl~~~~~~~~ 77 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-------------MYKLHGLISTAMILDGILGLE 77 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-------------TCBEEEEEEHHHHHHHTBCSS
T ss_pred hhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC-------------CCCEEEEEEHHHHHHHHHhhc
Confidence 4678899999975557999999999999999999999999999996 368999999999999986532
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
.. ........+|+++|... ++++.+++++.+|++.|. +++ ++|+++ +|+.+
T Consensus 78 ~~-~~~~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~---------------------~g~~~ 129 (150)
T 3lqn_A 78 RI-EFERLEEMKVEQVMKQD----IPVLKLEDSFAKALEMTIDHPF--ICAVNE---------------------DGYFE 129 (150)
T ss_dssp SB-CGGGGGGCBGGGTCBSS----CCEEETTCBHHHHHHHHHHCSE--EEEECT---------------------TCBEE
T ss_pred cc-chhHHhcCCHHHHhcCC----CceeCCCCCHHHHHHHHHhCCE--EEEECC---------------------CCcEE
Confidence 21 12334578999999754 899999999999999999 564 777652 25688
Q ss_pred eeecHHHHHHHHHhccC
Q 016003 163 CWLTQEDIIRFILSSIS 179 (397)
Q Consensus 163 ~IITq~DIi~~l~~~~~ 179 (397)
|+||+.||++++.+...
T Consensus 130 Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 130 GILTRRAILKLLNKKVR 146 (150)
T ss_dssp EEEEHHHHHHHHHHHC-
T ss_pred EEEEHHHHHHHHHHHhH
Confidence 99999999999987543
No 60
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.63 E-value=9.8e-16 Score=132.91 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=94.2
Q ss_pred cCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCchhH
Q 016003 197 TDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLV 276 (397)
Q Consensus 197 ~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~ 276 (397)
++++++.+++++.+|++.|.++++ +.+||+| +|+++|+ ++.+|++..+...
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~--~~~~V~~-~~~~~Gi-------------------vt~~dl~~~~~~~------- 71 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGI--GALLVVD-GDDIAGI-------------------VTERDYARKVVLQ------- 71 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTC--SEEEEES-SSSEEEE-------------------EEHHHHHHHSGGG-------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCC--CEEEEee-CCEEEEE-------------------EEHHHHHHHHHhc-------
Confidence 568999999999999999999999 9999965 7899999 5567766522100
Q ss_pred HHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCcHHHHH
Q 016003 277 RVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLMAVM 356 (397)
Q Consensus 277 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~~v~ 356 (397)
. . .. . ..+..++|..++++|++++++.+++
T Consensus 72 ----------~--------~----~~----------------------~------~~~v~~~m~~~~~~v~~~~~l~~~~ 101 (157)
T 4fry_A 72 ----------E--------R----SS----------------------K------ATRVEEIMTAKVRYVEPSQSTDECM 101 (157)
T ss_dssp ----------T--------C----CS----------------------S------SCBHHHHSBSSCCCBCTTSBHHHHH
T ss_pred ----------c--------C----Cc----------------------c------ccCHHHHcCCCCcEECCCCcHHHHH
Confidence 0 0 00 0 0112346788999999999999999
Q ss_pred HHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 357 IQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 357 ~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++|.+++++++||+| +|+++|+||+.||++++....
T Consensus 102 ~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 102 ALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp HHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 999999999999999 699999999999999998653
No 61
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.62 E-value=1.3e-15 Score=135.19 Aligned_cols=149 Identities=16% Similarity=0.146 Sum_probs=102.1
Q ss_pred cCCccccCCCCcC----eEEE--eCCCcHHHHHHHHHhcCCCCCEEEEE--cCCCcEEEeeccCcccCcchhHHHHHhhc
Q 016003 186 ALSIDSLGIISTD----VVAV--DYHSPASLALEAISRSLFDQTSVAVV--DSDGFLIGEISPSTLGCCDETVAAAITTL 257 (397)
Q Consensus 186 ~~ti~~L~~~~~~----v~tv--~~~~~~~~a~~~m~~~~i~~s~vpVV--d~~g~lvG~is~~dl~~~~~~~~~~~~~l 257 (397)
..++++ +|++. ++++ .+++++.+|+++|.++++ +++||+ |++|+++|+||
T Consensus 10 ~~~v~d--im~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~--~~~pVv~~d~~~~lvGiit------------------ 67 (185)
T 2j9l_A 10 KTLAMD--VMKPRRNDPLLTVLTQDSMTVEDVETIISETTY--SGFPVVVSRESQRLVGFVL------------------ 67 (185)
T ss_dssp CCBHHH--HSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCC--SEEEEESCTTTCBEEEEEE------------------
T ss_pred cCcHHH--HhcccccCceEEEecCCCccHHHHHHHHHhcCC--CceeEEEECCCCeEEEEEE------------------
Confidence 455665 68776 8888 999999999999999999 999999 78899999965
Q ss_pred ChhhhhhhhccCCCCchhHHHHHHHhhhcch-hhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhh
Q 016003 258 SAGDLMAYIDCGGPPEDLVRVVKERLKDKGL-EGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSAR 336 (397)
Q Consensus 258 s~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (397)
.+|++...... .....++ ......+... . .+ ............
T Consensus 68 -~~dl~~~~~~~------------~~~~~~~~~~~~~~~~~~---~--------------~~------~~~~~~~~~~v~ 111 (185)
T 2j9l_A 68 -RRDLIISIENA------------RKKQDGVVSTSIIYFTEH---S--------------PP------LPPYTPPTLKLR 111 (185)
T ss_dssp -HHHHHHHHHHH------------HTSCSCCCTTCEEECSSS---C--------------CC------CCTTCCCCEECG
T ss_pred -HHHHHHHHHhh------------cccCCCccccceeecccC---C--------------cc------cccccccCccHH
Confidence 45554422100 0000000 0000000000 0 00 000000112234
Q ss_pred hhcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 337 MVRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 337 ~~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
.+|..++++|++++++.+++.+|.+++++++||+| +|+++||||+.||++++.+..
T Consensus 112 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~~ 167 (185)
T 2j9l_A 112 NILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQMA 167 (185)
T ss_dssp GGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHC
T ss_pred HhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHhh
Confidence 56788999999999999999999999999999999 689999999999999998753
No 62
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.62 E-value=2.7e-15 Score=132.88 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=105.9
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
-|...+|+|+|...++++++++++|+.+|++.|.+++++++||+|.+ .++++|+|+..||+.++....
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~------------~~~lvGivt~~dl~~~~~~~~ 105 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNN------------VDDMVGIISAKQLLSESIAGE 105 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSS------------TTSEEEEEEHHHHHHHHHTTC
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC------------CCeEEEEEEHHHHHHHHhhcC
Confidence 35678899999755789999999999999999999999999999963 168999999999999876521
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
+.+|+++| .. ++++.+++++.+|++.|. +++++++|++++ |+.+
T Consensus 106 ---------~~~v~~im-~~----~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~---------------------g~lv 150 (172)
T 3lhh_A 106 ---------RLELVDLV-KN----CNFVPNSLSGMELLEHFRTTGSQMVFVVDEY---------------------GDLK 150 (172)
T ss_dssp ---------CCCGGGGC-BC----CEEEETTCCHHHHHHHHHHHTCSEEEEECTT---------------------SCEE
T ss_pred ---------cccHHHHh-cC----CeEeCCCCCHHHHHHHHHHcCCeEEEEEeCC---------------------CCEE
Confidence 56899999 55 799999999999999999 799999988632 4678
Q ss_pred eeecHHHHHHHHHh
Q 016003 163 CWLTQEDIIRFILS 176 (397)
Q Consensus 163 ~IITq~DIi~~l~~ 176 (397)
||||..||++.+.+
T Consensus 151 Giit~~Dil~~l~~ 164 (172)
T 3lhh_A 151 GLVTLQDMMDALTG 164 (172)
T ss_dssp EEEEHHHHHHHHHT
T ss_pred EEeeHHHHHHHHhC
Confidence 99999999999874
No 63
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.61 E-value=2e-15 Score=130.85 Aligned_cols=125 Identities=18% Similarity=0.222 Sum_probs=107.5
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEE-ccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVW-DCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~-d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
|...+|+|+|....+++++++++|+.+|++.|.++++.++||+ +.+ +++++|+|+..||+.++....
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~------------~~~lvGivt~~dl~~~~~~~~ 84 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADND------------KDKIIGYAYNYDIVRQARIDD 84 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTE------------EEEEEEEEEHHHHHHHHHHHT
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCC------------CCcEEEEEEHHHHHhHHhcCC
Confidence 4567899999643479999999999999999999999999999 532 369999999999999876531
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
+.+|+++| .. ++++.+++++.+|++.|. +++++++|++++ |+.+
T Consensus 85 ---------~~~v~~~m-~~----~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~---------------------g~~v 129 (153)
T 3oco_A 85 ---------KAKISTIM-RD----IVSVPENMKVPDVMEEMSAHRVPMAIVIDEY---------------------GGTS 129 (153)
T ss_dssp ---------TSBGGGTC-BC----CEEEETTSBHHHHHHHHHHTTCSCEEEECTT---------------------SCEE
T ss_pred ---------CCcHHHHh-CC----CeEECCCCCHHHHHHHHHHcCCcEEEEEeCC---------------------CCEE
Confidence 56899999 54 899999999999999999 799999998632 4688
Q ss_pred eeecHHHHHHHHHh
Q 016003 163 CWLTQEDIIRFILS 176 (397)
Q Consensus 163 ~IITq~DIi~~l~~ 176 (397)
||||..||++.+..
T Consensus 130 Givt~~dil~~l~~ 143 (153)
T 3oco_A 130 GIITDKDVYEELFG 143 (153)
T ss_dssp EEECHHHHHHHHHC
T ss_pred EEeeHHHHHHHHhc
Confidence 99999999999874
No 64
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.61 E-value=3.9e-15 Score=125.20 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=107.8
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
|.+.+|+|+|. ++++++++++|+.+|++.|.++++..+||+| + ++++|+|+..|++.++..+.
T Consensus 1 l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-------------~~~~Givt~~dl~~~~~~~~- 63 (133)
T 2ef7_A 1 MEEEIVKEYMK--TQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G-------------NKPVGIITERDIVKAIGKGK- 63 (133)
T ss_dssp CCCCBGGGTSB--CSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T-------------TEEEEEEEHHHHHHHHHTTC-
T ss_pred CCcccHHHhcc--CCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-------------CEEEEEEcHHHHHHHHhcCC-
Confidence 45788999994 5689999999999999999999999999999 4 58999999999998876532
Q ss_pred CCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceee
Q 016003 85 SLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFC 163 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
....+++++|... ++++.+++++.+|++.|. ++.++++|++++ |+.+|
T Consensus 64 ------~~~~~v~~~~~~~----~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~---------------------g~~~G 112 (133)
T 2ef7_A 64 ------SLETKAEEFMTAS----LITIREDSPITGALALMRQFNIRHLPVVDDK---------------------GNLKG 112 (133)
T ss_dssp ------CTTCBGGGTSEEC----CCCEETTSBHHHHHHHHHHHTCSEEEEECTT---------------------SCEEE
T ss_pred ------CcccCHHHHcCCC----CEEECCCCCHHHHHHHHHHcCCCEEEEECCC---------------------CeEEE
Confidence 1247899999654 789999999999999999 799999988532 46789
Q ss_pred eecHHHHHHHHHhccCC
Q 016003 164 WLTQEDIIRFILSSISL 180 (397)
Q Consensus 164 IITq~DIi~~l~~~~~~ 180 (397)
+||..||++++.+....
T Consensus 113 iit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 113 IISIRDITRAIDDMFET 129 (133)
T ss_dssp EEEHHHHHHHHHHHC--
T ss_pred EEEHHHHHHHHHHHHHH
Confidence 99999999999876443
No 65
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.61 E-value=3.3e-15 Score=143.56 Aligned_cols=124 Identities=23% Similarity=0.220 Sum_probs=103.1
Q ss_pred CCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhc-----CCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhc
Q 016003 183 PIPALSIDSLGIISTDVVAVDYHSPASLALEAISRS-----LFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTL 257 (397)
Q Consensus 183 ~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~-----~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~l 257 (397)
.....++++ +|+++++++.+++++.+|++.|.++ ++ +.+||||++|+++|+||
T Consensus 133 ~~~~~~v~~--iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~--~~~pVvd~~~~lvGivt------------------ 190 (286)
T 2oux_A 133 HYEDETAGA--IMTTEFVSIVANQTVRSAMYVLKNQADMAETI--YYVYVVDQENHLVGVIS------------------ 190 (286)
T ss_dssp TSCTTBHHH--HCBSCCCEECSSSBHHHHHHHHHHHCSSCSCC--SEEEEECTTCBEEEEEE------------------
T ss_pred cCChHHHHH--hCCCCceEECCCCcHHHHHHHHHHcccCccce--eEEEEEcCCCeEEEEEE------------------
Confidence 345667766 7999999999999999999999988 77 89999999999999955
Q ss_pred ChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhh
Q 016003 258 SAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARM 337 (397)
Q Consensus 258 s~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (397)
.+|++.... . .....
T Consensus 191 -~~dll~~~~--------------------------------------------------------~--------~~v~~ 205 (286)
T 2oux_A 191 -LRDLIVNDD--------------------------------------------------------D--------TLIAD 205 (286)
T ss_dssp -HHHHTTSCT--------------------------------------------------------T--------SBHHH
T ss_pred -HHHHHcCCC--------------------------------------------------------C--------CcHHH
Confidence 555543100 0 00123
Q ss_pred hcCCccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 338 VRRAEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 338 ~~~~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
+|..++++|++++++.+++.+|.+++++++||||++|+++|+||..||++++.++.
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 57778999999999999999999999999999999999999999999999998764
No 66
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.61 E-value=3.4e-15 Score=125.63 Aligned_cols=123 Identities=15% Similarity=0.222 Sum_probs=104.5
Q ss_pred ccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCC
Q 016003 6 LADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNS 85 (397)
Q Consensus 6 ~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l 85 (397)
.+.+|+|+|...++++++++++|+.+|++.|.++++.++||+|.+ .++++|+|+..|++.++..
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~------------~~~~~Givt~~dl~~~~~~---- 66 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDD------------RDNIIGILLAKDLLRYMLE---- 66 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSS------------TTCEEEEEEGGGGGGGGTC----
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCC------------CCcEEEEEEHHHHHhHhcc----
Confidence 467899999765779999999999999999999999999999963 2689999999999987642
Q ss_pred CChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeee
Q 016003 86 LSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCW 164 (397)
Q Consensus 86 ~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 164 (397)
.+.+++++|.. ++++.+++++.+|++.|. ++.++++|++++ |+.+|+
T Consensus 67 ------~~~~v~~~m~~-----~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~---------------------g~~~Gi 114 (129)
T 3jtf_A 67 ------PALDIRSLVRP-----AVFIPEVKRLNVLLREFRASRNHLAIVIDEH---------------------GGISGL 114 (129)
T ss_dssp ------TTSCGGGGCBC-----CCEEETTCBHHHHHHHHHTSSCCEEEEECC----------------------CCEEEE
T ss_pred ------CCcCHHHHhCC-----CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCC---------------------CCEEEE
Confidence 14578999842 689999999999999999 789999988632 467899
Q ss_pred ecHHHHHHHHHh
Q 016003 165 LTQEDIIRFILS 176 (397)
Q Consensus 165 ITq~DIi~~l~~ 176 (397)
||..||++.+..
T Consensus 115 it~~Dil~~l~g 126 (129)
T 3jtf_A 115 VTMEDVLEQIVG 126 (129)
T ss_dssp EEHHHHHHHHHH
T ss_pred EEHHHHHHHHhC
Confidence 999999999864
No 67
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.60 E-value=3.3e-15 Score=129.46 Aligned_cols=137 Identities=17% Similarity=0.165 Sum_probs=111.2
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
.|...+++|+|..+++++++++++|+.+|++.|.++++.++||+|. +++++|+|+..||+.++....
T Consensus 11 ~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-------------~~~~~Giit~~dl~~~~~~~~ 77 (156)
T 3ctu_A 11 TFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-------------EKQFVGTIGLRDIMAYQMEHD 77 (156)
T ss_dssp HHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--------------CBEEEEEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC-------------CCEEEEEEcHHHHHHHHHhcc
Confidence 3556789999986678999999999999999999999999999996 368999999999999987532
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHhcCCceEEEeccCcchhhhhhhcccccccccCCCCceee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLMLGGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFC 163 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
. ........+|+++|... ++++.+++++.+|++.|.+. ++++|+++ +|+.+|
T Consensus 78 ~--~~~~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~~~~~-~~lpVvd~---------------------~g~~~G 129 (156)
T 3ctu_A 78 L--SQEIMADTDIVHMTKTD----VAVVSPDFTITEVLHKLVDE-SFLPVVDA---------------------EGIFQG 129 (156)
T ss_dssp C--CHHHHTTSBGGGGCBCS----CCCBCSSCCHHHHHHHTTTS-SEEEEECT---------------------TSBEEE
T ss_pred c--cccccccCcHHHhccCC----ceeeCCCCcHHHHHHHHHHc-CeEEEEcC---------------------CCeEEE
Confidence 1 12234478999999754 88999999999999999843 36777752 246889
Q ss_pred eecHHHHHHHHHhccCCC
Q 016003 164 WLTQEDIIRFILSSISLF 181 (397)
Q Consensus 164 IITq~DIi~~l~~~~~~l 181 (397)
+||+.||++++.+....+
T Consensus 130 iit~~dil~~l~~~~~~~ 147 (156)
T 3ctu_A 130 IITRKSILKAVNALLHDF 147 (156)
T ss_dssp EEETTHHHHHHHHHSCC-
T ss_pred EEEHHHHHHHHHHHHHhh
Confidence 999999999998765443
No 68
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.60 E-value=1.8e-15 Score=126.88 Aligned_cols=123 Identities=16% Similarity=0.181 Sum_probs=102.8
Q ss_pred cchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCC
Q 016003 7 ADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSL 86 (397)
Q Consensus 7 ~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~ 86 (397)
+.+|+|+|....+++++++++|+.+|++.|.++++.++||+|.+ .++++|+|+..|++.++....
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~------------~~~~vGivt~~dl~~~~~~~~--- 66 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISED------------KDHIEGILMAKDLLPFMRSDA--- 66 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS------------TTCEEEEEEGGGGGGGGSTTC---
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC------------CCcEEEEEEHHHHHHHHhccC---
Confidence 46899999654559999999999999999999999999999963 268999999999998875421
Q ss_pred ChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeee
Q 016003 87 SPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWL 165 (397)
Q Consensus 87 ~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~II 165 (397)
.+.+++++|.. ++++.+++++.+|++.|. +++++++|++++ |+.+|+|
T Consensus 67 -----~~~~v~~~m~~-----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---------------------g~~~Gii 115 (127)
T 3nqr_A 67 -----EAFSMDKVLRT-----AVVVPESKRVDRMLKEFRSQRYHMAIVIDEF---------------------GGVSGLV 115 (127)
T ss_dssp -----CCCCHHHHCBC-----CCEEETTCBHHHHHHHHHHTTCCEEEEECTT---------------------SCEEEEE
T ss_pred -----CCCCHHHHcCC-----CeEECCCCcHHHHHHHHHhcCCeEEEEEeCC---------------------CCEEEEE
Confidence 25689999932 578999999999999999 799999998632 4688999
Q ss_pred cHHHHHHHHH
Q 016003 166 TQEDIIRFIL 175 (397)
Q Consensus 166 Tq~DIi~~l~ 175 (397)
|+.||++.+.
T Consensus 116 t~~dll~~l~ 125 (127)
T 3nqr_A 116 TIEDILELIV 125 (127)
T ss_dssp EHHHHHHHC-
T ss_pred EHHHHHHHHh
Confidence 9999999864
No 69
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.59 E-value=5.2e-15 Score=122.43 Aligned_cols=119 Identities=17% Similarity=0.130 Sum_probs=103.1
Q ss_pred chhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCC
Q 016003 8 DEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLS 87 (397)
Q Consensus 8 ~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~ 87 (397)
++|+|+|. ++++++++++|+.+|++.|.++++..+||+|. +++++|+|+..|++.++...
T Consensus 1 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~G~vt~~dl~~~~~~~----- 60 (122)
T 3kpb_A 1 TLVKDILS--KPPITAHSNISIMEAAKILIKHNINHLPIVDE-------------HGKLVGIITSWDIAKALAQN----- 60 (122)
T ss_dssp CBHHHHCC--SCCCCEETTSBHHHHHHHHHHHTCSCEEEECT-------------TSBEEEEECHHHHHHHHHTT-----
T ss_pred CchHHhhC--CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC-------------CCCEEEEEEHHHHHHHHHhc-----
Confidence 57899994 57899999999999999999999999999996 36899999999999988652
Q ss_pred hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeec
Q 016003 88 PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLT 166 (397)
Q Consensus 88 ~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IIT 166 (397)
..+++++|... ++++.+++++.++++.|. ++.++++|.+++ ++.+|+||
T Consensus 61 -----~~~v~~~~~~~----~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~---------------------g~~~Givt 110 (122)
T 3kpb_A 61 -----KKTIEEIMTRN----VITAHEDEPVDHVAIKMSKYNISGVPVVDDY---------------------RRVVGIVT 110 (122)
T ss_dssp -----CCBGGGTSBSS----CCCEETTSBHHHHHHHHHHHTCSEEEEECTT---------------------CBEEEEEE
T ss_pred -----ccCHHHHhcCC----CeEECCCCCHHHHHHHHHHhCCCeEEEECCC---------------------CCEEEEEe
Confidence 23799999754 889999999999999999 799999998632 46789999
Q ss_pred HHHHHHHHHh
Q 016003 167 QEDIIRFILS 176 (397)
Q Consensus 167 q~DIi~~l~~ 176 (397)
..||++++.+
T Consensus 111 ~~dl~~~l~~ 120 (122)
T 3kpb_A 111 SEDISRLFGG 120 (122)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhc
Confidence 9999999854
No 70
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.59 E-value=6.9e-15 Score=128.21 Aligned_cols=133 Identities=14% Similarity=0.137 Sum_probs=109.1
Q ss_pred cccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc
Q 016003 3 VSLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD 82 (397)
Q Consensus 3 ~~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~ 82 (397)
..|..++|+|+|. ++ +++++++|+.+|++.|.++++..+||+|.+ ++++|+|+..||+.++...
T Consensus 12 ~~l~~~~v~~im~--~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-------------~~~~Givt~~dl~~~~~~~ 75 (159)
T 3fv6_A 12 DKLKKLQVKDFQS--IP-VVIHENVSVYDAICTMFLEDVGTLFVVDRD-------------AVLVGVLSRKDLLRASIGQ 75 (159)
T ss_dssp HHHTTCBGGGSCB--CC-CEEETTSBHHHHHHHHHHHTCSEEEEECTT-------------SCEEEEEEHHHHHHHHTSC
T ss_pred HHHhhCCHHHHcC--CC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCC-------------CcEEEEEeHHHHHHHhhcc
Confidence 3567889999995 33 599999999999999999999999999963 6899999999999987543
Q ss_pred CCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCce
Q 016003 83 SNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGRE 161 (397)
Q Consensus 83 ~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (397)
. .....+|+++|... .+++++.++++|.+|++.|. +++++++|++++.. +.+.
T Consensus 76 ~------~~~~~~v~~~m~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~------------------~~~~ 129 (159)
T 3fv6_A 76 Q------ELTSVPVHIIMTRM--PNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDK------------------GFEV 129 (159)
T ss_dssp S------CTTTCBGGGTSEET--TSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSS------------------SEEE
T ss_pred C------cccCcCHHHHHcCC--CCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCc------------------ceeE
Confidence 2 22357899999751 23889999999999999999 79999999864210 0067
Q ss_pred eeeecHHHHHHHHHhc
Q 016003 162 FCWLTQEDIIRFILSS 177 (397)
Q Consensus 162 ~~IITq~DIi~~l~~~ 177 (397)
+|+||+.||++++.+-
T Consensus 130 vGiit~~dil~~l~~~ 145 (159)
T 3fv6_A 130 IGRVTKTNMTKILVSL 145 (159)
T ss_dssp EEEEEHHHHHHHHHHH
T ss_pred EEEEEHHHHHHHHHHH
Confidence 8999999999999874
No 71
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.59 E-value=6.7e-15 Score=124.39 Aligned_cols=129 Identities=22% Similarity=0.274 Sum_probs=106.5
Q ss_pred CccccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHH-HHHH
Q 016003 1 MAVSLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDV-ICYL 79 (397)
Q Consensus 1 ~~~~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Di-l~~l 79 (397)
|-.+|.+.+|+++|. ++++++++++|+.+|++.|.++++..+||+|. +++++|+|+..|+ +.++
T Consensus 1 ~~~~l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~Givt~~dl~~~~~ 65 (138)
T 2p9m_A 1 MIDTLKNIKVKDVMT--KNVITAKRHEGVVEAFEKMLKYKISSLPVIDD-------------ENKVIGIVTTTDIGYNLI 65 (138)
T ss_dssp ----CTTCBGGGTSB--CSCCCEETTSBHHHHHHHHHHHTCCEEEEECT-------------TCBEEEEEEHHHHHHHHT
T ss_pred CccccccCCHHHhhc--CCceEECCCCcHHHHHHHHHHCCCcEEEEECC-------------CCeEEEEEEHHHHHHHHH
Confidence 345678999999994 57899999999999999999999999999996 3689999999999 8877
Q ss_pred hhcCCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cC-----CceEEEeccCcchhhhhhhccccccc
Q 016003 80 CKDSNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GG-----AQNLVVPIKNRLSIKRKQQQKLSSSS 153 (397)
Q Consensus 80 ~~~~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g-----~~r~~V~~~~~~~~~~~~~~~~~~~~ 153 (397)
.+. ...+.+++++|... ++++.+++++.++++.|. ++ +++++|.+++
T Consensus 66 ~~~-------~~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~---------------- 118 (138)
T 2p9m_A 66 RDK-------YTLETTIGDVMTKD----VITIHEDASILEAIKKMDISGKKEEIINQLPVVDKN---------------- 118 (138)
T ss_dssp TTC-------CCSSCBHHHHSCSS----CCCEETTSBHHHHHHHHTCC-----CCCEEEEECTT----------------
T ss_pred hhc-------ccCCcCHHHHhCCC----cEEECCCCCHHHHHHHHHhcCCccccccEEEEECCC----------------
Confidence 642 12357899999754 889999999999999999 68 8899887532
Q ss_pred ccCCCCceeeeecHHHHHHHHHh
Q 016003 154 LTNHNGREFCWLTQEDIIRFILS 176 (397)
Q Consensus 154 ~~~~~~~~~~IITq~DIi~~l~~ 176 (397)
++.+|+||..|+++++.+
T Consensus 119 -----g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 119 -----NKLVGIISDGDIIRTISK 136 (138)
T ss_dssp -----SBEEEEEEHHHHHHHHHH
T ss_pred -----CeEEEEEEHHHHHHHHHh
Confidence 467899999999999865
No 72
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=4.3e-15 Score=130.29 Aligned_cols=130 Identities=19% Similarity=0.233 Sum_probs=110.8
Q ss_pred ccccchhhhhhcCC-CCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc
Q 016003 4 SLLADEVSDLCLGK-PALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD 82 (397)
Q Consensus 4 ~~~~~~v~dl~~~k-~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~ 82 (397)
-|..++|+|+|..+ .+++++++++|+.+|++.|.++++..+||+|. +++++|+|+..||+.++...
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~-------------~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA-------------DGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-------------TSCEEEEEEHHHHHHHHHHH
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-------------CCeEEEEEEHHHHHHHHHhc
Confidence 35678999999653 46899999999999999999999999999996 36899999999999988752
Q ss_pred CCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCce
Q 016003 83 SNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGRE 161 (397)
Q Consensus 83 ~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (397)
. ......+|+++|... ++++.++++|.+|++.|. +++++++|+++ ++.
T Consensus 87 ~-----~~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~----------------------g~~ 135 (165)
T 3fhm_A 87 G-----AASLQQSVSVAMTKN----VVRCQHNSTTDQLMEIMTGGRFRHVPVEEN----------------------GRL 135 (165)
T ss_dssp G-----GGGGTSBGGGTSBSS----CCCBCTTCBHHHHHHHHHHHTCSEEEEEET----------------------TEE
T ss_pred C-----CccccCCHHHHhcCC----CeEECCCCcHHHHHHHHHHcCCCEEEEEEC----------------------CEE
Confidence 1 124467899999754 889999999999999999 79999999863 357
Q ss_pred eeeecHHHHHHHHHhc
Q 016003 162 FCWLTQEDIIRFILSS 177 (397)
Q Consensus 162 ~~IITq~DIi~~l~~~ 177 (397)
+|+||..||++++.+.
T Consensus 136 ~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 136 AGIISIGDVVKARIGE 151 (165)
T ss_dssp EEEEEHHHHHHHTTCC
T ss_pred EEEEEHHHHHHHHHHH
Confidence 8999999999998643
No 73
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.58 E-value=2.4e-15 Score=127.84 Aligned_cols=125 Identities=17% Similarity=0.129 Sum_probs=104.4
Q ss_pred cchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCC
Q 016003 7 ADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSL 86 (397)
Q Consensus 7 ~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~ 86 (397)
+.+|+|+|...++++++++++|+.+|++.|.+++++++||++.+ .++++|+|+..||+.++...
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~------------~~~~vGivt~~dl~~~~~~~---- 65 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGES------------HDDVLGVLLAKDLLPLILKA---- 65 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS------------TTCEEEEEEGGGGGGGGGSS----
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC------------CCcEEEEEEHHHHHHHHHhc----
Confidence 46899999755679999999999999999999999999999963 25899999999999887631
Q ss_pred ChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeee
Q 016003 87 SPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWL 165 (397)
Q Consensus 87 ~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~II 165 (397)
.....+++++|. +++++.+++++.+|++.|. +++++++|++++ |+.+|||
T Consensus 66 ---~~~~~~v~~~m~-----~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~---------------------g~lvGii 116 (136)
T 3lfr_A 66 ---DGDSDDVKKLLR-----PATFVPESKRLNVLLREFRANHNHMAIVIDEY---------------------GGVAGLV 116 (136)
T ss_dssp ---SGGGCCGGGTCB-----CCCEEETTCBHHHHHHHHHHHTCCEEEEECTT---------------------SCEEEEE
T ss_pred ---cCCCcCHHHHcC-----CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCC---------------------CCEEEEE
Confidence 123578999993 2789999999999999999 799999988532 4688999
Q ss_pred cHHHHHHHHHh
Q 016003 166 TQEDIIRFILS 176 (397)
Q Consensus 166 Tq~DIi~~l~~ 176 (397)
|..||++.+..
T Consensus 117 t~~Dil~~l~~ 127 (136)
T 3lfr_A 117 TIEDVLEQIVG 127 (136)
T ss_dssp EHHHHHTTC--
T ss_pred EHHHHHHHHhC
Confidence 99999988753
No 74
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.58 E-value=8.3e-15 Score=139.93 Aligned_cols=121 Identities=21% Similarity=0.243 Sum_probs=98.2
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhc-----CCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRS-----LFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAG 260 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~-----~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~ 260 (397)
..++++ +|+++++++.+++++.+|++.|.++ ++ +.+||||++|+++|+| +.+
T Consensus 134 ~~~v~~--iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~--~~~~Vvd~~~~lvGiv-------------------t~~ 190 (278)
T 2yvy_A 134 EDEAGG--LMTPEYVAVREGMTVEEVLRFLRRAAPDAETI--YYIYVVDEKGRLKGVL-------------------SLR 190 (278)
T ss_dssp TTBGGG--TCBSCCCEECTTSBHHHHHHHHHHHTTTCSCS--SEEEEECTTCBEEEEE-------------------EHH
T ss_pred cchHHh--hcCCCceEECCCCcHHHHHHHHHHccCCccce--eEEEEECCCCCEEEEE-------------------EHH
Confidence 445555 8999999999999999999999987 67 9999999999999994 456
Q ss_pred hhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcC
Q 016003 261 DLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRR 340 (397)
Q Consensus 261 Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (397)
|++.... ... ...+|.
T Consensus 191 dll~~~~--------------------------------------------------------~~~--------v~~im~ 206 (278)
T 2yvy_A 191 DLIVADP--------------------------------------------------------RTR--------VAEIMN 206 (278)
T ss_dssp HHHHSCT--------------------------------------------------------TCB--------STTTSB
T ss_pred HHhcCCC--------------------------------------------------------CCc--------HHHHhC
Confidence 6553100 000 012467
Q ss_pred CccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 341 AEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 341 ~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
+++++|++++++.+++.+|.+++++++||||++|+++||||..||++++.+..
T Consensus 207 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~ 259 (278)
T 2yvy_A 207 PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 259 (278)
T ss_dssp SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC----
T ss_pred CCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999987653
No 75
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.57 E-value=1.5e-14 Score=122.30 Aligned_cols=127 Identities=14% Similarity=0.147 Sum_probs=106.3
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
.|...+|+|+|. ++++++++++|+.+|++.|.++++.++||+|. +++++|+|+..|+++.+....
T Consensus 3 ~l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~Givt~~dl~~~~~~~~ 67 (138)
T 2yzi_A 3 MDMKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVIND-------------DGNVVGFFTKSDIIRRVIVPG 67 (138)
T ss_dssp CCTTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-------------TSCEEEEEEHHHHHHHTTTTC
T ss_pred chhhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-------------CCcEEEEEeHHHHHHHHHhcC
Confidence 466789999995 57899999999999999999999999999996 368999999999985443211
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
.....+++++|... ++++.+++++.+|++.|. ++++++ |++++ |+.+
T Consensus 68 ------~~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~---------------------g~~~ 115 (138)
T 2yzi_A 68 ------LPYDIPVERIMTRN----LITANVNTPLGEVLRKMAEHRIKHI-LIEEE---------------------GKIV 115 (138)
T ss_dssp ------CCTTSBGGGTCBCS----CCEEETTSBHHHHHHHHHHHTCSEE-EEEET---------------------TEEE
T ss_pred ------CcccCCHHHHhhCC----CeEECCCCcHHHHHHHHHhcCCCEE-EECCC---------------------CCEE
Confidence 12357899999754 899999999999999999 799999 87532 4678
Q ss_pred eeecHHHHHHHHHhc
Q 016003 163 CWLTQEDIIRFILSS 177 (397)
Q Consensus 163 ~IITq~DIi~~l~~~ 177 (397)
|+||+.||++++.+.
T Consensus 116 Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 116 GIFTLSDLLEASRRR 130 (138)
T ss_dssp EEEEHHHHHHHHHCC
T ss_pred EEEEHHHHHHHHHHH
Confidence 999999999998754
No 76
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.57 E-value=1.8e-14 Score=119.47 Aligned_cols=121 Identities=18% Similarity=0.241 Sum_probs=103.2
Q ss_pred chhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCC
Q 016003 8 DEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLS 87 (397)
Q Consensus 8 ~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~ 87 (397)
++|+|+|. ++++++++++|+.+|++.|.++++..+||+| + ++++|+++..|++.++.++..
T Consensus 1 m~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-------------~~~~G~it~~dl~~~~~~~~~--- 61 (125)
T 1pbj_A 1 MRVEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVK-E-------------GVRVGIVTTWDVLEAIAEGDD--- 61 (125)
T ss_dssp -CHHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T-------------TEEEEEEEHHHHHHHHHHTCC---
T ss_pred CCHHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEe-C-------------CeeEEEEeHHHHHHHHhcCCc---
Confidence 47899994 5789999999999999999999999999999 4 589999999999988775321
Q ss_pred hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeec
Q 016003 88 PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLT 166 (397)
Q Consensus 88 ~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IIT 166 (397)
....+++++|... ++++.+++++.++++.|. +++++++|.++ ++.+|+||
T Consensus 62 ---~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~----------------------~~~~Gvit 112 (125)
T 1pbj_A 62 ---LAEVKVWEVMERD----LVTISPRATIKEAAEKMVKNVVWRLLVEED----------------------DEIIGVIS 112 (125)
T ss_dssp ---TTTSBHHHHCBCG----GGEECTTSCHHHHHHHHHHHTCSEEEEEET----------------------TEEEEEEE
T ss_pred ---ccccCHHHHcCCC----CeEECCCCCHHHHHHHHHhcCCcEEEEEEC----------------------CEEEEEEE
Confidence 2357899999754 899999999999999999 79999998753 35789999
Q ss_pred HHHHHHHHHh
Q 016003 167 QEDIIRFILS 176 (397)
Q Consensus 167 q~DIi~~l~~ 176 (397)
..|+++++.+
T Consensus 113 ~~dl~~~l~~ 122 (125)
T 1pbj_A 113 ATDILRAKMA 122 (125)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 9999999853
No 77
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.57 E-value=1.5e-14 Score=122.14 Aligned_cols=129 Identities=16% Similarity=0.111 Sum_probs=104.9
Q ss_pred ccccc-hhhhhhcCC-CCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhh
Q 016003 4 SLLAD-EVSDLCLGK-PALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCK 81 (397)
Q Consensus 4 ~~~~~-~v~dl~~~k-~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~ 81 (397)
|...+ +|+|+|..+ ++++++++++|+.+|++.|.++++.++||+| + ++++|+|+..|++.++..
T Consensus 1 ~~~~m~~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-------------~~~~Givt~~dl~~~~~~ 66 (135)
T 2rc3_A 1 FQGHMKTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D-------------EKLVGILTERDFSRKSYL 66 (135)
T ss_dssp ----CCBHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T-------------TEEEEEEEHHHHHHHGGG
T ss_pred CCccceeHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-------------CEEEEEEehHHHHHHHHH
Confidence 34456 899999522 5789999999999999999999999999998 3 589999999999976554
Q ss_pred cCCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCc
Q 016003 82 DSNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGR 160 (397)
Q Consensus 82 ~~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (397)
... ...+.+++++|... ++++.+++++.+|++.|. +++++++|++ + ++
T Consensus 67 ~~~-----~~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~---------------------g~ 115 (135)
T 2rc3_A 67 LDK-----PVKDTQVKEIMTRQ----VAYVDLNNTNEDCMALITEMRVRHLPVLD-D---------------------GK 115 (135)
T ss_dssp SSS-----CGGGSBGGGTSBCS----CCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T---------------------TE
T ss_pred cCC-----CcccCCHHHhccCC----CeEECCCCcHHHHHHHHHHhCCCEEEEEe-C---------------------CE
Confidence 211 23467899999755 899999999999999999 7999999885 2 35
Q ss_pred eeeeecHHHHHHHHHhc
Q 016003 161 EFCWLTQEDIIRFILSS 177 (397)
Q Consensus 161 ~~~IITq~DIi~~l~~~ 177 (397)
.+|+||..||++++.+.
T Consensus 116 ~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 116 VIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp EEEEEEHHHHHHHHHC-
T ss_pred EEEEEEHHHHHHHHHhc
Confidence 78999999999998753
No 78
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.56 E-value=3.6e-14 Score=120.75 Aligned_cols=122 Identities=17% Similarity=0.126 Sum_probs=103.8
Q ss_pred cchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCC--eEEEEEehhHHHHHHhhcCC
Q 016003 7 ADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACEC--QCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 7 ~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~--~~vGiv~~~Dil~~l~~~~~ 84 (397)
+.+|+|+|. ++++++++++|+.+|++.|.++++.++||+|. ++ +++|+|+..|++.++.+..
T Consensus 4 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~~~Givt~~dl~~~~~~~~- 67 (141)
T 2rih_A 4 AIRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTAR-------------DNPKRPVAVVSERDILRAVAQRL- 67 (141)
T ss_dssp -CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEET-------------TEEEEEEEEEEHHHHHHHHHTTC-
T ss_pred ceEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-------------CCcceeEEEEEHHHHHHHHhcCC-
Confidence 468999994 67899999999999999999999999999996 35 8999999999999886532
Q ss_pred CCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceee
Q 016003 85 SLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFC 163 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
..+.+++++|... ++++.++ ++.+|++.|. +++++++|++++ ++.+|
T Consensus 68 ------~~~~~v~~~m~~~----~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~---------------------g~~~G 115 (141)
T 2rih_A 68 ------DLDGPAMPIANSP----ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKN---------------------GELVG 115 (141)
T ss_dssp ------CTTSBSGGGCBCC----CEEETTS-BHHHHHHHHHHHTCSEEEEECTT---------------------SCEEE
T ss_pred ------CCCCCHHHHcCCC----CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCC---------------------CcEEE
Confidence 1257899999754 8999999 9999999999 799999988632 46789
Q ss_pred eecHHHHHHHHHh
Q 016003 164 WLTQEDIIRFILS 176 (397)
Q Consensus 164 IITq~DIi~~l~~ 176 (397)
+||..||++.+..
T Consensus 116 iit~~dll~~~~~ 128 (141)
T 2rih_A 116 VLSIRDLCFERAI 128 (141)
T ss_dssp EEEHHHHHSCHHH
T ss_pred EEEHHHHHHHHHH
Confidence 9999999876654
No 79
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.56 E-value=5e-15 Score=126.78 Aligned_cols=133 Identities=21% Similarity=0.204 Sum_probs=105.3
Q ss_pred cchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCC
Q 016003 7 ADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSL 86 (397)
Q Consensus 7 ~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~ 86 (397)
..+|+|+|....+++++++++|+.+|++.|.++++..+||+|. +++++|+|+..||+.++..+....
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~G~vt~~dl~~~~~~~~~~~ 70 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE-------------DWKLVGLVSDYDLLALDSGDSTWK 70 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT-------------TCBEEEEEEHHHHTTCC----CCH
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC-------------CCeEEEEEEHHHHHHhhcccCccc
Confidence 5789999976557999999999999999999999999999996 368999999999987644211100
Q ss_pred -------ChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCC
Q 016003 87 -------SPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHN 158 (397)
Q Consensus 87 -------~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (397)
........+++++|... ++++.++++|.+|++.|. +++++++|++++
T Consensus 71 ~~~~~~~~~~~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~--------------------- 125 (152)
T 4gqw_A 71 TFNAVQKLLSKTNGKLVGDLMTPA----PLVVEEKTNLEDAAKILLETKYRRLPVVDSD--------------------- 125 (152)
T ss_dssp HHHHHHTC-----CCBHHHHSEES----CCCEESSSBHHHHHHHHHHSSCCEEEEECTT---------------------
T ss_pred chHHHHHHHHHhccccHHHhcCCC----ceEECCCCcHHHHHHHHHHCCCCEEEEECCC---------------------
Confidence 00123457899999754 788999999999999999 799999998632
Q ss_pred CceeeeecHHHHHHHHHhc
Q 016003 159 GREFCWLTQEDIIRFILSS 177 (397)
Q Consensus 159 ~~~~~IITq~DIi~~l~~~ 177 (397)
++.+|+||+.||++++.+.
T Consensus 126 g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 126 GKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp SBEEEEEEHHHHHHHHHC-
T ss_pred CcEEEEEEHHHHHHHHHhc
Confidence 4678999999999999754
No 80
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.56 E-value=1.2e-14 Score=133.48 Aligned_cols=160 Identities=15% Similarity=0.089 Sum_probs=101.4
Q ss_pred chhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCC
Q 016003 8 DEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLS 87 (397)
Q Consensus 8 ~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~ 87 (397)
.+++++|. ++++++++++|+.+|+++|.++++.++||+|. +++++|+|+..|+..++.
T Consensus 13 ~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-------------~~~l~Givt~~dl~~~~~------- 70 (213)
T 1vr9_A 13 MKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDR-------------EGHFRGVVNKEDLLDLDL------- 70 (213)
T ss_dssp CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECT-------------TSBEEEEEEGGGGTTSCT-------
T ss_pred cCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcC-------------CCEEEEEEEHHHHHhhcC-------
Confidence 45788884 67899999999999999999999999999995 368999999999986532
Q ss_pred hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeec
Q 016003 88 PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLT 166 (397)
Q Consensus 88 ~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IIT 166 (397)
+.+|+++|... ++++.+++++.+|++.|. +++++++|++++ ++.+|+||
T Consensus 71 -----~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---------------------g~lvGiit 120 (213)
T 1vr9_A 71 -----DSSVFNKVSLP----DFFVHEEDNITHALLLFLEHQEPYLPVVDEE---------------------MRLKGAVS 120 (213)
T ss_dssp -----TSBSGGGCBCT----TCCEETTSBHHHHHHHHHHCCCSEEEEECTT---------------------CBEEEEEE
T ss_pred -----CCcHHHHccCC----CEEECCCCcHHHHHHHHHHhCCCEEEEEcCC---------------------CEEEEEEE
Confidence 35799999754 889999999999999999 799999998632 46789999
Q ss_pred HHHHHHHHHhccCCCCCCccCCccccCCCCcC-eEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCC
Q 016003 167 QEDIIRFILSSISLFSPIPALSIDSLGIISTD-VVAVDYHSPASLALEAISRSLFDQTSVAVVDSDG 232 (397)
Q Consensus 167 q~DIi~~l~~~~~~l~~l~~~ti~~L~~~~~~-v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g 232 (397)
..|+++.+...... . + .+++- +.+.....++.+|++.|.++++ ..++|++.+|
T Consensus 121 ~~Dil~~~~~~~~~-~--------~--~~~~l~~~~~~~~~~l~~~~~~l~~~~~--~~l~V~~~~~ 174 (213)
T 1vr9_A 121 LHDFLEALIEALAM-D--------V--PGIRFSVLLEDKPGELRKVVDALALSNI--NILSVITTRS 174 (213)
T ss_dssp HHHHHHHHHHSCC------------------------------------------------------
T ss_pred HHHHHHHHHHHhcC-C--------C--CcEEEEEEeCCCCccHHHHHHHHHHCCC--cEEEEEEEec
Confidence 99999988643211 0 0 11111 1122344459999999999999 9999987655
No 81
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.56 E-value=1.5e-14 Score=125.78 Aligned_cols=134 Identities=11% Similarity=0.111 Sum_probs=108.5
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
.|...+|+|+|..+.+++++++++|+.+|++.|.++++.++||+|.+ ++++|+|+..||+.++....
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-------------~~lvGivt~~dl~~~~~~~~ 76 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS-------------YRLHGLIGTNMIMNSIFGLE 76 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT-------------CBEEEEEEHHHHHHHHBCSS
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC-------------CCEEEEeEHHHHHHHhhhhc
Confidence 35678999999643378999999999999999999999999999963 68999999999999886532
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
.. +.......+|+++|... ++++.+++++.+|++.|. +++ ++|+++ +++.+
T Consensus 77 ~~-~~~~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~--lpVvd~---------------------~g~~v 128 (159)
T 1yav_A 77 RI-EFEKLDQITVEEVMLTD----IPRLHINDPIMKGFGMVINNGF--VCVEND---------------------EQVFE 128 (159)
T ss_dssp SB-CGGGTTTSBHHHHSBCS----CCEEETTSBHHHHHHHTTTCSE--EEEECT---------------------TCBEE
T ss_pred cc-chhhhccCCHHHhcCCC----CceEcCCCCHHHHHHHHHhCCE--EEEEeC---------------------CCeEE
Confidence 21 12234567899999754 899999999999999998 454 777652 24678
Q ss_pred eeecHHHHHHHHHhcc
Q 016003 163 CWLTQEDIIRFILSSI 178 (397)
Q Consensus 163 ~IITq~DIi~~l~~~~ 178 (397)
|+||+.||++++.+..
T Consensus 129 Giit~~dil~~~~~~~ 144 (159)
T 1yav_A 129 GIFTRRVVLKELNKHI 144 (159)
T ss_dssp EEEEHHHHHHHHHHHC
T ss_pred EEEEHHHHHHHHHHHH
Confidence 9999999999998653
No 82
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.56 E-value=2e-14 Score=124.26 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=108.1
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
.|...+|+|+|..+.+++++++++|+.+|++.|.++++.++||+|.+ ++++|+|+..|++.++....
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-------------~~~~Givt~~dl~~~~~~~~ 73 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS-------------YKLHGLISMTMMMDAILGLE 73 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT-------------CCEEEEEEHHHHHHHSBCSS
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC-------------CCEEEEeeHHHHHHHHhccc
Confidence 45678999999643478999999999999999999999999999963 68999999999999876422
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
.. +.......+++++|... ++++.++++|.+|++.|. +++ ++|+++ +++.+
T Consensus 74 ~~-~~~~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~---------------------~g~~~ 125 (157)
T 2emq_A 74 RI-EFERLETMKVEEVMNRN----IPRLRLDDSLMKAVGLIVNHPF--VCVEND---------------------DGYFA 125 (157)
T ss_dssp SB-CGGGGGTCBGGGTCBCC----CCEEETTSBHHHHHHHHHHSSE--EEEECS---------------------SSSEE
T ss_pred cc-chHHhcCCcHHHHhCCC----CceecCCCcHHHHHHHHhhCCE--EEEEcC---------------------CCeEE
Confidence 11 11233567899999754 899999999999999999 555 777642 24688
Q ss_pred eeecHHHHHHHHHhccCC
Q 016003 163 CWLTQEDIIRFILSSISL 180 (397)
Q Consensus 163 ~IITq~DIi~~l~~~~~~ 180 (397)
|+||..||++++.+....
T Consensus 126 Giit~~dil~~~~~~~~~ 143 (157)
T 2emq_A 126 GIFTRREVLKQLNKQLHR 143 (157)
T ss_dssp EEEEHHHHHHHHHHTTCC
T ss_pred EEEEHHHHHHHHHHHhhc
Confidence 999999999999875443
No 83
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.55 E-value=1.8e-14 Score=128.20 Aligned_cols=124 Identities=19% Similarity=0.168 Sum_probs=105.0
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
|...+|+|+|...++++++++++|+.+|++.|.+++++++||++.+ .++++|+|+..||+.++..+.
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~------------~~~lvGivt~~Dl~~~~~~~~- 99 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGS------------LDEVVGIGRAKDLVADLITEG- 99 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSS------------TTSEEEEEEHHHHHHHHHHHS-
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCC------------CCCEEEEEEHHHHHHHHhcCC-
Confidence 5678899999765679999999999999999999999999999853 268999999999999876531
Q ss_pred CCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceee
Q 016003 85 SLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFC 163 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
+.+++ +| .. ++++.+++++.+|++.|. +++++++|++++ |+.+|
T Consensus 100 --------~~~v~-~~-~~----~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~---------------------g~lvG 144 (173)
T 3ocm_A 100 --------RVRRN-RL-RD----PIIVHESIGILRLMDTLKRSRGQLVLVADEF---------------------GAIEG 144 (173)
T ss_dssp --------SCCGG-GS-BC----CCEECGGGCHHHHHHHHHHSTTCCEEEECTT---------------------CCEEE
T ss_pred --------cchhH-hc-CC----CeEECCCCcHHHHHHHHHHcCCeEEEEEeCC---------------------CCEEE
Confidence 35677 44 33 789999999999999999 789999887532 56889
Q ss_pred eecHHHHHHHHHh
Q 016003 164 WLTQEDIIRFILS 176 (397)
Q Consensus 164 IITq~DIi~~l~~ 176 (397)
|||..||++.+..
T Consensus 145 iIT~~Dil~~l~~ 157 (173)
T 3ocm_A 145 LVTPIDVFEAIAG 157 (173)
T ss_dssp EECHHHHHHHHHC
T ss_pred EEeHHHHHHHHhC
Confidence 9999999999974
No 84
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.55 E-value=3.2e-14 Score=123.27 Aligned_cols=125 Identities=19% Similarity=0.197 Sum_probs=106.9
Q ss_pred chhhhhhcCC----CCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 8 DEVSDLCLGK----PALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 8 ~~v~dl~~~k----~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
++|+|+|..+ ++++++++++|+.+|++.|.++++..+||.+ +++++|+|+..||+.++....
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~--------------~~~~~Givt~~dl~~~~~~~~ 72 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD--------------GDDIAGIVTERDYARKVVLQE 72 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES--------------SSSEEEEEEHHHHHHHSGGGT
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee--------------CCEEEEEEEHHHHHHHHHhcc
Confidence 5799999765 6789999999999999999999999999955 268999999999999887532
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
. .....+++++|... ++++.+++++.+|++.|. +++++++|.+ + ++.+
T Consensus 73 ~-----~~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~---------------------g~~~ 121 (157)
T 4fry_A 73 R-----SSKATRVEEIMTAK----VRYVEPSQSTDECMALMTEHRMRHLPVLD-G---------------------GKLI 121 (157)
T ss_dssp C-----CSSSCBHHHHSBSS----CCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T---------------------TEEE
T ss_pred C-----CccccCHHHHcCCC----CcEECCCCcHHHHHHHHHHcCCCEEEEEE-C---------------------CEEE
Confidence 1 12467899999754 889999999999999999 7999999985 2 3578
Q ss_pred eeecHHHHHHHHHhc
Q 016003 163 CWLTQEDIIRFILSS 177 (397)
Q Consensus 163 ~IITq~DIi~~l~~~ 177 (397)
|+||+.||++++.+.
T Consensus 122 Giit~~dil~~l~~~ 136 (157)
T 4fry_A 122 GLISIGDLVKSVIAD 136 (157)
T ss_dssp EEEEHHHHHHHHHTT
T ss_pred EEEEHHHHHHHHHHH
Confidence 999999999999864
No 85
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.54 E-value=3.8e-14 Score=123.73 Aligned_cols=131 Identities=21% Similarity=0.199 Sum_probs=106.6
Q ss_pred ccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC-
Q 016003 6 LADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN- 84 (397)
Q Consensus 6 ~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~- 84 (397)
...+|+|+|. ++++++++++|+.+|++.|.++++.++||+|. +++++|+|+..||+.++.....
T Consensus 3 ~~~~v~dim~--~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-------------~~~lvGivt~~dl~~~~~~~~~~ 67 (160)
T 2o16_A 3 LMIKVEDMMT--RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-------------NKKLLGIVSQRDLLAAQESSLQR 67 (160)
T ss_dssp CCCBGGGTSE--ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-------------TCBEEEEEEHHHHHHHHHHHCC-
T ss_pred CcCcHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-------------CCcEEEEEeHHHHHHHHHHhhcc
Confidence 4578999995 57899999999999999999999999999996 3689999999999998764210
Q ss_pred C-CChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 85 S-LSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 85 l-~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
. .........+++++|... ++++.++++|.+|++.|. +++++++|+++ ++.+
T Consensus 68 ~~~~~~~~~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~----------------------g~lv 121 (160)
T 2o16_A 68 SAQGDSLAFETPLFEVMHTD----VTSVAPQAGLKESAIYMQKHKIGCLPVVAK----------------------DVLV 121 (160)
T ss_dssp --------CCCBHHHHSCSC----EEEBCTTSBHHHHHHHHHHTTCSCEEEEET----------------------TEEE
T ss_pred cccccchhcccCHHHHhcCC----CeEECCCCCHHHHHHHHHHhCCCEEEEEEC----------------------CEEE
Confidence 0 001123467899999754 899999999999999999 78999998853 3578
Q ss_pred eeecHHHHHHHHHhc
Q 016003 163 CWLTQEDIIRFILSS 177 (397)
Q Consensus 163 ~IITq~DIi~~l~~~ 177 (397)
|+||..||++++.+.
T Consensus 122 Giit~~dil~~~~~~ 136 (160)
T 2o16_A 122 GIITDSDFVTIAINL 136 (160)
T ss_dssp EEECHHHHHHHHHHH
T ss_pred EEEEHHHHHHHHHHH
Confidence 999999999998763
No 86
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.54 E-value=1.6e-14 Score=121.05 Aligned_cols=123 Identities=16% Similarity=0.147 Sum_probs=104.5
Q ss_pred ccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCC
Q 016003 6 LADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNS 85 (397)
Q Consensus 6 ~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l 85 (397)
.+.+|+++|. +++.++++++|+.+|++.|.++++..+||+|. ++++|+|+..|++..+.+..
T Consensus 3 ~s~~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--------------~~~~Givt~~dl~~~~~~~~-- 64 (128)
T 3gby_A 3 ASVTFSYLAE--TDYPVFTLGGSTADAARRLAASGCACAPVLDG--------------ERYLGMVHLSRLLEGRKGWP-- 64 (128)
T ss_dssp TTCBGGGGCB--CCSCCEETTSBHHHHHHHHHHHTCSEEEEEET--------------TEEEEEEEHHHHHTTCSSSC--
T ss_pred cceEHHHhhc--CCcceECCCCCHHHHHHHHHHCCCcEEEEEEC--------------CEEEEEEEHHHHHHHHhhCC--
Confidence 3678999994 56889999999999999999999999999995 48999999999998765421
Q ss_pred CChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeee
Q 016003 86 LSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCW 164 (397)
Q Consensus 86 ~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 164 (397)
....+++++|... ++++.+++++.++++.|. ++.++++|++++ |+.+|+
T Consensus 65 -----~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~---------------------g~~~Gi 114 (128)
T 3gby_A 65 -----TVKEKLGEELLET----VRSYRPGEQLFDNLISVAAAKCSVVPLADED---------------------GRYEGV 114 (128)
T ss_dssp -----CTTCBCCGGGCBC----CCCBCTTSBGGGSHHHHHHCSSSEEEEECTT---------------------CBEEEE
T ss_pred -----cccCcHHHHccCC----CcEECCCCCHHHHHHHHHhCCCcEEEEECCC---------------------CCEEEE
Confidence 1136799999755 889999999999999999 789999998632 468899
Q ss_pred ecHHHHHHHHHh
Q 016003 165 LTQEDIIRFILS 176 (397)
Q Consensus 165 ITq~DIi~~l~~ 176 (397)
||+.|+++++.+
T Consensus 115 it~~dll~~l~~ 126 (128)
T 3gby_A 115 VSRKRILGFLAE 126 (128)
T ss_dssp EEHHHHHHHHHT
T ss_pred EEHHHHHHHHHh
Confidence 999999999864
No 87
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.53 E-value=1.5e-14 Score=127.61 Aligned_cols=136 Identities=22% Similarity=0.193 Sum_probs=107.0
Q ss_pred cchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC---
Q 016003 7 ADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS--- 83 (397)
Q Consensus 7 ~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~--- 83 (397)
..+|+|+|..+.+++++++++|+.+|+++|.++++.++||+|. +++++|+|+..||+.++....
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-------------~~~~~Givt~~dl~~~~~~~~~~~ 69 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD-------------NWTLVGVVSDYDLLALDSISGRSQ 69 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-------------TCBEEEEEEHHHHTCC--------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC-------------CCeEEEEEEHHHHHhhhhhccccC
Confidence 3579999965447999999999999999999999999999996 368999999999985432100
Q ss_pred -----------CCCCh-------hhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhh
Q 016003 84 -----------NSLSP-------SLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRK 144 (397)
Q Consensus 84 -----------~l~~~-------~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~ 144 (397)
..... ....+.+|+++|... ++++.++++|.+|++.|. +++++++|++++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~------- 138 (180)
T 3sl7_A 70 NDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPS----PLVVRDSTNLEDAARLLLETKFRRLPVVDAD------- 138 (180)
T ss_dssp -----------CCCSHHHHHHHHHTTTTCBHHHHSEES----CCCEETTSBHHHHHHHHTTSTTCEEEEECTT-------
T ss_pred CcccccccccchhhhhHHHHHHHhccccccHHHHhCCC----ceEeCCCCcHHHHHHHHHHcCCCEEEEECCC-------
Confidence 00000 122357899999754 788999999999999999 799999998632
Q ss_pred hhcccccccccCCCCceeeeecHHHHHHHHHhccCC
Q 016003 145 QQQKLSSSSLTNHNGREFCWLTQEDIIRFILSSISL 180 (397)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~IITq~DIi~~l~~~~~~ 180 (397)
++.+|+||+.||++++.+....
T Consensus 139 --------------g~~vGiit~~dil~~~~~~~~~ 160 (180)
T 3sl7_A 139 --------------GKLIGILTRGNVVRAALQIKRN 160 (180)
T ss_dssp --------------CBEEEEEEHHHHHHHHHHHHHT
T ss_pred --------------CeEEEEEEHHHHHHHHHHHhhh
Confidence 4688999999999999875443
No 88
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.53 E-value=4.9e-14 Score=119.59 Aligned_cols=133 Identities=18% Similarity=0.173 Sum_probs=105.7
Q ss_pred ccccchhhh---hhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHh
Q 016003 4 SLLADEVSD---LCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLC 80 (397)
Q Consensus 4 ~~~~~~v~d---l~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~ 80 (397)
.+.+.++++ +| .++++++++++|+.+|++.|.++++.++||+|. +++++|+|+..|++.++.
T Consensus 4 ~~~~~~v~~~~~~~--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~Givt~~dl~~~~~ 68 (144)
T 2nyc_A 4 HFLKIPIGDLNIIT--QDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-------------NGYLINVYEAYDVLGLIK 68 (144)
T ss_dssp GGGGSBGGGSSCCB--CSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-------------TCBEEEEEEHHHHHHHHH
T ss_pred chhhcchhhcCCCC--CCCceEECCCCcHHHHHHHHHHcCcceeeEEcC-------------CCcEEEEEcHHHHHHHhc
Confidence 456778999 55 367899999999999999999999999999996 368999999999999876
Q ss_pred hcCCCCChhhhhcCChhhhccCCC--CCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCC
Q 016003 81 KDSNSLSPSLALKQPVSVLLPQLL--PPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNH 157 (397)
Q Consensus 81 ~~~~l~~~~~~~~~~V~~lm~~~~--~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~ 157 (397)
+.. ......+++++|.... ..+++++.++++|.+|++.|. ++.++++|.+++
T Consensus 69 ~~~-----~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~-------------------- 123 (144)
T 2nyc_A 69 GGI-----YNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDV-------------------- 123 (144)
T ss_dssp TC---------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTT--------------------
T ss_pred ccc-----cccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCC--------------------
Confidence 421 1123578999985410 014789999999999999999 799999998632
Q ss_pred CCceeeeecHHHHHHHHHhc
Q 016003 158 NGREFCWLTQEDIIRFILSS 177 (397)
Q Consensus 158 ~~~~~~IITq~DIi~~l~~~ 177 (397)
++.+|+||..||++++.+.
T Consensus 124 -g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 124 -GRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp -SBEEEEEEHHHHHHHHHHC
T ss_pred -CCEEEEEEHHHHHHHHHhc
Confidence 4678999999999998753
No 89
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.52 E-value=1.4e-14 Score=121.71 Aligned_cols=124 Identities=14% Similarity=0.167 Sum_probs=102.6
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHH-HHhhcC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVIC-YLCKDS 83 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~-~l~~~~ 83 (397)
+...+|+|+|. ++++++++++|+.+|++.|.++++.++||+|. +++++|+|+..|++. ++.++.
T Consensus 5 ~~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-------------~~~~~Givt~~dl~~~~~~~~~ 69 (133)
T 1y5h_A 5 FTMTTARDIMN--AGVTCVGEHETLTAAAQYMREHDIGALPICGD-------------DDRLHGMLTDRDIVIKGLAAGL 69 (133)
T ss_dssp ---CCHHHHSE--ETCCCEETTSBHHHHHHHHHHHTCSEEEEECG-------------GGBEEEEEEHHHHHHTTGGGTC
T ss_pred hhhcCHHHHhc--CCceEeCCCCCHHHHHHHHHHhCCCeEEEECC-------------CCeEEEEEeHHHHHHHHHhcCC
Confidence 45578999995 57889999999999999999999999999985 368999999999994 554422
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
. ....+++++|... ++++.+++++.+|++.|. ++.++++|.++ ++.+
T Consensus 70 ~------~~~~~v~~~m~~~----~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~----------------------g~~~ 117 (133)
T 1y5h_A 70 D------PNTATAGELARDS----IYYVDANASIQEMLNVMEEHQVRRVPVISE----------------------HRLV 117 (133)
T ss_dssp C------TTTSBHHHHHTTC----CCCEETTCCHHHHHHHHHHHTCSEEEEEET----------------------TEEE
T ss_pred C------ccccCHHHHhcCC----CEEECCCCCHHHHHHHHHHcCCCEEEEEEC----------------------CEEE
Confidence 1 2357899999654 889999999999999999 79999998853 3578
Q ss_pred eeecHHHHHHHHH
Q 016003 163 CWLTQEDIIRFIL 175 (397)
Q Consensus 163 ~IITq~DIi~~l~ 175 (397)
|+||..||++++.
T Consensus 118 Giit~~dil~~l~ 130 (133)
T 1y5h_A 118 GIVTEADIARHLP 130 (133)
T ss_dssp EEEEHHHHHHTCC
T ss_pred EEEEHHHHHHHHH
Confidence 9999999998864
No 90
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.52 E-value=3.5e-14 Score=122.64 Aligned_cols=128 Identities=16% Similarity=0.122 Sum_probs=103.0
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
|.+.+|+++ ++++++++++|+.+|++.|.++++.++||+|. +++++|+|+..||+.++.....
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-------------~~~~vGivt~~dl~~~~~~~~~ 82 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-------------KGRVVDIYSKFDVINLAAEKTY 82 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-------------TSBEEEEEEHHHHHHHHHCSSC
T ss_pred HHHccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECC-------------CCcEEEEEeHHHHHHHhcchhh
Confidence 345566666 57899999999999999999999999999996 3689999999999998765310
Q ss_pred CCChhhhhcCChhhhccCCC--CCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCce
Q 016003 85 SLSPSLALKQPVSVLLPQLL--PPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGRE 161 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~--~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (397)
...+.+++++|.... ..+++++.+++++.+|++.|. +++++++|++++ |+.
T Consensus 83 -----~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---------------------g~~ 136 (152)
T 2uv4_A 83 -----NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDEN---------------------DVV 136 (152)
T ss_dssp -----CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTT---------------------SBE
T ss_pred -----hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCC---------------------CeE
Confidence 123568999995210 023789999999999999999 799999998632 467
Q ss_pred eeeecHHHHHHHHH
Q 016003 162 FCWLTQEDIIRFIL 175 (397)
Q Consensus 162 ~~IITq~DIi~~l~ 175 (397)
+|+||+.||++++.
T Consensus 137 vGiit~~dil~~l~ 150 (152)
T 2uv4_A 137 KGIVSLSDILQALV 150 (152)
T ss_dssp EEEEEHHHHHHHHC
T ss_pred EEEEEHHHHHHHHH
Confidence 89999999999874
No 91
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.52 E-value=6.4e-14 Score=124.26 Aligned_cols=136 Identities=18% Similarity=0.144 Sum_probs=107.2
Q ss_pred cccccchhhhhhcCCCC--eEEE--eCChhHHHHHHHHhhCCCceEEEE--ccCCCCCCCCCCCCCCCeEEEEEehhHHH
Q 016003 3 VSLLADEVSDLCLGKPA--LRAL--SISAAIADALSALKNSDESFISVW--DCNCCSNHRKLGDACECQCVGKVCMVDVI 76 (397)
Q Consensus 3 ~~~~~~~v~dl~~~k~~--li~v--~~~~tv~~Al~~L~~~~I~s~PV~--d~~~~~~~~~~~~~~~~~~vGiv~~~Dil 76 (397)
.++...+|+|+|....+ ++++ ++++|+.+|+++|.++++.++||+ |. +++++|+|+..|++
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~-------------~~~lvGiit~~dl~ 72 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRE-------------SQRLVGFVLRRDLI 72 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTT-------------TCBEEEEEEHHHHH
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECC-------------CCeEEEEEEHHHHH
Confidence 36778899999965422 7778 999999999999999999999999 54 47899999999999
Q ss_pred HHHhhcC----CCCC--------------hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccC
Q 016003 77 CYLCKDS----NSLS--------------PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKN 137 (397)
Q Consensus 77 ~~l~~~~----~l~~--------------~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~ 137 (397)
.++.... .+.. .......+|+++|... ++++.++++|.+|++.|. +++++++|.+ +
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~ 147 (185)
T 2j9l_A 73 ISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLS----PFTVTDLTPMEIVVDIFRKLGLRQCLVTH-N 147 (185)
T ss_dssp HHHHHHHTSCSCCCTTCEEECSSSCCCCCTTCCCCEECGGGEESS----CCEEETTSBHHHHHHHHHHHTCSEEEEEE-T
T ss_pred HHHHhhcccCCCccccceeecccCCcccccccccCccHHHhhCcC----CeEeCCCCCHHHHHHHHHhCCCcEEEEEE-C
Confidence 9876420 0000 0012346799999654 899999999999999999 7999999875 2
Q ss_pred cchhhhhhhcccccccccCCCCceeeeecHHHHHHHHHhc
Q 016003 138 RLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFILSS 177 (397)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~l~~~ 177 (397)
|+.+|+||..||++++.+.
T Consensus 148 ---------------------g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 148 ---------------------GRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp ---------------------TEEEEEEEHHHHHHHHHHH
T ss_pred ---------------------CEEEEEEEHHHHHHHHHHh
Confidence 3578999999999999864
No 92
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.51 E-value=4.8e-14 Score=121.35 Aligned_cols=120 Identities=13% Similarity=0.187 Sum_probs=102.4
Q ss_pred chhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCC
Q 016003 8 DEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLS 87 (397)
Q Consensus 8 ~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~ 87 (397)
++|+|+|....+++++++++|+.+|++.|.++++..+||+|. +++++|+|+..||+.++.+..
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-------------~~~~~Givt~~dl~~~~~~~~---- 90 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD-------------DMNIIGIFTDGDLRRVFDTGV---- 90 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-------------TCBEEEEEEHHHHHHHHCSSS----
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-------------CCcEEEEecHHHHHHHHhcCC----
Confidence 589999953237899999999999999999999999999996 368999999999999886532
Q ss_pred hhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeec
Q 016003 88 PSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLT 166 (397)
Q Consensus 88 ~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IIT 166 (397)
...+.+++++|... ++++.++++|.+|++.|. +++++++|++++ +.+|+||
T Consensus 91 --~~~~~~v~~~m~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~----------------------~~~Giit 142 (149)
T 3k2v_A 91 --DMRDASIADVMTRG----GIRIRPGTLAVDALNLMQSRHITCVLVADGD----------------------HLLGVVH 142 (149)
T ss_dssp --CCTTCBHHHHSEES----CCEECTTCBHHHHHHHHHHHTCSEEEEEETT----------------------EEEEEEE
T ss_pred --CcccCcHHHHcCCC----CeEECCCCCHHHHHHHHHHcCCCEEEEecCC----------------------EEEEEEE
Confidence 12467899999755 789999999999999999 799999998632 5689999
Q ss_pred HHHHHH
Q 016003 167 QEDIIR 172 (397)
Q Consensus 167 q~DIi~ 172 (397)
..||++
T Consensus 143 ~~dil~ 148 (149)
T 3k2v_A 143 MHDLLR 148 (149)
T ss_dssp HHHHTC
T ss_pred HHHhhc
Confidence 999874
No 93
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.51 E-value=2.2e-14 Score=124.79 Aligned_cols=120 Identities=18% Similarity=0.167 Sum_probs=102.3
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
|...+|+|+|....+++++++++|+.+|++.|.++++.++||+|.+ .++++|+|+..|++.++..+
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~------------~~~lvGivt~~dl~~~~~~~-- 100 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGED------------KDEVLGILHAKDLLKYMFNP-- 100 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS------------TTCEEEEEEGGGGGGGSSCG--
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC------------CCcEEEEEEHHHHHHHHHcC--
Confidence 5678899999654579999999999999999999999999999963 24899999999999876431
Q ss_pred CCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceee
Q 016003 85 SLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFC 163 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
.+.+++++|. +++++.+++++.+|++.|. +++++++|++++ |+.+|
T Consensus 101 -------~~~~v~~im~-----~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~---------------------g~~~G 147 (156)
T 3oi8_A 101 -------EQFHLKSILR-----PAVFVPEGKSLTALLKEFREQRNHMAIVIDEY---------------------GGTSG 147 (156)
T ss_dssp -------GGCCHHHHCB-----CCCEEETTSBHHHHHHHHHHTTCCEEEEECTT---------------------SSEEE
T ss_pred -------CcccHHHHcC-----CCEEECCCCCHHHHHHHHHhcCCeEEEEECCC---------------------CCEEE
Confidence 3578999994 2689999999999999999 789999988632 46789
Q ss_pred eecHHHHH
Q 016003 164 WLTQEDII 171 (397)
Q Consensus 164 IITq~DIi 171 (397)
|||..||+
T Consensus 148 ivt~~Dil 155 (156)
T 3oi8_A 148 LVTFEDII 155 (156)
T ss_dssp EEEHHHHC
T ss_pred EEEHHHhc
Confidence 99999986
No 94
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.50 E-value=1.7e-13 Score=118.86 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=105.8
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCce-EEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc-
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESF-ISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD- 82 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s-~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~- 82 (397)
+...+|+|+| .++++++++++|+.+|++.|.++++.. +||+|. + +++|+|+..||+.++...
T Consensus 13 ~~~~~v~~im--~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~-------------~-~~vGivt~~dl~~~~~~~~ 76 (157)
T 1o50_A 13 MKVKDVCKLI--SLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD-------------N-KLVGMIPVMHLLKVSGFHF 76 (157)
T ss_dssp CBHHHHTTSS--CCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET-------------T-EEEEEEEHHHHHHHHHHHH
T ss_pred hccccHhhcc--cCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC-------------C-EEEEEEEHHHHHHHHhhhH
Confidence 4567899999 467999999999999999999999999 999995 3 899999999999876410
Q ss_pred -------CCCC-ChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhccccccc
Q 016003 83 -------SNSL-SPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSS 153 (397)
Q Consensus 83 -------~~l~-~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~ 153 (397)
.... ........+++++|. . ++++.++++|.+|++.|. +++++++|++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~v~~im~----~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---------------- 135 (157)
T 1o50_A 77 FGFIPKEELIRSSMKRLIAKNASEIML----D-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEK---------------- 135 (157)
T ss_dssp HCCCC-------CCCCCSSCBHHHHCB----C-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTT----------------
T ss_pred HhhhccHHHHHHHHHHHcCCcHHHHcC----C-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCC----------------
Confidence 0000 001234578999995 2 788999999999999999 799999998632
Q ss_pred ccCCCCceeeeecHHHHHHHHHhc
Q 016003 154 LTNHNGREFCWLTQEDIIRFILSS 177 (397)
Q Consensus 154 ~~~~~~~~~~IITq~DIi~~l~~~ 177 (397)
++.+|+||+.||++++.+.
T Consensus 136 -----g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 136 -----GEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp -----SCEEEEEEHHHHHHHHHHS
T ss_pred -----CEEEEEEEHHHHHHHHHHh
Confidence 4678999999999998754
No 95
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.49 E-value=2e-13 Score=118.48 Aligned_cols=137 Identities=15% Similarity=0.141 Sum_probs=107.1
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
+...+|+|+|. ++++++++++|+.+|++.|.++++.++||+|.+. +++++|+|+..||+.++.....
T Consensus 10 ~~~~~v~dim~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~-----------~~~~~Givt~~dl~~~~~~~~~ 76 (164)
T 2pfi_A 10 SHHVRVEHFMN--HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTE-----------SQILVGIVQRAQLVQALQAEPP 76 (164)
T ss_dssp CCSCBHHHHCB--CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTT-----------TCBEEEEEEHHHHHHHHHC---
T ss_pred ccCCCHHHHcC--CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCC-----------CCEEEEEEEHHHHHHHHHhhcc
Confidence 34678999994 5789999999999999999999999999999511 2689999999999998864211
Q ss_pred CCChhhhhcCChhhhccCCCC-Cc-eEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCce
Q 016003 85 SLSPSLALKQPVSVLLPQLLP-PL-VMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGRE 161 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~-~~-~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (397)
. .......++.++|..... .+ ++++.+++++.+|++.|. +++++++|.++ ++.
T Consensus 77 ~--~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~----------------------g~l 132 (164)
T 2pfi_A 77 S--RAPGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSR----------------------GRA 132 (164)
T ss_dssp ------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEET----------------------TEE
T ss_pred c--cCCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEEC----------------------CEE
Confidence 0 001234679999964311 12 678999999999999999 79999998862 357
Q ss_pred eeeecHHHHHHHHHhcc
Q 016003 162 FCWLTQEDIIRFILSSI 178 (397)
Q Consensus 162 ~~IITq~DIi~~l~~~~ 178 (397)
+|+||+.||++++.+..
T Consensus 133 ~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 133 VGCVSWVEMKKAISNLT 149 (164)
T ss_dssp EEEEEHHHHHHHHHHHH
T ss_pred EEEEEHHHHHHHHHhhh
Confidence 89999999999998643
No 96
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.49 E-value=1.9e-13 Score=140.35 Aligned_cols=121 Identities=21% Similarity=0.243 Sum_probs=100.5
Q ss_pred cCCccccCCCCcCeEEEeCCCcHHHHHHHHHhc-----CCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChh
Q 016003 186 ALSIDSLGIISTDVVAVDYHSPASLALEAISRS-----LFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAG 260 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~-----~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~ 260 (397)
..++++ +|+++++++.+++++.+|++.|.++ ++ +.+||+|++|+++|+| +.+
T Consensus 154 ~~~v~~--iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~--~~ipVvd~~~~lvGiV-------------------t~~ 210 (473)
T 2zy9_A 154 EDEAGG--LMTPEYVAVREGMTVEEVLRFLRRAAPDAETI--YYIYVVDEKGRLKGVL-------------------SLR 210 (473)
T ss_dssp TTBSTT--TCBSCEEEECTTCBHHHHHHHHHHHGGGCSEE--EEEEEECTTSBEEEEE-------------------EHH
T ss_pred CCCHHH--hCCCCceEeCCCCcHHHHHHHHHhccCCcCce--eEEEEECCCCcEEEEE-------------------EHH
Confidence 445554 8999999999999999999999886 47 9999999999999994 466
Q ss_pred hhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcC
Q 016003 261 DLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRR 340 (397)
Q Consensus 261 Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (397)
|++..-. ... ..++|+
T Consensus 211 Dll~~~~--------------------------------------------------------~~~--------v~dim~ 226 (473)
T 2zy9_A 211 DLIVADP--------------------------------------------------------RTR--------VAEIMN 226 (473)
T ss_dssp HHHHSCT--------------------------------------------------------TSB--------GGGTSB
T ss_pred HHhcCCC--------------------------------------------------------CCc--------HHHHhC
Confidence 6653100 000 113577
Q ss_pred CccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHH
Q 016003 341 AEAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 341 ~~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~ 393 (397)
++++++++++++.+++++|.+++++++||||++|+++|+||..||++.+.++.
T Consensus 227 ~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e~ 279 (473)
T 2zy9_A 227 PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 279 (473)
T ss_dssp SSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred CCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999987653
No 97
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.48 E-value=9.6e-15 Score=155.02 Aligned_cols=174 Identities=17% Similarity=0.221 Sum_probs=102.1
Q ss_pred cCCccccCCCC--cCeEEEeCCCcHHHHHHHHH-hcCCCCCEEEEEcCCCcEEEeeccCcccCcchh-HHHHHhhcChhh
Q 016003 186 ALSIDSLGIIS--TDVVAVDYHSPASLALEAIS-RSLFDQTSVAVVDSDGFLIGEISPSTLGCCDET-VAAAITTLSAGD 261 (397)
Q Consensus 186 ~~ti~~L~~~~--~~v~tv~~~~~~~~a~~~m~-~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~-~~~~~~~ls~~D 261 (397)
..++++ +|+ ++++++++++++.|+.+.|. ++++ +++||||++|+++|+||.+||.+...+ .......++..+
T Consensus 452 ~~~V~d--iM~p~~~v~~v~~~~t~~e~~~~~~~~~~~--~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~ 527 (632)
T 3org_A 452 EMTARE--IMHPIEGEPHLFPDSEPQHIKGILEKFPNR--LVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHR 527 (632)
T ss_dssp TSBHHH--HCBCTTTSCCBCSSSCHHHHHHHHHHSTTC--CEECBBCTTCBBCCEESHHHHTTTTTTC------------
T ss_pred cCcHHH--HhhcCCCceEecCCCcHHHHHHHHHhcCCc--ceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccc
Confidence 445555 799 89999999999999999999 7999 999999999999999888777763211 000000000000
Q ss_pred hhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC
Q 016003 262 LMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA 341 (397)
Q Consensus 262 l~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
.....+ .+++.+ .+....+. .| ... .....+ +..... .......++|++
T Consensus 528 ~~~~~~----~~~l~~---------~~~~~~~~-------~~----~~~--~~~~~e----~~~~~~-~~~~~v~~iMt~ 576 (632)
T 3org_A 528 TLVLLD----AADLSE---------NIEGLVDE-------TP----SGE--HSSKGK----RTATVL-EPTSSLVVPCDV 576 (632)
T ss_dssp --------------------------------------------------------------------------CCSCCC
T ss_pred ceeccC----HHHHHh---------hcccCCCC-------Cc----ccc--hhhhcc----cceEee-ccccccchhhcC
Confidence 000000 000000 00000000 00 000 000000 000000 000113357899
Q ss_pred ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHHHhh
Q 016003 342 EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKHLET 395 (397)
Q Consensus 342 ~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~~~~ 395 (397)
+++|+++++++.+++++|.++++|++||+ ++|+++||||++||++++.+.++.
T Consensus 577 ~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~~~~~~~ 629 (632)
T 3org_A 577 SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGYSNSLEV 629 (632)
T ss_dssp CCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECCCC----
T ss_pred CCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHHhhhHHH
Confidence 99999999999999999999999999999 668999999999999987766553
No 98
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.48 E-value=1.5e-13 Score=122.57 Aligned_cols=125 Identities=14% Similarity=0.190 Sum_probs=105.6
Q ss_pred cchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCC
Q 016003 7 ADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSL 86 (397)
Q Consensus 7 ~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~ 86 (397)
..+|+|+|. ++++++++++|+.+|+++|.++++.++||+|.+ ++++|+|+..||+.++.....
T Consensus 8 ~~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-------------g~~vGivt~~dl~~~~~~~~~-- 70 (184)
T 1pvm_A 8 FMRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-------------GNDVGLLSERSIIKRFIPRNK-- 70 (184)
T ss_dssp CCBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-------------SCEEEEEEHHHHHHHTGGGCC--
T ss_pred ccCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-------------CcEEEEEeHHHHHHHHhhccc--
Confidence 478999994 678999999999999999999999999999853 689999999999998764211
Q ss_pred ChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeee
Q 016003 87 SPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWL 165 (397)
Q Consensus 87 ~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~II 165 (397)
.....+++++|... ++++.+++++.+|++.|. ++.++++|++++ ++.+|+|
T Consensus 71 ---~~~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---------------------g~~~Giv 122 (184)
T 1pvm_A 71 ---KPDEVPIRLVMRKP----IPKVKSDYDVKDVAAYLSENGLERCAVVDDP---------------------GRVVGIV 122 (184)
T ss_dssp ---CGGGSBGGGTSBSS----CCEEETTCBHHHHHHHHHHHTCSEEEEECTT---------------------CCEEEEE
T ss_pred ---CcccCCHHHHhCCC----CcEECCCCCHHHHHHHHHHcCCcEEEEEcCC---------------------CeEEEEE
Confidence 22356899999754 889999999999999999 799999998632 4678999
Q ss_pred cHHHHHHHHHh
Q 016003 166 TQEDIIRFILS 176 (397)
Q Consensus 166 Tq~DIi~~l~~ 176 (397)
|..||++++.+
T Consensus 123 t~~dll~~~~~ 133 (184)
T 1pvm_A 123 TLTDLSRYLSR 133 (184)
T ss_dssp EHHHHTTTSCH
T ss_pred EHHHHHHHHHh
Confidence 99999987643
No 99
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.45 E-value=9.7e-14 Score=144.29 Aligned_cols=125 Identities=15% Similarity=0.142 Sum_probs=100.2
Q ss_pred cCCccccCCCCcCeEEEeCC-CcHHHHHHHHHhcCCCCCEEEEEc-CCCcEEEeeccCcccCcchhHHHHHhhcChhhhh
Q 016003 186 ALSIDSLGIISTDVVAVDYH-SPASLALEAISRSLFDQTSVAVVD-SDGFLIGEISPSTLGCCDETVAAAITTLSAGDLM 263 (397)
Q Consensus 186 ~~ti~~L~~~~~~v~tv~~~-~~~~~a~~~m~~~~i~~s~vpVVd-~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~ 263 (397)
..++++ +|+++++++.++ +++.+|+++|.++++ +++||+| ++|+++|+ +|.+||+
T Consensus 383 ~~~V~d--iM~~~~vtv~~~~~tv~ea~~~m~~~~~--~~lpVvd~~~g~lvGi-------------------Vt~~Dll 439 (527)
T 3pc3_A 383 SLAIAE--LELPAPPVILKSDATVGEAIALMKKHRV--DQLPVVDQDDGSVLGV-------------------VGQETLI 439 (527)
T ss_dssp TSBGGG--GCCCCCSCCEETTCBHHHHHHHHHHHTC--SEEEEECTTTCCEEEE-------------------EEHHHHH
T ss_pred CCcHHH--hCcCCCeEEcCCCCcHHHHHHHHHHcCC--CeEEEEECCCCEEEEE-------------------EEHHHHH
Confidence 566766 799999999999 999999999999999 9999999 78999999 5567776
Q ss_pred hhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCcc
Q 016003 264 AYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEA 343 (397)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
..+.. . . . . . ..+..++|++++
T Consensus 440 ~~l~~-------------~----~--------~-----~--------------------~--------~~~V~~im~~~~ 461 (527)
T 3pc3_A 440 TQIVS-------------M----N--------R-----Q--------------------Q--------SDPAIKALNKRV 461 (527)
T ss_dssp HHHHH-------------H----C--------C-----C--------------------T--------TSBGGGGEETTC
T ss_pred HHHHh-------------c----c--------C-----c--------------------C--------CCcHHHHhcCCC
Confidence 52210 0 0 0 0 0 001124688899
Q ss_pred EEeCCCCcHHHHHHHHHHcCCcEEEEEcCC----CcEEEEEehHHHHHHHHHHH
Q 016003 344 IVCHPTSSLMAVMIQAIAHRVTYVWVIEDD----CTLTGIVTFSDLLKVFRKHL 393 (397)
Q Consensus 344 it~~~~~sl~~v~~~m~~~~i~rl~VVd~~----~~lvGvVt~~DIl~~l~~~~ 393 (397)
++|++++++.+++++|.++++ +||||++ |+++||||+.||++++.++.
T Consensus 462 ~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 462 IRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp CEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred eEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 999999999999999987775 7999985 89999999999999998753
No 100
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.43 E-value=4.4e-13 Score=126.48 Aligned_cols=133 Identities=15% Similarity=0.138 Sum_probs=103.0
Q ss_pred ccccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhc-
Q 016003 4 SLLADEVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKD- 82 (397)
Q Consensus 4 ~~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~- 82 (397)
...+++|+|+| +++++++.+++++.+|.++|.++++.++||+|..+ +++++|+|+..||+..+...
T Consensus 9 ~~~~~~v~diM--t~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~-----------~~~LvGiIt~~dl~~~l~~~~ 75 (250)
T 2d4z_A 9 NKYNIQVGDIM--VRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPD-----------TNTLLGSIDRTEVEGLLQRRI 75 (250)
T ss_dssp CCSSCBTTSSS--BSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTT-----------TCBEEEEEEHHHHHHHHHHHH
T ss_pred ccCCCChHHhc--CCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCC-----------CCeEEEEEEHHHHHHHHHHhh
Confidence 34578899999 46899999999999999999999999999999632 26899999999999876521
Q ss_pred --CCC-------------------------------CCh-----------------------------------------
Q 016003 83 --SNS-------------------------------LSP----------------------------------------- 88 (397)
Q Consensus 83 --~~l-------------------------------~~~----------------------------------------- 88 (397)
... .+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 155 (250)
T 2d4z_A 76 SAYRRQPAAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQK 155 (250)
T ss_dssp HTTSSSCCCCCCBCCC----------------------------------------------------------------
T ss_pred hhhhhhhhhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCcccccccccccccccccccc
Confidence 000 000
Q ss_pred -------------------------hhhhcCCh--h-hhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcc
Q 016003 89 -------------------------SLALKQPV--S-VLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRL 139 (397)
Q Consensus 89 -------------------------~~~~~~~V--~-~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~ 139 (397)
...+..+| + .+|+.+ +++|.++++|.++..+|. .|+++++|...
T Consensus 156 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~s----P~tv~~~tsL~~v~~LF~~lglr~l~V~~~--- 228 (250)
T 2d4z_A 156 KQKGTGQVASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQS----PFQLVEGTSLQKTHTLFSLLGLDRAYVTSM--- 228 (250)
T ss_dssp -----------CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECC----SCCBCTTCBHHHHHHHHHHHTCSEEEEEET---
T ss_pred ccccccccCcccccccChhhhhhHHHHhcCceeccccccccCC----CeEECCCCcHHHHHHHHHHhCCeEEEEEEC---
Confidence 00022333 2 245544 788999999999999999 79999999852
Q ss_pred hhhhhhhcccccccccCCCCceeeeecHHHHHHHHH
Q 016003 140 SIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFIL 175 (397)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~l~ 175 (397)
|+++||||..||++.+.
T Consensus 229 -------------------GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 229 -------------------GKLVGVVALAEIQAAIE 245 (250)
T ss_dssp -------------------TEEEEEEEHHHHHHHHH
T ss_pred -------------------CEEEEEEEHHHHHHHHH
Confidence 47899999999999986
No 101
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.42 E-value=1.1e-12 Score=119.78 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=104.4
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhC---CCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhh
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNS---DESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCK 81 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~---~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~ 81 (397)
+...+++++| .++++++++++|+.+|++.|.++ ++..+||+|. +++++|+|+..|++..
T Consensus 51 ~~~~~v~~iM--~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~-------------~~~lvGivt~~dll~~--- 112 (205)
T 3kxr_A 51 YSENEIGRYT--DHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE-------------ADKYLGTVRRYDIFKH--- 112 (205)
T ss_dssp SCTTCGGGGC--BCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT-------------TCBEEEEEEHHHHTTS---
T ss_pred CCcchHHhhc--cCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC-------------CCeEEEEEEHHHHHhC---
Confidence 4567899999 46899999999999999999998 8999999996 3689999999998742
Q ss_pred cCCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCc
Q 016003 82 DSNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGR 160 (397)
Q Consensus 82 ~~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (397)
..+.+|+++|... ++++.+++++.+|++.|. ++++++||++++ |+
T Consensus 113 ---------~~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~---------------------g~ 158 (205)
T 3kxr_A 113 ---------EPHEPLISLLSED----SRALTANTTLLDAAEAIEHSREIELPVIDDA---------------------GE 158 (205)
T ss_dssp ---------CTTSBGGGGCCSS----CCCEETTSCHHHHHHHHHTSSCSEEEEECTT---------------------SB
T ss_pred ---------CCcchHHHHhcCC----CeEECCCCCHHHHHHHHHhcCCCEEEEEcCC---------------------Ce
Confidence 1246899999755 889999999999999999 799999998632 46
Q ss_pred eeeeecHHHHHHHHHhc
Q 016003 161 EFCWLTQEDIIRFILSS 177 (397)
Q Consensus 161 ~~~IITq~DIi~~l~~~ 177 (397)
.+||||..||++.+.+.
T Consensus 159 lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 159 LIGRVTLRAATALVREH 175 (205)
T ss_dssp EEEEEEHHHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHHHH
Confidence 88999999999999864
No 102
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.40 E-value=8.6e-13 Score=136.55 Aligned_cols=114 Identities=18% Similarity=0.180 Sum_probs=96.2
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcC--CCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCC
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDS--DGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGP 271 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~--~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~ 271 (397)
.|..+++++.+++++.+|+++|.++++ +++||+|+ +|+++|+| +.+|++...+.
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~--s~~pVvd~g~~~~lvGiV-------------------t~rDl~~~~~~--- 173 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRI--SGVPVVNNLDERKLVGII-------------------TNRDMRFIQDY--- 173 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCC--SEEEEESCTTTCBEEEEE-------------------EHHHHTTCCCS---
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCC--cEEEEEecCCCCEEEEEE-------------------EehHhhhhccC---
Confidence 577889999999999999999999999 99999998 89999994 56666430000
Q ss_pred CchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC-ccEEeCCCC
Q 016003 272 PEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA-EAIVCHPTS 350 (397)
Q Consensus 272 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~it~~~~~ 350 (397)
. ....++|++ +++|++++.
T Consensus 174 ----------------------------------------------------~--------~~V~~vM~~~~~vtv~~~~ 193 (511)
T 3usb_A 174 ----------------------------------------------------S--------IKISDVMTKEQLITAPVGT 193 (511)
T ss_dssp ----------------------------------------------------S--------SBHHHHCCCCCCCCEETTC
T ss_pred ----------------------------------------------------C--------CcHHHhcccCCCEEECCCC
Confidence 0 001235676 999999999
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 351 SLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 351 sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
++.++++.|.+++++++||||++|+++|+||+.||++.+..
T Consensus 194 ~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 194 TLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 99999999999999999999999999999999999998854
No 103
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.35 E-value=3.3e-12 Score=131.56 Aligned_cols=114 Identities=18% Similarity=0.212 Sum_probs=96.4
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEc--CCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCC
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVD--SDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGP 271 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd--~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~ 271 (397)
+|+.+++++.+++++.+|++.|.++++ +++||+| ++++++|+| +.+|++...+.
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~--~~~pVvd~~~~~~lvGiv-------------------t~~Dl~~~~~~--- 150 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRI--SGVPIVETLANRKLVGII-------------------TNRDMRFISDY--- 150 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTC--SEEEEESCTTTCBEEEEE-------------------EHHHHHHCSCS---
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCC--CEEEEEEeCCCCEEEEEE-------------------EHHHHhhhccC---
Confidence 788899999999999999999999999 9999999 789999994 56666531100
Q ss_pred CchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC-ccEEeCCCC
Q 016003 272 PEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA-EAIVCHPTS 350 (397)
Q Consensus 272 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~it~~~~~ 350 (397)
... ..++|+. +++++++++
T Consensus 151 ----------------------------------------------------~~~--------v~~im~~~~~~~v~~~~ 170 (491)
T 1zfj_A 151 ----------------------------------------------------NAP--------ISEHMTSEHLVTAAVGT 170 (491)
T ss_dssp ----------------------------------------------------SSB--------TTTSCCCSCCCCEETTC
T ss_pred ----------------------------------------------------CCc--------HHHHcCCCCCEEECCCC
Confidence 000 0124676 899999999
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 351 SLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 351 sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
++.+++++|.+++++++||||++|+++|+||+.||++.+.+
T Consensus 171 ~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 171 DLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp CHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 99999999999999999999999999999999999999863
No 104
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.33 E-value=2.5e-12 Score=133.58 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=105.6
Q ss_pred cccchhhhhhcCCCCeEEEeCC-hhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcC
Q 016003 5 LLADEVSDLCLGKPALRALSIS-AAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDS 83 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~-~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~ 83 (397)
|...+|+|+|. +++++++++ +|+.+|+++|.++++.++||+|.+ +++++|+|+..||++++....
T Consensus 381 l~~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~------------~g~lvGiVt~~Dll~~l~~~~ 446 (527)
T 3pc3_A 381 WWSLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQD------------DGSVLGVVGQETLITQIVSMN 446 (527)
T ss_dssp TTTSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT------------TCCEEEEEEHHHHHHHHHHHC
T ss_pred ccCCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC------------CCEEEEEEEHHHHHHHHHhcc
Confidence 44678999994 678999999 999999999999999999999921 368999999999999887532
Q ss_pred CCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCcee
Q 016003 84 NSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREF 162 (397)
Q Consensus 84 ~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
...+.+|+++|... ++++.++++|.+++++|. +++ ++|++++.. ..++++
T Consensus 447 ------~~~~~~V~~im~~~----~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~-----------------~~g~lv 497 (527)
T 3pc3_A 447 ------RQQSDPAIKALNKR----VIRLNESEILGKLARVLEVDPS--VLILGKNPA-----------------GKVELK 497 (527)
T ss_dssp ------CCTTSBGGGGEETT----CCEEETTSBHHHHHHHHTTCSE--EEEEEECSS-----------------SCEEEE
T ss_pred ------CcCCCcHHHHhcCC----CeEECCCCcHHHHHHHHhhCCE--EEEEeCCcc-----------------cCCeEE
Confidence 12357899999765 899999999999999997 343 466653200 124678
Q ss_pred eeecHHHHHHHHHhcc
Q 016003 163 CWLTQEDIIRFILSSI 178 (397)
Q Consensus 163 ~IITq~DIi~~l~~~~ 178 (397)
||||+.||++++.++.
T Consensus 498 GIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 498 ALATKLDVTTFIAAGK 513 (527)
T ss_dssp EEEEHHHHHHHHHTCC
T ss_pred EEEEHHHHHHHHHhcc
Confidence 9999999999998653
No 105
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.32 E-value=4.4e-12 Score=121.67 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=104.0
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHH
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNS-----DESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYL 79 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~-----~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l 79 (397)
+...+|+++|. ++++++++++|+.+|++.|.++ ++..+||+|. +++++|+|+..|++..
T Consensus 134 ~~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~-------------~~~lvGivt~~dll~~- 197 (286)
T 2oux_A 134 YEDETAGAIMT--TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ-------------ENHLVGVISLRDLIVN- 197 (286)
T ss_dssp SCTTBHHHHCB--SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT-------------TCBEEEEEEHHHHTTS-
T ss_pred CChHHHHHhCC--CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC-------------CCeEEEEEEHHHHHcC-
Confidence 34678999994 6799999999999999999998 8888999996 3689999999999853
Q ss_pred hhcCCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCC
Q 016003 80 CKDSNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHN 158 (397)
Q Consensus 80 ~~~~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (397)
..+.+|+++|... ++++.+++++.+|++.|. +++++++|++++
T Consensus 198 -----------~~~~~v~~im~~~----~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~--------------------- 241 (286)
T 2oux_A 198 -----------DDDTLIADILNER----VISVHVGDDQEDVAQTIRDYDFLAVPVTDYD--------------------- 241 (286)
T ss_dssp -----------CTTSBHHHHSBSC----CCCEETTSBHHHHHHHHHHHTCSEEEEECTT---------------------
T ss_pred -----------CCCCcHHHHcCCC----CeeecCCCCHHHHHHHHHHcCCcEEEEEcCC---------------------
Confidence 1246899999755 889999999999999999 799999998632
Q ss_pred CceeeeecHHHHHHHHHhc
Q 016003 159 GREFCWLTQEDIIRFILSS 177 (397)
Q Consensus 159 ~~~~~IITq~DIi~~l~~~ 177 (397)
|+.+|+||..||++++.+.
T Consensus 242 g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 242 DHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp CBEEEEEEHHHHHHHHHHH
T ss_pred CeEEEEEEHHHHHHHHHHH
Confidence 4688999999999998763
No 106
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.29 E-value=2.6e-13 Score=140.23 Aligned_cols=115 Identities=18% Similarity=0.147 Sum_probs=0.4
Q ss_pred CCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCC---CcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCC
Q 016003 195 ISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSD---GFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGP 271 (397)
Q Consensus 195 ~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~---g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~ 271 (397)
|+++++++.+++++.+|+++|.++++ +++||+|++ |+++|+||..||.+. . .+
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~--s~~pVvd~~~~~g~lvGiVt~~Dl~~~-----------------~-~~---- 158 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTH--NTVAVTDDGTPHGVLLGLVTQRDYPID-----------------L-TQ---- 158 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCc--eEEEEEECCCcCCeEEEEEEHHHHHhh-----------------h-cc----
Confidence 88899999999999999999999999 999999987 899999664444430 0 00
Q ss_pred CchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCc--cEEeCCC
Q 016003 272 PEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAE--AIVCHPT 349 (397)
Q Consensus 272 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~it~~~~ 349 (397)
. . .. ..++|+++ +++|+++
T Consensus 159 -----------~------------~----------------------------~~--------V~diM~~~~~~~tv~~~ 179 (503)
T 1me8_A 159 -----------T------------E----------------------------TK--------VSDMMTPFSKLVTAHQD 179 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------c------------c----------------------------Cc--------HHHHhCCCCCCEEEcCC
Confidence 0 0 00 01245655 9999999
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHHH
Q 016003 350 SSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRKH 392 (397)
Q Consensus 350 ~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~~ 392 (397)
+++.+++++|.+++++++||||++|+++|+||..||++.+...
T Consensus 180 ~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 180 TKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp ------------------------------------------C
T ss_pred CcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 9999999999999999999999999999999999999988653
No 107
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.29 E-value=2.7e-13 Score=138.29 Aligned_cols=110 Identities=19% Similarity=0.212 Sum_probs=0.0
Q ss_pred CCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcC---CCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCC
Q 016003 195 ISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDS---DGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGP 271 (397)
Q Consensus 195 ~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~---~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~ 271 (397)
|-.+++++.|+.++.||+++|.++++ +++||+|+ +|+|+||| +.+|++. .+.
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~i--sgvpVvd~g~~~~kLvGIv-------------------T~RD~rf-~d~--- 198 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGF--CGVPITETGEPDSKLLGIV-------------------TGRDVQF-QDA--- 198 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCC--CccccccccCcCCEEEEEE-------------------ecccccc-ccc---
Confidence 45679999999999999999999999 99999987 67999995 4566542 110
Q ss_pred CchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCc
Q 016003 272 PEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSS 351 (397)
Q Consensus 272 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~s 351 (397)
... ..++|+++++|++.+.+
T Consensus 199 ----------------------------------------------------~~~--------V~evMT~~lvt~~~~~~ 218 (556)
T 4af0_A 199 ----------------------------------------------------ETP--------IKSVMTTEVVTGSSPIT 218 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------ceE--------hhhhcccceEEecCCCC
Confidence 000 11357889999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHH
Q 016003 352 LMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVF 389 (397)
Q Consensus 352 l~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l 389 (397)
+.+|.+.|.+|++..+||||++++|+|+||..||++.-
T Consensus 219 leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 219 LEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 99999999999999999999999999999999999864
No 108
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.29 E-value=6.8e-13 Score=136.84 Aligned_cols=112 Identities=21% Similarity=0.202 Sum_probs=80.9
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCc
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPE 273 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~ 273 (397)
+|..+++++.+++++.+|+++|.++++ +++||+|++|+++|+| +.+|++...+.
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~--s~~PVvd~~~~lvGiV-------------------t~rDL~~~~~~----- 147 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGF--AGFPVVTENNELVGII-------------------TGRDVRFVTDL----- 147 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCC--CEEEEECSSSBEEEEE-------------------EHHHHTTCCCT-----
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCC--cEEEEEccCCEEEEEE-------------------EHHHHhhcccC-----
Confidence 688899999999999999999999999 9999999999999995 46666520000
Q ss_pred hhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcC-C-ccEEeCCCCc
Q 016003 274 DLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRR-A-EAIVCHPTSS 351 (397)
Q Consensus 274 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~it~~~~~s 351 (397)
... ..++|+ . ++++++++.+
T Consensus 148 --------------------------------------------------~~~--------v~diM~p~~~~vtv~~~~~ 169 (496)
T 4fxs_A 148 --------------------------------------------------TKS--------VAAVMTPKERLATVKEGAT 169 (496)
T ss_dssp --------------------------------------------------TSB--------GGGTSEEGGGCCEEECC--
T ss_pred --------------------------------------------------CCc--------HHHHhcCCCCCEEECCCCC
Confidence 000 112455 3 6999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHH
Q 016003 352 LMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVF 389 (397)
Q Consensus 352 l~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l 389 (397)
+.++++.|.+++++++||||++|+++|+||+.||++..
T Consensus 170 l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 170 GAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp --CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred HHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 99999999999999999999999999999999999864
No 109
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.29 E-value=2.9e-13 Score=139.64 Aligned_cols=114 Identities=21% Similarity=0.286 Sum_probs=5.6
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCc
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPE 273 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~ 273 (397)
+|+++++++++++++.+|++.|.++++ +++||||++|+++|+||..||.+. .+.
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~--~~~pVvd~~~~lvGivt~~Dl~~~-------------------~~~----- 153 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKI--GGLPVVDEEGRLVGLLTNRDVRFE-------------------KNL----- 153 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCc--eEEEEEcCCCEEEEEEEHHHHHhh-------------------cCC-----
Confidence 688899999999999999999999999 999999998999999664444330 000
Q ss_pred hhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCC--ccEEeCCCCc
Q 016003 274 DLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRA--EAIVCHPTSS 351 (397)
Q Consensus 274 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~it~~~~~s 351 (397)
. .. ..++|++ ++++++++++
T Consensus 154 ----------------------~----------------------------~~--------v~~im~~~~~~~~v~~~~~ 175 (494)
T 1vrd_A 154 ----------------------S----------------------------KK--------IKDLMTPREKLIVAPPDIS 175 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------C----------------------------Cc--------HHHHhCCCCCCeEECCCCC
Confidence 0 00 0124666 8999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 352 LMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 352 l~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+.+++++|.+++++++||||++|+++|+||..||++.+..
T Consensus 176 l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 176 LEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp ---------------------------------CHHHHTC
T ss_pred HHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 9999999999999999999999999999999999998754
No 110
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.28 E-value=2.3e-12 Score=136.68 Aligned_cols=170 Identities=11% Similarity=0.077 Sum_probs=103.4
Q ss_pred ccchhhhhhcCCCCeEEEeCChhHHHHHHHHh-hCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCC
Q 016003 6 LADEVSDLCLGKPALRALSISAAIADALSALK-NSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSN 84 (397)
Q Consensus 6 ~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~-~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~ 84 (397)
.+++|+|+|...++++++++++|+.|+.+.|. ++++.++||+|+ +++++|+|+..|+++.+.+...
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~-------------~~~lvGiVt~~DL~~~l~~~~~ 517 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA-------------NGYLLGAISRKEIVDRLQHVLE 517 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT-------------TCBBCCEESHHHHTTTTTTC--
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec-------------CCeEEEEEEHHHHHHHHHHHhh
Confidence 56789999976578999999999999999999 899999999996 3689999999999987653210
Q ss_pred CCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHhcCCceEEEeccCcchhhhhhhcccccccccCCCCceeee
Q 016003 85 SLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLMLGGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCW 164 (397)
Q Consensus 85 l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 164 (397)
....+.. .. ..........+.+.++.+... . +. .....
T Consensus 518 ------~~~~~~~---~~----~~~~~~~~~~l~~~~~~~~~~---~--~~------------------------~~~~~ 555 (632)
T 3org_A 518 ------DVPEPIA---GH----RTLVLLDAADLSENIEGLVDE---T--PS------------------------GEHSS 555 (632)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------hcccccc---cc----cceeccCHHHHHhhcccCCCC---C--cc------------------------cchhh
Confidence 0011100 00 011111222222222111100 0 00 00011
Q ss_pred ecHHHHHHHHHhccCCCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCccc
Q 016003 165 LTQEDIIRFILSSISLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLG 244 (397)
Q Consensus 165 ITq~DIi~~l~~~~~~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~ 244 (397)
.++.|...+ . +..++++ +|++++++|++++++.+|+++|.++++ ..+||+ ++|+++|+||.+||.
T Consensus 556 ~~e~~~~~~--------~--~~~~v~~--iMt~~pitV~~~~~l~ea~~~M~~~~i--~~lpVv-e~G~lvGIVT~~Dll 620 (632)
T 3org_A 556 KGKRTATVL--------E--PTSSLVV--PCDVSPIVVTSYSLVRQLHFLFVMLMP--SMIYVT-ERGKLVGIVEREDVA 620 (632)
T ss_dssp -------------------------CC--SCCCCCCEEETTCBHHHHHHHHHHTCC--SEEEEE-ETTEEEEEEEGGGTE
T ss_pred hcccceEee--------c--cccccch--hhcCCCceecCCCcHHHHHHHHHhcCC--CEEEEE-ECCEEEEEEehhhHH
Confidence 122222221 0 1123444 899999999999999999999999999 999999 789999999888887
Q ss_pred C
Q 016003 245 C 245 (397)
Q Consensus 245 ~ 245 (397)
+
T Consensus 621 ~ 621 (632)
T 3org_A 621 Y 621 (632)
T ss_dssp E
T ss_pred H
Confidence 6
No 111
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.27 E-value=1.1e-11 Score=118.26 Aligned_cols=120 Identities=21% Similarity=0.228 Sum_probs=101.7
Q ss_pred cccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHH
Q 016003 5 LLADEVSDLCLGKPALRALSISAAIADALSALKNS-----DESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYL 79 (397)
Q Consensus 5 ~~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~-----~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l 79 (397)
+...+++++|. ++++++++++|+.+|++.|.++ ++..+||+|. +++++|+|+..|++..
T Consensus 132 ~~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~-------------~~~lvGivt~~dll~~- 195 (278)
T 2yvy_A 132 YEEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE-------------KGRLKGVLSLRDLIVA- 195 (278)
T ss_dssp SCTTBGGGTCB--SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT-------------TCBEEEEEEHHHHHHS-
T ss_pred CCcchHHhhcC--CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC-------------CCCEEEEEEHHHHhcC-
Confidence 34678999994 5799999999999999999997 8999999996 3689999999999853
Q ss_pred hhcCCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCC
Q 016003 80 CKDSNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHN 158 (397)
Q Consensus 80 ~~~~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (397)
..+.+|+++|... ++++.+++++.+|++.|. ++.++++|++.+
T Consensus 196 -----------~~~~~v~~im~~~----~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--------------------- 239 (278)
T 2yvy_A 196 -----------DPRTRVAEIMNPK----VVYVRTDTDQEEVARLMADYDFTVLPVVDEE--------------------- 239 (278)
T ss_dssp -----------CTTCBSTTTSBSS----CCCEETTSBHHHHHHHHHHHTCSEEEEECTT---------------------
T ss_pred -----------CCCCcHHHHhCCC----CeEEeCCCCHHHHHHHHHhcCCCEEEEEeCC---------------------
Confidence 1246899999654 889999999999999999 799999998632
Q ss_pred CceeeeecHHHHHHHHHh
Q 016003 159 GREFCWLTQEDIIRFILS 176 (397)
Q Consensus 159 ~~~~~IITq~DIi~~l~~ 176 (397)
|+.+|+||..||++.+.+
T Consensus 240 g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 240 GRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp SBEEEEEEHHHHHHHC--
T ss_pred CeEEEEEEHHHHHHHHHH
Confidence 468899999999998864
No 112
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.25 E-value=5.6e-13 Score=137.30 Aligned_cols=112 Identities=21% Similarity=0.296 Sum_probs=0.0
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCc
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPE 273 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~ 273 (397)
+|..+++++.+++++.+|+++|.++++ +++||+| +|+++|+|| .+|++...+.
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~--s~~pVvd-~g~lvGIVt-------------------~rDl~~~~~~----- 145 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGF--SGFPVVE-QGELVGIVT-------------------GRDLRVKPNA----- 145 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCC--CEEEEEE-CCEEEEEEE-------------------hHHhhhcccc-----
Confidence 677889999999999999999999999 9999999 789999955 4554320000
Q ss_pred hhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcC-C-ccEEeCCCCc
Q 016003 274 DLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRR-A-EAIVCHPTSS 351 (397)
Q Consensus 274 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~it~~~~~s 351 (397)
. .. ..++|+ . +++|++++.+
T Consensus 146 ----------------------~----------------------------~~--------V~~vMtp~~~~vtv~~~~~ 167 (490)
T 4avf_A 146 ----------------------G----------------------------DT--------VAAIMTPKDKLVTAREGTP 167 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------C----------------------------Cc--------HHHHhccCCCCEEECCCCc
Confidence 0 00 012456 3 6999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHH
Q 016003 352 LMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFR 390 (397)
Q Consensus 352 l~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~ 390 (397)
+.+++++|.+++++++||||++|+++|+||+.||++...
T Consensus 168 l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 168 LEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 999999999999999999999999999999999999863
No 113
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.12 E-value=1.1e-12 Score=136.09 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=73.7
Q ss_pred cHHHHHHHHHhccCCCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcC---CCcEEEeeccCc
Q 016003 166 TQEDIIRFILSSISLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDS---DGFLIGEISPST 242 (397)
Q Consensus 166 Tq~DIi~~l~~~~~~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~---~g~lvG~is~~d 242 (397)
|..++.+++..- +++. ++|.++++++++++++.+|+++|.++++ +++||||+ +|+++|+||..|
T Consensus 96 t~e~~~~~v~~v---------~~~~--~im~~~~~~v~~~~tv~ea~~~m~~~~~--~~~pVvd~~~~~~~lvGiVt~~D 162 (514)
T 1jcn_A 96 TPEFQANEVRKV---------KNFE--QGFITDPVVLSPSHTVGDVLEAKMRHGF--SGIPITETGTMGSKLVGIVTSRD 162 (514)
T ss_dssp CHHHHHHHHHHH---------HTCC--TTSCSSCCCCCC-------------------CEESCC--------CCEECTTT
T ss_pred CHHHHHHHHHhh---------hhhh--hccccCCEEECCCCCHHHHHHHHHhcCC--CEEEEEeCCCcCCEEEEEEEHHH
Confidence 666666665321 1233 3688889999999999999999999999 99999998 589999977655
Q ss_pred ccCcchhHHHHHhhcChhhhhhhhccCCCCchhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccc
Q 016003 243 LGCCDETVAAAITTLSAGDLMAYIDCGGPPEDLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLT 322 (397)
Q Consensus 243 l~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (397)
|.+.. . . . .
T Consensus 163 l~~~~-----------~----~--~----------------------------~-------------------------- 171 (514)
T 1jcn_A 163 IDFLA-----------E----K--D----------------------------H-------------------------- 171 (514)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred HHhhh-----------h----c--c----------------------------C--------------------------
Confidence 54410 0 0 0 0
Q ss_pred cCCCccccccchhhhhcCC--ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHH
Q 016003 323 RSGKHSRSMSYSARMVRRA--EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVF 389 (397)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~--~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l 389 (397)
... ..++|+. +++|+++++++.+++++|.+++++++||||++|+++|+||++||++.+
T Consensus 172 -~~~--------v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 172 -TTL--------LSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred -CCC--------HHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 000 0124666 899999999999999999999999999999999999999999998765
No 114
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.11 E-value=1.1e-10 Score=88.45 Aligned_cols=66 Identities=9% Similarity=0.064 Sum_probs=55.7
Q ss_pred CeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChhhhhcCChhh
Q 016003 19 ALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSLALKQPVSV 98 (397)
Q Consensus 19 ~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~~~~~~~V~~ 98 (397)
+++++.+++|+.+|+++|.+++++++||.|. ++++||||.+||++.+.... ....+.+|++
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--------------~~lvGIvT~~Di~~~~~~~~-----~~~~~~~V~~ 61 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--------------DEILGVVTERDILDKVVAKG-----KNPKEVKVEE 61 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--------------TEEEEEEEHHHHHHHTTTTT-----CCGGGCBGGG
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEEC--------------CEEEEEEEHHHHHHHHHhcC-----CCcccCCHHH
Confidence 4799999999999999999999999999984 68999999999998765421 1234679999
Q ss_pred hccCC
Q 016003 99 LLPQL 103 (397)
Q Consensus 99 lm~~~ 103 (397)
+|..+
T Consensus 62 iMt~~ 66 (70)
T 3ghd_A 62 IMTKN 66 (70)
T ss_dssp TCEEC
T ss_pred hcCCC
Confidence 99754
No 115
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.11 E-value=9.7e-10 Score=113.68 Aligned_cols=164 Identities=16% Similarity=0.080 Sum_probs=119.8
Q ss_pred hhhhhcC----CCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCC
Q 016003 10 VSDLCLG----KPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNS 85 (397)
Q Consensus 10 v~dl~~~----k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l 85 (397)
|.+++.. .++++++++++|+.+|+++|.+++++.+||+|.. . +++++|+|+.+|+.. .
T Consensus 109 V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~----------~~~lvGiVt~rDl~~---~---- 170 (511)
T 3usb_A 109 VDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-D----------ERKLVGIITNRDMRF---I---- 170 (511)
T ss_dssp HHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-T----------TCBEEEEEEHHHHTT---C----
T ss_pred HHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-C----------CCEEEEEEEehHhhh---h----
Confidence 5666644 3567899999999999999999999999999951 0 268999999999963 1
Q ss_pred CChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeee
Q 016003 86 LSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCW 164 (397)
Q Consensus 86 ~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 164 (397)
...+.+|+++|.. .+++++.+++++.++++.|. +++++++|++++ +...|+
T Consensus 171 ----~~~~~~V~~vM~~---~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~---------------------g~l~Gi 222 (511)
T 3usb_A 171 ----QDYSIKISDVMTK---EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNN---------------------GVLQGL 222 (511)
T ss_dssp ----CCSSSBHHHHCCC---CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTT---------------------SBEEEE
T ss_pred ----ccCCCcHHHhccc---CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCC---------------------CCEeee
Confidence 1235789999974 24899999999999999999 799999998643 467899
Q ss_pred ecHHHHHHHHHhccCCCCCCccCCccccCCCCcC--eEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCC
Q 016003 165 LTQEDIIRFILSSISLFSPIPALSIDSLGIISTD--VVAVDYHSPASLALEAISRSLFDQTSVAVVDSDG 232 (397)
Q Consensus 165 ITq~DIi~~l~~~~~~l~~l~~~ti~~L~~~~~~--v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g 232 (397)
||..||++.+...... . +.+.+- -..+.......+.++.+.+.++ ..+.|-..++
T Consensus 223 IT~~Dil~~~~~p~a~---------~--D~~~rl~V~aavg~~~d~~era~aLveaGv--d~I~Id~a~g 279 (511)
T 3usb_A 223 ITIKDIEKVIEFPNSA---------K--DKQGRLLVGAAVGVTADAMTRIDALVKASV--DAIVLDTAHG 279 (511)
T ss_dssp EEHHHHHHHHHCTTCC---------B--CTTSCBCCEEEECSSTTHHHHHHHHHHTTC--SEEEEECSCT
T ss_pred ccHHHHHHhhhcccch---------h--hhccceeeeeeeeeccchHHHHHHHHhhcc--ceEEeccccc
Confidence 9999999998531110 0 111211 2334444455666777777777 6666654433
No 116
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.11 E-value=1.8e-10 Score=118.16 Aligned_cols=119 Identities=21% Similarity=0.230 Sum_probs=102.7
Q ss_pred ccchhhhhhcCCCCeEEEeCChhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHh
Q 016003 6 LADEVSDLCLGKPALRALSISAAIADALSALKNS-----DESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLC 80 (397)
Q Consensus 6 ~~~~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~-----~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~ 80 (397)
...+++++|. ++++++++++|+.+|++.|.++ ++..+||+|. +++++|+++.+|++..
T Consensus 153 ~~~~v~~iM~--~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~-------------~~~lvGiVt~~Dll~~-- 215 (473)
T 2zy9_A 153 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE-------------KGRLKGVLSLRDLIVA-- 215 (473)
T ss_dssp CTTBSTTTCB--SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT-------------TSBEEEEEEHHHHHHS--
T ss_pred CCCCHHHhCC--CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC-------------CCcEEEEEEHHHHhcC--
Confidence 4667899994 6899999999999999999996 6899999996 3689999999999853
Q ss_pred hcCCCCChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCC
Q 016003 81 KDSNSLSPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNG 159 (397)
Q Consensus 81 ~~~~l~~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
..+.+|+++|.+. ++++.+++++.++++.|. ++.+.++|++++ |
T Consensus 216 ----------~~~~~v~dim~~~----~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~---------------------g 260 (473)
T 2zy9_A 216 ----------DPRTRVAEIMNPK----VVYVRTDTDQEEVARLMADYDFTVLPVVDEE---------------------G 260 (473)
T ss_dssp ----------CTTSBGGGTSBSS----CCCEESSSBHHHHHHHHHHHTCSEEEEECTT---------------------S
T ss_pred ----------CCCCcHHHHhCCC----CeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC---------------------C
Confidence 1246899999754 899999999999999999 799999998632 4
Q ss_pred ceeeeecHHHHHHHHHh
Q 016003 160 REFCWLTQEDIIRFILS 176 (397)
Q Consensus 160 ~~~~IITq~DIi~~l~~ 176 (397)
+.+|+||..||++.+.+
T Consensus 261 ~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 261 RLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp BEEEEEEHHHHHHHHHH
T ss_pred EEEEEEehHhhHHHHHH
Confidence 68899999999999865
No 117
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.04 E-value=2.1e-11 Score=125.45 Aligned_cols=110 Identities=20% Similarity=0.300 Sum_probs=0.4
Q ss_pred CCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcchhHHHHHhhcChhhhhhhhccCCCCc
Q 016003 194 IISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCDETVAAAITTLSAGDLMAYIDCGGPPE 273 (397)
Q Consensus 194 ~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~~~~~~~~~~ls~~Dl~~~~~~~~~~~ 273 (397)
.|..+++++.+++++.+++++|.++++ +++||+|+ ++++|+|| .+|++. +.
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~--~~~pVvd~-~~lvGivt-------------------~~Dl~~--~~----- 148 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGI--DGLPVVED-EKVVGIIT-------------------KKDIAA--RE----- 148 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCC--cEEEEEEC-CEEEEEEE-------------------HHHhcc--CC-----
Confidence 577889999999999999999999999 99999998 89999955 455432 00
Q ss_pred hhHHHHHHHhhhcchhhhhhhhccccCCCCCCCCCCCCCccchhhhccccCCCccccccchhhhhcCCccEEeCCCCcHH
Q 016003 274 DLVRVVKERLKDKGLEGMLEHFDMSSSLMPYLSTSSSSDEESTATSKLTRSGKHSRSMSYSARMVRRAEAIVCHPTSSLM 353 (397)
Q Consensus 274 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it~~~~~sl~ 353 (397)
. . . ..++|..+++++++++++.
T Consensus 149 --------~-------------------~-----------------------~--------v~~im~~~~~~v~~~~~l~ 170 (486)
T 2cu0_A 149 --------G-------------------K-----------------------L--------VKELMTKEVITVPESIEVE 170 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------C-------------------C-----------------------C--------HHHHccCCCeEECCcCcHH
Confidence 0 0 0 0123566889999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHH
Q 016003 354 AVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFR 390 (397)
Q Consensus 354 ~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~ 390 (397)
++++.|.+++++++||||++|+++|+||..||++.+.
T Consensus 171 eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 171 EALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ------------------------------------C
T ss_pred HHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 9999999999999999999999999999999999863
No 118
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.02 E-value=9.9e-11 Score=120.96 Aligned_cols=162 Identities=14% Similarity=0.076 Sum_probs=22.2
Q ss_pred CCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChhhhhcCCh
Q 016003 17 KPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSLALKQPV 96 (397)
Q Consensus 17 k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~~~~~~~V 96 (397)
.++++++++++|+.+|+++|.+++++.+||+|.++. .++++|+|+.+|++.. . ...+.+|
T Consensus 104 ~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~----------~g~lvGiVt~~Dl~~~--~--------~~~~~~V 163 (503)
T 1me8_A 104 VVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTP----------HGVLLGLVTQRDYPID--L--------TQTETKV 163 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCc----------CCeEEEEEEHHHHHhh--h--------ccccCcH
Confidence 357899999999999999999999999999996210 1689999999999864 1 1235789
Q ss_pred hhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHHHHHHHH
Q 016003 97 SVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFIL 175 (397)
Q Consensus 97 ~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~l~ 175 (397)
+++|... ..++++.+++++.+|++.|. +++++++|++++ ++.+|+||..||++.+.
T Consensus 164 ~diM~~~--~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~---------------------g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 164 SDMMTPF--SKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD---------------------QHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhCCC--CCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC---------------------CeEEEEEEecHHHHhhh
Confidence 9999631 23789999999999999999 789999988632 45789999999999875
Q ss_pred hccCCCCCCccCCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCc
Q 016003 176 SSISLFSPIPALSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGF 233 (397)
Q Consensus 176 ~~~~~l~~l~~~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~ 233 (397)
..... ...... ++. -..+.. ....+.++.|.++++ ..++|-..+|.
T Consensus 221 ~~~~~-----~d~~~~--l~v--~a~v~~-~~~~e~~~~l~e~gv--~~l~Vd~~~g~ 266 (503)
T 1me8_A 221 CHNEL-----VDSQKR--YLV--GAGINT-RDFRERVPALVEAGA--DVLCIDSSDGF 266 (503)
T ss_dssp -CCCC-----BCTTSC--BCC--EEEECS-SSHHHHHHHHHHHTC--SEEEECCSCCC
T ss_pred cccch-----hccccc--ccc--ccccCc-hhHHHHHHHHHhhhc--cceEEecccCc
Confidence 32111 011111 111 133445 667778999999999 76555333343
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.02 E-value=4.4e-09 Score=108.14 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=99.6
Q ss_pred hhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEc--cCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCC
Q 016003 9 EVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWD--CNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSL 86 (397)
Q Consensus 9 ~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d--~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~ 86 (397)
++.++|. ++++++++++|+.+|++.|.++++..+||+| . +++++|+|+.+|++.. .
T Consensus 91 ~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~-------------~~~lvGivt~~Dl~~~--~----- 148 (491)
T 1zfj_A 91 RSENGVI--IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLA-------------NRKLVGIITNRDMRFI--S----- 148 (491)
T ss_dssp HHTTTTS--SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTT-------------TCBEEEEEEHHHHHHC--S-----
T ss_pred hHHhcCc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCC-------------CCEEEEEEEHHHHhhh--c-----
Confidence 3567774 6789999999999999999999999999998 4 3689999999999853 1
Q ss_pred ChhhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeee
Q 016003 87 SPSLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWL 165 (397)
Q Consensus 87 ~~~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~II 165 (397)
..+.+++++|.. .+++++.+++++.++++.|. +++++++|++++ ++.+|+|
T Consensus 149 ----~~~~~v~~im~~---~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~---------------------g~lvGiv 200 (491)
T 1zfj_A 149 ----DYNAPISEHMTS---EHLVTAAVGTDLETAERILHEHRIEKLPLVDNS---------------------GRLSGLI 200 (491)
T ss_dssp ----CSSSBTTTSCCC---SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTT---------------------SBEEEEE
T ss_pred ----cCCCcHHHHcCC---CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCC---------------------CcEEEEE
Confidence 135689999964 13789999999999999999 899999998632 4678999
Q ss_pred cHHHHHHHHHh
Q 016003 166 TQEDIIRFILS 176 (397)
Q Consensus 166 Tq~DIi~~l~~ 176 (397)
|+.||++.+.+
T Consensus 201 t~~Dil~~~~~ 211 (491)
T 1zfj_A 201 TIKDIEKVIEF 211 (491)
T ss_dssp EHHHHHHHHHC
T ss_pred EHHHHHHHHhc
Confidence 99999999874
No 120
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.00 E-value=5.1e-10 Score=84.69 Aligned_cols=48 Identities=25% Similarity=0.278 Sum_probs=44.7
Q ss_pred cEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 343 AIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 343 ~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
++||+|++|+.+|+++|.+++++++||+|+ |+++||||.+||++.+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~-~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 689999999999999999999999999986 799999999999987643
No 121
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.90 E-value=6.2e-10 Score=114.68 Aligned_cols=117 Identities=18% Similarity=0.181 Sum_probs=5.6
Q ss_pred hhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChh
Q 016003 10 VSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPS 89 (397)
Q Consensus 10 v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~ 89 (397)
+.++|. ++++++++++|+.+|+++|.++++..+||+|. +++++|+|+..|+... .
T Consensus 97 ~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-------------~~~lvGivt~~Dl~~~--~-------- 151 (494)
T 1vrd_A 97 TENGII--YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE-------------EGRLVGLLTNRDVRFE--K-------- 151 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCc--cCCeEECCCCCHHHHHHHHHHcCceEEEEEcC-------------CCEEEEEEEHHHHHhh--c--------
Confidence 566673 57899999999999999999999999999996 3689999999999852 1
Q ss_pred hhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHH
Q 016003 90 LALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQE 168 (397)
Q Consensus 90 ~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~ 168 (397)
..+.+|+++|... .+++++.+++++.++++.|. +++++++|++++ ++.+|+||..
T Consensus 152 -~~~~~v~~im~~~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~---------------------g~lvGiIt~~ 207 (494)
T 1vrd_A 152 -NLSKKIKDLMTPR--EKLIVAPPDISLEKAKEILHQHRIEKLPLVSKD---------------------NKLVGLITIK 207 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CCCCcHHHHhCCC--CCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCC---------------------CeEEEEEEHH
Confidence 1356899999741 13889999999999999999 789999988632 4678999999
Q ss_pred HHHHHHH
Q 016003 169 DIIRFIL 175 (397)
Q Consensus 169 DIi~~l~ 175 (397)
|+++.+.
T Consensus 208 Dll~~~~ 214 (494)
T 1vrd_A 208 DIMSVIE 214 (494)
T ss_dssp -CHHHHT
T ss_pred HHHhhhc
Confidence 9999975
No 122
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.84 E-value=1.9e-09 Score=111.08 Aligned_cols=114 Identities=16% Similarity=0.207 Sum_probs=82.7
Q ss_pred hhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHHHHHHH
Q 016003 96 VSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFI 174 (397)
Q Consensus 96 V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~l 174 (397)
+.++|..+ ++++++++++.+++++|. +++.+++|.+++ ++++||||..|+. +
T Consensus 91 ~~~~m~~d----~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~---------------------~~lvGiVt~rDL~-~- 143 (496)
T 4fxs_A 91 FEAGVVTH----PVTVRPEQTIADVMELTHYHGFAGFPVVTEN---------------------NELVGIITGRDVR-F- 143 (496)
T ss_dssp CCC--CBC----CCCBCSSSBHHHHHHHHTSSCCCEEEEECSS---------------------SBEEEEEEHHHHT-T-
T ss_pred cccccccC----ceEECCCCCHHHHHHHHHHcCCcEEEEEccC---------------------CEEEEEEEHHHHh-h-
Confidence 35566544 788999999999999999 789999998632 4688999999985 1
Q ss_pred HhccCCCCCCccCCccccCCCC-c-CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcc
Q 016003 175 LSSISLFSPIPALSIDSLGIIS-T-DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCD 247 (397)
Q Consensus 175 ~~~~~~l~~l~~~ti~~L~~~~-~-~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~ 247 (397)
..-...++.+ +|+ + +++++++++++.+|+++|.++++ ..+||||++|+++|+||..||.+..
T Consensus 144 -------~~~~~~~v~d--iM~p~~~~vtv~~~~~l~ea~~~m~~~~i--~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 144 -------VTDLTKSVAA--VMTPKERLATVKEGATGAEVQEKMHKARV--EKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp -------CCCTTSBGGG--TSEEGGGCCEEECC----CGGGTCC---C--CCEEEECTTSBCCEEECCC-----C
T ss_pred -------cccCCCcHHH--HhcCCCCCEEECCCCCHHHHHHHHHHcCC--CEEEEEcCCCCEEEeehHhHHHHhh
Confidence 1123556766 788 5 59999999999999999999999 9999999999999999999998843
No 123
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.82 E-value=8.2e-09 Score=76.71 Aligned_cols=49 Identities=24% Similarity=0.280 Sum_probs=45.9
Q ss_pred ccEEeCCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 342 EAIVCHPTSSLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 342 ~~it~~~~~sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
+++++++++++.+++++|.+++++++||+|+ |+++|+||.+||++++..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 4689999999999999999999999999998 899999999999998754
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.79 E-value=2.7e-09 Score=109.81 Aligned_cols=117 Identities=15% Similarity=0.052 Sum_probs=2.1
Q ss_pred hhhhhhcCCCCeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCCh
Q 016003 9 EVSDLCLGKPALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSP 88 (397)
Q Consensus 9 ~v~dl~~~k~~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~ 88 (397)
++.++|. ++++++++++|+.+|+++|.+++++.+||+| + ++++|+|+.+|+...
T Consensus 89 ~~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~-------------g~lvGIVt~rDl~~~---------- 142 (490)
T 4avf_A 89 KHETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q-------------GELVGIVTGRDLRVK---------- 142 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C-------------CEEEEEEEhHHhhhc----------
Confidence 3556664 5678999999999999999999999999999 3 589999999998521
Q ss_pred hhhhcCChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecH
Q 016003 89 SLALKQPVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQ 167 (397)
Q Consensus 89 ~~~~~~~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq 167 (397)
...+.+|+++|.. ..+++++.+++++.+++++|. +++++++|++++ ++++|+||.
T Consensus 143 -~~~~~~V~~vMtp--~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~---------------------g~lvGiIT~ 198 (490)
T 4avf_A 143 -PNAGDTVAAIMTP--KDKLVTAREGTPLEEMKAKLYENRIEKMLVVDEN---------------------FYLRGLVTF 198 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -cccCCcHHHHhcc--CCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCC---------------------CcEEEEEeh
Confidence 1235689999962 124899999999999999999 789999988643 467889999
Q ss_pred HHHHHHHH
Q 016003 168 EDIIRFIL 175 (397)
Q Consensus 168 ~DIi~~l~ 175 (397)
.||++...
T Consensus 199 ~Dil~~~~ 206 (490)
T 4avf_A 199 RDIEKAKT 206 (490)
T ss_dssp --------
T ss_pred HHhhhhcc
Confidence 99998864
No 125
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.75 E-value=9.4e-10 Score=112.38 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=0.0
Q ss_pred CeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChhhhhcCChhh
Q 016003 19 ALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSLALKQPVSV 98 (397)
Q Consensus 19 ~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~~~~~~~V~~ 98 (397)
..+++.|+.||.+|+++|.+++|+.+||++... .+++++||||.+|+- | + ..+++|++
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~----------~~~kLvGIvT~RD~r-f--~---------d~~~~V~e 204 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGE----------PDSKLLGIVTGRDVQ-F--Q---------DAETPIKS 204 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccC----------cCCEEEEEEeccccc-c--c---------ccceEhhh
Confidence 468999999999999999999999999999522 147899999999963 3 1 12578999
Q ss_pred hccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHHHHHHH
Q 016003 99 LLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFI 174 (397)
Q Consensus 99 lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~l 174 (397)
+|... ++++..+.++.+|.++|. +++.++||++++ +.++|+||..|+.+.-
T Consensus 205 vMT~~----lvt~~~~~~leeA~~iL~~~kieklpVVd~~---------------------g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 205 VMTTE----VVTGSSPITLEKANSLLRETKKGKLPIVDSN---------------------GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred hcccc----eEEecCCCCHHHHHHHHHHccccceeEEccC---------------------CcEEEEEEechhhhhh
Confidence 99854 999999999999999999 788999888643 4577899999998764
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.64 E-value=1.8e-09 Score=111.69 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=66.8
Q ss_pred ChhhhccCCCCCceEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHHHHHH
Q 016003 95 PVSVLLPQLLPPLVMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRF 173 (397)
Q Consensus 95 ~V~~lm~~~~~~~~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~ 173 (397)
.+.++|... ++++.+++++.+|+++|. +++++++|++++. .+++.+||||..|+.+.
T Consensus 109 ~~~~im~~~----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~------------------~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 109 NFEQGFITD----PVVLSPSHTVGDVLEAKMRHGFSGIPITETGT------------------MGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp TCCTTSCSS----CCCCCC-----------------CEESCC--------------------------CCEECTTTTC--
T ss_pred hhhhccccC----CEEECCCCCHHHHHHHHHhcCCCEEEEEeCCC------------------cCCEEEEEEEHHHHHhh
Confidence 356777543 778999999999999999 7888888875321 02467899999998653
Q ss_pred HHhccCCCCCCccCCccccCCCCc--CeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcc
Q 016003 174 ILSSISLFSPIPALSIDSLGIIST--DVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCD 247 (397)
Q Consensus 174 l~~~~~~l~~l~~~ti~~L~~~~~--~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~ 247 (397)
. . .....++.+ +|++ +++++.+++++.+|+++|.++++ ..+||||++|+++|+||.+||.+..
T Consensus 167 ~-~------~~~~~~v~~--vm~~~~~~~tv~~~~~l~ea~~~m~~~~~--~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 167 A-E------KDHTTLLSE--VMTPRIELVVAPAGVTLKEANEILQRSKK--GKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp -----------------------CCBCCCCEETTCCSTTTTTHHHHHTC--SCCCEESSSSCCC----CCCCSSCC
T ss_pred h-h------ccCCCCHHH--HhCCCCCCeEECCCCCHHHHHHHHHHcCC--CcccEECCCCeEEEEEEHHHHHHHh
Confidence 1 0 112455655 7888 99999999999999999999999 9999999999999999999998743
No 127
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.64 E-value=6e-08 Score=71.93 Aligned_cols=66 Identities=9% Similarity=0.068 Sum_probs=55.3
Q ss_pred CeEEEeCChhHHHHHHHHhhCCCceEEEEccCCCCCCCCCCCCCCCeEEEEEehhHHHHHHhhcCCCCChhhhhcCChhh
Q 016003 19 ALRALSISAAIADALSALKNSDESFISVWDCNCCSNHRKLGDACECQCVGKVCMVDVICYLCKDSNSLSPSLALKQPVSV 98 (397)
Q Consensus 19 ~li~v~~~~tv~~Al~~L~~~~I~s~PV~d~~~~~~~~~~~~~~~~~~vGiv~~~Dil~~l~~~~~l~~~~~~~~~~V~~ 98 (397)
+++++++++|+.+|++.|.++++.++||+|. ++++|+|+..||+.++..... ...+.+|++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~--------------~~l~Givt~~dl~~~~~~~~~-----~~~~~~v~~ 61 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--------------DEILGVVTERDILDKVVAKGK-----NPKEVKVEE 61 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--------------TEEEEEEEHHHHHHHTTTTTC-----CGGGCBGGG
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--------------CEEEEEEEHHHHHHHHHHcCC-----CcccCCHHH
Confidence 4689999999999999999999999999994 589999999999998865321 134678999
Q ss_pred hccCC
Q 016003 99 LLPQL 103 (397)
Q Consensus 99 lm~~~ 103 (397)
+|...
T Consensus 62 im~~~ 66 (70)
T 3fio_A 62 IMTKN 66 (70)
T ss_dssp TCEEC
T ss_pred hcCCC
Confidence 99643
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.50 E-value=1.2e-08 Score=104.86 Aligned_cols=103 Identities=23% Similarity=0.278 Sum_probs=0.0
Q ss_pred eEEeCCCCCHHHHHHHHh-cCCceEEEeccCcchhhhhhhcccccccccCCCCceeeeecHHHHHHHHHhccCCCCCCcc
Q 016003 108 VMHVEPSCSLLEAMDLML-GGAQNLVVPIKNRLSIKRKQQQKLSSSSLTNHNGREFCWLTQEDIIRFILSSISLFSPIPA 186 (397)
Q Consensus 108 ~~~V~~~~sL~~al~~m~-~g~~r~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IITq~DIi~~l~~~~~~l~~l~~ 186 (397)
++++.+++++.++++.|. ++..+++|.++ ++++|+||..|++. . ..
T Consensus 103 ~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~----------------------~~lvGivt~~Dl~~---~--------~~ 149 (486)
T 2cu0_A 103 VITIAPDETVDFALFLMEKHGIDGLPVVED----------------------EKVVGIITKKDIAA---R--------EG 149 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEECCCCCHHHHHHHHHHcCCcEEEEEEC----------------------CEEEEEEEHHHhcc---C--------CC
Confidence 788999999999999998 67888888753 25678999999875 1 23
Q ss_pred CCccccCCCCcCeEEEeCCCcHHHHHHHHHhcCCCCCEEEEEcCCCcEEEeeccCcccCcc
Q 016003 187 LSIDSLGIISTDVVAVDYHSPASLALEAISRSLFDQTSVAVVDSDGFLIGEISPSTLGCCD 247 (397)
Q Consensus 187 ~ti~~L~~~~~~v~tv~~~~~~~~a~~~m~~~~i~~s~vpVVd~~g~lvG~is~~dl~~~~ 247 (397)
.++.+ +|+++++++++++++.++++.|.++++ ..+||||++|+++|+||.+||.+..
T Consensus 150 ~~v~~--im~~~~~~v~~~~~l~eal~~m~~~~~--~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 150 KLVKE--LMTKEVITVPESIEVEEALKIMIENRI--DRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp -------------------------------------------------------------
T ss_pred CCHHH--HccCCCeEECCcCcHHHHHHHHHHcCC--CEEEEEecCCeEEEEEEHHHHHHhh
Confidence 45655 788899999999999999999999999 9999999999999999999998843
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=57.28 E-value=17 Score=27.29 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCcEEEEEehHHHHHHHHH
Q 016003 364 VTYVWVIEDDCTLTGIVTFSDLLKVFRK 391 (397)
Q Consensus 364 i~rl~VVd~~~~lvGvVt~~DIl~~l~~ 391 (397)
...|-|||++|..+||++..+-|+...+
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAAR 40 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHH
Confidence 4557799999999999999999886543
No 130
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=38.36 E-value=13 Score=31.59 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=31.3
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCcEEEEEehHHHHH
Q 016003 351 SLMAVMIQAIAHRVTYVWVIEDDCTLTGIVTFSDLLK 387 (397)
Q Consensus 351 sl~~v~~~m~~~~i~rl~VVd~~~~lvGvVt~~DIl~ 387 (397)
.+.+.++.+.+.+-.-|+|..+ ++++|+|.+.|.+|
T Consensus 120 ~~~~~~~~la~~G~T~v~VA~d-~~l~GvIalaD~iK 155 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVVEG-SRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEEET-TEEEEEEEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEEEEC-CEEEEEEEEecCCC
Confidence 3788889999999999999975 79999999998764
No 131
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=24.05 E-value=37 Score=30.33 Aligned_cols=23 Identities=26% Similarity=0.108 Sum_probs=18.9
Q ss_pred cCCcEEEEEcCCCcEEEEEehHH
Q 016003 362 HRVTYVWVIEDDCTLTGIVTFSD 384 (397)
Q Consensus 362 ~~i~rl~VVd~~~~lvGvVt~~D 384 (397)
.+-..=||+|.+|+++||-|.+|
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC--
T ss_pred CCCCCCccCCCCCcEEEEEeccC
Confidence 47778899999999999999876
No 132
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=22.88 E-value=50 Score=26.26 Aligned_cols=16 Identities=19% Similarity=0.262 Sum_probs=13.6
Q ss_pred EEEEcCCCcEEEEEeh
Q 016003 367 VWVIEDDCTLTGIVTF 382 (397)
Q Consensus 367 l~VVd~~~~lvGvVt~ 382 (397)
.||.|++|+++|+|+-
T Consensus 106 ~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEECTTCCEEEEEEE
T ss_pred EeEECCCCCEEEEEEE
Confidence 5999878999999874
No 133
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=20.89 E-value=49 Score=29.42 Aligned_cols=21 Identities=19% Similarity=0.025 Sum_probs=17.6
Q ss_pred cCCcEEEEEcCCCcEEEEEeh
Q 016003 362 HRVTYVWVIEDDCTLTGIVTF 382 (397)
Q Consensus 362 ~~i~rl~VVd~~~~lvGvVt~ 382 (397)
.+-.+=|++|.+|+++||+|.
T Consensus 186 ~G~SGGPLv~~~G~vVGI~s~ 206 (231)
T 3tjo_A 186 YGNAGGPLVNLDGEVIGINTL 206 (231)
T ss_dssp TTTTTSEEECTTSCEEEEEEE
T ss_pred CCCchhHeecCCCeEEEEEeE
Confidence 366677999988999999985
Done!