BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016009
(397 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 144/289 (49%), Gaps = 16/289 (5%)
Query: 119 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
E+ A+++F + +G GG G VY+ L G +VA+K+ + +F TEVE
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL---QFQTEVEM 88
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE-LGWSQRMNVIKGV 237
++ HRN+++L GFC LVY ++ G Q L W +R + G
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 148
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK-PDSSNWTEFAGTYG 296
A L+YLH C P I+HRD+ + N+LLD EFEA V DFG+AK + D GT G
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS---------SFLNTDIE 347
++APE T K +EK DV+ +GV+ LE+I G+ D + L + +
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 268
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
L+ ++D L + E++ +++V C SP RP M V + L+
Sbjct: 269 LEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 143/289 (49%), Gaps = 16/289 (5%)
Query: 119 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
E+ A+++F + +G GG G VY+ L G +VA+K+ + +F TEVE
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQG---GELQFQTEVEM 80
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE-LGWSQRMNVIKGV 237
++ HRN+++L GFC LVY ++ G Q L W +R + G
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 140
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK-PDSSNWTEFAGTYG 296
A L+YLH C P I+HRD+ + N+LLD EFEA V DFG+AK + D G G
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS---------FLNTDIE 347
++APE T K +EK DV+ +GV+ LE+I G+ D + L + +
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
L+ ++D L + E++ +++V C SP RP M V + L+
Sbjct: 261 LEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 23/290 (7%)
Query: 119 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
++ ATN+FD ++ IG+G G VY+ L G VA+K+ +P S +EF TE+E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQ---GIEEFETEIET 88
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-XQELGWSQRMNVIKGV 237
L+ RH ++V L GFC L+Y++++ G + W QR+ + G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA----G 293
A L YLH I+HRD+ S N+LLD F + DFGI+K K + T G
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKG 203
Query: 294 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKH------PRDFLSSISSSF-LNTDI 346
T GY+ PE ++TEK DVYSFGV+ EV+ + PR+ ++ + + +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 347 ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+L++++DP L R E LR + CL S E RP+M V +L+
Sbjct: 264 QLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 23/290 (7%)
Query: 119 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
++ ATN+FD ++ IG+G G VY+ L G VA+K+ +P S +EF TE+E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQ---GIEEFETEIET 88
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-XQELGWSQRMNVIKGV 237
L+ RH ++V L GFC L+Y++++ G + W QR+ + G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA----G 293
A L YLH I+HRD+ S N+LLD F + DFGI+K K T G
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKG 203
Query: 294 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKH------PRDFLSSISSSF-LNTDI 346
T GY+ PE ++TEK DVYSFGV+ EV+ + PR+ ++ + + +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 347 ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+L++++DP L R E LR + CL S E RP+M V +L+
Sbjct: 264 QLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 119 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEF 172
E+ TN+FD + +G GG G VY+ + + VA+KK + + K++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 173 LTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
E++ + + +H N+V+L GF S LVY ++ G L W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK--PDSSNWTE 290
+ +G A+ +++LH + +HRDI S N+LLD F A ++DFG+A+ + + +
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 291 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLSSISSSFLN 343
GT Y+APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 195 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D + A S SV+ ++ V CL+E RP +K V Q LQ
Sbjct: 254 EKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 119 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEF 172
E+ TN+FD + +G GG G VY+ + + VA+KK + + K++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 173 LTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
E++ + + +H N+V+L GF S LVY ++ G L W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK--PDSSNWTE 290
+ +G A+ +++LH + +HRDI S N+LLD F A ++DFG+A+ + +
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 291 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLSSISSSFLN 343
GT Y+APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 195 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D + A S SV+ ++ V CL+E RP +K V Q LQ
Sbjct: 254 EKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 138/293 (47%), Gaps = 24/293 (8%)
Query: 119 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEF 172
E+ TN+FD + +G GG G VY+ + + VA+KK + + K++F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 71
Query: 173 LTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
E++ + + +H N+V+L GF S LVY ++ G L W R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 131
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTE 290
+ +G A+ +++LH + +HRDI S N+LLD F A ++DFG+A+ + +
Sbjct: 132 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 291 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLSSISSSFLN 343
GT Y+APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 189 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 247
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D + A S SV+ ++ V CL+E RP +K V Q LQ
Sbjct: 248 EKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 133/293 (45%), Gaps = 24/293 (8%)
Query: 119 EIVRATNDFDAQYC------IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEF 172
E+ TN+FD + G GG G VY+ + + VA+KK + + K++F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 68
Query: 173 LTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
E++ + +H N+V+L GF S LVY + G L W R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCK 128
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK--PDSSNWTE 290
+ +G A+ +++LH + +HRDI S N+LLD F A ++DFG+A+ + +
Sbjct: 129 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 291 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLSSISSSFLN 343
GT Y APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 186 IVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 244
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D + A S SV+ + V CL+E RP +K V Q LQ
Sbjct: 245 EKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 32/297 (10%)
Query: 109 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIK-----KFHSPLPS 163
L F+G + D++ D + + IG G G+V+RAE G VA+K FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 164 DQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQ 223
+++ EFL EV + +RH NIV G + + +V E+L RG +
Sbjct: 76 ERV---NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 224 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283
+L +R+++ VA ++YLH+ PPIVHRD+ S NLL+D ++ V DFG+++
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS 191
Query: 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSS----ISS 339
AGT ++APE+ EK DVYSFGV+ E+ + P L+ +
Sbjct: 192 XFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
Query: 340 SFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
F +E+ L+P++ A ++ C P RP+ + L+
Sbjct: 252 GFKCKRLEIPRNLNPQVAA--------------IIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 32/297 (10%)
Query: 109 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIK-----KFHSPLPS 163
L F+G + D++ D + + IG G G+V+RAE G VA+K FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 164 DQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQ 223
+++ EFL EV + +RH NIV G + + +V E+L RG +
Sbjct: 76 ERV---NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 224 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283
+L +R+++ VA ++YLH+ PPIVHR++ S NLL+D ++ V DFG+++
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191
Query: 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSS----ISS 339
+ AGT ++APE+ EK DVYSFGV+ E+ + P L+ +
Sbjct: 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
Query: 340 SFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
F +E+ L+P++ A ++ C P RP+ + L+
Sbjct: 252 GFKCKRLEIPRNLNPQVAA--------------IIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 27/284 (9%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKF---HSPLPSDQIVDKKEFLTEVEA 178
A N+ + + IG GG G V++ L + VVAIK S ++ I +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
++ + H NIVKLYG + +V EF+ G + WS ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFE-----AHVADFGIAKFLKPDSSNWTEFAG 293
+ Y+ + PPIVHRD+ S N+ L E A VADFG+++ + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSVSGLLG 188
Query: 294 TYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351
+ ++APE A TEK D YSF ++ ++ G+ P D S F+N E E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE--EG 246
Query: 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
L P +P +LR+++E+ C + P+ RP + ++L
Sbjct: 247 LRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 134/284 (47%), Gaps = 27/284 (9%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKF---HSPLPSDQIVDKKEFLTEVEA 178
A N+ + + IG GG G V++ L + VVAIK S ++ I +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
++ + H NIVKLYG + +V EF+ G + WS ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFE-----AHVADFGIAKFLKPDSSNWTEFAG 293
+ Y+ + PPIVHRD+ S N+ L E A VADFG ++ + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSVSGLLG 188
Query: 294 TYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351
+ ++APE A TEK D YSF ++ ++ G+ P D S F+N E E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE--EG 246
Query: 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
L P +P +LR+++E+ C + P+ RP + ++L
Sbjct: 247 LRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 27/261 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G+G G V + VA+K + + + + EF E + + ++ H +VK YG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK-----MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
CS ++V E++ G E SQ + + V + +++L F
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--SQLLEMCYDVCEGMAFLESHQF--- 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L+D + V+DFG+ +++ D SS T+F + APE+ + K +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS--APEVFHYFKYS 183
Query: 310 EKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
K DV++FG+L EV GK P D + N+++ L RL P +
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDL-------YTNSEVVLKVSQGHRLYRPHLASD---- 232
Query: 369 SIVEVVFSCLNESPESRPTMK 389
+I ++++SC +E PE RPT +
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQ 253
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 27/284 (9%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKF---HSPLPSDQIVDKKEFLTEVEA 178
A N+ + + IG GG G V++ L + VVAIK S ++ I +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
++ + H NIVKLYG + +V EF+ G + WS ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFE-----AHVADFGIAKFLKPDSSNWTEFAG 293
+ Y+ + PPIVHRD+ S N+ L E A VADF +++ + + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSVSGLLG 188
Query: 294 TYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351
+ ++APE A TEK D YSF ++ ++ G+ P D S F+N E E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE--EG 246
Query: 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
L P +P +LR+++E+ C + P+ RP + ++L
Sbjct: 247 LRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 29/273 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDK--KEFLTEVEALTEIRHRNIVKL 190
IG GG G VYRA +V H P D+ + + + E + ++H NI+ L
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDP---DEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
G C + LV EF + G ++ +N +A ++YLH +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHDEAIV 127
Query: 251 PIVHRDISSKNLLLDLEFE--------AHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
PI+HRD+ S N+L+ + E + DFG+A+ + AG Y ++APE+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAWMAPEV 185
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
++ DV+S+GVL E++ G+ P + ++ ++ + ++++ LP PS +
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY---GVAMNKL---ALPIPS-T 238
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E ++E C N P SRP+ + QL
Sbjct: 239 CPEPFAKLME---DCWNPDPHSRPSFTNILDQL 268
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 114 KLVYDEIVRATND-FDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKE 171
KL D + + + FD +G G +GSVY+A +GQ+VAIK+ P+ SD +E
Sbjct: 17 KLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDL----QE 70
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
+ E+ + + ++VK YG ++V E+ G + L +
Sbjct: 71 IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC--GAGSVSDIIRLRNKTLTEDEIA 128
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
+++ L YLH F +HRDI + N+LL+ E A +ADFG+A L +
Sbjct: 129 TILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXV 185
Query: 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351
GT ++APE+ + D++S G+ A+E+ +GK P + + + F+
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-------- 237
Query: 352 LDPRLPAPS-RSVQEKLRSIVEVVFSCLNESPESRPT 387
P P P+ R + + + V CL +SPE R T
Sbjct: 238 --PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT 272
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ RG E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANA 125
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS TE GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ RG E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANA 125
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPP 180
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 64
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T+ GT Y+ P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 176
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T+ GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T+ GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T+ GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 180
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 67
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 124
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 179
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 118 DEIVRA-TNDFDAQYC-----IGNGGHGSVYRAELPSG----QVVAIKKFHSPLPSDQIV 167
+E VR + D Y IG G G V R L + VAIK Q
Sbjct: 3 NEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-- 60
Query: 168 DKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW 227
++EFL+E + + H NI++L G +++ ++ EF++ G +
Sbjct: 61 -RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--QFTV 117
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
Q + +++G+A + YL + VHRD++++N+L++ V+DFG+++FL+ +SS+
Sbjct: 118 IQLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 288 WTEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSF 341
TE + G + APE K T D +S+G++ EV+ G+ P +S+
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQD 231
Query: 342 LNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ IE D L P P+ S+ +++ C + +RP V L
Sbjct: 232 VINAIEQDYRLPPPPDCPT--------SLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 89
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 146
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 201
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 80
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 137
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 138 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 192
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 62
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 119
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 120 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 174
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 29/294 (9%)
Query: 109 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIV 167
L F+G YD+ D ++ +G G +G VY + VA+K + +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTM 64
Query: 168 DKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW 227
+ +EFL E + EI+H N+V+L G C+ +++ EF+ G QE+
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNA 123
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
+ + ++ A+ YL F +HRD++++N L+ VADFG+++ + D+
Sbjct: 124 VVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-- 178
Query: 288 WTEFAGT---YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
+T AG + APE LAY K + K DV++FGVL E+ G P + L
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------L 231
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ EL E D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 232 SQVYELLEK-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 64
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + SS T +GT Y+ P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPP 176
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V + VAIK + + + + EF+ E + + + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C+ R F++ E++ G + Q + + K V +A+ YL F
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQF--- 141
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
+HRD++++N L++ + V+DFG+++++ D E+ + G + PE+
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 196
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
K + K D+++FGVL E+ GK P + F N++ RL P + ++
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLASEK 249
Query: 366 KLRSIVEVVFSCLNESPESRPTMKIV 391
+ +++SC +E + RPT KI+
Sbjct: 250 ----VYTIMYSCWHEKADERPTFKIL 271
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V + VAIK + + + + EF+ E + + + H +V+LYG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C+ R F++ E++ G + Q + + K V +A+ YL F
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQF--- 132
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
+HRD++++N L++ + V+DFG+++++ D E+ + G + PE+
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 187
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
K + K D+++FGVL E+ GK P + F N++ RL P + ++
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLASEK 240
Query: 366 KLRSIVEVVFSCLNESPESRPTMKIV 391
+ +++SC +E + RPT KI+
Sbjct: 241 ----VYTIMYSCWHEKADERPTFKIL 262
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 27/263 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V + VAIK + + + + EF+ E + + + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C+ R F++ E++ G + Q + + K V +A+ YL F
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQF--- 126
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L++ + V+DFG+++++ D SS ++F + PE+ K +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS--PPEVLMYSKFS 184
Query: 310 EKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
K D+++FGVL E+ GK P + F N++ RL P + ++
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLASEK--- 234
Query: 369 SIVEVVFSCLNESPESRPTMKIV 391
+ +++SC +E + RPT KI+
Sbjct: 235 -VYTIMYSCWHEKADERPTFKIL 256
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V + VAIK + + + + EF+ E + + + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C+ R F++ E++ G + Q + + K V +A+ YL F
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQF--- 126
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
+HRD++++N L++ + V+DFG+++++ D E+ + G + PE+
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 181
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
K + K D+++FGVL E+ GK P + F N++ RL P + ++
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLASEK 234
Query: 366 KLRSIVEVVFSCLNESPESRPTMKIV 391
+ +++SC +E + RPT KI+
Sbjct: 235 ----VYTIMYSCWHEKADERPTFKIL 256
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V + VAIK + + + + EF+ E + + + H +V+LYG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C+ R F++ E++ G + Q + + K V +A+ YL F
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQF--- 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
+HRD++++N L++ + V+DFG+++++ D E+ + G + PE+
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 180
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
K + K D+++FGVL E+ GK P + F N++ RL P + ++
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLASEK 233
Query: 366 KLRSIVEVVFSCLNESPESRPTMKIV 391
+ +++SC +E + RPT KI+
Sbjct: 234 ----VYTIMYSCWHEKADERPTFKIL 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 68
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS T GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E EK D++S GVL E + GK P
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 89
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 146
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS + GT Y+ P
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 201
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS + GT Y+ P
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 178
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V + VAIK + + + + EF+ E + + + H +V+LYG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C+ R F++ E++ G Q + + K V +A+ YL F
Sbjct: 67 VCTKQRPIFIITEYMANG--CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 121
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
+HRD++++N L++ + V+DFG+++++ D E+ + G + PE+
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYS 176
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
K + K D+++FGVL E+ GK P + F N++ RL P + ++
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLASEK 229
Query: 366 KLRSIVEVVFSCLNESPESRPTMKIV 391
+ +++SC +E + RPT KI+
Sbjct: 230 ----VYTIMYSCWHEKADERPTFKIL 251
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALTEI 182
DFD +G G G+VY A E S ++A+K F + L + + + EVE + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV--EHQLRREVEIQSHL 69
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
RH NI++LYG+ A +L+ E+ G E + I +A+ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALS 126
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H ++HRDI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHP 330
EK D++S GVL E + G P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
A DF+ +G G G+VY A + + K ++ + + EVE + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
RH NI++LYG+ A +L+ E+ G E + I +A+ALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 119
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H ++HRDI +NLLL E +ADFG + + SS T GT Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHP 330
EK D++S GVL E + GK P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 65
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 122
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +A+FG + + SS T GT Y+ P
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 177
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 27/263 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V + VAIK + + + + EF+ E + + + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK-----MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C+ R F++ E++ G + Q + + K V +A+ YL F
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQF--- 141
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L++ + V+DFG+++++ D SS ++F + PE+ K +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWS--PPEVLMYSKFS 199
Query: 310 EKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
K D+++FGVL E+ GK P + F N++ RL P + ++
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLASEK--- 249
Query: 369 SIVEVVFSCLNESPESRPTMKIV 391
+ +++SC +E + RPT KI+
Sbjct: 250 -VYTIMYSCWHEKADERPTFKIL 271
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +A+FG + + SS T GT Y+ P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 178
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 65
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 122
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 177
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 66
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 178
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 64
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ A +L+ E+ G E + I +A+A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPP 176
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 30/243 (12%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
++ FL EV+ + + H N++K G + + E++K G + WS
Sbjct: 51 QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD--SQYPWS 108
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL------- 281
QR++ K +A ++YLH I+HRD++S N L+ VADFG+A+ +
Sbjct: 109 QRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 282 -------KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDF 333
KPD G ++APE+ EK DV+SFG++ E+I + D+
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225
Query: 334 LSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393
L LN LD P P S + C + PE RP+ +
Sbjct: 226 LPRTMDFGLNVRGFLDRYCPPNCPP----------SFFPITVRCCDLDPEKRPSFVKLEH 275
Query: 394 QLQ 396
L+
Sbjct: 276 WLE 278
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G+VY A ++ +GQ VAI++ + Q K+ + E+ + E ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
++V E+L G + Q V + AL +LH +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---Q 136
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
++HRDI S N+LL ++ + DFG + P+ S +E GT ++APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 312 CDVYSFGVLALEVIKGKHP 330
D++S G++A+E+I+G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 29/264 (10%)
Query: 133 IGNGGHGSVYRAELPSG----QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
IG G G V R L + VAIK Q ++EFL+E + + H NI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ---RREFLSEASIMGQFEHPNII 78
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G +++ ++ EF++ G + Q + +++G+A + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--QFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG-----YVAPELA 303
+ VHRD++++N+L++ V+DFG+++FL+ +SS+ T + G + APE
Sbjct: 137 Y---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 304 YTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K T D +S+G++ EV+ G+ P +S+ + IE D L P P+
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQDVINAIEQDYRLPPPPDCPT-- 248
Query: 363 VQEKLRSIVEVVFSCLNESPESRP 386
S+ +++ C + +RP
Sbjct: 249 ------SLHQLMLDCWQKDRNARP 266
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G V+ + VAIK S++ +F+ E E + ++ H +V+LYG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 72
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C LV+EF++ G + + V + ++YL C +
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L+ V+DFG+ +F+ D SS T+F + +PE+ + +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYS 185
Query: 310 EKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELD-EMLDPRLPAPSRSVQEKL 367
K DV+SFGVL EV +GK P + + S+S + DI + PRL +
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAST-------- 234
Query: 368 RSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ +++ C E PE RP + +QL
Sbjct: 235 -HVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G V+ + VAIK S++ +F+ E E + ++ H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 69
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C LV+EF++ G + + V + ++YL C +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L+ V+DFG+ +F+ D SS T+F + +PE+ + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYS 182
Query: 310 EKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELD-EMLDPRLPAPSRSVQEKL 367
K DV+SFGVL EV +GK P + + S+S + DI + PRL +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAST-------- 231
Query: 368 RSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ +++ C E PE RP + +QL
Sbjct: 232 -HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G V+ + VAIK S++ +F+ E E + ++ H +V+LYG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 67
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C LV+EF++ G + + V + ++YL C +
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L+ V+DFG+ +F+ D SS T+F + +PE+ + +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYS 180
Query: 310 EKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELD-EMLDPRLPAPSRSVQEKL 367
K DV+SFGVL EV +GK P + + S+S + DI + PRL +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAST-------- 229
Query: 368 RSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ +++ C E PE RP + +QL
Sbjct: 230 -HVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALT 180
A DF+ +G G G+VY A E S ++A+K F + L + + + EVE +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGV--EHQLRREVEIQS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI++LYG+ + +L+ E+ G E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LSY H ++HRDI +NLLL E +ADFG + + SS GT Y+ P
Sbjct: 121 LSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E+ EK D++S GVL E + GK P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 64
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMAT 123
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 231
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 232 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G V+ AE +VA+K P + +K+F E E LT ++H +
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEH 78
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXX-------------XXXXQELGWSQRMNV 233
IVK YG C +V+E++K G ELG SQ +++
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 234 IKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG 293
+A + YL F VHRD++++N L+ + DFG+++ + S+++ G
Sbjct: 139 ASQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGG 193
Query: 294 ----TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIEL 348
++ PE K T + DV+SFGV+ E+ GK P LS NT++ +
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS-------NTEV-I 245
Query: 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ + R+ R + + +V+ C P+ R +K + + L
Sbjct: 246 ECITQGRVLERPRVCP---KEVYDVMLGCWQREPQQRLNIKEIYKILH 290
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 63
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 122
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 123 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 177
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 178 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 230
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 231 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 64
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 231
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 232 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALTEI 182
DFD +G G G+VY A E S ++A+K F + L + + + EVE + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV--EHQLRREVEIQSHL 69
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
RH NI++LYG+ A +L+ E+ G E + I +A+ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALS 126
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H ++HRDI +NLLL E +ADFG + + SS GT Y+ PE+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 181
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHP 330
EK D++S GVL E + G P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 59
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 226
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 227 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 59
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 118
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 226
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 227 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 59
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 226
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 227 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 59
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 226
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 227 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 59
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 226
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 227 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 59
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 118
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 119 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 174 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 226
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 227 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 64
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 231
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 232 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 64
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAK 178
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 231
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 232 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 61
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 120
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 175
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 228
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 229 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 64
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 124 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 178
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 179 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 231
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 232 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 60
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 119
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ T AG
Sbjct: 120 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAK 174
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 227
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 228 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 61
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 120
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 175
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 228
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 229 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 125/267 (46%), Gaps = 29/267 (10%)
Query: 130 QYCIGNGGHGSVYRA--ELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR 185
+ IG G G V +LP + VAIK S Q +++FL+E + + H
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDFLSEASIMGQFDHP 94
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
N++ L G + + ++ EF++ G + Q + +++G+A + YL
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLA 152
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG-----YVAP 300
+ VHRD++++N+L++ V+DFG+++FL+ D+S+ T + G + AP
Sbjct: 153 DMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359
E K T DV+S+G++ EV+ G+ P + + +N IE D L P + P
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVINA-IEQDYRLPPPMDCP 266
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRP 386
S ++ +++ C + RP
Sbjct: 267 S--------ALHQLMLDCWQKDRNHRP 285
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G V+ + VAIK + + + +F+ E E + ++ H +V+LYG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI-----KEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C LV+EF++ G + + V + ++YL C +
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L+ V+DFG+ +F+ D SS T+F + +PE+ + +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYS 202
Query: 310 EKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELD-EMLDPRLPAPSRSVQEKL 367
K DV+SFGVL EV +GK P + + S+S + DI + PRL +
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAST-------- 251
Query: 368 RSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ +++ C E PE RP + +QL
Sbjct: 252 -HVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 305
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 364
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HR+++++N L+ VADFG+++ + D+ +T AG
Sbjct: 365 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 419
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 420 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 472
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 473 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 263
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 322
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HR+++++N L+ VADFG+++ + D+ +T AG
Sbjct: 323 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 377
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 378 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 430
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 431 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 40/272 (14%)
Query: 130 QYCIGNGGHGSVYRAELPSGQ-----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
Q IG G G VY+ L + VAIK + Q VD FL E + + H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD---FLGEAGIMGQFSH 105
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
NI++L G S + ++ E+++ G E Q + +++G+A + YL
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYL 163
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGTYG--YVAPE 301
+ + VHRD++++N+L++ V+DFG+++ L+ D + +T G + APE
Sbjct: 164 ANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 302 LAYTMKITEKCDVYSFGVLALEVIK-GKHP------RDFLSSISSSFLNTDIELDEMLDP 354
K T DV+SFG++ EV+ G+ P + + +I+ F
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF------------- 267
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRP 386
RLP P + +I +++ C + RP
Sbjct: 268 RLPTP----MDCPSAIYQLMMQCWQQERARRP 295
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 61
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 120
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 121 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAK 175
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 176 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 228
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 229 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 60
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMAT 119
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HRD++++N L+ VADFG+++ + D+ +T AG
Sbjct: 120 QISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAK 174
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 227
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 228 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTE 175
YD+ D ++ +G G +G VY + VA+K + ++ +EFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKE 266
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
+ EI+H N+V+L G C+ +++ EF+ G QE+ + +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMAT 325
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT- 294
++ A+ YL F +HR+++++N L+ VADFG+++ + D+ +T AG
Sbjct: 326 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 380
Query: 295 --YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 381 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLE 433
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D R+ P ++ + E++ +C +P RP+ + Q +
Sbjct: 434 K-DYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G V+ + VAIK S++ +F+ E E + ++ H +V+LYG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 70
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C LV EF++ G + + V + ++YL C +
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L+ V+DFG+ +F+ D SS T+F + +PE+ + +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYS 183
Query: 310 EKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELD-EMLDPRLPAPSRSVQEKL 367
K DV+SFGVL EV +GK P + + S+S + DI + PRL +
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAST-------- 232
Query: 368 RSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ +++ C E PE RP + +QL
Sbjct: 233 -HVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G+VY A ++ +GQ VAI++ + Q K+ + E+ + E ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
++V E+L G + Q V + AL +LH +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---Q 136
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
++HRDI S N+LL ++ + DFG + P+ S + GT ++APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 312 CDVYSFGVLALEVIKGKHP 330
D++S G++A+E+I+G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G+VY A ++ +GQ VAI++ + Q K+ + E+ + E ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
++V E+L G + Q V + AL +LH +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---Q 136
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
++HRDI S N+LL ++ + DFG + P+ S + GT ++APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 312 CDVYSFGVLALEVIKGKHP 330
D++S G++A+E+I+G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G+VY A ++ +GQ VAI++ + Q K+ + E+ + E ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
++V E+L G + Q V + AL +LH +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---Q 137
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
++HRDI S N+LL ++ + DFG + P+ S + GT ++APE+ K
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 312 CDVYSFGVLALEVIKGKHP 330
D++S G++A+E+I+G+ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY--- 132
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + WT G + APE A + T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 237
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 238 PE----SLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 29/278 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
D ++ +G G +G VY + VA+K + ++ +EFL E + EI+
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKEAAVMKEIK 65
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H N+V+L G C+ +++ EF+ G QE+ + + ++ A+ Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAP 300
L F +HRD++++N L+ VADFG+++ + D+ T AG + AP
Sbjct: 125 LEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAP 179
Query: 301 E-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
E LAY K + K DV++FGVL E+ G P I S + +E D ++
Sbjct: 180 ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVYELLEKDYRMERPEGC 235
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
P + + E++ +C +P RP+ + Q +
Sbjct: 236 PEK--------VYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 14/232 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK--FHSPLPSDQIVDKKEFLTEVEALTEI 182
+DFD +G G G+VY A + + K F S L + + + + E+E + +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQSHL 72
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
RH NI+++Y + + +L+ EF RG E + ++ +ADAL
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 129
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H ++HRDI +NLL+ + E +ADFG + + S GT Y+ PE+
Sbjct: 130 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 184
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--SFLNTDIELDEML 352
EK D++ GVL E + G P D S + +N D++ L
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 236
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 14/232 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK--FHSPLPSDQIVDKKEFLTEVEALTEI 182
+DFD +G G G+VY A + + K F S L + + + + E+E + +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQSHL 71
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
RH NI+++Y + + +L+ EF RG E + ++ +ADAL
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 128
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H ++HRDI +NLL+ + E +ADFG + + S GT Y+ PE+
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 183
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--SFLNTDIELDEML 352
EK D++ GVL E + G P D S + +N D++ L
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 235
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 59/318 (18%)
Query: 109 LNFEGKL----------VYDEIVRATNDFDAQY---------CIGNGGHGSVY--RAELP 147
L F+GKL Y+E RA F + IG+G G V R +P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 148 SGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205
+ VAIK + Q +++FL+E + + H NI++L G + R + +V E
Sbjct: 74 GQRDVPVAIKALKAGYTERQ---RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
+++ G + Q + +++GV + YL + VHRD++++N+L+D
Sbjct: 131 YMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVD 185
Query: 266 LEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLAL 322
V+DFG+++ L+ D + +T G + APE + DV+SFGV+
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 323 EVIK-GKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVF 375
EV+ G+ P RD +SS+ + RLPAP ++ +++
Sbjct: 246 EVLAYGERPYWNMTNRDVISSVEEGY-------------RLPAPMGCPH----ALHQLML 288
Query: 376 SCLNESPESRPTM-KIVS 392
C ++ RP +IVS
Sbjct: 289 DCWHKDRAQRPRFSQIVS 306
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK--FHSPLPSDQIVDKKEFLTEVEALT 180
+DFD +G G G+VY A + + K F S L + + + + E+E +
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQS 69
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+RH NI+++Y + + +L+ EF RG E + ++ +ADA
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADA 126
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
L Y H ++HRDI +NLL+ + E +ADFG + + S GT Y+ P
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP 181
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--SFLNTDIELDEML 352
E+ EK D++ GVL E + G P D S + +N D++ L
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 235
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRAE----LPS--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
D ++ +G G G V+ AE LP +VA+K S +++F E E
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA----RQDFQREAEL 96
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRG------------XXXXXXXXXXXXQELG 226
LT ++H++IV+ +G C+ R +V+E+++ G LG
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
Q + V VA + YL F VHRD++++N L+ + DFG+++ + S+
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 211
Query: 287 NWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSF 341
++ G ++ PE K T + DV+SFGV+ E+ GK P LS+ +
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-- 269
Query: 342 LNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ + E+ PR P + ++ C P+ R ++K V +LQ
Sbjct: 270 IDCITQGRELERPRACPP---------EVYAIMRGCWQREPQQRHSIKDVHARLQ 315
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G V+ + VAIK S++ +F+ E E + ++ H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 69
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
C LV+EF++ G + + V + ++YL +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEE---ASV 124
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPD---SSNWTEFAGTYGYVAPELAYTMKIT 309
+HRD++++N L+ V+DFG+ +F+ D SS T+F + +PE+ + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFSRYS 182
Query: 310 EKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELD-EMLDPRLPAPSRSVQEKL 367
K DV+SFGVL EV +GK P + + S+S + DI + PRL +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAST-------- 231
Query: 368 RSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ +++ C E PE RP + +QL
Sbjct: 232 -HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
D ++ +G G +G VY + VA+K + ++ +EFL E + EI+
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKEAAVMKEIK 65
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H N+V+L G C+ +++ EF+ G QE+ + + ++ A+ Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAP 300
L F +HRD++++N L+ VADFG+++ + D+ +T AG + AP
Sbjct: 125 LEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAP 179
Query: 301 E-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
E LAY K + K DV++FGVL E+ G P I S + +E D ++
Sbjct: 180 ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVYELLEKDYRMERPEGC 235
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
P + + E++ +C +P RP+ + Q +
Sbjct: 236 PEK--------VYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 29/264 (10%)
Query: 133 IGNGGHGSVYRA--ELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
IG G G V +LP + VAIK S Q +++FL+E + + H N++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDFLSEASIMGQFDHPNVI 71
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L G + + ++ EF++ G + Q + +++G+A + YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG-----YVAPELA 303
+ VHR ++++N+L++ V+DFG+++FL+ D+S+ T + G + APE
Sbjct: 130 Y---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 304 YTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P + + +N IE D L P + PS
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVINA-IEQDYRLPPPMDCPS-- 241
Query: 363 VQEKLRSIVEVVFSCLNESPESRP 386
++ +++ C + RP
Sbjct: 242 ------ALHQLMLDCWQKDRNHRP 259
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRAE----LPS--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
D ++ +G G G V+ AE LP +VA+K S +++F E E
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA----RQDFQREAEL 73
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE------------LG 226
LT ++H++IV+ +G C+ R +V+E+++ G + LG
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
Q + V VA + YL F VHRD++++N L+ + DFG+++ + S+
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 188
Query: 287 NWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSF 341
++ G ++ PE K T + DV+SFGV+ E+ GK P LS+ +
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-- 246
Query: 342 LNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ + E+ PR P + ++ C P+ R ++K V +LQ
Sbjct: 247 IDCITQGRELERPRACPP---------EVYAIMRGCWQREPQQRHSIKDVHARLQ 292
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 59/318 (18%)
Query: 109 LNFEGKL----------VYDEIVRATNDFDAQY---------CIGNGGHGSVY--RAELP 147
L F+GKL Y+E RA F + IG+G G V R +P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 148 SGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205
+ VAIK + Q +++FL+E + + H NI++L G + R + +V E
Sbjct: 74 GQRDVPVAIKALKAGYTERQ---RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
+++ G + Q + +++GV + YL + VHRD++++N+L+D
Sbjct: 131 YMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVD 185
Query: 266 LEFEAHVADFGIAKFLK--PDSSNWTEFAGT-YGYVAPELAYTMKITEKCDVYSFGVLAL 322
V+DFG+++ L+ PD++ T + APE + DV+SFGV+
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 323 EVIK-GKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVF 375
EV+ G+ P RD +SS+ + RLPAP ++ +++
Sbjct: 246 EVLAYGERPYWNMTNRDVISSVEEGY-------------RLPAPMGCPH----ALHQLML 288
Query: 376 SCLNESPESRPTM-KIVS 392
C ++ RP +IVS
Sbjct: 289 DCWHKDRAQRPRFSQIVS 306
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRAE----LPS--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
D ++ +G G G V+ AE LP +VA+K S +++F E E
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA----RQDFQREAEL 67
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE------------LG 226
LT ++H++IV+ +G C+ R +V+E+++ G + LG
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
Q + V VA + YL F VHRD++++N L+ + DFG+++ + S+
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--ST 182
Query: 287 NWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSF 341
++ G ++ PE K T + DV+SFGV+ E+ GK P LS+ +
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-- 240
Query: 342 LNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ + E+ PR P + ++ C P+ R ++K V +LQ
Sbjct: 241 IDCITQGRELERPRACPP---------EVYAIMRGCWQREPQQRHSIKDVHARLQ 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 32/281 (11%)
Query: 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
+D++ Q IG+G V A P + VAIK+ + L Q E L E++A+++
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQ-TSMDELLKEIQAMSQCH 66
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE-----LGWSQRMNVIKGVA 238
H NIV Y +LV + L G E L S +++ V
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-----SSNWTEFAG 293
+ L YLH + +HRD+ + N+LL + +ADFG++ FL + F G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 294 TYGYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML 352
T ++APE+ ++ + K D++SFG+ A+E+ G P + L
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------ 237
Query: 353 DPRLPAPSRSVQEKL------RSIVEVVFSCLNESPESRPT 387
DP P+ VQ+K +S +++ CL + PE RPT
Sbjct: 238 DP--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G+VY A ++ +GQ VAI++ + Q K+ + E+ + E ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
++V E+L G + Q V + AL +LH +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLHSN---Q 137
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
++HR+I S N+LL ++ + DFG + P+ S + GT ++APE+ K
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 312 CDVYSFGVLALEVIKGKHPR-----------------------DFLSSISSSFLNTDIEL 348
D++S G++A+E+I+G+ P + LS+I FLN +E+
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 257
Query: 349 D 349
D
Sbjct: 258 D 258
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 32/281 (11%)
Query: 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
+D++ Q IG+G V A P + VAIK+ + L Q E L E++A+++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQ-TSMDELLKEIQAMSQCH 71
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE-----LGWSQRMNVIKGVA 238
H NIV Y +LV + L G E L S +++ V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-----SSNWTEFAG 293
+ L YLH + +HRD+ + N+LL + +ADFG++ FL + F G
Sbjct: 132 EGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 294 TYGYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML 352
T ++APE+ ++ + K D++SFG+ A+E+ G P + L
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------ 242
Query: 353 DPRLPAPSRSVQEKL------RSIVEVVFSCLNESPESRPT 387
DP P+ VQ+K +S +++ CL + PE RPT
Sbjct: 243 DP--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 29/278 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
D ++ +G G G VY + VA+K + ++ +EFL E + EI+
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL-----KEDTMEVEEFLKEAAVMKEIK 65
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H N+V+L G C+ +++ EF+ G QE+ + + ++ A+ Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAP 300
L F +HRD++++N L+ VADFG+++ + D+ T AG + AP
Sbjct: 125 LEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAP 179
Query: 301 E-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
E LAY K + K DV++FGVL E+ G P I S + +E D ++
Sbjct: 180 ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVYELLEKDYRMERPEGC 235
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
P + + E++ +C +P RP+ + Q +
Sbjct: 236 PEK--------VYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 26/260 (10%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G V++ + + QVVAIK D+I D ++ E+ L++ + K Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSSYVTKYY 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G +++ E+L G + Q ++K + L YLH +
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDE----FQIATMLKEILKGLDYLHSE---K 140
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
+HRDI + N+LL + + +ADFG+A L F GT ++APE+ K
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA--PSRSVQEKLRS 369
D++S G+ A+E+ KG+ P + + FL +P P V + +S
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDMHPMRVLFL-------------IPKNNPPTLVGDFTKS 247
Query: 370 IVEVVFSCLNESPESRPTMK 389
E + +CLN+ P RPT K
Sbjct: 248 FKEFIDACLNKDPSFRPTAK 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
+ + + +G G G V +A+ + VAIK+ S ++K F+ E+ L+ + H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNH 61
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
NIVKLYG C + LV E+ + G + M+ + ++YL
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
H ++HRD+ NLLL + DFG A ++ ++ T G+ ++APE+
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVF 176
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
+EKCDV+S+G++ EVI + P D I + P L +
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTRPPL------I 227
Query: 364 QEKLRSIVEVVFSCLNESPESRPTMK 389
+ + I ++ C ++ P RP+M+
Sbjct: 228 KNLPKPIESLMTRCWSKDPSQRPSME 253
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 35/272 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+GNG G V+ VAIK + + FL E + + +++H +V+LY
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-----GTMSPESFLEEAQIMKKLKHDKLVQLYA 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L +++ VA ++Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERMNY--- 126
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ S N+L+ +ADFG+A+ ++ + + A + APE A + T K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 312 CDVYSFGVLALEVI-KGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364
DV+SFG+L E++ KG+ P R+ L + + R+P P Q
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-------------RMPCP----Q 229
Query: 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ E++ C + PE RPT + + L+
Sbjct: 230 DCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
+ + + +G G G V +A+ + VAIK+ S ++K F+ E+ L+ + H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNH 60
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
NIVKLYG C + LV E+ + G + M+ + ++YL
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
H ++HRD+ NLLL + DFG A ++ ++ T G+ ++APE+
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVF 175
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
+EKCDV+S+G++ EVI + P D I + P L +
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTRPPL------I 226
Query: 364 QEKLRSIVEVVFSCLNESPESRPTMK 389
+ + I ++ C ++ P RP+M+
Sbjct: 227 KNLPKPIESLMTRCWSKDPSQRPSME 252
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + +IRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 240
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 241 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+++ N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 240
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 241 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
VHRD+ + N+L+ VADFG+A+ ++ + + A + APE A + T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 312 CDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364
DV+SFG+L E+ KG+ P R+ L + + R+P P +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPECPE 242
Query: 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
S+ +++ C + PE RPT + + L+
Sbjct: 243 ----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 240
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 241 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKF-HSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL 190
IG+G G+VY A ++ + +VVAIKK +S S++ ++ + EV L ++RH N ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--KWQDIIKEVRFLQKLRHPNTIQY 119
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH-HDCF 249
G ++LV E+ QE+ + V G L+YLH H+
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV---EIAAVTHGALQGLAYLHSHN-- 174
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM--- 306
++HRD+ + N+LL + DFG A + P + F GT ++APE+ M
Sbjct: 175 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEG 228
Query: 307 KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
+ K DV+S G+ +E+ + K P ++++S+ + + + P L + S E
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-----HIAQNESPALQSGHWS--EY 281
Query: 367 LRSIVEVVFSCLNESPESRPTMKIV 391
R+ V+ SCL + P+ RPT +++
Sbjct: 282 FRNFVD---SCLQKIPQDRPTSEVL 303
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 70 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 124
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 183 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 229
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 230 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 126
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 231
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 232 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVMEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 240
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 241 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 74 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 128
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 233
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 234 PE----SLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 240
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 241 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVCEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 240
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 241 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKF-HSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL 190
IG+G G+VY A ++ + +VVAIKK +S S++ ++ + EV L ++RH N ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--KWQDIIKEVRFLQKLRHPNTIQY 80
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH-HDCF 249
G ++LV E+ QE+ + V G L+YLH H+
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV---EIAAVTHGALQGLAYLHSHN-- 135
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM--- 306
++HRD+ + N+LL + DFG A + P + F GT ++APE+ M
Sbjct: 136 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEG 189
Query: 307 KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
+ K DV+S G+ +E+ + K P ++++S+ + + + P L + S E
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-----HIAQNESPALQSGHWS--EY 242
Query: 367 LRSIVEVVFSCLNESPESRPTMKIV 391
R+ V+ SCL + P+ RPT +++
Sbjct: 243 FRNFVD---SCLQKIPQDRPTSEVL 264
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 240
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 241 PE----SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 330 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 384
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
VHRD+ + N+L+ VADFG+A+ ++ + E+ G + APE A
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAKFPIKWTAPEAALYG 439
Query: 307 KITEKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ T K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCP 486
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E S+ +++ C + PE RPT + + L+
Sbjct: 487 P----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK S + FL E + + ++RH +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQVMKKLRHEKLVQLYA 246
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
VHRD+ + N+L+ VADFG+A+ ++ + E+ G + APE A
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAKFPIKWTAPEAALYG 356
Query: 307 KITEKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ T K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCP 403
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E S+ +++ C + PE RPT + + L+
Sbjct: 404 P----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY--- 132
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAPELAYTMKIT 309
VHRD+ + N+L+ VADFG+A+ + + + +T G + APE A + T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 310 EKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPEC 237
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ S+ +++ C + PE RPT + + L+
Sbjct: 238 PE----SLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK S + FL E + + ++RH +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQVMKKLRHEKLVQLYA 246
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
VHRD+ + N+L+ VADFG+A+ ++ + E+ G + APE A
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAKFPIKWTAPEAALYG 356
Query: 307 KITEKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ T K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCP 403
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E S+ +++ C + PE RPT + + L+
Sbjct: 404 P----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK S + FL E + + ++RH +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQVMKKLRHEKLVQLYA 246
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 247 VVSE-EPIYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
VHRD+ + N+L+ VADFG+A+ ++ + E+ G + APE A
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAKFPIKWTAPEAALYG 356
Query: 307 KITEKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ T K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCP 403
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E S+ +++ C + PE RPT + + L+
Sbjct: 404 P----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 35/272 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK + + FL E + + ++RH +V+LY
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S +V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 71 VVSE-EPIXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
VHRD+ + N+L+ VADFG+A+ ++ + + A + APE A + T K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 312 CDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364
DV+SFG+L E+ KG+ P R+ L + + R+P P +
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCPPECPE 232
Query: 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
S+ +++ C + PE RPT + + L+
Sbjct: 233 ----SLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 45/277 (16%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VAIK P + + + FL E + + ++RH +V+LY
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGN--MSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
S ++V E++ +G + L Q +++ +A ++Y+ +
Sbjct: 248 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 302
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 306
VHRD+ + N+L+ VADFG+ + ++ + E+ G + APE A
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDN-----EYTARQGAKFPIKWTAPEAALYG 357
Query: 307 KITEKCDVYSFGVLALEV-IKGKHP------RDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ T K DV+SFG+L E+ KG+ P R+ L + + R+P P
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-------------RMPCP 404
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E S+ +++ C + PE RPT + + L+
Sbjct: 405 P----ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 28/296 (9%)
Query: 109 LNFEGKLVYDEIVRATNDFDAQYCIG---NGGHGSVYRAELPSGQVVAIKKFHSPLPSDQ 165
L F+ Y+ + R N D IG +G G VY+A+ V+A K ++
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 166 IVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQEL 225
+ D ++ E++ L H NIVKL + + +++ EF G + L
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPL 132
Query: 226 GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285
SQ V K DAL+YLH + I+HRD+ + N+L L+ + +ADFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 286 SNWTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHPRDFLSSISSS 340
F GT ++APE+ + K DV+S G+ +E+ + + P L+
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP---- 245
Query: 341 FLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ +++ + P L PSR + + + CL ++ ++R T SQ LQ
Sbjct: 246 -MRVLLKIAKSEPPTLAQPSRWSS----NFKDFLKKCLEKNVDARWT---TSQLLQ 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 28/296 (9%)
Query: 109 LNFEGKLVYDEIVRATNDFDAQYCIG---NGGHGSVYRAELPSGQVVAIKKFHSPLPSDQ 165
L F+ Y+ + R N D IG +G G VY+A+ V+A K ++
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 166 IVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQEL 225
+ D ++ E++ L H NIVKL + + +++ EF G + L
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPL 132
Query: 226 GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285
SQ V K DAL+YLH + I+HRD+ + N+L L+ + +ADFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 286 SNWTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHPRDFLSSISSS 340
F GT ++APE+ + K DV+S G+ +E+ + + P L+
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP---- 245
Query: 341 FLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ +++ + P L PSR + + + CL ++ ++R T SQ LQ
Sbjct: 246 -MRVLLKIAKSEPPTLAQPSRWSS----NFKDFLKKCLEKNVDARWT---TSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 28/296 (9%)
Query: 109 LNFEGKLVYDEIVRATNDFDAQYCIG---NGGHGSVYRAELPSGQVVAIKKFHSPLPSDQ 165
L F+ Y+ + R N D IG +G G VY+A+ V+A K ++
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 166 IVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQEL 225
+ D ++ E++ L H NIVKL + + +++ EF G + L
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPL 132
Query: 226 GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285
SQ V K DAL+YLH + I+HRD+ + N+L L+ + +ADFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 286 SNWTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHPRDFLSSISSS 340
F GT ++APE+ + K DV+S G+ +E+ + + P L+
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP---- 245
Query: 341 FLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ +++ + P L PSR + + + CL ++ ++R T SQ LQ
Sbjct: 246 -MRVLLKIAKSEPPTLAQPSRWSS----NFKDFLKKCLEKNVDARWT---TSQLLQ 293
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 27/287 (9%)
Query: 117 YDEIVRATNDFDAQYCIGN-GGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTE 175
Y+ + R N D IG G G VY+A+ V+A K +++ D ++ E
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVE 57
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
++ L H NIVKL + + +++ EF G + L SQ V K
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPLTESQIQVVCK 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI-AKFLKPDSSNWTEFAGT 294
DAL+YLH + I+HRD+ + N+L L+ + +ADFG+ AK + F GT
Sbjct: 116 QTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 295 YGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
++APE+ + K DV+S G+ +E+ + + P L+ + +++
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-----MRVLLKIA 227
Query: 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P L PSR + + + CL ++ ++R T SQ LQ
Sbjct: 228 KSEPPTLAQPSRWSS----NFKDFLKKCLEKNVDARWT---TSQLLQ 267
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+A+ L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
F VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 168 F---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 22/258 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 91
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G +++ E+L G L +Q +++ + L YLH +
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---K 144
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
+HRDI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
D++S G+ A+E+ +G+ P L + FL + P + + L+ V
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFL--------IPKNNPPTLEGNYSKPLKEFV 256
Query: 372 EVVFSCLNESPESRPTMK 389
E +CLN+ P RPT K
Sbjct: 257 E---ACLNKEPSFRPTAK 271
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 127 FDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRH 184
D+ IG G G V A E SG+ VA+K L Q ++E L EV + + +H
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD--LRKQQ---RRELLFNEVVIMRDYQH 101
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
N+V++Y +++ EFL+ G +E Q V + V AL+YL
Sbjct: 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----QIATVCEAVLQALAYL 157
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
H ++HRDI S ++LL L+ ++DFG + D GT ++APE+
Sbjct: 158 HAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS 214
Query: 305 TMKITEKCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E++ G+ P
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 24/261 (9%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G+G G VY+A+ +A K +++ D ++ E+E L H IVKL G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 75
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
H +++ EF G + L Q V + + +AL++LH I
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RI 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGI-AKFLKPDSSNWTEFAGTYGYVAPELAY--TMKIT 309
+HRD+ + N+L+ LE + +ADFG+ AK LK F GT ++APE+ TMK T
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDT 189
Query: 310 E---KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
K D++S G+ +E+ + + P L+ + +++ + P L PS+ E
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSDPPTLLTPSKWSVE- 243
Query: 367 LRSIVEVVFSCLNESPESRPT 387
R +++ L+++PE+RP+
Sbjct: 244 FRDFLKI---ALDKNPETRPS 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 41/285 (14%)
Query: 133 IGNGGHGSVYRAEL----PSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G V+ AE P +VA+K SD +K+F E E LT ++H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNA--RKDFHREAELLTNLQHEH 76
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXX----------XXXXXXXXXXQELGWSQRMNVIKG 236
IVK YG C +V+E++K G EL SQ +++ +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG--- 293
+A + YL F VHRD++++N L+ + DFG+++ + S+++ G
Sbjct: 137 IAAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTM 191
Query: 294 -TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEM 351
++ PE K T + DV+S GV+ E+ GK P LS+ N IE +
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIEC--I 243
Query: 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
R+ R+ ++ + E++ C P R +K + LQ
Sbjct: 244 TQGRVLQRPRTCPQE---VYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 22/258 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 86
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G +++ E+L G L +Q +++ + L YLH +
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---K 139
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
+HRDI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
D++S G+ A+E+ +G+ P L + FL + P + + L+ V
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFL--------IPKNNPPTLEGNYSKPLKEFV 251
Query: 372 EVVFSCLNESPESRPTMK 389
E +CLN+ P RPT K
Sbjct: 252 E---ACLNKEPSFRPTAK 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 114/277 (41%), Gaps = 41/277 (14%)
Query: 133 IGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G V+ L + +VA+K LP D K +FL E L + H NIV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G C+ + ++V E ++ G L + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG-----------YVAP 300
+HRD++++N L+ + ++DFG+++ E G Y + AP
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVYAASGGLRQVPVKWTAP 284
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359
E + + + DV+SFG+L E G P LS+ + E E RLP P
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR------EFVEK-GGRLPCP 337
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ ++ C P RP+ + Q+LQ
Sbjct: 338 ELCPD----AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 22/258 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 71
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G +++ E+L G + +Q +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHSE---K 124
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
+HRDI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
D++S G+ A+E+ +G+ P L + FL + P + + L+ V
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFL--------IPKNNPPTLEGNYSKPLKEFV 236
Query: 372 EVVFSCLNESPESRPTMK 389
E +CLN+ P RPT K
Sbjct: 237 E---ACLNKEPSFRPTAK 251
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++ + Q +G G G V + +GQ A+K S Q DK+ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 83
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NI+KLY F + +LV E G E+ ++ +I+ V ++
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 140
Query: 243 YLHHDCFPPIVHRDISSKNLLLD---LEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y+H + IVHRD+ +NLLL+ + + DFG++ + S + GT Y+A
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 196
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + EKCDV+S GV+ ++ G P
Sbjct: 197 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 24/261 (9%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G+G G VY+A+ +A K +++ D ++ E+E L H IVKL G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 83
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
H +++ EF G + L Q V + + +AL++LH I
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RI 138
Query: 253 VHRDISSKNLLLDLEFEAHVADFGI-AKFLKPDSSNWTEFAGTYGYVAPE--LAYTMKIT 309
+HRD+ + N+L+ LE + +ADFG+ AK LK F GT ++APE + TMK T
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDT 197
Query: 310 E---KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
K D++S G+ +E+ + + P L+ + +++ + P L PS+ E
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSDPPTLLTPSKWSVE- 251
Query: 367 LRSIVEVVFSCLNESPESRPT 387
R +++ L+++PE+RP+
Sbjct: 252 FRDFLKI---ALDKNPETRPS 269
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 97
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 156 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 260
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 261 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 290
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++ + Q +G G G V + +GQ A+K S Q DK+ L EV+ L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 107
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NI+KLY F + +LV E G E+ ++ +I+ V ++
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 164
Query: 243 YLHHDCFPPIVHRDISSKNLLLD---LEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y+H + IVHRD+ +NLLL+ + + DFG++ + S + GT Y+A
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 220
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + EKCDV+S GV+ ++ G P
Sbjct: 221 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 22/258 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G V++ + + +VVAIK D+I D ++ E+ L++ + K Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTKYY 71
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G +++ E+L G + +Q +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHSE---K 124
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
+HRDI + N+LL E +ADFG+A L F GT ++APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
D++S G+ A+E+ +G+ P L + FL + P + + L+ V
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFL--------IPKNNPPTLEGNYSKPLKEFV 236
Query: 372 EVVFSCLNESPESRPTMK 389
E +CLN+ P RPT K
Sbjct: 237 E---ACLNKEPSFRPTAK 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 80
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 243
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 244 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++ + Q +G G G V + +GQ A+K S Q DK+ L EV+ L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 106
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NI+KLY F + +LV E G E+ ++ +I+ V ++
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 163
Query: 243 YLHHDCFPPIVHRDISSKNLLLD---LEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y+H + IVHRD+ +NLLL+ + + DFG++ + S + GT Y+A
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 219
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + EKCDV+S GV+ ++ G P
Sbjct: 220 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 23/262 (8%)
Query: 133 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
LYG +V E G LG R V VA+ + YL F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTM 306
+HRD++++NLLL + DFG+ + L + ++ + + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ D + FGV E+ G+ P ++ S L+ + E RLP P Q+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 247
Query: 366 KLRSIVEVVFSCLNESPESRPT 387
I V+ C PE RPT
Sbjct: 248 ----IYNVMVQCWAHKPEDRPT 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 23/262 (8%)
Query: 133 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
LYG +V E G LG R V VA+ + YL F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTM 306
+HRD++++NLLL + DFG+ + L + ++ + + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ D + FGV E+ G+ P ++ S L+ + E RLP P Q+
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 253
Query: 366 KLRSIVEVVFSCLNESPESRPT 387
I V+ C PE RPT
Sbjct: 254 ----IYNVMVQCWAHKPEDRPT 271
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 23/262 (8%)
Query: 133 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
LYG +V E G LG R V VA+ + YL F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTM 306
+HRD++++NLLL + DFG+ + L + ++ + + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ D + FGV E+ G+ P ++ S L+ + E RLP P Q+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 247
Query: 366 KLRSIVEVVFSCLNESPESRPT 387
I V+ C PE RPT
Sbjct: 248 ----IYNVMVQCWAHKPEDRPT 265
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++ + Q +G G G V + +GQ A+K S Q DK+ L EV+ L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 89
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NI+KLY F + +LV E G E+ ++ +I+ V ++
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 146
Query: 243 YLHHDCFPPIVHRDISSKNLLLD---LEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y+H + IVHRD+ +NLLL+ + + DFG++ + S + GT Y+A
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 202
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + EKCDV+S GV+ ++ G P
Sbjct: 203 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 23/262 (8%)
Query: 133 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
LYG +V E G LG R V VA+ + YL F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTM 306
+HRD++++NLLL + DFG+ + L + ++ + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ D + FGV E+ G+ P ++ S L+ + E RLP P Q+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 243
Query: 366 KLRSIVEVVFSCLNESPESRPT 387
I V+ C PE RPT
Sbjct: 244 ----IYNVMVQCWAHKPEDRPT 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 23/262 (8%)
Query: 133 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
LYG +V E G LG R V VA+ + YL F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTM 306
+HRD++++NLLL + DFG+ + L + ++ + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ D + FGV E+ G+ P ++ S L+ + E RLP P Q+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 243
Query: 366 KLRSIVEVVFSCLNESPESRPT 387
I V+ C PE RPT
Sbjct: 244 ----IYNVMVQCWAHKPEDRPT 261
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G VY+ + + +VVAIK D+I D ++ E+ L++ I + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYITRYF 83
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G + +++ E+L G + + +++ + L YLH +
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEE----TYIATILREILKGLDYLHSER--- 136
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
+HRDI + N+LL + + +ADFG+A L F GT ++APE+ K
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
D++S G+ A+E+ KG+ P L + FL P+ P+ Q +
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLI----------PKNSPPTLEGQHS-KPFK 245
Query: 372 EVVFSCLNESPESRPTMK 389
E V +CLN+ P RPT K
Sbjct: 246 EFVEACLNKDPRFRPTAK 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 107
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 165
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 166 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 222
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 223 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 270
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 271 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 300
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E+++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+ + L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 14/245 (5%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKK-FHSPLPSDQIVDKKEFLTEVEALTEI 182
+DF+ +G G G+VY A E S +VA+K F S + + + + + E+E +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGV--EHQLRREIEIQAHL 80
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NI++LY + R +L+ E+ RG E + +++ +ADAL
Sbjct: 81 HHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADALM 137
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H ++HRDI +NLLL L+ E +ADFG + + S GT Y+ PE+
Sbjct: 138 YCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEM 192
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
EK D++ GVL E++ G P F S+ + +++D +P ++
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPP--FESASHNETYRRIVKVDLKFPASVPTGAQD 250
Query: 363 VQEKL 367
+ KL
Sbjct: 251 LISKL 255
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
D++ Y IG G +G + S G+++ K+ ++ +K+ ++EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKH 64
Query: 185 RNIVKLYGFCSHARHS--FLVYEFLKRGXXXXXXXX-XXXXQELGWSQRMNVIKGVADAL 241
NIV+ Y ++ ++V E+ + G Q L + V+ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 242 SYLHH--DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
H D ++HRD+ N+ LD + + DFG+A+ L D EF GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 300 PELAYTMKITEKCDVYSFGVLALEV 324
PE M EK D++S G L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
D++ Y IG G +G + S G+++ K+ ++ +K+ ++EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKH 64
Query: 185 RNIVKLYGFCSHARHS--FLVYEFLKRGXXXXXXXX-XXXXQELGWSQRMNVIKGVADAL 241
NIV+ Y ++ ++V E+ + G Q L + V+ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 242 SYLHH--DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
H D ++HRD+ N+ LD + + DFG+A+ L D+S F GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 300 PELAYTMKITEKCDVYSFGVLALEV 324
PE M EK D++S G L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
D++ Y IG G +G + S G+++ K+ ++ +K+ ++EV L E++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKH 64
Query: 185 RNIVKLYGFCSHARHS--FLVYEFLKRGXXXXXXXX-XXXXQELGWSQRMNVIKGVADAL 241
NIV+ Y ++ ++V E+ + G Q L + V+ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 242 SYLHH--DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
H D ++HRD+ N+ LD + + DFG+A+ L D+S F GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 300 PELAYTMKITEKCDVYSFGVLALEV 324
PE M EK D++S G L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 29/271 (10%)
Query: 133 IGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G V+ L + +VA+K LP D K +FL E L + H NIV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G C+ + ++V E ++ G L + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-----TYGYVAPELAYTM 306
+HRD++++N L+ + ++DFG++ + ++ +G + APE
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMS---REEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ + + DV+SFG+L E G P LS+ + E E RLP P
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR------EFVEK-GGRLPCPELCPD- 342
Query: 366 KLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ ++ C P RP+ + Q+LQ
Sbjct: 343 ---AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRHRNIVKL 190
IG G G V A + SG++VA+KK L Q ++E L EV + + +H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQ---RRELLFNEVVIMRDYQHENVVEM 93
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y ++V EFL+ G +E Q V V ALS LH
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG-- 147
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
++HRDI S ++LL + ++DFG + + GT ++APEL +
Sbjct: 148 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 311 KCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E++ G+ P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRHRNIVKL 190
IG G G V A + SG++VA+KK L Q ++E L EV + + +H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQ---RRELLFNEVVIMRDYQHENVVEM 91
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y ++V EFL+ G +E Q V V ALS LH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG-- 145
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
++HRDI S ++LL + ++DFG + + GT ++APEL +
Sbjct: 146 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 311 KCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E++ G+ P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRHRNIVKL 190
IG G G V A + SG++VA+KK L Q ++E L EV + + +H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQ---RRELLFNEVVIMRDYQHENVVEM 82
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y ++V EFL+ G +E Q V V ALS LH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG-- 136
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
++HRDI S ++LL + ++DFG + + GT ++APEL +
Sbjct: 137 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 311 KCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E++ G+ P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 80
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E ++ G + Q + +++G+A + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 243
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 244 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 39/268 (14%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
IG G G V R +LP + VAIK Q +++FL E + + H NI+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 86
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L G + ++ +V E+++ G + Q + +++G++ + YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG--QFTVIQLVGMLRGISAGMKYLSDMG 144
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGTYG--YVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + APE
Sbjct: 145 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHP------RDFLSSISSSFLNTDIELDEMLDPRLPA 358
K T DV+S+G++ EV+ G+ P +D + ++ + RLP+
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGY-------------RLPS 248
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRP 386
P + ++ +++ C + SRP
Sbjct: 249 P----MDCPAALYQLMLDCWQKERNSRP 272
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 23/262 (8%)
Query: 133 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
LYG +V E G LG R V VA+ + YL F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTM 306
+HRD++++NLLL + DFG+ + L + + + + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ D + FGV E+ G+ P ++ S L+ + E RLP P Q+
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 253
Query: 366 KLRSIVEVVFSCLNESPESRPT 387
I V+ C PE RPT
Sbjct: 254 ----IYNVMVQCWAHKPEDRPT 271
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 23/262 (8%)
Query: 133 IGNGGHGSVYRAEL--PSGQVVAIK-KFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G G V R E PSG+ V++ K P Q +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
LYG +V E G LG R V VA+ + YL F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTM 306
+HRD++++NLLL + DFG+ + L + + + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 307 KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ D + FGV E+ G+ P ++ S L+ + E RLP P Q+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD 243
Query: 366 KLRSIVEVVFSCLNESPESRPT 387
I V+ C PE RPT
Sbjct: 244 ----IYNVMVQCWAHKPEDRPT 261
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 39/268 (14%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
IG G G V R +LP + VAIK Q +++FL E + + H N+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ---RRDFLCEASIMGQFDHPNVV 107
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L G + + +V EF++ G + Q + +++G+A + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--QFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ ++ D + +T G + APE
Sbjct: 166 Y---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHP------RDFLSSISSSFLNTDIELDEMLDPRLPA 358
K T DV+S+G++ EV+ G+ P +D + +I + RLPA
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY-------------RLPA 269
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRP 386
P + + +++ C + RP
Sbjct: 270 P----MDCPAGLHQLMLDCWQKERAERP 293
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRHRNIVKL 190
IG G G V A + SG++VA+KK L Q ++E L EV + + +H N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQ---RRELLFNEVVIMRDYQHENVVEM 136
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y ++V EFL+ G +E Q V V ALS LH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG-- 190
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
++HRDI S ++LL + ++DFG + + GT ++APEL +
Sbjct: 191 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 311 KCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E++ G+ P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRHRNIVKL 190
IG G G V A + SG++VA+KK L Q ++E L EV + + +H N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQ---RRELLFNEVVIMRDYQHENVVEM 213
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y ++V EFL+ G +E Q V V ALS LH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG-- 267
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
++HRDI S ++LL + ++DFG + + GT ++APEL +
Sbjct: 268 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 311 KCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E++ G+ P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRHRNIVKL 190
IG G G V A + SG++VA+KK L Q ++E L EV + + +H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQ---RRELLFNEVVIMRDYQHENVVEM 86
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y ++V EFL+ G +E Q V V ALS LH
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG-- 140
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
++HRDI S ++LL + ++DFG + + GT ++APEL +
Sbjct: 141 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 311 KCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E++ G+ P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E ++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 126 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFL---------TE 175
DF +G G VYRAE + +G VAIK ++DKK E
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIK----------MIDKKAMYKAGMVQRVQNE 61
Query: 176 VEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK 235
V+ +++H +I++LY + + + +LV E G + ++ + +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMH 119
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK-PDSSNWTEFAGT 294
+ + YLH I+HRD++ NLLL +ADFG+A LK P ++T GT
Sbjct: 120 QIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGT 175
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 332
Y++PE+A + DV+S G + ++ G+ P D
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
D ++ +G G +G VY + VA+K + ++ +EFL E + EI+
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL-----KEDTMEVEEFLKEAAVMKEIK 86
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H N+V+L G C+ ++V E++ G +E+ + + ++ A+ Y
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYG-NLLDYLRECNREEVTAVVLLYMATQISSAMEY 145
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT---YGYVAP 300
L F +HRD++++N L+ VADFG+++ + D+ +T AG + AP
Sbjct: 146 LEKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAP 200
Query: 301 E-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
E LAY + K DV++FGVL E+ G P I S + +E ++
Sbjct: 201 ESLAYN-TFSIKSDVWAFGVLLWEIATYGMSP---YPGIDLSQVYDLLEKGYRMEQPEGC 256
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
P + + E++ +C SP RP+ Q +
Sbjct: 257 PPK--------VYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G +G VY+A+ G+ A+KK + I + E+ L E++H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQEL-GWSQRMNVIKGVADALSYLHHDCFPP 251
+ LV+E L + + + S + ++ G+A Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR---R 120
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
++HRD+ +NLL++ E E +ADFG+A+ +T T Y AP+ L + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 311 KCDVYSFGVLALEVIKG 327
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G +G VY+A+ G+ A+KK + I + E+ L E++H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQEL-GWSQRMNVIKGVADALSYLHHDCFPP 251
+ LV+E L + + + S + ++ G+A Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR---R 120
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
++HRD+ +NLL++ E E +ADFG+A+ +T T Y AP+ L + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 311 KCDVYSFGVLALEVIKG 327
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++ + Q +G G G V + +GQ A+K S Q DK+ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 83
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NI KLY F + +LV E G E+ ++ +I+ V ++
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 140
Query: 243 YLHHDCFPPIVHRDISSKNLLLD---LEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y H + IVHRD+ +NLLL+ + + DFG++ + S + GT Y+A
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIA 196
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + EKCDV+S GV+ ++ G P
Sbjct: 197 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRHRNIVKL 190
IG G G V A E +G+ VA+KK L Q ++E L EV + + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMD--LRKQQ---RRELLFNEVVIMRDYHHDNVVDM 107
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y ++V EFL+ G +E Q V V ALSYLH+
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQG-- 161
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
++HRDI S ++LL + ++DFG + + GT ++APE+ +
Sbjct: 162 -VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 311 KCDVYSFGVLALEVIKGKHP 330
+ D++S G++ +E+I G+ P
Sbjct: 221 EVDIWSLGIMVIEMIDGEPP 240
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNIVK 189
C+G G +G V+R G+ VA+K F S D+K + E E + RH NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILG 95
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+RHS + L + ++ +A L++LH + F
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 250 -----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-----GTYGYVA 299
P I HRD+ SKN+L+ + +AD G+A + S+N + GT Y+A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 300 PE-LAYTMKIT-----EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT---DIELDE 350
PE L T+++ ++ D+++FG++ EV + + F + D ++
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 274
Query: 351 M-----LDPRLP-APSRSVQE-KLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
M +D + P P+R + L S+ +++ C ++P +R T + + L
Sbjct: 275 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 326
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G +G VY+A+ G+ A+KK + I + E+ L E++H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQEL-GWSQRMNVIKGVADALSYLHHDCFPP 251
+ LV+E L + + + S + ++ G+A Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR---R 120
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
++HRD+ +NLL++ E E +ADFG+A+ +T T Y AP+ L + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 311 KCDVYSFGVLALEVIKG 327
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 32/271 (11%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G G V R +LPS + VAIK Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+L G + ++ +V E ++ G + Q + +++G+A + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD-- 165
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
VHRD++++N+L++ V+DFG+++ L+ D + +T G + +PE
Sbjct: 166 -MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI--ELDEMLDPRLPAPSRS 362
K T DV+S+G++ EV+ G+ P +S N D+ +DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------NQDVIKAVDEGY--RLPPP--- 272
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTM-KIVS 392
+ ++ +++ C + +RP +IVS
Sbjct: 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G +G VY+A+ G++VA+K+ + I + E+ L E+ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
R LV+EF+++ Q+ SQ + + +++ H I
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQD---SQIKIYLYQLLRGVAHCHQH---RI 140
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITEK 311
+HRD+ +NLL++ + +ADFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 312 CDVYSFGVLALEVIKGK 328
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNIVK 189
C+G G +G V+R G+ VA+K F S D+K + E E + RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILG 66
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+RHS + L + ++ +A L++LH + F
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 250 -----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-----GTYGYVA 299
P I HRD+ SKN+L+ + +AD G+A + S+N + GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 300 PE-LAYTMKIT-----EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT---DIELDE 350
PE L T+++ ++ D+++FG++ EV + + F + D ++
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245
Query: 351 M-----LDPRLP-APSRSVQE-KLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
M +D + P P+R + L S+ +++ C ++P +R T + + L
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G +G VY+A+ G++VA+K+ + I + E+ L E+ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
R LV+EF+++ Q+ SQ + + +++ H I
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQD---SQIKIYLYQLLRGVAHCHQH---RI 140
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITEK 311
+HRD+ +NLL++ + +ADFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 312 CDVYSFGVLALEVIKGK 328
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G GG +VY AE + VAIK P P ++ K F EV +++ H+NIV +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIP-PREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+LV E+++ L +N + D + + H
Sbjct: 78 DVDEEDDCYYLVMEYIE---GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD---MR 131
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-GTYGYVAPELAYTMKITE 310
IVHRDI +N+L+D + DFGIAK L S T GT Y +PE A E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 311 KCDVYSFGVLALEVIKGKHPRDFLSSIS 338
D+YS G++ E++ G+ P + +++S
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGETAVS 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNIVK 189
C+G G +G V+R G+ VA+K F S D+K + E E + RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILG 66
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+RHS + L + ++ +A L++LH + F
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 250 -----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-----GTYGYVA 299
P I HRD+ SKN+L+ + +AD G+A + S+N + GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 300 PE-LAYTMKIT-----EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT---DIELDE 350
PE L T+++ ++ D+++FG++ EV + + F + D ++
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245
Query: 351 M-----LDPRLP-APSRSVQE-KLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
M +D + P P+R + L S+ +++ C ++P +R T + + L
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 133 IGNGGHGSVYRAELPSG------QVVAIKKFHSPLPSD--QIVDK--KEFLTEVEALTEI 182
+G+G +G V + +G +V+ +F SD + ++K +E E+ L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NI+KL+ ++ +LV EF + G E + N++K + +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA---NIMKQILSGIC 160
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLE---FEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH IVHRDI +N+LL+ + + DFG++ F D + GT Y+A
Sbjct: 161 YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRLGTAYYIA 216
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ K EKCDV+S GV+ ++ G P
Sbjct: 217 PEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G +G V + +G++VAIKKF D++V KK + E++ L ++RH N+V L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLES-DDDKMV-KKIAMREIKLLKQLRHENLVNLL 90
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH-HDCFP 250
C + +LV+EF+ L + + + + + + H H+
Sbjct: 91 EVCKKKKRWYLVFEFVDH---TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN--- 144
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-TMKIT 309
I+HRDI +N+L+ + DFG A+ L + + T Y APEL +K
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 310 EKCDVYSFGVLALEVIKGK 328
+ DV++ G L E+ G+
Sbjct: 204 KAVDVWAIGCLVTEMFMGE 222
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
IG G G V R ++P + VAIK + Q +++FL+E + + H NI+
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLSEASIMGQFDHPNII 78
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L G + + ++ E+++ G + Q + +++G+ + YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 136
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + APE
Sbjct: 137 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHP 330
K T DV+S+G++ EV+ G+ P
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
IG G G V R ++P + VAIK + Q +++FL+E + + H NI+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLSEASIMGQFDHPNII 72
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L G + + ++ E+++ G + Q + +++G+ + YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 130
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
+ VHRD++++N+L++ V+DFG+++ L+ D + +T G + APE
Sbjct: 131 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHP 330
K T DV+S+G++ EV+ G+ P
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 38/276 (13%)
Query: 127 FDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RH 184
F+ +GNG +G VY+ + +GQ+ AIK + D+ ++E E+ L + H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGDE---EEEIKQEINMLKKYSHH 80
Query: 185 RNIVKLYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
RNI YG +LV EF G L + + +
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREIL 139
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
LS+LH ++HRDI +N+LL E + DFG++ L F GT ++
Sbjct: 140 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 299 APELAYTMKITE-----KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD 353
APE+ + + K D++S G+ A+E+ +G P + + + FL
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---------- 246
Query: 354 PRLPAP---SRSVQEKLRSIVEVVFSCLNESPESRP 386
PR PAP S+ +K +S +E SCL ++ RP
Sbjct: 247 PRNPAPRLKSKKWSKKFQSFIE---SCLVKNHSQRP 279
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 171 EFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQR 230
+ L EV L + H NI+KLY F R+ +LV E K G E+ +
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV- 140
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD-LEFEA--HVADFGIAKFLKPDSSN 287
+IK V ++YLH IVHRD+ +NLLL+ E +A + DFG++ + +
Sbjct: 141 --IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKK 194
Query: 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 195 MKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 76
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ EFL G + + + + + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 134
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 252 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 283
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 133 IGNGGHGSVY--RAELPSGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
IG G G V R ++P + VAIK + Q +++FL+E + + H NI+
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLSEASIMGQFDHPNII 93
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L G + + ++ E+++ G + Q + +++G+ + YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSD-- 149
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-SSNWTEFAGT--YGYVAPELAYT 305
VHRD++++N+L++ V+DFG+++ L+ D + +T G + APE
Sbjct: 150 -MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHP 330
K T DV+S+G++ EV+ G+ P
Sbjct: 209 RKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 170
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 171 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 280
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 281 PD----PLYEVMLKCWHPKAEMRPS 301
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 151
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSS--NWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + K S N T ++A E
Sbjct: 152 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 261
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 262 PD----PLYEVMLKCWHPKAEMRPS 282
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 23/265 (8%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ A VA+K P V+ FL E + ++H +VKL+
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA--FLAEANVMKTLQHDKLVKLHA 77
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ EF+ +G ++ + ++ +A+ ++++ +
Sbjct: 78 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 132
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 312 CDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSI 370
DV+SFG+L +E++ G+ P +S N ++ R+P P +E +
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPEE----L 241
Query: 371 VEVVFSCLNESPESRPTMKIVSQQL 395
++ C PE RPT + + L
Sbjct: 242 YNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 23/265 (8%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ A VA+K P V+ FL E + ++H +VKL+
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA--FLAEANVMKTLQHDKLVKLHA 250
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ EF+ +G ++ + ++ +A+ ++++ +
Sbjct: 251 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 305
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 312 CDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSI 370
DV+SFG+L +E++ G+ P +S N ++ R+P P +E +
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPEE----L 414
Query: 371 VEVVFSCLNESPESRPTMKIVSQQL 395
++ C PE RPT + + L
Sbjct: 415 YNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 144
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 145 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 254
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 255 PD----PLYEVMLKCWHPKAEMRPS 275
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 171
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 172 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 281
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 282 PD----PLYEVMLKCWHPKAEMRPS 302
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 152
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 262
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 263 PD----PLYEVMLKCWHPKAEMRPS 283
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 149
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 150 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 259
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 260 PD----PLYEVMLKCWHPKAEMRPS 280
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 21/253 (8%)
Query: 127 FDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFL-TEVEALTEIRH 184
F+ + +G G V AE +G++ A+K +P + K+ + E+ L +I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVK----CIPKKALKGKESSIENEIAVLRKIKH 79
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
NIV L H +LV + + G E S +I+ V DA+ YL
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---TLIRQVLDAVYYL 136
Query: 245 HHDCFPPIVHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
H IVHRD+ +NLL D E + ++DFG++K ++ + GT GYVAPE
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPE 192
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ ++ D +S GV+A ++ G P + S + L + E D P
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFD---SPYWDDI 249
Query: 360 SRSVQEKLRSIVE 372
S S ++ +R+++E
Sbjct: 250 SDSAKDFIRNLME 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 91
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 149
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 266
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 267 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 298
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 151
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 152 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 261
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 262 PD----PLYEVMLKCWHPKAEMRPS 282
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 150
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 151 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 260
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 261 PD----PLYEVMLKCWHPKAEMRPS 281
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 152
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 262
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 263 PD----PLYEVMLKCWHPKAEMRPS 283
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 73
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 131
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF-------AGTYGYV 298
+ +HRD++++N+L++ E + DFG+ K L D EF +
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EFFKVKEPGESPIFWY 184
Query: 299 APELAYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEM 351
APE K + DV+SFGV+ E+ K K P +F+ I + I L E+
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 352 L--DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
L + RLP P E I ++ C N + RP+ +
Sbjct: 245 LKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 280
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 147
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS----SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + N T ++A E
Sbjct: 148 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 257
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 258 PD----PLYEVMLKCWHPKAEMRPS 278
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 91
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 149
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 266
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 267 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 298
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 80
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 138
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 139 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 255
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 256 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 287
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 104
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 162
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 163 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 280 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 311
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 79
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 137
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 138 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 254
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 255 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 286
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 73
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 131
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 249 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 280
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 76
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 134
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 252 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 71
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 129
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 130 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 246
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 247 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 278
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 77
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 135
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 136 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 252
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 253 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 284
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 78
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 136
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 137 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 253
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 254 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 285
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 72
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 130
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 131 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 247
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 248 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 279
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 73
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 131
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 249 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 280
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 76
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHA--ERIDHIKLLQYTSQICKGMEYLG 134
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HRD++++N+L++ E + DFG+ K L D + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 252 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 283
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 76 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 130
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 131 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 189 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 228
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 229 TPDEVVWPGVTSMPDYKPSFPKWARQ 254
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 76 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 130
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 131 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 189 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 228
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 229 TPDEVVWPGVTSMPDYKPSFPKWARQ 254
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPSDQIVDKKEFLTEVEALT 180
+ F+ +G G G V+ + SG Q+ A+K + ++ D+ E + L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA--TLKVRDRVRTKMERDILV 82
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E+ H IVKL Y F + + +L+ +FL+ G E + +A
Sbjct: 83 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELAL 138
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
AL +LH I++RD+ +N+LLD E + DFG++K F GT Y+A
Sbjct: 139 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ T+ D +SFGVL E++ G P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 32/276 (11%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G+VVA+KK ++F E+E L ++H NI
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSLQHDNI 74
Query: 188 VKLYGFCSHA--RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
VK G C A R+ L+ E+L G + + + + + + YL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG 132
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPEL 302
+ +HR+++++N+L++ E + DFG+ K L D + + APE
Sbjct: 133 TKRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 303 AYTMKITEKCDVYSFGVLALEVI----KGKH-PRDFLSSISSSFLNTDI--ELDEML--D 353
K + DV+SFGV+ E+ K K P +F+ I + I L E+L +
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 249
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P E I ++ C N + RP+ +
Sbjct: 250 GRLPRPDGCPDE----IYMIMTECWNNNVNQRPSFR 281
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 72
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 73 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 127
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 128 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 186 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 225
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 226 TPDEVVWPGVTSMPDYKPSFPKWARQ 251
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPSDQIVDKKEFLTEVEALT 180
+ F+ +G G G V+ + SG Q+ A+K + ++ D+ E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA--TLKVRDRVRTKMERDILV 81
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E+ H IVKL Y F + + +L+ +FL+ G E + +A
Sbjct: 82 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELAL 137
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
AL +LH I++RD+ +N+LLD E + DFG++K F GT Y+A
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ T+ D +SFGVL E++ G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 182 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 221
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 211
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDS-SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + + DS N T ++A E
Sbjct: 212 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 321
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 322 PD----PLYEVMLKCWHPKAEMRPS 342
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ +T T Y A
Sbjct: 120 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 215
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 216 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 182 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 221
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 181 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 220
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQ 246
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 182 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 221
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 181 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 220
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQ 246
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPSDQIVDKKEFLTEVEALT 180
+ F+ +G G G V+ + SG Q+ A+K + ++ D+ E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA--TLKVRDRVRTKMERDILV 81
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E+ H IVKL Y F + + +L+ +FL+ G E + +A
Sbjct: 82 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELAL 137
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
AL +LH I++RD+ +N+LLD E + DFG++K F GT Y+A
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ T+ D +SFGVL E++ G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 153
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDS-SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + + DS N T ++A E
Sbjct: 154 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 263
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 264 PD----PLYEVMLKCWHPKAEMRPS 284
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G LS+ H
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG----LSFCHSHR- 123
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 182 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 221
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 152
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDS-SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + + DS N T ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 262
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 263 PD----PLYEVMLKCWHPKAEMRPS 283
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V++ +GQ+VAIKKF D V KK L E+ L +++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLES--EDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQR---MNVIKGVA----DALSYL 244
R LV+E+ EL QR +++K + A+++
Sbjct: 69 EVFRRKRRLHLVFEYCDH----------TVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 245 H-HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
H H+C +HRD+ +N+L+ + DFG A+ L S + + T Y +PEL
Sbjct: 119 HKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL 174
Query: 304 Y-TMKITEKCDVYSFGVLALEVIKG 327
+ DV++ G + E++ G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 153
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDS-SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + + DS N T ++A E
Sbjct: 154 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 263
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 264 PD----PLYEVMLKCWHPKAEMRPS 284
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 152
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDS-SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + + DS N T ++A E
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 262
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 263 PD----PLYEVMLKCWHPKAEMRPS 283
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 150
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDS-SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + + DS N T ++A E
Sbjct: 151 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 260
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 261 PD----PLYEVMLKCWHPKAEMRPS 281
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 29/265 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPS-DQIVDKKE---FLTEVEALTEIRHRNIV 188
IG G G VY L KK H + S ++I D E FLTE + + H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 189 KLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
L G C + S +V ++K G + + VA + +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 157
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDS-SNWTEFAGTYGYVAPELA 303
F VHRD++++N +LD +F VADFG+A+ + + DS N T ++A E
Sbjct: 158 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 304 YTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
T K T K DV+SFGVL E++ +G P +++ DI + + RL P
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-------DITVYLLQGRRLLQPEYC 267
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ EV+ C + E RP+
Sbjct: 268 PD----PLYEVMLKCWHPKAEMRPS 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 39/269 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 87
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ S A +V ++ + E+ + +++ + A + YLH I
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---I 141
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------EFAGTYGYVAPELAYTM 306
+HRD+ S N+ L + + DFG+A + S W+ + +G+ ++APE+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 307 K---ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
+ + DVY+FG++ E++ G+ P S +N ++ EM+ +P S
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLS- 248
Query: 364 QEKLRS-----IVEVVFSCLNESPESRPT 387
K+RS + ++ CL + + RP+
Sbjct: 249 --KVRSNCPKRMKRLMAECLKKKRDERPS 275
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 32/265 (12%)
Query: 133 IGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G+G G V+ E S + I K S +P +QI E+E L + H NI+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE------AEIEVLKSLDHPNII 83
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXX-QELGWSQRMNVIKGVADALSYLHHD 247
K++ + ++V E + G + L ++K + +AL+Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAH----VADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
+VH+D+ +N+L + H + DFG+A+ K D + T AGT Y+APE+
Sbjct: 144 ---HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV- 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDI-ELDEMLDPRLPAPSRS 362
+ +T KCD++S GV+ ++ G P F T + E+ + + P +
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLP----------FTGTSLEEVQQKATYKEPNYAVE 247
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
+ V+++ L + PE RP+
Sbjct: 248 CRPLTPQAVDLLKQMLTKDPERRPS 272
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 34/263 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ + VA+K S Q FL E + ++H +V+LY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-----AFLEEANLMKTLQHDKLVRLYA 74
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ EF+ +G + L + ++ +A+ ++Y+ +
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 312 CDVYSFGVLALEVIK-------GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364
+V+SFG+L E++ G+ D +S++S + R+P
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY-------------RMPRMENCPD 237
Query: 365 EKLRSIVEVVFSCLNESPESRPT 387
E + +++ C E E RPT
Sbjct: 238 E----LYDIMKMCWKEKAEERPT 256
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 106/277 (38%), Gaps = 32/277 (11%)
Query: 126 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVD------KKEFLTEVEA 178
+F + IG G VYRA L G VA+KK QI D + + + E++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKV-------QIFDLMDAKARADCIKEIDL 85
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
L ++ H N++K Y +V E G + L V K
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL--IPERTVWKYFV 143
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
S L H ++HRDI N+ + + D G+ +F ++ GT Y+
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 203
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP----RDFLSSISSSFLNTDIELDEMLDP 354
+PE + K D++S G L E+ + P + L S+ D
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP------- 256
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIV 391
P PS E+LR +V + C+N PE RP + V
Sbjct: 257 --PLPSDHYSEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G GG G V R +G+ VAIK+ L +++ + E++ + ++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMKKLNHPNVVSAR 78
Query: 192 ----GFCSHARHSF--LVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
G A + L E+ + G L ++ ++ AL YLH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 246 HDCFPPIVHRDISSKNLLLD---LEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
+ I+HRD+ +N++L + D G AK L TEF GT Y+APEL
Sbjct: 139 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPEL 194
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHP 330
K T D +SFG LA E I G P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G GG G V R +G+ VAIK+ L +++ + E++ + ++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMKKLNHPNVVSAR 79
Query: 192 ----GFCSHARHSF--LVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
G A + L E+ + G L ++ ++ AL YLH
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 246 HDCFPPIVHRDISSKNLLLD---LEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
+ I+HRD+ +N++L + D G AK L TEF GT Y+APEL
Sbjct: 140 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPEL 195
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHP 330
K T D +SFG LA E I G P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ A VA+K P V+ FL E + ++H +VKL+
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA--FLAEANVMKTLQHDKLVKLHA 244
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ EF+ +G ++ + ++ +A+ ++++ +
Sbjct: 245 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 299
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKC 312
+HRD+ + N+L+ +ADFG+A+ WT APE T K
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTIKS 350
Query: 313 DVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L +E++ G+ P +S N ++ R+P P +E +
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPEE----LY 399
Query: 372 EVVFSCLNESPESRPTMKIVSQQL 395
++ C PE RPT + + L
Sbjct: 400 NIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 35/270 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G G V + G VA+K + + + FL E +T++RH N+V+L G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA------QAFLAEASVMTQLRHSNLVQLLG 253
Query: 193 FCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++V E++ +G LG + V +A+ YL + F
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF-- 310
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKIT 309
VHRD++++N+L+ + A V+DFG+ K ++ T+ G + APE K +
Sbjct: 311 -VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 310 EKCDVYSFGVLALEVI---KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
K DV+SFG+L E+ + +PR L + +E +D P
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGYKMDAPDGCPP------ 413
Query: 367 LRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ +V+ +C + +RPT + +QL+
Sbjct: 414 --AVYDVMKNCWHLDAATRPTFLQLREQLE 441
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 127 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPSDQIVDKKE--FLTEVEALTEIR 183
+D + +G G V AE Q +VAIK + + ++ KE E+ L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKEALEGKEGSMENEIAVLHKIK 74
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H NIV L H +L+ + + G E S+ +I V DA+ Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 244 LHHDCFPPIVHRDISSKNLL---LDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LH IVHRD+ +NLL LD + + ++DFG++K P S T GT GYVAP
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAP 187
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPA 358
E+ ++ D +S GV+A ++ G P + + + L + E D P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS---PYWDD 244
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPT 387
S S ++ +R ++E + PE R T
Sbjct: 245 ISDSAKDFIRHLME-------KDPEKRFT 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKF-HSPLPSDQIVDKKEFLT 174
YDE+++ ++ IG GG V A + +G++VAIK + L SD K T
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIK----T 57
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E+EAL +RH++I +LY A F+V E+ G E + V
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSE---EETRVVF 114
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS---NWTEF 291
+ + A++Y+H + HRD+ +NLL D + + DFG+ KP + +
Sbjct: 115 RQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQTC 169
Query: 292 AGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRD 332
G+ Y APEL + + DV+S G+L ++ G P D
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 39/269 (14%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 87
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 88 YSTKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---I 141
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------EFAGTYGYVAPELAYTM 306
+HRD+ S N+ L + + DFG+A + S W+ + +G+ ++APE+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 307 K---ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
+ + DVY+FG++ E++ G+ P S +N ++ EM+ +P S
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLS- 248
Query: 364 QEKLRS-----IVEVVFSCLNESPESRPT 387
K+RS + ++ CL + + RP+
Sbjct: 249 --KVRSNCPKRMKRLMAECLKKKRDERPS 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 127 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPSDQIVDKKE--FLTEVEALTEIR 183
+D + +G G V AE Q +VAIK + + ++ KE E+ L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKEALEGKEGSMENEIAVLHKIK 74
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H NIV L H +L+ + + G E S+ +I V DA+ Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 244 LHHDCFPPIVHRDISSKNLL---LDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LH IVHRD+ +NLL LD + + ++DFG++K P S T GT GYVAP
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAP 187
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPA 358
E+ ++ D +S GV+A ++ G P + + + L + E D P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS---PYWDD 244
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPT 387
S S ++ +R ++E + PE R T
Sbjct: 245 ISDSAKDFIRHLME-------KDPEKRFT 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 31/265 (11%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 75
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 76 YSTKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---I 129
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMK--- 307
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 308 ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM-----LDPRLPAPSRS 362
+ + DVY+FG++ E++ G+ P S +N ++ EM L P L +
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLSKVRSN 241
Query: 363 VQEKLRSIVEVVFSCLNESPESRPT 387
++++ ++ CL + + RP+
Sbjct: 242 CPKRMKRLMA---ECLKKKRDERPS 263
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 34/263 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ + VA+K S Q FL E + ++H +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-----FLEEANLMKTLQHDKLVRLYA 75
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E++ +G + L + ++ +A+ ++Y+ +
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 131
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 312 CDVYSFGVLALEVIK-------GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364
DV+SFG+L E++ G+ D ++++S + R+P
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGY-------------RMPRVENCPD 238
Query: 365 EKLRSIVEVVFSCLNESPESRPT 387
E + +++ C E E RPT
Sbjct: 239 E----LYDIMKMCWKEKAEERPT 257
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 127 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPSDQIVDKKE--FLTEVEALTEIR 183
+D + +G G V AE Q +VAIK + + ++ KE E+ L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKEALEGKEGSMENEIAVLHKIK 74
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H NIV L H +L+ + + G E S+ +I V DA+ Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 244 LHHDCFPPIVHRDISSKNLL---LDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LH IVHRD+ +NLL LD + + ++DFG++K P S T GT GYVAP
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAP 187
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPA 358
E+ ++ D +S GV+A ++ G P + + + L + E D P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS---PYWDD 244
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPT 387
S S ++ +R ++E + PE R T
Sbjct: 245 ISDSAKDFIRHLME-------KDPEKRFT 266
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 127 FDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPSDQIVDKKE--FLTEVEALTEIR 183
+D + +G G V AE Q +VAIK + + ++ KE E+ L +I+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-----AKKALEGKEGSMENEIAVLHKIK 74
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H NIV L H +L+ + + G E S+ +I V DA+ Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 244 LHHDCFPPIVHRDISSKNLL---LDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
LH IVHRD+ +NLL LD + + ++DFG++K P S T GT GYVAP
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAP 187
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPA 358
E+ ++ D +S GV+A ++ G P + + + L + E D P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS---PYWDD 244
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPT 387
S S ++ +R ++E + PE R T
Sbjct: 245 ISDSAKDFIRHLME-------KDPEKRFT 266
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 35/270 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G G V + G VA+K + + + FL E +T++RH N+V+L G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA------QAFLAEASVMTQLRHSNLVQLLG 66
Query: 193 FCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++V E++ +G LG + V +A+ YL + F
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF-- 123
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKIT 309
VHRD++++N+L+ + A V+DFG+ K ++ T+ G + APE K +
Sbjct: 124 -VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 310 EKCDVYSFGVLALEVI---KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
K DV+SFG+L E+ + +PR L + +E +D P
Sbjct: 178 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGYKMDAPDGCPP------ 226
Query: 367 LRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ EV+ +C + RP+ + +QL+
Sbjct: 227 --AVYEVMKNCWHLDAAMRPSFLQLREQLE 254
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 470
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 471 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 528 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 582
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ +E + +++ C E+RP V +L+
Sbjct: 583 TAMLEKGE----RMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 628
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFH---SPLPSDQIVDKKEFLTEVEALT 180
+DF+ +G G G V++ + PSG V+A K H P +QI+ E++ L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII------RELQVLH 62
Query: 181 EIRHRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E IV YG F S S + +++ + VIKG
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--- 119
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
L+YL I+HRD+ N+L++ E + DFG++ L + +N EF GT Y++
Sbjct: 120 -LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMS 174
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359
PE + + D++S G+ +E+ G++PR + + F D ++E P+LP+
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM----AIFELLDYIVNEP-PPKLPSA 229
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
S++ + + V CL ++P R +K
Sbjct: 230 VFSLEFQ-----DFVNKCLIKNPAERADLK 254
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 223
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 224 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 469
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 470 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 527 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 581
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ +E + +++ C E+RP V +L+
Sbjct: 582 TAMLEKGE----RMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 627
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 35/270 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G G V + G VA+K + + + FL E +T++RH N+V+L G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA------QAFLAEASVMTQLRHSNLVQLLG 81
Query: 193 FCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++V E++ +G LG + V +A+ YL + F
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF-- 138
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKIT 309
VHRD++++N+L+ + A V+DFG+ K ++ T+ G + APE K +
Sbjct: 139 -VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 310 EKCDVYSFGVLALEVI---KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
K DV+SFG+L E+ + +PR L + +E +D P
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGYKMDAPDGCPP------ 241
Query: 367 LRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ EV+ +C + RP+ + +QL+
Sbjct: 242 --AVYEVMKNCWHLDAAMRPSFLQLREQLE 269
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 217
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 218 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H NIVKL+ H+FLV E L G E ++ +++ + A+S+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSE---TEASYIMRKLVSAVSH 121
Query: 244 LHHDCFPPIVHRDISSKNLLLDLE---FEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
+H +VHRD+ +NLL E E + DFG A+ PD+ T Y AP
Sbjct: 122 MHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
EL E CD++S GV+ ++ G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 105
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 106 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 163 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 217
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 218 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 263
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 217
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 218 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 217
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 218 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 216
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 217 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 62
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 123 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 218
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 219 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 251
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 223
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 224 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ S A +V ++ + E+ + +++ + A + YLH I
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 311 K------CDVYSFGVLALEVIKGKHP 330
K DVY+FG++ E++ G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 91
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 92 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 145
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------EFAGTYGYVAPELAYTM 306
+HRD+ S N+ L + + DFG+A + S W+ + +G+ ++APE+ +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---I 198
Query: 307 KITEK------CDVYSFGVLALEVIKGKHP 330
++ +K DVY+FG++ E++ G+ P
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 216
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 217 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 124
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 125 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 183 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 222
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQ 248
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------EFAGTYGYVAPELAYTM 306
+HRD+ S N+ L + + DFG+A + S W+ + +G+ ++APE+ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---I 178
Query: 307 KITEK------CDVYSFGVLALEVIKGKHP 330
++ +K DVY+FG++ E++ G+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 99
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------EFAGTYGYVAPELAYTM 306
+HRD+ S N+ L + + DFG+A + S W+ + +G+ ++APE+ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---I 206
Query: 307 KITEK------CDVYSFGVLALEVIKGKHP 330
++ +K DVY+FG++ E++ G+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 107
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 165 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 219
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 220 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 265
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 120 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 215
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 216 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 214
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 215 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 125
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 126 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 183 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 237
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 238 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 283
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 214
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 215 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 181 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 220
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQ 246
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+ K ++ + + E+ L E+ H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 182 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 221
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 117
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 118 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 175 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 229
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 230 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 275
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+ K ++ + + E+ L E+ H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 181 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 220
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQ 246
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 181 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 220
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQ 246
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 214
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 215 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 85 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 139
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 200 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 249
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 250 QLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 76
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 187
Query: 311 K------CDVYSFGVLALEVIKGKHP 330
K DVY+FG++ E++ G+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+EFL + L S +++G+A S+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 123
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ + T Y APE+ K
Sbjct: 124 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 182 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 221
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 311 K------CDVYSFGVLALEVIKGKHP 330
K DVY+FG++ E++ G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E ++++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKLNHQN 109
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 224
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 282
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 283 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 216
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 217 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 116 VYDEIVRATND-FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLT 174
V+DE D F+ IG G G V + + + K+ + + + +
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E++ + + H +V L+ F+V + L G +E + ++ +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE--TVKLFIC 122
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294
+ V AL YL + I+HRD+ N+LLD H+ DF IA L P + T AGT
Sbjct: 123 ELVM-ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGT 177
Query: 295 YGYVAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHPRDFLSSISS 339
Y+APE+ + K + D +S GV A E+++G+ P SS SS
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 76
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 187
Query: 311 K------CDVYSFGVLALEVIKGKHP 330
K DVY+FG++ E++ G+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 98
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 99 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 152
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 209
Query: 311 K------CDVYSFGVLALEVIKGKHP 330
K DVY+FG++ E++ G+ P
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 99
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 210
Query: 311 K------CDVYSFGVLALEVIKGKHP 330
K DVY+FG++ E++ G+ P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 120 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 215
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 216 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 191 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 240
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + VA+K + P+ Q + + F EV L + RH NI+ G
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQL--QAFKNEVGVLRKTRHVNILLFMG 73
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + + +V ++ + E+ + +++ + A + YLH I
Sbjct: 74 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 127
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIA--KFLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD+ S N+ L + + DFG+A K S + + +G+ ++APE+ +++ +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 184
Query: 311 K------CDVYSFGVLALEVIKGKHP 330
K DVY+FG++ E++ G+ P
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E ++++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKLNHQN 95
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 210
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 268
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 269 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 239
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 240 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
K E L E + ++ + IV++ G C A LV E + G ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+ ++ V+ + YL F VHRD++++N+LL + A ++DFG++K L+ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 289 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
A T+G + APE K + K DV+SFGVL E G+ P + S +
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEV 239
Query: 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+E E R+ P+ R + +++ C E+RP V +L+
Sbjct: 240 TAMLEKGE----RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 78 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 132
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 193 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 242
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 243 QLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 136
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 197 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 246
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 247 QLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 83
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 84 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 138
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 199 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 248
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 249 QLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 38/271 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
NDFD +G G G V E +G+ A+K L + I+ K E +TE L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMK----ILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-VA 238
RH + L Y F +H R F V E+ G E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL YLH +V+RDI +NL+LD + + DFG+ K D + F GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTD----IELDEMLDP 354
APE+ D + GV+ E++ G+ P F N D EL M +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHERLFELILMEEI 222
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
R P R++ + +S++ L + P+ R
Sbjct: 223 RFP---RTLSPEAKSLLA---GLLKKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 38/271 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
NDFD +G G G V E +G+ A+K L + I+ K E +TE L
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMK----ILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-VA 238
RH + L Y F +H R F V E+ G E +R +
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIV 118
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL YLH +V+RDI +NL+LD + + DFG+ K D + F GT Y+
Sbjct: 119 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 175
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTD----IELDEMLDP 354
APE+ D + GV+ E++ G+ P F N D EL M +
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHERLFELILMEEI 225
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
R P R++ + +S++ L + P+ R
Sbjct: 226 RFP---RTLSPEAKSLLA---GLLKKDPKQR 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 38/271 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
NDFD +G G G V E +G+ A+K L + I+ K E +TE L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMK----ILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-VA 238
RH + L Y F +H R F V E+ G E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL YLH +V+RDI +NL+LD + + DFG+ K D + F GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTD----IELDEMLDP 354
APE+ D + GV+ E++ G+ P F N D EL M +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHERLFELILMEEI 222
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
R P R++ + +S++ L + P+ R
Sbjct: 223 RFP---RTLSPEAKSLLA---GLLKKDPKQR 247
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 191 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 240
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 77 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 131
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 192 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 241
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 242 QLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 38/271 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
NDFD +G G G V E +G+ A+K L + I+ K E +TE L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMK----ILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-VA 238
RH + L Y F +H R F V E+ G E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL YLH +V+RDI +NL+LD + + DFG+ K D + F GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTD----IELDEMLDP 354
APE+ D + GV+ E++ G+ P F N D EL M +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHERLFELILMEEI 222
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
R P R++ + +S++ L + P+ R
Sbjct: 223 RFP---RTLSPEAKSLLA---GLLKKDPKQR 247
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
L EV L ++ H NI+KLY F R+ +LV E + G E+ +
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-- 108
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGIAKFLKPDSSNW 288
++K V +YLH IVHRD+ +NLLL+ + + DFG++ +
Sbjct: 109 -IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKM 163
Query: 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 164 KERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 217
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 218 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 94
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 155 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 209
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 267
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 268 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 38/271 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
NDFD +G G G V E +G+ A+K L + I+ K E +TE L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMK----ILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-VA 238
RH + L Y F +H R F V E+ G E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL YLH +V+RDI +NL+LD + + DFG+ K D + F GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTD----IELDEMLDP 354
APE+ D + GV+ E++ G+ P F N D EL M +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHERLFELILMEEI 222
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
R P R++ + +S++ L + P+ R
Sbjct: 223 RFP---RTLSPEAKSLLA---GLLKKDPKQR 247
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL + L S +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 119 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 214
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 215 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 247
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 217
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 218 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
L EV L ++ H NI+KLY F R+ +LV E + G E+ +
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-- 125
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGIAKFLKPDSSNW 288
++K V +YLH IVHRD+ +NLLL+ + + DFG++ +
Sbjct: 126 -IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKM 180
Query: 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 181 KERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL L S +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 121 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 216
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 217 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 249
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 86
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 147 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 201
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 259
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 260 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 86 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 140
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 201 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 250
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 251 QLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 102/249 (40%), Gaps = 35/249 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
NDFD +G G G V E +G+ A+K L + I+ K E +TE L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMK----ILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-VA 238
RH + L Y F +H R F V E+ G E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL YLH +V+RDI +NL+LD + + DFG+ K D + F GT Y+
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE-------LDEM 351
APE+ D + GV+ E++ G+ P F N D E ++E+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHERLFELILMEEI 222
Query: 352 LDPRLPAPS 360
PR +P
Sbjct: 223 RFPRTLSPE 231
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 109
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 224
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 282
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 283 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K S FL E + +++H+ +V+LY
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-----PDAFLAEANLMKQLQHQRLVRLYA 70
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 71 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 125
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 186 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 235
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 236 QLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 94
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 155 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 209
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 267
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 268 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
NDFD +G G G V E +G+ A+K L + I+ K E +TE L
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMK----ILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-VA 238
RH + L Y F +H R F V E+ G E +R +
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERARFYGAEIV 120
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL YLH +V+RDI +NL+LD + + DFG+ K D + F GT Y+
Sbjct: 121 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
APE+ D + GV+ E++ G+ P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 136
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 197 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 246
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 247 QLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 95
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 210
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 268
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 269 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 191 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 240
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+EFL L S +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 120 CHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 215
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 216 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 248
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
T+++ +G G V R ++P+GQ A K ++ S + D ++ E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
+H NIV+L+ S +LV++ + G E S + I+ + ++++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVN 117
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
+ H IVHRD+ +NLLL + + +ADFG+A ++ D W FAGT GY++
Sbjct: 118 HCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + D+++ GV+ ++ G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
T+++ +G G V R ++P+GQ A K ++ S + D ++ E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
+H NIV+L+ S +LV++ + G E S + I+ + ++++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVN 117
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
+ H IVHRD+ +NLLL + + +ADFG+A ++ D W FAGT GY++
Sbjct: 118 HCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + D+++ GV+ ++ G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 111
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 172 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 226
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 284
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 285 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 80
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 81 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 135
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 196 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 245
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 246 QLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFH---SPLPSDQIVDKKEFLTEVEALT 180
+DF+ +G G G V++ + PSG V+A K H P +QI+ E++ L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII------RELQVLH 78
Query: 181 EIRHRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E IV YG F S S + +++ + VIKG
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--- 135
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
L+YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++
Sbjct: 136 -LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMS 190
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359
PE + + D++S G+ +E+ G++P S + F D ++E P+LP+
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP-PPKLPSG 249
Query: 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
S++ + + V CL ++P R +K
Sbjct: 250 VFSLEFQ-----DFVNKCLIKNPAERADLK 274
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 101
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 162 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 216
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 274
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 275 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 135
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + + + G
Sbjct: 196 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLPV 250
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 308
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 309 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 112
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + + + G
Sbjct: 173 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLPV 227
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 285
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 286 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 35/270 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G G V + G VA+K + + + FL E +T++RH N+V+L G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA------QAFLAEASVMTQLRHSNLVQLLG 72
Query: 193 FCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++V E++ +G LG + V +A+ YL + F
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF-- 129
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKIT 309
VHRD++++N+L+ + A V+DFG+ K ++ T+ G + APE +
Sbjct: 130 -VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 310 EKCDVYSFGVLALEVI---KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
K DV+SFG+L E+ + +PR L + +E +D P
Sbjct: 184 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGYKMDAPDGCPP------ 232
Query: 367 LRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++ EV+ +C + RP+ + +QL+
Sbjct: 233 --AVYEVMKNCWHLDAAMRPSFLQLREQLE 260
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VYSEQ--DELDFLMEALIISKFNHQN 109
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 224
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 282
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 283 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 15/217 (6%)
Query: 119 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIV---DKKEFLT 174
+I DF+ +G G G V+ AE + Q AIK L D ++ D + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIK----ALKKDVVLMDDDVECTMV 67
Query: 175 EVEALT-EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNV 233
E L+ H + ++ + F V E+L G + S+
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFY 124
Query: 234 IKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG 293
+ L +LH IV+RD+ N+LLD + +ADFG+ K + EF G
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG 181
Query: 294 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
T Y+APE+ K D +SFGVL E++ G+ P
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 121
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 182 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLPV 236
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 294
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 295 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G+G G VY ++ PS VA+K + S+Q D+ +FL E +++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 95
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXX----XXXXXXXXQELGWSQRMNVIKGVADALS 242
IV+ G + F++ E + G L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVA---DFGIAKFLKPDSSNWTEFAGT----Y 295
YL + F +HRDI+++N LL VA DFG+A+ + +++ G
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RASYYRKGGCAMLPV 210
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP 354
++ PE T K D +SFGVL E+ G P + S + L M P
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPP 268
Query: 355 R-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P P + ++ C PE RP I+ ++++
Sbjct: 269 KNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VA++ I+DK ++ EV + +
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVR----------IIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +LV E+ G +E + + + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQ 127
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + + EF G+ Y APEL
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPEL 183
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 112/283 (39%), Gaps = 40/283 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
ND Q IG G G V +A + + AIK+ D D ++F E+E L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 71
Query: 182 IRHR-NIVKLYGFCSHARHSFLVYEFLKRGXXX-------------XXXXXXXXXQELGW 227
+ H NI+ L G C H + +L E+ G L
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
Q ++ VA + YL F +HRD++++N+L+ + A +ADFG+++ +
Sbjct: 132 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI 346
L Y++ T DV+S+GVL E++ G P + T
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTPYCGM---------TCA 238
Query: 347 ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT 387
EL E L RL P E + +++ C E P RP+
Sbjct: 239 ELYEKLPQGYRLEKPLNCDDE----VYDLMRQCWREKPYERPS 277
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 116/265 (43%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQ-----GSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HRD+ + N+L+ +ADFG+A+ ++ E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 191 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 240
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 35/263 (13%)
Query: 152 VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYE----- 205
VA+K S +D +K+ ++E++ ++ + +H NIV L G C+H ++ E
Sbjct: 79 VAVKMLKSTAHAD---EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 206 ----FLKR----GXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHRD 256
FL+R G ++L ++ VA +++L +C +HRD
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRD 191
Query: 257 ISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKITEKCDV 314
++++N+LL A + DFG+A+ + DS+ + ++APE + T + DV
Sbjct: 192 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 251
Query: 315 YSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEV 373
+S+G+L E+ G +P + ++S F + +M P AP ++I +
Sbjct: 252 WSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAF-AP--------KNIYSI 301
Query: 374 VFSCLNESPESRPTMKIVSQQLQ 396
+ +C P RPT + + LQ
Sbjct: 302 MQACWALEPTHRPTFQQICSFLQ 324
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 112/283 (39%), Gaps = 40/283 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
ND Q IG G G V +A + + AIK+ D D ++F E+E L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 81
Query: 182 IRHR-NIVKLYGFCSHARHSFLVYEFLKRGXXX-------------XXXXXXXXXQELGW 227
+ H NI+ L G C H + +L E+ G L
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
Q ++ VA + YL F +HRD++++N+L+ + A +ADFG+++ +
Sbjct: 142 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI 346
L Y++ T DV+S+GVL E++ G P + T
Sbjct: 199 TMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGM---------TCA 248
Query: 347 ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT 387
EL E L RL P E + +++ C E P RP+
Sbjct: 249 ELYEKLPQGYRLEKPLNCDDE----VYDLMRQCWREKPYERPS 287
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 14/263 (5%)
Query: 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
DFD IG G + V L + ++ A+K L +D D TE +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQASN 68
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H +V L+ F V E++ G E ++ AL+Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNY 125
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK-FLKPDSSNWTEFAGTYGYVAPEL 302
LH I++RD+ N+LLD E + D+G+ K L+P + + F GT Y+APE+
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEI 181
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
D ++ GVL E++ G+ P D + S + NT+ L +++ + RS
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241
Query: 363 VQEKLRSIVEVVFSCLNESPESR 385
+ K S+++ S LN+ P+ R
Sbjct: 242 LSVKAASVLK---SFLNKDPKER 261
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 14/263 (5%)
Query: 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
DFD IG G + V L + ++ A+K L +D D TE +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQASN 64
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H +V L+ F V E++ G E ++ AL+Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNY 121
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK-FLKPDSSNWTEFAGTYGYVAPEL 302
LH I++RD+ N+LLD E + D+G+ K L+P + + F GT Y+APE+
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEI 177
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
D ++ GVL E++ G+ P D + S + NT+ L +++ + RS
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 237
Query: 363 VQEKLRSIVEVVFSCLNESPESR 385
+ K S+++ S LN+ P+ R
Sbjct: 238 LSVKAASVLK---SFLNKDPKER 257
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 14/263 (5%)
Query: 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
DFD IG G + V L + ++ A+K L +D D TE +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQASN 79
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H +V L+ F V E++ G E ++ AL+Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNY 136
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK-FLKPDSSNWTEFAGTYGYVAPEL 302
LH I++RD+ N+LLD E + D+G+ K L+P + + F GT Y+APE+
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEI 192
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
D ++ GVL E++ G+ P D + S + NT+ L +++ + RS
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 252
Query: 363 VQEKLRSIVEVVFSCLNESPESR 385
+ K S+++ S LN+ P+ R
Sbjct: 253 MSVKAASVLK---SFLNKDPKER 272
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 27/217 (12%)
Query: 126 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEV 176
++ Q IG G V A + +G+ VA+K I+DK ++ EV
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVK----------IIDKTQLNPTSLQKLFREV 65
Query: 177 EALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG 236
+ + H NIVKL+ + +LV E+ G +E + +
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQ 122
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG 296
+ A+ Y H IVHRD+ ++NLLLD + +ADFG + + F G+
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPP 178
Query: 297 YVAPELAYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
Y APEL K + DV+S GV+ ++ G P D
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G VY+A +G+VVA+KK ++ + + E+ L E+ H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVADALSYLHHDCF 249
+LV+E + + L S +++G+A S+
Sbjct: 68 DVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR----- 122
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-I 308
++HRD+ +NLL++ E +ADFG+A+ +T T Y APE+ K
Sbjct: 123 --VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368
+ D++S G + E++ + + D E+D++ + L
Sbjct: 181 STAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF---------RIFRTLG 220
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394
+ EVV+ + P+ +P+ ++Q
Sbjct: 221 TPDEVVWPGVTSMPDYKPSFPKWARQ 246
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 152 VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYE----- 205
VA+K S +D+ K+ ++E++ ++ + +H NIV L G C+H ++ E
Sbjct: 71 VAVKMLKSTAHADE---KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 206 ----FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHRDISSK 260
FL+R EL ++ VA +++L +C +HRD++++
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLEL--RDLLHFSSQVAQGMAFLASKNC----IHRDVAAR 181
Query: 261 NLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKITEKCDVYSFG 318
N+LL A + DFG+A+ + DS+ + ++APE + T + DV+S+G
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 319 VLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSC 377
+L E+ G +P + ++S F + +M P AP ++I ++ +C
Sbjct: 242 ILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAF-AP--------KNIYSIMQAC 291
Query: 378 LNESPESRPTMKIVSQQLQ 396
P RPT + + LQ
Sbjct: 292 WALEPTHRPTFQQICSFLQ 310
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 16/264 (6%)
Query: 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
DFD IG G + V L + ++ A++ L +D D TE +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDIDWVQTEKHVFEQASN 111
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
H +V L+ F V E++ G ++L ++ AL+Y
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNY 168
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK-FLKPDSSNWTEFAGTYGYVAPEL 302
LH I++RD+ N+LLD E + D+G+ K L+P + T F GT Y+APE+
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAPEI 224
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT-DIELDEMLDPRLPAPSR 361
D ++ GVL E++ G+ P D + S + NT D +L+ ++ P R
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP-R 283
Query: 362 SVQEKLRSIVEVVFSCLNESPESR 385
S+ K S+++ S LN+ P+ R
Sbjct: 284 SLSVKAASVLK---SFLNKDPKER 304
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + + F T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + + F T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 114 KLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF 172
++VY+ ++DF + +G G +G V A P+G++VAIKK P D+ +
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRT 56
Query: 173 LTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
L E++ L +H NI+ ++ ++ + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS------- 285
I A+ LH ++HRD+ NLL++ + V DFG+A+ + +
Sbjct: 117 FIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 286 ---SNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEV 324
S TE+ T Y APE+ T K + DV+S G + E+
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VAIK I+DK ++ EV + +
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIK----------IIDKTQLNPTSLQKLFREVRIMKIL 68
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +L+ E+ G +E + + + + A+
Sbjct: 69 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQ 125
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + F G+ Y APEL
Sbjct: 126 YCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPEL 181
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 182 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 33/265 (12%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG+G G+VY+ + V I K P P + F EV L + RH NI+ G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ----FQAFRNEVAVLRKTRHVNILLFMG 99
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ + + +V ++ + ++ Q +++ + A + YLH I
Sbjct: 100 YMTKDNLA-IVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---I 153
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------EFAGTYGYVAPELAYTM 306
+HRD+ S N+ L + DFG+A S W+ + G+ ++APE+
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 307 K---ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP--SR 361
+ + DVYS+G++ E++ G+ P S +N ++ M+ +P S+
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELP--------YSHINNRDQIIFMVGRGYASPDLSK 261
Query: 362 SVQEKLRSIVEVVFSCLNESPESRP 386
+ +++ +V C+ + E RP
Sbjct: 262 LYKNCPKAMKRLVADCVKKVKEERP 286
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 117/265 (44%), Gaps = 21/265 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+ VA+K + FL E + +++H+ +V+LY
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
+ +++ E+++ G + L ++ +++ +A+ ++++ +
Sbjct: 72 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY--- 126
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEK 311
+HR++ + N+L+ +ADFG+A+ ++ + E A + APE T K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 312 CDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371
DV+SFG+L E++ H R +++ + ++E R+ P +E +
Sbjct: 187 SDVWSFGILLTEIV--THGRIPYPGMTNPEVIQNLERGY----RMVRPDNCPEE----LY 236
Query: 372 EVVFSCLNESPESRPTMKIVSQQLQ 396
+++ C E PE RPT + L+
Sbjct: 237 QLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 29/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVE-ALTEI 182
+D + +G G +G V + +PSGQ++A+K+ + + S + +K L +++ ++ +
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE---QKRLLMDLDISMRTV 107
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
V YG ++ E + Q + + + AL
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
+LH ++HRD+ N+L++ + + DFGI+ +L DS T AG Y+APE
Sbjct: 168 HLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPER 224
Query: 303 --------AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354
Y++ K D++S G+ +E+ + P D S + F ++ E P
Sbjct: 225 INPELNQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLK-QVVEEPSP 276
Query: 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT 387
+LPA S + V+ CL ++ + RPT
Sbjct: 277 QLPADKFSAE-----FVDFTSQCLKKNSKERPT 304
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 33/214 (15%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VA+K I+DK ++ EV + +
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVK----------IIDKTQLNSSSLQKLFREVRIMKVL 63
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNV---IKGVAD 239
H NIVKL+ + +LV E+ G GW + + +
Sbjct: 64 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH------GWMKEKEARAKFRQIVS 117
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
A+ Y H IVHRD+ ++NLLLD + +ADFG + + F G+ Y A
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAA 173
Query: 300 PELAYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
PEL K + DV+S GV+ ++ G P D
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 152 VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYE----- 205
VA+K S +D+ K+ ++E++ ++ + +H NIV L G C+H ++ E
Sbjct: 79 VAVKMLKSTAHADE---KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 206 ----FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHRDISSK 260
FL+R EL ++ VA +++L +C +HRD++++
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLEL--RDLLHFSSQVAQGMAFLASKNC----IHRDVAAR 189
Query: 261 NLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKITEKCDVYSFG 318
N+LL A + DFG+A+ + DS+ + ++APE + T + DV+S+G
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 319 VLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSC 377
+L E+ G +P + ++S F + +M P AP ++I ++ +C
Sbjct: 250 ILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAF-AP--------KNIYSIMQAC 299
Query: 378 LNESPESRPTMKIVSQQLQ 396
P RPT + + LQ
Sbjct: 300 WALEPTHRPTFQQICSFLQ 318
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 84 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + + F T Y APE+ M
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWM 194
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 148 SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--ARHSFLVYE 205
+G+ VA+K + I D K+ E+E L + H NIVK G C+ L+ E
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
FL G ++ Q++ + + YL + VHRD++++N+L++
Sbjct: 106 FLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 160
Query: 266 LEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLAL 322
E + + DFG+ K ++ D T + + APE K DV+SFGV
Sbjct: 161 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 220
Query: 323 EVI 325
E++
Sbjct: 221 ELL 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 133 IGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G+G G+VY+ +P G+ V AIK + V EF+ E + + H ++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV---EFMDEALIMASMDHPHL 102
Query: 188 VKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
V+L G C LV + + G +G +N +A + YL
Sbjct: 103 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYT 305
+VHRD++++N+L+ + DFG+A+ L+ D + G ++A E +
Sbjct: 160 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP--RLPAPSRS 362
K T + DV+S+GV E++ G P D + + E+ ++L+ RLP P
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---------REIPDLLEKGERLPQPPIC 267
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMK 389
+ + V+ C +SRP K
Sbjct: 268 TID----VYMVMVKCWMIDADSRPKFK 290
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 133 IGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G+G G+VY+ +P G+ V AIK + V EF+ E + + H ++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV---EFMDEALIMASMDHPHL 79
Query: 188 VKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
V+L G C LV + + G +G +N +A + YL
Sbjct: 80 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYT 305
+VHRD++++N+L+ + DFG+A+ L+ D + G ++A E +
Sbjct: 137 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP--RLPAPSRS 362
K T + DV+S+GV E++ G P D + + E+ ++L+ RLP P
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---------REIPDLLEKGERLPQPPIC 244
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMK 389
+ + V+ C +SRP K
Sbjct: 245 TID----VYMVMVKCWMIDADSRPKFK 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VA+K I+DK ++ EV + +
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVK----------IIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +LV E+ G +E + + + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQ 127
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + + F G+ Y APEL
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPEL 183
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 33/261 (12%)
Query: 152 VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYE----- 205
VA+K S +D+ K+ ++E++ ++ + +H NIV L G C+H ++ E
Sbjct: 79 VAVKMLKSTAHADE---KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 206 ----FLKRGXXXXXXXXXXXXQELGWSQR--MNVIKGVADALSYL-HHDCFPPIVHRDIS 258
FL+R S R ++ VA +++L +C +HRD++
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVA 191
Query: 259 SKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKITEKCDVYS 316
++N+LL A + DFG+A+ + DS+ + ++APE + T + DV+S
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 251
Query: 317 FGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVF 375
+G+L E+ G +P + ++S F + +M P AP ++I ++
Sbjct: 252 YGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAF-AP--------KNIYSIMQ 301
Query: 376 SCLNESPESRPTMKIVSQQLQ 396
+C P RPT + + LQ
Sbjct: 302 ACWALEPTHRPTFQQICSFLQ 322
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VAIK I+DK ++ EV + +
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIK----------IIDKTQLNPTSLQKLFREVRIMKIL 71
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +L+ E+ G +E + + + + A+
Sbjct: 72 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQ 128
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + F G Y APEL
Sbjct: 129 YCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPEL 184
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VA+K I+DK ++ EV + +
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVK----------IIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +LV E+ G +E + + + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQ 127
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + + F G+ Y APEL
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPEL 183
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 108 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHY 220
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S +VY +++ Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 121 VRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKF-HSPLPSDQIVDKKEFLTEVEA 178
+R +DF+ +G G G V +A + AIKK H+ I L+EV
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVML 55
Query: 179 LTEIRHRNIVKLYGFCSHARH-------------SFLVYEFLKRGXXXXXXXXXXXXQEL 225
L + H+ +V+ Y R+ F+ E+ + G Q+
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 226 GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK------ 279
R+ + + +ALSY+H I+HRD+ N+ +D + DFG+AK
Sbjct: 116 DEYWRL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 280 -FLKPDSS-------NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVI 325
LK DS N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 148 SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--ARHSFLVYE 205
+G+ VA+K + I D K+ E+E L + H NIVK G C+ L+ E
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 93
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
FL G ++ Q++ + + YL + VHRD++++N+L++
Sbjct: 94 FLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 148
Query: 266 LEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLAL 322
E + + DFG+ K ++ D T + + APE K DV+SFGV
Sbjct: 149 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 208
Query: 323 EVI 325
E++
Sbjct: 209 ELL 211
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVE- 177
+ DF +G G G V+ +G+ A+K V KKE L +VE
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMK-----------VLKKEIVVRLKQVEH 52
Query: 178 ------ALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
L+ + H I++++G A+ F++ ++++ G L SQR
Sbjct: 53 TNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL---------LRKSQRF 103
Query: 232 N--VIKGVAD----ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285
V K A AL YLH I++RD+ +N+LLD + DFG AK++ PD
Sbjct: 104 PNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDV 159
Query: 286 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ GT Y+APE+ T + D +SFG+L E++ G P
Sbjct: 160 T--YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 98 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 153
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHY 210
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 211 NQTVDIWSVGCIMAELLTGR 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 33/261 (12%)
Query: 152 VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYE----- 205
VA+K S +D+ K+ ++E++ ++ + +H NIV L G C+H ++ E
Sbjct: 79 VAVKMLKSTAHADE---KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 206 ----FLKRGXXXXXXXXXXXXQELGWSQR--MNVIKGVADALSYL-HHDCFPPIVHRDIS 258
FL+R S R ++ VA +++L +C +HRD++
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVA 191
Query: 259 SKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKITEKCDVYS 316
++N+LL A + DFG+A+ + DS+ + ++APE + T + DV+S
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 251
Query: 317 FGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVF 375
+G+L E+ G +P + ++S F + +M P AP ++I ++
Sbjct: 252 YGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAF-AP--------KNIYSIMQ 301
Query: 376 SCLNESPESRPTMKIVSQQLQ 396
+C P RPT + + LQ
Sbjct: 302 ACWALEPTHRPTFQQICSFLQ 322
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 107 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 162
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHY 219
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 93 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 203
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 112/283 (39%), Gaps = 40/283 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
ND Q IG G G V +A + + AIK+ D D ++F E+E L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 78
Query: 182 IRHR-NIVKLYGFCSHARHSFLVYEFLKRGXXX-------------XXXXXXXXXQELGW 227
+ H NI+ L G C H + +L E+ G L
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
Q ++ VA + YL F +HR+++++N+L+ + A +ADFG+++ +
Sbjct: 139 QQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI 346
L Y++ T DV+S+GVL E++ G P + T
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTPYCGM---------TCA 245
Query: 347 ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT 387
EL E L RL P E + +++ C E P RP+
Sbjct: 246 ELYEKLPQGYRLEKPLNCDDE----VYDLMRQCWREKPYERPS 284
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 95 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TADEMTGYVATRWYRAPEIMLNWM 205
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTE 290
+ VI AL++ H + I+HRD+ N+++ V DFGIA+ + ++ T+
Sbjct: 136 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 291 FA---GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347
A GT Y++PE A + + DVYS G + EV+ G+ P S +S ++ + +
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 252
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVE-VVFSCLNESPESR 385
P P + E L + ++ VV L ++PE+R
Sbjct: 253 ---------PIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 114 KLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF 172
++VY+ ++DF + +G G +G V A P+G++VAIKK P D+ +
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRT 56
Query: 173 LTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
L E++ L +H NI+ ++ ++ + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS------- 285
I A+ LH ++HRD+ NLL++ + V DFG+A+ + +
Sbjct: 117 FIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 286 ---SNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEV 324
S EF T Y APE+ T K + DV+S G + E+
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 84 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHY 196
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTE 290
+ VI AL++ H + I+HRD+ N+++ V DFGIA+ + ++ T+
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 291 FA---GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347
A GT Y++PE A + + DVYS G + EV+ G+ P S +S ++ + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVE-VVFSCLNESPESR 385
P P + E L + ++ VV L ++PE+R
Sbjct: 236 ---------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 94 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHY 206
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTE 290
+ VI AL++ H + I+HRD+ N+++ V DFGIA+ + ++ T+
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 291 FA---GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347
A GT Y++PE A + + DVYS G + EV+ G+ P S +S ++ + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVE-VVFSCLNESPESR 385
P P + E L + ++ VV L ++PE+R
Sbjct: 236 ---------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTE 290
+ VI AL++ H + I+HRD+ N+++ V DFGIA+ + ++ T+
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 291 FA---GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347
A GT Y++PE A + + DVYS G + EV+ G+ P S +S ++ + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVE-VVFSCLNESPESR 385
P P + E L + ++ VV L ++PE+R
Sbjct: 236 ---------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 14/246 (5%)
Query: 127 FDAQYCIGNGGHGSVYRAE----LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
F+ +G GG+G V++ +G++ A+K + D E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 183 RHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADAL 241
+H IV L Y F + + +L+ E+L G E + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMAL 134
Query: 242 SYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
+LH I++RD+ +N++L+ + + DFG+ K D + F GT Y+APE
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361
+ D +S G L +++ G P F ++ ++ L P L +R
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTGENRKKTIDKILKCKLNLPPYLTQEAR 249
Query: 362 SVQEKL 367
+ +KL
Sbjct: 250 DLLKKL 255
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 95 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TADEMTGYVATRWYRAPEIMLNWM 205
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 14/246 (5%)
Query: 127 FDAQYCIGNGGHGSVYRAE----LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
F+ +G GG+G V++ +G++ A+K + D E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 183 RHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADAL 241
+H IV L Y F + + +L+ E+L G E + ++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMAL 134
Query: 242 SYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
+LH I++RD+ +N++L+ + + DFG+ K D + F GT Y+APE
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361
+ D +S G L +++ G P F ++ ++ L P L +R
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTGENRKKTIDKILKCKLNLPPYLTQEAR 249
Query: 362 SVQEKL 367
+ +KL
Sbjct: 250 DLLKKL 255
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 29/274 (10%)
Query: 124 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVE-ALTE 181
+D + +G G +G V + +PSGQ++A+K+ + + S + +K L +++ ++
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE---QKRLLMDLDISMRT 62
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADAL 241
+ V YG ++ E + Q + + + AL
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 242 SYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
+LH ++HRD+ N+L++ + + DFGI+ +L D + + AG Y+APE
Sbjct: 123 EHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPE 179
Query: 302 L--------AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD 353
Y++ K D++S G+ +E+ + P D S + F ++ E
Sbjct: 180 RINPELNQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLK-QVVEEPS 231
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT 387
P+LPA S + V+ CL ++ + RPT
Sbjct: 232 PQLPADKFSAE-----FVDFTSQCLKKNSKERPT 260
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 95 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWM 205
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 47/298 (15%)
Query: 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNIVK 189
C+G G +G V+R L G+ VA+K F S D++ + E E + RH NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSR-------DEQSWFRETEIYNTVLLRHDNILG 66
Query: 190 LYGFCSHARHS----FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+R+S +L+ + + G L + + A L++LH
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLH 122
Query: 246 HDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-----GTY 295
+ F P I HRD S+N+L+ + +AD G+A + S++ + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTK 181
Query: 296 GYVAPELAYTMKITEKC-------DVYSFGVLALEVIKGKHPRDFLSSISSSFLNT---D 345
Y+APE+ +I C D+++FG++ E+ + + F + D
Sbjct: 182 RYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPND 240
Query: 346 IELDEM-----LDPRLPA-PSR-SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++M +D + P P+R + L + +++ C +P +R T + + LQ
Sbjct: 241 PSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQ 298
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VA+K I+DK ++ EV + +
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVK----------IIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +LV E+ G +E + + + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQ 127
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + + F G Y APEL
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPEL 183
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKF---HSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
+G G +VY+A + + Q+VAIKK H D I + L E++ L E+ H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQELSHPNII 75
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L H + LV++F++ L S + L YLH
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI 308
I+HRD+ NLLLD +ADFG+AK + + T Y APEL + ++
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 309 TE-KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351
D+++ G + E++ + FL D +LD++
Sbjct: 190 YGVGVDMWAVGCILAELL-----------LRVPFLPGDSDLDQL 222
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 100 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 210
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 108/256 (42%), Gaps = 37/256 (14%)
Query: 120 IVRAT-NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LT 174
+ R T N+F+ +G G G V E +G+ A+K L + IV K E LT
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLT 58
Query: 175 EVEALTEIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNV 233
E L RH + L Y F +H R F V E+ G +E +S+
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLS-----RERVFSEDRAR 112
Query: 234 IKG--VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
G + AL YLH + +V+RD+ +NL+LD + + DFG+ K D + F
Sbjct: 113 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 170
Query: 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE---- 347
GT Y+APE+ D + GV+ E++ G+ P F N D E
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHEKLFE 220
Query: 348 ---LDEMLDPRLPAPS 360
++E+ PR P
Sbjct: 221 LILMEEIRFPRTLGPE 236
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 127 FDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFH---SPLPSDQIVDKKEFLT-EVEALTE 181
+D + IG G V R +G A+K L +Q+ + +E E L +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 182 IR-HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H +I+ L + FLV++ +++G E + ++++ + +A
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEA 212
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
+S+LH + IVHRD+ +N+LLD + ++DFG + L+P E GT GY+AP
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGYLAP 268
Query: 301 E-LAYTMKIT-----EKCDVYSFGVLALEVIKGKHP 330
E L +M T ++ D+++ GV+ ++ G P
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 27/255 (10%)
Query: 148 SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL--VYE 205
+G++VA+K + K+ E++ L + H +I+K G C A + L V E
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
++ G +G +Q + + + + ++YLH + +HRD++++N+LLD
Sbjct: 116 YVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLD 168
Query: 266 LEFEAHVADFGIAKFLKPDSSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLAL 322
+ + DFG+AK + + + + APE K DV+SFGV
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 323 EVI-----KGKHPRDFLSSIS-SSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVV 374
E++ P FL I + T + L E+L+ RLP P + E + ++
Sbjct: 229 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE----VYHLM 284
Query: 375 FSCLNESPESRPTMK 389
+C RPT +
Sbjct: 285 KNCWETEASFRPTFE 299
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
T+++ IG G V R +L +G A K ++ S + D ++ E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
+H NIV+L+ S +LV++ + G E S + I+ + +A+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVL 117
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
+ H +VHRD+ +NLLL + + +ADFG+A ++ D W FAGT GY++
Sbjct: 118 HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + D+++ GV+ ++ G P
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-TM 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNAM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
N+F+ +G G G V E +G+ A+K L + IV K E LTE L
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG--V 237
RH + L Y F +H R F V E+ G +E +S+ G +
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLS-----RERVFSEDRARFYGAEI 117
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGY 297
AL YLH + +V+RD+ +NL+LD + + DFG+ K D + F GT Y
Sbjct: 118 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 175
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE-------LDE 350
+APE+ D + GV+ E++ G+ P F N D E ++E
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHEKLFELILMEE 225
Query: 351 MLDPRLPAPS 360
+ PR P
Sbjct: 226 IRFPRTLGPE 235
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 93 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 203
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 100 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 210
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 100 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 210
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 118/302 (39%), Gaps = 77/302 (25%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKK--EFLTEVEALTEIRHRNIVKL 190
+G G GSV L ++K + D ++ EFL+E + + H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 191 YGFCSHAR-------------------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
G C H++L+Y L+ G + + +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP-----------KHIPLQTLL 150
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
+ +A + YL + F +HRD++++N +L + VADFG++K + +
Sbjct: 151 KFMVDIALGMEYLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKI---------Y 198
Query: 292 AGTY-----------GYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLSSISS 339
+G Y ++A E T K DV++FGV E+ +G P
Sbjct: 199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY-------- 250
Query: 340 SFLNTDIELDEMLD-----PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
++ EM D RL P + E + E+++SC P RPT ++ Q
Sbjct: 251 ----PGVQNHEMYDYLLHGHRLKQPEDCLDE----LYEIMYSCWRTDPLDRPTFSVLRLQ 302
Query: 395 LQ 396
L+
Sbjct: 303 LE 304
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 99 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 209
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 90 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 200
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V + + + Q A+K + ++ D L EVE L ++ H NI+KL+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKKLDHPNIMKLF 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++V E G E ++ +IK V ++Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHK---HN 141
Query: 252 IVHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI 308
IVHRD+ +N+LL + + + + DFG++ + + + + GT Y+APE+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRGT-Y 199
Query: 309 TEKCDVYSFGVLALEVIKGKHP 330
EKCDV+S GV+ ++ G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + SG+ VAIKK P S +I K+ + E+ L ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAY-RELLLLKHMQHENVIGLL 107
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ A Y+F E + ++ + L Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG--- 164
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITE 310
+VHRD+ NL ++ + E + DFG+A+ + T + T Y APE+ + M +
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 311 KCDVYSFGVLALEVIKGK---HPRDFLSSIS 338
D++S G + E++ GK +D+L ++
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 108 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 218
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 95 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 205
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 93 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 203
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VA++ I+DK ++ EV + +
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVR----------IIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +LV E+ G +E + + + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQ 127
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + + F G+ Y APEL
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPEL 183
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 99 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 209
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 107 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 162
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 217
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 93 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 203
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 87 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 142
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 197
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 94 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 204
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 90 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 200
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 90 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHY 202
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 111 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 166
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVATRWYRAPEIMLNWM 221
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
N+F+ +G G G V E +G+ A+K L + IV K E LTE L
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG--V 237
RH + L Y F +H R F V E+ G +E +S+ G +
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLS-----RERVFSEDRARFYGAEI 257
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGY 297
AL YLH + +V+RD+ +NL+LD + + DFG+ K D + F GT Y
Sbjct: 258 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE-------LDE 350
+APE+ D + GV+ E++ G+ P F N D E ++E
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHEKLFELILMEE 365
Query: 351 MLDPRLPAPS 360
+ PR P
Sbjct: 366 IRFPRTLGPE 375
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
N+F+ +G G G V E +G+ A+K L + IV K E LTE L
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG--V 237
RH + L Y F +H R F V E+ G +E +S+ G +
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLS-----RERVFSEDRARFYGAEI 119
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGY 297
AL YLH + +V+RD+ +NL+LD + + DFG+ K D + F GT Y
Sbjct: 120 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 177
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE-------LDE 350
+APE+ D + GV+ E++ G+ P F N D E ++E
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHEKLFELILMEE 227
Query: 351 MLDPRLPAPS 360
+ PR P
Sbjct: 228 IRFPRTLGPE 237
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 86 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 141
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 196
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGR 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE 181
+ +F IG G +G VY+A +G+VVA+KK ++ + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW--SQRMNVIKGVAD 239
+ H NIVKL +LV+E + + L S +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
S+ ++HRD+ +NLL++ E +ADFG+A+ + T Y A
Sbjct: 122 CHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 300 PELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
PE+ K + D++S G + E++ + + D E+D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR-----------ALFPGDSEIDQLF------ 217
Query: 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ L + EVV+ + P+ +P+ ++Q
Sbjct: 218 ---RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 250
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 144
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 84 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 194
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 85 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 195
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTE 290
+ VI AL++ H + I+HRD+ N+++ V DFGIA+ + ++ T+
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 291 FA---GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347
A GT Y++PE A + + DVYS G + EV+ G+ P F S +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPDSVAYQHVR 233
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVE-VVFSCLNESPESR 385
D P P + E L + ++ VV L ++PE+R
Sbjct: 234 ED-------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEALT 180
N+F+ +G G G V E +G+ A+K L + IV K E LTE L
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 181 EIRHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG--V 237
RH + L Y F +H R F V E+ G +E +S+ G +
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLS-----RERVFSEDRARFYGAEI 260
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGY 297
AL YLH + +V+RD+ +NL+LD + + DFG+ K D + F GT Y
Sbjct: 261 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 318
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE-------LDE 350
+APE+ D + GV+ E++ G+ P F N D E ++E
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----------FYNQDHEKLFELILMEE 368
Query: 351 MLDPRLPAPS 360
+ PR P
Sbjct: 369 IRFPRTLGPE 378
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 90 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 200
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 85 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 195
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 127 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
F+ + +G G VYR + Q K ++ + VDKK TE+ L + H N
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQ-----KPYALKVLKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHH 246
I+KL LV E + G E + +K + +A++YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE---RDAADAVKQILEAVAYLHE 166
Query: 247 DCFPPIVHRDISSKNLLLDL---EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
+ IVHRD+ +NLL + +ADFG++K ++ T GT GY APE+
Sbjct: 167 NG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEIL 222
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
+ D++S G++ ++ G P
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 94 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 204
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 229
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKL 190
+G G +G V+++ + +G+VVA+KK + D + E+ LTE+ H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS--TDAQRTFREIMILTELSGHENIVNL 74
Query: 191 YGF--CSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+ R +LV+++++ L + V+ + + YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANI-----LEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAK--------------FLKPDSSNW------ 288
++HRD+ N+LL+ E VADFG+++ + ++ N+
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 289 -TEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVIKGK 328
T++ T Y APE+ + K T+ D++S G + E++ GK
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFH-SPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL 190
+G G G V E +G VA+K + + S +V K + E++ L RH +I+KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKL 76
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y S F+V E++ G +E+ + + + + A+ Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM-- 131
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKIT 309
+VHRD+ +N+LLD A +ADFG++ + D + G+ Y APE ++ +
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 310 EKCDVYSFGVLALEVIKGKHPRD 332
+ D++S GV+ ++ G P D
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFD 212
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 114 KLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEF 172
++VY+ ++DF + +G G +G V A P+G++VAIKK P D+ +
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRT 56
Query: 173 LTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
L E++ L +H NI+ ++ ++ + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS------- 285
I A+ LH ++HRD+ NLL++ + V DFG+A+ + +
Sbjct: 117 FIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 286 ---SNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEV 324
S TE T Y APE+ T K + DV+S G + E+
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 94 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+ M
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWMHY 206
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 144
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 207
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 207
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 95
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 152
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 213 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 144
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 89
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 146
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 36/211 (17%)
Query: 136 GGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVE--ALTEIRHRNIVKLYGF 193
G G V++A+L + + VA+K F I DK+ + E E +L ++H NI++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIF-------PIQDKQSWQNEYEVYSLPGMKHENILQFIG- 85
Query: 194 CSHARHS------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ R + +L+ F ++G + W++ ++ + +A L+YLH D
Sbjct: 86 -AEKRGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHED 140
Query: 248 C-------FPPIVHRDISSKNLLLDLEFEAHVADFGIA-KFLKPDSSNWTEF-AGTYGYV 298
P I HRDI SKN+LL A +ADFG+A KF S+ T GT Y+
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 299 APE-----LAYTMKITEKCDVYSFGVLALEV 324
APE + + + D+Y+ G++ E+
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 214
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK P + + L E++ L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 148
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 144
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 199
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 191 YGFCSHAR-----HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S + LV +++ Q L + + +L+Y+H
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 196
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 133 IGNGGHGSVYRA--ELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G G GSV + + Q+ VAIK + D +E + E + + ++ + IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
L G C A LV E G +E+ S ++ V+ + YL F
Sbjct: 75 LIGVC-QAEALMLVMEMA--GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT-EFAGTY--GYVAPELAYTM 306
VHRD++++N+LL A ++DFG++K L D S +T AG + + APE
Sbjct: 132 ---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 307 KITEKCDVYSFGVLALEVIK-GKHP 330
K + + DV+S+GV E + G+ P
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 203
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTE 290
+ VI AL++ H + I+HRD+ N+L+ V DFGIA+ + ++ +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 291 FA---GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347
A GT Y++PE A + + DVYS G + EV+ G+ P S +S ++ + +
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVE-VVFSCLNESPESR 385
P P + E L + ++ VV L ++PE+R
Sbjct: 236 ---------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 107
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 164
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 91
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 148
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 121 VRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+ +++ F +GNG + +VY+ +G VA+K+ L S++ + E+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK--LDSEEGTPSTA-IREISLM 57
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK---- 235
E++H NIV+LY LV+EF+ G +N++K
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG--LELNLVKYFQW 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY 295
+ L++ H + I+HRD+ +NLL++ + + DFG+A+ + ++ T
Sbjct: 116 QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 296 GYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGK 328
Y AP+ L + + D++S G + E+I GK
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 223
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLAFRHENIIGIN 89
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 146
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 233
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 85
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 142
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 231
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 229
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 274
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 208
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 191 YGFCSHARHSFLVY-----EFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S VY +++ Q L + + +L+Y+H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 200
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 92
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 149
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 85
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 142
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 93
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 150
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 211 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 84
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 141
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 202 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 91
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 148
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 25/267 (9%)
Query: 133 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN---IV 188
IG G +GSV + PSGQ++A+K+ S + + +K+ L +++ + +R + IV
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE---QKQLLMDLDVV--MRSSDCPYIV 84
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVADALSYLHHD 247
+ YG ++ E + ++ + + I AL++L +
Sbjct: 85 QFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL----A 303
I+HRDI N+LLD + DFGI+ L DS T AG Y+APE A
Sbjct: 145 L--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSA 201
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
+ DV+S G+ E+ G+ P +S+ +L +++ P S S
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-------QLTQVVKGDPPQLSNSE 254
Query: 364 QEKLR-SIVEVVFSCLNESPESRPTMK 389
+ + S + V CL + RP K
Sbjct: 255 EREFSPSFINFVNLCLTKDESKRPKYK 281
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 133 IGNGGHGSVYRAELPS------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
IG G G V++A P +VA+K +D D F E + E + N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAALMAEFDNPN 111
Query: 187 IVKLYGFCSHARHSFLVYEFLKRG---------------------XXXXXXXXXXXXQEL 225
IVKL G C+ + L++E++ G L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 226 GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI------AK 279
++++ + + VA ++YL F VHRD++++N L+ +ADFG+ A
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 280 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+ K D ++ A ++ PE + + T + DV+++GV+ E+
Sbjct: 229 YYKADGND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G V R ++ +GQ A K ++ S + D ++ E ++H NIV+L+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR--DHQKLEREARICRLLKHPNIVRLH 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
S H +L+++ + G E S + I+ + +A+ + H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVLHCHQ---MG 141
Query: 252 IVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI 308
+VHRD+ +NLLL + + +ADFG+A ++ + W FAGT GY++PE+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 309 TEKCDVYSFGVLALEVIKGKHP 330
+ D+++ GV+ ++ G P
Sbjct: 202 GKPVDLWACGVILYILLVGYPP 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL- 190
IGNG G VY+A+L SG++VAIKK + DK+ E++ + ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 191 YGFCSHAR-----HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
Y F S + LV +++ Q L + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304
I HRDI +NLLLD + + DFG AK L N + Y Y APEL +
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 305 -TMKITEKCDVYSFGVLALEVIKGK 328
T DV+S G + E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 23/225 (10%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 1 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 56
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 57 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 116
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 117 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 173
Query: 282 KPDSSNWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEV 324
G +++PE T DV+SFGV+ E+
Sbjct: 174 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 192 GFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+ AR +LV + + + +I + L Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-----LIYQILRGLKYIH 138
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT 305
I+HRD+ NL ++ + E + DFG+A+ + T + T Y APE+
Sbjct: 139 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLN 192
Query: 306 -MKITEKCDVYSFGVLALEVIKGK 328
M + D++S G + E++ G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFH-SPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL 190
+G G G V E +G VA+K + + S +V K + E++ L RH +I+KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKL 76
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y S F+V E++ G +E+ + + + + A+ Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM-- 131
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKIT 309
+VHRD+ +N+LLD A +ADFG++ + D G+ Y APE ++ +
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 310 EKCDVYSFGVLALEVIKGKHPRD 332
+ D++S GV+ ++ G P D
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFD 212
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP--------LPSDQIVDKKEFL 173
AT+ ++ IG G +G+VY+A P SG VA+K P LP V + L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPI-STVREVALL 65
Query: 174 TEVEALTEIRHRNIVKLYGFCSHARHS-----FLVYEFLKRGXXXXXXXXXXXXQELGWS 228
+EA H N+V+L C+ +R LV+E + + L
Sbjct: 66 RRLEAF---EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAE 120
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
++++ L +LH +C IVHRD+ +N+L+ +ADFG+A+ +
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-L 176
Query: 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328
T T Y APE+ D++S G + E+ + K
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V + + + Q A+K + ++ D L EVE L ++ H NI+KL+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKKLDHPNIMKLF 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++V E G E +IK V ++Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVFSGITYMHKH---N 141
Query: 252 IVHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI 308
IVHRD+ +N+LL + + + + DFG++ + + + + GT Y+APE+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRGT-Y 199
Query: 309 TEKCDVYSFGVLALEVIKGKHP 330
EKCDV+S GV+ ++ G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 107
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ +L Q L + + L Y+H
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 164
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 91
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---AN 148
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLAFRHENIIGIN 89
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 146
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 111 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 166
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + + T Y APE+ M
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---YVATRWYRAPEIMLNWM 221
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V + + + Q A+K + ++ D L EVE L ++ H NI+KL+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKKLDHPNIMKLF 87
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++V E G E +IK V ++Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVFSGITYMHKH---N 141
Query: 252 IVHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI 308
IVHRD+ +N+LL + + + + DFG++ + + + + GT Y+APE+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRGT-Y 199
Query: 309 TEKCDVYSFGVLALEVIKGKHP 330
EKCDV+S GV+ ++ G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 42/270 (15%)
Query: 152 VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYE----- 205
VA+K S +D+ K+ ++E++ ++ + +H NIV L G C+H ++ E
Sbjct: 64 VAVKMLKSTAHADE---KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 206 ----FLKRGXXXXXXXXXXXXQE-----------LGWSQRMNVIKGVADALSYL-HHDCF 249
FL+R Q+ L ++ VA +++L +C
Sbjct: 121 DLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC- 179
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMK 307
+HRD++++N+LL A + DFG+A+ + DS+ + ++APE +
Sbjct: 180 ---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 236
Query: 308 ITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
T + DV+S+G+L E+ G +P + ++S F + +M P AP
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAF-AP------- 287
Query: 367 LRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
++I ++ +C P RPT + + LQ
Sbjct: 288 -KNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + D+G+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTE 175
+D ++++ IGNG +G V A +GQ VAIKK P D + + K L E
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRE 104
Query: 176 VEALTEIRHRNIVKLYGFCSHA------RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQ 229
++ L +H NI+ + + ++V + ++ Q L
Sbjct: 105 LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQPLTLEH 160
Query: 230 RMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL--KPDSSN 287
+ + L Y+H ++HRD+ NLL++ E + DFG+A+ L P
Sbjct: 161 VRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 217
Query: 288 W--TEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKH 329
+ TE+ T Y APEL ++ + T+ D++S G + E++ +
Sbjct: 218 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 23/225 (10%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 10 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 65
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 282 KPDSSNWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEV 324
G +++PE T DV+SFGV+ E+
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
+DF+ +G G G V++ + PSG V+A K H + + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 184 HRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
IV YG F S S + +++ + VIKG L+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD-------PR 355
+ + D++S G+ +E+ G++P + S + + E+LD P+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS--RPPMAIFELLDYIVNEPPPK 232
Query: 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
LP+ S++ + + V CL ++P R +K
Sbjct: 233 LPSGVFSLEFQ-----DFVNKCLIKNPAERADLK 261
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 87
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET--CTRFYTAE-IVSA 144
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL ++ D+++ G + +++ G P
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 21/221 (9%)
Query: 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTE 175
+D ++++ IGNG +G V A +GQ VAIKK P D + + K L E
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRE 103
Query: 176 VEALTEIRHRNIVKLYGFCSHA------RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQ 229
++ L +H NI+ + + ++V + ++ Q L
Sbjct: 104 LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQPLTLEH 159
Query: 230 RMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL--KPDSSN 287
+ + L Y+H ++HRD+ NLL++ E + DFG+A+ L P
Sbjct: 160 VRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 216
Query: 288 W--TEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVI 325
+ TE+ T Y APEL ++ + T+ D++S G + E++
Sbjct: 217 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+ + + T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM---TGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 119 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIV---DKKEFLT 174
+I DF +G G G V+ AE + Q AIK L D ++ D + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIK----ALKKDVVLMDDDVECTMV 66
Query: 175 EVEALT-EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNV 233
E L+ H + ++ + F V E+L G + S+
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFY 123
Query: 234 IKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG 293
+ L +LH IV+RD+ N+LLD + +ADFG+ K + F G
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG 180
Query: 294 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
T Y+APE+ K D +SFGVL E++ G+ P
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + T T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGXVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAI+K SP + L E++ L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 91
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 148
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + TE+ T Y APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 115/287 (40%), Gaps = 39/287 (13%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G +VA+K+ P Q ++F E++ L + I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 74
Query: 188 VKLYGFC-SHARHSF-LVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL- 244
VK G R S LV E+L G L S+ + + + YL
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 132
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPE 301
C VHRD++++N+L++ E +ADFG+AK L D + + APE
Sbjct: 133 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN-TDIELD----------E 350
+ + DV+SFGV+ E+ D S S+ FL E D
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFTYC---DKSCSPSAEFLRMMGCERDVPALCRLLELL 245
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQI 397
RLPAP E + E++ C SP+ RP+ + QL +
Sbjct: 246 EEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQLDM 288
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 121 VRATNDFDAQYCIGNGGHGSVYRA--ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEA 178
R T+D+ +G G V R + P+ Q A K ++ S + D ++ E
Sbjct: 27 TRFTDDYQLFEELGKGAFSVVRRCVKKTPT-QEYAAKIINTKKLSAR--DHQKLEREARI 83
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
++H NIV+L+ S +LV++ + G E S + I +
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIHQIL 140
Query: 239 DALSYLH-HDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGT 294
++++++H HD IVHRD+ +NLLL + + +ADFG+A ++ + W FAGT
Sbjct: 141 ESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGT 196
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
GY++PE+ + D+++ GV+ ++ G P
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 127 FDAQYCIGNGGHGSVY---RAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
F+ +G G G V+ + P SG + A+K + ++ D+ E + L ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKA--TLKVRDRVRTKMERDILADV 87
Query: 183 RHRNIVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADAL 241
H +VKL Y F + + +L+ +FL+ G E + +A L
Sbjct: 88 NHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALGL 143
Query: 242 SYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
+LH I++RD+ +N+LLD E + DFG++K F GT Y+APE
Sbjct: 144 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + D +S+GVL E++ G P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 9 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 64
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 182 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 115/287 (40%), Gaps = 39/287 (13%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G +VA+K+ P Q ++F E++ L + I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 86
Query: 188 VKLYGFC-SHARHSF-LVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL- 244
VK G R S LV E+L G L S+ + + + YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 144
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPE 301
C VHRD++++N+L++ E +ADFG+AK L D + + APE
Sbjct: 145 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN-TDIELD----------E 350
+ + DV+SFGV+ E+ D S S+ FL E D
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYC---DKSCSPSAEFLRMMGCERDVPALSRLLELL 257
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQI 397
RLPAP E + E++ C SP+ RP+ + QL +
Sbjct: 258 EEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQLDM 300
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E+ + H+++V +GF F+V E +R + L + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYL 123
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294
+ + YLH + ++HRD+ NL L+ + E + DFG+A ++ D GT
Sbjct: 124 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354
Y+APE+ + + DV+S G + ++ GK P + S + ++L I+ +E P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIP 237
Query: 355 RLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTM 388
+ P + S+ +K+ L P +RPT+
Sbjct: 238 KHINPVAASLIQKM----------LQTDPTARPTI 262
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E+ + H+++V +GF F+V E +R + L + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYL 123
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294
+ + YLH + ++HRD+ NL L+ + E + DFG+A ++ D GT
Sbjct: 124 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354
Y+APE+ + + DV+S G + ++ GK P + S + ++L I+ +E P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIP 237
Query: 355 RLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTM 388
+ P + S+ +K+ L P +RPT+
Sbjct: 238 KHINPVAASLIQKM----------LQTDPTARPTI 262
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 3 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 58
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 175
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 176 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 87
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 144
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 133 IGNGGHGSVYRA--ELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G G GSV + + Q+ VAIK + D +E + E + + ++ + IV+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 190 LYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
L G C A LV E G +E+ S ++ V+ + YL F
Sbjct: 401 LIGVC-QAEALMLVMEMA--GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT-EFAGTY--GYVAPELAYTM 306
VHR+++++N+LL A ++DFG++K L D S +T AG + + APE
Sbjct: 458 ---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 307 KITEKCDVYSFGVLALEVIK-GKHP 330
K + + DV+S+GV E + G+ P
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 16 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 71
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 189 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 27/228 (11%)
Query: 115 LVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIV 167
V DE A +G G G VY + G V VAIK + + +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMR 61
Query: 168 DKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE--- 224
++ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 225 ----LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 281 LKPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+ +++ G +++PE T DV+SFGV+ E+
Sbjct: 179 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 87
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 144
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 88
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 145
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 146 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 65
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 122
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 123 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 90
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 91 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 147
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 148 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP-----LPSDQIVDKKEFLTEV 176
AT+ ++ IG G +G+VY+A P SG VA+K P LP V + L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI-STVREVALLRRL 60
Query: 177 EALTEIRHRNIVKLYGFCSHARHS-----FLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
EA H N+V+L C+ +R LV+E + + L
Sbjct: 61 EAF---EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIK 115
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++++ L +LH +C IVHRD+ +N+L+ +ADFG+A+ + +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV 172
Query: 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328
T Y APE+ D++S G + E+ + K
Sbjct: 173 V-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP-----LPSDQIVDKKEFLTEV 176
AT+ ++ IG G +G+VY+A P SG VA+K P LP V + L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI-STVREVALLRRL 60
Query: 177 EALTEIRHRNIVKLYGFCSHARHS-----FLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
EA H N+V+L C+ +R LV+E + + L
Sbjct: 61 EAF---EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIK 115
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++++ L +LH +C IVHRD+ +N+L+ +ADFG+A+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPV 171
Query: 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328
T Y APE+ D++S G + E+ + K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFH-SPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G V + EL +G VA+K + + S +V K E++ L RH +I+KLY
Sbjct: 26 VGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLFRHPHIIKLY 82
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
S F+V E++ G E + + + + + Y H
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRLFQQILSGVDYCHRHM--- 136
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
+VHRD+ +N+LLD A +ADFG++ + D G+ Y APE ++ +
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 311 KCDVYSFGVLALEVIKGKHPRD 332
+ D++S GV+ ++ G P D
Sbjct: 196 EVDIWSSGVILYALLCGTLPFD 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 41/235 (17%)
Query: 121 VRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKF-HSPLPSDQIVDKKEFLTEVEA 178
+R +DF+ +G G G V +A + AIKK H+ I L+EV
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVML 55
Query: 179 LTEIRHRNIVKLYGFCSHARH-------------SFLVYEFLKRGXXXXXXXXXXXXQEL 225
L + H+ +V+ Y R+ F+ E+ + Q+
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 226 GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK------ 279
R+ + + +ALSY+H I+HRD+ N+ +D + DFG+AK
Sbjct: 116 DEYWRL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 280 -FLKPDSS-------NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVI 325
LK DS N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E+ + H+++V +GF F+V E +R + L + +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYL 127
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294
+ + YLH + ++HRD+ NL L+ + E + DFG+A ++ D GT
Sbjct: 128 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354
Y+APE+ + + DV+S G + ++ GK P + S + ++L I+ +E P
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIP 241
Query: 355 RLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTM 388
+ P + S+ +K+ L P +RPT+
Sbjct: 242 KHINPVAASLIQKM----------LQTDPTARPTI 266
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 88
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 145
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 146 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 57
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 116
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 117 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 92
Query: 181 EIRHRNIVKLYGFCSHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ H VKLY FC + + K G E R + +
Sbjct: 93 RLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVS 148
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGY 297
AL YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT Y
Sbjct: 149 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
V+PEL + D+++ G + +++ G P
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 132 CIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDK--------KEFLTEVEALTEI 182
IG G V A + +G+ VA+K I+DK ++ EV +
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVK----------IIDKTQLNSSSLQKLFREVRIXKVL 70
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
H NIVKL+ + +LV E+ G +E + + + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKE---KEARAKFRQIVSAVQ 127
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
Y H IVHRD+ ++NLLLD + +ADFG + + F G Y APEL
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPEL 183
Query: 303 AYTMKIT-EKCDVYSFGVLALEVIKGKHPRD 332
K + DV+S GV+ ++ G P D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 115/287 (40%), Gaps = 39/287 (13%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G +VA+K+ P Q ++F E++ L + I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 73
Query: 188 VKLYGFC-SHARHSF-LVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL- 244
VK G R S LV E+L G L S+ + + + YL
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 131
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPE 301
C VHRD++++N+L++ E +ADFG+AK L D + + APE
Sbjct: 132 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN-----------TDIELDE 350
+ + DV+SFGV+ E+ D S S+ FL + +
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFTYC---DKSCSPSAEFLRMMGSERDVPALSRLLELL 244
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQI 397
RLPAP E + E++ C SP+ RP+ + QL +
Sbjct: 245 EEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQLDM 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 10 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 65
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 183 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++++D + +G G V R +G A K ++ S + K E E ++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 85
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
+H NIV+L+ +LV++ + G E S + I+ + ++++
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIA 142
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y H + IVHR++ +NLLL + + +ADFG+A + DS W FAGT GY++
Sbjct: 143 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 198
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ ++ D+++ GV+ ++ G P
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 87
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 144
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 9 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 64
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 182 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 85
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 142
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 143 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 87
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 144
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 108 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ + T Y APE+ M
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAPEIMLNWMHY 220
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 64
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 121
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 122 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 87
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 144
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 145 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 85
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 142
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 143 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 127 FDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR 185
+D +G G G V+R E +G A K +P SD+ +KE ++ ++ +RH
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE----IQTMSVLRHP 214
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+V L+ ++YEF+ G ++ + + ++ V L ++H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGG--ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 246 HDCFPPIVHRDISSKNLLLDLEF--EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
+ + VH D+ +N++ + E + DFG+ L P S GT + APE+A
Sbjct: 273 ENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVA 328
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
+ D++S GVL+ ++ G P
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 62
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 119
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 24/236 (10%)
Query: 101 NPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSP 160
+P+ + +L +GK + TN IGNG G V++A+L VAIKK
Sbjct: 20 DPNKVIKVLASDGKTGEQREIAYTN----CKVIGNGSFGVVFQAKLVESDEVAIKKV--- 72
Query: 161 LPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFC----SHARHSFL--VYEFLKRGXXXX 214
+ DK+ E++ + ++H N+V L F FL V E++
Sbjct: 73 -----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA 127
Query: 215 XXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEA-HVA 273
Q + + + +L+Y+H I HRDI +NLLLD +
Sbjct: 128 SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLI 184
Query: 274 DFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVIKGK 328
DFG AK L N + Y Y APEL + T D++S G + E+++G+
Sbjct: 185 DFGSAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 85
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 142
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 143 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DF +A+ T + T Y APE+ M
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 29/285 (10%)
Query: 113 GKLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIV 167
G + I++ T +F +G+G G+VY+ +P G+ V AIK+
Sbjct: 1 GAMALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-- 57
Query: 168 DKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW 227
KE L E + + + ++ +L G C + L+ + + G +G
Sbjct: 58 -NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGS 113
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
+N +A+ ++YL +VHRD++++N+L+ + DFG+AK L +
Sbjct: 114 QYLLNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 170
Query: 288 WTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNT 344
+ G ++A E T + DV+S+GV E++ G P D I +S +++
Sbjct: 171 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISS 227
Query: 345 DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
+E E RLP P + + ++ C +SRP +
Sbjct: 228 ILEKGE----RLPQPPICTID----VYMIMVKCWMIDADSRPKFR 264
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMS 63
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 120
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+PEL + D+++ G + +++ G P
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSP-----LPSDQIVDKKEFLTEV 176
AT+ ++ IG G +G+VY+A P SG VA+K P LP V + L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI-STVREVALLRRL 60
Query: 177 EALTEIRHRNIVKLYGFCSHARHS-----FLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
EA H N+V+L C+ +R LV+E + + L
Sbjct: 61 EAF---EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIK 115
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++++ L +LH +C IVHRD+ +N+L+ +ADFG+A+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPV 171
Query: 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328
T Y APE+ D++S G + E+ + K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S VAIK + SD + +K
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREK-- 57
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 114
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKAS 170
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIEL 348
G ++APE + T DV+ FGV E++ G P + ++ + IE
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP---FQGVKNNDVIGRIEN 227
Query: 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 228 GE----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 170 KEFLTEVEALTEIRHRNIVKLYGFCS--HARHSFLVYEFLKRGXXXXXXXXXXXXQELGW 227
++ E+ L ++ H N+VKL + H ++V+E + +G ++
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
++IKG+ YLH + I+HRDI NLL+ + +ADFG++ K +
Sbjct: 141 FYFQDLIKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 288 WTEFAGTYGYVAPE-LAYTMKI--TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT 344
+ GT ++APE L+ T KI + DV++ GV + G+ P F+ L++
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP--FMDE-RIMCLHS 250
Query: 345 DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESR---PTMKI 390
I+ + P P + E L+ ++ L+++PESR P +K+
Sbjct: 251 KIKSQALEFPDQP----DIAEDLKDLIT---RMLDKNPESRIVVPEIKL 292
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE---- 181
D+D +G G +G V +A+ + + +IVD K + E + +
Sbjct: 8 DWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 182 ---IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIKG 236
+ H N+VK YG +L E+ G E +QR ++ G
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAG 117
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGT 294
V YLH I HRDI +NLLLD ++DFG+A + ++ + GT
Sbjct: 118 VV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 295 YGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE---- 181
D+D +G G +G V +A+ + + +IVD K + E + +
Sbjct: 8 DWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 182 ---IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIKG 236
+ H N+VK YG +L E+ G E +QR ++ G
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAG 117
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGT 294
V YLH I HRDI +NLLLD ++DFG+A + ++ + GT
Sbjct: 118 VV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 295 YGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E+ + H+++V +GF F+V E +R + L + +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYL 121
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294
+ + YLH + ++HRD+ NL L+ + E + DFG+A ++ D GT
Sbjct: 122 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354
Y+APE+ + + DV+S G + ++ GK P + S + ++L I+ +E P
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIP 235
Query: 355 RLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTM 388
+ P + S+ +K+ L P +RPT+
Sbjct: 236 KHINPVAASLIQKM----------LQTDPTARPTI 260
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE---- 181
D+D +G G +G V +A+ + + +IVD K + E + +
Sbjct: 8 DWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 182 ---IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIKG 236
+ H N+VK YG +L E+ G E +QR ++ G
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAG 117
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGT 294
V YLH I HRDI +NLLLD ++DFG+A + ++ + GT
Sbjct: 118 VV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 295 YGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +G+V A + +G VAIKK + P S+ K E+ L +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA--KRAYRELRLLKHMRHENVIGLL 90
Query: 192 G-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
F +L ++LG + ++ + L Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG-- 148
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAG---TYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + DFG+A+ + DS E G T Y APE+ M
Sbjct: 149 -IIHRDLKPGNLAVNEDCELKILDFGLAR--QADS----EMXGXVVTRWYRAPEVILNWM 201
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ T+ D++S G + E+I GK
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGK 223
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLT-EVEALTEIRHRNIVKL 190
IGNG G VY+A+L SG++VAIKK ++ K F E++ + ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 191 -YGFCSHAR-----HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
Y F S + LV +++ Q L + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
H I HRDI +NLLLD + + DFG AK L N + Y Y APEL
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 304 Y-TMKITEKCDVYSFGVLALEVIKGK 328
+ T DV+S G + E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL-------TEVE 177
D+D +G G +G V A + + VA+K IVD K + E+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIX 57
Query: 178 ALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 116
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 117 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 169
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLT-EVEALTEIRHRNIVKL 190
IGNG G VY+A+L SG++VAIKK ++ K F E++ + ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 191 -YGFCSHAR-----HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
Y F S + LV +++ Q L + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
H I HRDI +NLLLD + + DFG AK L N + Y Y APEL
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 304 Y-TMKITEKCDVYSFGVLALEVIKGK 328
+ T DV+S G + E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL-------TEVE 177
D+D +G G +G V A + + VA+K IVD K + E+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIX 56
Query: 178 ALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + SG+ VAIKK P S +I K+ + E+ L ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAY-RELLLLKHMQHENVIGLL 89
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ A Y+F + + ++ + L Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG--- 146
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITE 310
+VHRD+ NL ++ + E + DFG+A+ + T + T Y APE+ + M +
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 311 KCDVYSFGVLALEVIKGK---HPRDFLSSIS 338
D++S G + E++ GK +D+L ++
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLT-EVEALTEIRHRNIVKL 190
IGNG G VY+A+L SG++VAIKK ++ K F E++ + ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 191 -YGFCSHAR-----HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
Y F S + LV +++ Q L + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
H I HRDI +NLLLD + + DFG AK L N + Y Y APEL
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 304 Y-TMKITEKCDVYSFGVLALEVIKGK 328
+ T DV+S G + E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 33/286 (11%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S + VAIK + SD + +K
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREK-- 62
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 119
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 120 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 175
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
G ++APE + T DV+ FGV E++ H + ++ + IE
Sbjct: 176 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVIGRIENG 233
Query: 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 234 E----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 271
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL-------TEVE 177
D+D +G G +G V A + + VA+K IVD K + E+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIX 56
Query: 178 ALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 33/286 (11%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S + VAIK + SD + +K
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREK-- 59
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 116
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 117 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 172
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
G ++APE + T DV+ FGV E++ H + ++ + IE
Sbjct: 173 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVIGRIENG 230
Query: 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 231 E----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 268
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 127 FDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR 185
+D +G G G V+R E +G A K +P SD+ +KE ++ ++ +RH
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE----IQTMSVLRHP 108
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+V L+ ++YEF+ G ++ + + ++ V L ++H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGG--ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 246 HDCFPPIVHRDISSKNLLLDLEF--EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
+ + VH D+ +N++ + E + DFG+ L P S GT + APE+A
Sbjct: 167 ENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVA 222
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
+ D++S GVL+ ++ G P
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 33/286 (11%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S + VAIK + SD + +K
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREK-- 85
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 142
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 143 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 198
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
G ++APE + T DV+ FGV E++ H + ++ + IE
Sbjct: 199 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVIGRIENG 256
Query: 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 257 E----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 294
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E+ + H+++V +GF F+V E +R + L + +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYL 145
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294
+ + YLH + ++HRD+ NL L+ + E + DFG+A ++ D GT
Sbjct: 146 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354
Y+APE+ + + DV+S G + ++ GK P + S + ++L I+ +E P
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIP 259
Query: 355 RLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTM 388
+ P + S+ +K+ L P +RPT+
Sbjct: 260 KHINPVAASLIQKM----------LQTDPTARPTI 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 33/286 (11%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S + VAIK + SD + +K
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREK-- 60
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 117
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 118 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 173
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
G ++APE + T DV+ FGV E++ H + ++ + IE
Sbjct: 174 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVIGRIENG 231
Query: 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 232 E----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 269
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S VAIK + SD + +K
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREK-- 57
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 114
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 170
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIEL 348
G ++APE + T DV+ FGV E++ G P + ++ + IE
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP---FQGVKNNDVIGRIEN 227
Query: 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 228 GE----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E+ + H+++V +GF F+V E +R + L + +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYL 147
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294
+ + YLH + ++HRD+ NL L+ + E + DFG+A ++ D GT
Sbjct: 148 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354
Y+APE+ + + DV+S G + ++ GK P + S + ++L I+ +E P
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR--IKKNEYSIP 261
Query: 355 RLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTM 388
+ P + S+ +K+ L P +RPT+
Sbjct: 262 KHINPVAASLIQKM----------LQTDPTARPTI 286
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 18/249 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIK----ILEKRHIIKENKVPYVTRERDVMS 84
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 141
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
+PEL + D+++ G + +++ G P F + I+L+ +
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEKFFP 256
Query: 359 PSRSVQEKL 367
+R + EKL
Sbjct: 257 KARDLVEKL 265
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDK------KEFLTEVEALTEIRHR 185
+G+G G+V++ +P G+ + I P+ I DK + + A+ + H
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA 93
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+IV+L G C + LV ++L G LG +N +A + YL
Sbjct: 94 HIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLE 150
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELA 303
+VHR+++++N+LL + VADFG+A L PD ++E ++A E
Sbjct: 151 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 304 YTMKITEKCDVYSFGVLALEVI 325
+ K T + DV+S+GV E++
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELM 229
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 55
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 56 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 114
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 115 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 57
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 116
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 117 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 18/249 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIK----ILEKRHIIKENKVPYVTRERDVMS 84
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 141
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
+PEL + D+++ G + +++ G P F + I+L+ +
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEKFFP 256
Query: 359 PSRSVQEKL 367
+R + EKL
Sbjct: 257 KARDLVEKL 265
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGT 294
+ AL YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 57
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 116
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 117 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 18/249 (7%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV--DKKEFLT-EVEALT 180
DF +G G +V A EL + + AIK L I+ +K ++T E + ++
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIK----ILEKRHIIKENKVPYVTRERDVMS 69
Query: 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ H VKLY + + K G E R + + A
Sbjct: 70 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTAE-IVSA 126
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS--SNWTEFAGTYGYV 298
L YLH I+HRD+ +N+LL+ + + DFG AK L P+S + F GT YV
Sbjct: 127 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 299 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358
+PEL + D+++ G + +++ G P F + I+L+ +
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEKFFP 241
Query: 359 PSRSVQEKL 367
+R + EKL
Sbjct: 242 KARDLVEKL 250
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
+DF+ +G G G V++ + PSG V+A K H + + + + + E++ L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 124
Query: 184 HRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
IV YG F S S + +++ + VIKG L+
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 180
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 181 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 236
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + D++S G+ +E+ G++P
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 38 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 93
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 210
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 211 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 33/286 (11%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S + VAIK + SD + +K
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREK-- 57
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLI 114
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 170
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
G ++APE + T DV+ FGV E++ H + ++ + IE
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVIGRIENG 228
Query: 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 229 E----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + FG+A+ + T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFH---SPLPSDQIVDKKEFLTEVEALT 180
+DF+ +G G G V++ + PSG V+A K H P +QI+ E++ L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII------RELQVLH 86
Query: 181 EIRHRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E IV YG F S S + +++ + VIKG
Sbjct: 87 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--- 143
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
L+YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++
Sbjct: 144 -LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMS 198
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE + + D++S G+ +E+ G++P
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 122 RATNDFDAQYCIGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALT 180
R DF+ C+G GG G V+ A+ AIK+ LP+ ++ +K + EV+AL
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREK-VMREVKALA 58
Query: 181 EIRHRNIVKLYGF------------CSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS 228
++ H IV+ + S + ++ + ++ +E S
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 229 QRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288
+++ +A+A+ +LH ++HRD+ N+ ++ V DFG+ + D
Sbjct: 119 VCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 289 TEFA------------GTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 325
T GT Y++PE + + K D++S G++ E++
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--- 181
D+D +G G +G V A + + VA+K IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK----------IVDMKRAVDCPENIKKEIC 56
Query: 182 ----IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIK 235
+ H N+VK YG +L E+ G E +QR ++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA 115
Query: 236 GVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293
GV YLH I HRDI +NLLLD ++DFG+A + ++ + G
Sbjct: 116 GVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 294 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
T YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFH---SPLPSDQIVDKKEFLTEVEALT 180
+DF+ +G G G V++ + PSG V+A K H P +QI+ E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII------RELQVLH 59
Query: 181 EIRHRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E IV YG F S S + +++ + VIKG
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--- 116
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
L+YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++
Sbjct: 117 -LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMS 171
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE + + D++S G+ +E+ G++P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFH---SPLPSDQIVDKKEFLTEVEALT 180
+DF+ +G G G V++ + PSG V+A K H P +QI+ E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII------RELQVLH 59
Query: 181 EIRHRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E IV YG F S S + +++ + VIKG
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--- 116
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
L+YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++
Sbjct: 117 -LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMS 171
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE + + D++S G+ +E+ G++P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE---- 181
D+D +G G +G V +A+ + + +IVD K + E + +
Sbjct: 8 DWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 58
Query: 182 ---IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIKG 236
+ H N+VK YG +L E+ G E +QR ++ G
Sbjct: 59 NAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAG 117
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGT 294
V YLH I HRDI +NLLLD ++DFG+A + ++ + GT
Sbjct: 118 VV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 295 YGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDK------KEFLTEVEALTEIRHR 185
+G+G G+V++ +P G+ + I P+ I DK + + A+ + H
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA 75
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+IV+L G C + LV ++L G LG +N +A + YL
Sbjct: 76 HIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLE 132
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELA 303
+VHR+++++N+LL + VADFG+A L PD ++E ++A E
Sbjct: 133 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 304 YTMKITEKCDVYSFGVLALEVI 325
+ K T + DV+S+GV E++
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELM 211
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 74
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 131
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 241
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 242 PQPPICTID----VYMIMVKCWMIDADSRPKFR 270
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 49/293 (16%)
Query: 133 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A + + VA+K PS + +++ ++E++ L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 186 NIVKLYGFCSHARHSFLVYE---------FLKR----------GXXXXXXXXXXXXQELG 226
NIV L G C+ + ++ E FL+R E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
S V KG+A S +C +HRD++++N+LL + DFG+A+ +K DS+
Sbjct: 171 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 287 NWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLN 343
+ ++APE + T + DV+S+G+ E+ G P + + S F
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYK 282
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E ML P AP+ + +++ +C + P RPT K + Q ++
Sbjct: 283 MIKEGFRMLSPE-HAPAE--------MYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
+DF+ +G G G V++ + PSG V+A K H + + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 184 HRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
IV YG F S S + +++ + VIKG L+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LT 118
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL 302
YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++PE
Sbjct: 119 YLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPER 174
Query: 303 AYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + D++S G+ +E+ G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFH---SPLPSDQIVDKKEFLTEVEALT 180
+DF+ +G G G V++ + PSG V+A K H P +QI+ E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII------RELQVLH 59
Query: 181 EIRHRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E IV YG F S S + +++ + VIKG
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--- 116
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
L+YL I+HRD+ N+L++ E + DFG++ L +N F GT Y++
Sbjct: 117 -LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMS 171
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE + + D++S G+ +E+ G++P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 29/256 (11%)
Query: 148 SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHSFLVYE 205
+G++VA+K + K+ E++ L + H +I+K G C + LV E
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
++ G +G +Q + + + + ++YLH + +HR+++++N+LLD
Sbjct: 99 YVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLD 151
Query: 266 LEFEAHVADFGIAKFLKPDSSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLA 321
+ + DFG+AK + P+ + + APE K DV+SFGV
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 322 LEVI-----KGKHPRDFLSSIS-SSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEV 373
E++ P FL I + T + L E+L+ RLP P + E + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCE----VYHL 266
Query: 374 VFSCLNESPESRPTMK 389
+ +C RPT +
Sbjct: 267 MKNCWETEASFRPTFE 282
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + D G+A+ + T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM---TGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S VAIK + SD + +K
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREK-- 437
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 494
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 495 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKAS 550
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIEL 348
G ++APE + T DV+ FGV E++ G P + ++ + IE
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP---FQGVKNNDVIGRIEN 607
Query: 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 608 GE----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 73
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 130
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 240
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 241 PQPPICTID----VYMIMVKCWMIDADSRPKFR 269
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++++D + +G G V R +G A K ++ S + K E E ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 62
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
+H NIV+L+ +LV++ + G E S + I+ + ++++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIA 119
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y H + IVHR++ +NLLL + + +ADFG+A + DS W FAGT GY++
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 175
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ ++ D+++ GV+ ++ G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++++D + +G G V R +G A K ++ S + K E E ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 62
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
+H NIV+L+ +LV++ + G E + + I+ + ++++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE---ADASHCIQQILESIA 119
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y H + IVHR++ +NLLL + + +ADFG+A + DS W FAGT GY++
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 175
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ ++ D+++ GV+ ++ G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 75
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 132
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 133 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 242
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 243 PQPPICTID----VYMIMVKCWMIDADSRPKFR 271
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 71
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 128
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 238
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 239 PQPPICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 29/256 (11%)
Query: 148 SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHSFLVYE 205
+G++VA+K + K+ E++ L + H +I+K G C + LV E
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
++ G +G +Q + + + + ++YLH + +HR+++++N+LLD
Sbjct: 99 YVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLD 151
Query: 266 LEFEAHVADFGIAKFLKPDSSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLA 321
+ + DFG+AK + P+ + + APE K DV+SFGV
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 322 LEVI-----KGKHPRDFLSSIS-SSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEV 373
E++ P FL I + T + L E+L+ RLP P + E + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCE----VYHL 266
Query: 374 VFSCLNESPESRPTMK 389
+ +C RPT +
Sbjct: 267 MKNCWETEASFRPTFE 282
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 74
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 131
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 241
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 242 PQPPICTID----VYMIMVKCWMIDADSRPKFR 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 78
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 135
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 245
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 246 PQPPICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ AR S + +L Q+L +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + D G+A+ T + T Y APE+ M
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMTGYVATRWYRAPEIMLNWMHY 200
Query: 309 TEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 72
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAK 129
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 239
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 240 PQPPICTID----VYMIMVKCWMIDADSRPKFR 268
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 72
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 129
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 239
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 240 PQPPICTID----VYMIMVKCWMIDADSRPKFR 268
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 143/339 (42%), Gaps = 61/339 (17%)
Query: 86 RKRNSDSGDRQRSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAE 145
RKR S G + R ++ + +I NFE L N ++ +G G G+V
Sbjct: 6 RKRGSRGGKKGRKSR----IANIPNFEQSL--------KNLVVSEKILGYGSSGTVVFQG 53
Query: 146 LPSGQVVAIKKFHSPLPSDQIVDKKEF-LTEVEALTEIR-HRNIVKLYGFCSHARHSFLV 203
G+ VA+K+ ++D + L E++ LTE H N+++ Y + R ++
Sbjct: 54 SFQGRPVAVKRM--------LIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA 105
Query: 204 YEFLKRGXXXXXXXXXXXXQELGWSQRMN---VIKGVADALSYLHHDCFPPIVHRDISSK 260
E + L + N +++ +A +++LH I+HRD+ +
Sbjct: 106 LELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQ 162
Query: 261 NLLLDL--EFEAH-----------VADFGIAKFLKPDSS----NWTEFAGTYGYVAPEL- 302
N+L+ F A ++DFG+ K L N +GT G+ APEL
Sbjct: 163 NILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL 222
Query: 303 --AYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ ++T D++S G + ++ KGKHP S S+ + LDEM
Sbjct: 223 EESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM-------- 274
Query: 360 SRSVQEK--LRSIVEVVFSCLNESPESRPT-MKIVSQQL 395
+ + ++ + +++ ++ P RPT MK++ L
Sbjct: 275 -KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 143/339 (42%), Gaps = 61/339 (17%)
Query: 86 RKRNSDSGDRQRSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAE 145
RKR S G + R ++ + +I NFE L N ++ +G G G+V
Sbjct: 6 RKRGSRGGKKGRKSR----IANIPNFEQSL--------KNLVVSEKILGYGSSGTVVFQG 53
Query: 146 LPSGQVVAIKKFHSPLPSDQIVDKKEF-LTEVEALTEIR-HRNIVKLYGFCSHARHSFLV 203
G+ VA+K+ ++D + L E++ LTE H N+++ Y + R ++
Sbjct: 54 SFQGRPVAVKRM--------LIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA 105
Query: 204 YEFLKRGXXXXXXXXXXXXQELGWSQRMN---VIKGVADALSYLHHDCFPPIVHRDISSK 260
E + L + N +++ +A +++LH I+HRD+ +
Sbjct: 106 LELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQ 162
Query: 261 NLLLDL--EFEAH-----------VADFGIAKFLKPDSS----NWTEFAGTYGYVAPEL- 302
N+L+ F A ++DFG+ K L N +GT G+ APEL
Sbjct: 163 NILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL 222
Query: 303 --AYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359
+ ++T D++S G + ++ KGKHP S S+ + LDEM
Sbjct: 223 EESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM-------- 274
Query: 360 SRSVQEK--LRSIVEVVFSCLNESPESRPT-MKIVSQQL 395
+ + ++ + +++ ++ P RPT MK++ L
Sbjct: 275 -KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 74
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 131
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 241
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 242 PQPPICTID----VYMIMVKCWMIDADSRPKFR 270
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI 182
++++D + +G G V R +G A K ++ S + K E E ++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 61
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALS 242
+H NIV+L+ +LV++ + G E S + I+ + ++++
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIA 118
Query: 243 YLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
Y H + IVHR++ +NLLL + + +ADFG+A + DS W FAGT GY++
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 174
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ ++ D+++ GV+ ++ G P
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 3 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 58
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG E
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N + +F + DFG+ + +
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 176 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 71
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAK 128
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 238
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 239 PQPPICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 73
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 130
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 240
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 241 PQPPICTID----VYMIMVKCWMIDADSRPKFR 269
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV A + +G VA+KK P S I+ K E+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 192 GFCSHARHSFLVYEF----LKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+ AR + EF L Q+L +I + L Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-M 306
I+HRD+ NL ++ + E + D G+A+ T + T Y APE+ M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 307 KITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E++ G+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 71
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 128
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 238
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 239 PQPPICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 132 CIGNGGHGSVYRAELPSGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
CIG G G V++ S + VAIK + SD + +K FL E + + H +I
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREK--FLQEALTMRQFDHPHI 70
Query: 188 VKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
VKL G + +++ E G +L + + ++ AL+YL
Sbjct: 71 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLESK 127
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYT 305
F VHRDI+++N+L+ + DFG++++++ DS+ + G ++APE
Sbjct: 128 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 183
Query: 306 MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365
+ T DV+ FGV E++ H + ++ + IE E RLP P
Sbjct: 184 RRFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVIGRIENGE----RLPMPPNCPP- 236
Query: 366 KLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
++ ++ C P RP + QL
Sbjct: 237 ---TLYSLMTKCWAYDPSRRPRFTELKAQL 263
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S VAIK + SD + +K
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREK-- 437
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 494
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+ +
Sbjct: 495 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKAS 550
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIEL 348
G ++APE + T DV+ FGV E++ G P + ++ + IE
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP---FQGVKNNDVIGRIEN 607
Query: 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 608 GE----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 77
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 134
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 135 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 244
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 245 PQPPICTID----VYMIMVKCWMIDADSRPKFR 273
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G+V++A+ + ++VA+K+ L D L E+ L E++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQ-ELGWSQRMNVIKGVADALSYLHHDCFP 250
+ LV+EF + E+ S ++KG L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSR--- 120
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI-T 309
++HRD+ +NLL++ E +ADFG+A+ ++ T Y P++ + K+ +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 310 EKCDVYSFGVLALEVIKGKHP 330
D++S G + E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAARP 201
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 96
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 153
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 154 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 263
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 264 PQPPICTID----VYMIMVKCWMIDADSRPKFR 292
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 46/302 (15%)
Query: 118 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIV--DKKEFLTE 175
++++ F +G G GSV A+L +K L +D I D +EFL E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 176 VEALTEIRHRNIVKLYGFCSHARHS------FLVYEFLKRGXXXXXXXXXXXXQE---LG 226
+ E H ++ KL G +R ++ F+K G + L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
+ + +A + YL F +HRD++++N +L + VADFG+++ +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKI----- 187
Query: 287 NWTEFAGTY-----------GYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFL 334
++G Y ++A E T DV++FGV E++ +G+ P
Sbjct: 188 ----YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP---- 239
Query: 335 SSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
+ N +I + RL P ++E + ++++ C + P+ RP+ + +
Sbjct: 240 ---YAGIENAEIYNYLIGGNRLKQPPECMEE----VYDLMYQCWSADPKQRPSFTCLRME 292
Query: 395 LQ 396
L+
Sbjct: 293 LE 294
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 49/293 (16%)
Query: 133 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A + + VA+K PS + +++ ++E++ L+ + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 87
Query: 186 NIVKLYGFCSHARHSFLVYE---------FLKR----------GXXXXXXXXXXXXQELG 226
NIV L G C+ + ++ E FL+R E
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
S V KG+A S +C +HRD++++N+LL + DFG+A+ +K DS+
Sbjct: 148 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 287 NWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLN 343
+ ++APE + T + DV+S+G+ E+ G P + + S F
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYK 259
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E ML P AP+ + +++ +C + P RPT K + Q ++
Sbjct: 260 MIKEGFRMLSPE-HAPAE--------MYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE---- 181
D+D +G G G V +A+ + + +IVD K + E + +
Sbjct: 7 DWDLVQTLGEGAAGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI 57
Query: 182 ---IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM--NVIKG 236
+ H N+VK YG +L E+ G E +QR ++ G
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAG 116
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGT 294
V YLH I HRDI +NLLLD ++DFG+A + ++ + GT
Sbjct: 117 VV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 295 YGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 332
YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 35/287 (12%)
Query: 123 ATNDFDAQY-------CIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKE 171
+T D++ Q CIG G G V++ S VAIK + SD + +K
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREK-- 57
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
FL E + + H +IVKL G + +++ E G +L + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--ASLI 114
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
++ AL+YL F VHRDI+++N+L+ + DFG++++++ DS+
Sbjct: 115 LYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKAS 170
Query: 292 AGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIEL 348
G ++APE + T DV+ FGV E++ G P + ++ + IE
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP---FQGVKNNDVIGRIEN 227
Query: 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E RLP P ++ ++ C P RP + QL
Sbjct: 228 GE----RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 49/293 (16%)
Query: 133 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A + + VA+K PS + +++ ++E++ L+ + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 103
Query: 186 NIVKLYGFCSHARHSFLVYE---------FLKR----------GXXXXXXXXXXXXQELG 226
NIV L G C+ + ++ E FL+R E
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
S V KG+A S +C +HRD++++N+LL + DFG+A+ +K DS+
Sbjct: 164 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 287 NWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLN 343
+ ++APE + T + DV+S+G+ E+ G P + + S F
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYK 275
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E ML P AP+ + +++ +C + P RPT K + Q ++
Sbjct: 276 MIKEGFRMLSPE-HAPAE--------MYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 37/283 (13%)
Query: 125 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
+D + +G G +G V + +PSGQ+ A+K+ + + S + +K L +++ I
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQE---QKRLLXDLD----IS 86
Query: 184 HRNI-----VKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
R + V YG ++ E Q + + +
Sbjct: 87 XRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 146
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 298
AL +LH ++HRD+ N+L++ + DFGI+ +L D + + AG Y
Sbjct: 147 KALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AGCKPYX 203
Query: 299 APEL--------AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDE 350
APE Y++ K D++S G+ +E+ + P D S + F ++ E
Sbjct: 204 APERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYD---SWGTPFQQLK-QVVE 255
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393
P+LPA S + V+ CL ++ + RPT + Q
Sbjct: 256 EPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 49/293 (16%)
Query: 133 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A + + VA+K PS + +++ ++E++ L+ + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 105
Query: 186 NIVKLYGFCSHARHSFLVYE---------FLKR----------GXXXXXXXXXXXXQELG 226
NIV L G C+ + ++ E FL+R E
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
S V KG+A S +C +HRD++++N+LL + DFG+A+ +K DS+
Sbjct: 166 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 287 NWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLN 343
+ ++APE + T + DV+S+G+ E+ G P + + S F
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYK 277
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E ML P AP+ + +++ +C + P RPT K + Q ++
Sbjct: 278 MIKEGFRMLSPE-HAPAE--------MYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 65
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 122
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 123 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 232
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 233 PQPPICTID----VYMIMVKCWMIDADSRPKFR 261
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 16 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 71
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 189 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 133 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G GG Y E+ +G+VV P K++ TE+ + + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH------QKEKMSTEIAIHKSLDNPH 87
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHH 246
+V +GF ++V E +R E + ++ + YLH+
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHN 144
Query: 247 DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM 306
+ ++HRD+ NL L+ + + + DFG+A ++ D + GT Y+APE+
Sbjct: 145 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 307 KITEKCDVYSFGVLALEVIKGKHP 330
+ + D++S G + ++ GK P
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 49/293 (16%)
Query: 133 IGNGGHGSVYRA------ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A + + VA+K PS + +++ ++E++ L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 186 NIVKLYGFCSHARHSFLVYE---------FLKR----------GXXXXXXXXXXXXQELG 226
NIV L G C+ + ++ E FL+R E
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286
S V KG+A S +C +HRD++++N+LL + DFG+A+ +K DS+
Sbjct: 171 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 287 NWTEFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLN 343
+ ++APE + T + DV+S+G+ E+ G P + + S F
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYK 282
Query: 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
E ML P AP+ + +++ +C + P RPT K + Q ++
Sbjct: 283 MIKEGFRMLSPE-HAPAE--------MYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFH---SPLPSDQIVDKKEFLTEVEALT 180
+DF+ +G G G V + + PSG ++A K H P +QI+ E++ L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII------RELQVLH 69
Query: 181 EIRHRNIVKLYG-FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
E IV YG F S S + +E+ + V++G
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG--- 126
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
L+YL I+HRD+ N+L++ E + DFG++ L +N F GT Y+A
Sbjct: 127 -LAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMA 181
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE + + D++S G+ +E+ G++P
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 12/214 (5%)
Query: 121 VRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEAL 179
R T ++ +G G V R ++ +GQ A ++ S + D ++ E
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR--DHQKLEREARIC 64
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
++H NIV+L+ S H +L+++ + G E S + I+ + +
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILE 121
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSSNWTEFAGTYG 296
A+ + H +VHR++ +NLLL + + +ADFG+A ++ + W FAGT G
Sbjct: 122 AVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG 178
Query: 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y++PE+ + D+++ GV+ ++ G P
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 17/230 (7%)
Query: 127 FDAQYCIGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR 185
+D +G+G G V+R E +G+V K ++P P +DK E+ + ++ H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP----LDKYTVKNEISIMNQLHHP 108
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
++ L+ L+ EFL G ++ ++ +N ++ + L ++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMH 166
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVA--DFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
IVH DI +N++ + + + V DFG+A L PD A T + APE+
Sbjct: 167 EHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIV 222
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP---RDFLSSISSSFLNTDIELDE 350
+ D+++ GVL ++ G P D L ++ + D E DE
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL-QNVKRCDWEFDE 271
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 71
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 128
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 238
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 239 PQPPICTID----VYMIMRKCWMIDADSRPKFR 267
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFH-SPLPSDQIVDKKEFLTEVEALTEIRHRNIVKL 190
+G+G V+ + +G++ A+K SP D ++ E+ L +I+H NIV L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE-----NEIAVLKKIKHENIVTL 71
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
H +LV + + G E S VI+ V A+ YLH +
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHEN--- 125
Query: 251 PIVHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK 307
IVHRD+ +NLL + + + DFG++K + + GT GYVAPE+
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 308 ITEKCDVYSFGVLALEVIKGKHP 330
++ D +S GV+ ++ G P
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPP 206
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 74
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 131
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 241
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 242 PQPPICTID----VYMIMRKCWMIDADSRPKFR 270
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQV-------VAIKKFHSPLPSDQIVD 168
V DE A +G G G VY + G V VAIK + + + +
Sbjct: 6 VPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRE 61
Query: 169 KKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+ EFL E + E ++V+L G S + + ++ E + RG
Sbjct: 62 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 225 ---LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281
S+ + + +AD ++YL+ + F VHRD++++N ++ +F + DFG+ + +
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 282 KPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEV 324
+++ G +++PE T DV+SFGV+ E+
Sbjct: 179 Y--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 133 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G GG Y E+ +G+VV P K++ TE+ + + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH------QKEKMSTEIAIHKSLDNPH 103
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM-NVIKGVADALSYLH 245
+V +GF ++V E +R E M I+GV YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYLH 159
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT 305
++ ++HRD+ NL L+ + + + DFG+A ++ D + GT Y+APE+
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 306 MKITEKCDVYSFGVLALEVIKGKHP 330
+ + D++S G + ++ GK P
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 91
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 148
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + E T Y APE+ K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 17/216 (7%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G V A +V VAIKK SP + L E++ L RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGIN 92
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+ ++ + Q L + + L Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---AN 149
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTMK- 307
++HRD+ NLLL+ + + DFG+A+ PD + E T Y APE+ K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 308 ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
T+ D++S G + E++ GKH D L+ I
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G+G +GSV + ++ SG +A+KK P S I+ K E+ L ++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 192 GFCSHARHSFLVYE--FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ A S + +L Q+L +I + L Y+H
Sbjct: 117 DVFTPAT-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 172
Query: 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKI 308
I+HRD+ NL ++ + E + DFG+A+ T + T Y APE+ M
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHY 229
Query: 309 TEKCDVYSFGVLALEVIKGK 328
D++S G + E++ G+
Sbjct: 230 NMTVDIWSVGCIMAELLTGR 249
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 18/219 (8%)
Query: 130 QYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV 188
QY IG G +G V A + VAIKK SP + L E++ L RH N++
Sbjct: 49 QY-IGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQTYCQRT--LREIQILLRFRHENVI 104
Query: 189 KLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
+ + + ++ + Q+L + + L Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYT 305
++HRD+ NLL++ + + DFG+A+ P+ + TE T Y APE+
Sbjct: 165 ---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 306 MK-ITEKCDVYSFGVLALEVIK------GKHPRDFLSSI 337
K T+ D++S G + E++ GKH D L+ I
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
I++RD+ N++LD E +ADFG+ K D EF GT Y+APE+ +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 312 CDVYSFGVLALEVIKGKHPRD 332
D +++GVL E++ G+ P D
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFD 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 81
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 138
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 139 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 248
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 249 PQPPICTID----VYMIMRKCWMIDADSRPKFR 277
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 94/235 (40%), Gaps = 41/235 (17%)
Query: 121 VRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKF-HSPLPSDQIVDKKEFLTEVEA 178
+R +DF+ +G G G V +A + AIKK H+ I L+EV
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVXL 55
Query: 179 LTEIRHRNIVKLYGFCSHARH-------------SFLVYEFLKRGXXXXXXXXXXXXQEL 225
L + H+ +V+ Y R+ F+ E+ + Q+
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 226 GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK------ 279
R+ + + +ALSY+H I+HR++ N+ +D + DFG+AK
Sbjct: 116 DEYWRL--FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 280 -FLKPDSS-------NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVI 325
LK DS N T GT YVA E L T EK D YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 113/287 (39%), Gaps = 39/287 (13%)
Query: 133 IGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G G GSV +G +VA+K+ P Q ++F E++ L + I
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 70
Query: 188 VKLYG--FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL- 244
VK G + LV E+L G L S+ + + + YL
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 128
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPE 301
C VHRD++++N+L++ E +ADFG+AK L D + APE
Sbjct: 129 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN-TDIELD----------E 350
+ + DV+SFGV+ E+ D S S+ FL E D
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFTYC---DKSCSPSAEFLRMMGCERDVPALCRLLELL 241
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQI 397
RLPAP E + E++ C SP+ RP+ + QL +
Sbjct: 242 EEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQLDM 284
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG 296
VA + YL F VHRD++++N +LD F VADFG+A+ + D ++ +
Sbjct: 133 VARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDIL-DREYYSVQQHRHA 188
Query: 297 -----YVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSIS-SSFLNTDIELD 349
+ A E T + T K DV+SFGVL E++ +G P + + FL
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ----- 243
Query: 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIV 391
RLP P S+ +V+ C P RPT +++
Sbjct: 244 ---GRRLPQPEYCPD----SLYQVMQQCWEADPAVRPTFRVL 278
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 117/276 (42%), Gaps = 34/276 (12%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAI-------KKFHSPLPSDQIVDKKEFLTEV 176
+F +G+G G+VY+ +P G+ V I ++ SP + KE L E
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN------KEILDEA 102
Query: 177 EALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG 236
+ + + ++ +L G C + L+ + + G +G +N
Sbjct: 103 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQ 159
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY- 295
+A ++YL +VHRD++++N+L+ + DFG+AK L + + G
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 296 -GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD 353
++A E T + DV+S+GV E++ G P D I +S +++ +E E
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE--- 270
Query: 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
RLP P + + ++ C +SRP +
Sbjct: 271 -RLPQPPICTID----VYMIMVKCWMIDADSRPKFR 301
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 148 SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHSFLVYE 205
+G++VA+K Q+ + + E+E L + H +IVK G C + LV E
Sbjct: 36 TGEMVAVKALKEGC-GPQL--RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 92
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
++ G +G +Q + + + + ++YLH + +HR ++++N+LLD
Sbjct: 93 YVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 145
Query: 266 LEFEAHVADFGIAKFLKPDSSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLA 321
+ + DFG+AK + P+ + + APE K DV+SFGV
Sbjct: 146 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTL 204
Query: 322 LEVI----KGKHPRDFLSSI--SSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEV 373
E++ + P + + + T + L E+L+ RLP P R E I +
Sbjct: 205 YELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCE----IYHL 260
Query: 374 VFSCLNESPESRPTMKIVSQQLQ 396
+ +C RPT + + LQ
Sbjct: 261 MKNCWETEASFRPTFQNLVPILQ 283
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 73
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 130
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 240
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 241 PQPPICTID----VYMIMVKCWMIDADSRPKFR 269
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 148 SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHSFLVYE 205
+G++VA+K Q+ + + E+E L + H +IVK G C + LV E
Sbjct: 37 TGEMVAVKALKEGC-GPQL--RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 93
Query: 206 FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265
++ G +G +Q + + + + ++YLH + +HR ++++N+LLD
Sbjct: 94 YVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 146
Query: 266 LEFEAHVADFGIAKFLKPDSSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLA 321
+ + DFG+AK + P+ + + APE K DV+SFGV
Sbjct: 147 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTL 205
Query: 322 LEVI----KGKHPRDFLSSI--SSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEV 373
E++ + P + + + T + L E+L+ RLP P R E I +
Sbjct: 206 YELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCE----IYHL 261
Query: 374 VFSCLNESPESRPTMKIVSQQLQ 396
+ +C RPT + + LQ
Sbjct: 262 MKNCWETEASFRPTFQNLVPILQ 284
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 75
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 132
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG AK L + + G +
Sbjct: 133 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 242
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 243 PQPPICTID----VYMIMVKCWMIDADSRPKFR 271
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 20/205 (9%)
Query: 133 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G GG Y E+ +G+VV P K++ TE+ + + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH------QKEKMSTEIAIHKSLDNPH 103
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM-NVIKGVADALSYLH 245
+V +GF ++V E +R E M I+GV YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYLH 159
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT 305
++ ++HRD+ NL L+ + + + DFG+A ++ D GT Y+APE+
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 306 MKITEKCDVYSFGVLALEVIKGKHP 330
+ + D++S G + ++ GK P
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 20/205 (9%)
Query: 133 IGNGGHGSVYR------AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G GG Y E+ +G+VV P K++ TE+ + + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH------QKEKMSTEIAIHKSLDNPH 103
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM-NVIKGVADALSYLH 245
+V +GF ++V E +R E M I+GV YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYLH 159
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT 305
++ ++HRD+ NL L+ + + + DFG+A ++ D GT Y+APE+
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 306 MKITEKCDVYSFGVLALEVIKGKHP 330
+ + D++S G + ++ GK P
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 78
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 135
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 245
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 246 PQPPICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 71
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 128
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 238
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 239 PQPPICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 15/213 (7%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEF---LTEVEA 178
++F+ +G G G V A + +G + A+K L D I+ + +TE
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV----LKKDVILQDDDVECTMTEKRI 76
Query: 179 LTEIR-HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGV 237
L+ R H + +L+ F V EF+ G E ++ +
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE---ARARFYAAEI 133
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGY 297
AL +LH I++RD+ N+LLD E +ADFG+ K + F GT Y
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+APE+ M D ++ GVL E++ G P
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F + +G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 78
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 135
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 245
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 246 PQPPICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 12/209 (5%)
Query: 126 DFDAQYCIGNG-GHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
D + Y + N G GS ++ + I++ +P + D F E+E + + H
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH 65
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
NI++LY +LV E G +E S ++K V A++Y
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVAYC 122
Query: 245 HHDCFPPIVHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
H + HRD+ +N L + + DFG+A KP T+ GT YV+P+
Sbjct: 123 HKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQ 178
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + E CD +S GV+ ++ G P
Sbjct: 179 VLEGLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 12/209 (5%)
Query: 126 DFDAQYCIGNG-GHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
D + Y + N G GS ++ + I++ +P + D F E+E + + H
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH 82
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
NI++LY +LV E G +E S ++K V A++Y
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVAYC 139
Query: 245 HHDCFPPIVHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
H + HRD+ +N L + + DFG+A KP T+ GT YV+P+
Sbjct: 140 HKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQ 195
Query: 302 LAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + E CD +S GV+ ++ G P
Sbjct: 196 VLEGLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 37/215 (17%)
Query: 134 GNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE--IRHRNIVKLY 191
G G V++A+L VA+K F PL DK+ + +E E + ++H N+++
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIF--PLQ-----DKQSWQSEREIFSTPGMKHENLLQF- 74
Query: 192 GFCSHARHS------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+ R S +L+ F +G + W++ +V + ++ LSYLH
Sbjct: 75 -IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLH 129
Query: 246 HDC--------FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTY 295
D P I HRD SKN+LL + A +ADFG+A +P GT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 296 GYVAPE-----LAYTMKITEKCDVYSFGVLALEVI 325
Y+APE + + + D+Y+ G++ E++
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G +GSV Y A L Q VA+KK P S ++ + E+ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVIG 91
Query: 190 LYGFCSHARHSFLVYE-FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L + A E +L Q L ++ + L Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MK 307
I+HRD+ N+ ++ + E + DFG+A + T + T Y APE+ M
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 308 ITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E+++GK
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 73
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 130
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 240
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 241 PQPPICTID----VYMIMRKCWMIDADSRPKFR 269
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G +G+V++A+ + ++VA+K+ L D L E+ L E++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQ-ELGWSQRMNVIKGVADALSYLHHDCFP 250
+ LV+EF + E+ S ++KG L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSR--- 120
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI-T 309
++HRD+ +NLL++ E +A+FG+A+ ++ T Y P++ + K+ +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 310 EKCDVYSFGVLALEVIKGKHP 330
D++S G + E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAGRP 201
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F + +G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 78
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 135
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 245
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 246 PQPPICTID----VYMIMVKCWMIDADSRPKFR 274
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F +G+G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 73
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 130
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 240
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 241 PQPPICTID----VYMIMRKCWMIDADSRPKFR 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 32/267 (11%)
Query: 133 IGNGGHGSVYRA-ELPSGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187
+G+G G+VY+ +P G+ VAIK KE L E + + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA---NKEILDEAYVMAGVGSPYV 81
Query: 188 VKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+L G C + LV + + G LG +N +A +SYL
Sbjct: 82 SRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRG--RLGSQDLLNWCMQIAKGMSYLED- 137
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYT 305
+VHRD++++N+L+ + DFG+A+ L D + + G ++A E
Sbjct: 138 --VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 306 MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP--RLPAPSRS 362
+ T + DV+S+GV E++ G P D + + E+ ++L+ RLP P
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---------REIPDLLEKGERLPQPPIC 246
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMK 389
+ + ++ C E RP +
Sbjct: 247 TID----VYMIMVKCWMIDSECRPRFR 269
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVV----AIKKFHSPLPSDQIVDKKEFLTEVEAL 179
+F + +G G+VY+ +P G+ V AIK+ KE L E +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA---NKEILDEAYVM 71
Query: 180 TEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVAD 239
+ + ++ +L G C + L+ + + G +G +N +A
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAK 128
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GY 297
++YL +VHRD++++N+L+ + DFG+AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356
+A E T + DV+S+GV E++ G P D I +S +++ +E E RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---GIPASEISSILEKGE----RL 238
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
P P + + ++ C +SRP +
Sbjct: 239 PQPPICTID----VYMIMVKCWMIDADSRPKFR 267
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G +GSV Y A L Q VA+KK P S ++ + E+ L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVIG 83
Query: 190 LYGFCSHARHSFLVYE-FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L + A E +L Q L ++ + L Y+H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS-- 141
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MK 307
I+HRD+ N+ ++ + E + DFG+A + T + T Y APE+ M
Sbjct: 142 -AGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 197
Query: 308 ITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E+++GK
Sbjct: 198 YNQTVDIWSVGCIMAELLQGK 218
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 165 QIVDK--KEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX 221
+++DK ++ E+E L +H NI+ L +H +LV E ++ G
Sbjct: 58 KVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF 117
Query: 222 XQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE----AHVADFGI 277
E + V+ + + YLH +VHRD+ N+L E + DFG
Sbjct: 118 FSE---REASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGF 171
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
AK L+ ++ T +VAPE+ E CD++S G+L ++ G P
Sbjct: 172 AKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
+G+G +GSV Y A L Q VA+KK P S ++ + E+ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVIG 91
Query: 190 LYGFCSHARHSFLVYE-FLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDC 248
L + A E +L Q L ++ + L Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MK 307
I+HRD+ N+ ++ + E + DFG+A + T + T Y APE+ M
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 308 ITEKCDVYSFGVLALEVIKGK 328
+ D++S G + E+++GK
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 38/251 (15%)
Query: 170 KEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------- 221
++ L+E L ++ H +++KLYG CS L+ E+ K G
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 222 -------------XQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF 268
+ L ++ ++ + YL +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGR 187
Query: 269 EAHVADFGIAKFLKPDSSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK 326
+ ++DFG+++ + + S G ++A E + T + DV+SFGVL E++
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 327 -GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
G +P I L ++ R+ P +E R ++ C + P+ R
Sbjct: 248 LGGNP---YPGIPPERLFNLLKTGH----RMERPDNCSEEMYR----LMLQCWKQEPDKR 296
Query: 386 PTMKIVSQQLQ 396
P +S+ L+
Sbjct: 297 PVFADISKDLE 307
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXX-------------XXXQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 165 QIVDK--KEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX 221
+++DK ++ E+E L +H NI+ L +H +LV E ++ G
Sbjct: 58 KVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF 117
Query: 222 XQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE----AHVADFGI 277
E + V+ + + YLH +VHRD+ N+L E + DFG
Sbjct: 118 FSE---REASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGF 171
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
AK L+ ++ T +VAPE+ E CD++S G+L ++ G P
Sbjct: 172 AKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 38/251 (15%)
Query: 170 KEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------- 221
++ L+E L ++ H +++KLYG CS L+ E+ K G
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 222 -------------XQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF 268
+ L ++ ++ + YL +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGR 187
Query: 269 EAHVADFGIAKFLKPDSSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK 326
+ ++DFG+++ + + S G ++A E + T + DV+SFGVL E++
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 327 -GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
G +P I L ++ R+ P +E R ++ C + P+ R
Sbjct: 248 LGGNP---YPGIPPERLFNLLKTGH----RMERPDNCSEEMYR----LMLQCWKQEPDKR 296
Query: 386 PTMKIVSQQLQ 396
P +S+ L+
Sbjct: 297 PVFADISKDLE 307
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXX-------------XXXQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 78
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG--Y 297
++YL+ F VHRD++++N ++ +F + DFG+ + + G +
Sbjct: 139 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEV 324
+APE T D++SFGV+ E+
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG--Y 297
++YL+ F VHRD++++N ++ +F + DFG+ + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEV 324
+APE T D++SFGV+ E+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG--Y 297
++YL+ F VHRD++++N ++ +F + DFG+ + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEV 324
+APE T D++SFGV+ E+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 40/268 (14%)
Query: 133 IGNGGHG-SVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG G G ++ G+ IK+ + S + +++E EV L ++H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK--EREESRREVAVLANMKHPNIVQYR 89
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA----DALSYLHHD 247
++V ++ + G +R+N KGV L +
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLF---------------KRINAQKGVLFQEDQILDWFVQI 134
Query: 248 CFP-------PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
C I+HRDI S+N+ L + + DFGIA+ L GT Y++P
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
E+ K D+++ G + E+ KH + + S N +++ + P S
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFE-----AGSMKNLVLKI---ISGSFPPVS 246
Query: 361 RSVQEKLRSIVEVVFSCLNESPESRPTM 388
LRS+V +F +P RP++
Sbjct: 247 LHYSYDLRSLVSQLF---KRNPRDRPSV 271
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
I++RD+ N++LD E +ADFG+ K D F GT Y+APE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 312 CDVYSFGVLALEVIKGKHP 330
D ++FGVL E++ G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 86
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXX-------------XXXQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 147 VSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLAR----DINNID 198
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 249
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 250 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V+R S + + KF +DQ++ KK E+ L RHRNI+ L+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK----EISILNIARHRNILHLHE 68
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH-HDCFPP 251
+++EF+ EL + ++ + V +AL +LH H+
Sbjct: 69 SFESMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---- 122
Query: 252 IVHRDISSKNLLLDLEFEA--HVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKIT 309
I H DI +N++ + + +FG A+ LKP N+ Y APE+ ++
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVS 181
Query: 310 EKCDVYSFGVLALEVIKGKHPRDFLS----SISSSFLNTDIELDE 350
D++S G L ++ G +P FL+ I + +N + DE
Sbjct: 182 TATDMWSLGTLVYVLLSGINP--FLAETNQQIIENIMNAEYTFDE 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 38/251 (15%)
Query: 170 KEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------- 221
++ L+E L ++ H +++KLYG CS L+ E+ K G
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 222 -------------XQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF 268
+ L ++ ++ + YL +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGR 187
Query: 269 EAHVADFGIAKFLKPDSSNWTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK 326
+ ++DFG+++ + + S G ++A E + T + DV+SFGVL E++
Sbjct: 188 KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 327 -GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
G +P I L ++ R+ P +E R ++ C + P+ R
Sbjct: 248 LGGNP---YPGIPPERLFNLLKTGH----RMERPDNCSEEMYR----LMLQCWKQEPDKR 296
Query: 386 PTMKIVSQQLQ 396
P +S+ L+
Sbjct: 297 PVFADISKDLE 307
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 91
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRG-------------XXXXXXXXXXXXQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 152 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 203
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
+ T ++APE + T + DV+SFGVL E+ G P +
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------ 257
Query: 343 NTDIELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 258 ---EELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
I++RD+ N++LD E +ADFG+ K D F GT Y+APE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 312 CDVYSFGVLALEVIKGKHP 330
D ++FGVL E++ G+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 40/221 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 145
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 206 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 257
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEV 324
+ T ++APE + T + DV+SFGVL E+
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRG-------------XXXXXXXXXXXXQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 59/296 (19%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIK----KFHSPLPSDQIVDKKEFLTEVEALTEI 182
+G G VY+ L Q VAIK K PL ++EF E +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL-------REEFRHEAMLRARL 69
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG------ 236
+H N+V L G + + +++ + G ++G + +K
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 237 -------VADALSYL--HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
+A + YL HH +VH+D++++N+L+ + ++D G+ F + +++
Sbjct: 130 FVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAAD 182
Query: 288 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
+ + G ++APE K + D++S+GV+ EV G P +
Sbjct: 183 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP-------YCGYS 235
Query: 343 NTDIELDEMLDPR--LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
N D+ EM+ R LP P + ++ C NE P RP K + +L+
Sbjct: 236 NQDVV--EMIRNRQVLPCPDDCPA----WVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 88
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRG-------------XXXXXXXXXXXXQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 149 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 200
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 251
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 252 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 48/291 (16%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK--PDSSN 287
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDI- 346
T ++APE + T + DV+SFGVL E+ + S + +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPGVPVE 259
Query: 347 ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 80
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT----Y 295
++YL+ F VHRD++++N ++ +F + DFG+ + + +++ G
Sbjct: 141 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 195
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEV 324
++APE T D++SFGV+ E+
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 131/306 (42%), Gaps = 56/306 (18%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTE--VEALTEIRHRNIVKL 190
IG G +G+VY+ L + VA+K F +++ F+ E + + + H NI +
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF-------SFANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 191 Y----GFCSHARHSFL-VYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+ R +L V E+ G W + V L+YLH
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLH 128
Query: 246 HDC------FPPIVHRDISSKNLLLDLEFEAHVADFGIA------KFLKP---DSSNWTE 290
+ P I HRD++S+N+L+ + ++DFG++ + ++P D++ +E
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 291 FAGTYGYVAPEL---AYTMKITE----KCDVYSFGVLALEVIKG-----------KHPRD 332
GT Y+APE+ A ++ E + D+Y+ G++ E+ ++
Sbjct: 189 -VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247
Query: 333 FLSSISSSFLNTDIEL---DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389
F + + + D+++ E P+ P + +RS+ E + C ++ E+R T +
Sbjct: 248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQ 307
Query: 390 IVSQQL 395
+++
Sbjct: 308 XAEERM 313
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 15/247 (6%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKE---FLTEVEALTE 181
+DF IG G G V A + +V K L I+ KKE ++E L +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKV---LQKKAILKKKEEKHIMSERNVLLK 94
Query: 182 -IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
++H +V L+ A + V +++ G E + +A A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE---PRARFYAAEIASA 151
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
L YLH IV+RD+ +N+LLD + + DFG+ K +S + F GT Y+AP
Sbjct: 152 LGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
Query: 301 ELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
E+ + D + G + E++ G P F S ++ + + L P + +
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPP--FYSRNTAEMYDNILNKPLQLKPNITNSA 266
Query: 361 RSVQEKL 367
R + E L
Sbjct: 267 RHLLEGL 273
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 59/296 (19%)
Query: 133 IGNGGHGSVYRAEL------PSGQVVAIK----KFHSPLPSDQIVDKKEFLTEVEALTEI 182
+G G VY+ L Q VAIK K PL ++EF E +
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL-------REEFRHEAMLRARL 86
Query: 183 RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG------ 236
+H N+V L G + + +++ + G ++G + +K
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 237 -------VADALSYL--HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
+A + YL HH +VH+D++++N+L+ + ++D G+ F + +++
Sbjct: 147 FVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAAD 199
Query: 288 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342
+ + G ++APE K + D++S+GV+ EV G P +
Sbjct: 200 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP-------YCGYS 252
Query: 343 NTDIELDEMLDPR--LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
N D+ EM+ R LP P + ++ C NE P RP K + +L+
Sbjct: 253 NQDVV--EMIRNRQVLPCPDDCPA----WVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 120/295 (40%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 55/303 (18%)
Query: 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNI 187
Q IG G G V+R + G+ VA+K F S +++ + E E + RH NI
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 62
Query: 188 VKLYGFCSHARHS-------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ GF + +LV ++ + G E + + A
Sbjct: 63 L---GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASG 115
Query: 241 LSYLHHDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------ 289
L++LH + P I HRD+ SKN+L+ +AD G+A ++ DS+ T
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 173
Query: 290 EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEV-----IKGKHP------RD 332
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 233
Query: 333 FLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392
+ S S + ++ L P +P +S E LR + +++ C + +R T +
Sbjct: 234 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 292
Query: 393 QQL 395
+ L
Sbjct: 293 KTL 295
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 55/303 (18%)
Query: 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNI 187
Q IG G G V+R + G+ VA+K F S +++ + E E + RH NI
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 65
Query: 188 VKLYGFCSHARHS-------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ GF + +LV ++ + G E + + A
Sbjct: 66 L---GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASG 118
Query: 241 LSYLHHDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------ 289
L++LH + P I HRD+ SKN+L+ +AD G+A ++ DS+ T
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 176
Query: 290 EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEV-----IKGKHP------RD 332
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 236
Query: 333 FLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392
+ S S + ++ L P +P +S E LR + +++ C + +R T +
Sbjct: 237 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 295
Query: 393 QQL 395
+ L
Sbjct: 296 KTL 298
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 53/300 (17%)
Query: 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEF-LTEVEALTEIR-HRN 186
++ +G G G+V G+ VA+K+ ++D + L E++ LTE H N
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRM--------LIDFCDIALMEIKLLTESDDHPN 70
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN---VIKGVADALSY 243
+++ Y + R ++ E + L + N +++ +A +++
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 244 LHHDCFPPIVHRDISSKNLLLDL--EFEAH-----------VADFGIAKFLKPDSS---- 286
LH I+HRD+ +N+L+ F A ++DFG+ K L S
Sbjct: 131 LHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 287 NWTEFAGTYGYVAPEL-------AYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSIS 338
N +GT G+ APEL ++T D++S G + ++ KGKHP S
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 339 SSFLNTDIELDEMLDPRLPAPSRSVQEK--LRSIVEVVFSCLNESPESRPT-MKIVSQQL 395
S+ + LDEM + + ++ + +++ ++ P RPT MK++ L
Sbjct: 248 SNIIRGIFSLDEM---------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 133
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXX-------------XXXQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 194 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 245
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 296
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 297 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT----Y 295
++YL+ F VHRD++++N ++ +F + DFG+ + + +++ G
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 196
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEV 324
++APE T D++SFGV+ E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 55/303 (18%)
Query: 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNI 187
Q IG G G V+R + G+ VA+K F S +++ + E E + RH NI
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 60
Query: 188 VKLYGFCSHARHS-------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ GF + +LV ++ + G E + + A
Sbjct: 61 L---GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASG 113
Query: 241 LSYLHHDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------ 289
L++LH + P I HRD+ SKN+L+ +AD G+A ++ DS+ T
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 171
Query: 290 EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEV-----IKGKHP------RD 332
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 231
Query: 333 FLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392
+ S S + ++ L P +P +S E LR + +++ C + +R T +
Sbjct: 232 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 290
Query: 393 QQL 395
+ L
Sbjct: 291 KTL 293
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 204
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 255
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 256 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 55/303 (18%)
Query: 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNI 187
Q IG G G V+R + G+ VA+K F S +++ + E E + RH NI
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 85
Query: 188 VKLYGFCSHARHS-------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ GF + +LV ++ + G E + + A
Sbjct: 86 L---GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASG 138
Query: 241 LSYLHHDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------ 289
L++LH + P I HRD+ SKN+L+ +AD G+A ++ DS+ T
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 196
Query: 290 EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEV-----IKGKHP------RD 332
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 256
Query: 333 FLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392
+ S S + ++ L P +P +S E LR + +++ C + +R T +
Sbjct: 257 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 315
Query: 393 QQL 395
+ L
Sbjct: 316 KTL 318
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 55/303 (18%)
Query: 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNI 187
Q IG G G V+R + G+ VA+K F S +++ + E E + RH NI
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 98
Query: 188 VKLYGFCSHARHS-------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ GF + +LV ++ + G E + + A
Sbjct: 99 L---GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASG 151
Query: 241 LSYLHHDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------ 289
L++LH + P I HRD+ SKN+L+ +AD G+A ++ DS+ T
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 209
Query: 290 EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEV-----IKGKHPR------D 332
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269
Query: 333 FLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392
+ S S + ++ L P +P +S E LR + +++ C + +R T +
Sbjct: 270 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 328
Query: 393 QQL 395
+ L
Sbjct: 329 KTL 331
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 204
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 255
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 256 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 55/303 (18%)
Query: 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNI 187
Q IG G G V+R + G+ VA+K F S +++ + E E + RH NI
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENI 59
Query: 188 VKLYGFCSHARHS-------FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
+ GF + +LV ++ + G E + + A
Sbjct: 60 L---GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASG 112
Query: 241 LSYLHHDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT------ 289
L++LH + P I HRD+ SKN+L+ +AD G+A ++ DS+ T
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 170
Query: 290 EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEV-----IKGKHP------RD 332
GT Y+APE+ + MK E + D+Y+ G++ E+ I G H D
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 333 FLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392
+ S S + ++ L P +P +S E LR + +++ C + +R T +
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIK 289
Query: 393 QQL 395
+ L
Sbjct: 290 KTL 292
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 77
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 138 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 189
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 240
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 241 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 77
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 78 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 131
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD+++ + + GT Y+ PE M
Sbjct: 132 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 241
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 242 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 268
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 81
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 142 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 193
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 244
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 245 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 84
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 145 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 196
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 247
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 248 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 204
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 255
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 256 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P+ VA+K S + D ++E+E + I +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 85
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX-------------XQELGWSQR 230
H+NI+ L G C+ +++ E+ +G ++L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ VA + YL C +HRD++++N+L+ + +ADFG+A+ D +
Sbjct: 146 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 197
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI---------FTLGGSPYPG 248
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ PS E + ++ C + P RPT K + + L
Sbjct: 249 VPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG--Y 297
++YL+ F VHRD++++N ++ +F + DFG+ + + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 298 VAPELAYTMKITEKCDVYSFGVLALEV 324
+APE T D++SFGV+ E+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G +V+R +G + AIK F++ + + VD + + E E L ++ H+NIVKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN-ISFLRPVDVQ--MREFEVLKKLNHKNIVKLF 73
Query: 192 GF--CSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ RH L+ EF G L S+ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 250 PPIVHRDISSKNLLL----DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA-- 303
IVHR+I N++ D + + DFG A+ L+ D + GT Y+ P++
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMYER 189
Query: 304 ------YTMKITEKCDVYSFGVLALEVIKGKHP 330
+ K D++S GV G P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 73
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 74 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 127
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD+++ + + GT Y+ PE M
Sbjct: 128 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 237
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 238 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 264
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 121
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 122 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 175
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD+++ + + GT Y+ PE M
Sbjct: 176 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 285
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 286 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 19/206 (9%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEA----LTEIRHRNI 187
+G G G V A + Q VA+K S Q++ K + VE L +RH +I
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALK-----FISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 188 VKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+KLY + +V E+ ++ G + + A+ Y H
Sbjct: 72 IKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG----RRFFQQIICAIEYCHRH 127
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-TM 306
IVHRD+ +NLLLD +ADFG++ + D + G+ Y APE+ +
Sbjct: 128 ---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKL 183
Query: 307 KITEKCDVYSFGVLALEVIKGKHPRD 332
+ DV+S G++ ++ G+ P D
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V A +GQ VA+K + + + + + E+ L +RH +I+KLY
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 80
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+V E+ ++ + + + A+ Y H
Sbjct: 81 DVIKSKDEIIMVIEY----AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 133
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
IVHRD+ +NLLLD +ADFG++ + D + G+ Y APE ++ +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 311 KCDVYSFGVLALEVIKGKHPRD 332
+ DV+S GV+ ++ + P D
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFD 214
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 93
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 94 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 147
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD+++ + + GT Y+ PE M
Sbjct: 148 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 257
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 258 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 284
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V A +GQ VA+K + + + + + E+ L +RH +I+KLY
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 70
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+V E+ ++ + + + A+ Y H
Sbjct: 71 DVIKSKDEIIMVIEY----AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 123
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
IVHRD+ +NLLLD +ADFG++ + D + G+ Y APE ++ +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 311 KCDVYSFGVLALEVIKGKHPRD 332
+ DV+S GV+ ++ + P D
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFD 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V A +GQ VA+K + + + + + E+ L +RH +I+KLY
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 79
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+V E+ ++ + + + A+ Y H
Sbjct: 80 DVIKSKDEIIMVIEY----AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 132
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
IVHRD+ +NLLLD +ADFG++ + D + G+ Y APE ++ +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 311 KCDVYSFGVLALEVIKGKHPRD 332
+ DV+S GV+ ++ + P D
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFD 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 173 LTEVEALTEIR-HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
L EV+ L ++ H NI++L FLV++ +K+G E + M
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
+ V AL L+ IVHRD+ +N+LLD + + DFG + L P E
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 170
Query: 292 AGTYGYVAPELAYTMK------ITEKCDVYSFGVLALEVIKGKHP 330
GT Y+APE+ ++ D++S GV+ ++ G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G +V+R +G + AIK F++ + + VD + + E E L ++ H+NIVKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN-ISFLRPVDVQ--MREFEVLKKLNHKNIVKLF 73
Query: 192 GF--CSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCF 249
+ RH L+ EF G L S+ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 250 PPIVHRDISSKNLLL----DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA-- 303
IVHR+I N++ D + + DFG A+ L+ D + GT Y+ P++
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDMYER 189
Query: 304 ------YTMKITEKCDVYSFGVLALEVIKGKHP 330
+ K D++S GV G P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V A +GQ VA+K + + + + + E+ L +RH +I+KLY
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 74
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
+V E+ ++ + + + A+ Y H
Sbjct: 75 DVIKSKDEIIMVIEY----AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 127
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 310
IVHRD+ +NLLLD +ADFG++ + D + G+ Y APE ++ +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 311 KCDVYSFGVLALEVIKGKHPRD 332
+ DV+S GV+ ++ + P D
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFD 208
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 74
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 75 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 128
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD+++ + + GT Y+ PE M
Sbjct: 129 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 238
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 239 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 265
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXX-------------XXXQELGWSQR 230
H+NI+ L G C+ +++ + +G +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 121
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 122 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 175
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD+++ + + GT Y+ PE M
Sbjct: 176 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 285
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 286 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 122/295 (41%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAEL-------PSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-R 183
+G G G V AE P V VA+K + D ++E+E + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 184 HRNIVKLYGFCSHARHSFLVY---------EFLKR----GXXXXXXXXXXXXQELGWSQR 230
H+NI+ L G C+ +++ E+L+ G +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 231 MNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
++ +A + YL C +HRD++++N+L+ +ADFG+A+ D +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 290 EFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343
+ T ++APE + T + DV+SFGVL E+ + S +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI---------FTLGGSPYPG 262
Query: 344 TDI-ELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
+ EL ++L R+ P+ E + ++ C + P RPT K + + L
Sbjct: 263 IPVEELFKLLKEGHRMDKPANCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 173 LTEVEALTEIR-HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
L EV+ L ++ H NI++L FLV++ +K+G E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
+ V AL L+ IVHRD+ +N+LLD + + DFG + L P E
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 292 AGTYGYVAPELAYTMK------ITEKCDVYSFGVLALEVIKGKHP 330
GT Y+APE+ ++ D++S GV+ ++ G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLL--DLEFEAHVADFGIAK-FLKPDSSNW 288
N+++ + AL YLH+ I HRDI +N L + FE + DFG++K F K ++ +
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 289 ---TEFAGTYGYVAPELAYTMKIT--EKCDVYSFGVLALEVIKGKHP 330
T AGT +VAPE+ T + KCD +S GVL ++ G P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 120/290 (41%), Gaps = 48/290 (16%)
Query: 126 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
DF IG+GG G V++A+ G+ IK+ + ++ EV+AL ++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK--------YNNEKAEREVKALAKLDH 63
Query: 185 RNIVKLYGFC-----------------SHARHSFLVYEFLKRGXXXXXXXXXXXXQELGW 227
NIV Y C S + F+ EF +G ++L
Sbjct: 64 VNIVH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDK 121
Query: 228 SQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287
+ + + + + Y+H +++RD+ N+ L + + DFG+ LK D
Sbjct: 122 VLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347
GT Y++PE + ++ D+Y+ G++ E++ H D ++ +S TD+
Sbjct: 179 -XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD--TAFETSKFFTDLR 232
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQI 397
D ++ +++ +KL L++ PE RP + + L +
Sbjct: 233 -DGIISDIFDKKEKTLLQKL----------LSKKPEDRPNTSEILRTLTV 271
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 57/302 (18%)
Query: 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEF-LTEVEALTEIR-HRN 186
++ +G G G+V G+ VA+K+ ++D + L E++ LTE H N
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRM--------LIDFCDIALMEIKLLTESDDHPN 70
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN---VIKGVADALSY 243
+++ Y + R ++ E + L + N +++ +A +++
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 244 LHHDCFPPIVHRDISSKNLLLDL--EFEAH-----------VADFGIAKFLKPDS----- 285
LH I+HRD+ +N+L+ F A ++DFG+ K K DS
Sbjct: 131 LHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXF 185
Query: 286 -SNWTEFAGTYGYVAPEL-------AYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLSS 336
N +GT G+ APEL ++T D++S G + ++ KGKHP S
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 337 ISSSFLNTDIELDEMLDPRLPAPSRSVQEK--LRSIVEVVFSCLNESPESRPT-MKIVSQ 393
S+ + LDEM + + ++ + +++ ++ P RPT MK++
Sbjct: 246 RESNIIRGIFSLDEM---------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296
Query: 394 QL 395
L
Sbjct: 297 PL 298
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 42/286 (14%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G GG V E L G A+K+ L +Q D++E E + H NI++L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQ-QDREEAQREADMHRLFNHPNILRLV 92
Query: 192 GFCSHAR----HSFLVYEFLKRGXXXXXXXXXXXXQE-LGWSQRMNVIKGVADALSYLHH 246
+C R ++L+ F KRG L Q + ++ G+ L +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 247 DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSS-------NWTEFAGTYGY 297
+ HRD+ N+LL E + + D G + + S +W T Y
Sbjct: 153 KGY---AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 298 VAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHPRDFL----SSISSSFLNTDIELDE 350
APEL I E+ DV+S G + ++ G+ P D + S++ + N +
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN------Q 263
Query: 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
+ P+ P S ++ + L S++ V P RP + ++ QL+
Sbjct: 264 LSIPQSPRHSSALWQLLNSMMTV-------DPHQRPHIPLLLSQLE 302
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 52/291 (17%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 91
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG---VADAL 241
N+V L G C+ +V EF K G S+R + D L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKDLYKDFL 141
Query: 242 SYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSS 286
+ H C+ +HRD++++N+LL + + DFG+A+ + PD
Sbjct: 142 TLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 201
Query: 287 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDI 346
+ ++APE + T + DV+SFGVL E+ L + + D
Sbjct: 202 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDE 254
Query: 347 ELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E L R+ AP + E +++++ C + P RPT + + L
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 301
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 165 QIVDK--KEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX 221
+I+DK ++ E+E L +H NI+ L ++ ++V E +K G
Sbjct: 53 KIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF 112
Query: 222 XQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF----EAHVADFGI 277
E + V+ + + YLH +VHRD+ N+L E + DFG
Sbjct: 113 FSE---REASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
AK L+ ++ T +VAPE+ CD++S GVL ++ G P
Sbjct: 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT----Y 295
++YL+ F VHR+++++N ++ +F + DFG+ + + +++ G
Sbjct: 142 GMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 196
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEV 324
++APE T D++SFGV+ E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG 296
+ L +LH I++RD+ +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 133 IGNGGHGSVYRA---ELPSGQV---VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186
+G G G VY ++ G+ VA+K + S + ++ EFL E + +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 82
Query: 187 IVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG-------WSQRMNVIKGVAD 239
+V+L G S + + +V E + G E + + + +AD
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT----Y 295
++YL+ F VHR+++++N ++ +F + DFG+ + + +++ G
Sbjct: 143 GMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 296 GYVAPELAYTMKITEKCDVYSFGVLALEV 324
++APE T D++SFGV+ E+
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG 296
+ L +LH I++RD+ +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG 296
+ L +LH I++RD+ +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG 296
+ L +LH I++RD+ +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G +G VY S QV +AIK+ +P + E+ ++H+NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXX-----XXXQELGWSQRMNVIKGVADALSYLHH 246
G S + E + G Q +G+ K + + L YLH
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLHD 140
Query: 247 DCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL--A 303
+ IVHRDI N+L++ ++DFG +K L + F GT Y+APE+
Sbjct: 141 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
+ D++S G +E+ GK P
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 104/260 (40%), Gaps = 28/260 (10%)
Query: 118 DEIVRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEV 176
+E+ AT+ Q +G G G V+R E +G A+KK V + E L
Sbjct: 90 EEVHWATH----QLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLE------VFRAEELMAC 139
Query: 177 EALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG 236
LT R IV LYG + E L+ G E + + +
Sbjct: 140 AGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQ 193
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGIAKFLKPDSSNWTEFAGTY 295
+ L YLH I+H D+ + N+LL + A + DFG A L+PD + G Y
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 296 -----GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD--FLSSISSSFLNTDIEL 348
++APE+ K DV+S + L ++ G HP F + + +
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPV 310
Query: 349 DEMLDPRLPAPSRSVQEKLR 368
E+ P ++++QE LR
Sbjct: 311 REIPPSCAPLTAQAIQEGLR 330
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Query: 152 VAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFL--- 207
VA+K S + ++ ++E++ +T++ H NIV L G C+ + +L++E+
Sbjct: 78 VAVKMLKEKADSSE---REALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 208 --------KRGXXXXXXXXXXXXQELGWSQRMNVIK---------GVADALSYLHHDCFP 250
KR + L + +NV+ VA + +L F
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FK 191
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY--GYVAPELAYTMKI 308
VHRD++++N+L+ + DFG+A+ + DS+ ++APE +
Sbjct: 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY 251
Query: 309 TEKCDVYSFGVLALEVIK-GKHP 330
T K DV+S+G+L E+ G +P
Sbjct: 252 TIKSDVWSYGILLWEIFSLGVNP 274
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 27/153 (17%)
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD++++N+LL + DFG+A+ + PD + ++APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 311 KCDVYSFGVLALEVIK-GKHP-------RDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362
K DV+S+GVL E+ G P DF S + R+ AP S
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGM-------------RMRAPEYS 327
Query: 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
E I +++ C + P+ RP + ++L
Sbjct: 328 TPE----IYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L EIRH NI+ L+ + L+ E + G + L
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG---ELFDFLAEKESLT 127
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + D + YLH I H D+ +N +LLD + DFGIA ++
Sbjct: 128 EDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 185 A-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L EIRH NI+ L+ + L+ E + G E
Sbjct: 50 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 109
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+Q +K + D + YLH I H D+ +N +LLD + DFGIA ++
Sbjct: 110 ATQ---FLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 A-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 43/288 (14%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 92
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
N+V L G C+ +V EF K G + + + ++ K D L+
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKTPEDLYK---DFLTLE 148
Query: 245 HHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAKFL--KPDSSNWT 289
H C+ +HRD++++N+LL + + DFG+A+ + PD
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
+ ++APE + T + DV+SFGVL E+ L + + D E
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFC 261
Query: 350 EMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
L R+ AP + E + + + C + P RPT + + L
Sbjct: 262 RRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 30/262 (11%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G +G VY S QV +AIK+ +P + E+ ++H+NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXX-----XXXQELGWSQRMNVIKGVADALSYLHH 246
G S + E + G Q +G+ K + + L YLH
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLHD 126
Query: 247 DCFPPIVHRDISSKNLLLDLEFEA-HVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL--A 303
+ IVHRDI N+L++ ++DFG +K L + F GT Y+APE+
Sbjct: 127 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 183
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
+ D++S G +E+ GK P L ++ + + P +P S S
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM---FKVHPEIPE-SMSA 239
Query: 364 QEKLRSIVEVVFSCLNESPESR 385
+ K + C P+ R
Sbjct: 240 EAK-----AFILKCFEPDPDKR 256
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L EIRH NI+ L+ + L+ E + G + L
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG---ELFDFLAEKESLT 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + D + YLH I H D+ +N +LLD + DFGIA ++
Sbjct: 114 EDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 A-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD++++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 311 KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLR 368
+ DV+SFGVL E+ L + + D E L R+ AP + E
Sbjct: 226 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPE--- 275
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQL 395
+ + + C + P RPT + + L
Sbjct: 276 -MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 121
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 122 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 175
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD+++ + + G Y+ PE M
Sbjct: 176 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 285
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 286 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 91
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 141
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAK--FLK 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 254
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 128
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 178
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAK--FLK 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 239 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 291
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 292 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 36/269 (13%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKL 190
IG+GG V++ Q+ AIK + +Q +D + E+ L +++ + I++L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD--SYRNEIAYLNKLQQHSDKIIRL 93
Query: 191 YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFP 250
Y + ++ ++V E G W +R + K + +A+ +H
Sbjct: 94 YDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG-- 147
Query: 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA--GTYGYVAPELAYTMKI 308
IVH D+ N L+ ++ + DFGIA ++PD + + GT Y+ PE M
Sbjct: 148 -IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 309 TEK-----------CDVYSFGVLALEVIKGKHP-RDFLSSISSSFLNTDIELDEMLDPRL 356
+ + DV+S G + + GK P + ++ IS +L ++DP
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KLHAIIDPNH 257
Query: 357 PAPSRSVQEKLRSIVEVVFSCLNESPESR 385
+ EK + +V+ CL P+ R
Sbjct: 258 EIEFPDIPEK--DLQDVLKCCLKRDPKQR 284
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 82
Query: 186 NIVKLYGFCSHARHSFLVY-EFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 132
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAK--FLK 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 245
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 121/303 (39%), Gaps = 61/303 (20%)
Query: 126 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH 184
DF IG+GG G V++A+ G+ I++ + ++ EV+AL ++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK--------YNNEKAEREVKALAKLDH 64
Query: 185 RNIVKLYGFC------------------------------SHARHSFLVYEFLKRGXXXX 214
NIV Y C S + F+ EF +G
Sbjct: 65 VNIVH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 215 XXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVAD 274
++L + + + + + Y+H ++HRD+ N+ L + + D
Sbjct: 124 WIEKRRG-EKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 275 FGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFL 334
FG+ LK D T GT Y++PE + ++ D+Y+ G++ E++ H D
Sbjct: 180 FGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD-- 233
Query: 335 SSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394
++ +S TD+ D ++ +++ +KL L++ PE RP + +
Sbjct: 234 TAFETSKFFTDLR-DGIISDIFDKKEKTLLQKL----------LSKKPEDRPNTSEILRT 282
Query: 395 LQI 397
L +
Sbjct: 283 LTV 285
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 42/288 (14%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 93
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
N+V L G C+ +V EF K G ++ K D L+
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK---DFLTLE 150
Query: 245 HHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSSNWT 289
H C+ +HRD++++N+LL + + DFG+A+ + PD
Sbjct: 151 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349
+ ++APE + T + DV+SFGVL E+ L + + D E
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFC 263
Query: 350 EMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
L R+ AP + E + + + C + P RPT + + L
Sbjct: 264 RRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 82
Query: 186 NIVKLYGFCSHARHSFLVY-EFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 132
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAK--FLK 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 245
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 28/260 (10%)
Query: 118 DEIVRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEV 176
+E+ AT+ Q +G G G V+R E +G A+KK V + E L
Sbjct: 71 EEVHWATH----QLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLE------VFRAEELMAC 120
Query: 177 EALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG 236
LT R IV LYG + E L+ G E + + +
Sbjct: 121 AGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQ 174
Query: 237 VADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGIAKFLKPDSSNWTEFAGTY 295
+ L YLH I+H D+ + N+LL + A + DFG A L+PD G Y
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 296 -----GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD--FLSSISSSFLNTDIEL 348
++APE+ K DV+S + L ++ G HP F + + +
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPV 291
Query: 349 DEMLDPRLPAPSRSVQEKLR 368
E+ P ++++QE LR
Sbjct: 292 REIPPSCAPLTAQAIQEGLR 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 91
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 141
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAK--FLK 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 202 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 254
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 173 LTEVEALTEIR-HRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
L EV+ L ++ H NI++L FLV++ +K+G E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291
+ V AL L+ IVHRD+ +N+LLD + + DFG + L P
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSV 183
Query: 292 AGTYGYVAPELAYTMK------ITEKCDVYSFGVLALEVIKGKHP 330
GT Y+APE+ ++ D++S GV+ ++ G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD++++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 311 KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLR 368
+ DV+SFGVL E+ L + + D E L R+ AP + E
Sbjct: 282 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 331
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQL 395
+ + + C + P RPT + + L
Sbjct: 332 -MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD++++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 311 KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLR 368
+ DV+SFGVL E+ L + + D E L R+ AP + E
Sbjct: 273 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 322
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQL 395
+ + + C + P RPT + + L
Sbjct: 323 -MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 21/230 (9%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
+G G G V++ E + +K + + + DK+E E+ + ++ H N+++LY
Sbjct: 97 LGGGRFGQVHKCEETA---TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 193 FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPI 252
LV E++ G L + +K + + + ++H I
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESY--NLTELDTILFMKQICEGIRHMHQ---MYI 208
Query: 253 VHRDISSKNLLL---DLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKIT 309
+H D+ +N+L D + + + DFG+A+ KP F GT ++APE+ ++
Sbjct: 209 LHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVS 266
Query: 310 EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT------DIELDEMLD 353
D++S GV+A ++ G P FL + LN D+E +E D
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSP--FLGDNDAETLNNILACRWDLEDEEFQD 314
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD++++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 311 KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLR 368
+ DV+SFGVL E+ L + + D E L R+ AP + E
Sbjct: 275 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 324
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQL 395
+ + + C + P RPT + + L
Sbjct: 325 -MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD++++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 311 KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLR 368
+ DV+SFGVL E+ L + + D E L R+ AP + E
Sbjct: 280 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 329
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQL 395
+ + + C + P RPT + + L
Sbjct: 330 -MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K + WT GT Y+A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLA 227
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
IV+RD+ +N+LLD ++D G+A + P+ GT GY+APE+ + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 312 CDVYSFGVLALEVIKGKHP 330
D ++ G L E+I G+ P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
IV+RD+ +N+LLD ++D G+A + P+ GT GY+APE+ + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 312 CDVYSFGVLALEVIKGKHP 330
D ++ G L E+I G+ P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 31/248 (12%)
Query: 97 RSNQNPHGLFSILNFEGKLVYDEIVRA-------TNDFDAQYCIGNGGHGSVYRAELPSG 149
R N+N I NF + Y++IV+ D+D IG G G V +
Sbjct: 48 RKNKN------IDNFLNR--YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKAS 99
Query: 150 QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209
Q V K S + D F E + + +V+L+ ++ ++V E++
Sbjct: 100 QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPG 159
Query: 210 GXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE 269
G ++ W++ V AL +H ++HRD+ N+LLD
Sbjct: 160 GDLVNLMSNYDVPEK--WAKFYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGH 212
Query: 270 AHVADFGIAKFLKPDSSNWTE---FAGTYGYVAPELAYTMK----ITEKCDVYSFGVLAL 322
+ADFG +K D + GT Y++PE+ + +CD +S GV
Sbjct: 213 LKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 270
Query: 323 EVIKGKHP 330
E++ G P
Sbjct: 271 EMLVGDTP 278
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 82
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 132
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAKFLK-- 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 245
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 82
Query: 186 NIVKLYGFCSHARHSFLVY-EFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 132
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAKFLK-- 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 245
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 133 IGNGGHGSVYRAE------LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHR 185
+G G G V A+ + + VA+K + + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HRALMSELKILIHIGHHL 91
Query: 186 NIVKLYGFCSHARHSFLV-YEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK-GVA----- 238
N+V L G C+ +V EF K G S+R + VA
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLY 141
Query: 239 -DALSYLHHDCFP-------------PIVHRDISSKNLLLDLEFEAHVADFGIAKFL--K 282
D L+ H C+ +HRD++++N+LL + + DFG+A+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342
PD + ++APE + T + DV+SFGVL E+ L + +
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGV 254
Query: 343 NTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395
D E L R+ AP + E + + + C + P RPT + + L
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 15/213 (7%)
Query: 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR 185
DF+ IG G G V +L + V K + + + F E + L +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXX--QELGWSQRMNVIKGVADALSY 243
I L+ + +LV ++ G +E+ ++ + D++
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DSVHQ 193
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-GTYGYVAPEL 302
LH+ VHRDI N+L+D+ +ADFG L D + + A GT Y++PE+
Sbjct: 194 LHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 303 AYTM-----KITEKCDVYSFGVLALEVIKGKHP 330
M + +CD +S GV E++ G+ P
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 165 QIVDK--KEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXX 221
+I+DK ++ E+E L +H NI+ L ++ ++V E K G
Sbjct: 53 KIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF 112
Query: 222 XQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF----EAHVADFGI 277
E + V+ + + YLH +VHRD+ N+L E + DFG
Sbjct: 113 FSE---REASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
AK L+ ++ T +VAPE+ CD++S GVL + G P
Sbjct: 167 AKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 253 VHRDISSKNLLLDLEFEAHVADFGIAKFL--KPDSSNWTEFAGTYGYVAPELAYTMKITE 310
+HRD++++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 311 KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLR 368
+ DV+SFGVL E+ L + + D E L R+ AP + E
Sbjct: 230 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 279
Query: 369 SIVEVVFSCLNESPESRPTMKIVSQQL 395
+ + + C + P RPT + + L
Sbjct: 280 -MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-GTYGY 297
D++ LH+ VHRDI N+LLD+ +ADFG + D + + A GT Y
Sbjct: 205 DSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 298 VAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHP 330
++PE+ M K +CD +S GV E++ G+ P
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-GTYGY 297
D++ LH+ VHRDI N+LLD+ +ADFG + D + + A GT Y
Sbjct: 189 DSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 298 VAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHP 330
++PE+ M K +CD +S GV E++ G+ P
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K WT GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K WT GT Y+A
Sbjct: 139 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLA 192
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L ++ H N++ L+ + L+ E + G + L
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLS 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A ++
Sbjct: 114 EEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP------RDFLSS 336
D + GT +VAPE+ + + D++S GV+ ++ G P ++ L++
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 337 ISSSFLNTDIEL 348
I+S + D E
Sbjct: 230 ITSVSYDFDEEF 241
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W AGT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLVGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S GV+ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLVGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S GV+ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L ++ H N++ L+ + L+ E + G + L
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLS 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A ++
Sbjct: 114 EEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP------RDFLSS 336
D + GT +VAPE+ + + D++S GV+ ++ G P ++ L++
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 337 ISSSFLNTDIEL 348
I+S + D E
Sbjct: 230 ITSVSYDFDEEF 241
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L ++ H N++ L+ + L+ E + G + L
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLS 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A ++
Sbjct: 114 EEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 118 DEIVRATNDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKF-----HSPLPSDQIVDKK 170
D + RA ++ IG G +G V++A G+ VA+K+ +P I +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-- 61
Query: 171 EFLTEVEALTEIRHRNIVKLYGFCSHARHS-----FLVYEFLKRGXXXXXXXXXX--XXQ 223
+ + L H N+V+L+ C+ +R LV+E + +
Sbjct: 62 --VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 224 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283
E +++G L +LH +VHRD+ +N+L+ + +ADFG+A+
Sbjct: 120 ETIKDMMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328
+ T T Y APE+ D++S G + E+ + K
Sbjct: 173 QMA-LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L ++ H N++ L+ + L+ E + G + L
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLS 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A ++
Sbjct: 114 EEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP------RDFLSS 336
D + GT +VAPE+ + + D++S GV+ ++ G P ++ L++
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 337 ISSSFLNTDIEL 348
I+S + D E
Sbjct: 230 ITSVSYDFDEEF 241
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L ++ H N++ L+ + L+ E + G + L
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLS 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A ++
Sbjct: 114 EEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 13/239 (5%)
Query: 97 RSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK 156
R N+N S + D ++A D++ IG G G V S + V K
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKA-EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 105
Query: 157 FHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXX 216
S + D F E + + +V+L+ R+ ++V E++ G
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM 165
Query: 217 XXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276
++ W++ V AL +H F +HRD+ N+LLD +ADFG
Sbjct: 166 SNYDVPEK--WARFYTA--EVVLALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFG 218
Query: 277 IAKFLKPDSSNWTEFA-GTYGYVAPELAYTM----KITEKCDVYSFGVLALEVIKGKHP 330
+ + + A GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 219 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 118 DEIVRATNDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKFH-----SPLPSDQIVDKK 170
D + RA ++ IG G +G V++A G+ VA+K+ +P I +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-- 61
Query: 171 EFLTEVEALTEIRHRNIVKLYGFCSHARHS-----FLVYEFLKRGXXXXXXXXXX--XXQ 223
+ + L H N+V+L+ C+ +R LV+E + +
Sbjct: 62 --VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 224 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283
E +++G L +LH +VHRD+ +N+L+ + +ADFG+A+
Sbjct: 120 ETIKDMMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328
+ T T Y APE+ D++S G + E+ + K
Sbjct: 173 QMA-LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 118 DEIVRATNDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKFH-----SPLPSDQIVDKK 170
D + RA ++ IG G +G V++A G+ VA+K+ +P I +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-- 61
Query: 171 EFLTEVEALTEIRHRNIVKLYGFCSHARHS-----FLVYEFLKRGXXXXXXXXXX--XXQ 223
+ + L H N+V+L+ C+ +R LV+E + +
Sbjct: 62 --VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 224 ELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283
E +++G L +LH +VHRD+ +N+L+ + +ADFG+A+
Sbjct: 120 ETIKDMMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328
+ T T Y APE+ D++S G + E+ + K
Sbjct: 173 QMA-LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG+G G V A + G VA+KK P +Q K+ + E+ L + H+NI+ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAY-RELVLLKCVNHKNIISLL 87
Query: 192 GFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+ + +LV E + EL + ++ + + +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLH 141
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELA 303
I+HRD+ N+++ + + DFG+A+ S+N+ T + T Y APE+
Sbjct: 142 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVI 195
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E++KG
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G +G VY+A + + + VAIK+ L ++ + EV L E++HRNI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIR--LEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH-HDCFP 250
H L++E+ + + S +I GV ++ H C
Sbjct: 100 SVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGV----NFCHSRRC-- 153
Query: 251 PIVHRDISSKNLLLDLEFEAH-----VADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAY 304
+HRD+ +NLLL + + + DFG+A+ +T T Y PE L
Sbjct: 154 --LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 305 TMKITEKCDVYSFGVLALEVI 325
+ + D++S + E++
Sbjct: 212 SRHYSTSVDIWSIACIWAEML 232
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + VADFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 120/303 (39%), Gaps = 61/303 (20%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G +G V+ + G+ VA+K F + + + TE+ +RH NI+ G
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE-----TEIYQTVLMRHENIL---G 95
Query: 193 FCS-------HARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
F + +L+ ++ + G L + + L +LH
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLH 151
Query: 246 HDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIA-KFLKPDSSNWTEF-----AGT 294
+ F P I HRD+ SKN+L+ +AD G+A KF+ +N + GT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI--SDTNEVDIPPNTRVGT 209
Query: 295 YGYVAPEL-----------AYTMKITEKCDVYSFGVLALEVIKG----------KHP-RD 332
Y+ PE+ +Y M D+YSFG++ EV + + P D
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIM-----ADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264
Query: 333 FLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392
+ S S +I + L P P S E LR + +++ C +P SR T V
Sbjct: 265 LVPSDPSYEDMREIVCIKKLRPSFPN-RWSSDECLRQMGKLMTECWAHNPASRLTALRVK 323
Query: 393 QQL 395
+ L
Sbjct: 324 KTL 326
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 13/239 (5%)
Query: 97 RSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK 156
R N+N S + D ++A D++ IG G G V S + V K
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKA-EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 105
Query: 157 FHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXX 216
S + D F E + + +V+L+ R+ ++V E++ G
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM 165
Query: 217 XXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276
++ W++ V AL +H F +HRD+ N+LLD +ADFG
Sbjct: 166 SNYDVPEK--WARFYTA--EVVLALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFG 218
Query: 277 IAKFLKPDSSNWTEFA-GTYGYVAPELAYTM----KITEKCDVYSFGVLALEVIKGKHP 330
+ + + A GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 219 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 13/239 (5%)
Query: 97 RSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKK 156
R N+N S + D ++A D++ IG G G V S + V K
Sbjct: 42 RKNKNIDNFLSRYKDTINKIRDLRMKA-EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 100
Query: 157 FHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXX 216
S + D F E + + +V+L+ R+ ++V E++ G
Sbjct: 101 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM 160
Query: 217 XXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276
++ W++ V AL +H F +HRD+ N+LLD +ADFG
Sbjct: 161 SNYDVPEK--WARFYTA--EVVLALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFG 213
Query: 277 IAKFLKPDSSNWTEFA-GTYGYVAPELAYTM----KITEKCDVYSFGVLALEVIKGKHP 330
+ + + A GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 214 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 32/235 (13%)
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
F ++++ H+++V YG C + LV EF+K G + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE--------AHVADFGIAKFLKP 283
V K +A A+ +L + ++H ++ +KN+LL E + ++D GI+ + P
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 284 DSSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSF 341
+V PE K + D +SFG E+ G P L S
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
Query: 342 LNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D +LPAP K + ++ +C++ P+ RP+ + + + L
Sbjct: 230 FYEDRH-------QLPAP------KAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 83/204 (40%), Gaps = 15/204 (7%)
Query: 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192
IG G +VY+ L + V + +++ F E E L ++H NIV+ Y
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 193 FCSHA----RHSFLVYEFLKRGXXXXXXXXXXXXQ-ELGWSQRMNVIKGVADALSYLHHD 247
+ LV E G + ++ S ++KG L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKG----LQFLHTR 148
Query: 248 CFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM 306
PPI+HRD+ N+ + + D G+A + +S GT + APE Y
Sbjct: 149 T-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFXAPE-XYEE 204
Query: 307 KITEKCDVYSFGVLALEVIKGKHP 330
K E DVY+FG LE ++P
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 41/278 (14%)
Query: 74 LVSMTLVAIFILRKRNSDSGDRQRSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCI 133
V+ LV R N++S ++N +F L + + VY + +R +++ +
Sbjct: 86 FVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTL 143
Query: 134 GNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL--------------TEVEA 178
G+G G V A E + + VAI+ I+ K++F TE+E
Sbjct: 144 GSGACGEVKLAFERKTCKKVAIR----------IISKRKFAIGSAREADPALNVETEIEI 193
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
L ++ H I+K+ F A ++V E ++ G +E + ++ + +
Sbjct: 194 LKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL 250
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGIAKFLKPDSSNWTEFAGTY 295
A+ YLH + I+HRD+ +N+LL + E + DFG +K L ++S GT
Sbjct: 251 -AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 305
Query: 296 GYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHP 330
Y+APE+ T D +S GV+ + G P
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKK------EFLTEVEALTEIR-H 184
+G G + V A L +G+ A+K I++K+ EVE L + + +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVK----------IIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
+NI++L F +LV+E L+ G E + V++ VA AL +L
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNE---REASRVVRDVAAALDFL 127
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFEA---HVADFGIAKFLKPDSS-------NWTEFAGT 294
H I HRD+ +N+L + + + DF + +K ++S T G+
Sbjct: 128 HTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 295 YGYVAPELA--YTMKIT---EKCDVYSFGVLALEVIKGKHP 330
Y+APE+ +T + T ++CD++S GV+ ++ G P
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLXGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK 328
M E D++S G + E+++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 41/278 (14%)
Query: 74 LVSMTLVAIFILRKRNSDSGDRQRSNQNPHGLFSILNFEGKLVYDEIVRATNDFDAQYCI 133
V+ LV R N++S ++N +F L + + VY + +R +++ +
Sbjct: 100 FVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTL 157
Query: 134 GNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL--------------TEVEA 178
G+G G V A E + + VAI+ I+ K++F TE+E
Sbjct: 158 GSGACGEVKLAFERKTCKKVAIR----------IISKRKFAIGSAREADPALNVETEIEI 207
Query: 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
L ++ H I+K+ F A ++V E ++ G +E + ++ + +
Sbjct: 208 LKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQMLL 264
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGIAKFLKPDSSNWTEFAGTY 295
A+ YLH + I+HRD+ +N+LL + E + DFG +K L ++S GT
Sbjct: 265 -AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 319
Query: 296 GYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHP 330
Y+APE+ T D +S GV+ + G P
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 29/279 (10%)
Query: 119 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKE---FLT 174
E+ +DF+ IG G V ++ +GQV A+K + ++ + E F
Sbjct: 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW----DMLKRGEVSCFRE 110
Query: 175 EVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
E + L R I +L+ + +LV E+ G + + +
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYL 168
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFA-G 293
+ A+ +H + VHRDI N+LLD +ADFG L+ D + + A G
Sbjct: 169 AEIVMAIDSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 294 TYGYVAPELAYTMKITE-------KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDI 346
T Y++PE+ + +CD ++ GV A E+ G+ P F + ++ +
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP--FYADSTAETYGKIV 283
Query: 347 ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385
E L LP V E+ R ++ + PE+R
Sbjct: 284 HYKEHLS--LPLVDEGVPEEARDFIQRLLC----PPETR 316
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 227
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
ND + +G+G G V++ +G V+A+K+ S + K L +++ + +
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSH 81
Query: 184 H-RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE--LGWSQRMNVIKGVADA 240
IV+ +G F+ E + E LG +M V + A
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG---KMTV--AIVKA 136
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAP 300
L YL ++HRD+ N+LLD + + DFGI+ L D + AG Y+AP
Sbjct: 137 LYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCAAYMAP 193
Query: 301 ELAYTMKITE-----KCDVYSFGVLALEVIKGKHP 330
E T+ + DV+S G+ +E+ G+ P
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 148 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 201
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 311
+++RD+ +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 312 CDVYSFGVLALEVIKGKHP 330
D ++ GVL E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 32/235 (13%)
Query: 172 FLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRM 231
F ++++ H+++V YG C + LV EF+K G + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 232 NVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE--------AHVADFGIAKFLKP 283
V K +A A+ +L + ++H ++ +KN+LL E + ++D GI+ + P
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 284 DSSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSF 341
+V PE K + D +SFG E+ G P L S
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
Query: 342 LNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396
D +LPAP K + ++ +C++ P+ RP+ + + + L
Sbjct: 230 FYEDRH-------QLPAP------KAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLVGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V ++E EV L ++ H NI+ L+ + L+ E + G + L
Sbjct: 57 VCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLS 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ + IK + D ++YLH I H D+ +N +LLD + DFG+A ++
Sbjct: 114 EEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG+AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 199
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 199
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL- 173
VY + +R +++ +G+G G V A E + + VAIK I+ K++F
Sbjct: 9 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 56
Query: 174 -------------TEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXX 220
TE+E L ++ H I+K+ F A ++V E ++ G
Sbjct: 57 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 115
Query: 221 XXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGI 277
+E + ++ + + A+ YLH + I+HRD+ +N+LL + E + DFG
Sbjct: 116 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 169
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHP 330
+K L ++S GT Y+APE+ T D +S GV+ + G P
Sbjct: 170 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL- 173
VY + +R +++ +G+G G V A E + + VAIK I+ K++F
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 50
Query: 174 -------------TEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXX 220
TE+E L ++ H I+K+ F A ++V E ++ G
Sbjct: 51 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 109
Query: 221 XXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGI 277
+E + ++ + + A+ YLH + I+HRD+ +N+LL + E + DFG
Sbjct: 110 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHP 330
+K L ++S GT Y+APE+ T D +S GV+ + G P
Sbjct: 164 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 249
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 250 KKLQPTVRNYVE 261
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 249
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 250 KKLQPTVRNYVE 261
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL- 173
VY + +R +++ +G+G G V A E + + VAIK I+ K++F
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 50
Query: 174 -------------TEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXX 220
TE+E L ++ H I+K+ F A ++V E ++ G
Sbjct: 51 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 109
Query: 221 XXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGI 277
+E + ++ + + A+ YLH + I+HRD+ +N+LL + E + DFG
Sbjct: 110 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHP 330
+K L ++S GT Y+APE+ T D +S GV+ + G P
Sbjct: 164 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 140 TFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 193
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL- 173
VY + +R +++ +G+G G V A E + + VAIK I+ K++F
Sbjct: 2 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 49
Query: 174 -------------TEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXX 220
TE+E L ++ H I+K+ F A ++V E ++ G
Sbjct: 50 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 108
Query: 221 XXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGI 277
+E + ++ + + A+ YLH + I+HRD+ +N+LL + E + DFG
Sbjct: 109 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 162
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHP 330
+K L ++S GT Y+APE+ T D +S GV+ + G P
Sbjct: 163 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 80
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLXGIKH 134
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 190
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 242
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 243 KKLQPTVRNYVE 254
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 120 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LT 175
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
E T YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 176 EPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFL- 173
VY + +R +++ +G+G G V A E + + VAIK I+ K++F
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIK----------IISKRKFAI 50
Query: 174 -------------TEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXX 220
TE+E L ++ H I+K+ F A ++V E ++ G
Sbjct: 51 GSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK 109
Query: 221 XXQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGI 277
+E + ++ + + A+ YLH + I+HRD+ +N+LL + E + DFG
Sbjct: 110 RLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 278 AKFLKPDSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHP 330
+K L ++S GT Y+APE+ T D +S GV+ + G P
Sbjct: 164 SKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG+AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 125 NDFDAQYCIGNGGHGSVYRAELPSG----QVVAIKKFHSPLPSDQIVDKKEFLTEVEALT 180
+F+ +G G +G V+ SG ++ A+K + + TE + L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 181 EIRHRN-IVKL-YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKG-V 237
IR +V L Y F + + L+ +++ G E + + G +
Sbjct: 114 HIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEI 168
Query: 238 ADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK-FLKPDSSNWTEFAGTYG 296
AL +LH I++RDI +N+LLD + DFG++K F+ ++ +F GT
Sbjct: 169 VLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 297 YVAPELAYTMKI--TEKCDVYSFGVLALEVIKGKHP 330
Y+AP++ + D +S GVL E++ G P
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIG 88
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 142
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 198
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLXGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 249
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 250 KKLQPTVRNYVE 261
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 175 EVEALTEIRHRNIVKLYG--FCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMN 232
E++ L +RH+N+++L + + ++V E+ G + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE--KRFPVCQAHG 113
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT--E 290
+ D L YLH IVH+DI NLLL ++ G+A+ L P +++ T
Sbjct: 114 YFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 291 FAGTYGYVAPELAYTMKITE--KCDVYSFGVLALEVIKGKHP 330
G+ + PE+A + K D++S GV + G +P
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKL 190
+ GG VY A+ + SG+ A+K+ L S++ + + EV + ++ H NIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKR----LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ- 90
Query: 191 YGFCSHA----------RHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADA 240
FCS A + FL+ L +G L + + A
Sbjct: 91 --FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK--PDSSNWT--------- 289
+ ++H PPI+HRD+ +NLLL + + DFG A + PD S W+
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WSAQRRALVEE 206
Query: 290 --EFAGTYGYVAPE---LAYTMKITEKCDVYSFGVLALEVIKGKHP 330
T Y PE L I EK D+++ G + + +HP
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 30/263 (11%)
Query: 133 IGNGGHGSVYRA---ELPSGQVVAIKKFHSPLPSDQIVDKK--EFLTEVEALTEIRHRNI 187
+G+G G V+ A E VV K L I D K + E+ L+ + H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 188 VKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHD 247
+K+ + LV E K G L + + + A+ YL
Sbjct: 92 IKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR-- 147
Query: 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK 307
I+HRDI +N+++ +F + DFG A +L+ +T F GT Y APE+
Sbjct: 148 -LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCGTIEYCAPEVLMGNP 205
Query: 308 IT-EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366
+ +++S GV ++ ++P EL+E ++ + P V ++
Sbjct: 206 YRGPELEMWSLGVTLYTLVFEENPF--------------CELEETVEAAI-HPPYLVSKE 250
Query: 367 LRSIVEVVFSCLNESPESRPTMK 389
L S+V L PE R T++
Sbjct: 251 LMSLVS---GLLQPVPERRTTLE 270
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL ++ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 125
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 179
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 180 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 235
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 287
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 288 KKLQPTVRNYVE 299
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 136 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 192
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 193 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIG 89
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKH 143
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S F T Y APE+
Sbjct: 144 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAPEVI 199
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 128 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 184
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 185 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 126 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 182
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 183 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 127 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 183
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 184 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 24/245 (9%)
Query: 133 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V+R + +G A+KK V + E L L+ R IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPR---IVPLY 116
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G + E L+ G E + + + + L YLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 170
Query: 252 IVHRDISSKNLLLDLE-FEAHVADFGIAKFLKPDSSNWTEFAGTY-----GYVAPELAYT 305
I+H D+ + N+LL + A + DFG A L+PD + G Y ++APE+
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 306 MKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
K D++S + L ++ G HP + F + + + E+ P ++++
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAI 290
Query: 364 QEKLR 368
QE LR
Sbjct: 291 QEGLR 295
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NL++D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 80
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 134
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 135 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 190
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 242
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 243 KKLQPTVRNYVE 254
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 81
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 135
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 136 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 191
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 243
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 244 KKLQPTVRNYVE 255
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 81
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 135
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 136 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 191
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 243
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 244 KKLQPTVRNYVE 255
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 166 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 223 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 172 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 228
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 229 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 120 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 176
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 177 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 24/245 (9%)
Query: 133 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V+R + +G A+KK V + E L L+ R IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPR---IVPLY 130
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G + E L+ G E + + + + L YLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 184
Query: 252 IVHRDISSKNLLLDLE-FEAHVADFGIAKFLKPDSSNWTEFAGTY-----GYVAPELAYT 305
I+H D+ + N+LL + A + DFG A L+PD + G Y ++APE+
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 306 MKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
K D++S + L ++ G HP + F + + + E+ P ++++
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAI 304
Query: 364 QEKLR 368
QE LR
Sbjct: 305 QEGLR 309
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 121 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 177
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 178 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 31/208 (14%)
Query: 133 IGNGGHGSVYRAELP-SGQVVAIKKFH------SPLPSDQIVDKKEFLTEVEALTEIRHR 185
+G G + +VY+ + + +VA+K+ +P + + EV L +++H
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA---------IREVSLLKDLKHA 60
Query: 186 NIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIK----GVADAL 241
NIV L+ + LV+E+L + + G M+ +K + L
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYL-------DDCGNIINMHNVKLFLFQLLRGL 113
Query: 242 SYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE 301
+Y H ++HRD+ +NLL++ E +ADFG+A+ + + T Y P+
Sbjct: 114 AYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170
Query: 302 -LAYTMKITEKCDVYSFGVLALEVIKGK 328
L + + + D++ G + E+ G+
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 125
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 179
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 180 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 235
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 287
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 288 KKLQPTVRNYVE 299
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 88
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 142
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 198
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 250
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 251 KKLQPTVRNYVE 262
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 24/245 (9%)
Query: 133 IGNGGHGSVYR-AELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
+G G G V+R + +G A+KK V + E L L+ R IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPR---IVPLY 132
Query: 192 GFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLHHDCFPP 251
G + E L+ G E + + + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 186
Query: 252 IVHRDISSKNLLLDLE-FEAHVADFGIAKFLKPDSSNWTEFAGTY-----GYVAPELAYT 305
I+H D+ + N+LL + A + DFG A L+PD + G Y ++APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 306 MKITEKCDVYSFGVLALEVIKGKHP--RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363
K D++S + L ++ G HP + F + + + E+ P ++++
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAI 306
Query: 364 QEKLR 368
QE LR
Sbjct: 307 QEGLR 311
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 86
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 140
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 141 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 196
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 248
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 249 KKLQPTVRNYVE 260
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 249
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 250 KKLQPTVRNYVE 261
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 122 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 179 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 88
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 142
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 198
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 250
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 251 KKLQPTVRNYVE 262
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIS 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + +LV E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKGK--HP-RDFLSSISSSFLNTDIELDEMLDPRLPAPS 360
M E D++S G + E+++ K P RD++ + E L P
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI--------EQLGTPCPEFM 249
Query: 361 RSVQEKLRSIVE 372
+ +Q +R+ VE
Sbjct: 250 KKLQPTVRNYVE 261
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
++K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 122 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 179 PCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKK------EFLTEVEALTEIR-H 184
+G G H V L + Q A+K I++K+ EVE L + + H
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVK----------IIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
RN+++L F +LV+E ++ G EL S V++ VA AL +L
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFL 127
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGIAKFLKPD-------SSNWTEFAGT 294
H+ I HRD+ +N+L + + + DFG+ +K + + G+
Sbjct: 128 HNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 295 YGYVAPEL--AYTMKIT---EKCDVYSFGVLALEVIKGKHP 330
Y+APE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 133 IGNGGHGSVYRAELPSGQV-VAIKKFHSPLPSD--QIVDKKEFLTEVEALTEIRH--RNI 187
+G+GG GSVY S + VAIK SD ++ + EV L ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 188 VKLYGFCSHARHSFLVYEFLK--RGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
++L + L+ E ++ + +EL S V++ V
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC----- 130
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 186
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
P + + + D ++ GVL E+ G P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSV---YRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189
IG+G G V Y A L VAIKK P +Q K+ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF-QNQTHAKRAY-RELVLMKCVNHKNIIG 87
Query: 190 LYGFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSY 243
L + + ++V E + EL + ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKH 141
Query: 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELA 303
LH I+HRD+ N+++ + + DFG+A+ E Y Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M E D++S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191
IG+G G V A + G VA+KK P +Q K+ + E+ L + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAY-RELVLLKCVNHKNIISLL 89
Query: 192 GFCSHAR------HSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYLH 245
+ + +LV E + EL + ++ + + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLH 143
Query: 246 HDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELA 303
I+HRD+ N+++ + + DFG+A + +N+ T + T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTRYYRAPEVI 197
Query: 304 YTMKITEKCDVYSFGVLALEVIKG 327
M D++S G + E++KG
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 43/249 (17%)
Query: 109 LNFEGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV 167
L F+G ++ + V+ ++++ ++ IG G +G VY A + + + VAIKK + + ++
Sbjct: 14 LYFQGAIIKN--VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMF--EDLI 69
Query: 168 DKKEFLTEVEALTEIRHRNIVKLYGFCS-----HARHSFLVYEFLKRGXXXXXXXXXXXX 222
D K L E+ L ++ I++L+ ++V E
Sbjct: 70 DCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLT 129
Query: 223 QELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282
++ + N++ G ++H I+HRD+ N LL+ + + DFG+A+ +
Sbjct: 130 EQHVKTILYNLLLGE----KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
Query: 283 PDSS-------------------------NWTEFAGTYGYVAPELAYTMK-ITEKCDVYS 316
D T T Y APEL + T D++S
Sbjct: 183 SDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWS 242
Query: 317 FGVLALEVI 325
G + E++
Sbjct: 243 TGCIFAELL 251
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G + L
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLT 112
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 113 EEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKE-----FLTEVEALTEIRHRN 186
IG G G V++A +GQ VA+KK + ++KE L E++ L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 187 IVKLYGFC-------SHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
+V L C + + S +LV++F + + S+ V++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 135
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279
+ L Y+H + I+HRD+ + N+L+ + +ADFG+A+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G + L
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLT 112
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 113 EEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKE-----FLTEVEALTEIRHRN 186
IG G G V++A +GQ VA+KK + ++KE L E++ L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 187 IVKLYGFCSHARHSF--------LVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
+V L C + LV++F + + S+ V++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 135
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279
+ L Y+H + I+HRD+ + N+L+ + +ADFG+A+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G + L
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLT 112
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 113 EEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 112
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 113 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 166
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 167 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 112
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 113 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 166
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 167 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKE-----FLTEVEALTEIRHRN 186
IG G G V++A +GQ VA+KK + ++KE L E++ L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 187 IVKLYGFC-------SHARHS-FLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
+V L C + + S +LV++F + + S+ V++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 135
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279
+ L Y+H + I+HRD+ + N+L+ + +ADFG+A+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G + L
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLT 112
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 113 EEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 233 VIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV---ADFGIAKFLKPDSSNWT 289
+ K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 166 IXKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
Y YVAPE+ K + CD +S GV+ ++ G P
Sbjct: 223 PCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 179 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 234
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 133 IGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKE-----FLTEVEALTEIRHRN 186
IG G G V++A +GQ VA+KK + ++KE L E++ L ++H N
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 77
Query: 187 IVKLYGFCSHARHSF--------LVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVA 238
+V L C + LV++F + + S+ V++ +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 134
Query: 239 DALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279
+ L Y+H + I+HRD+ + N+L+ + +ADFG+A+
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 154 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 209
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 27/169 (15%)
Query: 231 MNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF---EAHVADFGIAKFLKPDSSN 287
+ +IK + + + YLH + IVH D+ +N+LL + + + DFG+++ + +
Sbjct: 134 IRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACE 189
Query: 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSIS-SSFLN-TD 345
E GT Y+APE+ IT D+++ G++A ++ P F+ + ++LN +
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP--FVGEDNQETYLNISQ 247
Query: 346 IELDEMLDPRLPAPSRSVQEKLRSIVEV----VFSCLNESPESRPTMKI 390
+ +D +E S+ ++ + S L ++PE RPT +I
Sbjct: 248 VNVD------------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEI 284
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 122 RATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPL----------PSDQIVDKK- 170
+ ND+ + G + E + A+KK+ L +D+I K
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSK 86
Query: 171 --EFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQE---- 224
+F E++ +T+I++ + G ++ +++YE+++ +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 225 -LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283
+ +IK V ++ SY+H++ I HRD+ N+L+D ++DFG ++++
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 284 DSSNWTEFAGTYGYVAPEL-----AYTMKITEKCDVYSFGV 319
+ GTY ++ PE +Y K D++S G+
Sbjct: 205 KKIKGSR--GTYEFMPPEFFSNESSYN---GAKVDIWSLGI 240
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 186
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 130 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 185
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 166 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 221
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 201
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 201
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 182
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 246 HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 303
H+C ++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 182
Query: 304 YTMKITEKCDVYSFGVLALEVIKGKHP 330
Y V+S G+L +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 299
YLH +++RD+ +NLL+D + V DFG AK +K W GT +A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALA 206
Query: 300 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 38/234 (16%)
Query: 121 VRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEAL 179
V +++ ++ IG G +G VY A + + + VAIKK + + ++D K L E+ L
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITIL 79
Query: 180 TEIRHRNIVKLYGFCS-----HARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVI 234
++ I++LY ++V E +E + N++
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 235 KGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK------------ 282
G +++H I+HRD+ N LL+ + V DFG+A+ +
Sbjct: 140 LGE----NFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192
Query: 283 ------PDSSN----WTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVI 325
P + N T T Y APEL + T+ D++S G + E++
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 167 VDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG 226
V +++ EV L EI+H N++ L+ + L+ E + G E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE-- 113
Query: 227 WSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN-LLLDLEF---EAHVADFGIAKFLK 282
+ +K + + + YLH I H D+ +N +LLD + DFG+A K
Sbjct: 114 -EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--K 167
Query: 283 PDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330
D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 48/281 (17%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKE-FLTEVEALTE 181
A D +G G G VY + + I D +D KE F++E +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG--WSQRMNVIK---- 235
+ H +IVKL G ++++ E G ELG + N +K
Sbjct: 70 LDHPHIVKLIGIIEE-EPTWIIMELYPYG-------------ELGHYLERNKNSLKVLTL 115
Query: 236 -----GVADALSYLHH-DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
+ A++YL +C VHRDI+ +N+L+ + DFG+++++ + ++
Sbjct: 116 VLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYY 169
Query: 290 EFAGT---YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTD 345
+ + T +++PE + T DV+ F V E++ GK P +L N D
Sbjct: 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-------NKD 222
Query: 346 IELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRP 386
+ RLP P + ++ C + P RP
Sbjct: 223 VIGVLEKGDRLPKPDLCPP----VLYTLMTRCWDYDPSDRP 259
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 44/279 (15%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKE-FLTEVEALTE 181
A D +G G G VY + + I D +D KE F++E +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG--WSQRMNVIK---- 235
+ H +IVKL G ++++ E G ELG + N +K
Sbjct: 82 LDHPHIVKLIGIIEE-EPTWIIMELYPYG-------------ELGHYLERNKNSLKVLTL 127
Query: 236 -----GVADALSYLHH-DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK-PDSSNW 288
+ A++YL +C VHRDI+ +N+L+ + DFG++++++ D
Sbjct: 128 VLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 183
Query: 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIE 347
+ +++PE + T DV+ F V E++ GK P +L N D+
Sbjct: 184 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-------NKDVI 236
Query: 348 LDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRP 386
RLP P + ++ C + P RP
Sbjct: 237 GVLEKGDRLPKPDLCPP----VLYTLMTRCWDYDPSDRP 271
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 48/281 (17%)
Query: 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKE-FLTEVEALTE 181
A D +G G G VY + + I D +D KE F++E +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 182 IRHRNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELG--WSQRMNVIK---- 235
+ H +IVKL G ++++ E G ELG + N +K
Sbjct: 66 LDHPHIVKLIGIIEE-EPTWIIMELYPYG-------------ELGHYLERNKNSLKVLTL 111
Query: 236 -----GVADALSYLHH-DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289
+ A++YL +C VHRDI+ +N+L+ + DFG+++++ + ++
Sbjct: 112 VLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYY 165
Query: 290 EFAGT---YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTD 345
+ + T +++PE + T DV+ F V E++ GK P +L N D
Sbjct: 166 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-------NKD 218
Query: 346 IELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRP 386
+ RLP P + ++ C + P RP
Sbjct: 219 VIGVLEKGDRLPKPDLCPP----VLYTLMTRCWDYDPSDRP 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 252 IVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKIT 309
++HRDI +N+L+DL E + DFG LK + +T+F GT Y PE + Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 310 EKCDVYSFGVLALEVIKGKHP 330
V+S G+L +++ G P
Sbjct: 189 RSAAVWSLGILLYDMVCGDIP 209
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 133 IGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKK------EFLTEVEALTEIR-H 184
+G G H V L + Q A+K I++K+ EVE L + + H
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVK----------IIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 185 RNIVKLYGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWSQRMNVIKGVADALSYL 244
RN+++L F +LV+E ++ G EL S V++ VA AL +L
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFL 127
Query: 245 HHDCFPPIVHRDISSKNLLLDLEFE---AHVADFGIAKFLKPD-------SSNWTEFAGT 294
H+ I HRD+ +N+L + + + DF + +K + + G+
Sbjct: 128 HNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 295 YGYVAPEL--AYTMKIT---EKCDVYSFGVLALEVIKGKHP 330
Y+APE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
NDF IG GG G VY + +G++ A+K +DKK + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----------CLDKKRIKMKQGETLALN 238
Query: 184 HRNIVKL-------------YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS-Q 229
R ++ L Y F + + SF++ + + G E
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 230 RMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA---KFLKPDSS 286
+I G L ++H+ +V+RD+ N+LLD ++D G+A KP +S
Sbjct: 298 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 287 NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHP 330
GT+GY+APE L + D +S G + ++++G P
Sbjct: 351 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
NDF IG GG G VY + +G++ A+K +DKK + +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----------CLDKKRIKMKQGETLALN 237
Query: 184 HRNIVKL-------------YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS-Q 229
R ++ L Y F + + SF++ + + G E
Sbjct: 238 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 296
Query: 230 RMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA---KFLKPDSS 286
+I G L ++H+ +V+RD+ N+LLD ++D G+A KP +S
Sbjct: 297 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 349
Query: 287 NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHP 330
GT+GY+APE L + D +S G + ++++G P
Sbjct: 350 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR 183
NDF IG GG G VY + +G++ A+K +DKK + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----------CLDKKRIKMKQGETLALN 238
Query: 184 HRNIVKL-------------YGFCSHARHSFLVYEFLKRGXXXXXXXXXXXXQELGWS-Q 229
R ++ L Y F + + SF++ + + G E
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 230 RMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL---KPDSS 286
+I G L ++H+ +V+RD+ N+LLD ++D G+A KP +S
Sbjct: 298 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 287 NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHP 330
GT+GY+APE L + D +S G + ++++G P
Sbjct: 351 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,355,249
Number of Sequences: 62578
Number of extensions: 458030
Number of successful extensions: 3467
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 1219
Number of HSP's gapped (non-prelim): 1137
length of query: 397
length of database: 14,973,337
effective HSP length: 101
effective length of query: 296
effective length of database: 8,652,959
effective search space: 2561275864
effective search space used: 2561275864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)