BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016004
(397 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1
Complex
Length = 375
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 174/394 (44%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
R PI+ G + N D IW H F TE S + +++FE F
Sbjct: 68 RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N + +V+ +++ LY + R +V+D G TH P++ F++ +A+ R
Sbjct: 128 NVPAFYVS-IQAVLSLYSSGR---------TTGIVLDSGDGVTHVVPIYAGFSLPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
IDL G+ LT+YL +++S R + + E I+ D+KEKLC+V+LD +++Q A + +
Sbjct: 178 IDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTA---AQSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
+ +Y LPDG T G
Sbjct: 235 SIEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +F P+ LG+ AG+ + ++ C + LY +I+++
Sbjct: 252 -----NE------RFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP AER+++E+ L P +VKI E
Sbjct: 301 GGTTMFPGIAERMQKEITALAPSSMKVKIIAPPE 334
>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|I Chain I, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 174/394 (44%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 3 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
R PI+ G + N D IW H F TE S + +++FE F
Sbjct: 63 RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 122
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N + +V+ +++ LY + R +V+D G TH P++ F++ +A+ R
Sbjct: 123 NVPAFYVS-IQAVLSLYSSGR---------TTGIVLDSGDGVTHVVPIYAGFSLPHAILR 172
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
IDL G+ LT+YL +++S R + + E I+ D+KEKLC+V+LD +++Q A + +
Sbjct: 173 IDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTA---AQSS 229
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
+ +Y LPDG T G
Sbjct: 230 SIEKSYELPDGQVITIG------------------------------------------- 246
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +F P+ LG+ AG+ + ++ C + LY +I+++
Sbjct: 247 -----NE------RFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMS 295
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP AER+++E+ L P +VKI E
Sbjct: 296 GGTTMFPGIAERMQKEITALAPSSMKVKIIAPPE 329
>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|G Chain G, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 174/394 (44%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 3 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
R PI+ G + N D IW H F TE S + +++FE F
Sbjct: 63 RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 122
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N + +V+ +++ LY + R +V+D G TH P++ F++ +A+ R
Sbjct: 123 NVPAFYVS-IQAVLSLYSSGR---------TTGIVLDSGDGNTHVVPIYAGFSLPHAILR 172
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
IDL G+ LT+YL +++S R + + E I+ D+KEKLC+V+LD +++Q A + +
Sbjct: 173 IDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTA---AQSS 229
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
+ +Y LPDG T G
Sbjct: 230 SIEKSYELPDGQVITIG------------------------------------------- 246
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +F P+ LG+ AG+ + ++ C + LY +I+++
Sbjct: 247 -----NE------RFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMS 295
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP AER+++E+ L P +VKI E
Sbjct: 296 GGTTMFPGIAERMQKEITALAPSSMKVKIIAPPE 329
>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human
Gelsolin Segment 1
Length = 375
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 174/394 (44%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
R PI+ G + N D IW H F TE S + +++FE F
Sbjct: 68 RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N + +V+ +++ LY + R +V+D G TH P++ F++ +A+ R
Sbjct: 128 NVPAFYVS-IQAVLSLYSSGR---------TTGIVLDSGDGNTHVVPIYAGFSLPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
IDL G+ LT+YL +++S R + + E I+ D+KEKLC+V+LD +++Q A + +
Sbjct: 178 IDLAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTA---AQSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
+ +Y LPDG T G
Sbjct: 235 SIEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +F P+ LG+ AG+ + ++ C + LY +I+++
Sbjct: 252 -----NE------RFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP AER+++E+ L P +VKI E
Sbjct: 301 GGTTMFPGIAERMQKEITALAPSSMKVKIIAPPE 334
>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D
Length = 375
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 173/389 (44%), Gaps = 73/389 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + E I+ D+KEKLC+V+LD +++ A +
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKI 387
GG+T+FP A+R+++EL L P ++KI
Sbjct: 301 GGTTMFPGIADRMQKELTALAPSTMKIKI 329
>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex
With Gelsolin Segment 1
Length = 368
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 172/385 (44%), Gaps = 72/385 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVRRPI 64
+V+DNG G+ KAG G+ P P+ + RP + K + A S LT ++ PI
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGKDSYVGDEAQSKRGILT---LKYPI 64
Query: 65 DRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKS 124
+ G + N D IW H F TE + + +++FE FN +
Sbjct: 65 EXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 124
Query: 125 LFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLG 184
++VA +++ LY + R +V+D G +H P+++ + + +A+ R+DL
Sbjct: 125 MYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLA 174
Query: 185 GKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNLLRC 242
G+ LT+Y+ ++++ R + E I+ D+KEKL +V+LD ++Q A + L
Sbjct: 175 GRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTA---ASSSALEK 231
Query: 243 TYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRADLA 302
+Y LPDG T G
Sbjct: 232 SYELPDGQVITIG----------------------------------------------- 244
Query: 303 KNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGST 362
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+GG+T
Sbjct: 245 -NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 297
Query: 363 LFPRFAERLERELRPLVPDDYQVKI 387
+FP A+R+ +EL L P ++KI
Sbjct: 298 MFPGIADRMNKELTALAPSTMKIKI 322
>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin
With Gelsolin
Length = 375
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 172/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSXVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+Y+ ++++ R + E I+ D+KEKL +V+LD ++Q A +
Sbjct: 178 LDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP A+R+ +EL L P ++KI E
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 334
>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5O|C Chain C, Crystal Structure Of A Dictyostelium P109i Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 172/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + + +++FE F
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAILNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+Y+ ++++ R + I+ D+KEKL +V+LD ++Q A +
Sbjct: 178 LDLAGRDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP A+R+ +EL L P ++KI E
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 334
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 372
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 65 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 124
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 125 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 174
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 175 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 231
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 232 SSSSLEKSYELPDGQVITIG---------------------------------------- 251
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 252 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 297
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 298 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 329
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide
pdb|3M6G|B Chain B, Crystal Structure Of Actin In Complex With Lobophorolide
Length = 371
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 171/389 (43%), Gaps = 73/389 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V DNG GL+KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 128 NVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHAIMR 177
Query: 181 IDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A +
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 SLEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ +GM AG+ E ++ C + LY + +++
Sbjct: 252 -----NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKI 387
GG+T++P A+R+++E+ L P ++KI
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKI 329
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In
Complex With Skeletal Actin
pdb|1M8Q|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1H1V|A Chain A, Gelsolin G4-G6ACTIN COMPLEX
pdb|1RDW|X Chain X, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|A Chain A, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|B Chain B, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|2A5X|A Chain A, Crystal Structure Of A Cross-Linked Actin Dimer
pdb|2ASM|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
A
pdb|2ASP|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
C
pdb|2FF3|B Chain B, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|A Chain A, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
pdb|2Q1N|A Chain A, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q1N|B Chain B, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q31|A Chain A, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q31|B Chain B, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q36|A Chain A, Actin Dimer Cross-Linked Between Residues 191 And 374 And
Complexed With Kabiramide C
pdb|2Q0R|A Chain A, Structure Of Pectenotoxin-2 Bound To Actin
pdb|3BUZ|B Chain B, Crystal Structure Of Ia-Btad-Actin Complex
pdb|2Y83|O Chain O, Actin Filament Pointed End
pdb|2Y83|P Chain P, Actin Filament Pointed End
pdb|2Y83|Q Chain Q, Actin Filament Pointed End
pdb|2Y83|R Chain R, Actin Filament Pointed End
pdb|2Y83|S Chain S, Actin Filament Pointed End
pdb|2Y83|T Chain T, Actin Filament Pointed End
pdb|3TPQ|A Chain A, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|B Chain B, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|C Chain C, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|D Chain D, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|E Chain E, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3SJH|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp- Latrunculin A
pdb|3U8X|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U8X|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9Z|A Chain A, Crystal Structure Between Actin And A Protein Construct
Containing The First Beta-Thymosin Domain Of Drosophila
Ciboulot (Residues 2-58) With The Three Mutations
N26dQ27KD28S
pdb|3UE5|A Chain A, Ecp-Cleaved Actin In Complex With Spir Domain D
pdb|4GY2|B Chain B, Crystal Structure Of Apo-ia-actin Complex
pdb|4H0T|B Chain B, Crystal Structure Of Ia-adpr-actin Complex
pdb|4H0V|B Chain B, Crystal Structure Of Nad+-ia(e378s)-actin Complex
pdb|4H0X|B Chain B, Crystal Structure Of Nad+-ia(e380a)-actin Complex
pdb|4H0Y|B Chain B, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 375
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 65 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 124
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 125 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 174
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 175 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 231
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 232 SSSSLEKSYELPDGQVITIG---------------------------------------- 251
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 252 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 297
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 298 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 329
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1IJJ|B Chain B, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1P8Z|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
pdb|1SQK|A Chain A, Crystal Structure Of Ciboulot In Complex With Skeletal
Actin
pdb|1RGI|A Chain A, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
pdb|3CJB|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
pdb|3B5U|A Chain A, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|B Chain B, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|C Chain C, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|D Chain D, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|E Chain E, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|F Chain F, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|G Chain G, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|H Chain H, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|I Chain I, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|J Chain J, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|K Chain K, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|L Chain L, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|M Chain M, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|N Chain N, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3DAW|A Chain A, Structure Of The Actin-Depolymerizing Factor Homology
Domain In Complex With Actin
pdb|2V51|B Chain B, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V51|D Chain D, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V52|B Chain B, Structure Of Mal-Rpel2 Complexed To G-Actin
pdb|2VYP|A Chain A, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|2VYP|B Chain B, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|3FFK|B Chain B, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|E Chain E, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|2YJE|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|D Chain D, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|E Chain E, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|3TU5|A Chain A, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
pdb|4EAH|D Chain D, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|H Chain H, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|G Chain G, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|F Chain F, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
Length = 377
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 7 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 66
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 67 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 126
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 127 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 176
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 177 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 233
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 234 SSSSLEKSYELPDGQVITIG---------------------------------------- 253
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 254 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 299
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 300 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 331
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex
Length = 373
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 6 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 66 LTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 125
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 126 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 175
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 176 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 232
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 233 SSSSLEKSYELPDGQVITIG---------------------------------------- 252
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 253 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 298
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 299 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 370
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 172/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V DNG GL+KAG G+ P P+ + RP + + ++ S +
Sbjct: 3 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 63 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 123 NVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHAIMR 172
Query: 181 IDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A +
Sbjct: 173 LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---ASSS 229
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 230 SLEKSYELPDGQVITIG------------------------------------------- 246
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ +GM AG+ E ++ C + LY + +++
Sbjct: 247 -----NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 295
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 296 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 329
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|P Chain P, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Q Chain Q, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|R Chain R, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|S Chain S, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|T Chain T, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|U Chain U, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|V Chain V, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|W Chain W, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|X Chain X, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Y Chain Y, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Z Chain Z, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
Length = 376
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 6 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 66 LTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 125
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 126 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 175
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 176 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 232
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 233 SSSSLEKSYELPDGQVITIG---------------------------------------- 252
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 253 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 298
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 299 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C
pdb|1QZ6|A Chain A, Structure Of Rabbit Actin In Complex With Jaspisamide A
pdb|1S22|A Chain A, Absolute Stereochemistry Of Ulapualide A
pdb|1Y64|A Chain A, Bni1p Formin Homology 2 Domain Complexed With Atp-actin
pdb|1YXQ|A Chain A, Crystal Structure Of Actin In Complex With Swinholide A
pdb|1YXQ|B Chain B, Crystal Structure Of Actin In Complex With Swinholide A
pdb|2A3Z|A Chain A, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase
I
pdb|2A40|A Chain A, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A40|D Chain D, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A41|A Chain A, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase
I
pdb|2A42|A Chain A, Actin-Dnase I Complex
pdb|2ASO|A Chain A, Structure Of Rabbit Actin In Complex With Sphinxolide B
pdb|1WUA|A Chain A, The Structure Of Aplyronine A-Actin Complex
pdb|2FXU|A Chain A, X-Ray Structure Of Bistramide A- Actin Complex At 1.35 A
Resolution.
pdb|2D1K|A Chain A, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase
I
pdb|2HMP|A Chain A, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2HMP|B Chain B, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2Q0U|A Chain A, Structure Of Pectenotoxin-2 And Latrunculin B Bound To
Actin
pdb|1J6Z|A Chain A, Uncomplexed Actin
pdb|1LOT|B Chain B, Crystal Structure Of The Complex Of Actin With Vitamin
D-Binding Protein
pdb|1MA9|B Chain B, Crystal Structure Of The Complex Of Human Vitamin D
Binding Protein And Rabbit Muscle Actin
pdb|1NWK|A Chain A, Crystal Structure Of Monomeric Actin In The Atp State
pdb|2Q97|A Chain A, Complex Of Mammalian Actin With Toxofilin From Toxoplasma
Gondii
pdb|2PAV|A Chain A, Ternary Complex Of Profilin-Actin With The Last Poly-Pro
Of Human Vasp
pdb|2VCP|A Chain A, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2VCP|B Chain B, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2ZWH|A Chain A, Model For The F-Actin Structure
pdb|3HBT|A Chain A, The Structure Of Native G-Actin
pdb|3M3N|A Chain A, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M3N|B Chain B, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M1F|A Chain A, Crosslinked Complex Of Actin With First W Domain Of Vibrio
Parahaemolyticus Vopl
pdb|3MFP|A Chain A, Atomic Model Of F-Actin Based On A 6.6 Angstrom Resolution
Cryoem Map
pdb|4A7F|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7N|A Chain A, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|B Chain B, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|C Chain C, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|D Chain D, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|E Chain E, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4H03|B Chain B, Crystal Structure Of Nad+-ia-actin Complex
Length = 375
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 65 LTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 124
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 125 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 174
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 175 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 231
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 232 SSSSLEKSYELPDGQVITIG---------------------------------------- 251
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 252 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 297
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 298 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 329
>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin
And The Last Poly-Pro Of Human Vasp
pdb|3CIP|A Chain A, Complex Of Dictyostelium Discoideum Actin With Gelsolin
Length = 375
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 172/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+Y+ ++++ R + E I+ D+KEKL +V+LD ++Q A +
Sbjct: 178 LDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP A+R+ +EL L P ++KI E
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 334
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1V|B Chain B, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1Z|A Chain A, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|B Chain B, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|C Chain C, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|D Chain D, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|E Chain E, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|F Chain F, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
Length = 376
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 6 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 66 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 125
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 126 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 175
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 176 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 232
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 233 SSSSLEKSYELPDGQVITIG---------------------------------------- 252
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 253 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 298
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 299 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|H Chain H, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|J Chain J, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|K Chain K, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|N Chain N, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 172/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V DNG GL+KAG G+ P P+ + RP + + ++ S +
Sbjct: 3 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 63 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 123 NVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHAIMR 172
Query: 181 IDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A +
Sbjct: 173 LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---ASSS 229
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 230 SLEKSYELPDGQVITIG------------------------------------------- 246
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ +GM AG+ E ++ C + LY + +++
Sbjct: 247 -----NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 295
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 296 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 329
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form
pdb|2GWK|A Chain A, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
pdb|2GWK|B Chain B, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
Length = 371
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 173/397 (43%), Gaps = 73/397 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 1 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 60
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 61 LTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 120
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 121 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 170
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 171 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 227
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 228 SSSSLEKSYELPDGQVITIG---------------------------------------- 247
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 248 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 293
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
+++GG+T++P A+R+++E+ L P ++KI E
Sbjct: 294 VMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 330
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|A Chain A, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
pdb|1MDU|B Chain B, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|E Chain E, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|2PBD|A Chain A, Ternary Complex Of Profilin-Actin With The Poly-Pro-Gab
Domain Of Vasp
Length = 377
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 7 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 66
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 67 LTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 126
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 127 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 176
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 177 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 233
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 234 SSSSLEKSYELPDGQVITIG---------------------------------------- 253
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 254 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 299
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 300 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 331
>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin
Complexed With Human Gelsolin Segment 1 At 1.75 A
Resolution
Length = 375
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 171/389 (43%), Gaps = 73/389 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGVVLDSGDGVTHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + E I+ D+KEKLC+V+LD +++ A +
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 SLEKSYELPDGQVITVG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY + +L+
Sbjct: 252 -----NE------RFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKI 387
GG+T++P A+R+++E+ L P ++KI
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKI 329
>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5N|C Chain C, Crystal Structure Of A Dictyostelium P109a Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 171/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAALNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+Y+ ++++ R + I+ D+KEKL +V+LD ++Q A +
Sbjct: 178 LDLAGRDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP A+R+ +EL L P ++KI E
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 334
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
pdb|1LCU|B Chain B, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
Length = 371
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 173/397 (43%), Gaps = 73/397 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 1 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQGDSYVGDEAQSKRGI 60
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 61 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 120
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 121 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 170
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 171 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 227
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 228 SSSSLEKSYELPDGQVITIG---------------------------------------- 247
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 248 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 293
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
+++GG+T++P A+R+++E+ L P ++KI E
Sbjct: 294 VMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 330
>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|M Chain M, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 171/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 3 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 63 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 122
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 123 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVTHTVPIYEGYALPHAILR 172
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + E I+ D+KEKLC+V+LD +++ A +
Sbjct: 173 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSS 229
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 230 SLEKSYELPDGQVITIG------------------------------------------- 246
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM G+ E ++ C + LY + +L+
Sbjct: 247 -----NE------RFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 295
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 296 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 329
>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4
A
Length = 375
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 171/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVTHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + E I+ D+KEKLC+V+LD +++ A +
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 SLEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM G+ E ++ C + LY + +L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334
>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex
pdb|3LUE|A Chain A, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|B Chain B, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|C Chain C, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|D Chain D, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|E Chain E, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|F Chain F, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|G Chain G, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|H Chain H, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|I Chain I, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|J Chain J, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3J0S|A Chain A, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|B Chain B, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|C Chain C, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|D Chain D, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|E Chain E, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|F Chain F, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|G Chain G, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|H Chain H, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|I Chain I, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|J Chain J, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|K Chain K, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|L Chain L, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3UB5|A Chain A, Profilin:actin With A Wide Open Nucleotide Cleft
Length = 374
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 171/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 7 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 66
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 67 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 126
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 127 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVTHTVPIYEGYALPHAILR 176
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + E I+ D+KEKLC+V+LD +++ A +
Sbjct: 177 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSS 233
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 234 SLEKSYELPDGQVITIG------------------------------------------- 250
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM G+ E ++ C + LY + +L+
Sbjct: 251 -----NE------RFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 299
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 300 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 333
>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin
pdb|2OAN|B Chain B, Structure Of Oxidized Beta-Actin
pdb|2OAN|C Chain C, Structure Of Oxidized Beta-Actin
pdb|2OAN|D Chain D, Structure Of Oxidized Beta-Actin
Length = 375
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 171/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVTHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + E I+ D+KEKLC+V+LD +++ A +
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 SLEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM G+ E ++ C + LY + +L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESXGIHETTFNSIMKCDVDIRKDLYANTVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334
>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin
Complexed With Ca Atp And Human Gelsolin Segment 1
pdb|1NM1|A Chain A, Crystal Structure Of D. Dicsoideum Actin Complexed With
Gelsolin Segment 1 And Mg Atp At 1.8 A Resolution
pdb|1NMD|A Chain A, Crystal Structure Of D. Discoideum Actin-Gelsolin Segment
1 Complex Crystallized In Presence Of Lithium Atp
Length = 375
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 172/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+Y+ ++++ R + E I+ D+KEKL +V+LD +++ A +
Sbjct: 178 LDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP A+R+ +EL L P ++KI E
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 334
>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin
pdb|1HLU|A Chain A, Structure Of Bovine Beta-Actin-Profilin Complex With Actin
Bound Atp Phosphates Solvent Accessible
Length = 375
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 171/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVTHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + E I+ D+KEKLC+V+LD +++ A +
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 SLEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM G+ E ++ C + LY + +L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex
Length = 374
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 171/392 (43%), Gaps = 73/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL KAG G+ P P+ + RP + + ++ S
Sbjct: 4 TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 63
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 64 LTLKYPIEXGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 123
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 124 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 173
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 174 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 230
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 231 SSSSLEKSYELPDGQVITIG---------------------------------------- 250
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 251 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 296
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+L+GG+T++P A+R+++E+ L P ++KI
Sbjct: 297 VLSGGTTMYPGIADRMQKEITALAPSTMKIKI 328
>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA
Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN
Complex With Human Gelsolin Segment 1
Length = 375
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 173/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+Y+ ++++ R + E I+ D+KEKL +V+LD +++ + + +
Sbjct: 178 LDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYK---ESS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP A+R+ +EL L P ++KI E
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 334
>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment
1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT
228: Q228kT229AA230YE360H)
Length = 375
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 171/394 (43%), Gaps = 73/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + + ++ S +
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVMDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+Y+ ++++ R + E I+ D+KEKL +V+LD ++ + +
Sbjct: 178 LDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEM---KAYASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 235 ALEKSYELPDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM AG+ E ++ C + LY +++L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T+FP A+R+ +EL L P ++KI E
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPE 334
>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound
State
pdb|2HF4|A Chain A, Crystal Structure Of Monomeric Actin In Its Atp-Bound
State
pdb|3MN7|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN9|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MMV|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|F Chain F, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|K Chain K, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 374
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 170/389 (43%), Gaps = 73/389 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 7 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 66
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 67 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 126
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 127 NTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILR 176
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + +E I+ D+KEKLC+V+LD +++ A +
Sbjct: 177 LDLAGRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATA---ASSS 233
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y L DG T G
Sbjct: 234 SLEKSYELKDGQVITIG------------------------------------------- 250
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM G+ E ++ C + LY + +L+
Sbjct: 251 -----NE------RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 299
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKI 387
GG+T++P A+R+++E+ L P ++KI
Sbjct: 300 GGTTMYPGIADRMQKEITALAPSTMKIKI 328
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 171/389 (43%), Gaps = 74/389 (19%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V DNG GL+KAG G+ P P+ + RP + + ++ S +
Sbjct: 2 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 61
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 62 KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 120
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 121 NVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHAIMR 170
Query: 181 IDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A +
Sbjct: 171 LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---ASSS 227
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 228 SLEKSYELPDGQVITIG------------------------------------------- 244
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ +GM AG+ E ++ C + LY + +++
Sbjct: 245 -----NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 293
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKI 387
GG+T++P A+R+++E+ L P ++KI
Sbjct: 294 GGTTMYPGIADRMQKEITALAPSTMKIKI 322
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 74/392 (18%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA--- 58
+ +V DNG GL+KAG G+ P P+ + RP + + ++ S
Sbjct: 1 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 60
Query: 59 -AVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVF 117
++ PI+ G + N D IW H F TE + + +++F
Sbjct: 61 LTLKYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 119
Query: 118 EDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYA 177
E FN +++VA +++ LY + R +V+D G TH P+++ + + +A
Sbjct: 120 ETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHA 169
Query: 178 VKRIDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRG 235
+ R+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A
Sbjct: 170 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---A 226
Query: 236 KDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARD 295
+ L +Y LPDG T G
Sbjct: 227 SSSSLEKSYELPDGQVITIG---------------------------------------- 246
Query: 296 RKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESI 355
NE RF PE +FQP+ +GM AG+ E ++ C + LY +
Sbjct: 247 --------NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN 292
Query: 356 ILTGGSTLFPRFAERLERELRPLVPDDYQVKI 387
+++GG+T++P A+R+++E+ L P ++KI
Sbjct: 293 VMSGGTTMYPGIADRMQKEITALAPSTMKIKI 324
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 359
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 170/388 (43%), Gaps = 81/388 (20%)
Query: 2 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVR 61
+ +V DNG GL+KAG G+ P P+ + R A S LT ++
Sbjct: 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRV---------GDEAQSKRGILT---LK 52
Query: 62 RPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFN 121
PI+ G + N D IW H F TE + + +++FE FN
Sbjct: 53 YPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 112
Query: 122 FKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRI 181
+++VA +++ LY + R +V+D G TH P+++ + + +A+ R+
Sbjct: 113 VPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 162
Query: 182 DLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRGKDNL 239
DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A +
Sbjct: 163 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---ASSSS 219
Query: 240 LRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKRA 299
L +Y LPDG T G
Sbjct: 220 LEKSYELPDGQVITIG-------------------------------------------- 235
Query: 300 DLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTG 359
NE RF PE +FQP+ +GM AG+ E ++ C + LY + +++G
Sbjct: 236 ----NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 285
Query: 360 GSTLFPRFAERLERELRPLVPDDYQVKI 387
G+T++P A+R+++E+ L P ++KI
Sbjct: 286 GTTMYPGIADRMQKEITALAPSTMKIKI 313
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 364
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 172/394 (43%), Gaps = 74/394 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V DNG GL+KAG G+ P P+ + RP + + ++ S +
Sbjct: 3 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 63 KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 121
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G TH P+++ + + +A+ R
Sbjct: 122 NVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIYEGYALPHAIMR 171
Query: 181 IDLGGKALTNYLKELVSYRAINVMD--ETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + + E I+ D+KEKLC+V+LD ++ A +
Sbjct: 172 LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATA---ASSS 228
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y LPDG T G
Sbjct: 229 SLEKSYELPDGQVITIG------------------------------------------- 245
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ +GM AG+ E ++ C + LY + +++
Sbjct: 246 -----NE------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 294
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKITTQEE 392
GG+T++P A+R+++E+ L P ++KI E
Sbjct: 295 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 328
>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EKU|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EL2|A Chain A, Crystal Structure Of Monomeric Actin Bound To Ca-Atp
Length = 375
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 170/389 (43%), Gaps = 73/389 (18%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSA----AV 60
+V+DNG G+ KAG G+ P P+ + RP + + ++ S +
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 61 RRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDF 120
+ PI+ G + N D IW H F TE + + +++FE F
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
Query: 121 NFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKR 180
N +++VA +++ LY + R +V+D G +H P+++ + + +A+ R
Sbjct: 128 NTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILR 177
Query: 181 IDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARKRGKDN 238
+DL G+ LT+YL ++++ R + +E I+ D+KEKLC+V+LD +++ A +
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATA---ASSS 234
Query: 239 LLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEARDRKR 298
L +Y L DG T G
Sbjct: 235 SLEKSYELKDGQVITIG------------------------------------------- 251
Query: 299 ADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILT 358
NE RF PE +FQP+ LGM G+ E ++ C + LY + +L+
Sbjct: 252 -----NE------RFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 300
Query: 359 GGSTLFPRFAERLERELRPLVPDDYQVKI 387
GG+T++P A+R+++E+ L P ++KI
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKI 329
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
Length = 394
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 162/385 (42%), Gaps = 76/385 (19%)
Query: 3 NIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPL--SSKKF----IHPSPTAASATEDLT 56
+VV DNG G +K G+ G P P+ + RP+ S+ K I A+E +
Sbjct: 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPSLVGRPIIRSTTKVGNIEIKDLMVGDEASELRS 66
Query: 57 SAAVRRPIDRGYLINSDLQRDIWAHLFX-XXXXXXXXXXXXXXTEPLFALPSIQRATDEL 115
V P++ G + N D + +W + F TEP + E+
Sbjct: 67 MLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEV 126
Query: 116 VFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVN 175
+FE + F ++VA +++ LY GLL+ +VVD G TH PV++ F++
Sbjct: 127 MFETYQFSGVYVA-IQAVLTLYAQ-----GLLT----GVVVDSGDGVTHICPVYEGFSLP 176
Query: 176 YAVKRIDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARK 233
+ +R+D+ G+ +T YL +L+ R A N + + +KEKLC+V ++ ++ ++A
Sbjct: 177 HLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLAL- 235
Query: 234 RGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEA 293
+ +L +Y LPDG G G R + E +
Sbjct: 236 --ETTVLVESYTLPDGRIIKVG----------------GERFEAPEAL------------ 265
Query: 294 RDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYE 353
FQP + + G+AE + + + S Y+
Sbjct: 266 --------------------------FQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK 299
Query: 354 SIILTGGSTLFPRFAERLERELRPL 378
I+L+GGST++P RLEREL+ L
Sbjct: 300 HIVLSGGSTMYPGLPSRLERELKQL 324
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9L|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|B Chain B, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|B Chain B, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|B Chain B, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|B Chain B, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|B Chain B, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 394
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 161/385 (41%), Gaps = 76/385 (19%)
Query: 3 NIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPL--SSKKF----IHPSPTAASATEDLT 56
+VV DNG G +K G+ G P P + RP+ S+ K I A+E +
Sbjct: 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRS 66
Query: 57 SAAVRRPIDRGYLINSDLQRDIWAHLFX-XXXXXXXXXXXXXXTEPLFALPSIQRATDEL 115
V P++ G + N D + +W + F TEP + E+
Sbjct: 67 MLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEV 126
Query: 116 VFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVN 175
+FE + F ++VA +++ LY GLL+ +VVD G TH PV++ F++
Sbjct: 127 MFETYQFSGVYVA-IQAVLTLYAQ-----GLLT----GVVVDSGDGVTHICPVYEGFSLP 176
Query: 176 YAVKRIDLGGKALTNYLKELVSYR--AINVMDETFIIDDVKEKLCFVSLDVARDLQIARK 233
+ +R+D+ G+ +T YL +L+ R A N + + +KEKLC+V ++ ++ ++A
Sbjct: 177 HLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLAL- 235
Query: 234 RGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEA 293
+ +L +Y LPDG G G R + E +
Sbjct: 236 --ETTVLVESYTLPDGRIIKVG----------------GERFEAPEAL------------ 265
Query: 294 RDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYE 353
FQP + + G+AE + + + S Y+
Sbjct: 266 --------------------------FQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK 299
Query: 354 SIILTGGSTLFPRFAERLERELRPL 378
I+L+GGST++P RLEREL+ L
Sbjct: 300 HIVLSGGSTMYPGLPSRLERELKQL 324
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9K|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
pdb|2P9L|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|A Chain A, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|A Chain A, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|A Chain A, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|A Chain A, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|A Chain A, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 418
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 163/400 (40%), Gaps = 71/400 (17%)
Query: 6 VLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLT--------- 56
V+D G G K G+ G +P IP+C+ S+K +DL
Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIE 68
Query: 57 --SAAVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDE 114
+ A + PI G + + DL + TEP P + T E
Sbjct: 69 KPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAE 128
Query: 115 LVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTV 174
++FE FN L++A L + R G T V+D G TH PV + + +
Sbjct: 129 IMFESFNVPGLYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVAEGYVI 186
Query: 175 NYAVKRIDLGGKALTNYLKELVSYRAINVMDETFIIDDVKEKLCFVSLDVARDLQIARKR 234
+K I + G+ +T ++++L+ R + + E SL+ A+ ++
Sbjct: 187 GSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQ-------------SLETAKAVK----- 228
Query: 235 GKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSRSQPSETVKDMDRTEVMEEAR 294
R +YV PD V K F K +++ G +
Sbjct: 229 -----ERYSYVCPDLV---KEFNKYDTDGSKWIKQYTGINA------------------- 261
Query: 295 DRKRADLAKNEF--DLTNERFLVPEMIFQP--ADLGMNQAGLAECIVRAVNSCHPYLHSV 350
++K EF D+ ERFL PE+ F P A+ Q ++E + + +C +
Sbjct: 262 ------ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQP-ISEVVDEVIQNCPIDVRRP 314
Query: 351 LYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQ 390
LY++I+L+GGST+F F RL+R+L+ V D ++K++ +
Sbjct: 315 LYKNIVLSGGSTMFRDFGRRLQRDLKRTV--DARLKLSEE 352
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
pdb|3DWL|B Chain B, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
Length = 427
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 156/406 (38%), Gaps = 90/406 (22%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCM--------------YRP--LSSKKFIHPSPTA 48
+++DNG G K G+ G P+ P + +P ++SK H S +
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLS--S 65
Query: 49 ASATEDL-------------TSAAVRRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXX 95
ATEDL ++ PI G + N D W
Sbjct: 66 KRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHY 125
Query: 96 XXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLV 155
TEP P + T E++FE FN L++A V AS + + V
Sbjct: 126 FLLTEPPLNPPENRENTAEIMFESFNCAGLYIAV--QAVLALAASWTSSKVTDRSLTGTV 183
Query: 156 VDCGFSFTHAAPVFQNFTVNYAVKRIDLGGKALTNYLKELVSYRAINVMDETF-IIDDVK 214
VD G TH PV + + + ++K + L G+ +T +++ L+ R N D + + +K
Sbjct: 184 VDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLL--RDRNEPDSSLKTAERIK 241
Query: 215 EKLCFVSLDVARDLQIARKRGKDNLLRCTYVLPDGVTHTKGFVKDPDAAQRYLSLSDGSR 274
E+ C YV PD V F ++PD RYL + S
Sbjct: 242 EECC-------------------------YVCPDIVKEFSRFDREPD---RYLKYASESI 273
Query: 275 SQPSETVKDMDRTEVMEEARDRKRADLAKNEFDLTNERFLVPEMIFQPADLGMN-QAGLA 333
+ S T+ D+ ERFL PE+ F P + L
Sbjct: 274 TGHSTTI-------------------------DVGFERFLAPEIFFNPEIASSDFLTPLP 308
Query: 334 ECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFAERLERELRPLV 379
E + V S + LY++I+L+GGSTLF F RL+R+L+ +V
Sbjct: 309 ELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIV 354
>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|B Chain B, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|C Chain C, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|D Chain D, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
Length = 498
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 162/432 (37%), Gaps = 71/432 (16%)
Query: 5 VVLDNGGGLIKAGHGGERDPAVTIPNCM--YRPLSSKKFIHPSPTAASATEDLTSAAVRR 62
VV+D G G+ G P +P+ Y K I + +D +
Sbjct: 26 VVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPI-- 83
Query: 63 PIDRGYLINSDLQRDIWAH-LFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFN 121
I+ G +I+ D ++ W L TEP++ ++ + E++ E
Sbjct: 84 -IENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQ 142
Query: 122 FKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRI 181
F++ ++A + V A+ RP C LVVD G +P+ T++ + +R
Sbjct: 143 FEACYLAPTSTCVSF--AAGRP-------NC-LVVDIGHDTCSVSPIVDGMTLSKSTRRN 192
Query: 182 DLGGKALTNYLK------ELVSYRAINVMDETFI---------------------IDDVK 214
+ GK + + +K E++ AI FI + K
Sbjct: 193 FIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252
Query: 215 EKLCFV----SLDVAR-DLQIARKRGKDNLLRCTYVLPDGVTHTKGFV------KDPDAA 263
E LC + +L+ + +L KR ++ V + + GF K+ D
Sbjct: 253 ETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRY--GFAEELFLPKEDDIP 310
Query: 264 QRYLSLSDG------------SRSQPS---ETVKDMDRTEVMEEARDRKRADLAKNEFDL 308
+ + G R++PS ++ K + TE E+ K A N D
Sbjct: 311 ANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADT 370
Query: 309 TNERFLVPEMIFQPADLGMNQAGLAECIVRAVNSCHPYLHSVLYESIILTGGSTLFPRFA 368
NE P +P GLA+ + ++ S L + L +++LTGG++ P +
Sbjct: 371 PNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLS 430
Query: 369 ERLERELRPLVP 380
+RL EL ++P
Sbjct: 431 DRLMTELNKILP 442
>pdb|4I6M|B Chain B, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of
Swi/snf Chromatin Remodeler
Length = 439
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 24 PAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVRRPIDRGYLIN----SDLQRDIW 79
P + IP +YR S T S +D A + +PI G +I+ + R I+
Sbjct: 33 PELEIPTQIYRTTRQDG----SYTYHSTNKD-NKAELIKPIQNGEIIDISAFTQFLRLIF 87
Query: 80 AHLFXXXXXXXXXXXXXXXTE-PLFALPSIQRATDEL-VFEDFNFKSLFVADPPSLVHLY 137
+ + PL + + +L + + F+SL + + L+ L
Sbjct: 88 VSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINN---LIQLP 144
Query: 138 EASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLGGKALTNYLKELV 196
+ Y +S C ++D G T P+ +++ V I GG+++ + LK+L+
Sbjct: 145 ASLAATYSXISLQNCC-IIDVGTHHTDIIPIVDYAQLDHLVSSIPXGGQSINDSLKKLL 202
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,380,918
Number of Sequences: 62578
Number of extensions: 446422
Number of successful extensions: 1281
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1068
Number of HSP's gapped (non-prelim): 90
length of query: 397
length of database: 14,973,337
effective HSP length: 101
effective length of query: 296
effective length of database: 8,652,959
effective search space: 2561275864
effective search space used: 2561275864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)