Query 016006
Match_columns 397
No_of_seqs 170 out of 746
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 06:17:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016006.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016006hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oc9_A UDP-N-acetylglucosamine 100.0 1E-105 4E-110 806.1 33.6 376 5-395 21-404 (405)
2 2yqc_A UDP-N-acetylglucosamine 100.0 2.5E-96 9E-101 758.9 32.2 384 2-395 86-486 (486)
3 1jv1_A Glcnac1P uridyltransfer 100.0 5.7E-93 2E-97 736.4 36.2 386 2-395 85-492 (505)
4 3ogz_A UDP-sugar pyrophosphory 100.0 1.3E-79 4.4E-84 639.6 26.3 334 2-357 99-476 (630)
5 3gue_A UTP-glucose-1-phosphate 100.0 4E-79 1.4E-83 622.8 22.5 299 10-328 69-380 (484)
6 3r3i_A UTP--glucose-1-phosphat 100.0 5.2E-78 1.8E-82 618.6 14.5 312 7-356 115-436 (528)
7 2oeg_A UTP-glucose-1-phosphate 100.0 3.1E-74 1.1E-78 593.9 13.8 332 10-372 68-419 (505)
8 2i5k_A UTP--glucose-1-phosphat 100.0 8.4E-70 2.9E-74 561.0 20.0 339 14-395 87-433 (488)
9 2icy_A Probable UTP-glucose-1- 100.0 7.4E-69 2.5E-73 551.2 21.0 332 6-383 68-403 (469)
10 3st8_A Bifunctional protein GL 99.7 1.1E-16 3.6E-21 165.8 15.8 256 18-357 11-273 (501)
11 3oam_A 3-deoxy-manno-octuloson 99.3 1.9E-11 6.7E-16 115.3 12.0 188 19-268 2-197 (252)
12 4ecm_A Glucose-1-phosphate thy 99.2 2.3E-10 7.7E-15 108.7 16.5 182 17-266 22-206 (269)
13 1fxo_A Glucose-1-phosphate thy 99.1 1.2E-09 4.1E-14 105.4 16.5 183 19-267 2-187 (293)
14 1mc3_A Glucose-1-phosphate thy 99.1 8.2E-10 2.8E-14 106.8 15.2 181 20-266 4-187 (296)
15 1lvw_A Glucose-1-phosphate thy 99.1 3.3E-09 1.1E-13 102.5 17.3 183 19-267 3-188 (295)
16 3juk_A UDP-glucose pyrophospho 99.1 1.2E-09 4.2E-14 104.0 13.5 183 20-266 3-217 (281)
17 4fce_A Bifunctional protein GL 99.0 6.4E-09 2.2E-13 105.3 17.8 182 18-269 7-189 (459)
18 3pnn_A Conserved domain protei 99.0 3E-09 1E-13 103.0 14.1 208 19-267 5-229 (303)
19 3k8d_A 3-deoxy-manno-octuloson 99.0 1.6E-09 5.4E-14 103.3 11.8 188 19-268 18-213 (264)
20 1hm9_A GLMU, UDP-N-acetylgluco 99.0 1.8E-08 6.1E-13 102.5 18.9 181 21-268 13-194 (468)
21 2v0h_A Bifunctional protein GL 99.0 2.3E-08 7.7E-13 101.2 19.2 181 18-268 4-185 (456)
22 3tqd_A 3-deoxy-manno-octuloson 98.9 2.1E-09 7.2E-14 102.0 9.9 187 19-268 9-206 (256)
23 3brk_X Glucose-1-phosphate ade 98.9 1.1E-08 3.9E-13 102.9 15.8 198 19-268 12-221 (420)
24 4evw_A Nucleoside-diphosphate- 98.9 1.6E-09 5.6E-14 102.4 8.8 172 22-261 2-180 (255)
25 2qh5_A PMI, ALGA, mannose-6-ph 98.9 1E-08 3.4E-13 99.4 13.9 191 19-268 4-203 (308)
26 1tzf_A Glucose-1-phosphate cyt 98.9 5.9E-09 2E-13 97.5 11.7 191 20-264 3-200 (259)
27 1yp2_A Glucose-1-phosphate ade 98.9 9.2E-09 3.1E-13 104.4 11.7 211 19-268 20-245 (451)
28 2e3d_A UTP--glucose-1-phosphat 98.8 5.5E-08 1.9E-12 93.5 13.2 184 19-266 8-228 (302)
29 2pa4_A UTP-glucose-1-phosphate 98.8 2.5E-08 8.6E-13 97.2 10.9 186 20-266 13-228 (323)
30 1h7e_A 3-deoxy-manno-octuloson 98.7 1.1E-07 3.8E-12 88.2 13.8 179 19-267 2-187 (245)
31 4fcu_A 3-deoxy-manno-octuloson 98.7 8.3E-08 2.9E-12 90.7 12.7 184 20-268 2-198 (253)
32 2y6p_A 3-deoxy-manno-octuloson 98.7 1.5E-07 5E-12 86.6 13.7 177 19-268 2-182 (234)
33 2ux8_A Glucose-1-phosphate uri 98.7 4E-08 1.4E-12 94.4 10.0 186 18-266 13-226 (297)
34 1jyk_A LICC protein, CTP:phosp 98.7 7.2E-08 2.5E-12 90.8 9.6 168 19-268 25-195 (254)
35 2x65_A Mannose-1-phosphate gua 98.6 1.3E-07 4.3E-12 93.0 11.4 192 20-268 2-205 (336)
36 1vic_A 3-deoxy-manno-octuloson 98.6 4.3E-07 1.5E-11 85.4 14.6 186 19-267 2-200 (262)
37 1ezi_A CMP-N-acetylneuraminic 98.5 7.5E-07 2.6E-11 81.8 12.0 183 19-266 4-189 (228)
38 2cu2_A Putative mannose-1-phos 98.4 6.6E-07 2.3E-11 87.9 10.1 189 19-268 2-202 (337)
39 3f1c_A Putative 2-C-methyl-D-e 98.4 1.2E-06 4.2E-11 81.7 10.9 124 19-195 3-135 (246)
40 1qwj_A Cytidine monophospho-N- 98.4 2.2E-06 7.5E-11 79.0 11.5 134 19-208 3-138 (229)
41 2xwl_A 2-C-methyl-D-erythritol 98.3 2.2E-06 7.6E-11 77.9 10.2 41 19-62 2-42 (223)
42 3q80_A 2-C-methyl-D-erythritol 98.3 4.2E-06 1.5E-10 77.9 11.8 168 18-269 6-180 (231)
43 2ggo_A 401AA long hypothetical 98.3 6E-06 2E-10 82.1 13.4 167 21-266 2-171 (401)
44 2vsh_A TARI, 2-C-methyl-D-eryt 98.3 2.8E-06 9.6E-11 77.8 10.0 65 20-102 3-68 (236)
45 2xme_A CTP-inositol-1-phosphat 98.3 1E-05 3.6E-10 74.3 13.6 39 19-61 18-56 (232)
46 1vgw_A 4-diphosphocytidyl-2C-m 98.2 2.5E-06 8.4E-11 78.1 8.5 41 18-61 5-45 (231)
47 2waw_A MOBA relate protein; un 98.2 5.2E-06 1.8E-10 73.9 10.2 104 19-179 5-109 (199)
48 3rsb_A Adenosylcobinamide-phos 98.2 1.8E-06 6.1E-11 77.2 6.8 61 21-102 2-62 (196)
49 2wee_A MOBA-related protein; u 98.2 4.6E-06 1.6E-10 74.2 8.3 39 19-62 5-43 (197)
50 3d5n_A Q97W15_sulso; NESG, SSR 98.1 3.6E-06 1.2E-10 75.9 7.5 38 19-61 2-39 (197)
51 1vpa_A 2-C-methyl-D-erythritol 98.1 4.2E-06 1.4E-10 76.8 8.0 40 19-61 13-52 (234)
52 1i52_A 4-diphosphocytidyl-2-C- 98.1 5.4E-06 1.9E-10 76.4 7.1 40 19-61 7-46 (236)
53 3ngw_A Molybdopterin-guanine d 97.9 5.7E-05 2E-09 69.0 10.9 37 20-61 1-37 (208)
54 2dpw_A Hypothetical protein TT 97.9 1.9E-05 6.6E-10 72.8 7.6 39 19-61 2-43 (232)
55 2yc3_A 2-C-methyl-D-erythritol 97.8 1.7E-05 5.7E-10 72.5 5.6 40 19-61 4-43 (228)
56 1w55_A ISPD/ISPF bifunctional 97.7 6.2E-05 2.1E-09 74.9 7.9 40 19-61 3-42 (371)
57 2e8b_A Probable molybdopterin- 97.6 5.2E-05 1.8E-09 68.4 5.6 38 19-61 14-51 (201)
58 2px7_A 2-C-methyl-D-erythritol 97.5 4.4E-05 1.5E-09 70.6 3.7 41 15-59 21-61 (236)
59 1e5k_A Molybdopterin-guanine d 97.4 8.7E-05 3E-09 67.0 4.4 39 19-61 6-44 (201)
No 1
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=1.1e-105 Score=806.11 Aligned_cols=376 Identities=35% Similarity=0.595 Sum_probs=353.8
Q ss_pred HHHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeE
Q 016006 5 ERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHW 84 (397)
Q Consensus 5 ~~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl 84 (397)
++|+++|+++|++||||||+||||+|||||++.||+|+||+++++|||||+++++|+++|+++.++.. + .++.|||
T Consensus 21 ~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~--~--~~~~Ip~ 96 (405)
T 3oc9_A 21 KEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSH--Q--KNVMIHW 96 (405)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHC--C--SCCCCEE
T ss_pred HHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhcc--c--cCCCCCE
Confidence 58999999999999999999999999999999999999999999999999999999999999876421 1 3577999
Q ss_pred EEecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHC
Q 016006 85 YIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATR 164 (397)
Q Consensus 85 ~IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~ 164 (397)
+||||++||+.|++||++|+|||+++++|++|.|+++||++.+|+++++++++++|+|+||||+|.+|+++|+|++|.++
T Consensus 97 ~IMtS~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~ 176 (405)
T 3oc9_A 97 FLMTNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEK 176 (405)
T ss_dssp EEEECTTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHH
T ss_pred EEEeCCccHHHHHHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCC
Q 016006 165 GIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETG 244 (397)
Q Consensus 165 G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g 244 (397)
|++|+||+|+||+|++++||.|+|||++++++++++|++|+.|+|++|+||+. +|+++||||+|+|++ ++.. ..+|
T Consensus 177 Gieyi~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~--dg~~~vvEysei~~e-~e~~-~~~g 252 (405)
T 3oc9_A 177 GIKYSVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKE--QERIKVVEYTELTDE-LNKQ-LSNG 252 (405)
T ss_dssp TCCEEEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGCCTT-TTCB-CTTS
T ss_pred CCEEEEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEE--CCeeEEEEEeeCCHH-Hhhc-CCCC
Confidence 99999999999988999999999999999999999999999999999999997 799999999999999 5443 3578
Q ss_pred ceeeeccceeeeEeehHHHHHHhhccccCccceeeccccCCCCC--------CcchhhhhHHHhhhcccCCceeEEEEec
Q 016006 245 RLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHG--------QTVGFKLEQFIFDAFPYAPSTALFEVLR 316 (397)
Q Consensus 245 ~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~--------~~~~~klE~fi~D~~~~~~~~~~~~v~R 316 (397)
.+.|+++|||+|+|+++||++++ +.+||||+|+|||||.|. .+||+|||+||||+|++++++.+++|+|
T Consensus 253 ~l~fn~~Ni~~h~fs~~fL~~i~---~~~l~~h~a~Kkip~~d~~g~~~~p~~~ngiklE~fifd~f~~~~~~~~~eV~R 329 (405)
T 3oc9_A 253 EFIYNCGHISINGYSTSFLEKAA---EYQLPYHIAKKKVPFVNEQGIVIHPSENNGIKKEIFFFDVFPLATKVSIFEIQR 329 (405)
T ss_dssp CBSSCEEEEEEEEEEHHHHHHHT---TCCCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSCEEEEECCH
T ss_pred ceeeccceeEeeecCHHHHHHhh---hccCCcEEeccccCccCCCCCCcccCCcceeehHHHHHHHHHhccceEEEEECh
Confidence 89999999999999999999988 357999999999999862 3799999999999999999999999999
Q ss_pred CccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeecCCCCCCCcEEeCcccceeCCcchhhhcCcEecCCccc
Q 016006 317 EEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 395 (397)
Q Consensus 317 ~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~eisp~~sy~gE~l~~~~~~~~~~~p~~~ 395 (397)
++||+||||++|.+.|||+|||++|+++|++|++++|+++.++.+ ..|||||++||+||||+. ++|++|+.|.++
T Consensus 330 ~~eF~PlKn~~g~~~dsp~tar~~l~~~~~~wl~~ag~~~~~~~~---~~~Eispl~sy~ge~l~~-~~~~~~~~p~~~ 404 (405)
T 3oc9_A 330 FIEFSALKNSLNESFDNVNTVKRDWYRLNIYYLKKAGAIVDDSKS---PICEISFRKSFEEEGLKE-FKGKTIQLPFIL 404 (405)
T ss_dssp HHHCCBCCCCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEEECSSC---CCEEECTTTCSSSGGGGG-GTTCEEESCEEE
T ss_pred HhcccceecCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEcCCCC---ccEEeCcccccCccCccc-cCCcEecCcccc
Confidence 999999999999999999999999999999999999999875432 369999999999999998 699999999875
No 2
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=2.5e-96 Score=758.88 Aligned_cols=384 Identities=45% Similarity=0.756 Sum_probs=354.9
Q ss_pred hHHHHHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcc
Q 016006 2 DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAA 81 (397)
Q Consensus 2 ~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ 81 (397)
++..+|++.|+++|++||+++|+||||+|||||++.||+|+||+++++|||||+++++|+++++++.+.++ ....+.
T Consensus 86 ~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G---~~~~~~ 162 (486)
T 2yqc_A 86 DILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLK---STKKPI 162 (486)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHT---CSSCCC
T ss_pred HHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcC---CCcCCc
Confidence 45678999999999999999999999999999999999999999999999999999999999998865542 113578
Q ss_pred eeEEEecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCC-cccccCCCccccccCCCchHhHHHhhCchHHH
Q 016006 82 IHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSKLLED 160 (397)
Q Consensus 82 ipl~IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g-~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~ 160 (397)
|||+||||++||+.|++||++|+|||+++++|+||+|+++||++.+| +++++++++++|+|+||||+|.+|+++|+|++
T Consensus 163 ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~ 242 (486)
T 2yqc_A 163 INWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDD 242 (486)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHH
T ss_pred cCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHCCceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhcc
Q 016006 161 MATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAIN 240 (397)
Q Consensus 161 l~~~G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~ 240 (397)
|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|+.|+|++|++|++..+|+++|+||+|++++.++.++
T Consensus 243 l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~ 322 (486)
T 2yqc_A 243 LNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKD 322 (486)
T ss_dssp HHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEE
T ss_pred HHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999998733689999999999999887654
Q ss_pred CCC--CceeeeccceeeeEeehHHHHHHhhccccC---ccceeeccccCCCCC---------CcchhhhhHHHhhhcccC
Q 016006 241 QET--GRLRFCWSNVCLHMFTLDFLNQVANGLEKD---SVYHLAEKKIPSIHG---------QTVGFKLEQFIFDAFPYA 306 (397)
Q Consensus 241 ~~~--g~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~---lp~h~a~kkip~~~~---------~~~~~klE~fi~D~~~~~ 306 (397)
. + |.+.|+++|||+|||++++|++++...... +|||++.|||||+|. .+||+|||+||||+|+++
T Consensus 323 ~-~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~~~~~~~~lp~~v~~Kki~~~d~~~g~~~~p~~pn~~klE~~~~d~~~~~ 401 (486)
T 2yqc_A 323 P-QDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFPSV 401 (486)
T ss_dssp T-TEEEEESSCEEEEEEEEEEHHHHHHHHHHHTTCTTTSCCEEEEECCCEECTTTCCEECCSSCCEEEEECCGGGGGGGS
T ss_pred c-cccccccccceeEEEEEEeHHHHHHHHHhhcCcccCCcceEeccccCccccccCeeccCCCCCeeeeeehHhhHHhhc
Confidence 2 3 678899999999999999999966544456 999999999998772 368999999999999999
Q ss_pred C--ceeEEEEecCccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeecCCCCCCCcEEeCcccceeCCcchhhh
Q 016006 307 P--STALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAIC 384 (397)
Q Consensus 307 ~--~~~~~~v~R~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~eisp~~sy~gE~l~~~~ 384 (397)
+ ++.+++|+|++||+||||++|.+.|||+|||++|+++|++||++||+.+.++ .+|||||++||+||||+ ++
T Consensus 402 ~l~~~~~~~V~R~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~aG~~~~~~-----~~~eisp~~sy~ge~l~-~~ 475 (486)
T 2yqc_A 402 ELNKFGCLEVDRLDEFSPLKNADGAKNDTPTTCRNHYLERSSKWVIQNGGVIDNQ-----GLVEVDSKTSYGGEGLE-FV 475 (486)
T ss_dssp CGGGEEEEEECHHHHCCBCCSCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEECTT-----CCCBCCTTTCSSSTTCG-GG
T ss_pred ccCceEEEEECcccceeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCeecCC-----CcEEEcceeeECCCCch-hh
Confidence 9 9999999999999999999998899999999999999999999999998532 36999999999999999 67
Q ss_pred cCcEecCCccc
Q 016006 385 RGRTFHAPCEI 395 (397)
Q Consensus 385 ~~~~~~~p~~~ 395 (397)
+||+|+.|.+|
T Consensus 476 ~~~~~~~~~~~ 486 (486)
T 2yqc_A 476 NGKHFKNGDII 486 (486)
T ss_dssp TTCEECTTCBC
T ss_pred cCccccCCccC
Confidence 99999999875
No 3
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=5.7e-93 Score=736.40 Aligned_cols=386 Identities=49% Similarity=0.802 Sum_probs=357.7
Q ss_pred hHHHHHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcc
Q 016006 2 DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAA 81 (397)
Q Consensus 2 ~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ 81 (397)
++..+|+++|+++|+.||+++|+||||+|||||++.||+|+||+++++|||||+++++|+++|+++.+..+ ..+.
T Consensus 85 ~~~~~~~~~Gl~~i~~~kvavViLAGG~GTRLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G-----~~~~ 159 (505)
T 1jv1_A 85 DQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG-----NKCI 159 (505)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS-----SCCC
T ss_pred HHHHHHHHHhHHhhccCceEEEEEcCCccccCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcC-----CCcc
Confidence 56789999999999999999999999999999999999999999999999999999999999999866542 2377
Q ss_pred eeEEEecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHH
Q 016006 82 IHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDM 161 (397)
Q Consensus 82 ipl~IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l 161 (397)
|||+||||++|++.|++||++|+|||+++++|++|.|+++||++.+|+++++++++++++|+||||+|.+|.++|++++|
T Consensus 160 ip~vImtS~~t~e~t~~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l 239 (505)
T 1jv1_A 160 IPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDM 239 (505)
T ss_dssp CCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHH
T ss_pred ceEEEEecCCCHHHHHHHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccC
Q 016006 162 ATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQ 241 (397)
Q Consensus 162 ~~~G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~ 241 (397)
.++|++|++|+|+||+|++++||.|+|||..++++++++|++|+.+++++|+||.+ +|+++|+||+|+|++.++.++
T Consensus 240 ~~~g~e~~~V~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~--dg~~~vvEy~E~p~~~~~~~~- 316 (505)
T 1jv1_A 240 EQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATAQKRS- 316 (505)
T ss_dssp HHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHHHCBC-
T ss_pred HhcCCCEEEEEECCccccccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEE--CCeEEEEEEeeCCHHHhhhcc-
Confidence 99999999999999998999999999999999999999999999999999999997 799999999999999887664
Q ss_pred CCCceeeeccceeeeEeehHHHHHHhhccccCccceeeccccCCCCC--------CcchhhhhHHHhhhcccCCceeEEE
Q 016006 242 ETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHG--------QTVGFKLEQFIFDAFPYAPSTALFE 313 (397)
Q Consensus 242 ~~g~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~--------~~~~~klE~fi~D~~~~~~~~~~~~ 313 (397)
++|.+.|+.+|||+|||++++|+++.+.....+|||++.|||||+++ .+||+|||+||||+|++++++.+++
T Consensus 317 ~~g~~~~~~~N~~~~~f~l~~L~~i~~~~~~~l~~hv~~Kkip~~d~~g~~v~P~~pn~~klE~~i~d~~~~~~~~~~~~ 396 (505)
T 1jv1_A 317 SDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYE 396 (505)
T ss_dssp TTSSBSSCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSSEEEEE
T ss_pred cccccccceeeEEEEEecHHHHHHHHHhhcccCCceecccccccccCCCCCcCCCCCCceeHHHHHHHHHhhcCceEEEE
Confidence 45788899999999999999999998765667999999999998863 3689999999999999999999999
Q ss_pred EecCccccccccCCCCC-CCCHHHHHHHHHHHHHHHHHHcCceeecCC-------CC------CCCcEEeCcccceeCCc
Q 016006 314 VLREEEFAPVKNANGSN-FDTPDSARLLVLRLHTRWVIAAGGFLTHSV-------PL------YATGVEVSPLCSYAGEN 379 (397)
Q Consensus 314 v~R~~~FsPvKn~~~~~-~dsp~ta~~~l~~~~~~~l~~~g~~~~~~~-------~~------~~~~~eisp~~sy~gE~ 379 (397)
|+|++||+||||++|.+ .|||+|||++|+++|++||++||+.+.++. +. ....|||||++||+|||
T Consensus 397 V~R~~~FsPvKn~~~~~~~dsp~ta~~~l~~~~~~~l~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~Eisp~~sy~ge~ 476 (505)
T 1jv1_A 397 VLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRLKDANDVPIQCEISPLISYAGEG 476 (505)
T ss_dssp ECHHHHCCBCCSCTTSSSSSSHHHHHHHHHHHHHHHHHHTTCEEBCTTCCBCCSSCCCCSTTCCCCCEEECTTTCSSSCS
T ss_pred ECcccceeeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCeecccccccccccccccccccCCCeEEECCccccCCCC
Confidence 99999999999999987 899999999999999999999999983211 00 11369999999999999
Q ss_pred chhhhcCcEecCCccc
Q 016006 380 LEAICRGRTFHAPCEI 395 (397)
Q Consensus 380 l~~~~~~~~~~~p~~~ 395 (397)
|+++++||+|+.|.++
T Consensus 477 l~~~~~~~~~~~~~~~ 492 (505)
T 1jv1_A 477 LESYVADKEFHAPLII 492 (505)
T ss_dssp CHHHHTTCEECSSEEE
T ss_pred chHHhcCCccCCCcee
Confidence 9999999999999986
No 4
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=1.3e-79 Score=639.56 Aligned_cols=334 Identities=20% Similarity=0.246 Sum_probs=297.8
Q ss_pred hHHHHHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcc
Q 016006 2 DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAA 81 (397)
Q Consensus 2 ~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ 81 (397)
++..+|+++|+++|+ |+|||+||||||||||+++||+++|+++++++||||+++++|+ ++ +++.
T Consensus 99 ~~~~~~~~~Gl~~i~--kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~---~~-----------~g~~ 162 (630)
T 3ogz_A 99 AERTALENAGTAMLC--KTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQ---RV-----------GGKE 162 (630)
T ss_dssp HHHHHHHHHHHHHGG--GEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHH---HH-----------HCTT
T ss_pred HHHHHHHHHhHHHHh--hceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHH---HH-----------hCCC
Confidence 678899999999998 9999999999999999999999999999999999999999998 22 2577
Q ss_pred eeEEEecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeee-cCCcccccCCCccccccCCCchHhHHHhhCc----
Q 016006 82 IHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVS-KDGRFIMETPYKVAKAPDGNGGVYSALKSSK---- 156 (397)
Q Consensus 82 ipl~IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~-~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg---- 156 (397)
|||+||||+.||+.|++||++ ||++++||++|+|+++||++ .+|+++++++++++|+|+||||+|.+|+++|
T Consensus 163 iPl~IMTS~~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~ 239 (630)
T 3ogz_A 163 VPFVIMTSDDTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRD 239 (630)
T ss_dssp CCEEEEECTTTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC---
T ss_pred CcEEEEecccchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcc
Confidence 999999999999999999998 99999999999999999996 7899999999999999999999999999999
Q ss_pred --------------hHHHHHHCCceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEe-CCCC
Q 016006 157 --------------LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRR-GKGG 221 (397)
Q Consensus 157 --------------~l~~l~~~G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~-~~~g 221 (397)
+|++|+++|++|+||+|+||+|++++||.|+||+++++++|+++|++|+ |.|++|++|+. +.+|
T Consensus 240 ~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~-p~E~vG~l~~~~~~dG 318 (630)
T 3ogz_A 240 VVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRV-PKEPIGLLCRTKKNSG 318 (630)
T ss_dssp -----------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCC-SSCSSCEEEEEESSTT
T ss_pred cccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEECC-CCcceeeEEEEecCCC
Confidence 9999999999999999999999999999999999999999999999985 99999999985 3478
Q ss_pred ce---EEEEeccCChhhhhhccCCCCc-------eeeeccceeeeEeehHHHHHHhhccccCccceeeccccC-CCCCCc
Q 016006 222 PL---TVVEYSELDPSLASAINQETGR-------LRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIP-SIHGQT 290 (397)
Q Consensus 222 ~~---~vvEy~el~~~~~~~~~~~~g~-------~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip-~~~~~~ 290 (397)
++ ++|||+|+++++++..+ ++|. ++|++||||||||+++.+.+.+......+|.+++.|.+. .-+.++
T Consensus 319 k~~~v~vVEYsei~~~~~~~~~-~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNpK~~d~~~~~~~ 397 (630)
T 3ogz_A 319 DPWLVANVEYNVFAEVSRALNK-DGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINPKYSDETRRSFK 397 (630)
T ss_dssp SCCEEEEECHHHHHHHHHHC-------------CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECCCBSSSSSCCBS
T ss_pred ceeeeeEEEeccCCHhHhhccC-CCccccccccccccccccceeeeEEHHHHHHHHHhccCccceecCCcccCCcccccC
Confidence 88 56999999999887543 2333 889999999999999977666654345688777766442 222346
Q ss_pred chhhhhHHHhhhcccCC----ceeEEEEecCccccccccCC---------CCCCCCHHHHHHHHHHHHHHHHHHcCceee
Q 016006 291 VGFKLEQFIFDAFPYAP----STALFEVLREEEFAPVKNAN---------GSNFDTPDSARLLVLRLHTRWVIAAGGFLT 357 (397)
Q Consensus 291 ~~~klE~fi~D~~~~~~----~~~~~~v~R~~~FsPvKn~~---------~~~~dsp~ta~~~l~~~~~~~l~~~g~~~~ 357 (397)
+++|||+||||++++++ ++.+++|+| .||+||||+. |.+.|||+||+.++++++++||++||+.++
T Consensus 398 ~~~qLEt~m~d~~~~F~~~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g~~~~sp~t~~~dly~~~~~~L~~aG~~v~ 476 (630)
T 3ogz_A 398 KPARIESLMQDIALLFSEDDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRLKAIGLPLF 476 (630)
T ss_dssp SCBCEECCGGGGGGGCCTTTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTTCCCCBHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cchhhhhHHHHHHHhccccCcceeEEEECC-CeeecccCChhHhhhhhccCCCcCChHHHHHHHHHHHHHHHHHcCceec
Confidence 78999999999888775 447899999 7999999997 889999999999999999999999999876
No 5
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=4e-79 Score=622.77 Aligned_cols=299 Identities=21% Similarity=0.256 Sum_probs=273.6
Q ss_pred HhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecC
Q 016006 10 MGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTS 89 (397)
Q Consensus 10 ~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS 89 (397)
.|+++|+ |+|||+||||||||||+++|||++|++ +++||||++++||++++++ +++.|||+||||
T Consensus 69 ~G~~~L~--kvavvlLaGGlGTRLG~~~pKg~~~v~--sgksflql~~eqI~~l~~~-----------~~~~iPl~IMTS 133 (484)
T 3gue_A 69 ENTALLR--QAVVLKLNGGLGTGMGLNGPKSLLQVK--NGQTFLDFTALQLEHFRQV-----------RNCNVPFMLMNS 133 (484)
T ss_dssp CCHHHHT--TEEEEEEECCCCGGGTCSSCGGGSEEE--TTEEHHHHHHHHHHHHHHH-----------HTCCCCEEEEEC
T ss_pred HHHHHHh--hcEEEEEcCCcccccCCCCCceeeecC--CCCcHHHHHHHHHHHHHHH-----------cCCCceEEEECC
Confidence 6999999 999999999999999999999999997 9999999999999999875 367899999999
Q ss_pred ccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcc--cccCCCccccccCCCchHhHHHhhCchHHHHHHCCce
Q 016006 90 PFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRF--IMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIK 167 (397)
Q Consensus 90 ~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~--~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~e 167 (397)
+.||++|++||++|+|||+++++|++|+|+++||++.+|+. +++++++++|+|+||||+|.+|+++|+|++|+++|+|
T Consensus 134 ~~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gie 213 (484)
T 3gue_A 134 FSTSGETKNFLRKYPTLYEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYR 213 (484)
T ss_dssp TTTHHHHHHHGGGCHHHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCC
T ss_pred cchhHHHHHHHHhCcccCCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCE
Confidence 99999999999999999999999999999999999999984 4577889999999999999999999999999999999
Q ss_pred EEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEe--------CCCCceEEEEeccCChhhhhhc
Q 016006 168 YIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRR--------GKGGPLTVVEYSELDPSLASAI 239 (397)
Q Consensus 168 yv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~--------~~~g~~~vvEy~el~~~~~~~~ 239 (397)
|+||+|+|| |++++||.|+||++++++++++||++|+.|+|+||+||++ +.+|+++++||+|+|++.++++
T Consensus 214 yi~v~~vDN-L~a~~Dp~~lG~~~~~~~d~~~kvv~Kt~~dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f 292 (484)
T 3gue_A 214 YMFISNGDN-LGATLDVRLLDYMHEKQLGFLMEVCRRTESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSF 292 (484)
T ss_dssp EEEEEETTC-TTCCCCHHHHHHHHHTTCSEEEEEEECCTTCCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHHH
T ss_pred EEEEEcCCC-cccccCHHHHHHHHhcCCCEEEEEEECCCCCCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhhh
Confidence 999999999 6999999999999999999999999999999999999997 3479999999999999998875
Q ss_pred cCCCCceeeeccceeeeEeehHHHHHHhhcc--ccCccceeeccccCCCC-CCcchhhhhHHHhhhcccCCceeEEEEec
Q 016006 240 NQETGRLRFCWSNVCLHMFTLDFLNQVANGL--EKDSVYHLAEKKIPSIH-GQTVGFKLEQFIFDAFPYAPSTALFEVLR 316 (397)
Q Consensus 240 ~~~~g~~~f~~~Ni~~~~~~l~~L~~~~~~~--~~~lp~h~a~kkip~~~-~~~~~~klE~fi~D~~~~~~~~~~~~v~R 316 (397)
...+|.+.| |+||+|+++++|+++++.. ...||+|++.|+|...+ ..+|++|||+||||+|++++++.+++|+|
T Consensus 293 ~~~~g~~~F---NtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R 369 (484)
T 3gue_A 293 QNIAKHCFF---NTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPR 369 (484)
T ss_dssp TCTTTSCEE---EEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSSSEEEEECCG
T ss_pred cCCCCceEe---EeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCCccEEEEECh
Confidence 545676766 6666788899998888754 34689999999995443 56899999999999999999999999999
Q ss_pred CccccccccCCC
Q 016006 317 EEEFAPVKNANG 328 (397)
Q Consensus 317 ~~~FsPvKn~~~ 328 (397)
+||+||||+++
T Consensus 370 -~rF~PvKn~sd 380 (484)
T 3gue_A 370 -ERFAPVKTCSD 380 (484)
T ss_dssp -GGCCCCSSHHH
T ss_pred -hhccccccchH
Confidence 69999999953
No 6
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=5.2e-78 Score=618.58 Aligned_cols=312 Identities=21% Similarity=0.248 Sum_probs=275.0
Q ss_pred HHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEE
Q 016006 7 WWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYI 86 (397)
Q Consensus 7 ~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~I 86 (397)
|+..+...+..+|+|||+||||||||||+++|||++|+ +++|||||++++||+++++. +++.|||+|
T Consensus 115 ~~~~~~~~~~l~kvavvlLaGGlGTRLG~~~PK~~i~V--~sgktflql~~eqI~~l~~~-----------~g~~IPl~I 181 (528)
T 3r3i_A 115 RGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGV--RNENTFLDLTVQQIEHLNKT-----------YNTDVPLVL 181 (528)
T ss_dssp SCCCCSSCTTCTTEEEEEECCCBCTTTTCSSBGGGSEE--ETTEEHHHHHHHHHHHHHHH-----------HTCCCCEEE
T ss_pred ccccchhhhhcCceEEEEeCCCCccccCCCCCccceec--CCCCcHHHHHHHHHHHHHHH-----------hCCCCCEEE
Confidence 33344445667899999999999999999999999886 69999999999999998864 367899999
Q ss_pred ecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccC------CCccccccCCCchHhHHHhhCchHHH
Q 016006 87 MTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMET------PYKVAKAPDGNGGVYSALKSSKLLED 160 (397)
Q Consensus 87 MtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~------~~~i~~~P~G~Ggi~~~L~~sg~l~~ 160 (397)
|||+.||+.|++||++|+||| .+|++|+|+++||++.+|++++++ +++++|+|+||||+|.+|+++|+|++
T Consensus 182 MTS~~T~~~T~~~f~k~~~fg---~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~ 258 (528)
T 3r3i_A 182 MNSFNTDEDTKKILQKYNHCR---VKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDT 258 (528)
T ss_dssp EECTTTHHHHHSSCGGGTTSS---CCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHH
T ss_pred EeccchhHHHHHHHHhcCccC---CCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHH
Confidence 999999999999999999998 489999999999999999999987 78999999999999999999999999
Q ss_pred HHHCCceEEEEEcCCCccccccccccchhhhcc----CCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhh
Q 016006 161 MATRGIKYIDCYGVDNALVRVADPTFLGYFIDK----GVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLA 236 (397)
Q Consensus 161 l~~~G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~----~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~ 236 (397)
|.++|+||+||+|+||++++ +||.|+||++.+ ++++++||++|+.|+|++|++|+. +|+++||||+|+|++.+
T Consensus 259 l~~~Gieyi~v~nvDNlga~-vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~--dGk~~vvEyseip~e~~ 335 (528)
T 3r3i_A 259 FIGEGKEYIFVSNIDNLGAT-VDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQY--EGKLRLVEIAQVPKAHV 335 (528)
T ss_dssp HHHTTCCEEEEEETTBTTCC-CCHHHHHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECS--SSSCEEECTTSSCGGGT
T ss_pred HHhcCCEEEEEEccCCcccc-cCHHHHHHHHhcccccCCcEEEEEeEccccCCcccEEEEE--CCeEEEEEecCCChhHh
Confidence 99999999999999999865 699999999998 999999999999999999999997 79999999999999987
Q ss_pred hhccCCCCceeeeccceeeeEeehHHHHHHhhccccCccceeeccccCCCCCCcchhhhhHHHhhhcccCCceeEEEEec
Q 016006 237 SAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLR 316 (397)
Q Consensus 237 ~~~~~~~g~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~~~~~~klE~fi~D~~~~~~~~~~~~v~R 316 (397)
++ .+|.++|+++|||||||+++||+++++.....+|+|++.|++| ..++++|+|+||||+|++++++.+++|+|
T Consensus 336 ~~---~~g~~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd---~~~~viqlEt~igd~i~~f~~~~~i~VpR 409 (528)
T 3r3i_A 336 DE---FKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLD---GGLNVIQLETAVGAAIKSFENSLGINVPR 409 (528)
T ss_dssp TT---SSCSSSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCS---SSSCEEEEEBCSTTCSTTSSSCCCEECCG
T ss_pred hc---cCCcccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccC---CCCCEEEeHHHHHHHHHhccCcEEEEEeh
Confidence 65 3678899999999999999999999987556799999999875 45789999999999999999999999999
Q ss_pred CccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCcee
Q 016006 317 EEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFL 356 (397)
Q Consensus 317 ~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~~g~~~ 356 (397)
+ ||+||||+++ |+...++++.-..+.+
T Consensus 410 ~-rF~PvKn~sd------------Lll~~Sdly~l~~g~l 436 (528)
T 3r3i_A 410 S-RFLPVKTTSD------------LLLVMSNLYSLNAGSL 436 (528)
T ss_dssp G-GCCBCCSHHH------------HHHHHSTTSEEETTEE
T ss_pred H-HcccccchHH------------HHHHhcceeEeeCCeE
Confidence 9 5999999964 6655566655444444
No 7
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=3.1e-74 Score=593.89 Aligned_cols=332 Identities=21% Similarity=0.250 Sum_probs=300.5
Q ss_pred HhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecC
Q 016006 10 MGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTS 89 (397)
Q Consensus 10 ~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS 89 (397)
.|+++|+ ++++|+||||+|||||++.||+|+||+ ++|||||+++++|++++.. +++.|||+||||
T Consensus 68 ~g~~~l~--k~avViLAGGlGTRLg~~~PK~llpV~--~gk~fLe~~ie~l~~~~~~-----------~g~~ip~viMtS 132 (505)
T 2oeg_A 68 CDNAVLQ--STVVLKLNGGLGTGMGLCDAKTLLEVK--DGKTFLDFTALQVQYLRQH-----------CSEHLRFMLMDS 132 (505)
T ss_dssp CCHHHHH--TEEEEEEECCCCGGGTCCSCGGGSEEE--TTEEHHHHHHHHHHHHHHH-----------TCTTCEEEEEEC
T ss_pred HHHHHHh--cceEEEEcCCcccccCCCCCCcccccC--CCCcHHHHHHHHHHHHHHh-----------cCCCcCEEEEeC
Confidence 7999999 999999999999999999999999997 7999999999999998865 357799999999
Q ss_pred ccchHHHHHHHh-hcCCCCCCCCcEEEEEcCCeeeeecCC-ccc-ccCCCccccccCCCchHhHHHhhCchHHHHHHCCc
Q 016006 90 PFTDDATRKYFE-GHKYFGLESDQVTFFQQGTIPCVSKDG-RFI-METPYKVAKAPDGNGGVYSALKSSKLLEDMATRGI 166 (397)
Q Consensus 90 ~~t~~~t~~~~~-~~~~fgl~~~~v~~f~Q~~~P~~~~~g-~~~-l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~ 166 (397)
++|++.|++||+ ++++||+++++|.+|+|+++||++.+| +++ ++++..++++|+||||+|.+|+++|++++|.++|+
T Consensus 133 ~~t~e~t~~~f~~~~~~fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~ 212 (505)
T 2oeg_A 133 FNTSASTKSFLKARYPWLYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGY 212 (505)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTC
T ss_pred CCCHHHHHHHHhhhhhccCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCC
Confidence 999999999999 999999999999999999999999988 545 66777799999999999999999999999999999
Q ss_pred eEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeC-----CCCc-------eEEEEeccCChh
Q 016006 167 KYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRG-----KGGP-------LTVVEYSELDPS 234 (397)
Q Consensus 167 eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~-----~~g~-------~~vvEy~el~~~ 234 (397)
+|++|+|+||+ ++.+||.|+|||.+++++++++|++|+.|++++|+++.++ .+|+ ++++||+|+|++
T Consensus 213 e~i~V~N~DNL-~~~~D~~llg~~~~~~ad~~~~v~~k~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e 291 (505)
T 2oeg_A 213 RYMFVSNGDNL-GATIDKRVLAYMEKEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKA 291 (505)
T ss_dssp CEEEEECTTCT-TCCCCHHHHHHHHHHTCSEEEEEEECCTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGG
T ss_pred CEEEEEECCcc-ccccCHHHHHHHHhcCCcEEEEEEEecCCccceeEEEEecccccccCCccccccCceeEEEeccCChh
Confidence 99999999995 8999999999999999999999999999999999999943 3799 999999999999
Q ss_pred hhhhccCCCCceeeeccceeeeEeehHHHHHHhhc--cccCccceeeccccCCCC-CCcchhhhhHHHhhhcccCCceeE
Q 016006 235 LASAINQETGRLRFCWSNVCLHMFTLDFLNQVANG--LEKDSVYHLAEKKIPSIH-GQTVGFKLEQFIFDAFPYAPSTAL 311 (397)
Q Consensus 235 ~~~~~~~~~g~~~f~~~Ni~~~~~~l~~L~~~~~~--~~~~lp~h~a~kkip~~~-~~~~~~klE~fi~D~~~~~~~~~~ 311 (397)
.++++ +|.++|+++|||||||+++||+++++. ....||+|++.|++|+.+ ..++++|||+||||+|++++++.+
T Consensus 292 ~~~~~---~g~~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~~~~ 368 (505)
T 2oeg_A 292 DMESF---QDINKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASA 368 (505)
T ss_dssp GHHHH---HCTTTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTTCEE
T ss_pred hhhcc---cCccccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCcceE
Confidence 88765 467888889999999999999999875 223689999999998876 458999999999999999999999
Q ss_pred EEEecCccccccccCCCCCCCCHHHHHHHHHHHHH--HHHHHcCceeecCCCCCCCcEEeCcc
Q 016006 312 FEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHT--RWVIAAGGFLTHSVPLYATGVEVSPL 372 (397)
Q Consensus 312 ~~v~R~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~--~~l~~~g~~~~~~~~~~~~~~eisp~ 372 (397)
++|+|+ ||+||||+ ++|.++|.+++.+++ +|++ +|+.+. ..| .|+++|.
T Consensus 369 ~~V~R~-~FsPvKn~-----~dl~~~~sdly~~~~~~~~~~-~~~~~~-~~p----~i~l~p~ 419 (505)
T 2oeg_A 369 IVVPRS-RFAPVKTC-----ADLLALRSDAYVVTDDFRLVL-DDRCHG-HPP----VVDLDSA 419 (505)
T ss_dssp EECCGG-GCCCCSSH-----HHHHHHHSTTEEECTTCCEEE-CGGGTT-CCC----EEEECHH
T ss_pred EEeccc-eeecccCC-----CCHHHHHHHHHhhcCCceEEE-cccccC-cCC----eEEEChh
Confidence 999999 99999997 789999999999988 7876 565332 122 4888887
No 8
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-70 Score=561.02 Aligned_cols=339 Identities=21% Similarity=0.251 Sum_probs=294.2
Q ss_pred hccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccch
Q 016006 14 AISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTD 93 (397)
Q Consensus 14 ~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~ 93 (397)
++..+|++||+||||+|||||++.||+|+|| ++||||||++++++++++.. +++.|||+||||++|+
T Consensus 87 ~~~~~k~avViLAGG~GTRmgs~~PK~l~~V--~~gk~~Le~~i~~i~~l~~~-----------~G~~Ip~vImts~~t~ 153 (488)
T 2i5k_A 87 VSNLSKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSVRQIEYLNRQ-----------YDSDVPLLLMNSFNTD 153 (488)
T ss_dssp STTGGGEEEEEECCCBSGGGTCCSBSTTSCC--BTTBCHHHHHHHHHHHHHHH-----------HTCCCEEEEECCTTTH
T ss_pred hhhcCCceEEEEcCCCcccCCCCCCcccccc--CCCCcHHHHHHHHHHHhHHh-----------cCCCccEEEEECCCCH
Confidence 3445699999999999999999999999987 56999999999999987654 3577999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCC---ccccccCCCchHhHHHhhCchHHHHHHCCceEEE
Q 016006 94 DATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPY---KVAKAPDGNGGVYSALKSSKLLEDMATRGIKYID 170 (397)
Q Consensus 94 ~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~---~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~ 170 (397)
+.|++||+++++||+ +|.+|.|+++||++.+|+++++.++ +++++|+||||+|.+|+.+|++++|.++|++|++
T Consensus 154 e~t~~~~~~~~~fg~---~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~ 230 (488)
T 2i5k_A 154 KDTEHLIKKYSANRI---RIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILF 230 (488)
T ss_dssp HHHHHHHGGGCSSSC---EEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhccccCc---eEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEE
Confidence 999999999999997 6999999999999999999998765 6899999999999999999999999999999999
Q ss_pred EEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeec
Q 016006 171 CYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCW 250 (397)
Q Consensus 171 v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~ 250 (397)
|+|+|| |++..||.++|+|.+++++++++++++++|++++|+|++. +|+.++|||+|++++.+++++ +...|+.
T Consensus 231 V~ngDn-L~~~~d~~~L~~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~--dG~~~iVE~~e~~~e~~~~~~---~~~~~~~ 304 (488)
T 2i5k_A 231 VSNGDN-LGATVDLKILNHMIETGAEYIMELTDKTRADVKGGTLISY--DGQVRLLEVAQVPKEHIDEFK---NIRKFTN 304 (488)
T ss_dssp EECTTB-SSCCCCHHHHHHHHHSCCSEEEEEEECCGGGSSSCEEEEE--TTEEEEECGGGSCTTSHHHHT---CTTTCCE
T ss_pred EEeCCc-CCCcccHHHHHHHHhcCCcEEEEEEEecCCCCceeEEEEE--CCcEEEEEeccCCHHHHhhcc---cccccCE
Confidence 999999 7899999999999999999999999999999999999987 788999999999998776553 3456666
Q ss_pred cceeeeEeehHHHHHHhhccccCccceeeccccCCCCCCcchhhhhHHHhhhcccCCceeEEEEecCccccccccCCCCC
Q 016006 251 SNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSN 330 (397)
Q Consensus 251 ~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~~~~~~klE~fi~D~~~~~~~~~~~~v~R~~~FsPvKn~~~~~ 330 (397)
.|+|+|||++++|+++++.....+|+|++.|+||+.+...+++|||+||||+|++++++.+++|+|+ ||+||||++
T Consensus 305 ~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~-~F~PvKn~~--- 380 (488)
T 2i5k_A 305 FNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRS-RFLPVKTCS--- 380 (488)
T ss_dssp EEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGSSSCEEEEECGG-GCCBCCSHH---
T ss_pred EEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhccCceEEEeccc-ccccccCCc---
Confidence 7999999999999999987556799999999999844457899999999999999999999999999 899999984
Q ss_pred CCCHHHHHHHHHHHHHHHHHHcCceeecCCCCCCCcEEeCcccceeCCcchhhhcCcE----ecC-Cccc
Q 016006 331 FDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRT----FHA-PCEI 395 (397)
Q Consensus 331 ~dsp~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~eisp~~sy~gE~l~~~~~~~~----~~~-p~~~ 395 (397)
.+++.++.+|...+|..+.+. ..+|++|+|+|+|+ +.++++ |+. |.++
T Consensus 381 --------~ll~~~~~~~~~~~g~~~~~~-----~~~e~~P~v~~~~~----~~~~~~~~~rf~~~p~i~ 433 (488)
T 2i5k_A 381 --------DLLLVKSDLFRLEHGSLKLDP-----SRFGPNPLIKLGSH----FKKVSGFNARIPHIPKIV 433 (488)
T ss_dssp --------HHHHHTSTTEEEETTEEEECT-----TCCSSCCEEEECGG----GSSHHHHHHHCSSCCBCT
T ss_pred --------cHHHHHHHHHHHhcCcEeecC-----CcCCCCCeEEECCc----ccchhhHHhhcCCCcccc
Confidence 345666677777788765421 13899999999994 334444 766 7664
No 9
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=7.4e-69 Score=551.18 Aligned_cols=332 Identities=20% Similarity=0.239 Sum_probs=292.6
Q ss_pred HHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEE
Q 016006 6 RWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWY 85 (397)
Q Consensus 6 ~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~ 85 (397)
+|++.|++++ ||+++|+||||+|||||++.||+|+|+ +++|||||+++++|++++.. +++.|||+
T Consensus 68 ~~~~~g~~~l--~k~~vviLAGGlGTRLg~~~PK~llpv--~~gkp~Le~~i~~l~~~~~~-----------~G~~ip~v 132 (469)
T 2icy_A 68 QDVAETKNLL--DKLVVLKLNGGLGTTMGCTGPKSVIEV--RDGLTFLDLIVIQIENLNNK-----------YGCKVPLV 132 (469)
T ss_dssp SCHHHHHHHH--TTEEEEEEECCBSGGGTCCSBGGGSEE--ETTEEHHHHHHHHHHHHHHH-----------HSCCCCEE
T ss_pred hhHHHHHHhh--ccceEEEEcCCccccCCCCCCcccccc--CCCCCHHHHHHHHHHHHHHh-----------cCCCccEE
Confidence 4567899999 599999999999999999999999887 46999999999999987654 35779999
Q ss_pred EecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCC---CccccccCCCchHhHHHhhCchHHHHH
Q 016006 86 IMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETP---YKVAKAPDGNGGVYSALKSSKLLEDMA 162 (397)
Q Consensus 86 IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~---~~i~~~P~G~Ggi~~~L~~sg~l~~l~ 162 (397)
||||++|++.|++||++|++||+ +|++|+|+++||++.+|+++++++ ++++++|+||||+|++|+++|++++|.
T Consensus 133 imts~~t~e~t~~~f~~~~~fG~---~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~ 209 (469)
T 2icy_A 133 LMNSFNTHDDTHKIVEKYTNSNV---DIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFL 209 (469)
T ss_dssp EEECTTTHHHHHHHHGGGTTSSS---CEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHH
T ss_pred EEeCCCCHHHHHHHHHhcccCCc---eEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHH
Confidence 99999999999999999999998 699999999999999999999876 789999999999999999999999999
Q ss_pred HCCceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCC
Q 016006 163 TRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQE 242 (397)
Q Consensus 163 ~~G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~ 242 (397)
++|++|++|+|+||+ ++.+||.|+|||.+++++++++|++|+.|++++|+++.. +|+.+++||+|+|++.++++..
T Consensus 210 ~~G~e~~~V~n~DnL-~~~~d~~ll~~~~~~~a~~t~~v~~k~~~~~~~Gvl~~~--dg~~~vvE~~e~p~~~~~e~k~- 285 (469)
T 2icy_A 210 SQGKEYVFVANSDNL-GAIVDLTILKHLIQNKNEYCMEVTPKTLADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKS- 285 (469)
T ss_dssp TTTCCEEEEEETTBT-TCCCCHHHHHHHHHHTCSEEEEEEECCTTCCSSCEEEEE--TTEEEEECGGGSCGGGHHHHHS-
T ss_pred hcCCCEEEEEECCcC-CcccCHHHHHHHHHcCCCeeEEEEEeccCCCceeEEEEE--CCEEEEEEEeccChhhhhhhcc-
Confidence 999999999999995 799999999999999999999999999999999999987 7999999999999987654311
Q ss_pred CCceeeeccceeeeEeehHHHHHHhhccccCccceeeccccCCCCCCcchhhhhHHHhhhcccCCceeEEEEecCccccc
Q 016006 243 TGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAP 322 (397)
Q Consensus 243 ~g~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~~~~~~klE~fi~D~~~~~~~~~~~~v~R~~~FsP 322 (397)
...|+..|||+|||++++|+++.+.....+|+|++.|++ + ..+++|||+||||++++++++.+++|+|+ ||+|
T Consensus 286 --~~~~~~~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~i---d-~~~~~klE~~~~D~~~~~~~~~~~~V~R~-~F~P 358 (469)
T 2icy_A 286 --IEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEV---D-GVKVLQLETAAGAAIRFFDNAIGVNVPRS-RFLP 358 (469)
T ss_dssp --SSSCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEE---T-TEEEECCBCCGGGGGGGSTTCEEEECCGG-GCCB
T ss_pred --ccccceeeEEEEEEcHHHHHHHHhcccCCchhhccceec---C-CCceEeehHhhHHHHHhcCCeEEEEechh-HcCc
Confidence 245566799999999999999987655679999999987 3 47899999999999999999999999998 8999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHH-HHHHcCceeecCCCCCCCcEEeCcccceeCCcchhh
Q 016006 323 VKNANGSNFDTPDSARLLVLRLHTR-WVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAI 383 (397)
Q Consensus 323 vKn~~~~~~dsp~ta~~~l~~~~~~-~l~~~g~~~~~~~~~~~~~~eisp~~sy~gE~l~~~ 383 (397)
|||++ +++..+++ |...+|..+.+. . ..+|++|+|+|++| ++.+
T Consensus 359 vKn~~------------dll~~~s~l~~~~~g~~~~~~--~--~~~~~~P~v~l~~~-~~~v 403 (469)
T 2icy_A 359 VKASS------------DLLLVQSDLYTLVDGFVTRNK--A--RTNPSNPSIELGPE-FKKV 403 (469)
T ss_dssp CCSHH------------HHHHHHSTTEEEETTEEEECT--T--CCSSSCCEEEECGG-GCSH
T ss_pred CCCHH------------HHHHHHHHHHHHhcCcEEecC--c--ccCCCCCeEEcChh-hhhH
Confidence 99984 56666777 666667654321 1 14899999999988 6543
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.70 E-value=1.1e-16 Score=165.81 Aligned_cols=256 Identities=17% Similarity=0.143 Sum_probs=175.5
Q ss_pred CCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHH
Q 016006 18 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 97 (397)
Q Consensus 18 gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~ 97 (397)
+.++|||||||+||||....||.|+|| .||+++++.++.+..+ + +--+++...+..+.++
T Consensus 11 ~~~~vvILAaG~GtRm~~~~pK~l~pv---~gkp~i~~~l~~~~~~---------------g--~~~i~vv~~~~~~~i~ 70 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDTPKVLHTL---AGRSMLSHVLHAIAKL---------------A--PQRLIVVLGHDHQRIA 70 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSSCGGGCEE---TTEEHHHHHHHHHHHH---------------C--CSEEEEEECTTHHHHH
T ss_pred CCceEEEECCcCcccCCCCCCHHHeEE---CChhHHHHHHHHHHhC---------------C--CCEEEEEeCCCHHHHH
Confidence 689999999999999999999999999 9999999999887641 1 1123333457789999
Q ss_pred HHHhh-cCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCC
Q 016006 98 KYFEG-HKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 176 (397)
Q Consensus 98 ~~~~~-~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN 176 (397)
++|++ .+.+|. +|.+..|. .|.|+|++.....+ .+...-...+++.+.|.
T Consensus 71 ~~~~~~~~~~~~---~i~~~~q~---------------------~~lGTa~Av~~a~~-----~l~~~~~~~~lvl~gd~ 121 (501)
T 3st8_A 71 PLVGELADTLGR---TIDVALQD---------------------RPLGTGHAVLCGLS-----ALPDDYAGNVVVTSGDT 121 (501)
T ss_dssp HHHHHHHHHHTS---CCEEEECS---------------------SCCCHHHHHHHHHT-----TSCTTCCSEEEEEETTC
T ss_pred HHHHHHHHhcCC---cEEEEEcC---------------------CCCCcHHHHHHHHH-----HhccccccceeeecCcc
Confidence 99976 234564 57777776 58899998775432 22222346789999999
Q ss_pred cccccccc-ccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCc-eEEEEeccCChhhhhhccCCCCceeeecccee
Q 016006 177 ALVRVADP-TFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGP-LTVVEYSELDPSLASAINQETGRLRFCWSNVC 254 (397)
Q Consensus 177 ~l~~~~Dp-~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~-~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~ 254 (397)
+|....+. .++.+|...++++++-+.+..+|..+ |++.++. +|+ ..++|..+.+++.. ..+..|++
T Consensus 122 ~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~y-G~i~~~~-~g~v~~ivEk~~~~~~~~----------~i~~in~G 189 (501)
T 3st8_A 122 PLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGY-GRILRTQ-DHEVMAIVEQTDATPSQR----------EIREVNAG 189 (501)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTS-CEEEECT-TCCEEEEECGGGCCHHHH----------HCCEEEEE
T ss_pred eeecHHHHHHHHHHHhhccccceEeeeccCCchhc-ccccccc-ceeEEeeccccCCChhhc----------cceeeece
Confidence 87543222 26788888999999888888777665 7777763 554 45677777666522 12457999
Q ss_pred eeEeehHHHHHHhhccccCccceeeccccCCCCCCcchhhhhHHHhhhcccCC----ceeEEEEecCccccccccCCCCC
Q 016006 255 LHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAP----STALFEVLREEEFAPVKNANGSN 330 (397)
Q Consensus 255 ~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~~~~~~klE~fi~D~~~~~~----~~~~~~v~R~~~FsPvKn~~~~~ 330 (397)
+++|+.+.|++++..+. . .| .+-|.++.|++.+.. ....+.....++...+.+.
T Consensus 190 iy~f~~~~l~~~l~~l~----------------~-~n-~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~---- 247 (501)
T 3st8_A 190 VYAFDIAALRSALSRLS----------------S-NN-AQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNR---- 247 (501)
T ss_dssp EEEEEHHHHHHHHTTCC----------------C-CS-TTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSH----
T ss_pred eeeecchhHHHhhhhhc----------------c-cc-cccccchhhHHHHHHhcCceEEEEeccchhhhcccccH----
Confidence 99999999988876421 1 23 567888888877642 2333444444444444333
Q ss_pred CCCHHHHHHHHHHHHHHHHHHcCceee
Q 016006 331 FDTPDSARLLVLRLHTRWVIAAGGFLT 357 (397)
Q Consensus 331 ~dsp~ta~~~l~~~~~~~l~~~g~~~~ 357 (397)
.....++..+..+..+.++..|+.+.
T Consensus 248 -~~l~~~~~~~~~r~~~~~~~~gv~~~ 273 (501)
T 3st8_A 248 -VQLAELASELNRRVVAAHQLAGVTVV 273 (501)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTTCEES
T ss_pred -HHHHHHHHHhhhhhhhhhcccCceee
Confidence 33455556666666777778888764
No 11
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.27 E-value=1.9e-11 Score=115.27 Aligned_cols=188 Identities=16% Similarity=0.161 Sum_probs=121.4
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ ||.++|+ .|||++++.++++.. .++. .++|-| .++.+.+
T Consensus 2 ~~~aiIlA~G~stRlp---~K~L~~i---~GkPli~~~l~~l~~---------------~~~~-~ivVv~---~~~~i~~ 56 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKPLADI---GGKPMIQWVYEQAMQ---------------AGAD-RVIIAT---DDERVEQ 56 (252)
T ss_dssp CEEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHH---------------TTCS-EEEEEE---SCHHHHH
T ss_pred ceEEEEecCcCCCCCC---CcceeeE---CCEEHHHHHHHHHHh---------------CCCC-eEEEEC---CHHHHHH
Confidence 5889999999999995 7999999 899999999998763 1221 235555 2588999
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ ||. ++.+..| ..|.|+|++..++.. +...+-++++++++|++|
T Consensus 57 ~~~~---~g~---~v~~~~~---------------------~~~~Gt~~~~~~~~~------l~~~~~d~vlv~~gD~Pl 103 (252)
T 3oam_A 57 AVQA---FGG---VVCMTSP---------------------NHQSGTERLAEVVAK------MAIPADHIVVNVQGDEPL 103 (252)
T ss_dssp HHHH---TTC---EEEECCT---------------------TCCSHHHHHHHHHHH------TTCCTTSEEEECCTTCTT
T ss_pred HHHH---cCC---EEEEcCC---------------------CCCCcHHHHHHHHHh------cCcCCCCEEEEEeCCeee
Confidence 9985 454 2322212 257899987766532 211246899999999997
Q ss_pred cccccc-ccchhhhccCCcEEEEEeecCCCCcc----cceEEEeCCCCceEEEEeccC--ChhhhhhccCCCCc-eeeec
Q 016006 179 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQEK----VGVFVRRGKGGPLTVVEYSEL--DPSLASAINQETGR-LRFCW 250 (397)
Q Consensus 179 ~~~~Dp-~~lg~~~~~~~~~~~kv~~k~~p~e~----vGvl~~~~~~g~~~vvEy~el--~~~~~~~~~~~~g~-~~f~~ 250 (397)
....+. .++..+.+.++++++-+++-.+|.+. +|.++.+ ++|+ ++.+++- +.. .......... ..-+.
T Consensus 104 i~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d-~~g~--v~~fsr~~i~~~-~~~~~~~~~~~~~~~~ 179 (252)
T 3oam_A 104 IPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITD-KSGY--ALYFSRATIPWD-RDNFAKADKAIVQPLL 179 (252)
T ss_dssp CCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEEC-TTSB--EEEEESSCSSCC-HHHHHSSSCCCCSCEE
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEEC-CCCe--EEEEeCCCCCCC-CCccccccccccccce
Confidence 543333 25566666678888777766555443 2556654 3674 5777763 221 1110000000 11235
Q ss_pred cceeeeEeehHHHHHHhh
Q 016006 251 SNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 251 ~Ni~~~~~~l~~L~~~~~ 268 (397)
.|+++|.|+.++|+++.+
T Consensus 180 ~n~GiY~~~~~~l~~~~~ 197 (252)
T 3oam_A 180 RHIGIYAYRAGFINTYLD 197 (252)
T ss_dssp EEEEEEEEETTHHHHHHH
T ss_pred EEEEEEEcCHHHHHHHHc
Confidence 799999999999998765
No 12
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.22 E-value=2.3e-10 Score=108.73 Aligned_cols=182 Identities=14% Similarity=0.174 Sum_probs=122.3
Q ss_pred CCCEEEEEecCCCCCcCCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccch
Q 016006 17 DGKLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTD 93 (397)
Q Consensus 17 ~gkvavviLaGG~GTRLg~---~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~ 93 (397)
+.++.+||||||.||||+. ..||.++|+ .|++++++.++.+.+ .++. .++|.|.....
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i---~g~pli~~~l~~l~~---------------~g~~-~iivv~~~~~~ 82 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPV---GRYPMIYHAVYKLKQ---------------CDIT-DIMIITGKEHM 82 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEECTTTH
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEE---CCEEHHHHHHHHHHH---------------CCCC-EEEEECChhhH
Confidence 4568899999999999986 889999999 799999999998763 1211 23555554445
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEc
Q 016006 94 DATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYG 173 (397)
Q Consensus 94 ~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~ 173 (397)
+.+.++++....||+ ++.+..|. .+.|+|+.+... ++.+ +-++++|.+
T Consensus 83 ~~~~~~~~~~~~~~~---~i~~~~~~---------------------~~~G~~~al~~a-----~~~~---~~~~~lv~~ 130 (269)
T 4ecm_A 83 GDVVSFLGSGQEFGV---SFTYRVQD---------------------KAGGIAQALGLC-----EDFV---GNDRMVVIL 130 (269)
T ss_dssp HHHHHHHTTSGGGTC---EEEEEECS---------------------SCCCHHHHHHTT-----HHHH---TTSEEEEEE
T ss_pred HHHHHHHhhccccCc---eEEEeeCC---------------------ccCcHHHHHHHH-----HHhc---CCCcEEEEe
Confidence 778899976555665 34333232 366777766543 2223 247899999
Q ss_pred CCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccce
Q 016006 174 VDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNV 253 (397)
Q Consensus 174 vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni 253 (397)
+|+++ ...--.++..+.+.++++++-+.+..+| ...|++..+ +| .|+++.|-|.. ...+..|+
T Consensus 131 ~D~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d--~g--~v~~~~ekp~~-----------~~~~~~~~ 193 (269)
T 4ecm_A 131 GDNIF-SDDIRPYVEEFTNQKEGAKVLLQSVDDP-ERFGVANIQ--NR--KIIEIEEKPKE-----------PKSSYAVT 193 (269)
T ss_dssp TTEEE-SSCSHHHHHHHHTSSSSEEEEEEECSCG-GGSEEEEEE--TT--EEEEEEESCSS-----------CSCSEEEE
T ss_pred CCccC-ccCHHHHHHHHHhcCCCeEEEEEECCCC-CCceEEEEc--CC--EEEEEEECCCC-----------CCCcEEEE
Confidence 99986 3333346777777888888777766554 456877765 45 45666654421 01134689
Q ss_pred eeeEeehHHHHHH
Q 016006 254 CLHMFTLDFLNQV 266 (397)
Q Consensus 254 ~~~~~~l~~L~~~ 266 (397)
++++|+.++++.+
T Consensus 194 Giy~~~~~~l~~l 206 (269)
T 4ecm_A 194 GIYLYDSKVFSYI 206 (269)
T ss_dssp EEEEECTTHHHHH
T ss_pred EEEEECHHHHHhh
Confidence 9999999887543
No 13
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.12 E-value=1.2e-09 Score=105.40 Aligned_cols=183 Identities=17% Similarity=0.227 Sum_probs=119.0
Q ss_pred CEEEEEecCCCCCcCC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHH
Q 016006 19 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 95 (397)
Q Consensus 19 kvavviLaGG~GTRLg---~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~ 95 (397)
++.+||||||.||||+ ...||.++|+ .||+++++.++.+.. .++. .++|.|+++..+.
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~I~vv~~~~~~~~ 62 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPV---YDKPMIYYPLSTLML---------------AGIR-EILIISTPQDTPR 62 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHH
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeE---CCEeHHHHHHHHHHH---------------CCCC-EEEEEeccccHHH
Confidence 4678999999999998 4679999999 899999999888763 1221 2355676777788
Q ss_pred HHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCC
Q 016006 96 TRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVD 175 (397)
Q Consensus 96 t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vD 175 (397)
+++++.+...||+ ++.+..|+ .|.|.++.+.... +.+ +-+.+.++.+|
T Consensus 63 i~~~l~~g~~~g~---~i~~~~~~---------------------~~~G~~~al~~a~-----~~i---~~~~~~lv~gD 110 (293)
T 1fxo_A 63 FQQLLGDGSNWGL---DLQYAVQP---------------------SPDGLAQAFLIGE-----SFI---GNDLSALVLGD 110 (293)
T ss_dssp HHHHHTTSGGGTC---EEEEEECS---------------------SCCCGGGHHHHTH-----HHH---TTSEEEEEETT
T ss_pred HHHHHhcccccCc---eEEEeeCC---------------------CCCCHHHHHHHHH-----HHh---CCCCEEEEECC
Confidence 9999987555665 34443333 3788888776542 222 22556667799
Q ss_pred CccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceee
Q 016006 176 NALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCL 255 (397)
Q Consensus 176 N~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~ 255 (397)
|++....-..++..+.+.+.++.+-+.+-.+| ++.|++..+ ++|+ ++.+.|-|.. + .. +..|+++
T Consensus 111 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp-~~~g~v~~d-~~g~--v~~~~ekp~~-------~--~s--~~~~~Gi 175 (293)
T 1fxo_A 111 NLYYGHDFHELLGSASQRQTGASVFAYHVLDP-ERYGVVEFD-QGGK--AISLEEKPLE-------P--KS--NYAVTGL 175 (293)
T ss_dssp EEEECTTHHHHHHHHHTCCSSEEEEEEECSCG-GGSEEEEEC-TTSC--EEEEEESCSS-------C--SS--SEEEEEE
T ss_pred hhccCccHHHHHHHHHhcCCCcEEEEEECCCc-ccCcEEEEC-CCCc--EEEEEECCCC-------C--CC--CeEEEEE
Confidence 99744222235666655566666655555555 457887765 3564 4555554321 0 11 2468889
Q ss_pred eEeehHHHHHHh
Q 016006 256 HMFTLDFLNQVA 267 (397)
Q Consensus 256 ~~~~l~~L~~~~ 267 (397)
++|+.+.++.+.
T Consensus 176 y~~~~~~l~~~~ 187 (293)
T 1fxo_A 176 YFYDQQVVDIAR 187 (293)
T ss_dssp EEECTTHHHHHH
T ss_pred EEEcHHHHHHHH
Confidence 999998876553
No 14
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.12 E-value=8.2e-10 Score=106.84 Aligned_cols=181 Identities=17% Similarity=0.209 Sum_probs=118.0
Q ss_pred EEEEEecCCCCCcCC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHH
Q 016006 20 LAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 96 (397)
Q Consensus 20 vavviLaGG~GTRLg---~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t 96 (397)
+.+||||||.||||+ ...||.++|+ .||+++++.++.+.. .++. .++|.|+++..+.+
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~I~vv~~~~~~~~i 64 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPI---YDKPMIYYPLSVLML---------------AGIR-EILIITTPEDKGYF 64 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHHH
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEE---CCeeHHHHHHHHHHh---------------CCCC-cEEEEechhHHHHH
Confidence 568999999999998 6789999999 899999999888763 1221 23556666777889
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCC
Q 016006 97 RKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 176 (397)
Q Consensus 97 ~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN 176 (397)
++++.+...||+ ++.+..|+ .|.|.++.+.... +.+ . . +.+.+++.||
T Consensus 65 ~~~l~~g~~~g~---~i~~~~~~---------------------~~~G~~~al~~a~-----~~i-~-~-~~~~lv~gD~ 112 (296)
T 1mc3_A 65 QRLLGDGSEFGI---QLEYAEQP---------------------SPDGLAQAFIIGE-----TFL-N-G-EPSCLVLGDN 112 (296)
T ss_dssp HHHHTTSGGGTC---EEEEEECS---------------------SCCCSTHHHHHTH-----HHH-T-T-SCEEEEETTE
T ss_pred HHHHhcccccCc---eEEEeccC---------------------CCCCHHHHHHHHH-----HHh-C-C-CCEEEEECCc
Confidence 999986555665 34443333 3788887766432 222 1 2 3445555999
Q ss_pred ccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceeee
Q 016006 177 ALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLH 256 (397)
Q Consensus 177 ~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~~ 256 (397)
++....-..++..+.+.+.++.+-+.+..+|. +.|++..+ ++| .|+.+.|-|.. + .. +..|++++
T Consensus 113 ~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~-~yg~v~~d-~~g--~v~~~~ekp~~-------~--~s--~~~~~Giy 177 (296)
T 1mc3_A 113 IFFGQGFSPKLRHVAARTEGATVFGYQVMDPE-RFGVVEFD-DNF--RAISLEEKPKQ-------P--KS--NWAVTGLY 177 (296)
T ss_dssp EEECSSCHHHHHHHTTCCSSEEEEEEECSCCS-SSBBCEEE-TTE--EEEECCBSCSS-------C--SC--SEEEEEEE
T ss_pred cccccCHHHHHHHHHHcCCCCEEEEEECCCcc-cCCEEEEC-CCC--cEEEEEECCCC-------C--CC--CEEEEEEE
Confidence 97543223355666555566666555555564 57887765 345 46677665421 0 11 24688999
Q ss_pred EeehHHHHHH
Q 016006 257 MFTLDFLNQV 266 (397)
Q Consensus 257 ~~~l~~L~~~ 266 (397)
+|+.++++.+
T Consensus 178 ~~~~~~l~~~ 187 (296)
T 1mc3_A 178 FYDSKVVEYA 187 (296)
T ss_dssp ECCTHHHHHH
T ss_pred EEcHHHHHHH
Confidence 9999987654
No 15
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.08 E-value=3.3e-09 Score=102.53 Aligned_cols=183 Identities=16% Similarity=0.158 Sum_probs=116.6
Q ss_pred CEEEEEecCCCCCcCC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHH
Q 016006 19 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 95 (397)
Q Consensus 19 kvavviLaGG~GTRLg---~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~ 95 (397)
.+.+||||||.||||+ ...||.++|+ .||+++++.++.+.. .++. .++|.|+++..+.
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~Iivv~~~~~~~~ 63 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPI---YDKPMIYYPLSVLML---------------AGIR-DILIISTPRDLPL 63 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHH
T ss_pred ceEEEEECCCCCCccccccCCCCceecEE---CCeeHHHHHHHHHHH---------------CCCC-eEEEEeccchHHH
Confidence 3568999999999998 5779999999 799999999888763 1221 2355666677788
Q ss_pred HHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCC
Q 016006 96 TRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVD 175 (397)
Q Consensus 96 t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vD 175 (397)
+++++.+...+|+ ++.+..|+ .|.|.++.+.... +.+ . . +.+.++..|
T Consensus 64 i~~~l~~g~~~g~---~i~~~~~~---------------------~~~G~~~al~~a~-----~~i-~-~-~~~~lv~gD 111 (295)
T 1lvw_A 64 YRDLLGDGSQFGV---RFSYRVQE---------------------EPRGIADAFIVGK-----DFI-G-D-SKVALVLGD 111 (295)
T ss_dssp HHHHHTTSGGGTS---EEEEEECS---------------------SCCCGGGHHHHTH-----HHH-T-T-SCEEEEETT
T ss_pred HHHHhhhccccCc---eEEEeeCC---------------------CCCChHHHHHHHH-----HHh-C-C-CcEEEEECC
Confidence 9999976555665 34443333 3778888776532 222 1 2 334455599
Q ss_pred CccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceee
Q 016006 176 NALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCL 255 (397)
Q Consensus 176 N~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~ 255 (397)
|++....-..++..+.+.+.+..+-+.+..+|. +.|++..+ ++|+ ++.+.|-|.. + +. +..|+++
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~-~~g~v~~d-~~g~--v~~~~ekp~~-------~--~s--~~~~~Gi 176 (295)
T 1lvw_A 112 NVFYGHRFSEILRRAASLEDGAVIFGYYVRDPR-PFGVVEFD-SEGR--VISIEEKPSR-------P--KS--NYVVPGL 176 (295)
T ss_dssp CCEECTTHHHHHHHHHTCCSSEEEEEEECSCCT-TSEEEEEC-TTSB--EEEEEESCSS-------C--SC--SEECCSE
T ss_pred ccccCcCHHHHHHHHHHcCCCcEEEEEECCCcc-cCCEEEEC-CCCc--EEEEEECCCC-------C--CC--CEEEEEe
Confidence 997442222355666555566665555555554 56877665 3564 4555554321 0 11 2468889
Q ss_pred eEeehHHHHHHh
Q 016006 256 HMFTLDFLNQVA 267 (397)
Q Consensus 256 ~~~~l~~L~~~~ 267 (397)
++|+.+.++.+.
T Consensus 177 y~f~~~~l~~~~ 188 (295)
T 1lvw_A 177 YFYDNQVVEIAR 188 (295)
T ss_dssp EEECTTHHHHHH
T ss_pred EEEcHHHHHHHH
Confidence 999998876543
No 16
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.06 E-value=1.2e-09 Score=103.99 Aligned_cols=183 Identities=16% Similarity=0.132 Sum_probs=112.4
Q ss_pred EEEEEecCCCCCcCCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHH
Q 016006 20 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 96 (397)
Q Consensus 20 vavviLaGG~GTRLg~---~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t 96 (397)
+.+||||||.||||+. ..||.++|+ .||+++++.++.+... + +.-++....+..+.+
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~~---------------g--i~~i~vv~~~~~~~i 62 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKEMLPI---VDKPLIQYAVEEAMEA---------------G--CEVMAIVTGRNKRSL 62 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGGGCBS---SSSBHHHHHHHHHHHH---------------T--CCEEEEEECTTHHHH
T ss_pred eEEEEECCcCCcccCccccCCCcccceE---CCEEHHHHHHHHHHhC---------------C--CCEEEEEecCCHHHH
Confidence 4689999999999987 889999999 7999999999988741 1 222444455677899
Q ss_pred HHHHhhcCCCCCCC--------------------CcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCc
Q 016006 97 RKYFEGHKYFGLES--------------------DQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSK 156 (397)
Q Consensus 97 ~~~~~~~~~fgl~~--------------------~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg 156 (397)
.++|.+... ++. .+|.+..| ..|.|+|+......
T Consensus 63 ~~~~~~~~~--l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~---------------------~~~~Gt~~al~~a~--- 116 (281)
T 3juk_A 63 EDYFDTSYE--IEHQIQGTNKENALKSIRNIIEKCCFSYVRQ---------------------KQMKGLGHAILTGE--- 116 (281)
T ss_dssp HHHTSCCC----------CCHHHHHHHHHHHHHHCEEEEEEC---------------------SSCCCHHHHHHHTH---
T ss_pred HHHHhcchh--hhhhhhcccchhhhhhhhccccCccEEEEec---------------------CCCCCcHHHHHHHH---
Confidence 999976322 211 12222222 23788887666532
Q ss_pred hHHHHHHCCceEEEEEcCCCcccccc-----ccccchhhhccCCcEEEEE--eecCCCCcccceEEEeCC--CCceEEEE
Q 016006 157 LLEDMATRGIKYIDCYGVDNALVRVA-----DPTFLGYFIDKGVSAGAKV--VRKAYPQEKVGVFVRRGK--GGPLTVVE 227 (397)
Q Consensus 157 ~l~~l~~~G~eyv~v~~vDN~l~~~~-----Dp~~lg~~~~~~~~~~~kv--~~k~~p~e~vGvl~~~~~--~g~~~vvE 227 (397)
+.+ +-++++|.++|++ .... --.++.++.+.++ ..+.+ ++... ....|++..+ . +|...|.+
T Consensus 117 --~~l---~~~~~lv~~~D~~-~~~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~-~~~~g~v~~~-~~~~g~~~v~~ 187 (281)
T 3juk_A 117 --ALI---GNEPFAVILADDL-CISHDHPSVLKQMTSLYQKYQC-SIVAIEEVALEE-VSKYGVIRGE-WLEEGVYEIKD 187 (281)
T ss_dssp --HHH---CSSCEEEECTTEE-EECTTSCCHHHHHHHHHHHHCS-CEEEEEECCTTT-GGGSEEEEEE-EEETTEEEEEE
T ss_pred --HHc---CCCCEEEEeCCee-ccCccchHHHHHHHHHHHHcCC-CEEEEEEechhh-cccCCEEEec-cCCCCceEEeE
Confidence 223 2378999999995 3433 2225566666665 33333 33232 3456777664 2 35345667
Q ss_pred eccCChhhhhhccCCCCceeeeccceeeeEeehHHHHHH
Q 016006 228 YSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 266 (397)
Q Consensus 228 y~el~~~~~~~~~~~~g~~~f~~~Ni~~~~~~l~~L~~~ 266 (397)
+.|-|.... ...+..|+++++|+.+.++.+
T Consensus 188 ~~Ekp~~~~---------~~~~~~~~GiYi~~~~~l~~l 217 (281)
T 3juk_A 188 MVEKPNQED---------APSNLAVIGRYILTPDIFEIL 217 (281)
T ss_dssp EEESCCTTT---------CSCSEEEEEEEEECTTHHHHH
T ss_pred EEECcCCCC---------CCcceeEEEEEEECHHHHHHH
Confidence 766554210 011346899999999887543
No 17
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.03 E-value=6.4e-09 Score=105.32 Aligned_cols=182 Identities=19% Similarity=0.184 Sum_probs=111.3
Q ss_pred CCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHH
Q 016006 18 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 97 (397)
Q Consensus 18 gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~ 97 (397)
.++.+|+||||.||||+.+.||.++|+ .|++++++.++++... ++. .++|.|. +.++.++
T Consensus 7 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i---~g~pli~~~l~~l~~~---------------~~~-~i~vv~~-~~~~~i~ 66 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYSDLPKVLHPL---AGKPMVQHVIDAAMKL---------------GAQ-HVHLVYG-HGGELLK 66 (459)
T ss_dssp CCEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHHH---------------TCS-CEEEEES-SCHHHHH
T ss_pred CcceEEEECCCCCccCCCCCCcccCee---CCeeHHHHHHHHHHhC---------------CCC-cEEEEeC-CCHHHHH
Confidence 378999999999999999899999999 8999999999987641 111 2355554 4477888
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCc
Q 016006 98 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 177 (397)
Q Consensus 98 ~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~ 177 (397)
+++++. .+.+..|+ .+.|.++...+..+ .+ ..-+++++.+.|.+
T Consensus 67 ~~~~~~--------~~~~v~~~---------------------~~~g~~~~i~~~~~-----~~--~~~~~~lv~~~D~P 110 (459)
T 4fce_A 67 KTLADP--------SLNWVLQA---------------------EQLGTGHAMQQAAP-----HF--ADDEDILMLYGDVP 110 (459)
T ss_dssp HHC-------------CEEECS---------------------SCCCHHHHHHHHGG-----GS--CTTSEEEEEETTCT
T ss_pred HHhccC--------CcEEEeCC---------------------CCCCcHHHHHHHHH-----hc--CCCCcEEEEeCCcc
Confidence 888642 12232221 24566554433221 11 13589999999998
Q ss_pred cccccccc-cchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceeee
Q 016006 178 LVRVADPT-FLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLH 256 (397)
Q Consensus 178 l~~~~Dp~-~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~~ 256 (397)
+....+.. ++..+. ..++++-+++..+|. ..|.+..+ +| .+.++.|-++... .+......|++++
T Consensus 111 ~i~~~~i~~l~~~~~--~~~~~~~~~~~~~~~-~~g~v~~~--~g--~v~~~~ek~~~~~-------~~~~~~~~~~Giy 176 (459)
T 4fce_A 111 LISVDTLQRLLAAKP--EGGIGLLTVKLDNPS-GYGRIVRE--NG--DVVGIVEHKDASD-------AQREINEINTGIL 176 (459)
T ss_dssp TCCHHHHHHHHHHCC--TTSEEEEEEECSCCT-TSCEEEEE--TT--EEEEEECGGGCCT-------TGGGCCEEEEEEE
T ss_pred cCCHHHHHHHHHHHh--hCCEEEEEEecCCCC-cccEEEeC--CC--cEEEEEECCCCCh-------HHhhccEEEEEEE
Confidence 75433222 333332 356666666666554 44777665 56 3556655432111 0111134689999
Q ss_pred EeehHHHHHHhhc
Q 016006 257 MFTLDFLNQVANG 269 (397)
Q Consensus 257 ~~~l~~L~~~~~~ 269 (397)
+|+.++|.++++.
T Consensus 177 ~~~~~~l~~~l~~ 189 (459)
T 4fce_A 177 VANGRDLKRWLSL 189 (459)
T ss_dssp EEEHHHHHHHHHT
T ss_pred EEEHHHHHHHHHH
Confidence 9999999877654
No 18
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.01 E-value=3e-09 Score=103.00 Aligned_cols=208 Identities=14% Similarity=0.096 Sum_probs=122.5
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||+||||+. ||.++|++ +.|++++++.++.+... ++. .++|.|.....+.+++
T Consensus 5 ~~~~vIlAaG~g~R~~~--~K~l~~ig-~~g~pli~~~l~~~~~~---------------~~~-~i~vv~~~~~~~~~~~ 65 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS--LKQLDGIG-PGGDTIMDYSVYDAIRA---------------GFG-RLVFVIRHSFEKEFRE 65 (303)
T ss_dssp CCEEEEECTTCBCTTSS--BCCCCCCS-TTSCCHHHHHHHHHHHH---------------TCC-EEEEEECGGGHHHHHH
T ss_pred ceEEEEECCCCcccCCC--CceEeEcC-CCCeeHHHHHHHHHHHC---------------CCC-eEEEEcCchHHHHHHH
Confidence 56789999999999987 89998874 25899999999887631 111 2355555444589999
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
+|.....++. +|.+..|+..- +.....+... ...|.|+|+.+....+. + -+.++|++.|++.
T Consensus 66 ~~~~~~~~~~---~i~~~~~~~~~-~~~~~~~~~~-----~~~~~Gt~~al~~a~~~-----i----~~~~lV~~gD~l~ 127 (303)
T 3pnn_A 66 KILTKYEGRI---PVELVFQELDR-LPEGFSCPEG-----REKPWGTNHAVLMGRDA-----I----REPFAVINADDFY 127 (303)
T ss_dssp HTHHHHTTTS---CEEEEECCTTC-CCTTCCCCTT-----CCSCCCHHHHHHTTTTT-----C----CSCEEEEESSCBC
T ss_pred HHHHHhccCC---cEEEEeccccc-cccccccccc-----ccccCCcHHHHHHHHHh-----c----CCCEEEEECCeec
Confidence 9976433333 47777776221 1111111110 12488999887765432 1 1567888999964
Q ss_pred cccc-ccccchhhhc---cCCcEEEEEeecCCC-Cccc----ceEEEeCCCCceEEEEeccCChhhhh----hccCCCCc
Q 016006 179 VRVA-DPTFLGYFID---KGVSAGAKVVRKAYP-QEKV----GVFVRRGKGGPLTVVEYSELDPSLAS----AINQETGR 245 (397)
Q Consensus 179 ~~~~-Dp~~lg~~~~---~~~~~~~kv~~k~~p-~e~v----Gvl~~~~~~g~~~vvEy~el~~~~~~----~~~~~~g~ 245 (397)
... --.++.++.+ .++++++-+.+-.+| .+.+ |++..+ ++|+ |+++.|-|+.... ...+..|.
T Consensus 128 -~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~G~v~~d-~~g~--v~~i~Ekp~~~~~~~~~~~~~~~g~ 203 (303)
T 3pnn_A 128 -GRNGFEVLARKLMTLEGKQGEYCMVGYRVGNTLSESGGVSRGVCQVD-EKHL--LTGVVERTGIERTDGTISFRDETGK 203 (303)
T ss_dssp -CHHHHHHHHHHHHTTTTCSSEEEEEEEEGGGSCBTTBCEEEEEEEEC-TTSB--EEEEEEEEEEEEETTEEEEECTTSC
T ss_pred -CHHHHHHHHHHHHHhccccCceEEEEEECCCccCccCceeeeeEeeC-CCCc--EEEEEECCCCccccccccccccccc
Confidence 321 1226677764 567887766666556 4443 565554 3564 4444443321100 00001111
Q ss_pred -e---eeeccceeeeEeehHHHHHHh
Q 016006 246 -L---RFCWSNVCLHMFTLDFLNQVA 267 (397)
Q Consensus 246 -~---~f~~~Ni~~~~~~l~~L~~~~ 267 (397)
. ..+..|+++++|+.++++.+.
T Consensus 204 ~~~~~~~~~i~~GiY~f~~~~~~~l~ 229 (303)
T 3pnn_A 204 ICTLAEDAPVSMNMWGFTPDYFDYSE 229 (303)
T ss_dssp EEEECTTCEEEEEEEEECTHHHHHHH
T ss_pred cccCCCCCEEEEEEEEECHHHHHHHH
Confidence 0 124578999999999876654
No 19
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.01 E-value=1.6e-09 Score=103.29 Aligned_cols=188 Identities=16% Similarity=0.137 Sum_probs=117.5
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ +|.+.|+ .||+++++.++++.. .++. .++|-| .++.+.+
T Consensus 18 ~~~aIIlA~G~stRlp---~K~L~~i---~GkPmi~~~l~~l~~---------------~~i~-~IvV~t---~~~~i~~ 72 (264)
T 3k8d_A 18 SFVVIIPARYASTRLP---GKPLVDI---NGKPMIVHVLERARE---------------SGAE-RIIVAT---DHEDVAR 72 (264)
T ss_dssp CCEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHH---------------TTCS-EEEEEE---SCHHHHH
T ss_pred ceEEEEEcCCCCCCCC---CcceeeE---CCeEHHHHHHHHHHh---------------CCCC-EEEEEC---CHHHHHH
Confidence 5789999999999994 5999999 899999999998763 1211 235555 2578888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ ||.+ +.+-.| ..|.|+|++..++. .+...+.++++++++|++|
T Consensus 73 ~~~~---~g~~---v~~~~~---------------------~~~~Gt~~i~~~~~------~l~~~~~d~vlv~~gD~Pl 119 (264)
T 3k8d_A 73 AVEA---AGGE---VCMTRA---------------------DHQSGTERLAEVVE------KCAFSDDTVIVNVQGDEPM 119 (264)
T ss_dssp HHHH---TTCE---EEECCT---------------------TCCSHHHHHHHHHH------HHTCCTTCEEEEECTTCTT
T ss_pred HHHH---cCCE---EEEecC---------------------CCCCCHHHHHHHHH------HhccCCCCEEEEEcCCccc
Confidence 8875 4532 221111 24778888666542 2322356899999999998
Q ss_pred ccccccc-cchhhhccCCcEEEEEeecCCCCcc-----cceEEEeCCCCceEEEEeccCCh-hhhhhccCCCCce-eeec
Q 016006 179 VRVADPT-FLGYFIDKGVSAGAKVVRKAYPQEK-----VGVFVRRGKGGPLTVVEYSELDP-SLASAINQETGRL-RFCW 250 (397)
Q Consensus 179 ~~~~Dp~-~lg~~~~~~~~~~~kv~~k~~p~e~-----vGvl~~~~~~g~~~vvEy~el~~-~~~~~~~~~~g~~-~f~~ 250 (397)
....+.. ++..+.+.++++++-+++-.++.+. ++|+ .+ ++|+ ++.+++-+. ..+........+. .-+.
T Consensus 120 i~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv-~d-~~g~--~l~fsr~~ip~~r~~~~~~~~~~~~~~~ 195 (264)
T 3k8d_A 120 IPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVV-LD-AEGY--ALYFSRATIPWDRDRFAEGLETVGDNFL 195 (264)
T ss_dssp CCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEE-EC-TTSB--EEEEESSCCSCCHHHHHHCSSCCCSCCE
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEE-EC-CCCe--EEEEecCCCCCCCccccccccccCCcce
Confidence 5433322 4555666788888777665443331 2443 33 4674 577877542 1111000000001 1134
Q ss_pred cceeeeEeehHHHHHHhh
Q 016006 251 SNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 251 ~Ni~~~~~~l~~L~~~~~ 268 (397)
.|++++.|+.++|+++..
T Consensus 196 ~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 196 RHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp EECSEEEEEHHHHHHHHH
T ss_pred EEEEEEEECHHHHHHHHh
Confidence 799999999999998865
No 20
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.98 E-value=1.8e-08 Score=102.52 Aligned_cols=181 Identities=16% Similarity=0.140 Sum_probs=113.3
Q ss_pred EEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHHHH
Q 016006 21 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYF 100 (397)
Q Consensus 21 avviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~~~ 100 (397)
.+|+||||.||||+.+.||.++|+ .||+++++.++++.+ .++. .++|.| .+..+.+.+++
T Consensus 13 ~~vIlAaG~g~R~~~~~pK~l~~i---~gkpli~~~l~~l~~---------------~g~~-~iivv~-~~~~~~i~~~~ 72 (468)
T 1hm9_A 13 FAIILAAGKGTRMKSDLPKVLHKV---AGISMLEHVFRSVGA---------------IQPE-KTVTVV-GHKAELVEEVL 72 (468)
T ss_dssp EEEEECCCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHT---------------TCCS-EEEEEE-CTTHHHHHHSS
T ss_pred cEEEEcCCCCccCCCCCCcEeeEE---CCccHHHHHHHHHHh---------------cCCC-CEEEEE-CCCHHHHHHHh
Confidence 478999999999998889999999 899999999888762 1211 234444 44456666665
Q ss_pred hhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcccc
Q 016006 101 EGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVR 180 (397)
Q Consensus 101 ~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l~~ 180 (397)
++ .+.+..|+ .+.|.++.+... ++.+. ..-+++++.+.|+++..
T Consensus 73 ~~---------~i~~v~~~---------------------~~~G~~~sl~~a-----~~~~~-~~~~~vlv~~~D~P~i~ 116 (468)
T 1hm9_A 73 AG---------QTEFVTQS---------------------EQLGTGHAVMMT-----EPILE-GLSGHTLVIAGDTPLIT 116 (468)
T ss_dssp SS---------SSEEEECS---------------------SCCCHHHHHHTT-----HHHHT-TCCSEEEEEETTCTTCC
T ss_pred CC---------CcEEEeCC---------------------ccCChHHHHHHH-----HHHhc-cCCCeEEEEeCCccccC
Confidence 43 23332222 255766655433 23332 22479999999998754
Q ss_pred ccccc-cchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceeeeEee
Q 016006 181 VADPT-FLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFT 259 (397)
Q Consensus 181 ~~Dp~-~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~~~~~ 259 (397)
..+.. ++..+.+.++++++-+.+..+|. ..|.+..+ ++|+ ++++.|-++... ........|+++++|+
T Consensus 117 ~~~i~~l~~~~~~~~~~~~i~~~~~~~~~-~~g~v~~d-~~g~--v~~~~ek~~~~~-------~~~~~~~~~~Giy~f~ 185 (468)
T 1hm9_A 117 GESLKNLIDFHINHKNVATILTAETDNPF-GYGRIVRN-DNAE--VLRIVEQKDATD-------FEKQIKEINTGTYVFD 185 (468)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEECSCCT-TSCEEEEC-TTCC--EEEEECTTTCCT-------TGGGCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeccCCCC-ceeEEEEC-CCCC--EEEEEECCCCCh-------HHhcCeEEEEEEEEEE
Confidence 33332 55666667888877666665554 45776654 3563 566665432100 0111134688899999
Q ss_pred hHHHHHHhh
Q 016006 260 LDFLNQVAN 268 (397)
Q Consensus 260 l~~L~~~~~ 268 (397)
.+.|.+.++
T Consensus 186 ~~~l~~~l~ 194 (468)
T 1hm9_A 186 NERLFEALK 194 (468)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 998866654
No 21
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.97 E-value=2.3e-08 Score=101.21 Aligned_cols=181 Identities=17% Similarity=0.157 Sum_probs=109.8
Q ss_pred CCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHH
Q 016006 18 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 97 (397)
Q Consensus 18 gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~ 97 (397)
.++.+|+||||.||||+.+.||.++|+ .|++++++.++++... ++. .++|.|. +..+.+.
T Consensus 4 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i---~gkpli~~~l~~l~~~---------------~~~-~iivv~~-~~~~~i~ 63 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYSDLPKVLHTI---AGKPMVKHVIDTAHQL---------------GSE-NIHLIYG-HGGDLMR 63 (456)
T ss_dssp CCEEEEEECCCCCGGGCSSSCGGGSEE---TTEEHHHHHHHHHHHT---------------TCS-CEEEEEC-TTHHHHH
T ss_pred CcceEEEECCCCCcccCCCCCccccEE---CCccHHHHHHHHHHhC---------------CCC-cEEEEeC-CCHHHHH
Confidence 368899999999999998889999999 8999999999887631 111 1244554 4457788
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCc
Q 016006 98 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 177 (397)
Q Consensus 98 ~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~ 177 (397)
+++.+. + +.+..|+ .+.|.++......+ .+ ..-+++++.+.|++
T Consensus 64 ~~~~~~---~-----~~~v~~~---------------------~~~g~~~~~~~~~~-----~~--~~~~~vlv~~~D~P 107 (456)
T 2v0h_A 64 THLANE---Q-----VNWVLQT---------------------EQLGTAHAVQQAAP-----FF--KDNENIVVLYGDAP 107 (456)
T ss_dssp HHTTTC---C-----CEEEECS---------------------CCCCHHHHHHHHGG-----GC--CTTSEEEEEETTCT
T ss_pred HHhhcC---C-----cEEEeCC---------------------CCCCcHHHHHHHHH-----hc--CCCCeEEEEcCCcc
Confidence 877642 2 3333221 25566554443321 11 12579999999998
Q ss_pred cccccccc-cchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceeee
Q 016006 178 LVRVADPT-FLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLH 256 (397)
Q Consensus 178 l~~~~Dp~-~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~~ 256 (397)
+....+.. ++..+.+ .++++-+.+..+|.. .|.+..+ +|+ +.++.|-++..... ......|++++
T Consensus 108 ~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~-~g~v~~~--~g~--v~~~~ek~~~~~~~-------~~~~~~~~Giy 173 (456)
T 2v0h_A 108 LITKETLEKLIEAKPE--NGIALLTVNLDNPTG-YGRIIRE--NGN--VVAIVEQKDANAEQ-------LNIKEVNTGVM 173 (456)
T ss_dssp TCCHHHHHHHHHHCCT--TSEEEEEEECSSCTT-SCEEEEE--TTE--EEEEECTTTCCHHH-------HTCCEEEEEEE
T ss_pred eeCHHHHHHHHHHHhc--CCEEEEEeecCCCCc-cceEEEc--CCc--EEEEEECCCCChhH-------hcCcEEEEEEE
Confidence 75433332 3444433 566655555555533 4666654 453 44554433211000 00134688999
Q ss_pred EeehHHHHHHhh
Q 016006 257 MFTLDFLNQVAN 268 (397)
Q Consensus 257 ~~~l~~L~~~~~ 268 (397)
+|+.+.|.+.++
T Consensus 174 ~~~~~~l~~~l~ 185 (456)
T 2v0h_A 174 VSDGASFKKWLA 185 (456)
T ss_dssp EEEHHHHHHHHT
T ss_pred EEEHHHHHHHHH
Confidence 999998876654
No 22
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=98.95 E-value=2.1e-09 Score=101.96 Aligned_cols=187 Identities=18% Similarity=0.186 Sum_probs=110.2
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ ||.+.|| .||+++++.++++.+. ++. .++|-|. ++.+.+
T Consensus 9 ~~~aIIlA~G~stRl~---~K~L~~i---~GkPli~~~l~~l~~~---------------~i~-~VvVvt~---~~~i~~ 63 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP---GKALVDI---AGKPMIQHVYESAIKS---------------GAE-EVVIATD---DKRIRQ 63 (256)
T ss_dssp CCEEEEECCCC---CT---TGGGCEE---TTEEHHHHHHHHHHHT---------------TCS-EEEEEES---CHHHHH
T ss_pred CceEEEEcCCCCCCCC---CCCeeeE---CCchHHHHHHHHHHhC---------------CCC-EEEEECC---HHHHHH
Confidence 6789999999999997 8999999 8999999999987631 111 2244453 588899
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ ||.+ +.+-. ...|.|++.+..++. .+...+.++++++++|+++
T Consensus 64 ~~~~---~g~~---v~~~~---------------------~~~~~Gt~~i~~a~~------~l~~~~~d~vlv~~gD~Pl 110 (256)
T 3tqd_A 64 VAED---FGAV---VCMTS---------------------SDHQSGTERIAEAAV------ALGFEDDEIIVCLQGDEPL 110 (256)
T ss_dssp HHHH---TTCE---EEECC---------------------TTCCSHHHHHHHHHH------HTTCCTTCEEEEECTTCCC
T ss_pred HHHH---cCCe---EEEeC---------------------CCCCCcHHHHHHHHH------HhCcCCCCEEEEEeCCccc
Confidence 8875 5542 22211 124778887666552 2211356899999999998
Q ss_pred ccccccc-cchhhhc-cCCcEEEEEeecCCCCc-----ccceEEEeCCCCceEEEEeccCChhhhhhccC----CCCcee
Q 016006 179 VRVADPT-FLGYFID-KGVSAGAKVVRKAYPQE-----KVGVFVRRGKGGPLTVVEYSELDPSLASAINQ----ETGRLR 247 (397)
Q Consensus 179 ~~~~Dp~-~lg~~~~-~~~~~~~kv~~k~~p~e-----~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~----~~g~~~ 247 (397)
....+.. ++..+.+ .++++++-+++-.++.+ .++|++ + ++|+ ++.+++-+-....+... ......
T Consensus 111 i~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~-d-~~g~--~l~fsr~pip~~r~~~~~~~~~~~~~~ 186 (256)
T 3tqd_A 111 IPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVL-N-RRNY--ALYFSHAPIPWGRDTFSDKENLQLNGS 186 (256)
T ss_dssp CCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEE-C-TTSB--EEEEESSCSSCCTTTTTCGGGCCCSSC
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEE-C-CCCE--EeEEecCCCCCCCcccccccccccCCc
Confidence 5332222 3444444 35666655554322211 245543 3 4674 56777654321110000 000112
Q ss_pred eeccceeeeEeehHHHHHHhh
Q 016006 248 FCWSNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 248 f~~~Ni~~~~~~l~~L~~~~~ 268 (397)
+..|+++|.|+.++|+++..
T Consensus 187 -~~~~~GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 187 -HYRHVGIYAYRVGFLEEYLS 206 (256)
T ss_dssp -CEEEEEEEEEEHHHHHHHHH
T ss_pred -ceEEEEEEEcCHHHHHHHHh
Confidence 24799999999999998865
No 23
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.94 E-value=1.1e-08 Score=102.94 Aligned_cols=198 Identities=13% Similarity=0.231 Sum_probs=119.7
Q ss_pred CEEEEEecCCCCCcCC---CCCCCccccccCCCCC-ChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchH
Q 016006 19 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGK-SLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 94 (397)
Q Consensus 19 kvavviLaGG~GTRLg---~~~PKg~~~i~l~~~k-sll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~ 94 (397)
++.+||||||.||||+ .+.||.++|+ .|+ +++++.++++.+ .++. .++|.| .+..+
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi---~gk~pli~~~l~~l~~---------------~gi~-~i~vv~-~~~~~ 71 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYF---GGKARIIDFALSNALN---------------SGIR-RIGVAT-QYKAH 71 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEE---TTTEETHHHHHHHHHH---------------TTCC-EEEEEE-CTTCH
T ss_pred ceEEEEEcCCCCCccchhhcCCccccccc---CCCCcHHHHHHHHHHh---------------CCCC-eEEEEe-CCChH
Confidence 5789999999999998 7789999999 799 999999988863 1211 224444 45668
Q ss_pred HHHHHHhhcCCCCCCC----CcEEEEEcCCeeeeecCCcccccCCCcccccc---CCCchHhHHHhhCchHHHHHHCCce
Q 016006 95 ATRKYFEGHKYFGLES----DQVTFFQQGTIPCVSKDGRFIMETPYKVAKAP---DGNGGVYSALKSSKLLEDMATRGIK 167 (397)
Q Consensus 95 ~t~~~~~~~~~fgl~~----~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P---~G~Ggi~~~L~~sg~l~~l~~~G~e 167 (397)
.+.+++++. ||++. ..+.+. . +......| .|+++..... ++.+...+.+
T Consensus 72 ~i~~~~~~~--~~~~~~~~~~~v~i~--------~---------~~~~~~~~~~~~Gt~~al~~a-----~~~l~~~~~~ 127 (420)
T 3brk_X 72 SLIRHLQRG--WDFFRPERNESFDIL--------P---------ASQRVSETQWYEGTADAVYQN-----IDIIEPYAPE 127 (420)
T ss_dssp HHHHHHHHH--SCCCCGGGTCEEEEE--------C---------CC-------CCCCHHHHHHTT-----HHHHHHHCCS
T ss_pred HHHHHHhhh--hccccccccCCEEEe--------C---------ccccccCCccccCCHHHHHHH-----HHHHHhcCCC
Confidence 899999763 55531 122221 0 00000013 6777666543 3344433457
Q ss_pred EEEEEcCCCccccccccccchhhhccCCcEEEEEeecC-CCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCce
Q 016006 168 YIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKA-YPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRL 246 (397)
Q Consensus 168 yv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~-~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~ 246 (397)
++++++.|++. ...--.++..+.+.++++++-+.+.. .+....|++..+ ++|+ |+++.|-|........ ..
T Consensus 128 ~~lv~~~D~~~-~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d-~~g~--v~~~~ekp~~~~~~~~----~~ 199 (420)
T 3brk_X 128 YMVILAGDHIY-KMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVN-EKDE--IIDFIEKPADPPGIPG----NE 199 (420)
T ss_dssp EEEEEESSCEE-CBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEEC-TTSB--EEEEEESCSSCCCBTT----BT
T ss_pred EEEEecccEEE-chHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEEC-CCCc--EEEeEeCCCccccccc----cc
Confidence 89999999963 32222367777777888876655431 123356777664 3453 4556554321100000 00
Q ss_pred eeeccceeeeEeehHHHHHHhh
Q 016006 247 RFCWSNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 247 ~f~~~Ni~~~~~~l~~L~~~~~ 268 (397)
..+..|+++++|+.++|.+.++
T Consensus 200 ~~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 200 GFALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp TEEEEEEEEEEEEHHHHHHHHT
T ss_pred cceEEeeeeEEEeHHHHHHHHH
Confidence 1235789999999998876654
No 24
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=98.94 E-value=1.6e-09 Score=102.38 Aligned_cols=172 Identities=13% Similarity=0.143 Sum_probs=101.9
Q ss_pred EEEecCCCCCcCC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 22 VLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 22 vviLaGG~GTRLg---~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
+||||||+||||+ .+.||.|+|+ .||+++++.++.+... .++. .++|.+ .+.++ +.+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv---~gkpli~~~l~~l~~~--------------~gi~-~iivv~-~~~~~-~~~ 61 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEA---HGQTLFEHSVNSFAAY--------------FAST-PFLFIV-RNVYD-TAV 61 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEE---TTEEHHHHHHGGGGGG--------------TTTS-CEEEEE-ESSTT-HHH
T ss_pred EEEEcCCCCcccccCCCCCCccccEE---CCeEHHHHHHHHHhcc--------------CCCc-eEEEEE-Cchhh-hHH
Confidence 6899999999996 4789999999 8999999988877520 0111 123344 34444 555
Q ss_pred HHhhc-CCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHH---CCceEEEEEcC
Q 016006 99 YFEGH-KYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT---RGIKYIDCYGV 174 (397)
Q Consensus 99 ~~~~~-~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~---~G~eyv~v~~v 174 (397)
+++++ ..+|.+... .+..|+ .|.|+|+...... +.+.+ .+-+.++|.++
T Consensus 62 ~~~~~~~~~~~~~~~-~~~~~~---------------------~~~Gt~~av~~a~-----~~l~~~~~~~~~~~lV~~g 114 (255)
T 4evw_A 62 FVREKATQLGIKQFY-IAELHT---------------------ETRGQAETVTLGL-----EELAKQGVDYQGSITVFNI 114 (255)
T ss_dssp HHHHHHHHHTCSSEE-EEEESS---------------------CCSSHHHHHHHHH-----HHHHHTTCCCCSCEEECCT
T ss_pred HHHHHHHHcCCCCce-EEEeCC---------------------CCCCHHHHHHHHH-----HHHhhcccCCCCcEEEEeC
Confidence 65542 123432111 223232 4789888777642 23321 23456999999
Q ss_pred CCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeecccee
Q 016006 175 DNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 254 (397)
Q Consensus 175 DN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~ 254 (397)
|++. ...+ +-.+ ..+++..+-+.+..+| ..|++..+ .+|...|+++.|-++. + +..|++
T Consensus 115 D~l~-~~~~--~~~~--~~~~~~~i~~~~~~~p--~yG~v~~d-~~g~~~V~~i~EK~~~-------s------~~~~~G 173 (255)
T 4evw_A 115 DTFR-PNFV--FPDI--SQHSDGYLEVFQGGGD--NWSFAKPE-HAGSTKVIQTAEKNPI-------S------DLCSTG 173 (255)
T ss_dssp TEEC-TTCC--CCGG--GGSSSEEEEEEECCSS--CSCEEEES-STTCCBEEEEESSSCS-------S------SEEEEE
T ss_pred CEEE-ecch--hHHH--hhcCCcEEEEEecCCC--ceeEEEEC-CCCCeEEEEEEeccCc-------c------CcEEEe
Confidence 9964 3222 2222 2456666555554444 67888775 3452346676654111 1 247899
Q ss_pred eeEeehH
Q 016006 255 LHMFTLD 261 (397)
Q Consensus 255 ~~~~~l~ 261 (397)
+++|+..
T Consensus 174 iY~f~~~ 180 (255)
T 4evw_A 174 LYHFNRK 180 (255)
T ss_dssp EEEESCH
T ss_pred EEEECcH
Confidence 9999975
No 25
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=98.92 E-value=1e-08 Score=99.40 Aligned_cols=191 Identities=18% Similarity=0.165 Sum_probs=108.7
Q ss_pred CEEEEEecCCCCCcCC--C--CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchH
Q 016006 19 KLAVLLLSGGQGTRLG--S--SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 94 (397)
Q Consensus 19 kvavviLaGG~GTRLg--~--~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~ 94 (397)
++.+||||||.||||+ . ..||.++|+. .|+|++++.++++... + -.++|.|.....+
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~--gg~pli~~~l~~l~~~----------------~-~~i~vv~~~~~~~ 64 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLF--DHKSLFELSFKRNASL----------------V-DETLIVCNEKHYF 64 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTB--TTBCHHHHHHHHHHTT----------------C-SEEEEEEEGGGHH
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECC--CCCCHHHHHHHHHHcc----------------C-CCEEEEEChhHHH
Confidence 5778999999999996 2 5799998872 3899999999887631 1 1246666665557
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcC
Q 016006 95 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 174 (397)
Q Consensus 95 ~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~v 174 (397)
.+.+++++. ||++ ++.+..|+ .|.|+|+.+...... + ..-++++|.+.
T Consensus 65 ~i~~~~~~~--~~~~--~~~~i~~~---------------------~~~gt~~al~~a~~~-----l--~~~~~~lv~~~ 112 (308)
T 2qh5_A 65 LALEEIKNE--IKNK--SVGFLLES---------------------LSKNTANAIALSALM-----S--DKEDLLIVTPS 112 (308)
T ss_dssp HHHHHTTTT--CSSC--EEEEEEES---------------------SCCCHHHHHHHHHHT-----S--CTTSEEEEEES
T ss_pred HHHHHHHHh--hCCC--ccEEEeCC---------------------CCCChHHHHHHHHHH-----h--CCCCeEEEEcC
Confidence 888888753 5542 34443332 367888886654321 1 12357999999
Q ss_pred CCcccccc-ccccchh---hhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhh-hhhccCCCCceeee
Q 016006 175 DNALVRVA-DPTFLGY---FIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSL-ASAINQETGRLRFC 249 (397)
Q Consensus 175 DN~l~~~~-Dp~~lg~---~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~-~~~~~~~~g~~~f~ 249 (397)
|+++.... --.++.. +.+.++++++.+.+. .+....|++... .+| .|+++.|-|... +.... ..|. .
T Consensus 113 D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~~~~g~i~~d-~~~--~V~~~~Ekp~~~~~~~~~-~~g~---~ 184 (308)
T 2qh5_A 113 DHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSID-KPNTEFGYIESP-NGL--DVKRFIEKPSLDKAIEFQ-KSGG---F 184 (308)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECS-SCCTTSEEEECS-SSS--BCSEEEESCCHHHHHHHH-HHCC---E
T ss_pred CccccCHHHHHHHHHHHHHHHhcCCEEEEEEecC-CCCCCceEEEEC-CCC--EEEEEEECCChHHHHHHh-hcCC---e
Confidence 99863221 1224444 445677777666554 345567877643 234 345555544321 11100 0111 2
Q ss_pred ccceeeeEeehHHHHHHhh
Q 016006 250 WSNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 250 ~~Ni~~~~~~l~~L~~~~~ 268 (397)
..|+++++|+.+++.+.+.
T Consensus 185 ~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 185 YFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp EEEEEEEEEEHHHHHHHHH
T ss_pred EEEeEEEEEEHHHHHHHHH
Confidence 4689999999887644443
No 26
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=98.92 E-value=5.9e-09 Score=97.53 Aligned_cols=191 Identities=17% Similarity=0.215 Sum_probs=109.5
Q ss_pred EEEEEecCCCCCcCCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHH
Q 016006 20 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 96 (397)
Q Consensus 20 vavviLaGG~GTRLg~---~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t 96 (397)
+.+||||||.||||+. +.||.++|+ .|++++++.++++.+ .++. .++|.|+ +.++.+
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i---~gkpli~~~l~~l~~---------------~g~~-~i~vv~~-~~~~~i 62 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEI---GGKPILWHIMKMYSV---------------HGIK-DFIICCG-YKGYVI 62 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEEC-TTHHHH
T ss_pred cEEEEECCCCcccCCCccCCCCccccEE---CCEEHHHHHHHHHHH---------------CCCC-EEEEEcc-cCHHHH
Confidence 5689999999999986 779999999 799999999888763 1211 2355554 456889
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCcc----ccccCCCchHhHHHhhCchHHHHHHCCceEEEEE
Q 016006 97 RKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKV----AKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCY 172 (397)
Q Consensus 97 ~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i----~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~ 172 (397)
++++.+...++ .++.+..|+.--.+- .+ ...++.+ ...+.|+|+.+...... + . +-+++.+.
T Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~---~~~~~~v~~~~~~~~~gt~~al~~a~~~-----~-~-~~~~~lv~ 128 (259)
T 1tzf_A 63 KEYFANYFLHM---SDVTFHMAENRMEVH-HK---RVEPWNVTLVDTGDSSMTGGRLKRVAEY-----V-K-DDEAFLFT 128 (259)
T ss_dssp HHHHHTHHHHH---SCEEEEGGGTEEEET-TC---CCCCCEEEEEECCSSCCHHHHHHHTGGG-----T-T-TSSCEEEE
T ss_pred HHHHhhccccc---ccccccccccceeee-ec---cccccceeeeecccccCcHHHHHHHHHh-----c-C-CCCcEEEE
Confidence 99997632110 123333332100000 00 0011211 12478898887654331 1 1 34788999
Q ss_pred cCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccc
Q 016006 173 GVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSN 252 (397)
Q Consensus 173 ~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~N 252 (397)
+.|++. ...-..++..+...++++++..++ +....|++..+ +| .|+++.|-|.. . ....|
T Consensus 129 ~~D~~~-~~~~~~~~~~~~~~~~~~t~~~~~---~~~~~g~v~~~--~g--~v~~~~ekp~~--------~----~~~~~ 188 (259)
T 1tzf_A 129 YGDGVA-DLDIKATIDFHKAHGKKATLTATF---PPGRFGALDIQ--AG--QVRSFQEKPKG--------D----GAMIN 188 (259)
T ss_dssp ETTEEE-CCCHHHHHHHHHHHCCSEEEEEEC---CCCCSEEEEEE--TT--EEEEEEESCSC--------C----SCCEE
T ss_pred ECCEec-ccCHHHHHHHHHHhCCeEEEEEec---CCCCccEEEEc--CC--EEEEEEecCCC--------C----CceEE
Confidence 999963 322223667777777777654332 23456777665 56 45677664321 0 12468
Q ss_pred eeeeEeehHHHH
Q 016006 253 VCLHMFTLDFLN 264 (397)
Q Consensus 253 i~~~~~~l~~L~ 264 (397)
+++++|+.++++
T Consensus 189 ~Giy~~~~~~l~ 200 (259)
T 1tzf_A 189 GGFFVLNPSVID 200 (259)
T ss_dssp CCCEEECGGGGG
T ss_pred EEEEEeCHHHHH
Confidence 889999998873
No 27
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.86 E-value=9.2e-09 Score=104.41 Aligned_cols=211 Identities=14% Similarity=0.226 Sum_probs=114.1
Q ss_pred CEEEEEecCCCCCcCC---CCCCCccccccCCCCC-ChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchH
Q 016006 19 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGK-SLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 94 (397)
Q Consensus 19 kvavviLaGG~GTRLg---~~~PKg~~~i~l~~~k-sll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~ 94 (397)
++.+|+||||.||||+ .+.||.|+|+ .|+ +++++.++++.+ .++. .++|.| .+.++
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~llpi---~g~~pli~~~l~~l~~---------------~g~~-~i~vv~-~~~~~ 79 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN---------------SNIS-KIYVLT-QFNSA 79 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGGGCEE---TTTEETTHHHHHHHHH---------------TTCC-EEEEEE-SCCCH
T ss_pred ceEEEEECCCCCCcccchhcCCcceeeEE---CCcceeHHHHHHHHHH---------------CCCC-EEEEEe-ccCHH
Confidence 4779999999999998 6789999999 798 999999888763 1211 234444 45677
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcC
Q 016006 95 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 174 (397)
Q Consensus 95 ~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~v 174 (397)
.+.+++.+. +|.+-. .++.++.+..+..+- .+ .-...+.|+|+..... ++.+...+-++++|++.
T Consensus 80 ~i~~~~~~~--~~~~~~--~~~~~~~v~i~~~~~-----~~-~~~~~~~Gt~~al~~a-----~~~~~~~~~~~~lv~~~ 144 (451)
T 1yp2_A 80 SLNRHLSRA--YASNMG--GYKNEGFVEVLAAQQ-----SP-ENPDWFQGTADAVRQY-----LWLFEEHTVLEYLILAG 144 (451)
T ss_dssp HHHHHHHHH--CC----------CCEEEEEESCS-----ST-TSCCCCCSHHHHHHHT-----HHHHTTSCCSEEEEECS
T ss_pred HHHHHHhhh--hhcccc--cccccCcEEEecccc-----cc-cccccccCcHHHHHHH-----HHHHHhcCCCeEEEecC
Confidence 888888752 221100 001111111111000 00 0011256887766543 23333234689999999
Q ss_pred CCccccccccccchhhhccCCcEEEEEeecC-CCCcccceEEEeCCCCceEEEEeccCChhh-hhhccCCC---C-----
Q 016006 175 DNALVRVADPTFLGYFIDKGVSAGAKVVRKA-YPQEKVGVFVRRGKGGPLTVVEYSELDPSL-ASAINQET---G----- 244 (397)
Q Consensus 175 DN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~-~p~e~vGvl~~~~~~g~~~vvEy~el~~~~-~~~~~~~~---g----- 244 (397)
|++. ...-..++.++.+.++++++-+.+.. .+....|++..+ ++| +|+++.|-|+.. +....-+. +
T Consensus 145 D~~~-~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d-~~~--~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~ 220 (451)
T 1yp2_A 145 DHLY-RMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKID-EEG--RIIEFAEKPQGEQLQAMKVDTTILGLDDKR 220 (451)
T ss_dssp CEEC-CCCHHHHHHHHHHTTCSEEEEEEEECHHHHTTSEEEEEC-TTS--BEEEEEESCCHHHHHHTCCCGGGGSCCHHH
T ss_pred cEEE-cCCHHHHHHHHHHcCCcEEEEEEEcChhhcccCCEEEEC-CCC--CEEEEEECCCchhhcccccccccccccccc
Confidence 9953 43223477777778888876544432 012345777665 345 456776665431 11000000 0
Q ss_pred -ceeeeccceeeeEeehHHHHHHhh
Q 016006 245 -RLRFCWSNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 245 -~~~f~~~Ni~~~~~~l~~L~~~~~ 268 (397)
.......|+++++|+.++|.++++
T Consensus 221 ~~~~~~~~~~Giy~~~~~~l~~~l~ 245 (451)
T 1yp2_A 221 AKEMPFIASMGIYVISKDVMLNLLR 245 (451)
T ss_dssp HHHCCEEEEEEEEEEEHHHHHHHHH
T ss_pred ccCCcceEEeeEEEEcHHHHHHHHH
Confidence 001234699999999998877654
No 28
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=98.77 E-value=5.5e-08 Score=93.52 Aligned_cols=184 Identities=15% Similarity=0.112 Sum_probs=110.7
Q ss_pred CEEEEEecCCCCCcCCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHH
Q 016006 19 KLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 95 (397)
Q Consensus 19 kvavviLaGG~GTRLg~---~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~ 95 (397)
.+.+||||||.||||+. +.||.++|+ .|+|++++.++++.. .++. .++|.|. +..+.
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~gi~-~i~vv~~-~~~~~ 67 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPL---VDKPLIQYVVNECIA---------------AGIT-EIVLVTH-SSKNS 67 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEEC-GGGHH
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEE---CCeEHHHHHHHHHHH---------------CCCC-EEEEEeC-CCHHH
Confidence 46789999999999985 679999999 799999999988763 1221 2344454 45788
Q ss_pred HHHHHhhcC----------------------CCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHh
Q 016006 96 TRKYFEGHK----------------------YFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALK 153 (397)
Q Consensus 96 t~~~~~~~~----------------------~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~ 153 (397)
+.+++.+.. .+|. +|.+..| ..+.|+|+.+....
T Consensus 68 i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~---~i~~~~~---------------------~~~~Gt~~al~~a~ 123 (302)
T 2e3d_A 68 IENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV---TIMQVRQ---------------------GLAKGLGHAVLCAH 123 (302)
T ss_dssp HHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTC---EEEEEEC---------------------SSCCCHHHHHHHTH
T ss_pred HHHHHhcchhhhhhhhhccchhhhhhhhhccccCc---ceEEeeC---------------------CccCCHHHHHHHHH
Confidence 999886420 0111 2322222 23678888666432
Q ss_pred hCchHHHHHHCCceEEEEEcCCCcccc----cc---cc-ccchhhhccCCcEEEEEeecCCCCcccceEEEe-C--CCC-
Q 016006 154 SSKLLEDMATRGIKYIDCYGVDNALVR----VA---DP-TFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRR-G--KGG- 221 (397)
Q Consensus 154 ~sg~l~~l~~~G~eyv~v~~vDN~l~~----~~---Dp-~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~-~--~~g- 221 (397)
+.+ +-++++|.+.|+++ . .. +. .++..+.+.++ +.+-+.+. .+....|++... + .+|
T Consensus 124 -----~~~---~~~~~lv~~~D~~~-~~~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~-~~~~~yg~v~~~~~~~~~g~ 192 (302)
T 2e3d_A 124 -----PVV---GDEPVAVILPDVIL-DEYESDLSQDNLAEMIRRFDETGH-SQIMVEPV-ADVTAYGVVDCKGVELAPGE 192 (302)
T ss_dssp -----HHH---CSSCEEEECTTEEE-CTTSSCTTTSTHHHHHHHHHHHCC-EEEEEEEC-SCGGGSEEEECTTCCCCTTC
T ss_pred -----HHc---CCCcEEEEcCCccc-cCccccchHHHHHHHHHHHHhcCC-cEEEEEEc-cCCCCccEEEecccccCCCC
Confidence 222 13689999999996 4 12 22 25566666665 44444443 344556777541 0 234
Q ss_pred ceEEEEeccCChhhhhhccCCCCceeeeccceeeeEeehHHHHHH
Q 016006 222 PLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 266 (397)
Q Consensus 222 ~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~~~~~l~~L~~~ 266 (397)
...|..+.|-|... . . . -+..|+++++|+.++++.+
T Consensus 193 ~~~v~~~~ekp~~~---~--~--~--~~~~~~Giyi~~~~~l~~l 228 (302)
T 2e3d_A 193 SVPMVGVVEKPKAD---V--A--P--SNLAIVGRYVLSADIWPLL 228 (302)
T ss_dssp EEEECEEEESCCTT---T--C--S--CSEEEEEEEEECTTHHHHH
T ss_pred ceeEEEEEECCCCC---c--c--c--cceEEEEEEEECHHHHHHH
Confidence 22455555543210 0 0 0 1246889999999877544
No 29
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.77 E-value=2.5e-08 Score=97.21 Aligned_cols=186 Identities=15% Similarity=0.060 Sum_probs=108.8
Q ss_pred EEEEEecCCCCCcCCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHH
Q 016006 20 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 96 (397)
Q Consensus 20 vavviLaGG~GTRLg~---~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t 96 (397)
+.+||||||.||||+. ..||.++|+ .|+|++++.++++.. .++. .++|.| .+..+.+
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~gi~-~iivv~-~~~~~~i 72 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPV---VDTPGIELIAAEAAE---------------LGAT-RLAIIT-APNKAGV 72 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEE-CTTCHHH
T ss_pred eEEEEECCCCccccCccccCCCceeeeE---CCEEHHHHHHHHHHh---------------CCCC-EEEEEe-cCcHHHH
Confidence 5689999999999985 779999999 799999999988763 1221 224444 4456788
Q ss_pred HHHHhhcCC---------------------CCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhC
Q 016006 97 RKYFEGHKY---------------------FGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSS 155 (397)
Q Consensus 97 ~~~~~~~~~---------------------fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~s 155 (397)
.+++..... +|+ +|.+..|+ .+.|+|+.+.....
T Consensus 73 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~---~i~~~~~~---------------------~~~Gt~~al~~a~~- 127 (323)
T 2pa4_A 73 LAHFERSSELEETLMERGKTDQVEIIRRAADLI---KAVPVTQD---------------------KPLGLGHAVGLAES- 127 (323)
T ss_dssp HHTTSCCHHHHHHHHHTTCHHHHHHTTHHHHHC---EEEEEECS---------------------SCCCHHHHHHTTGG-
T ss_pred HHHHhccchhhhhhhccchhhhhhhhhccccCc---ceEEEeCC---------------------ccCCcHHHHHHHHH-
Confidence 877753110 111 23333222 35688887765432
Q ss_pred chHHHHHHCCceEEEEEcCCCcccc-cccc-ccchhhhccCCcEEEEEeecC-CCCcccceEEEeC---CCCceEEEEec
Q 016006 156 KLLEDMATRGIKYIDCYGVDNALVR-VADP-TFLGYFIDKGVSAGAKVVRKA-YPQEKVGVFVRRG---KGGPLTVVEYS 229 (397)
Q Consensus 156 g~l~~l~~~G~eyv~v~~vDN~l~~-~~Dp-~~lg~~~~~~~~~~~kv~~k~-~p~e~vGvl~~~~---~~g~~~vvEy~ 229 (397)
.+ ..+-++++|.++|+++ . ..+. .++.++.+.++ ..+.+.+.. .+....|++.... .+|...|+.+.
T Consensus 128 ----~l-~~~~d~~lv~~~D~~~-~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~ 200 (323)
T 2pa4_A 128 ----VL-DDDEDVVAVMLPDDLV-LPTGVMERMAQVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMV 200 (323)
T ss_dssp ----GS-CSSCCEEEEECTTEEE-ESSCHHHHHHHHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEE
T ss_pred ----Hh-cCCCCeEEEEeCCccc-CchHHHHHHHHHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEE
Confidence 11 1234569999999997 4 2232 25566665565 233332221 1233457665430 23323566666
Q ss_pred cCChhhhhhccCCCCceeeeccceeeeEeehHHHHHH
Q 016006 230 ELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 266 (397)
Q Consensus 230 el~~~~~~~~~~~~g~~~f~~~Ni~~~~~~l~~L~~~ 266 (397)
|-|.... . .-+..|+++++|+.++++.+
T Consensus 201 Ekp~~~~-----~----~~~~~~~GiY~~~~~~~~~l 228 (323)
T 2pa4_A 201 EKPAIED-----A----PSRLAATGRYLLDRKIFDAL 228 (323)
T ss_dssp ESCCTTT-----C----SCSEEEEEEEEEETHHHHHH
T ss_pred ECCCCcc-----c----cccEEEEEEEEECHHHHHHH
Confidence 6443100 0 01246889999999877554
No 30
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=98.74 E-value=1.1e-07 Score=88.16 Aligned_cols=179 Identities=17% Similarity=0.194 Sum_probs=105.1
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ ||.++|+ .|+|++++.++++.. .+..=.++|.|.. +.+.+
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~l~~i---~g~pli~~~i~~~~~---------------~~~~~~ivvv~~~---~~i~~ 57 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKPLLDI---VGKPMIQHVYERALQ---------------VAGVAEVWVATDD---PRVEQ 57 (245)
T ss_dssp CEEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHT---------------CTTCCEEEEEESC---HHHHH
T ss_pred CeEEEEEcCCcCCCCC---CCccccc---CCchHHHHHHHHHHh---------------CCCCCeEEEECCc---HHHHH
Confidence 5789999999999996 9999998 899999999888762 1210134555543 78888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ +|+ .++.-+ ...+.|.++++.++.. + +.++++++++|+++
T Consensus 58 ~~~~---~~~-----~~~~~~-------------------~~~~~g~~~~~~~~~~------~---~~~~~lv~~~D~P~ 101 (245)
T 1h7e_A 58 AVQA---FGG-----KAIMTR-------------------NDHESGTDRLVEVMHK------V---EADIYINLQGDEPM 101 (245)
T ss_dssp HHHH---TTC-----EEEECC-------------------SCCSSHHHHHHHHHHH------S---CCSEEEECCTTCTT
T ss_pred HHHH---cCC-----eEEeCC-------------------CccCCcHHHHHHHHHh------C---CCCEEEEEcCCcCc
Confidence 8875 232 222100 1125566776665532 1 45889999999997
Q ss_pred cccccc-ccchhhhcc-CCcEEEEEeecCCCC-----cccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeecc
Q 016006 179 VRVADP-TFLGYFIDK-GVSAGAKVVRKAYPQ-----EKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWS 251 (397)
Q Consensus 179 ~~~~Dp-~~lg~~~~~-~~~~~~kv~~k~~p~-----e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~ 251 (397)
....+. .++..+... ++++++-+.+. ++. ..++++. . ++|++ +.+++-+... ... +..... ..
T Consensus 102 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~g~~--~~~~~~~~~~--~r~--~~~~~~-~~ 171 (245)
T 1h7e_A 102 IRPRDVETLLQGMRDDPALPVATLCHAI-SAAEAAEPSTVKVVV-N-TRQDA--LYFSRSPIPY--PRN--AEKARY-LK 171 (245)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEEEEEEE-CHHHHTCTTSCEEEE-C-TTCBE--EEEESSCSSC--CTT--GGGCCE-EE
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeecC-CHHHhcCCCCcEEEE-C-CCCcE--EEeecCCCCC--Ccc--cccCce-eE
Confidence 443222 244555555 67776655554 221 1222222 2 35643 4554421100 000 000112 24
Q ss_pred ceeeeEeehHHHHHHh
Q 016006 252 NVCLHMFTLDFLNQVA 267 (397)
Q Consensus 252 Ni~~~~~~l~~L~~~~ 267 (397)
|.++++|+.++|.+..
T Consensus 172 ~~g~y~~~~~~l~~~~ 187 (245)
T 1h7e_A 172 HVGIYAYRRDVLQNYS 187 (245)
T ss_dssp EEEEEEEEHHHHHHGG
T ss_pred EEEEEEcCHHHHHHHH
Confidence 8999999999987654
No 31
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=98.73 E-value=8.3e-08 Score=90.73 Aligned_cols=184 Identities=13% Similarity=0.107 Sum_probs=106.7
Q ss_pred EEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHH-HHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 20 LAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQA-ERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 20 vavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~-~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
..+||||||.||||+ +|.+.|+ .|||++++.+ +++.. .++. .++|-|. ++.+.+
T Consensus 2 ~~aiIlA~G~stR~~---~K~L~~i---~GkPli~~~i~~~~~~---------------~~~~-~vvVvt~---~~~i~~ 56 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP---GKPLLLI---HDRPMILRVVDQAKKV---------------EGFD-DLCVATD---DERIAE 56 (253)
T ss_dssp EEEEEECCSCCTTST---TGGGSEE---TTEEHHHHHHHHHHTC---------------TTCC-EEEEEES---CHHHHH
T ss_pred eEEEEEeCCCCCCCC---CCceeeE---CCeEhHHHHHHHHHHh---------------cCCC-EEEEECC---HHHHHH
Confidence 468999999999997 5999999 9999999998 87652 1111 2355553 588888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ ||.+ +.+-.| ..+.|++.+..++ +.+...+.++++++++|++|
T Consensus 57 ~~~~---~g~~---v~~~~~---------------------~~~~Gt~~i~~a~------~~~~~~~~d~vlv~~gD~Pl 103 (253)
T 4fcu_A 57 ICRA---EGVD---VVLTSA---------------------DHPSGTDRLSEVA------RIKGWDADDIIVNVQGDEPL 103 (253)
T ss_dssp HHHT---TTCC---EEECCT---------------------TCCCHHHHHHHHH------HHHTCCTTCEEEECCTTCTT
T ss_pred HHHH---cCCe---EEEeCC---------------------CCCChHHHHHHHH------HhcCcCCCCEEEEEeCCccc
Confidence 8875 4542 221111 1245555455443 33322256899999999998
Q ss_pred ccccccc-cchhhhcc-CCcEEEEEee------cCCCCcccceEEEeCCCCceEEEEecc--CChhhhhhcc--CCCCce
Q 016006 179 VRVADPT-FLGYFIDK-GVSAGAKVVR------KAYPQEKVGVFVRRGKGGPLTVVEYSE--LDPSLASAIN--QETGRL 246 (397)
Q Consensus 179 ~~~~Dp~-~lg~~~~~-~~~~~~kv~~------k~~p~e~vGvl~~~~~~g~~~vvEy~e--l~~~~~~~~~--~~~g~~ 246 (397)
....+-. ++..+.+. +.+++.-+++ -.+|.. ++|++ + ++|+ ++-+++ +|..- .... +.+...
T Consensus 104 i~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~-~kvv~-d-~~g~--~l~fsr~~ip~~r-~~~~~~~~~~~~ 177 (253)
T 4fcu_A 104 LPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSI-VKVVM-S-KQNE--ALYFSRATIPYDR-DGAKRDEPTLHT 177 (253)
T ss_dssp CCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTS-CEEEE-C-TTSB--EEEEESSCCSCCT-TTSSSSSCCCCS
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCc-cEEEE-C-CCCe--EEEecCCCCCCCC-Cccccccccccc
Confidence 5322221 34444444 4455544443 134444 45543 3 3674 355665 33211 1000 000011
Q ss_pred eeeccceeeeEeehHHHHHHhh
Q 016006 247 RFCWSNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 247 ~f~~~Ni~~~~~~l~~L~~~~~ 268 (397)
.| ..|+++|.|+.++|+++..
T Consensus 178 ~~-~~~~GiY~f~~~~l~~~~~ 198 (253)
T 4fcu_A 178 QA-FRHLGLYAYRVSLLQEYVT 198 (253)
T ss_dssp CC-EEEEEEEEEEHHHHHHHTT
T ss_pred ce-eEEEEEEEeCHHHHHHHHh
Confidence 22 3599999999999998763
No 32
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=98.72 E-value=1.5e-07 Score=86.62 Aligned_cols=177 Identities=19% Similarity=0.192 Sum_probs=103.3
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ ||.++|+ .|++++++.++++... +. .++|.|.. +.+.+
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~i---~g~pli~~~l~~~~~~----------------~~-~i~v~~~~---~~i~~ 55 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK---EKPLKNL---LGKPLIRWVVEGLVKT----------------GE-RVILATDS---ERVKE 55 (234)
T ss_dssp CEEEEEECCSCCTTTT---TGGGCEE---TTEEHHHHHHHHHHTT----------------TS-CEEEEESC---HHHHH
T ss_pred ceEEEEEcCCCCCCCC---CCcceeE---CCEEHHHHHHHHHHHh----------------CC-EEEEECCh---HHHHH
Confidence 5788999999999998 9999999 8999999999887631 11 23555543 67788
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ + . ++ +... ...+.|.|+++.++.. .+.++++++++|+++
T Consensus 56 ~~~~--~--~---~~--~~~~-------------------~~~~~g~~~~~~~~~~---------~~~~~vlv~~~D~P~ 98 (234)
T 2y6p_A 56 VVED--L--C---EV--FLTP-------------------SDLPSGSDRVLYVVRD---------LDVDLIINYQGDEPF 98 (234)
T ss_dssp HHTT--T--S---EE--EECC-------------------TTCCSHHHHHHHHHTT---------CCCSEEEECCTTCCC
T ss_pred HHHh--c--e---EE--EECC-------------------cccccchHHHHHHHHh---------CCCCEEEEecCCcCc
Confidence 8764 1 1 22 2110 1236677887755432 145899999999987
Q ss_pred cccccc-ccchhhhccCCcEEEEEeec---CCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeecccee
Q 016006 179 VRVADP-TFLGYFIDKGVSAGAKVVRK---AYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 254 (397)
Q Consensus 179 ~~~~Dp-~~lg~~~~~~~~~~~kv~~k---~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~ 254 (397)
....+. .++..+.+.+..+++..... .+| ..++++ .+ ++|+ ++.+.+-+... ..++ ....+. .|.+
T Consensus 99 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~-~~g~--v~~~~e~~~~~--~~~~--~~~~~~-~~~g 168 (234)
T 2y6p_A 99 VYEEDIKLIFRELEKGERVVTLARKDKEAYERP-EDVKVV-LD-REGY--ALYFSRSPIPY--FRKN--DTFYPL-KHVG 168 (234)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCT-TSCEEE-EC-TTSB--EEEEESSCCSC--CSSC--CSSCCE-EEEE
T ss_pred CCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCC-CceEEE-Ec-CCCC--EeeeecCCCCc--cccc--ccceee-EEEE
Confidence 543222 24555555553233222211 123 233442 22 3564 45665533210 0000 011222 4899
Q ss_pred eeEeehHHHHHHhh
Q 016006 255 LHMFTLDFLNQVAN 268 (397)
Q Consensus 255 ~~~~~l~~L~~~~~ 268 (397)
+++|+.+.|.++..
T Consensus 169 iy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 169 IYGFRKETLMEFGA 182 (234)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred EEEcCHHHHHHHHh
Confidence 99999999977653
No 33
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=98.71 E-value=4e-08 Score=94.36 Aligned_cols=186 Identities=12% Similarity=0.070 Sum_probs=101.2
Q ss_pred CCEEEEEecCCCCCcCCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchH
Q 016006 18 GKLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 94 (397)
Q Consensus 18 gkvavviLaGG~GTRLg~---~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~ 94 (397)
..+.+||||||.||||+. ..||.++|+ .|+|++++.++++.. .++. .++|.| .+..+
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~g~~-~i~vv~-~~~~~ 72 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPV---VDRPLIQYAVDEAVE---------------AGIE-QMIFVT-GRGKS 72 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEE-CTTCH
T ss_pred CccEEEEECCCCccccCccccCCCceeeeE---CCeEHHHHHHHHHHh---------------CCCC-EEEEEe-CCCHH
Confidence 356789999999999985 779999999 799999999988763 1211 224444 45578
Q ss_pred HHHHHHhhcC-------------------C-CCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhh
Q 016006 95 ATRKYFEGHK-------------------Y-FGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKS 154 (397)
Q Consensus 95 ~t~~~~~~~~-------------------~-fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~ 154 (397)
.+.+++.+.. + +|. +|.+..|. .|.|+|+.+....
T Consensus 73 ~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~---~i~~~~~~---------------------~~~Gt~~al~~a~- 127 (297)
T 2ux8_A 73 ALEDHFDIAYELEATMAARGKSLDVLDGTRLKPG---NIAYVRQQ---------------------EPMGLGHAVWCAR- 127 (297)
T ss_dssp HHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTT---SEEEEECC---------------------SCCCHHHHHHTTH-
T ss_pred HHHHHHhhhhhhhhhhhhccchhhhhhhcccCCC---ceEEEeCC---------------------CCCChHHHHHHHH-
Confidence 8888886420 0 121 23332222 3678888776432
Q ss_pred CchHHHHHHCCceEEEEEcCCCcccc--cccc-ccchhhhccCCcEEEEEeecC-CCCcccceEEEeC-CCCceEEEEec
Q 016006 155 SKLLEDMATRGIKYIDCYGVDNALVR--VADP-TFLGYFIDKGVSAGAKVVRKA-YPQEKVGVFVRRG-KGGPLTVVEYS 229 (397)
Q Consensus 155 sg~l~~l~~~G~eyv~v~~vDN~l~~--~~Dp-~~lg~~~~~~~~~~~kv~~k~-~p~e~vGvl~~~~-~~g~~~vvEy~ 229 (397)
+.+ +-++++|.+.|+++ . ..+. .++..+.+.++ ..+.+.+.. .+....|++.... .+|...|.++.
T Consensus 128 ----~~~---~~~~~lv~~~D~~~-~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ 198 (297)
T 2ux8_A 128 ----DIV---GDEPFAVLLPDDFM-FGQPGCLKQMVDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLV 198 (297)
T ss_dssp ----HHH---CSSCEEEECTTEEE-ESSSCHHHHHHHHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC----
T ss_pred ----HHc---CCCcEEEEeCCeec-CCChHHHHHHHHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEE
Confidence 222 23789999999995 4 2222 25566655565 333333221 1223467664320 13322445555
Q ss_pred cCChhhhhhccCCCCceeeeccceeeeEeehHHHHHH
Q 016006 230 ELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 266 (397)
Q Consensus 230 el~~~~~~~~~~~~g~~~f~~~Ni~~~~~~l~~L~~~ 266 (397)
|-|... .. .-+..|+++++|+.++++.+
T Consensus 199 ekp~~~---~~------~~~~~~~Giyi~~~~~l~~l 226 (297)
T 2ux8_A 199 EKPAPG---TA------PSNLSVIGRYILQPEVMRIL 226 (297)
T ss_dssp -------------------CCCEEEEEEECTHHHHHH
T ss_pred ECCCCC---CC------CccEEEEEEEEECHHHHHHH
Confidence 543210 00 01346899999999877554
No 34
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=98.65 E-value=7.2e-08 Score=90.76 Aligned_cols=168 Identities=15% Similarity=0.118 Sum_probs=95.9
Q ss_pred CEEEEEecCCCCCcCC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHH
Q 016006 19 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 95 (397)
Q Consensus 19 kvavviLaGG~GTRLg---~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~ 95 (397)
++.+||||||.||||+ .+.||.++|+ .|+|++++.++++... ++. .++|.|.. ..+.
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i---~gkpli~~~l~~l~~~---------------g~~-~i~vv~~~-~~~~ 84 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQV---NQKPLIEYQIEFLKEK---------------GIN-DIIIIVGY-LKEQ 84 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHHT---------------TCC-CEEEEECT-TGGG
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeE---CCEEHHHHHHHHHHHC---------------CCC-eEEEEeCC-cHHH
Confidence 5789999999999998 5789999998 7999999999887631 111 23555543 3455
Q ss_pred HHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCC
Q 016006 96 TRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVD 175 (397)
Q Consensus 96 t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vD 175 (397)
+.++.++ +| +.+..++ .+.+.|+++.+.+... .+ +.++|+++|
T Consensus 85 i~~~~~~---~~-----~~iv~~~-------------------~~~~~g~~~al~~a~~-----~~-----~~~lv~~~D 127 (254)
T 1jyk_A 85 FDYLKEK---YG-----VRLVFND-------------------KYADYNNFYSLYLVKE-----EL-----ANSYVIDAD 127 (254)
T ss_dssp GTHHHHH---HC-----CEEEECT-------------------TTTTSCTHHHHHTTGG-----GC-----TTEEEEETT
T ss_pred HHHHHHh---CC-----cEEEECC-------------------CccCCCcHHHHHHHHH-----HC-----CCEEEEeCC
Confidence 6655543 23 2333222 1235566554443221 11 237899999
Q ss_pred CccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceee
Q 016006 176 NALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCL 255 (397)
Q Consensus 176 N~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~ 255 (397)
+++.. |. +-.+.+.++.++ +.. .+|....|++ .+ ++|+ |+.+.+-+. ....|+++
T Consensus 128 ~~~~~--~~--~~~~~~~~~~~t--~~~-~~~~~~~~v~-~d-~~g~--v~~~~e~~~--------------~~~~~~Gi 182 (254)
T 1jyk_A 128 NYLFK--NM--FRNDLTRSTYFS--VYR-EDCTNEWFLV-YG-DDYK--VQDIIVDSK--------------AGRILSGV 182 (254)
T ss_dssp EEESS--CC--CCSCCCSEEEEE--CEE-SSCSSCCEEE-EC-TTCB--EEEEECCCS--------------SEEBCCSE
T ss_pred cccCH--HH--HHHHHhCCceEE--EEc-ccCCCCeEEE-EC-CCCe--EEEEEECCC--------------CCcEEEEE
Confidence 99743 32 222333333222 222 3343345654 33 3563 456655210 12468889
Q ss_pred eEeehHHHHHHhh
Q 016006 256 HMFTLDFLNQVAN 268 (397)
Q Consensus 256 ~~~~l~~L~~~~~ 268 (397)
++|+.++++.+.+
T Consensus 183 y~~~~~~~~~l~~ 195 (254)
T 1jyk_A 183 SFWDAPTAEKIVS 195 (254)
T ss_dssp EEECHHHHHHHHH
T ss_pred EEEcHHHHHHHHH
Confidence 9998876554443
No 35
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=98.64 E-value=1.3e-07 Score=93.05 Aligned_cols=192 Identities=16% Similarity=0.148 Sum_probs=110.9
Q ss_pred EEEEEecCCCCCcCC----CCCCCccccccCCCC-CChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchH
Q 016006 20 LAVLLLSGGQGTRLG----SSDPKGCVNIGLPSG-KSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 94 (397)
Q Consensus 20 vavviLaGG~GTRLg----~~~PKg~~~i~l~~~-ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~ 94 (397)
+.+||||||.||||+ ...||.++|+ .| +|++|+.++++... .++. ..+|.|.....+
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l---~g~~pli~~~l~~l~~~--------------~~~~-~iivvt~~~~~~ 63 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKL---FGNKSLMRWTFERVLEE--------------MDPK-DVIVVTHKDYVE 63 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCC---BTTBCHHHHHHHHHHTT--------------CCGG-GEEEEEEGGGHH
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEEC---CCCCcHHHHHHHHHhcc--------------CCCC-cEEEEcChHHHH
Confidence 357899999999998 5679999888 66 99999999887631 0111 235566554456
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcC
Q 016006 95 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 174 (397)
Q Consensus 95 ~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~v 174 (397)
.+.+++.+.. ..++ .. ...|.|+|+....... .+ ..-+++++.+.
T Consensus 64 ~i~~~l~~~~-----~~~i--i~---------------------e~~~~gta~ai~~a~~-----~~--~~~~~~lvl~~ 108 (336)
T 2x65_A 64 RTKKELPELP-----DENI--IA---------------------EPMKKNTAPACFIGTK-----LA--DDDEPVLVLPA 108 (336)
T ss_dssp HHHHHCTTSC-----GGGE--EE---------------------ESSCCCHHHHHHHHHT-----TS--CTTCEEEEEET
T ss_pred HHHHHhhccc-----cceE--Ee---------------------CCCCCCcHHHHHHHHH-----hh--CCCCEEEEEcC
Confidence 6777776421 1121 21 1235677776654322 11 22478999999
Q ss_pred CCcccccccc-----ccchhhhccCCcEEEEEeecCCCCcccceEEEeCC--CCceEEEEeccCChhhhhhccCCCCcee
Q 016006 175 DNALVRVADP-----TFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK--GGPLTVVEYSELDPSLASAINQETGRLR 247 (397)
Q Consensus 175 DN~l~~~~Dp-----~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~--~g~~~vvEy~el~~~~~~~~~~~~g~~~ 247 (397)
|.++....+- .++.++.+.+..+++-+.+. .|....|.+..... ++...|..+.|-|.....+..-..|.
T Consensus 109 D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~-~~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~-- 185 (336)
T 2x65_A 109 DHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPT-RPETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKFVESGR-- 185 (336)
T ss_dssp TCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCC-SCCSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHTC--
T ss_pred CceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecc-cCCCCceEEEECCccCCCccEEEEEEECCChHHHHHHHhcCC--
Confidence 9996321111 12233444466666655544 45566788765410 11135677777665321110001222
Q ss_pred eeccceeeeEeehHHHHHHhh
Q 016006 248 FCWSNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 248 f~~~Ni~~~~~~l~~L~~~~~ 268 (397)
| .-|.++++|+.+.|.+.+.
T Consensus 186 y-~~n~Giy~~~~~~ll~~l~ 205 (336)
T 2x65_A 186 F-LWNSGMFLWKAREFIEEVK 205 (336)
T ss_dssp E-EEEEEEEEEEHHHHHHHHH
T ss_pred e-EEEeeeEEEEHHHHHHHHH
Confidence 2 3488899999988844443
No 36
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=98.64 E-value=4.3e-07 Score=85.41 Aligned_cols=186 Identities=16% Similarity=0.180 Sum_probs=106.1
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ +|.++|+ .|+|++++.++++.. .+. -.++|.|. ++.+.+
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~~---~gkpli~~~l~~l~~---------------~~~-~~ivvv~~---~~~i~~ 56 (262)
T 1vic_A 2 SFTVIIPARFASSRLP---GKPLADI---KGKPMIQHVFEKALQ---------------SGA-SRVIIATD---NENVAD 56 (262)
T ss_dssp CCEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHH---------------TTC-SEEEEEES---CHHHHH
T ss_pred CcEEEEEcCCCCCCCC---CCccccC---CCeEHHHHHHHHHHh---------------CCC-ceEEEECC---cHHHHH
Confidence 4678999999999996 5999998 799999999988763 112 12355554 256888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ +|. .++.+. ...+.|.|.+..+ ++.+...+-+++++.++|+++
T Consensus 57 ~~~~---~~~-----~~~~~~-------------------~~~~~g~~~~~~~------~~~l~~~~~~~vlv~~~D~P~ 103 (262)
T 1vic_A 57 VAKS---FGA-----EVCMTS-------------------VNHNSGTERLAEV------VEKLAIPDNEIIVNIQGDEPL 103 (262)
T ss_dssp HHHH---TTC-----EEEECC-------------------CSSCCHHHHHHHH------HHHTTCCTTCEEEECCTTCTT
T ss_pred HHHh---cCC-----EEEECC-------------------ccccCChHHHHHH------HHHhccCCCCEEEEEeCCcCc
Confidence 8865 342 222221 1135566533322 222322246899999999997
Q ss_pred cccccc-ccchhhhccCCcEEEEEeecCCCC----cccceEEEeCCCCceEEEEeccCC-hhhhhhc-------cCCCCc
Q 016006 179 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQ----EKVGVFVRRGKGGPLTVVEYSELD-PSLASAI-------NQETGR 245 (397)
Q Consensus 179 ~~~~Dp-~~lg~~~~~~~~~~~kv~~k~~p~----e~vGvl~~~~~~g~~~vvEy~el~-~~~~~~~-------~~~~g~ 245 (397)
....+. .++..+.+.++++++-+++..++. ...+.++.. .+|++ +.+++-+ +..+... ..++..
T Consensus 104 i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v--~~f~~~~~~~~r~~~~~~~~~~~~~~p~ 180 (262)
T 1vic_A 104 IPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTD-KDGYV--LYFSRSVIPYDRDQFMNLQDVQKVQLSD 180 (262)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEEC-TTSBE--EEEESSCSSCCHHHHTTCSCGGGCCCCT
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHhcCCCceEEEEC-CCCCE--eeeecCCCCcCCcccccccccccccccc
Confidence 543332 255555566778776666654321 112223323 35643 4554421 0001100 000101
Q ss_pred eeeeccceeeeEeehHHHHHHh
Q 016006 246 LRFCWSNVCLHMFTLDFLNQVA 267 (397)
Q Consensus 246 ~~f~~~Ni~~~~~~l~~L~~~~ 267 (397)
.| ..|+++++|+.+++..+.
T Consensus 181 -~~-~~~~giy~~~~~~l~~~~ 200 (262)
T 1vic_A 181 -AY-LRHIGIYAYRAGFIKQYV 200 (262)
T ss_dssp -TC-EEEEEEEEEEHHHHHHHH
T ss_pred -ce-EEEEEEEEeeHHHHHHHH
Confidence 12 369999999999987754
No 37
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=98.51 E-value=7.5e-07 Score=81.76 Aligned_cols=183 Identities=14% Similarity=0.099 Sum_probs=98.2
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ ||.++|+ .|+|++++.++++.+. ..+. .++|-|. ++.+.+
T Consensus 4 ~~~aiIlA~G~g~R~~---~K~l~~i---~gkpll~~~l~~~~~~--------------~~~~-~ivvv~~---~~~i~~ 59 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP---LKNLRKM---NGISLLGHTINAAISS--------------KCFD-RIIVSTD---GGLIAE 59 (228)
T ss_dssp EEEEEEECCSSCSSST---TTTTCEE---TTEEHHHHHHHHHHHH--------------CCCS-EEEEEES---CHHHHH
T ss_pred ceEEEEecCCCCCCCC---Cccccee---CCcCHHHHHHHHHHhC--------------CCCC-EEEEECC---CHHHHH
Confidence 5789999999999999 9999999 7999999999887631 0111 2355553 466778
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCcc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 178 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~l 178 (397)
++++ +|. ++ +.++ . .....|.| ...++.. .++.+ ..+.++++++++|+++
T Consensus 60 ~~~~---~~~---~~--~~~~----------------~--~~~~~~~g-~~~sv~~--~l~~~-~~~~d~vlv~~~D~P~ 109 (228)
T 1ezi_A 60 EAKN---FGV---EV--VLRP----------------A--ELASDTAS-SISGVIH--ALETI-GSNSGTVTLLQPTSPL 109 (228)
T ss_dssp HHHH---TTC---EE--EECC----------------C--------CH-HHHHHHH--HHHHH-TCCSEEEEECCTTCTT
T ss_pred HHHH---cCC---EE--EeCc----------------h--HHcCCCCC-hHHHHHH--HHHHh-CCCCCEEEEEcCCCCc
Confidence 8865 343 22 2221 0 01112222 2222211 12333 2346899999999997
Q ss_pred ccccccc-cchhhhccCCcEEEEEeecCC-CCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCce-eeeccceee
Q 016006 179 VRVADPT-FLGYFIDKGVSAGAKVVRKAY-PQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRL-RFCWSNVCL 255 (397)
Q Consensus 179 ~~~~Dp~-~lg~~~~~~~~~~~kv~~k~~-p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~-~f~~~Ni~~ 255 (397)
....+.. ++..+...++++.+-+++... | .+..+.. .+|+ ++++.+-++. .... + .+ .....|.++
T Consensus 110 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~-~~g~--~~~~~~~~~~-~~~~-~---~~~~~~~~~~gi 178 (228)
T 1ezi_A 110 RTGAHIREAFSLFDEKIKGSVVSACPMEHHP---LKTLLQI-NNGE--YAPMRHLSDL-EQPR-Q---QLPQAFRPNGAI 178 (228)
T ss_dssp CCHHHHHHHHTTCCTTTCCCEEEEEECSSCT---TSCEEEC-C--C--EEESSCHHHH-TCCG-G---GSCCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEEEecCCCc---ceeeEEc-CCCc--Eeeccccccc-cCCc-c---cCchhheeeeEE
Confidence 5432222 444455556677766666543 3 2333323 3564 3444331110 0000 0 11 112246678
Q ss_pred eEeehHHHHHH
Q 016006 256 HMFTLDFLNQV 266 (397)
Q Consensus 256 ~~~~l~~L~~~ 266 (397)
++++.+.|.+.
T Consensus 179 y~~~~~~l~~~ 189 (228)
T 1ezi_A 179 YINDTASLIAN 189 (228)
T ss_dssp EEEEHHHHHHH
T ss_pred EEEeHHHHhhC
Confidence 88888877553
No 38
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=98.43 E-value=6.6e-07 Score=87.94 Aligned_cols=189 Identities=16% Similarity=0.154 Sum_probs=106.5
Q ss_pred CEEEEEecCCCCCcCC----CCCCCccccccCCCC-CChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccch
Q 016006 19 KLAVLLLSGGQGTRLG----SSDPKGCVNIGLPSG-KSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTD 93 (397)
Q Consensus 19 kvavviLaGG~GTRLg----~~~PKg~~~i~l~~~-ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~ 93 (397)
++.+||||||.||||. ...||.++|+ .| +|++|+.++++... .++. ..+|.|.....
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l---~G~~pli~~~l~~l~~~--------------~~~~-~iiVvt~~~~~ 63 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPL---FEGKTLLEATLERLAPL--------------VPPE-RTLLAVRRDQE 63 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBC---GGGCBHHHHHHHHHTTT--------------SCGG-GEEEEEEGGGH
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEc---CCCChHHHHHHHHHhCc--------------CCCC-CEEEEcChHHH
Confidence 3678999999999997 4679999988 66 99999999887631 0111 23555554333
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEc
Q 016006 94 DATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYG 173 (397)
Q Consensus 94 ~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~ 173 (397)
+.+.+++.+ ..+ + +...|.|+|........ +... .+-++++|++
T Consensus 64 ~~i~~~l~~--------~~~--i---------------------~e~~~~gta~ai~~a~~---l~~~--~~~~~~lvl~ 107 (337)
T 2cu2_A 64 AVARPYADG--------IRL--L---------------------LEPLGRDTAGAVLLGVA---EALK--EGAERLLVLP 107 (337)
T ss_dssp HHHGGGCSS--------SEE--E---------------------EESSCCHHHHHHHHHHH---HHHH--HTCSEEEEEE
T ss_pred HHHHHHhcc--------Cce--E---------------------ecCCCCCcHHHHHHHHH---Hhcc--CCCCEEEEEE
Confidence 344433321 011 1 11235677775554322 2211 1357899999
Q ss_pred CCCcccccccc-----ccchhhhccCCcEEEEEeecCCCCcccceEEEeCC-CCceEEEEeccCChhh-hhhccCCCCce
Q 016006 174 VDNALVRVADP-----TFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK-GGPLTVVEYSELDPSL-ASAINQETGRL 246 (397)
Q Consensus 174 vDN~l~~~~Dp-----~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~-~g~~~vvEy~el~~~~-~~~~~~~~g~~ 246 (397)
.|.++....+- .++.++. .+..+++-+.+. .|....|.+..... ++...|..+.|-|... +...- ..|
T Consensus 108 ~D~~~~~~~~~~~~l~~~~~~~~-~~~~vt~~i~p~-~~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~~-~~g-- 182 (337)
T 2cu2_A 108 ADHYVGDDEAYREALATMLEAAE-EGFVVALGLRPT-RPETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEYI-RKG-- 182 (337)
T ss_dssp SSCEESCHHHHHHHHHHHHHHCC-TTCEEEEEECCS-SCCSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHHH-HTT--
T ss_pred CCccCCCHHHHHHHHHHHHHHHH-cCCeEEEeeccC-CCCCCceEEEECCcccccCeEEEEEeCCChHHHHHHh-hcC--
Confidence 99996321110 1122233 366666655554 35566788865410 0113567777766532 11110 122
Q ss_pred eeeccceeeeEeehHHHHHHhh
Q 016006 247 RFCWSNVCLHMFTLDFLNQVAN 268 (397)
Q Consensus 247 ~f~~~Ni~~~~~~l~~L~~~~~ 268 (397)
| .-|.++++|+.+.+.+.+.
T Consensus 183 -~-~~n~Giy~f~~~~ll~~l~ 202 (337)
T 2cu2_A 183 -Y-VWNGGVFAFAPATMAELFR 202 (337)
T ss_dssp -C-EEEEEEEEECHHHHHHHHH
T ss_pred -C-EEEEEEEEEeHHHHHHHHH
Confidence 2 3588999999988744443
No 39
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=98.40 E-value=1.2e-06 Score=81.71 Aligned_cols=124 Identities=15% Similarity=0.205 Sum_probs=71.5
Q ss_pred CEEEEEecCCCCCcCCC-CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHH
Q 016006 19 KLAVLLLSGGQGTRLGS-SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 97 (397)
Q Consensus 19 kvavviLaGG~GTRLg~-~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~ 97 (397)
++.+||||||.|||||. +.||.++|+ .|+|++++.++.+.+. ..+. .++|.|+....+.+.
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l---~Gkpll~~~l~~~~~~--------------~~~~-~ivvv~~~~~~~~~~ 64 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPL---NGKPIIVHTVEKFILN--------------TRFD-KILISSPKEWMNHAE 64 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEE---TTEEHHHHHHHHHHTC--------------TTCS-EEEEEECGGGHHHHH
T ss_pred ccEEEEECCccccccCCCCCCCeEEEE---CCeeHHHHHHHHHHcC--------------CCCC-EEEEEeCHHHHHHHH
Confidence 57899999999999998 789999999 8999999998887620 0111 235556655444566
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCC---chHhHHHhhCchHHHHHH----CCceEEE
Q 016006 98 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGN---GGVYSALKSSKLLEDMAT----RGIKYID 170 (397)
Q Consensus 98 ~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~---Ggi~~~L~~sg~l~~l~~----~G~eyv~ 170 (397)
+.+++.. .+ ..+.+. ++|. ++++.+| +.+.. .+.++++
T Consensus 65 ~~~~~~~---~~-~~~~~~-------------------------~~~~~~~~sv~~al------~~l~~~~~~~~~~~vl 109 (246)
T 3f1c_A 65 DNIKKYI---SD-DRIVVI-------------------------EGGEDRNETIMNGI------RFVEKTYGLTDDDIIV 109 (246)
T ss_dssp HHHHHHC---CC-TTEEEE-------------------------ECCSSHHHHHHHHH------HHHHHHTCCCTTCEEE
T ss_pred HHHHHhC---CC-CCEEEE-------------------------CCCCchHHHHHHHH------HHHhhhhcCCCCCEEE
Confidence 7776532 12 123322 2222 2344443 33433 2468999
Q ss_pred EEcCCCccccccccc-cchhhhccCC
Q 016006 171 CYGVDNALVRVADPT-FLGYFIDKGV 195 (397)
Q Consensus 171 v~~vDN~l~~~~Dp~-~lg~~~~~~~ 195 (397)
|.++|.++....+.. ++..+...++
T Consensus 110 v~~~d~Pli~~~~i~~li~~~~~~~a 135 (246)
T 3f1c_A 110 THDAVRPFLTHRIIEENIDAALETGA 135 (246)
T ss_dssp EEETTCTTCCHHHHHHHHHHHHHTSE
T ss_pred EecCcccCCCHHHHHHHHHHHHhcCC
Confidence 999999985433322 4455555443
No 40
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=98.37 E-value=2.2e-06 Score=79.00 Aligned_cols=134 Identities=14% Similarity=0.172 Sum_probs=81.7
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||+ +|.++|+ .|++++++.++++.+.. .+. .++|-| .++.+.+
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~l~~i---~Gkpli~~~i~~~~~~~--------------~~~-~ivv~~---~~~~i~~ 58 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKNIKRL---AGVPLIGWVLRAALDAG--------------VFQ-SVWVST---DHDEIEN 58 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTTTSEE---TTEEHHHHHHHHHHHHT--------------CCS-EEEEEE---SCHHHHH
T ss_pred cEEEEEEcCCCCCCCC---CcccceE---CCEEHHHHHHHHHHhCC--------------CcC-EEEEEC---ChHHHHH
Confidence 6889999999999996 5999998 89999999999886411 111 234445 3577888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCcc-ccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKV-AKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 177 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i-~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~ 177 (397)
++++ +|. .++.++ ..+ ...+.|.+.+..++.. + .+.++++++++|++
T Consensus 59 ~~~~---~g~-----~~~~~~----------------~~~~~~~~~~~~~v~~al~~------~--~~~d~vlv~~~D~P 106 (229)
T 1qwj_A 59 VAKQ---FGA-----QVHRRS----------------SETSKDSSTSLDAIVEFLNY------H--NEVDIVGNIQATSP 106 (229)
T ss_dssp HHHH---TTC-----EEEECC----------------GGGSSTTCCHHHHHHHHHTT------C--TTCSEEEEECTTCT
T ss_pred HHHH---cCC-----EEEeCh----------------hhhcCCCCcHHHHHHHHHHh------c--CCCCEEEEecCCCC
Confidence 8875 343 223322 000 0112222333444322 1 24689999999999
Q ss_pred ccccccc-ccchhhhccCCcEEEEEeecCCCC
Q 016006 178 LVRVADP-TFLGYFIDKGVSAGAKVVRKAYPQ 208 (397)
Q Consensus 178 l~~~~Dp-~~lg~~~~~~~~~~~kv~~k~~p~ 208 (397)
|....+. .++..+...++++.+.+.+..+|.
T Consensus 107 li~~~~i~~l~~~~~~~~~~~~~~~~~~~~p~ 138 (229)
T 1qwj_A 107 CLHPTDLQKVAEMIREEGYDSVFSVVRRHQFR 138 (229)
T ss_dssp TCCHHHHHHHHHHHHSSCCSEEEEEEEECCCE
T ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEeeccChh
Confidence 8543222 245556666777666555443443
No 41
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=98.32 E-value=2.2e-06 Score=77.90 Aligned_cols=41 Identities=22% Similarity=0.432 Sum_probs=36.8
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILC 62 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~ 62 (397)
++.+||||||.||||+...||.++|+ .|+|++++.++++..
T Consensus 2 ~~~~vIlA~G~g~R~~~~~~K~l~~~---~g~pli~~~l~~l~~ 42 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLRAGRPKAFVTL---GGTPLLEHALSGLRA 42 (223)
T ss_dssp CEEEEEECCCCCGGGTSSSCGGGSEE---TTEEHHHHHHHHHHH
T ss_pred ceEEEEECCccCcccCCCCCCeeeEE---CCeEHHHHHHHHHhc
Confidence 57899999999999997789999998 799999999988763
No 42
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=98.30 E-value=4.2e-06 Score=77.87 Aligned_cols=168 Identities=18% Similarity=0.276 Sum_probs=99.5
Q ss_pred CCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHH
Q 016006 18 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 97 (397)
Q Consensus 18 gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~ 97 (397)
|++++||||||.|||||.+.||.++++ .|+|++++.++.+.+. ..+. .++|.|+....+.++
T Consensus 6 ~~~~aIIlAaG~g~Rmg~~~~K~l~~l---~Gkpll~~~l~~~~~~--------------~~~~-~ivVv~~~~~~~~~~ 67 (231)
T 3q80_A 6 GEVVAIVPAAGSGERLAVGVPKAFYQL---DGQTLIERAVDGLLDS--------------GVVD-TVVVAVPADRTDEAR 67 (231)
T ss_dssp CCEEEEEECCCCCTTTCSSSCGGGCEE---TTEEHHHHHHHHHHHT--------------SCCC-EEEEEECGGGHHHHH
T ss_pred CceEEEEECCCCCccCCCCCCceEEEE---CCeEHHHHHHHHHHhC--------------CCCC-eEEEECChHHHHHHH
Confidence 368999999999999999999999998 8999999999887631 0111 235556555546666
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCC---chHhHHHhhCchHHHHHH-CCceEEEEEc
Q 016006 98 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGN---GGVYSALKSSKLLEDMAT-RGIKYIDCYG 173 (397)
Q Consensus 98 ~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~---Ggi~~~L~~sg~l~~l~~-~G~eyv~v~~ 173 (397)
+++.. .+.+. +.|. .+++.+|.. +.. .+.++++|+.
T Consensus 68 ~~~~~---------~v~~v-------------------------~gg~~r~~sv~~gl~~------~~~~~~~d~Vlv~~ 107 (231)
T 3q80_A 68 QILGH---------RAMIV-------------------------AGGSNRTDTVNLALTV------LSGTAEPEFVLVHD 107 (231)
T ss_dssp HHHGG---------GCEEE-------------------------ECCSSHHHHHHHHHGG------GC---CCSEEEECC
T ss_pred HHhcC---------CeEEE-------------------------cCCCchHHHHHHHHHH------hhhcCCCCEEEEEc
Confidence 66643 12222 2222 334555432 111 1357999999
Q ss_pred CCCccccccccccchhhhc---cCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeec
Q 016006 174 VDNALVRVADPTFLGYFID---KGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCW 250 (397)
Q Consensus 174 vDN~l~~~~Dp~~lg~~~~---~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~ 250 (397)
.|.++. +|..+-.+++ .+.+.++-+++-.++ ++ ..+.+|. |.+.-+ +..++.
T Consensus 108 ~d~Pli---~~~~i~~li~~~~~~~~~~i~~~p~~dt---~~---~~~~~g~--v~~~~~--------------r~~l~~ 162 (231)
T 3q80_A 108 AARALT---PPALVARVVEALRDGYAAVVPVLPLSDT---IK---AVDANGV--VLGTPE--------------RAGLRA 162 (231)
T ss_dssp TTCTTC---CHHHHHHHHHHHHTTCSEEEEEECCSSC---EE---EECTTSB--EEECCC--------------GGGEEE
T ss_pred CCcCCC---CHHHHHHHHHHHhhcCCeEEEEEeccCC---EE---EEcCCCc--EEEecc--------------hhheEE
Confidence 999985 4544433322 235565555554433 12 1223453 233211 112344
Q ss_pred cceeeeEeehHHHHHHhhc
Q 016006 251 SNVCLHMFTLDFLNQVANG 269 (397)
Q Consensus 251 ~Ni~~~~~~l~~L~~~~~~ 269 (397)
.|+ -..|+.+.|.+....
T Consensus 163 ~qT-Pq~F~~~~L~~a~~~ 180 (231)
T 3q80_A 163 VQT-PQGFTTDLLLRSYQR 180 (231)
T ss_dssp ECS-CEEEEHHHHHHHHHH
T ss_pred EcC-CcEEEHHHHHHHHHH
Confidence 565 479999999887653
No 43
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.29 E-value=6e-06 Score=82.06 Aligned_cols=167 Identities=19% Similarity=0.187 Sum_probs=102.0
Q ss_pred EEEEecCCCCCcCC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHH
Q 016006 21 AVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 97 (397)
Q Consensus 21 avviLaGG~GTRLg---~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~ 97 (397)
.+|+||||.||||+ ...||.++|+ .|++++++.++++.+ .++. .++|.|+.. ++
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~ll~i---~g~pli~~~l~~l~~---------------~~~~-~i~vv~~~~----i~ 58 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKAFVPI---LSKPLIEYQIEYLRK---------------CGIR-DITVIVSSK----NK 58 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEECGG----GH
T ss_pred eEEEEcCcCccccCcccCCCCcceeeE---CCEeHHHHHHHHHHH---------------CCCC-EEEEEeCHH----HH
Confidence 47999999999997 4679999999 899999999988763 1211 235555544 67
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHCCceEEEEEcCCCc
Q 016006 98 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 177 (397)
Q Consensus 98 ~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~ 177 (397)
+++++.. ..+.+..++ . .|.|.++.+....+ -+++++.+.|++
T Consensus 59 ~~~~~~~------~~i~~~~~~-------------------~-~~~g~~~~l~~~~~-----------~~~~lv~~~D~~ 101 (401)
T 2ggo_A 59 EYFEKKL------KEISIVTQK-------------------D-DIKGTGAAILSAKF-----------NDEALIIYGDLF 101 (401)
T ss_dssp HHHHHHC------TTCEEEECC-------------------T-TCCBSTTTGGGCCC-----------SSEEEEEETTEE
T ss_pred HHhhccC------CcEEEEeCC-------------------C-CCCChHHHHHHhcc-----------CCCEEEEeCccc
Confidence 7776531 124433222 0 25566655543321 378899999998
Q ss_pred cccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCCceeeeccceeeeE
Q 016006 178 LVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHM 257 (397)
Q Consensus 178 l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g~~~f~~~Ni~~~~ 257 (397)
+. +|..+..+.+ +.+.++-+.+..++. +.|++..+ .+|+ +.++.+-+.. + . ....|+++++
T Consensus 102 ~~---~~~~~~~l~~-~~~~~i~~~~~~~~~-~~~~v~~~-~~g~--v~~~~ek~~~-------~--~--~~~~~~Giy~ 162 (401)
T 2ggo_A 102 FS---NEKEICNIIT-LKENAIIGVKVSNPK-DYGVLVLD-NQNN--LSKIIEKPEI-------P--P--SNLINAGIYK 162 (401)
T ss_dssp ES---CSHHHHHHTT-CSSEEEEEEECSCCS-SSCEEEEC-TTSS--EEEEECSCSS-------C--S--CSEEEEEEEE
T ss_pred cc---cHHHHHHHHH-hcCCEEEEEEcCCCc-ceeEEEEC-CCCe--EEEEEECCCC-------C--C--CcEEEEEEEE
Confidence 63 2444444443 455665555544443 45666654 3453 4566553321 0 0 1235788899
Q ss_pred eehHHHHHH
Q 016006 258 FTLDFLNQV 266 (397)
Q Consensus 258 ~~l~~L~~~ 266 (397)
|+.+.++.+
T Consensus 163 ~~~~~~~~l 171 (401)
T 2ggo_A 163 LNSDIFTYL 171 (401)
T ss_dssp EETHHHHHH
T ss_pred EcHHHHHHh
Confidence 999988654
No 44
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=98.28 E-value=2.8e-06 Score=77.79 Aligned_cols=65 Identities=17% Similarity=0.243 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCcCCC-CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 20 LAVLLLSGGQGTRLGS-SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 20 vavviLaGG~GTRLg~-~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
+.+||||||.|||||. +.||.++|+ .|++++++.++++... .++. .++|.|.....+.+.+
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~l~~i---~g~pli~~~l~~l~~~--------------~~~~-~i~vv~~~~~~~~~~~ 64 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQFLEL---GDRPILIHTIEKFVLE--------------PSIE-KIVVGVHGDWVSHAED 64 (236)
T ss_dssp EEEEEEEC-----------CGGGSEE---TTEEHHHHHHHHHHTC--------------TTCC-CEEEEECGGGHHHHHH
T ss_pred eEEEEeCCccccccCCCCCCCeeeee---CCccHHHHHHHHHHcC--------------CCCC-eEEEEeCHHHHHHHHH
Confidence 5789999999999996 679999998 7999999988887620 0111 2355565544477888
Q ss_pred HHhh
Q 016006 99 YFEG 102 (397)
Q Consensus 99 ~~~~ 102 (397)
++++
T Consensus 65 ~~~~ 68 (236)
T 2vsh_A 65 LVDK 68 (236)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8865
No 45
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=98.27 E-value=1e-05 Score=74.32 Aligned_cols=39 Identities=28% Similarity=0.491 Sum_probs=29.0
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++.+|+||||.|||||.. ||.++|+ .|++++++.++++.
T Consensus 18 ~~~~iIlA~G~g~R~~~~-~K~l~~i---~g~pli~~~l~~l~ 56 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-PKPLVRV---GGCEIILRTMKLLS 56 (232)
T ss_dssp CEEEEEEECC------CC-CGGGCEE---TTEEHHHHHHHHHG
T ss_pred cceEEEECCcCcCcCCCC-CcEEeEE---CCEEHHHHHHHHHH
Confidence 588999999999999855 9999998 79999999888775
No 46
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=98.23 E-value=2.5e-06 Score=78.13 Aligned_cols=41 Identities=27% Similarity=0.410 Sum_probs=28.0
Q ss_pred CCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 18 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 18 gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
.++.+||||||.|||||.+.||.++|+ .|+|++++.++++.
T Consensus 5 ~~~~aiIlA~G~g~R~~~~~~K~l~~~---~gkpli~~~l~~l~ 45 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGADKPKQYVEI---GSKTVLEHVLGIFE 45 (231)
T ss_dssp CCEEEEEECC----------CCSCCEE---TTEEHHHHHHHHHH
T ss_pred CceEEEEEcccccccCCCCCCceEeEE---CCeEHHHHHHHHHH
Confidence 468899999999999998779999998 79999999988876
No 47
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=98.23 E-value=5.2e-06 Score=73.86 Aligned_cols=104 Identities=18% Similarity=0.126 Sum_probs=67.5
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 98 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~ 98 (397)
++.+||||||.||||| .||.++|+ .|++++++.++++.. .++. .++|.|+ +..+.+.+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pli~~~l~~l~~---------------~~~~-~i~vv~~-~~~~~~~~ 62 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQLLPL---GDTTLLGATLAMARR---------------CPFD-QLIVTLG-GAADEVLE 62 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGGGCEE---TTEEHHHHHHHHHHT---------------SSCS-EEEEEEC-TTHHHHHH
T ss_pred ceEEEEECCCCCCCCC--CCEEeCEe---CccCHHHHHHHHHHh---------------CCCC-cEEEEeC-CCHHHHHH
Confidence 5889999999999998 69999998 799999998888762 1211 2355554 44567777
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCC-chHhHHHhhCchHHHHHHCCceEEEEEcCCCc
Q 016006 99 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGN-GGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 177 (397)
Q Consensus 99 ~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~-Ggi~~~L~~sg~l~~l~~~G~eyv~v~~vDN~ 177 (397)
++++ +|+ .++.+. ..+.|. ++++.++.. + ..+.++++|+.+|++
T Consensus 63 ~~~~---~~~-----~~~~~~--------------------~~~~g~~~~i~~al~~------~-~~~~~~vlv~~~D~P 107 (199)
T 2waw_A 63 KVEL---DGL-----DIVLVD--------------------DAGLGCSSSLKSALTW------V-DPTAEGIVLMLGDQP 107 (199)
T ss_dssp HSCC---TTS-----EEEECC--------------------CCCTTCCCHHHHHHHT------S-CTTCSEEEEEETTCT
T ss_pred Hhcc---CCC-----EEEECC--------------------CcccCHHHHHHHHHHh------h-hccCCeEEEEeCCcc
Confidence 7654 232 222111 013453 445555432 1 125689999999999
Q ss_pred cc
Q 016006 178 LV 179 (397)
Q Consensus 178 l~ 179 (397)
+.
T Consensus 108 ~~ 109 (199)
T 2waw_A 108 GI 109 (199)
T ss_dssp TC
T ss_pred cC
Confidence 74
No 48
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=98.21 E-value=1.8e-06 Score=77.24 Aligned_cols=61 Identities=28% Similarity=0.559 Sum_probs=43.8
Q ss_pred EEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCccchHHHHHHH
Q 016006 21 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYF 100 (397)
Q Consensus 21 avviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl~IMtS~~t~~~t~~~~ 100 (397)
.+||||||.|||||. .||.+.|+ .|+|++++.++++.. .++. .++|.|+.. ++.+.+++
T Consensus 2 ~aiIlA~G~s~R~~~-~~K~l~~~---~g~pli~~~l~~l~~---------------~~~~-~v~vv~~~~-~~~i~~~~ 60 (196)
T 3rsb_A 2 DALIMAGGKGTRMGG-VEKPLIKL---CGRCLIDYVVSPLLK---------------SKVN-NIFIATSPN-TPKTKEYI 60 (196)
T ss_dssp EEEEEC----CGGGG-SCGGGCEE---TTEEHHHHHHHHHHS---------------SSCC-CEEEECCTT-CHHHHHHH
T ss_pred EEEEECCCCCCcCCC-CCccEEEE---CCEEHHHHHHHHHHH---------------CCCC-EEEEEeCCC-hHHHHHHH
Confidence 578999999999987 79999998 899999999988762 1211 235555554 78899999
Q ss_pred hh
Q 016006 101 EG 102 (397)
Q Consensus 101 ~~ 102 (397)
++
T Consensus 61 ~~ 62 (196)
T 3rsb_A 61 NS 62 (196)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 49
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=98.16 E-value=4.6e-06 Score=74.20 Aligned_cols=39 Identities=18% Similarity=0.350 Sum_probs=35.0
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILC 62 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~ 62 (397)
++.+||||||.||||| .||.++|+ .|++++++.++++..
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pll~~~l~~l~~ 43 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQLLPY---RDTTVLGATLDVARQ 43 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGGGSEE---TTEEHHHHHHHHHHH
T ss_pred ceEEEEECCCCcccCC--CCeEcCee---CCccHHHHHHHHHHh
Confidence 5789999999999997 79999998 799999999888763
No 50
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=98.15 E-value=3.6e-06 Score=75.88 Aligned_cols=38 Identities=21% Similarity=0.378 Sum_probs=33.9
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++.+||||||.|||||. ||.++|+ .|+|++++.++++.
T Consensus 2 ~~~~iIlAgG~g~Rmg~--~K~l~~i---~g~pll~~~l~~l~ 39 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG--DKLLAKI---DNTPIIMRTIRIYG 39 (197)
T ss_dssp CEEEEEECSCCTTCCCS--SGGGSBS---SSSBHHHHHHHHTT
T ss_pred ceEEEEECCcCcccCCC--CeeeCEe---CceEHHHHHHHHHH
Confidence 47889999999999985 9999998 89999999888765
No 51
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=98.14 E-value=4.2e-06 Score=76.82 Aligned_cols=40 Identities=30% Similarity=0.576 Sum_probs=36.6
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
.+.+||||||.|||||.+.||.+.|+ .|+|++++.++++.
T Consensus 13 ~~~aiILAaG~s~Rm~~~~~K~l~~i---~Gkpli~~~i~~l~ 52 (234)
T 1vpa_A 13 MNVAILLAAGKGERMSENVPKQFLEI---EGRMLFEYPLSTFL 52 (234)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGCEE---TTEETTHHHHHHHH
T ss_pred cCeEEEEcCcchhhcCCCCCceEEEE---CCeEHHHHHHHHHH
Confidence 47899999999999998789999998 89999999998876
No 52
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=98.07 E-value=5.4e-06 Score=76.36 Aligned_cols=40 Identities=18% Similarity=0.439 Sum_probs=36.6
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++.+||||||.|||||.+.||.++|+ .|+|++++.++++.
T Consensus 7 ~~~~iIlA~G~g~R~~~~~~K~l~~i---~g~pll~~~i~~l~ 46 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQTECPKQYLSI---GNQTILEHSVHALL 46 (236)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred ceeEEEECCcCccccCCCCCcceeeE---CCEEHHHHHHHHHH
Confidence 58899999999999997789999998 79999999988876
No 53
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=97.92 E-value=5.7e-05 Score=68.96 Aligned_cols=37 Identities=35% Similarity=0.523 Sum_probs=33.3
Q ss_pred EEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 20 LAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 20 vavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
+.+||||||.||||| .||.++++ .|+|++++.++.+.
T Consensus 1 m~aiILAgG~s~Rmg--~~K~ll~~---~G~pli~~~~~~l~ 37 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG--MEKTEVML---CGKKLIEWVLEKYS 37 (208)
T ss_dssp CEEEEECCCCCTTTT--SCGGGCEE---TTEEHHHHHHHHHT
T ss_pred CEEEEECCCchhhCC--CCCcccEE---CCeeHHHHHHHHhc
Confidence 368999999999999 79999998 89999999888775
No 54
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=97.91 E-value=1.9e-05 Score=72.81 Aligned_cols=39 Identities=23% Similarity=0.511 Sum_probs=32.6
Q ss_pred CEEEEEecCCC---CCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQ---GTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~---GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++.+||||||. |+||| ..||.++|+ .|+|++++.++++.
T Consensus 2 ~~~~vIlAaG~tRl~~r~~-~~~K~l~~i---~g~pll~~~l~~l~ 43 (232)
T 2dpw_A 2 RPSAIVLAGGKEAWAERFG-VGSKALVPY---RGRPMVEWVLEALY 43 (232)
T ss_dssp CCEEEEECCCBCSGGGTTT-CSBGGGSEE---TTEETHHHHHHHHH
T ss_pred ceeEEEECCCCCccccccC-CCCceeeEE---CCEEHHHHHHHHHH
Confidence 46789999999 55555 369999998 89999999998876
No 55
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=97.82 E-value=1.7e-05 Score=72.49 Aligned_cols=40 Identities=30% Similarity=0.479 Sum_probs=30.4
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++.+||||||.|||||.+.||.++|+ .|+|++++.++++.
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~l~~i---~g~pli~~~l~~l~ 43 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQYIPL---LGQPIALYSFFTFS 43 (228)
T ss_dssp CEEEEEECCCCC-------CGGGSEE---TTEEHHHHHHHHHH
T ss_pred ceEEEEECCccccccCCCCCccEeEE---CCEEHHHHHHHHHH
Confidence 68899999999999997789999998 89999999988876
No 56
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=97.70 E-value=6.2e-05 Score=74.92 Aligned_cols=40 Identities=15% Similarity=0.419 Sum_probs=36.5
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++++||||||.|||||.+.||.+.|+ .|+|++++.++++.
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~ll~l---~GkPLi~~~l~~l~ 42 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQFLRL---GNDPLWLYATKNLS 42 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGGGCEE---BTEEHHHHHHHHHH
T ss_pred ccEEEEECCCCCccCCCCCCcceEEE---CCeEHHHHHHHHHH
Confidence 57899999999999997789999998 79999999988876
No 57
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=97.63 E-value=5.2e-05 Score=68.41 Aligned_cols=38 Identities=26% Similarity=0.383 Sum_probs=34.3
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++.+||||||.||||| .||.++|+ .|++++++.++++.
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~ll~i---~g~pll~~~l~~l~ 51 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKLLYEI---KGKKVIERVYETAK 51 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHHHHHH---HHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCccCC--CCcccceE---CceEHHHHHHHHHH
Confidence 4688999999999998 79999998 79999999888876
No 58
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=97.53 E-value=4.4e-05 Score=70.63 Aligned_cols=41 Identities=27% Similarity=0.549 Sum_probs=27.6
Q ss_pred ccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHH
Q 016006 15 ISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAER 59 (397)
Q Consensus 15 i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~ 59 (397)
++.-++++||||||.|||||.+ ||.++|+ .|+|++++.+++
T Consensus 21 ~~~M~~~aiILAgG~s~Rm~~~-~K~l~~i---~gkpli~~~l~~ 61 (236)
T 2px7_A 21 DKHMEVSVLIPAAGNGLRLGRG-PKAFLQV---GGRTLLEWTLAA 61 (236)
T ss_dssp ---CCCEEEEECCC-------C-CGGGCBC---SSSBHHHHHHHH
T ss_pred ccCCceEEEEEcCCCCccCCCC-CCeEEEE---CCEEHHHHHHHh
Confidence 3334688999999999999976 9999998 899999998877
No 59
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=97.44 E-value=8.7e-05 Score=67.02 Aligned_cols=39 Identities=31% Similarity=0.656 Sum_probs=35.3
Q ss_pred CEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHH
Q 016006 19 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61 (397)
Q Consensus 19 kvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~ 61 (397)
++.+||||||.||||| ..||.++|+ .|++++++.++++.
T Consensus 6 ~~~~iILAgG~s~Rmg-~~~K~ll~i---~G~pli~~~l~~l~ 44 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG-GVDKGLLEL---NGKPLWQHVADALM 44 (201)
T ss_dssp SEEEEEECCCCCSSSC-SSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred cceEEEEcCCCCCcCC-CCCCceeeE---CceeHHHHHHHHHH
Confidence 5889999999999998 579999998 79999999998876
Done!